BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10745
         (197 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|195173607|ref|XP_002027579.1| GL18401 [Drosophila persimilis]
 gi|194114491|gb|EDW36534.1| GL18401 [Drosophila persimilis]
          Length = 871

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 238 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 297

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 298 SVSSINRIV 306



 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 176 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 235

Query: 171 LSR 173
           LSR
Sbjct: 236 LSR 238


>gi|195064058|ref|XP_001996488.1| GH23966 [Drosophila grimshawi]
 gi|193892034|gb|EDV90900.1| GH23966 [Drosophila grimshawi]
          Length = 862

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 234 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 293

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 294 SVSSINRIV 302



 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 172 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 231

Query: 171 LSR 173
           LSR
Sbjct: 232 LSR 234


>gi|195402209|ref|XP_002059699.1| GJ13730 [Drosophila virilis]
 gi|194155913|gb|EDW71097.1| GJ13730 [Drosophila virilis]
          Length = 863

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 223 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 282

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 283 SVSSINRIV 291



 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 161 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 220

Query: 171 LSR 173
           LSR
Sbjct: 221 LSR 223


>gi|345494898|ref|XP_001604502.2| PREDICTED: hypothetical protein LOC100120909 [Nasonia
          vitripennis]
          Length = 536

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 68/70 (97%)

Query: 13 RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
          RRYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNV
Sbjct: 28 RRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNV 87

Query: 73 PSVSSINRYI 82
          PSVSSINR +
Sbjct: 88 PSVSSINRIV 97


>gi|195134006|ref|XP_002011429.1| GI14046 [Drosophila mojavensis]
 gi|193912052|gb|EDW10919.1| GI14046 [Drosophila mojavensis]
          Length = 965

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 281 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 340

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 341 SVSSINRIV 349



 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 219 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 278

Query: 171 LSR 173
           LSR
Sbjct: 279 LSR 281


>gi|322791121|gb|EFZ15683.1| hypothetical protein SINV_00870 [Solenopsis invicta]
          Length = 173

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 66/71 (92%), Positives = 68/71 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 87  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 146

Query: 74  SVSSINRYITY 84
           SVSSINRY  Y
Sbjct: 147 SVSSINRYRNY 157



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 33  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 87


>gi|328712072|ref|XP_003244722.1| PREDICTED: hypothetical protein LOC100159241 isoform 2
           [Acyrthosiphon pisum]
          Length = 651

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 68/69 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVATAPVVD+IA+YKRENPTMFAWEIRDRLLAEG+C+QDNVP
Sbjct: 116 RYYETGSFKAGVIGGSKPKVATAPVVDSIANYKRENPTMFAWEIRDRLLAEGVCTQDNVP 175

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 176 SVSSINRIV 184



 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 54/55 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG RPCDISRQLRVSHGCVSKILSR
Sbjct: 62  HGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGTRPCDISRQLRVSHGCVSKILSR 116


>gi|254733070|gb|ACT79980.1| shaven [Nasonia vitripennis]
          Length = 233

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 68/70 (97%)

Query: 13 RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
          RRYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNV
Sbjct: 28 RRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNV 87

Query: 73 PSVSSINRYI 82
          PSVSSINR +
Sbjct: 88 PSVSSINRIV 97


>gi|270004886|gb|EFA01334.1| shaven [Tribolium castaneum]
          Length = 472

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 91  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 150

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 151 SVSSINRIV 159



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 56/57 (98%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 35  KRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 91


>gi|194913410|ref|XP_001982689.1| GG16406 [Drosophila erecta]
 gi|190647905|gb|EDV45208.1| GG16406 [Drosophila erecta]
          Length = 842

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 229 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 288

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 289 SVSSINRIV 297



 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 167 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 226

Query: 171 LSR 173
           LSR
Sbjct: 227 LSR 229


>gi|195469427|ref|XP_002099639.1| GE14566 [Drosophila yakuba]
 gi|194185740|gb|EDW99351.1| GE14566 [Drosophila yakuba]
          Length = 847

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 232 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 291

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 292 SVSSINRIV 300



 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 170 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 229

Query: 171 LSR 173
           LSR
Sbjct: 230 LSR 232


>gi|189235370|ref|XP_968041.2| PREDICTED: similar to shaven CG11049-PA, partial [Tribolium
           castaneum]
          Length = 442

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 61  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRIV 129



 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 7   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 61


>gi|328712070|ref|XP_001943420.2| PREDICTED: hypothetical protein LOC100159241 isoform 1
           [Acyrthosiphon pisum]
          Length = 645

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 68/69 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVATAPVVD+IA+YKRENPTMFAWEIRDRLLAEG+C+QDNVP
Sbjct: 109 RYYETGSFKAGVIGGSKPKVATAPVVDSIANYKRENPTMFAWEIRDRLLAEGVCTQDNVP 168

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 169 SVSSINRIV 177



 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 54/55 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG RPCDISRQLRVSHGCVSKILSR
Sbjct: 55  HGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGTRPCDISRQLRVSHGCVSKILSR 109


>gi|198462147|ref|XP_002135676.1| sparkling shaven [Drosophila pseudoobscura pseudoobscura]
 gi|198142524|gb|EDY71260.1| sparkling shaven [Drosophila pseudoobscura pseudoobscura]
          Length = 807

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 238 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 297

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 298 SVSSINRIV 306



 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 176 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 235

Query: 171 LSR 173
           LSR
Sbjct: 236 LSR 238


>gi|45551190|ref|NP_726645.3| shaven, isoform C [Drosophila melanogaster]
 gi|45444828|gb|AAN06579.3| shaven, isoform C [Drosophila melanogaster]
          Length = 647

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|62473211|ref|NP_001014698.1| shaven, isoform G [Drosophila melanogaster]
 gi|61699733|gb|AAX53599.1| shaven, isoform G [Drosophila melanogaster]
          Length = 628

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|62473244|ref|NP_001014701.1| shaven, isoform D [Drosophila melanogaster]
 gi|61699730|gb|AAX53596.1| shaven, isoform D [Drosophila melanogaster]
          Length = 680

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|195450779|ref|XP_002072629.1| GK13586 [Drosophila willistoni]
 gi|194168714|gb|EDW83615.1| GK13586 [Drosophila willistoni]
          Length = 935

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/69 (94%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 282 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 341

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 342 SVSSINRIV 350



 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/59 (94%), Positives = 56/59 (94%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 224 AGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 282


>gi|281359598|ref|NP_001162834.1| shaven, isoform I [Drosophila melanogaster]
 gi|272482453|gb|ACZ95103.1| shaven, isoform I [Drosophila melanogaster]
          Length = 491

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 74  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 133

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 134 SVSSINRIV 142



 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 74


>gi|195564356|ref|XP_002105786.1| GD24421 [Drosophila simulans]
 gi|194201662|gb|EDX15238.1| GD24421 [Drosophila simulans]
          Length = 680

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|2394243|gb|AAB70249.1| paired box protein [Drosophila melanogaster]
          Length = 472

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 55  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 114

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 115 SVSSINRIV 123



 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 1   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 55


>gi|194770468|ref|XP_001967315.1| GF20618 [Drosophila ananassae]
 gi|190617040|gb|EDV32564.1| GF20618 [Drosophila ananassae]
          Length = 554

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE IC+QDNVP
Sbjct: 214 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAETICTQDNVP 273

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 274 SVSSINRIV 282



 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 152 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 211

Query: 171 LSR 173
           LSR
Sbjct: 212 LSR 214


>gi|332019878|gb|EGI60339.1| Paired box protein Pax-2-B [Acromyrmex echinatior]
          Length = 283

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/68 (94%), Positives = 67/68 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 87  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 146

Query: 74  SVSSINRY 81
           SVSSINR+
Sbjct: 147 SVSSINRF 154



 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 33  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 87


>gi|307175636|gb|EFN65545.1| Paired box protein Pax-2-B [Camponotus floridanus]
          Length = 190

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 69/74 (93%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 87  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 146

Query: 74  SVSSINRYITYVPI 87
           SVSSINR I  + +
Sbjct: 147 SVSSINRGIQVLSL 160



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 33  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 87


>gi|62473199|ref|NP_001014697.1| shaven, isoform H [Drosophila melanogaster]
 gi|61699731|gb|AAX53597.1| shaven, isoform H [Drosophila melanogaster]
          Length = 842

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|45549241|ref|NP_524633.3| shaven, isoform A [Drosophila melanogaster]
 gi|2624959|gb|AAB86598.1| sparkling protein [Drosophila melanogaster]
 gi|45444827|gb|AAF59385.3| shaven, isoform A [Drosophila melanogaster]
          Length = 844

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|62473220|ref|NP_001014699.1| shaven, isoform F [Drosophila melanogaster]
 gi|61699732|gb|AAX53598.1| shaven, isoform F [Drosophila melanogaster]
          Length = 792

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/69 (92%), Positives = 66/69 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|242024453|ref|XP_002432642.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
 gi|212518112|gb|EEB19904.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
          Length = 102

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/67 (97%), Positives = 66/67 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 36  RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVP 95

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 96  SVSSINR 102



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/36 (97%), Positives = 36/36 (100%)

Query: 138 VVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +VRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 1   MVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 36


>gi|357619664|gb|EHJ72146.1| hypothetical protein KGM_12316 [Danaus plexippus]
          Length = 144

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 66/67 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKRENPTMFAWEIRDRLL+EGICSQDNVP
Sbjct: 78  RYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKRENPTMFAWEIRDRLLSEGICSQDNVP 137

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 138 SVSSINR 144



 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/52 (98%), Positives = 52/52 (100%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 27  VNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 78


>gi|307199871|gb|EFN80268.1| Paired box protein Pax-2-B [Harpegnathos saltator]
          Length = 94

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/67 (95%), Positives = 66/67 (98%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 28 RYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 87

Query: 74 SVSSINR 80
          SVSSINR
Sbjct: 88 SVSSINR 94



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query: 146 LAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +AH+G RPCDISRQLRVSHGCVSKILSR
Sbjct: 1   MAHSGTRPCDISRQLRVSHGCVSKILSR 28


>gi|350417103|ref|XP_003491258.1| PREDICTED: hypothetical protein LOC100744373 [Bombus impatiens]
          Length = 557

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 89  RYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRIV 157



 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 61/67 (91%), Gaps = 3/67 (4%)

Query: 110 RQRI---VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           RQ+I   +   SHGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGC
Sbjct: 23  RQKIGWPILFYSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGC 82

Query: 167 VSKILSR 173
           VSKILSR
Sbjct: 83  VSKILSR 89


>gi|340713172|ref|XP_003395121.1| PREDICTED: hypothetical protein LOC100647018 [Bombus terrestris]
          Length = 558

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 89  RYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRIV 157



 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/56 (98%), Positives = 56/56 (100%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SHGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 34  SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 89


>gi|328777587|ref|XP_001122481.2| PREDICTED: paired box protein Pax-2a-like [Apis mellifera]
          Length = 131

 Score =  132 bits (332), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 63/67 (94%), Positives = 66/67 (98%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 65  RYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 124

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 125 SVSSINR 131



 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 63/73 (86%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           +R  ++  R HGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVS
Sbjct: 1   MRVFLLGFRGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVS 60

Query: 169 KILSRESNLHNYR 181
           KILSR     +++
Sbjct: 61  KILSRYYETGSFK 73


>gi|380015462|ref|XP_003691720.1| PREDICTED: uncharacterized protein LOC100864042 [Apis florea]
          Length = 623

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 63/69 (91%), Positives = 67/69 (97%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YKR+NPTMFAWEIRDRLLAEGICSQDNVP
Sbjct: 120 RYYETGSFKAGVIGGSKPKVATPPVVEAIANYKRDNPTMFAWEIRDRLLAEGICSQDNVP 179

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 180 SVSSINRIV 188



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/57 (94%), Positives = 56/57 (98%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + HGGVNQLGGVFVNGRPLPDVVRQRIVELAH+GVRPCDISRQLRVSHGCVSKILSR
Sbjct: 64  KRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHSGVRPCDISRQLRVSHGCVSKILSR 120


>gi|195355690|ref|XP_002044323.1| GM13025 [Drosophila sechellia]
 gi|194130610|gb|EDW52653.1| GM13025 [Drosophila sechellia]
          Length = 839

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT+PV  AIA+YKRENPTMFAWEIRDRLLAE ICSQDNVP
Sbjct: 230 RYYETGSFKAGVIGGSKPKVATSPVEYAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 290 SVSSINRIV 298



 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/63 (88%), Positives = 58/63 (92%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 168 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 227

Query: 171 LSR 173
           LSR
Sbjct: 228 LSR 230


>gi|321477978|gb|EFX88936.1| hypothetical protein DAPPUDRAFT_311028 [Daphnia pulex]
          Length = 162

 Score =  129 bits (325), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/67 (92%), Positives = 64/67 (95%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT  VVDAIA YKRENPTMFAWEIRDRLLAEGIC+Q+NVP
Sbjct: 83  RYYETGSFKAGVIGGSKPKVATPHVVDAIADYKRENPTMFAWEIRDRLLAEGICNQENVP 142

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 143 SVSSINR 149



 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR
Sbjct: 29  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 83


>gi|157128230|ref|XP_001661355.1| paired box protein pax-6 [Aedes aegypti]
 gi|108882242|gb|EAT46467.1| AAEL002348-PA [Aedes aegypti]
          Length = 593

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 64/69 (92%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YK +NPTMFAWEIRD+LLA+GIC  DNVP
Sbjct: 151 RYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKLQNPTMFAWEIRDKLLADGICVHDNVP 210

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 211 SVSSINRIV 219



 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG+RPCDISRQLRVSHGCVSKILSR
Sbjct: 97  HGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGIRPCDISRQLRVSHGCVSKILSR 151


>gi|170040706|ref|XP_001848131.1| paired box protein pax-6 [Culex quinquefasciatus]
 gi|167864314|gb|EDS27697.1| paired box protein pax-6 [Culex quinquefasciatus]
          Length = 527

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 64/69 (92%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVVDAIA+YK +NPTMFAWEIRD+LLA+GIC  DNVP
Sbjct: 61  RYYETGSFKAGVIGGSKPKVATPPVVDAIAAYKLQNPTMFAWEIRDKLLADGICVHDNVP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRIV 129



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/57 (94%), Positives = 56/57 (98%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG+RPCDISRQLRVSHGCVSKILSR
Sbjct: 5   RRHGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGIRPCDISRQLRVSHGCVSKILSR 61


>gi|312379688|gb|EFR25884.1| hypothetical protein AND_08376 [Anopheles darlingi]
          Length = 601

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/69 (84%), Positives = 64/69 (92%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YK +NPTMFAWEIRD+LLA+GIC  DNVP
Sbjct: 69  RYYETGSFKAGVIGGSKPKVATPPVVEAIAAYKLQNPTMFAWEIRDKLLADGICVHDNVP 128

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 129 SVSSINRIV 137



 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/67 (85%), Positives = 61/67 (91%), Gaps = 3/67 (4%)

Query: 110 RQRI---VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           R+RI   V+   HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG+RPCDISRQLRVSHGC
Sbjct: 3   RKRINPLVSHLRHGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGIRPCDISRQLRVSHGC 62

Query: 167 VSKILSR 173
           VSKILSR
Sbjct: 63  VSKILSR 69


>gi|347963077|ref|XP_311100.5| AGAP000057-PA [Anopheles gambiae str. PEST]
 gi|333467371|gb|EAA06142.5| AGAP000057-PA [Anopheles gambiae str. PEST]
          Length = 551

 Score =  125 bits (314), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 64/69 (92%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGSFKAGVIGGSKPKVAT PVV+AIA+YK +NPTMFAWEIRD+LLA+GIC  DNVP
Sbjct: 79  RYYETGSFKAGVIGGSKPKVATPPVVEAIAAYKLQNPTMFAWEIRDKLLADGICVHDNVP 138

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 139 SVSSINRIV 147



 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 55/55 (100%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPD+VRQRIVELAHNG+RPCDISRQLRVSHGCVSKILSR
Sbjct: 25  HGGVNQLGGVFVNGRPLPDLVRQRIVELAHNGIRPCDISRQLRVSHGCVSKILSR 79


>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
          Length = 571

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 63/74 (85%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  R+YETGS K GVIGGSKPKVAT PVV+ IA YKR NPTMFAWEIRDRLL+EG+CS
Sbjct: 60  ILC--RFYETGSIKPGVIGGSKPKVATGPVVNKIAEYKRNNPTMFAWEIRDRLLSEGVCS 117

Query: 69  QDNVPSVSSINRYI 82
            DNVPSVSSINR +
Sbjct: 118 TDNVPSVSSINRIV 131



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 53/57 (92%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + HGGVNQLGG+FVNGRPLPDVVR RIV+LA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 7   QGHGGVNQLGGLFVNGRPLPDVVRSRIVDLAQSGVRPCDISRQLRVSHGCVSKILCR 63


>gi|263359638|gb|ACY70474.1| hypothetical protein DVIR88_6g0011 [Drosophila virilis]
          Length = 832

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 59/66 (89%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI
Sbjct: 161 QGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 220

Query: 171 LSRESN 176
           LSR  N
Sbjct: 221 LSRREN 226



 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/37 (91%), Positives = 36/37 (97%)

Query: 46  KRENPTMFAWEIRDRLLAEGICSQDNVPSVSSINRYI 82
           +RENPTMFAWEIRDRLLAEGICSQDNVPSVSSINR +
Sbjct: 223 RRENPTMFAWEIRDRLLAEGICSQDNVPSVSSINRIV 259


>gi|335302115|ref|XP_003133216.2| PREDICTED: paired box protein Pax-2 isoform 1 [Sus scrofa]
          Length = 396

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|34878709|ref|NP_003979.2| paired box protein Pax-2 isoform c [Homo sapiens]
 gi|332834859|ref|XP_003312778.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|438650|gb|AAA36417.1| paired box protein [Homo sapiens]
 gi|119570197|gb|EAW49812.1| paired box gene 2, isoform CRA_d [Homo sapiens]
          Length = 396

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|124054604|gb|ABM89503.1| Pax2 [Scyliorhinus canicula]
          Length = 299

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D+VP
Sbjct: 47  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDSVP 106

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 107 SVSSINRII 115



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/47 (95%), Positives = 45/47 (95%)

Query: 127 GVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   GVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 47


>gi|395828266|ref|XP_003787306.1| PREDICTED: paired box protein Pax-2 isoform 4 [Otolemur garnettii]
          Length = 396

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|391341966|ref|XP_003745295.1| PREDICTED: paired box protein Pax-2-B-like [Metaseiulus
           occidentalis]
          Length = 160

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 62/67 (92%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVDAIA+YK++NPTMFAWEIRDRLLA+G+C QDN+P
Sbjct: 94  RYYETGSIRPGVIGGSKPKVATPKVVDAIANYKKQNPTMFAWEIRDRLLADGVCDQDNIP 153

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 154 SVSSINR 160



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/60 (91%), Positives = 56/60 (93%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             S+SHGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 35  TTSQSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 94


>gi|410975914|ref|XP_003994372.1| PREDICTED: paired box protein Pax-2 isoform 5 [Felis catus]
          Length = 397

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|359080047|ref|XP_003587920.1| PREDICTED: paired box protein Pax-2 [Bos taurus]
          Length = 402

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|355562710|gb|EHH19304.1| hypothetical protein EGK_19984 [Macaca mulatta]
 gi|355783029|gb|EHH64950.1| hypothetical protein EGM_18284 [Macaca fascicularis]
          Length = 419

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|3025754|gb|AAC12734.1| paired box protein Pax-2 beta isoform [Branchiostoma floridae]
          Length = 438

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 60/70 (85%)

Query: 13  RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RRYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D V
Sbjct: 76  RRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTV 135

Query: 73  PSVSSINRYI 82
           PSVSSINR +
Sbjct: 136 PSVSSINRIV 145



 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 49/52 (94%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGV+VNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 26  VNQLGGVYVNGRPLPDVVRHRIVELAHQGVRPCDISRQLRVSHGCVSKILRR 77


>gi|348578465|ref|XP_003475003.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2-like
           [Cavia porcellus]
          Length = 390

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|3025752|gb|AAC12733.1| paired box protein Pax-2 alpha isoform [Branchiostoma floridae]
          Length = 445

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 60/70 (85%)

Query: 13  RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RRYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D V
Sbjct: 76  RRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTV 135

Query: 73  PSVSSINRYI 82
           PSVSSINR +
Sbjct: 136 PSVSSINRIV 145



 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 49/52 (94%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGV+VNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 26  VNQLGGVYVNGRPLPDVVRHRIVELAHQGVRPCDISRQLRVSHGCVSKILRR 77


>gi|2765057|emb|CAA71206.1| paired box protein [Xenopus laevis]
          Length = 462

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|334350735|gb|AEG77356.1| paired box 2 transcript variant 4 [Columba livia]
          Length = 324

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 69  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 69


>gi|117650664|gb|ABK54277.1| Pax-2 [Branchiostoma belcheri]
          Length = 445

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 60/70 (85%)

Query: 13  RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RRYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D V
Sbjct: 76  RRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTV 135

Query: 73  PSVSSINRYI 82
           PSVSSINR +
Sbjct: 136 PSVSSINRIV 145



 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 49/52 (94%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGV+VNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 26  VNQLGGVYVNGRPLPDVVRHRIVELAHQGVRPCDISRQLRVSHGCVSKILRR 77


>gi|148880126|sp|O57682.2|PAX2B_XENLA RecName: Full=Paired box protein Pax-2-B; Short=xPax-2b
          Length = 494

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|281352041|gb|EFB27625.1| hypothetical protein PANDA_001742 [Ailuropoda melanoleuca]
          Length = 412

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 63  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 122

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 123 SVSSINRII 131



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 9   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 63


>gi|5815455|gb|AAD52680.1|AF179300_1 Pax-2 protein [Xenopus laevis]
          Length = 492

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|449505115|ref|XP_004174846.1| PREDICTED: paired box protein Pax-2-A [Taeniopygia guttata]
          Length = 326

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|345307674|ref|XP_001513168.2| PREDICTED: paired box protein Pax-2 [Ornithorhynchus anatinus]
          Length = 455

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRVI 139



 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|440912433|gb|ELR62003.1| Paired box protein Pax-2 [Bos grunniens mutus]
          Length = 425

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 75  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 134

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 135 SVSSINRII 143



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/66 (83%), Positives = 57/66 (86%)

Query: 108 VVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCV 167
           VV    ++   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCV
Sbjct: 10  VVSFSCLSPAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCV 69

Query: 168 SKILSR 173
           SKIL R
Sbjct: 70  SKILGR 75


>gi|34878716|ref|NP_003980.2| paired box protein Pax-2 isoform d [Homo sapiens]
          Length = 408

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395828268|ref|XP_003787307.1| PREDICTED: paired box protein Pax-2 isoform 5 [Otolemur garnettii]
          Length = 409

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|449505111|ref|XP_004174845.1| PREDICTED: paired box protein Pax-2-A [Taeniopygia guttata]
          Length = 354

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|148880125|sp|O57685.2|PAX2A_XENLA RecName: Full=Paired box protein Pax-2-A; Short=xPax-2a
          Length = 497

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|34878703|ref|NP_003981.2| paired box protein Pax-2 isoform e [Homo sapiens]
 gi|146327639|gb|AAI41453.1| Paired box 2 [synthetic construct]
 gi|151556558|gb|AAI48711.1| Paired box 2 [synthetic construct]
          Length = 431

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|359323187|ref|XP_851539.3| PREDICTED: paired box protein Pax-2 [Canis lupus familiaris]
          Length = 397

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 69  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 69


>gi|224052465|ref|XP_002197955.1| PREDICTED: paired box protein Pax-2-A isoform 2 [Taeniopygia
           guttata]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|2765055|emb|CAA71205.1| paired box protein [Xenopus laevis]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|334350729|gb|AEG77353.1| paired box 2 transcript variant 1 [Columba livia]
          Length = 392

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 69  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 69


>gi|291404654|ref|XP_002718701.1| PREDICTED: paired box protein 2-like isoform 1 [Oryctolagus
           cuniculus]
          Length = 409

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|296221020|ref|XP_002756573.1| PREDICTED: paired box protein Pax-2 isoform 1 [Callithrix jacchus]
 gi|297301676|ref|XP_001108620.2| PREDICTED: paired box protein Pax-2 isoform 1 [Macaca mulatta]
 gi|297490872|ref|XP_002698478.1| PREDICTED: paired box protein Pax-2 isoform 1 [Bos taurus]
 gi|332834861|ref|XP_003312777.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|335302117|ref|XP_003359380.1| PREDICTED: paired box protein Pax-2 isoform 5 [Sus scrofa]
 gi|397510271|ref|XP_003825523.1| PREDICTED: paired box protein Pax-2 isoform 2 [Pan paniscus]
 gi|403259708|ref|XP_003922344.1| PREDICTED: paired box protein Pax-2 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|410975912|ref|XP_003994371.1| PREDICTED: paired box protein Pax-2 isoform 4 [Felis catus]
 gi|119570194|gb|EAW49809.1| paired box gene 2, isoform CRA_a [Homo sapiens]
 gi|296472774|tpg|DAA14889.1| TPA: paired box protein 2-like isoform 1 [Bos taurus]
 gi|431838899|gb|ELK00828.1| Paired box protein Pax-2 [Pteropus alecto]
          Length = 409

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395828264|ref|XP_003787305.1| PREDICTED: paired box protein Pax-2 isoform 3 [Otolemur garnettii]
          Length = 432

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|291404656|ref|XP_002718702.1| PREDICTED: paired box protein 2-like isoform 2 [Oryctolagus
           cuniculus]
          Length = 432

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|296221022|ref|XP_002756574.1| PREDICTED: paired box protein Pax-2 isoform 2 [Callithrix jacchus]
 gi|297301678|ref|XP_001108667.2| PREDICTED: paired box protein Pax-2 isoform 2 [Macaca mulatta]
 gi|297490874|ref|XP_002698479.1| PREDICTED: paired box protein Pax-2 isoform 2 [Bos taurus]
 gi|332834863|ref|XP_003312779.1| PREDICTED: paired box protein Pax-2 [Pan troglodytes]
 gi|335302113|ref|XP_003359379.1| PREDICTED: paired box protein Pax-2 isoform 4 [Sus scrofa]
 gi|397510273|ref|XP_003825524.1| PREDICTED: paired box protein Pax-2 isoform 3 [Pan paniscus]
 gi|403259706|ref|XP_003922343.1| PREDICTED: paired box protein Pax-2 isoform 3 [Saimiri boliviensis
           boliviensis]
 gi|410975910|ref|XP_003994370.1| PREDICTED: paired box protein Pax-2 isoform 3 [Felis catus]
 gi|119570200|gb|EAW49815.1| paired box gene 2, isoform CRA_g [Homo sapiens]
 gi|296472775|tpg|DAA14890.1| TPA: paired box protein 2-like isoform 2 [Bos taurus]
          Length = 432

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|334350733|gb|AEG77355.1| paired box 2 transcript variant 3 [Columba livia]
          Length = 352

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 69  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 69


>gi|334314358|ref|XP_003340030.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2-like
           [Monodelphis domestica]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|260837575|ref|XP_002613740.1| paired box protein [Branchiostoma floridae]
 gi|229299129|gb|EEN69749.1| paired box protein [Branchiostoma floridae]
          Length = 453

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 59/68 (86%)

Query: 13  RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RRYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D V
Sbjct: 76  RRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTV 135

Query: 73  PSVSSINR 80
           PSVSSINR
Sbjct: 136 PSVSSINR 143



 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 49/52 (94%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGV+VNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 26  VNQLGGVYVNGRPLPDVVRHRIVELAHQGVRPCDISRQLRVSHGCVSKILRR 77


>gi|45382169|ref|NP_990124.1| paired box protein Pax-2 [Gallus gallus]
 gi|6683012|dbj|BAA88987.1| paired-box containing protein Pax-2 [Gallus gallus]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|432113065|gb|ELK35643.1| Paired box protein Pax-2 [Myotis davidii]
          Length = 664

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|326537335|ref|NP_035167.4| paired box protein Pax-2 [Mus musculus]
 gi|152012463|gb|AAI50485.1| Pax2 protein [Mus musculus]
 gi|157279304|gb|AAI48233.1| Pax2 protein [Mus musculus]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|426365948|ref|XP_004050028.1| PREDICTED: paired box protein Pax-2 [Gorilla gorilla gorilla]
          Length = 441

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 75  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 134

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 135 SVSSINRII 143



 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 21  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 75


>gi|354500707|ref|XP_003512439.1| PREDICTED: paired box protein Pax-2-like [Cricetulus griseus]
          Length = 633

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 95  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 154

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 155 SVSSINRII 163



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 41  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 95


>gi|18859205|ref|NP_571715.1| paired box gene 2b [Danio rerio]
 gi|3420031|gb|AAC31811.1| transcription factor [Danio rerio]
 gi|190336756|gb|AAI62214.1| Paired box gene 2b [Danio rerio]
          Length = 386

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|291404658|ref|XP_002718703.1| PREDICTED: paired box protein 2-like isoform 3 [Oryctolagus
           cuniculus]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|297301680|ref|XP_001108817.2| PREDICTED: paired box protein Pax-2 isoform 5 [Macaca mulatta]
 gi|297490876|ref|XP_002698480.1| PREDICTED: paired box protein Pax-2 isoform 3 [Bos taurus]
 gi|332834855|ref|XP_001168808.2| PREDICTED: paired box protein Pax-2 isoform 5 [Pan troglodytes]
 gi|335302111|ref|XP_003359378.1| PREDICTED: paired box protein Pax-2 isoform 3 [Sus scrofa]
 gi|410975906|ref|XP_003994368.1| PREDICTED: paired box protein Pax-2 isoform 1 [Felis catus]
 gi|119570198|gb|EAW49813.1| paired box gene 2, isoform CRA_e [Homo sapiens]
 gi|296472776|tpg|DAA14891.1| TPA: paired box protein 2-like isoform 3 [Bos taurus]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|2765063|emb|CAA71209.1| paired box protein [Xenopus laevis]
          Length = 354

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395828262|ref|XP_003787304.1| PREDICTED: paired box protein Pax-2 isoform 2 [Otolemur garnettii]
          Length = 394

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|344248142|gb|EGW04246.1| Paired box protein Pax-2 [Cricetulus griseus]
          Length = 503

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 102 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 161

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 162 SVSSINRII 170



 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 66/103 (64%), Gaps = 8/103 (7%)

Query: 71  NVPSVSSINRYITYVPIGHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFV 130
             P  S I   + +    HG     G +  +G P P            HGGVNQLGGVFV
Sbjct: 8   KAPERSHIQSLMMFKAYSHGFDLPSGYMAASGFPPPKKA--------GHGGVNQLGGVFV 59

Query: 131 NGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           NGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 60  NGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 102


>gi|119570196|gb|EAW49811.1| paired box gene 2, isoform CRA_c [Homo sapiens]
          Length = 399

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|205371810|sp|P32114.2|PAX2_MOUSE RecName: Full=Paired box protein Pax-2
          Length = 414

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|157823605|ref|NP_001099831.1| paired box protein Pax-2 [Rattus norvegicus]
 gi|149040253|gb|EDL94291.1| paired box gene 2 (predicted) [Rattus norvegicus]
          Length = 416

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|148709990|gb|EDL41936.1| paired box gene 2 [Mus musculus]
          Length = 416

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|395741954|ref|XP_003780401.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2 [Pongo
           abelii]
          Length = 640

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|37723146|gb|AAN77899.1| paired box transcription factor [Homo sapiens]
          Length = 308

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 75  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 134

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 135 SVSSINRII 143



 Score =  112 bits (279), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 21  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 75


>gi|295844823|ref|NP_001171523.1| paired box protein Pax-2 [Ovis aries]
 gi|390473030|ref|XP_003734556.1| PREDICTED: paired box protein Pax-2 [Callithrix jacchus]
 gi|403259702|ref|XP_003922341.1| PREDICTED: paired box protein Pax-2 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|208966986|dbj|BAG73507.1| paired box 2 [synthetic construct]
 gi|295016251|emb|CBI70347.1| paired box 2 [Ovis aries]
          Length = 393

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|390473028|ref|XP_002756575.2| PREDICTED: paired box protein Pax-2 isoform 3 [Callithrix jacchus]
 gi|397510269|ref|XP_003825522.1| PREDICTED: paired box protein Pax-2 isoform 1 [Pan paniscus]
 gi|403259704|ref|XP_003922342.1| PREDICTED: paired box protein Pax-2 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|410975908|ref|XP_003994369.1| PREDICTED: paired box protein Pax-2 isoform 2 [Felis catus]
 gi|119570199|gb|EAW49814.1| paired box gene 2, isoform CRA_f [Homo sapiens]
          Length = 416

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|2764528|emb|CAA04222.1| paired box protein [Xenopus laevis]
          Length = 385

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|409139|gb|AAA60024.1| paired-box protein [Homo sapiens]
          Length = 393

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|34878701|ref|NP_000269.2| paired box protein Pax-2 isoform b [Homo sapiens]
          Length = 393

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395502299|ref|XP_003755519.1| PREDICTED: paired box protein Pax-2 [Sarcophilus harrisii]
          Length = 570

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 87  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 146

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 147 SVSSINRII 155



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 33  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 87


>gi|301756120|ref|XP_002913953.1| PREDICTED: paired box protein Pax-2-like [Ailuropoda melanoleuca]
          Length = 424

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|148224307|ref|NP_001079830.1| paired box protein Pax-2-A [Xenopus laevis]
 gi|2765059|emb|CAA71207.1| paired box protein [Xenopus laevis]
          Length = 427

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|443686446|gb|ELT89724.1| hypothetical protein CAPTEDRAFT_119889, partial [Capitella teleta]
          Length = 134

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 60/68 (88%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+AI  YKRENPTMFAWEIRDRLL+E +C Q+NVP
Sbjct: 55  RYYETGSIKPGVIGGSKPKVATPKVVEAICKYKRENPTMFAWEIRDRLLSEAVCDQENVP 114

Query: 74  SVSSINRY 81
           SVSSINRY
Sbjct: 115 SVSSINRY 122



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 55


>gi|441600333|ref|XP_004087603.1| PREDICTED: paired box protein Pax-2 isoform 2 [Nomascus leucogenys]
          Length = 411

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 70/105 (66%), Gaps = 10/105 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI---------TYVPIGHG-GVNQLGGVFVNGRPLPDV 108
           SVSSINR             VP+G G G+   G V V     P V
Sbjct: 131 SVSSINRIFRSPGLQTPPVIVPLGSGSGMTMPGHVTVPSTASPPV 175



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|344274435|ref|XP_003409022.1| PREDICTED: hypothetical protein LOC100664929 [Loxodonta africana]
          Length = 905

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 121 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 180

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 181 SVSSINRII 189



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 67  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 121


>gi|190608784|gb|ACE79723.1| paired-box transcription factor 2/5/8 [Branchiostoma lanceolatum]
          Length = 302

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 59/68 (86%)

Query: 13  RRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RRYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D V
Sbjct: 54  RRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTV 113

Query: 73  PSVSSINR 80
           PSVSSINR
Sbjct: 114 PSVSSINR 121



 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGV+VNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   HGGVNQLGGVYVNGRPLPDVVRHRIVELAHQGVRPCDISRQLRVSHGCVSKILRR 55


>gi|119570195|gb|EAW49810.1| paired box gene 2, isoform CRA_b [Homo sapiens]
          Length = 421

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|405971400|gb|EKC36239.1| Paired box protein Pax-2-A [Crassostrea gigas]
          Length = 562

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVDAI  YK ENPTMFAWEIRDRLLAEG+C+ +NVP
Sbjct: 98  RYYETGSIKPGVIGGSKPKVATPKVVDAITRYKHENPTMFAWEIRDRLLAEGVCTAENVP 157

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 158 SVSSINRIV 166



 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 44  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 98


>gi|297301682|ref|XP_001108772.2| PREDICTED: paired box protein Pax-2 isoform 4 [Macaca mulatta]
 gi|297490878|ref|XP_002698481.1| PREDICTED: paired box protein Pax-2 isoform 4 [Bos taurus]
 gi|332834857|ref|XP_001168828.2| PREDICTED: paired box protein Pax-2 isoform 6 [Pan troglodytes]
 gi|335302109|ref|XP_003359377.1| PREDICTED: paired box protein Pax-2 isoform 2 [Sus scrofa]
 gi|223590261|sp|Q02962.4|PAX2_HUMAN RecName: Full=Paired box protein Pax-2
 gi|119570201|gb|EAW49816.1| paired box gene 2, isoform CRA_h [Homo sapiens]
 gi|296472777|tpg|DAA14892.1| TPA: paired box protein 2-like isoform 4 [Bos taurus]
          Length = 417

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|338716466|ref|XP_001500035.3| PREDICTED: paired box protein Pax-2-like [Equus caballus]
          Length = 489

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 132 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 191

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 192 SVSSINRII 200



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 54/58 (93%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 75  SAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 132


>gi|291404660|ref|XP_002718704.1| PREDICTED: paired box protein 2-like isoform 4 [Oryctolagus
           cuniculus]
          Length = 421

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|1469415|gb|AAC63385.1| paired-box protein PAX2 [Homo sapiens]
          Length = 416

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|34878699|ref|NP_003978.2| paired box protein Pax-2 isoform a [Homo sapiens]
          Length = 416

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395828260|ref|XP_003787303.1| PREDICTED: paired box protein Pax-2 isoform 1 [Otolemur garnettii]
          Length = 417

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|50604081|gb|AAH77463.1| Unknown (protein for MGC:82453) [Xenopus laevis]
          Length = 291

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|2764532|emb|CAA04224.1| paired box gene [Xenopus laevis]
          Length = 290

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|440572047|gb|AGC12568.1| Pax258 [Platynereis dumerilii]
          Length = 427

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV AI  YKRENPTMFAWEIRDRLLAEG+C Q+NVP
Sbjct: 117 RYYETGSVRPGVIGGSKPKVATPKVVGAICKYKRENPTMFAWEIRDRLLAEGVCDQENVP 176

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 177 SVSSINRIV 185



 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/57 (91%), Positives = 53/57 (92%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + HGGVNQLGGVFVNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 61  QGHGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 117


>gi|441600330|ref|XP_003255143.2| PREDICTED: paired box protein Pax-2 isoform 1 [Nomascus leucogenys]
          Length = 434

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 70/105 (66%), Gaps = 10/105 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI---------TYVPIGHG-GVNQLGGVFVNGRPLPDV 108
           SVSSINR             VP+G G G+   G V V     P V
Sbjct: 131 SVSSINRIFRSPGLQTPPVIVPLGSGSGMTMPGHVTVPSTASPPV 175



 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|47223272|emb|CAF98656.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 513

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 93  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 152

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 153 SVSSINRII 161



 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIV LAH GVRPCD S+QLRVS+GC SKIL R
Sbjct: 39  HGGVNQLGGVFVNGRPLPDVVRQRIVGLAHQGVRPCDFSKQLRVSYGCFSKILGR 93


>gi|426253357|ref|XP_004020363.1| PREDICTED: uncharacterized protein LOC101111924 [Ovis aries]
          Length = 915

 Score =  120 bits (300), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 438 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 497

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 498 SVSSINRII 506


>gi|402881226|ref|XP_003904176.1| PREDICTED: paired box protein Pax-2-like [Papio anubis]
          Length = 256

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|2764530|emb|CAA04223.1| paired box protein [Xenopus laevis]
          Length = 329

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|410901164|ref|XP_003964066.1| PREDICTED: paired box protein Pax-2-A-like isoform 3 [Takifugu
           rubripes]
          Length = 461

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|348528973|ref|XP_003451989.1| PREDICTED: paired box protein Pax-2a-like isoform 2 [Oreochromis
           niloticus]
          Length = 391

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|33585947|gb|AAH55960.1| Pax2-A protein [Xenopus laevis]
          Length = 256

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|3420029|gb|AAC31810.1| transcription factor [Takifugu rubripes]
          Length = 451

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 55  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDMVP 114

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 115 SVSSINRII 123



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG+FVNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   HGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 55


>gi|410901160|ref|XP_003964064.1| PREDICTED: paired box protein Pax-2-A-like isoform 1 [Takifugu
           rubripes]
          Length = 391

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|348528975|ref|XP_003451990.1| PREDICTED: paired box protein Pax-2a-like isoform 3 [Oreochromis
           niloticus]
          Length = 351

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|380706566|gb|AFD97529.1| Hau-Pax2/5/8 [Helobdella sp. MS-2000]
          Length = 547

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVDAI  YKREN TMFAWEIRDRLLAEG+C Q+NVP
Sbjct: 106 RYYETGSIKPGVIGGSKPKVATPKVVDAICKYKRENATMFAWEIRDRLLAEGVCDQENVP 165

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 166 SVSSINRIV 174



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 54/56 (96%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SHGGVNQLGGVFVNGRPLPD+VRQRIVE+AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 51  SHGGVNQLGGVFVNGRPLPDMVRQRIVEMAHQGVRPCDISRQLRVSHGCVSKILGR 106


>gi|348528971|ref|XP_003451988.1| PREDICTED: paired box protein Pax-2a-like isoform 1 [Oreochromis
           niloticus]
          Length = 406

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|410904088|ref|XP_003965525.1| PREDICTED: paired box protein Pax-8-like [Takifugu rubripes]
          Length = 459

 Score =  119 bits (299), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 63  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDMVP 122

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 123 SVSSINRII 131



 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 54/57 (94%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R HGG+NQLGG+FVNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 7   RGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 63


>gi|444708269|gb|ELW49361.1| Paired box protein Pax-2a [Tupaia chinensis]
          Length = 441

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 58/67 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 65  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 124

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 125 SVSSINR 131



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 11  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 65


>gi|390351165|ref|XP_781786.3| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-2a-like
           [Strongylocentrotus purpuratus]
          Length = 557

 Score =  119 bits (299), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA YKR+NPTMFAWEIRDRLLAEG+C +DNVP
Sbjct: 108 RYYETGSIRPGVIGGSKPKVATPKVVSKIADYKRQNPTMFAWEIRDRLLAEGVCEKDNVP 167

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 168 SVSSINRIV 176



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIV+LAH+GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 54  HGGVNQLGGVFVNGRPLPDVVRQRIVDLAHSGVRPCDISRQLRVSHGCVSKILGR 108


>gi|2394235|gb|AAB70245.1| paired box protein [Paracentrotus lividus]
          Length = 529

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA YKR+NPTMFAWEIRDRLLAEG+C +DNVP
Sbjct: 71  RYYETGSIRPGVIGGSKPKVATPKVVSKIADYKRQNPTMFAWEIRDRLLAEGVCEKDNVP 130

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 131 SVSSINRIV 139



 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +SHGGVNQLGGVFVNGRPLPDVVRQRIV+LAH+GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 13  ACKSHGGVNQLGGVFVNGRPLPDVVRQRIVDLAHSGVRPCDISRQLRVSHGCVSKILGR 71


>gi|410901162|ref|XP_003964065.1| PREDICTED: paired box protein Pax-2-A-like isoform 2 [Takifugu
           rubripes]
          Length = 406

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|2765061|emb|CAA71208.1| paired box protein [Xenopus laevis]
          Length = 497

 Score =  119 bits (297), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKV T  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVTTPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|47223577|emb|CAF99186.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 384

 Score =  119 bits (297), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 54  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDMVP 113

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 114 SVSSINRII 122



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 52/54 (96%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GG+NQLGG+FVNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   GGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 54


>gi|327283721|ref|XP_003226589.1| PREDICTED: paired box protein Pax-2-like [Anolis carolinensis]
 gi|446397|prf||1911404A PAX-2 gene
          Length = 136

 Score =  119 bits (297), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 58/67 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 130 SVSSINR 136



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|348508596|ref|XP_003441840.1| PREDICTED: paired box protein Pax-2-B-like isoform 2 [Oreochromis
           niloticus]
          Length = 389

 Score =  119 bits (297), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|432923473|ref|XP_004080477.1| PREDICTED: paired box protein Pax-2-B isoform 1 [Oryzias latipes]
          Length = 389

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|291223999|ref|XP_002731996.1| PREDICTED: paired box protein 2/5/8 [Saccoglossus kowalevskii]
          Length = 619

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  +NVP
Sbjct: 63  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEAVCDNENVP 122

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 123 SVSSINRIV 131



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIV+LAH+GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 9   HGGVNQLGGVFVNGRPLPDVVRQRIVDLAHSGVRPCDISRQLRVSHGCVSKILGR 63


>gi|194678984|ref|XP_001787759.1| PREDICTED: uncharacterized protein LOC789450 [Bos taurus]
          Length = 797

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 58/67 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 731 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 790

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 791 SVSSINR 797



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 54/58 (93%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 674 SAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 731


>gi|2344869|emb|CAB09696.1| PAX2 [Oryzias latipes]
          Length = 361

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 72  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 131

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 132 SVSSINRII 140



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 6   AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|325980250|gb|ADZ48384.1| Pax2 [Polyodon spathula]
          Length = 284

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 58/68 (85%)

Query: 15 YYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPS 74
          YYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VPS
Sbjct: 2  YYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS 61

Query: 75 VSSINRYI 82
          VSSINR I
Sbjct: 62 VSSINRII 69


>gi|432923620|ref|XP_004080478.1| PREDICTED: paired box protein Pax-2-B isoform 2 [Oryzias latipes]
          Length = 387

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|348508594|ref|XP_003441839.1| PREDICTED: paired box protein Pax-2-B-like isoform 1 [Oreochromis
           niloticus]
          Length = 387

 Score =  119 bits (297), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|432887621|ref|XP_004074943.1| PREDICTED: paired box protein Pax-8-like [Oryzias latipes]
          Length = 473

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 75  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDTVP 134

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 135 SVSSINRII 143



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG+FVNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 21  HGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 75


>gi|317419497|emb|CBN81534.1| Paired box protein Pax-2a [Dicentrarchus labrax]
          Length = 387

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|348508598|ref|XP_003441841.1| PREDICTED: paired box protein Pax-2-B-like isoform 3 [Oreochromis
           niloticus]
          Length = 349

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|432923622|ref|XP_004080479.1| PREDICTED: paired box protein Pax-2-B isoform 3 [Oryzias latipes]
          Length = 350

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|351715587|gb|EHB18506.1| Paired box protein Pax-2 [Heterocephalus glaber]
          Length = 702

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 58/70 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 103 RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 162

Query: 74  SVSSINRYIT 83
           SVSSIN   T
Sbjct: 163 SVSSINSSYT 172



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 49  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 103


>gi|4377877|gb|AAD19293.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 389

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 74  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 133

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 134 SVSSINRII 142



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 74


>gi|4377865|gb|AAD19287.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 334

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 74  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 133

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 134 SVSSINRII 142



 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 74


>gi|348536276|ref|XP_003455623.1| PREDICTED: paired box protein Pax-8-like [Oreochromis niloticus]
          Length = 482

 Score =  118 bits (296), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 80  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDTVP 139

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 140 SVSSINRII 148



 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 12/83 (14%)

Query: 91  GVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNG 150
           GVN++ GVF+                  HGG+NQLGG+FVNGRPLP+V+RQRIV++AH G
Sbjct: 10  GVNRVEGVFIP------------PPPPGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQG 57

Query: 151 VRPCDISRQLRVSHGCVSKILSR 173
           VRPCDISRQLRVSHGCVSKIL R
Sbjct: 58  VRPCDISRQLRVSHGCVSKILGR 80


>gi|4377873|gb|AAD19291.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 330

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|4377879|gb|AAD19294.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 385

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|339236597|ref|XP_003379853.1| putative paired box protein Pax-2 [Trichinella spiralis]
 gi|316977437|gb|EFV60539.1| putative paired box protein Pax-2 [Trichinella spiralis]
          Length = 483

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 61/69 (88%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K GVIGGSKPKVAT  VV AIA+YK++NPTMFAWEIRDRLLA+GIC  DNVP
Sbjct: 87  RFYETGSIKPGVIGGSKPKVATNKVVGAIANYKKQNPTMFAWEIRDRLLADGICDHDNVP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRIV 155



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 53/57 (92%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           RSH GVNQLGGVFVNGRPLPD +RQRIVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 31  RSHTGVNQLGGVFVNGRPLPDHIRQRIVELAKSGVRPCDISRQLRVSHGCVSKILGR 87


>gi|4377875|gb|AAD19292.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 404

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 74  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 133

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 134 SVSSINRII 142



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 74


>gi|4377881|gb|AAD19295.1| paired box protein pax2.1 splice variant, partial [Danio rerio]
          Length = 400

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|4377883|gb|AAD19296.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 395

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 74  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 133

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 134 SVSSINRII 142



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 74


>gi|18859203|ref|NP_571259.1| paired box protein Pax-2a [Danio rerio]
 gi|62551|emb|CAA45378.1| pax[zf-b] [Danio rerio]
 gi|4377863|gb|AAD19286.1| paired box protein pax2.1 splice variant [Danio rerio]
 gi|45219816|gb|AAH66690.1| Paired box gene 2a [Danio rerio]
          Length = 391

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|410895439|ref|XP_003961207.1| PREDICTED: paired box protein Pax-2-B-like isoform 1 [Takifugu
           rubripes]
          Length = 387

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            GGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  QGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|325980256|gb|ADZ48387.1| Pax8 [Polyodon spathula]
          Length = 166

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D  P
Sbjct: 35  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDTAP 94

Query: 74  SVSSINRYI 82
           SVSS+NR I
Sbjct: 95  SVSSVNRII 103



 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 33/35 (94%)

Query: 139 VRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   IRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 35


>gi|27528344|emb|CAD43608.1| paired box protein [Platynereis dumerilii]
          Length = 230

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 60/69 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV AI  YKRENPTMFAWEIRDRLLAEG+C Q+NVP
Sbjct: 55  RYYETGSVRPGVIGGSKPKVATPKVVGAICKYKRENPTMFAWEIRDRLLAEGVCDQENVP 114

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 115 SVSSINRIV 123



 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   HGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 55


>gi|283464161|gb|ADB22664.1| paired box protein 2/5/8 [Saccoglossus kowalevskii]
          Length = 184

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  +NVP
Sbjct: 63  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAEAVCDNENVP 122

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 123 SVSSINRIV 131



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIV+LAH+GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 9   HGGVNQLGGVFVNGRPLPDVVRQRIVDLAHSGVRPCDISRQLRVSHGCVSKILGR 63


>gi|21264493|sp|Q90268.2|PAX2A_DANRE RecName: Full=Paired box protein Pax-2a; AltName: Full=No isthmus
           protein; AltName: Full=Pax[Zf-b]
 gi|4377869|gb|AAD19289.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 410

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 74  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 133

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 134 SVSSINRII 142



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 74


>gi|325980254|gb|ADZ48386.1| Pax5 [Polyodon spathula]
          Length = 194

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 43  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 102

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 103 SVSSINRII 111



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/43 (95%), Positives = 41/43 (95%)

Query: 131 NGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           NGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   NGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 43


>gi|4377861|gb|AAD19285.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 406

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|326668324|ref|XP_001339893.4| PREDICTED: paired box protein Pax-8, partial [Danio rerio]
          Length = 475

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 90  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGDTVP 149

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 150 SVSSINRII 158



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG+FVNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 36  HGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 90


>gi|410895441|ref|XP_003961208.1| PREDICTED: paired box protein Pax-2-B-like isoform 2 [Takifugu
           rubripes]
          Length = 349

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            GGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  QGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|4377867|gb|AAD19288.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 351

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|3420035|gb|AAC31813.1| transcription factor [Danio rerio]
          Length = 429

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 44  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDGDTVP 103

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 104 SVSSINRII 112



 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/44 (86%), Positives = 42/44 (95%)

Query: 130 VNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNGRPLP+V+RQRIV++AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   VNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKILGR 44


>gi|113201774|gb|ABI33104.1| PAX5/ZNF521 fusion protein [Homo sapiens]
          Length = 1541

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|4377871|gb|AAD19290.1| paired box protein pax2.1 splice variant [Danio rerio]
          Length = 292

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|113205558|ref|NP_001037888.1| paired box 2 [Xenopus (Silurana) tropicalis]
 gi|89268642|emb|CAJ82432.1| paired box gene 2 [Xenopus (Silurana) tropicalis]
          Length = 140

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 58/70 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 130

Query: 74  SVSSINRYIT 83
           SVSSIN   T
Sbjct: 131 SVSSINSKQT 140



 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|113201776|gb|ABI33105.1| PAX5/FOXP1 fusion protein [Homo sapiens]
          Length = 877

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|553607|gb|AAC41711.1| paired-box protein [Homo sapiens]
          Length = 135

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/66 (84%), Positives = 57/66 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVP 129

Query: 74  SVSSIN 79
           SVSSIN
Sbjct: 130 SVSSIN 135



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|2764534|emb|CAA04225.1| paired box protein [Xenopus laevis]
          Length = 252

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLA GIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAVGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSK+L R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKVLGR 70


>gi|148224264|ref|NP_001079237.1| paired box protein Pax-5 [Xenopus laevis]
 gi|82249042|sp|Q9YH95.1|PAX5_XENLA RecName: Full=Paired box protein Pax-5; Short=XPax-5
 gi|4138727|emb|CAA09230.1| paired box protein [Xenopus laevis]
          Length = 388

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|327277237|ref|XP_003223372.1| PREDICTED: paired box protein Pax-5-like [Anolis carolinensis]
          Length = 390

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/69 (81%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|196049288|dbj|BAG68613.1| transcription factor [Cyprinus carpio]
          Length = 157

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 27 RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 86

Query: 74 SVSSINRYI 82
          SVSSINR I
Sbjct: 87 SVSSINRII 95



 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/27 (92%), Positives = 25/27 (92%)

Query: 147 AHNGVRPCDISRQLRVSHGCVSKILSR 173
           AH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   AHQGVRPCDISRQLRVSHGCVSKILGR 27


>gi|47212528|emb|CAF93848.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 218

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 58/67 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 86  RYYETGSIKPGVIGGSKPKVATPKVVEKIADYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 145

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 146 SVSSINR 152



 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            GGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 32  QGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 86


>gi|47208299|emb|CAF93365.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 356

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 56  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 115

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 116 SVSSINRII 124



 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 2   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 56


>gi|335353917|dbj|BAK39715.1| paired box protein 5 [Tursiops truncatus]
          Length = 243

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 20 RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 79

Query: 74 SVSSINRYI 82
          SVSSINR I
Sbjct: 80 SVSSINRII 88



 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 19/20 (95%), Positives = 19/20 (95%)

Query: 154 CDISRQLRVSHGCVSKILSR 173
           CDISRQLRVSHGCVSKIL R
Sbjct: 1   CDISRQLRVSHGCVSKILGR 20


>gi|18448649|gb|AAL69892.1| Pax2.1 protein [Takifugu rubripes]
          Length = 135

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/66 (83%), Positives = 57/66 (86%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 129

Query: 74  SVSSIN 79
           SVSSIN
Sbjct: 130 SVSSIN 135



 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|74136733|ref|NP_001027652.1| Pax-2/5/8 [Ciona intestinalis]
 gi|26017198|dbj|BAC41498.1| Pax-2/5/8 [Ciona intestinalis]
          Length = 341

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLL+EGIC  DNVP
Sbjct: 82  RYYETGSIRPGVIGGSKPKVATPRVVEKICDYKRQNPTMFAWEIRDRLLSEGICDHDNVP 141

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 142 SVSSINRIV 150



 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 56/62 (90%), Gaps = 1/62 (1%)

Query: 113 IVASRS-HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           +  SRS HGGVNQLGGV+VNGRPLPD VRQ+IV+ AH GVRPCDI+RQLRVSHGCVSKIL
Sbjct: 21  LTPSRSGHGGVNQLGGVYVNGRPLPDQVRQQIVDQAHIGVRPCDIARQLRVSHGCVSKIL 80

Query: 172 SR 173
           +R
Sbjct: 81  AR 82


>gi|344236082|gb|EGV92185.1| Paired box protein Pax-5 [Cricetulus griseus]
          Length = 386

 Score =  116 bits (290), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/74 (75%), Positives = 59/74 (79%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
           F C   YYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C 
Sbjct: 101 FSCGYTYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCD 160

Query: 69  QDNVPSVSSINRYI 82
            D VPSVSSINR I
Sbjct: 161 NDTVPSVSSINRII 174


>gi|70570858|dbj|BAE06634.1| transcription factor protein [Ciona intestinalis]
          Length = 346

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLL+EGIC  DNVP
Sbjct: 87  RYYETGSIRPGVIGGSKPKVATPRVVEKICDYKRQNPTMFAWEIRDRLLSEGICDHDNVP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRIV 155



 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 56/62 (90%), Gaps = 1/62 (1%)

Query: 113 IVASRS-HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           +  SRS HGGVNQLGGV+VNGRPLPD VRQ+IV+ AH GVRPCDI+RQLRVSHGCVSKIL
Sbjct: 26  LTPSRSGHGGVNQLGGVYVNGRPLPDQVRQQIVDQAHIGVRPCDIARQLRVSHGCVSKIL 85

Query: 172 SR 173
           +R
Sbjct: 86  AR 87


>gi|113045355|gb|ABI30005.1| B-cell lineage specific activator/TEL oncogene fusion protein [Homo
           sapiens]
          Length = 556

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|38885409|gb|AAR27591.1| BSAP splice variant delta7 [Homo sapiens]
 gi|119578699|gb|EAW58295.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_b [Homo sapiens]
          Length = 288

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|254039691|ref|NP_571713.1| paired box protein Pax-5 [Danio rerio]
          Length = 396

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 71  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|8920362|emb|CAB96396.1| transcription factor [Phallusia mammillata]
          Length = 521

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLL E IC QDNVP
Sbjct: 92  RYYETGSIRPGVIGGSKPKVATPKVVEKICEYKRQNPTMFAWEIRDRLLGEQICDQDNVP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRIV 160



 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 57/62 (91%), Gaps = 1/62 (1%)

Query: 113 IVASRS-HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           I  +RS HGG+NQLGGV+VNGRPLPD +RQ+IV+ AH+GVRPCDI+RQLRVSHGCVSKIL
Sbjct: 31  ITHTRSGHGGINQLGGVYVNGRPLPDQIRQQIVDQAHHGVRPCDIARQLRVSHGCVSKIL 90

Query: 172 SR 173
           +R
Sbjct: 91  AR 92


>gi|38885472|gb|AAR27595.1| BSAP splice variant delta789 [Homo sapiens]
 gi|119578698|gb|EAW58294.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_a [Homo sapiens]
          Length = 295

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|348529508|ref|XP_003452255.1| PREDICTED: paired box protein Pax-5-like isoform 2 [Oreochromis
           niloticus]
          Length = 392

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|449282917|gb|EMC89652.1| Paired box protein Pax-5, partial [Columba livia]
          Length = 246

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 57  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 116

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 117 SVSSINRII 125



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 3   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 57


>gi|18693239|dbj|BAB85112.1| LjPax2/5/8 [Lethenteron camtschaticum]
          Length = 416

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDTDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|194725041|dbj|BAG66241.1| transcription factor PAX5 [Carassius auratus langsdorfii]
          Length = 423

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 71  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|348529510|ref|XP_003452256.1| PREDICTED: paired box protein Pax-5-like isoform 3 [Oreochromis
           niloticus]
          Length = 396

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|3420033|gb|AAC31812.1| transcription factor [Danio rerio]
          Length = 369

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 44  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 103

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 104 SVSSINRII 112



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 42/44 (95%)

Query: 130 VNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   VNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 44


>gi|223558225|gb|ACM91608.1| B cell specific activator protein variant A delta 7 insert 6/7
           [Homo sapiens]
          Length = 307

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|402896957|ref|XP_003911544.1| PREDICTED: paired box protein Pax-5, partial [Papio anubis]
          Length = 322

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|38885459|gb|AAR27594.1| BSAP splice variant delta78 [Homo sapiens]
 gi|119578701|gb|EAW58297.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_d [Homo sapiens]
          Length = 324

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|348529506|ref|XP_003452254.1| PREDICTED: paired box protein Pax-5-like isoform 1 [Oreochromis
           niloticus]
          Length = 424

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|3523158|gb|AAC34300.1| transcription factor [Takifugu rubripes]
          Length = 392

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|83776614|ref|NP_001032960.1| transcription factor pax5 [Takifugu rubripes]
 gi|76559836|dbj|BAE45316.1| transcription factor PAX5 [Takifugu rubripes]
          Length = 424

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|444729450|gb|ELW69866.1| Paired box protein Pax-5 [Tupaia chinensis]
          Length = 389

 Score =  115 bits (288), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 59/73 (80%)

Query: 10  LCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQ 69
           L   RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  
Sbjct: 129 LAAGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDN 188

Query: 70  DNVPSVSSINRYI 82
           D VPSVSSINR I
Sbjct: 189 DTVPSVSSINRII 201


>gi|70570870|dbj|BAE06636.1| transcription factor protein [Ciona intestinalis]
          Length = 812

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  I  YKRENPTMFAWEIRDRLLA+ +CSQ+ VP
Sbjct: 72  RYYETGSIRPGVIGGSKPKVATHDVVMRITEYKRENPTMFAWEIRDRLLADEVCSQETVP 131

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 132 SVSSINRIV 140



 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 53/57 (92%), Gaps = 1/57 (1%)

Query: 118 SHGG-VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SHGG VNQLGG++VNGRPLP+ +RQRIV L+H GVRPCDISRQLRVSHGCVSKIL+R
Sbjct: 16  SHGGGVNQLGGMYVNGRPLPEPIRQRIVNLSHQGVRPCDISRQLRVSHGCVSKILAR 72


>gi|431909900|gb|ELK13002.1| Paired box protein Pax-5, partial [Pteropus alecto]
          Length = 342

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 57  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 116

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 117 SVSSINRII 125



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 3   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 57


>gi|444710505|gb|ELW51485.1| Paired box protein Pax-8 [Tupaia chinensis]
          Length = 472

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 69  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 69


>gi|345309812|ref|XP_003428884.1| PREDICTED: paired box protein Pax-8-like [Ornithorhynchus anatinus]
          Length = 569

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 152 RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 211

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 212 SVSSINRII 220



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 98  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 152


>gi|344291542|ref|XP_003417494.1| PREDICTED: hypothetical protein LOC100674361 [Loxodonta africana]
          Length = 986

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 593 RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 652

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 653 SVSSINRII 661



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query: 76  SSINRYITYVPIGHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPL 135
           S   ++I  +P+     N L   F +  P PD    R+++   HGG+NQLGG FVNGRPL
Sbjct: 497 SEAQKHIVPLPMLLSIPNSLEVTF-SAPPGPDQPSLRLLSPLGHGGLNQLGGAFVNGRPL 555

Query: 136 PDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           P+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 556 PEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 593


>gi|7669542|ref|NP_054698.1| paired box protein Pax-8 isoform PAX8E [Homo sapiens]
 gi|397465522|ref|XP_003804541.1| PREDICTED: paired box protein Pax-8 isoform 4 [Pan paniscus]
 gi|426336906|ref|XP_004031695.1| PREDICTED: paired box protein Pax-8 isoform 4 [Gorilla gorilla
           gorilla]
 gi|7524546|gb|AAB34218.2| paired box protein 8 isoform 3 [Homo sapiens]
 gi|119594042|gb|EAW73636.1| paired box gene 8, isoform CRA_e [Homo sapiens]
          Length = 287

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|432846335|ref|XP_004065886.1| PREDICTED: paired box protein Pax-2-B-like [Oryzias latipes]
          Length = 382

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 70  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|223558217|gb|ACM91604.1| B cell specific activator protein variant A delta 8/9 [Homo
           sapiens]
          Length = 328

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|25247297|gb|AAN72308.1| transcription factor Pax8 [Mus musculus]
          Length = 251

 Score =  115 bits (288), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 55  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 114

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 115 SVSSINRII 123



 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 55


>gi|185135004|ref|NP_001118154.1| Pax-5 protein [Oncorhynchus mykiss]
 gi|157688387|gb|ABV64840.1| Pax-5 [Oncorhynchus mykiss]
          Length = 396

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D+VP
Sbjct: 72  RYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVP 131

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 132 SVSSINRII 140



 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVR RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 18  HGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 72


>gi|296482542|tpg|DAA24657.1| TPA: paired box 8 [Bos taurus]
          Length = 560

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 167 RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 226

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 227 SVSSINRII 235



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 113 HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 167


>gi|296190313|ref|XP_002743136.1| PREDICTED: paired box protein Pax-5 isoform 3 [Callithrix jacchus]
 gi|38885441|gb|AAR27593.1| BSAP splice variant delta9 [Homo sapiens]
 gi|119578700|gb|EAW58296.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_c [Homo sapiens]
          Length = 362

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|441643170|ref|XP_003277748.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 isoform 1
           [Nomascus leucogenys]
          Length = 460

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|5803117|ref|NP_003457.1| paired box protein Pax-8 isoform PAX8A [Homo sapiens]
 gi|215273928|sp|Q06710.2|PAX8_HUMAN RecName: Full=Paired box protein Pax-8
 gi|307321|gb|AAA03539.1| paired box homeotic protein [Homo sapiens]
 gi|12654465|gb|AAH01060.1| Paired box 8 [Homo sapiens]
 gi|62630135|gb|AAX88880.1| unknown [Homo sapiens]
 gi|119594035|gb|EAW73629.1| paired box gene 8, isoform CRA_a [Homo sapiens]
 gi|119594038|gb|EAW73632.1| paired box gene 8, isoform CRA_a [Homo sapiens]
 gi|123982930|gb|ABM83206.1| paired box gene 8 [synthetic construct]
 gi|123997609|gb|ABM86406.1| paired box gene 8 [synthetic construct]
 gi|158257814|dbj|BAF84880.1| unnamed protein product [Homo sapiens]
 gi|261860268|dbj|BAI46656.1| paired box 8 [synthetic construct]
          Length = 450

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|395853596|ref|XP_003799290.1| PREDICTED: paired box protein Pax-8 isoform 1 [Otolemur garnettii]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|358414453|ref|XP_614504.6| PREDICTED: paired box protein Pax-8 isoform 3 [Bos taurus]
 gi|359070171|ref|XP_002691446.2| PREDICTED: paired box protein Pax-8 isoform 1 [Bos taurus]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|145566915|sp|A0JMA6.2|PAX8_XENTR RecName: Full=Paired box protein Pax-8
          Length = 458

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 73  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 132

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 133 SVSSINRII 141



 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 19  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 73


>gi|1346923|sp|P47240.1|PAX8_CANFA RecName: Full=Paired box protein Pax-8
 gi|619068|emb|CAA58571.1| Pax-8 [Canis lupus familiaris]
          Length = 459

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|395853598|ref|XP_003799291.1| PREDICTED: paired box protein Pax-8 isoform 2 [Otolemur garnettii]
          Length = 405

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|6754990|ref|NP_035170.1| paired box protein Pax-8 [Mus musculus]
 gi|341942210|sp|Q00288.3|PAX8_MOUSE RecName: Full=Paired box protein Pax-8
 gi|53594|emb|CAA40725.1| Pax8 [Mus musculus]
 gi|1850881|emb|CAA67904.1| Pax-8 [Mus musculus]
 gi|18089001|gb|AAH20526.1| Paired box gene 8 [Mus musculus]
 gi|148676225|gb|EDL08172.1| paired box gene 8 [Mus musculus]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|403303907|ref|XP_003942560.1| PREDICTED: paired box protein Pax-8 isoform 1 [Saimiri boliviensis
           boliviensis]
          Length = 456

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|354502554|ref|XP_003513349.1| PREDICTED: paired box protein Pax-8 [Cricetulus griseus]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|351701104|gb|EHB04023.1| Paired box protein Pax-8 [Heterocephalus glaber]
          Length = 483

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 88  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 147

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 148 SVSSINRII 156



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 34  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 88


>gi|335308513|ref|XP_003361260.1| PREDICTED: paired box protein Pax-8-like [Sus scrofa]
          Length = 437

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 87  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 146

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 147 SVSSINRII 155



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 49/52 (94%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 36  LNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 87


>gi|327478430|ref|NP_001126820.1| paired box protein Pax-8 isoform 2 [Pongo abelii]
 gi|397465516|ref|XP_003804538.1| PREDICTED: paired box protein Pax-8 isoform 1 [Pan paniscus]
 gi|426336900|ref|XP_004031692.1| PREDICTED: paired box protein Pax-8 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 456

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|301781915|ref|XP_002926373.1| PREDICTED: paired box protein Pax-8-like [Ailuropoda melanoleuca]
          Length = 458

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|284413690|ref|NP_001072769.2| paired box protein Pax-8 [Xenopus (Silurana) tropicalis]
          Length = 466

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 81  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 140

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 141 SVSSINRII 149



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 27  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 81


>gi|281347767|gb|EFB23351.1| hypothetical protein PANDA_016017 [Ailuropoda melanoleuca]
          Length = 434

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|432110746|gb|ELK34223.1| Paired box protein Pax-5, partial [Myotis davidii]
          Length = 210

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 57  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 116

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 117 SVSSINRII 125



 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 3   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 57


>gi|55732749|emb|CAH93072.1| hypothetical protein [Pongo abelii]
          Length = 456

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|119594043|gb|EAW73637.1| paired box gene 8, isoform CRA_f [Homo sapiens]
 gi|119594045|gb|EAW73639.1| paired box gene 8, isoform CRA_f [Homo sapiens]
          Length = 387

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|355751594|gb|EHH55849.1| hypothetical protein EGM_05133 [Macaca fascicularis]
          Length = 450

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|109104288|ref|XP_001093332.1| PREDICTED: paired box protein Pax-8 isoform 5 [Macaca mulatta]
          Length = 387

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|344257890|gb|EGW13994.1| Paired box protein Pax-8 [Cricetulus griseus]
          Length = 452

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 78  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 137

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 138 SVSSINRII 146



 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 55/59 (93%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A++ HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 20  ANQGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 78


>gi|397465518|ref|XP_003804539.1| PREDICTED: paired box protein Pax-8 isoform 2 [Pan paniscus]
 gi|426336902|ref|XP_004031693.1| PREDICTED: paired box protein Pax-8 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 404

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|358414455|ref|XP_003582838.1| PREDICTED: paired box protein Pax-8 isoform 1 [Bos taurus]
 gi|359070174|ref|XP_003586691.1| PREDICTED: paired box protein Pax-8 isoform 2 [Bos taurus]
          Length = 405

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|355566008|gb|EHH22437.1| hypothetical protein EGK_05699 [Macaca mulatta]
          Length = 456

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|77020244|ref|NP_112403.2| paired box protein Pax-8 [Rattus norvegicus]
 gi|114152856|sp|P51974.2|PAX8_RAT RecName: Full=Paired box protein Pax-8
 gi|51859130|gb|AAH81779.1| Paired box 8 [Rattus norvegicus]
 gi|149039440|gb|EDL93660.1| paired box gene 8 [Rattus norvegicus]
          Length = 457

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|109104286|ref|XP_001093559.1| PREDICTED: paired box protein Pax-8 isoform 7 [Macaca mulatta]
          Length = 456

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|402891973|ref|XP_003909202.1| PREDICTED: paired box protein Pax-8 isoform 1 [Papio anubis]
          Length = 456

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|296223303|ref|XP_002757563.1| PREDICTED: paired box protein Pax-8 [Callithrix jacchus]
          Length = 480

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|440910792|gb|ELR60550.1| Paired box protein Pax-8, partial [Bos grunniens mutus]
          Length = 457

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|395508739|ref|XP_003758667.1| PREDICTED: paired box protein Pax-8 [Sarcophilus harrisii]
          Length = 476

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 83  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 142

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 143 SVSSINRII 151



 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/65 (78%), Positives = 57/65 (87%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           V  + + +R HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVS
Sbjct: 19  VGHQGIKTRCHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVS 78

Query: 169 KILSR 173
           KIL R
Sbjct: 79  KILGR 83


>gi|403303909|ref|XP_003942561.1| PREDICTED: paired box protein Pax-8 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 404

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|402891975|ref|XP_003909203.1| PREDICTED: paired box protein Pax-8 isoform 2 [Papio anubis]
          Length = 404

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|18158729|pdb|1K78|A Chain A, Pax5(1-149)+ets-1(331-440)+dna
 gi|18158733|pdb|1K78|E Chain E, Pax5(1-149)+ets-1(331-440)+dna
 gi|18158737|pdb|1K78|I Chain I, Pax5(1-149)+ets-1(331-440)+dna
 gi|27573880|pdb|1MDM|A Chain A, Inhibited Fragment Of Ets-1 And Paired Domain Of Pax5
           Bound To Dna
          Length = 149

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|223558221|gb|ACM91606.1| B cell specific activator protein variant A delta 5/9 [Homo
           sapiens]
          Length = 319

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|354485351|ref|XP_003504847.1| PREDICTED: paired box protein Pax-5-like, partial [Cricetulus
           griseus]
          Length = 370

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 50  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 109

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 110 SVSSINRII 118



 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/41 (95%), Positives = 39/41 (95%)

Query: 133 RPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           RPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  RPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 50


>gi|15625550|gb|AAL04157.1|AF411466_1 transcription factor Pax2, partial [Petromyzon marinus]
          Length = 322

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS + GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 5  RYYETGSIRPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAERVCDTDTVP 64

Query: 74 SVSSINRYI 82
          SVSSINR I
Sbjct: 65 SVSSINRII 73


>gi|1122896|emb|CAA63930.1| Pax-8 [Rattus norvegicus]
          Length = 458

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|334313412|ref|XP_001377012.2| PREDICTED: paired box protein Pax-8-like [Monodelphis domestica]
          Length = 583

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 190 RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 249

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 250 SVSSINRII 258



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 136 HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 190


>gi|355709389|gb|AES03575.1| paired box 5 [Mustela putorius furo]
          Length = 366

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|7524363|ref|NP_039246.1| paired box protein Pax-8 isoform PAX8C [Homo sapiens]
 gi|998701|gb|AAB34216.1| PAX8 [Homo sapiens]
 gi|119594040|gb|EAW73634.1| paired box gene 8, isoform CRA_d [Homo sapiens]
 gi|119594044|gb|EAW73638.1| paired box gene 8, isoform CRA_d [Homo sapiens]
          Length = 398

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|50979044|ref|NP_001003248.1| paired box protein Pax-8 [Canis lupus familiaris]
 gi|619070|emb|CAA58572.1| Pax-8 [Canis lupus familiaris]
          Length = 413

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|348558521|ref|XP_003465066.1| PREDICTED: paired box protein Pax-8-like [Cavia porcellus]
          Length = 464

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 71  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 57/67 (85%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           D +   + + + HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGC
Sbjct: 5   DGLEAVLCSVQGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGC 64

Query: 167 VSKILSR 173
           VSKIL R
Sbjct: 65  VSKILGR 71


>gi|224091743|ref|XP_002192863.1| PREDICTED: paired box protein Pax-5 [Taeniopygia guttata]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/60 (93%), Positives = 57/60 (95%), Gaps = 1/60 (1%)

Query: 115 ASRS-HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ASR+ HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  ASRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|208435491|pdb|2K27|A Chain A, Solution Structure Of Human Pax8 Paired Box Domain
          Length = 159

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|297467375|ref|XP_618574.5| PREDICTED: paired box protein Pax-5 isoform 1 [Bos taurus]
 gi|297477981|ref|XP_002689763.1| PREDICTED: paired box protein Pax-5 [Bos taurus]
 gi|296484681|tpg|DAA26796.1| TPA: paired box gene 5-like [Bos taurus]
          Length = 392

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|351696948|gb|EHA99866.1| Paired box protein Pax-5, partial [Heterocephalus glaber]
          Length = 355

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 59  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 118

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 119 SVSSINRII 127



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 5   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 59


>gi|426220188|ref|XP_004004298.1| PREDICTED: paired box protein Pax-5 [Ovis aries]
          Length = 392

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|334332855|ref|XP_001363552.2| PREDICTED: paired box protein Pax-5-like [Monodelphis domestica]
          Length = 378

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 58  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 117

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 118 SVSSINRII 126



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 4   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 58


>gi|440890686|gb|ELR44898.1| Paired box protein Pax-5, partial [Bos grunniens mutus]
          Length = 355

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 59  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 118

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 119 SVSSINRII 127



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 5   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 59


>gi|6679213|ref|NP_032808.1| paired box protein Pax-5 [Mus musculus]
 gi|400733|sp|Q02650.1|PAX5_MOUSE RecName: Full=Paired box protein Pax-5; AltName:
           Full=B-cell-specific transcription factor; Short=BSAP
 gi|192242|gb|AAA37325.1| transcription factor [Mus musculus]
 gi|148670473|gb|EDL02420.1| paired box gene 5 [Mus musculus]
 gi|162318416|gb|AAI57082.1| Paired box gene 5 [synthetic construct]
 gi|162318892|gb|AAI56135.1| Paired box gene 5 [synthetic construct]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395823849|ref|XP_003785189.1| PREDICTED: paired box protein Pax-5 [Otolemur garnettii]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|157824085|ref|NP_001102731.1| paired box protein Pax-5 [Rattus norvegicus]
 gi|149045794|gb|EDL98794.1| similar to transcription factor (predicted) [Rattus norvegicus]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|358414457|ref|XP_003582839.1| PREDICTED: paired box protein Pax-8 isoform 2 [Bos taurus]
 gi|359070177|ref|XP_003586692.1| PREDICTED: paired box protein Pax-8 isoform 3 [Bos taurus]
          Length = 322

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|9951920|ref|NP_057953.1| paired box protein Pax-5 [Homo sapiens]
 gi|114624528|ref|XP_001169207.1| PREDICTED: paired box protein Pax-5 isoform 7 [Pan troglodytes]
 gi|296190309|ref|XP_002743134.1| PREDICTED: paired box protein Pax-5 isoform 1 [Callithrix jacchus]
 gi|397519552|ref|XP_003829922.1| PREDICTED: paired box protein Pax-5 [Pan paniscus]
 gi|403298595|ref|XP_003940099.1| PREDICTED: paired box protein Pax-5 [Saimiri boliviensis
           boliviensis]
 gi|426361773|ref|XP_004048074.1| PREDICTED: paired box protein Pax-5 [Gorilla gorilla gorilla]
 gi|417449|sp|Q02548.1|PAX5_HUMAN RecName: Full=Paired box protein Pax-5; AltName:
           Full=B-cell-specific transcription factor; Short=BSAP
 gi|179556|gb|AAA58397.1| transcription factor [Homo sapiens]
 gi|38885391|gb|AAR27590.1| BSAP [Homo sapiens]
 gi|117606486|gb|ABK41900.1| paired box gene 5 (B-cell lineage specific activator) [Homo
           sapiens]
 gi|119578702|gb|EAW58298.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_e [Homo sapiens]
 gi|162317614|gb|AAI56190.1| Paired box 5 [synthetic construct]
 gi|162318208|gb|AAI56928.1| Paired box 5 [synthetic construct]
 gi|261861668|dbj|BAI47356.1| paired box 5 [synthetic construct]
 gi|355567622|gb|EHH23963.1| B-cell-specific transcription factor [Macaca mulatta]
 gi|355753193|gb|EHH57239.1| B-cell-specific transcription factor [Macaca fascicularis]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|395514373|ref|XP_003761392.1| PREDICTED: paired box protein Pax-5 [Sarcophilus harrisii]
          Length = 390

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|332228385|ref|XP_003263371.1| PREDICTED: paired box protein Pax-5 [Nomascus leucogenys]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|301612842|ref|XP_002935920.1| PREDICTED: paired box protein Pax-5-like [Xenopus (Silurana)
           tropicalis]
          Length = 389

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|297684029|ref|XP_002819659.1| PREDICTED: paired box protein Pax-5 isoform 1 [Pongo abelii]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|7524365|ref|NP_039247.1| paired box protein Pax-8 isoform PAX8D [Homo sapiens]
 gi|397465520|ref|XP_003804540.1| PREDICTED: paired box protein Pax-8 isoform 3 [Pan paniscus]
 gi|426336904|ref|XP_004031694.1| PREDICTED: paired box protein Pax-8 isoform 3 [Gorilla gorilla
           gorilla]
 gi|7524505|gb|AAB34217.2| paired box protein 8 isoform d [Homo sapiens]
 gi|119594037|gb|EAW73631.1| paired box gene 8, isoform CRA_c [Homo sapiens]
 gi|119594041|gb|EAW73635.1| paired box gene 8, isoform CRA_c [Homo sapiens]
          Length = 321

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|426226366|ref|XP_004007315.1| PREDICTED: paired box protein Pax-8 [Ovis aries]
          Length = 525

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|410978702|ref|XP_003995728.1| PREDICTED: paired box protein Pax-5 [Felis catus]
          Length = 423

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 103 RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 162

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 163 SVSSINRII 171



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 49  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 103


>gi|390979676|ref|NP_001254641.1| paired box protein Pax-5 [Equus caballus]
 gi|389831276|gb|AFL02664.1| PAX5 [Equus caballus]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|296190311|ref|XP_002743135.1| PREDICTED: paired box protein Pax-5 isoform 2 [Callithrix jacchus]
 gi|38885422|gb|AAR27592.1| BSAP splice variant delta8 [Homo sapiens]
 gi|119578703|gb|EAW58299.1| paired box gene 5 (B-cell lineage specific activator), isoform
           CRA_f [Homo sapiens]
          Length = 357

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|350579381|ref|XP_003122067.3| PREDICTED: paired box protein Pax-5 [Sus scrofa]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|345777609|ref|XP_854841.2| PREDICTED: paired box protein Pax-5 [Canis lupus familiaris]
          Length = 391

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (282), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|431913109|gb|ELK14859.1| Paired box protein Pax-8 [Pteropus alecto]
          Length = 446

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 89  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 148

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 149 SVSSINRII 157



 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 54/57 (94%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +SHGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 33  QSHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 89


>gi|45383313|ref|NP_989755.1| paired box protein Pax-5 [Gallus gallus]
 gi|4630779|dbj|BAA76951.1| Pax-5 [Gallus gallus]
          Length = 391

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|348570280|ref|XP_003470925.1| PREDICTED: paired box protein Pax-5-like [Cavia porcellus]
          Length = 390

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|301767072|ref|XP_002918959.1| PREDICTED: paired box protein Pax-5-like [Ailuropoda melanoleuca]
          Length = 395

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 75  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 134

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 135 SVSSINRII 143



 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 56/62 (90%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           ++   + HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL
Sbjct: 14  KMDKGKGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKIL 73

Query: 172 SR 173
            R
Sbjct: 74  GR 75


>gi|345308222|ref|XP_001509316.2| PREDICTED: paired box protein Pax-5-like [Ornithorhynchus anatinus]
          Length = 648

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 54/61 (88%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
             A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL 
Sbjct: 10  FAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILG 69

Query: 173 R 173
           R
Sbjct: 70  R 70


>gi|344271620|ref|XP_003407635.1| PREDICTED: paired box protein Pax-5-like [Loxodonta africana]
          Length = 403

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 83  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 142

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 143 SVSSINRII 151



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 29  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 83


>gi|223558219|gb|ACM91605.1| B cell specific activator protein variant A delta 5 [Homo sapiens]
          Length = 348

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 71  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 130

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 131 SVSSINRII 139



 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|360043629|emb|CCD81175.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 883

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVATA VV+AI  YK +NPTMFAWEIRDRLL + IC+ +NVP
Sbjct: 300 RYYETGSIRPGVIGGSKPKVATASVVEAICKYKEDNPTMFAWEIRDRLLKDQICTVENVP 359

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 360 SVSSINRIV 368



 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/64 (73%), Positives = 55/64 (85%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           R +   ++ HGG+NQLGGVFVNGRPLP+ VRQ+IV+LA+  VRPCDISRQLRVSHGCVSK
Sbjct: 237 RTKSNKAKGHGGINQLGGVFVNGRPLPNQVRQQIVQLANQNVRPCDISRQLRVSHGCVSK 296

Query: 170 ILSR 173
           IL R
Sbjct: 297 ILGR 300


>gi|281339806|gb|EFB15390.1| hypothetical protein PANDA_007504 [Ailuropoda melanoleuca]
          Length = 366

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 59  RYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 118

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 119 SVSSINRII 127



 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 5   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 59


>gi|33391193|gb|AAQ17211.1| paired and homeobox transcription factor [Tripedalia cystophora]
          Length = 527

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K G+IGGSKPKVAT  VV  IA YKR NPTMFAWEIRDRLL + +CSQ+NVP
Sbjct: 66  RYYETGSIKPGIIGGSKPKVATPGVVSKIAEYKRANPTMFAWEIRDRLLQDSVCSQENVP 125

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 126 SVSSINRIV 134



 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 53/57 (92%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            SHGGVNQLGGVFVNGRPLP+ VR+RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  ESHGGVNQLGGVFVNGRPLPEQVRRRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 66


>gi|56785870|gb|AAW29067.1| homeodomain transcription factor PaxB [Nematostella vectensis]
          Length = 525

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  R+YETGS K GVIGGSKPKVAT  VV  IA YK  NPTMFAWEIRDRLL+EG
Sbjct: 56  VSKILC--RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEG 113

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+ DNVPSVSSINR +
Sbjct: 114 VCTSDNVPSVSSINRIV 130



 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/59 (88%), Positives = 55/59 (93%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + + HGGVNQLGGVFVNGRPLPDVVRQRIVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 4   SKQGHGGVNQLGGVFVNGRPLPDVVRQRIVELAQSGVRPCDISRQLRVSHGCVSKILCR 62


>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
 gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
          Length = 525

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  R+YETGS K GVIGGSKPKVAT  VV  IA YK  NPTMFAWEIRDRLL+EG
Sbjct: 56  VSKILC--RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEG 113

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+ DNVPSVSSINR +
Sbjct: 114 VCTSDNVPSVSSINRIV 130



 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/59 (88%), Positives = 55/59 (93%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + + HGGVNQLGGVFVNGRPLPDVVRQRIVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 4   SKQGHGGVNQLGGVFVNGRPLPDVVRQRIVELAQSGVRPCDISRQLRVSHGCVSKILCR 62


>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
          Length = 298

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  R+YETGS K GVIGGSKPKVAT  VV  IA YK  NPTMFAWEIRDRLL+EG
Sbjct: 48  VSKILC--RFYETGSIKPGVIGGSKPKVATGNVVTKIAEYKLANPTMFAWEIRDRLLSEG 105

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+ DNVPSVSSINR +
Sbjct: 106 VCTSDNVPSVSSINRIV 122



 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/54 (94%), Positives = 52/54 (96%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPDVVRQRIVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   GGVNQLGGVFVNGRPLPDVVRQRIVELAQSGVRPCDISRQLRVSHGCVSKILCR 54


>gi|410955290|ref|XP_003984289.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 [Felis
           catus]
          Length = 457

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGXCDNDTVP 123

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 124 SVSSINRII 132



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|144369323|dbj|BAF56220.1| Pax-B [Anthopleura japonica]
          Length = 539

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  R+YETGS K GVIGGSKPKVAT  VV+ IA YK  NPTMFAWEIRDRLL+E 
Sbjct: 56  VSKILC--RFYETGSIKPGVIGGSKPKVATPGVVNKIAEYKMSNPTMFAWEIRDRLLSEN 113

Query: 66  ICSQDNVPSVSSINRYI 82
           +CS DNVPSVSSINR +
Sbjct: 114 VCSPDNVPSVSSINRIV 130



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/59 (86%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + + HGGVNQLGGVFVNGRPLPD VRQRIVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 4   SKQGHGGVNQLGGVFVNGRPLPDGVRQRIVELAQSGVRPCDISRQLRVSHGCVSKILCR 62


>gi|207079997|ref|NP_001128942.1| paired box protein Pax-8 isoform 1 [Pongo abelii]
 gi|75070686|sp|Q5R9M8.1|PAX8_PONAB RecName: Full=Paired box protein Pax-8
 gi|55729606|emb|CAH91532.1| hypothetical protein [Pongo abelii]
          Length = 457

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 65  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 124

Query: 74  SVSSINRYI 82
           SVSS NR I
Sbjct: 125 SVSSTNRII 133



 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/53 (90%), Positives = 51/53 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKIL 62


>gi|3551867|gb|AAC35286.1| B-cell specific transcription factor BSAP [Homo sapiens]
          Length = 136

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS K GVIGGSKPKVAT  VV+  A YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 10 RYYETGSIKPGVIGGSKPKVATPKVVEKFAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 69

Query: 74 SVSSINRYI 82
          SVSSINR I
Sbjct: 70 SVSSINRII 78


>gi|256077794|ref|XP_002575185.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 691

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVATA VV+AI  YK +NPTMFAWEIRDRLL + IC+ +NVP
Sbjct: 300 RYYETGSIRPGVIGGSKPKVATASVVEAICKYKEDNPTMFAWEIRDRLLKDQICTVENVP 359

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 360 SVSSINRIV 368



 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/64 (73%), Positives = 55/64 (85%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           R +   ++ HGG+NQLGGVFVNGRPLP+ VRQ+IV+LA+  VRPCDISRQLRVSHGCVSK
Sbjct: 237 RTKSNKAKGHGGINQLGGVFVNGRPLPNQVRQQIVQLANQNVRPCDISRQLRVSHGCVSK 296

Query: 170 ILSR 173
           IL R
Sbjct: 297 ILGR 300


>gi|68032725|gb|AAY84829.1| Pax2/5/8a [Oikopleura dioica]
          Length = 519

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV+ I  YKR NPTMFAWEIRDRLL+E +CSQ+NVP
Sbjct: 164 RFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQENVP 223

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 224 SVSSINRIV 232



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 51/54 (94%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGG++VNGRPLPD VRQ+IV++A  GVRPCDI+RQLRVSHGCVSKIL+R
Sbjct: 111 GGVNQLGGMYVNGRPLPDPVRQQIVDMAQRGVRPCDIARQLRVSHGCVSKILAR 164


>gi|63028383|gb|AAY27073.1| Pax2/5/8a [Oikopleura dioica]
          Length = 519

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV+ I  YKR NPTMFAWEIRDRLL+E +CSQ+NVP
Sbjct: 164 RFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQENVP 223

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 224 SVSSINRIV 232



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 51/54 (94%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGG++VNGRPLPD VRQ+IV++A  GVRPCDI+RQLRVSHGCVSKIL+R
Sbjct: 111 GGVNQLGGMYVNGRPLPDPVRQQIVDMAQRGVRPCDIARQLRVSHGCVSKILAR 164


>gi|47551159|ref|NP_999759.1| paired box protein [Strongylocentrotus purpuratus]
 gi|2394239|gb|AAB70247.1| paired box protein [Strongylocentrotus purpuratus]
          Length = 601

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K GVIGGSKPKVAT  VVD IA YKR+NPT+FAWEIRDRLL+E IC ++ VP
Sbjct: 108 RFYETGSIKPGVIGGSKPKVATRDVVDKIADYKRDNPTIFAWEIRDRLLSESICGKETVP 167

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 168 SVSSINRIL 176



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 51/68 (75%), Gaps = 3/68 (4%)

Query: 106 PDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHG 165
           P   R+R+  +    GVNQLGG F NGRPLP  +R +IVELA  GVRPCDISRQL+VSHG
Sbjct: 44  PKAKRRRLSDAE---GVNQLGGCFANGRPLPTQIRTQIVELAREGVRPCDISRQLKVSHG 100

Query: 166 CVSKILSR 173
           CVSKIL R
Sbjct: 101 CVSKILVR 108


>gi|313235562|emb|CBY11017.1| unnamed protein product [Oikopleura dioica]
          Length = 521

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV+ I  YKR NPTMFAWEIRDRLL+E +CSQ+NVP
Sbjct: 163 RFYETGSIRPGVIGGSKPKVATPHVVNKICEYKRANPTMFAWEIRDRLLSENVCSQENVP 222

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 223 SVSSINRIV 231



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 51/54 (94%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGG++VNGRPLPD VRQ+IV++A  GVRPCDI+RQLRVSHGCVSKIL+R
Sbjct: 110 GGVNQLGGMYVNGRPLPDPVRQQIVDMAQRGVRPCDIARQLRVSHGCVSKILAR 163


>gi|395398418|gb|AFN57632.1| Pax5 variant 1, partial [Mus musculus]
          Length = 248

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVI GSKPKVAT  VV+ IA YKR+NPTMFAWEIRDRLLAE +C  D VP
Sbjct: 42  RYYETGSIKPGVIEGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVP 101

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 102 SVSSINRII 110



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/42 (92%), Positives = 40/42 (95%)

Query: 132 GRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GRPLPDVVRQRI+ELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   GRPLPDVVRQRILELAHQGVRPCDISRQLRVSHGCVSKILGR 42


>gi|288176|emb|CAA39302.1| pax2 [Mus musculus]
          Length = 415

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFAWEIR +LL EGIC  D VP
Sbjct: 70  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRAQLLREGICDNDTVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138



 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 54/59 (91%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 70


>gi|297270587|ref|XP_001114995.2| PREDICTED: paired box protein Pax-5 isoform 2 [Macaca mulatta]
 gi|223558223|gb|ACM91607.1| B cell specific activator protein variant A delta 3/8 [Homo
           sapiens]
          Length = 291

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 17  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 71


>gi|449269107|gb|EMC79913.1| Paired box protein Pax-2-A, partial [Columba livia]
          Length = 430

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/53 (98%), Positives = 52/53 (98%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL
Sbjct: 7   HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKIL 59


>gi|334350731|gb|AEG77354.1| paired box 2 transcript variant 2 [Columba livia]
          Length = 291

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 53/55 (96%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 15  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 69



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VVD IA YKR+NPTMFA    DRLLAEGIC  D VP
Sbjct: 69  RYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAGRSWDRLLAEGICDNDTVP 128

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 129 SVSSINRII 137


>gi|410035604|ref|XP_003309249.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-8 [Pan
           troglodytes]
          Length = 389

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 57/68 (83%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VP
Sbjct: 64  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVP 123

Query: 74  SVSSINRY 81
           SVSSIN +
Sbjct: 124 SVSSINSH 131



 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 10  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 64


>gi|2394237|gb|AAB70246.1| paired box protein [Paracentrotus lividus]
          Length = 629

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K GVIGGSKPKVAT  VV+ IA YKR+NPT+FAWEIRDRLL+E +C +D VP
Sbjct: 122 RFYETGSIKPGVIGGSKPKVATGEVVNKIADYKRDNPTIFAWEIRDRLLSENVCVKDTVP 181

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 182 SVSSINRIL 190



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 46/53 (86%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGG F NGRPLP  +RQ+IVELA  GVRPCDISRQL+VSHGCVSKIL R
Sbjct: 70  GVNQLGGCFANGRPLPIQIRQQIVELAREGVRPCDISRQLKVSHGCVSKILVR 122


>gi|148236521|ref|NP_001081941.1| paired box protein Pax-8 [Xenopus laevis]
 gi|82248181|sp|Q9PUK5.1|PAX8_XENLA RecName: Full=Paired box protein Pax-8; Short=XPax-8
 gi|5815457|gb|AAD52681.1|AF179301_1 Pax-8 DNA-binding transcription factor [Xenopus laevis]
          Length = 465

 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLL +G+C  D VP
Sbjct: 81  RYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLTDGVCDNDTVP 140

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 141 SVSSINRII 149



 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLP+VVRQRIV+LAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 27  HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 81


>gi|118344268|ref|NP_001071959.1| transcription factor protein [Ciona intestinalis]
 gi|70570864|dbj|BAE06635.1| transcription factor protein [Ciona intestinalis]
          Length = 1284

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/69 (76%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  I  YKRENPTMFAWEIRDRLLA+ +CSQ+ VP
Sbjct: 510 RYYETGSIRPGVIGGSKPKVATHDVVMRITEYKRENPTMFAWEIRDRLLADEVCSQETVP 569

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 570 SVSSINRIV 578



 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/67 (70%), Positives = 57/67 (85%), Gaps = 1/67 (1%)

Query: 108 VVRQRIVASRSHGG-VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           V ++ + +   HGG VNQLGG++VNGRPLP+ +RQRIV L+H GVRPCDISRQLRVSHGC
Sbjct: 444 VAKEEVGSEDGHGGGVNQLGGMYVNGRPLPEPIRQRIVNLSHQGVRPCDISRQLRVSHGC 503

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 504 VSKILAR 510


>gi|3219278|dbj|BAA28833.1| HrPax-258 [Halocynthia roretzi]
          Length = 432

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV+ I  YKR+NPTMFAWEIRDRLL E IC  +NVP
Sbjct: 92  RYYETGSIKPGVIGGSKPKVATPRVVEKICEYKRQNPTMFAWEIRDRLLVECICDTENVP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRIV 160



 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/62 (80%), Positives = 56/62 (90%), Gaps = 1/62 (1%)

Query: 113 IVASRS-HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           +  SRS HGG+NQLGGV+VNGRPLPD VRQ IV+LAH GVRPCDI+RQLRVSHGCVSKIL
Sbjct: 31  LTPSRSGHGGINQLGGVYVNGRPLPDPVRQTIVDLAHQGVRPCDIARQLRVSHGCVSKIL 90

Query: 172 SR 173
           +R
Sbjct: 91  AR 92


>gi|194220480|ref|XP_001495977.2| PREDICTED: paired box protein Pax-8-like [Equus caballus]
          Length = 417

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 56/68 (82%)

Query: 15 YYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPS 74
          YYETGS + GVIGGSKPKVA   VV+ I  YKR+NPTMFAWEIRDRLLAEG+C  D VPS
Sbjct: 25 YYETGSIRPGVIGGSKPKVANPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS 84

Query: 75 VSSINRYI 82
          VSSINR I
Sbjct: 85 VSSINRII 92


>gi|56785872|gb|AAW29068.1| homeodomain transcription factor PaxC [Nematostella vectensis]
          Length = 458

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT PVV+ I  YK++NPT+FAWEIRDRL+ EGIC +DN P
Sbjct: 68  RYYETGSIRPGSIGGSKPKVATPPVVNKILQYKQQNPTIFAWEIRDRLVEEGICDRDNTP 127

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 128 SVSSINRIL 136



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLPD +R RI++LA  GVRPC+ISR L VSHGCVSKIL R
Sbjct: 14  HGGLNQLGGAFVNGRPLPDYIRHRIIQLATYGVRPCEISRCLLVSHGCVSKILGR 68


>gi|156377156|ref|XP_001630723.1| predicted protein [Nematostella vectensis]
 gi|156217749|gb|EDO38660.1| predicted protein [Nematostella vectensis]
          Length = 467

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT PVV+ I  YK++NPT+FAWEIRDRL+ EGIC +DN P
Sbjct: 77  RYYETGSIRPGSIGGSKPKVATPPVVNKILQYKQQNPTIFAWEIRDRLVEEGICDRDNTP 136

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 137 SVSSINRIL 145



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGG+NQLGG FVNGRPLPD +R RI++LA  GVRPC+ISR+L VSHGCVSKIL R
Sbjct: 23  HGGLNQLGGAFVNGRPLPDYIRHRIIQLATYGVRPCEISRRLLVSHGCVSKILGR 77


>gi|283365209|dbj|BAI66187.1| transcription factor Pax-2/5/8 [Microciona prolifera]
          Length = 576

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV  I  YK+ENP++FAWEIRDRLL EGIC + NVP
Sbjct: 67  RYYETGSIKPGVIGGSKPKVATPNVVSKIEDYKQENPSIFAWEIRDRLLQEGICDKANVP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRIV 135



 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/60 (76%), Positives = 55/60 (91%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            A +  GGVNQLGGVFVNGRPLP+++R++IVEL+++GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 8   AAGQGQGGVNQLGGVFVNGRPLPEIIRRKIVELSNSGVRPCDISRQLRVSHGCVSKILGR 67


>gi|358339151|dbj|GAA47267.1| paired box protein Pax-8 [Clonorchis sinensis]
          Length = 1033

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/69 (73%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VVDAI  YK ++PTMFAWEIRDRLL + +C+ DNVP
Sbjct: 299 RYYETGSIRPGVIGGSKPKVATPSVVDAICKYKEDSPTMFAWEIRDRLLKDHVCTPDNVP 358

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 359 SVSSINRIV 367



 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/64 (71%), Positives = 55/64 (85%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           R ++   + HGG+NQLGGVFVNGRPLP+ +RQ+IV+LA+  VRPCDISRQLRVSHGCVSK
Sbjct: 236 RNKLGKVKGHGGINQLGGVFVNGRPLPNQIRQQIVQLANQNVRPCDISRQLRVSHGCVSK 295

Query: 170 ILSR 173
           IL R
Sbjct: 296 ILGR 299


>gi|340715062|ref|XP_003396039.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
 gi|350414727|ref|XP_003490400.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
          Length = 514

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 89  RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRVL 157



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 35  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 89


>gi|167859583|gb|ACA04746.1| PaxB [Amphimedon queenslandica]
          Length = 552

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K G+IGGSKPKVAT  VV+ I  YKRENP++FAWEIRDRLL EGIC++ NVP
Sbjct: 62  RFYETGSVKPGIIGGSKPKVATPKVVNKIEDYKRENPSIFAWEIRDRLLTEGICNKVNVP 121

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 122 SVSSINRIV 130



 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/54 (88%), Positives = 52/54 (96%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPD++R++IVELA NGVRPCDISRQLRVSHGCVSKIL R
Sbjct: 9   GGVNQLGGVFVNGRPLPDIIRRKIVELAQNGVRPCDISRQLRVSHGCVSKILGR 62


>gi|340372751|ref|XP_003384907.1| PREDICTED: hypothetical protein LOC100632785 [Amphimedon
           queenslandica]
          Length = 493

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K G+IGGSKPKVAT  VV+ I  YKRENP++FAWEIRDRLL EGIC++ NVP
Sbjct: 62  RFYETGSVKPGIIGGSKPKVATPKVVNKIEDYKRENPSIFAWEIRDRLLTEGICNKVNVP 121

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 122 SVSSINRIV 130



 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            S   GGVNQLGGVFVNGRPLPD++R++IVELA NGVRPCDISRQLRVSHGCVSKIL R
Sbjct: 4   GSAGQGGVNQLGGVFVNGRPLPDIIRRKIVELAQNGVRPCDISRQLRVSHGCVSKILGR 62


>gi|383859947|ref|XP_003705453.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
          Length = 628

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 203 RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 262

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 263 SVSSINRVL 271



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 149 HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 203


>gi|307189169|gb|EFN73617.1| Paired box protein Pax-6 [Camponotus floridanus]
          Length = 516

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 89  RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRVL 157



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 35  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 89


>gi|307211180|gb|EFN87393.1| Paired box protein Pax-6 [Harpegnathos saltator]
          Length = 506

 Score =  109 bits (273), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 115 RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 174

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 175 SVSSINRVL 183



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 61  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 115


>gi|345496344|ref|XP_001602823.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
          Length = 522

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 87  RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRVL 155



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 33  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 87


>gi|332022174|gb|EGI62491.1| Paired box protein Pax-6 [Acromyrmex echinatior]
          Length = 631

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 204 RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 263

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 264 SVSSINRVL 272



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 150 HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 204


>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
 gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
          Length = 497

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 5/91 (5%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETG+ +   IGGSKP+VAT  VV+ IASYKRE P++FAWEIRDRLL EGIC+ DN+P
Sbjct: 81  RYYETGTIRPRAIGGSKPRVATPEVVNKIASYKRECPSIFAWEIRDRLLNEGICNNDNIP 140

Query: 74  SVSSINRYITYVPIGHGGVNQLGG-VFVNGR 103
           SVSSINR +  +     G +Q GG +  NGR
Sbjct: 141 SVSSINRVLRNL----NGDHQTGGFIETNGR 167



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H G+NQLGG+FVNGRPLPD +RQ+IVE AHNG RPCDISR L+VS+GCVSKIL+R
Sbjct: 25  KGHSGMNQLGGMFVNGRPLPDSIRQKIVEFAHNGARPCDISRILQVSNGCVSKILAR 81


>gi|270006382|gb|EFA02830.1| twin of eyeless [Tribolium castaneum]
          Length = 524

 Score =  108 bits (271), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA +KRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 146 RYYETGSIKPRAIGGSKPRVATQPVVNKIAEFKRECPSIFAWEIRDRLLSEGVCNNDNIP 205

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 206 SVSSINRVL 214



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 92  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 146


>gi|4519625|dbj|BAA75672.1| DjPax-6 [Dugesia japonica]
          Length = 550

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 63/77 (81%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT+ VV  IA+YKRE P++F+WEIRDRLL EG
Sbjct: 67  VSKILC--RYYETGSIRPKAIGGSKPRVATSSVVSKIAAYKRECPSIFSWEIRDRLLQEG 124

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+QDN+PSVSSINR +
Sbjct: 125 VCNQDNIPSVSSINRVL 141



 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 54/67 (80%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           D ++ +    R H G+NQLGG+FVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GC
Sbjct: 7   DEIKNKKKVKRGHSGINQLGGMFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGC 66

Query: 167 VSKILSR 173
           VSKIL R
Sbjct: 67  VSKILCR 73


>gi|2102734|gb|AAB58294.1| Pax-B [Chrysaora quinquecirrha]
          Length = 127

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/69 (75%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT  VV  IA YK  NPTMFAWEIRDRLL + +C+Q+NVP
Sbjct: 56  RYYETGSIKPGVIGGSKPKVATPMVVGKIADYKIANPTMFAWEIRDRLLLDSVCTQENVP 115

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 116 SVSSINRIV 124



 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGG+FVNGRPLP+ VR+RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 2   HGGVNQLGGMFVNGRPLPEPVRRRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 56


>gi|8920364|emb|CAB96397.1| transcription factor [Phallusia mammillata]
          Length = 680

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/69 (73%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  I  YKR+NPTMFAWEIRDRLL++GIC+ + VP
Sbjct: 141 RYYETGSIRPGVIGGSKPKVATQDVVVKITEYKRDNPTMFAWEIRDRLLSDGICTGETVP 200

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 201 SVSSINRIV 209



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/56 (82%), Positives = 52/56 (92%), Gaps = 1/56 (1%)

Query: 119 HG-GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HG GVNQLGG++VNGRPLP+ +RQRIV L+H GVRPCDISRQLRVSHGCVSKIL+R
Sbjct: 86  HGSGVNQLGGMYVNGRPLPEPIRQRIVNLSHQGVRPCDISRQLRVSHGCVSKILAR 141


>gi|386783703|gb|AFJ24746.1| Pax6A [Schmidtea mediterranea]
          Length = 564

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 63/77 (81%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT+ VV  IA+YKRE P++F+WEIRDRLL EG
Sbjct: 81  VSKILC--RYYETGSIRPKAIGGSKPRVATSSVVSKIAAYKRECPSIFSWEIRDRLLQEG 138

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+QDN+PSVSSINR +
Sbjct: 139 VCNQDNIPSVSSINRVL 155



 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 4/85 (4%)

Query: 93  NQLGGVFVNGRPLPDV----VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAH 148
           N  G    + +P+ +     ++ +    R H G+NQLGG+FVNGRPLPD  RQRIVELAH
Sbjct: 3   NTFGENHFDSKPMTESNEEEIKNKKKVKRGHSGINQLGGMFVNGRPLPDSTRQRIVELAH 62

Query: 149 NGVRPCDISRQLRVSHGCVSKILSR 173
           +G RPCDISR L+VS+GCVSKIL R
Sbjct: 63  SGARPCDISRILQVSNGCVSKILCR 87


>gi|144369326|dbj|BAF56221.1| Pax-C [Anthopleura japonica]
          Length = 462

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT PVV  I  YK++NPT+FAWEIRDRL+ EGIC ++N P
Sbjct: 76  RYYETGSIRPGSIGGSKPKVATPPVVSKILQYKQQNPTIFAWEIRDRLVEEGICDRENTP 135

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 136 SVSSINRIL 144



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++HGG+NQLGG FVNGRPLPD +R RI++LA  GVRPC+ISR+L VSHGCVSKIL R
Sbjct: 20  QNHGGMNQLGGAFVNGRPLPDYIRHRIIQLAAYGVRPCEISRRLLVSHGCVSKILGR 76


>gi|18448647|gb|AAL69891.1| Pax2 protein [Mus musculus]
          Length = 69

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/57 (92%), Positives = 53/57 (92%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           A   HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL
Sbjct: 12  AMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKIL 68


>gi|432860293|ref|XP_004069487.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
          Length = 433

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 2/88 (2%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAEG+CS DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLAEGVCSNDNIP 137

Query: 74  SVSSINRYITYVPIGHGGVNQLG--GVF 99
           SVSSINR +  +      +  LG  G+F
Sbjct: 138 SVSSINRVLRNLASDKQQMGSLGTEGMF 165



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|312065348|ref|XP_003135747.1| pax transcription factor protein 2 [Loa loa]
          Length = 332

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 49  SHTGVNQLGGVFVNGRPLPDHIRNRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 104



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA+YKR NPTMFAWEIR++LL E +C  +NVP
Sbjct: 104 RYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAENVP 163

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 164 SVSSINRIV 172


>gi|393909109|gb|EFO28340.2| pax transcription factor protein 2, partial [Loa loa]
          Length = 352

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 69  SHTGVNQLGGVFVNGRPLPDHIRNRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 124



 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA+YKR NPTMFAWEIR++LL E +C  +NVP
Sbjct: 124 RYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAENVP 183

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 184 SVSSINRIV 192


>gi|223558209|gb|ACM91600.1| B cell specific activator protein variant B delta 3/4 [Homo
           sapiens]
          Length = 108

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/69 (79%), Positives = 58/69 (84%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRESNLH 178
           HGGVNQLGGVFVNGRPLPDVVRQRIVELAH GVRPCDISRQLRVSHGCVSKIL     L 
Sbjct: 16  HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGSVHWLR 75

Query: 179 NYRLVREEG 187
           +  ++ E G
Sbjct: 76  DAGVLGEHG 84


>gi|170588929|ref|XP_001899226.1| Pax  transcription factor protein 2 [Brugia malayi]
 gi|158593439|gb|EDP32034.1| Pax transcription factor protein 2, putative [Brugia malayi]
          Length = 360

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA+YKR NPTMFAWEIR++LL E +C  +NVP
Sbjct: 104 RYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDSENVP 163

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 164 SVSSINRIV 172



 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 49  SHTGVNQLGGVFVNGRPLPDHIRNRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 104


>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
 gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
 gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
 gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
 gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
          Length = 543

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
          Length = 543

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|442614511|ref|NP_001259080.1| twin of eyeless, isoform C [Drosophila melanogaster]
 gi|440218170|gb|AGB96570.1| twin of eyeless, isoform C [Drosophila melanogaster]
          Length = 526

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|195564338|ref|XP_002105777.1| GD24416 [Drosophila simulans]
 gi|194201653|gb|EDX15229.1| GD24416 [Drosophila simulans]
          Length = 342

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
 gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
          Length = 543

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
 gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
          Length = 543

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
 gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
          Length = 543

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 30  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 84


>gi|328716918|ref|XP_003246075.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 571

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+CS DN+P
Sbjct: 88  RYYETGSIKPRAIGGSKPRVATNGVVNKIADYKRECPSIFAWEIRDRLLSEGVCSNDNIP 147

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 148 SVSSINRVL 156



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 34  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 88


>gi|357630890|gb|EHJ78711.1| twin of eyeless [Danaus plexippus]
          Length = 409

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 61  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSENVCNNDNIP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRVL 129



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 18/24 (75%), Positives = 20/24 (83%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQ 111
           GH G+NQLGGV+VNGRPLPD   Q
Sbjct: 23  GHSGINQLGGVYVNGRPLPDSTLQ 46



 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 18/27 (66%), Positives = 21/27 (77%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQ 141
           +S  H G+NQLGGV+VNGRPLPD   Q
Sbjct: 20  SSAGHSGINQLGGVYVNGRPLPDSTLQ 46


>gi|195134022|ref|XP_002011437.1| GI14042 [Drosophila mojavensis]
 gi|193912060|gb|EDW10927.1| GI14042 [Drosophila mojavensis]
          Length = 569

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 89  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRVL 157



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 35  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 89


>gi|328716920|ref|XP_001944246.2| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
           pisum]
          Length = 622

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+CS DN+P
Sbjct: 139 RYYETGSIKPRAIGGSKPRVATNGVVNKIADYKRECPSIFAWEIRDRLLSEGVCSNDNIP 198

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 199 SVSSINRVL 207



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 85  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 139


>gi|195450696|ref|XP_002072593.1| GK13683 [Drosophila willistoni]
 gi|194168678|gb|EDW83579.1| GK13683 [Drosophila willistoni]
          Length = 552

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 85  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 144

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 145 SVSSINRVL 153



 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 31  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 85


>gi|195064095|ref|XP_001996496.1| GH23963 [Drosophila grimshawi]
 gi|193892042|gb|EDV90908.1| GH23963 [Drosophila grimshawi]
          Length = 545

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 88  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 147

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 148 SVSSINRVL 156



 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 34  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 88


>gi|339241875|ref|XP_003376863.1| paired box protein Pax-6 [Trichinella spiralis]
 gi|316974400|gb|EFV57892.1| paired box protein Pax-6 [Trichinella spiralis]
          Length = 419

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VVD IA YKRE P++FAWEIRDRLL E 
Sbjct: 94  VSKILC--RYYETGSIRPRAIGGSKPRVATNKVVDKIADYKRECPSIFAWEIRDRLLQEN 151

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+QDN+PSVSSINR +
Sbjct: 152 VCNQDNIPSVSSINRVL 168



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+I+ELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 46  HTGVNQLGGVFVNGRPLPDSTRQKIIELAHQGARPCDISRILQVSNGCVSKILCR 100


>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
 gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
 gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
 gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
          Length = 546

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 85  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 144

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 145 SVSSINRVL 153



 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 31  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 85


>gi|348523547|ref|XP_003449285.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
          Length = 715

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 3/89 (3%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAEG+C+ DN+P
Sbjct: 356 RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLAEGVCTNDNIP 415

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNG 102
           SVSSINR +  +        Q+G V   G
Sbjct: 416 SVSSINRVLRNLA---SDKQQMGTVGAEG 441



 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 301 SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 356


>gi|324529117|gb|ADY48990.1| Paired box protein Pax-5, partial [Ascaris suum]
          Length = 210

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA+YKR NPTMFAWEIR++LL E +C  +NVP
Sbjct: 84  RYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEERVCDAENVP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRIV 152



 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 29  SHTGVNQLGGVFVNGRPLPDHIRNRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 84


>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
          Length = 496

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 4/86 (4%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETG+ +   IGGSKP+VAT  VV+ IASYKRE P++FAWEIRDRLL EGIC+ DN+P
Sbjct: 81  RYYETGTIRPRAIGGSKPRVATPEVVNKIASYKRECPSIFAWEIRDRLLNEGICNNDNIP 140

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVF 99
           SVSSINR +  +     G +Q GG  
Sbjct: 141 SVSSINRVLRNL----NGDHQTGGFI 162



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H G+NQLGG+FVNGRPLPD +RQ+IVE AHNG RPCDISR L+VS+GCVSKIL+R
Sbjct: 25  KGHSGMNQLGGMFVNGRPLPDSIRQKIVEFAHNGARPCDISRILQVSNGCVSKILAR 81


>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
 gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
 gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
          Length = 549

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 88  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIP 147

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 148 SVSSINRVL 156



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 34  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 88


>gi|383210367|dbj|BAM08280.1| twin of eyeless, partial [Gryllus bimaculatus]
          Length = 213

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS K  VIGGSKP+VAT+ VV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 6  RYYETGSIKPRVIGGSKPRVATSNVVSKIADYKRECPSIFAWEIRDRLLSEAVCTNDNIP 65

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 66 SVSSINRVL 74


>gi|7335704|gb|AAC15711.2| PaxC transcription factor [Acropora millepora]
          Length = 464

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + G IGGSKPKVAT PVV+ I  YK++NPT+FAWEIRDRL+ EG+C ++N P
Sbjct: 66  RFYETGSIRPGSIGGSKPKVATPPVVNKIVQYKQQNPTIFAWEIRDRLVEEGVCDRENTP 125

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 126 SVSSINRIL 134



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +SHGG+NQLGG FVNGRPLPD +R RIV+LA  GVRPC+ISR+L VSHGCVSKIL R
Sbjct: 10  QSHGGINQLGGPFVNGRPLPDYIRHRIVQLAACGVRPCEISRRLLVSHGCVSKILGR 66


>gi|324515317|gb|ADY46163.1| Paired box protein Pax-5 [Ascaris suum]
          Length = 348

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/56 (89%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 56  SHTGVNQLGGVFVNGRPLPDHIRNRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 111



 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 57/83 (68%), Gaps = 14/83 (16%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLL----------- 62
           RYYETGS + GVIGGSKPKVAT  VV  IA+YKR NPTMFAWEIR++LL           
Sbjct: 111 RYYETGSIRPGVIGGSKPKVATPKVVQTIAAYKRANPTMFAWEIREKLLEAERRQILRRW 170

Query: 63  ---AEGICSQDNVPSVSSINRYI 82
               E +C  +NVPSVSSINR +
Sbjct: 171 ALIQERVCDAENVPSVSSINRIV 193


>gi|295983611|gb|ADG63459.1| Pax-B [Crepidula fornicata]
          Length = 162

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  R+ ETGS K GVIGGSKPKVAT  VV AI+ YK ENPTMFAWEIRD+L+A+ 
Sbjct: 79  VSKILC--RFQETGSTKPGVIGGSKPKVATPQVVGAISRYKAENPTMFAWEIRDKLIADQ 136

Query: 66  ICSQDNVPSVSSINRYI 82
           +CS DN PSVSSINR +
Sbjct: 137 VCSPDNAPSVSSINRIV 153



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLPD VR RIV+L+  G+RPC+ISR+LRVSHGCVSKIL R
Sbjct: 31  HGGVNQLGGVFVNGRPLPDSVRTRIVKLSQEGIRPCEISRRLRVSHGCVSKILCR 85


>gi|15741042|gb|AAK26167.1| Pax6A [Girardia tigrina]
          Length = 464

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 6  LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
          ++  LC  RYYETGS +   IGGSKP VAT+ VV   A+YKRE P++F+WEIRDRLL EG
Sbjct: 3  VSKILC--RYYETGSIRPKAIGGSKPTVATSSVVSKTAAYKRECPSIFSWEIRDRLLQEG 60

Query: 66 ICSQDNVPSVSSINRYI 82
          +C+QDN+PSVSSINR +
Sbjct: 61 VCNQDNIPSVSSINRVL 77


>gi|6465862|emb|CAB61522.1| paired box protein [Podocoryna carnea]
          Length = 711

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 52/55 (94%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           HGGVNQLGGVFVNGRPLP+ VR++IVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 75  HGGVNQLGGVFVNGRPLPEPVRRKIVELAHQGVRPCDISRQLRVSHGCVSKILGR 129



 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + GVIGGSKPKVAT  VV  IA YK  NPTMFAWEIR+RLL + IC  ++VP
Sbjct: 129 RYYETGSIRPGVIGGSKPKVATPSVVTKIAEYKIHNPTMFAWEIRERLLNDQICDVESVP 188

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 189 SVSSINRIV 197


>gi|270006446|gb|EFA02894.1| eyeless [Tribolium castaneum]
          Length = 453

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+SYKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 60  RYYETGSIRPRAIGGSKPRVATAEVVSKISSYKRECPSIFAWEIRDRLLQEGVCTNDNIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A + H GVNQLGGVFV+GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   MAHKGHSGVNQLGGVFVSGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
 gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
          Length = 545

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  I+ YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 84  RYYETGSIKPRAIGGSKPRVATTPVVQKISDYKRECPSIFAWEIRDRLLSEQVCNSDNIP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRVL 152



 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 2/77 (2%)

Query: 99  FVNGRPLPDVVRQRIV--ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDI 156
            ++G P   V +  I   ++  H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDI
Sbjct: 8   IMHGHPHSSVSQSAIFGCSTAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDI 67

Query: 157 SRQLRVSHGCVSKILSR 173
           SR L+VS+GCVSKIL R
Sbjct: 68  SRILQVSNGCVSKILGR 84


>gi|449682944|ref|XP_002159617.2| PREDICTED: uncharacterized protein LOC100192231 [Hydra
           magnipapillata]
 gi|89242120|dbj|BAA36345.2| Pax-2/5/8 [Hydra vulgaris]
          Length = 603

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/74 (66%), Positives = 57/74 (77%)

Query: 100 VNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQ 159
           +N +   D    +     +HGG+NQLGG FVNGRPL + VR++IVELAH GVRPCDISRQ
Sbjct: 66  INIKRFNDAKENKNTCRDNHGGINQLGGTFVNGRPLIEPVRRKIVELAHQGVRPCDISRQ 125

Query: 160 LRVSHGCVSKILSR 173
           LRVSHGCVSKILSR
Sbjct: 126 LRVSHGCVSKILSR 139



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV  I  YK+ NPTMFAWEIRD+LL+E IC  D+VP
Sbjct: 139 RFYETGSVRPGVIGGSKPKVATPSVVAKIQEYKQHNPTMFAWEIRDKLLSEQICDSDSVP 198

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 199 SVSSINRIV 207


>gi|160333791|ref|NP_001103907.1| eyeless [Tribolium castaneum]
 gi|158187657|gb|ABW23132.1| eyeless [Tribolium castaneum]
          Length = 453

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+SYKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 60  RYYETGSIRPRAIGGSKPRVATAEVVSKISSYKRECPSIFAWEIRDRLLQEGVCTNDNIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A + H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   MAHKGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|156915254|emb|CAO99176.1| Pax-6 transcription factor [Brachionus plicatilis]
          Length = 336

 Score =  106 bits (264), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV  IA YKRE P++FAWEIRDRLL E +C+QDN+P
Sbjct: 103 RYYETGSIKPRAIGGSKPRVATSDVVAKIAGYKRECPSIFAWEIRDRLLNENVCNQDNIP 162

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 163 SVSSINRVL 171



 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH G RPCDISR L+VS+GCVSKILSR
Sbjct: 49  HSGVNQLGGVFVNGRPLPDGTRQKIVELAHQGARPCDISRMLQVSNGCVSKILSR 103


>gi|353232519|emb|CCD79874.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 1368

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 2/80 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL EG
Sbjct: 57  VSKILC--RYYETGSIRPKAIGGSKPRVATNLVVLKIAHYKRECPSIFAWEIRDRLLQEG 114

Query: 66  ICSQDNVPSVSSINRYITYV 85
           IC+ +N+PSVSSINR +  V
Sbjct: 115 ICTTENIPSVSSINRVLRNV 134



 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ H GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   NKRHSGVNQLGGMFVNGRPLPDTTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 63


>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
          Length = 503

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EG+C+QDN+P
Sbjct: 110 RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQDNIP 169

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 170 SVSSINRVL 178



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 56  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 110


>gi|8132381|gb|AAF73270.1| paired domain transcription factor variant B [Xenopus laevis]
          Length = 390

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQSQAEAKVPGLDSQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|1778017|gb|AAB40616.1| Pax-6 [Doryteuthis opalescens]
          Length = 460

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EG+C+QDN+P
Sbjct: 67  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQDNIP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRVL 135



 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 13  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 67


>gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis]
          Length = 422

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|2495315|sp|P55864.1|PAX6_XENLA RecName: Full=Paired box protein Pax-6
 gi|1685056|gb|AAB36683.1| Pax6 [Xenopus laevis]
          Length = 422

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|328719785|ref|XP_003246859.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 594

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL EG+CS DN+P
Sbjct: 108 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCSNDNIP 167

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 168 SVSSINRVL 176



 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A + H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 49  LAHKGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 108


>gi|4107113|dbj|BAA36346.1| Pax-2/5/8 [Ephydatia fluviatilis]
          Length = 599

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 50/69 (72%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K GVIGGSKPKVAT+ VV  I  YK+ENP++FAWEIRDRLL +G+C + NVP
Sbjct: 63  RYYETGSIKPGVIGGSKPKVATSKVVLKIEDYKQENPSIFAWEIRDRLLQDGVCDKVNVP 122

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 123 SVSSINRIV 131



 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/59 (76%), Positives = 52/59 (88%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            +   GGVNQLGG+FVNGRPLP+ +R++IVEL+ NGVRPCDISRQLRVSHGCVSKIL R
Sbjct: 5   GASGQGGVNQLGGLFVNGRPLPESIRRKIVELSQNGVRPCDISRQLRVSHGCVSKILGR 63


>gi|328719783|ref|XP_003246858.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328719787|ref|XP_003246860.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Acyrthosiphon
           pisum]
          Length = 613

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL EG+CS DN+P
Sbjct: 127 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCSNDNIP 186

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 187 SVSSINRVL 195



 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 4/66 (6%)

Query: 112 RIVASRS----HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCV 167
           RI+A+R     H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCV
Sbjct: 62  RIIATRELDLGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCV 121

Query: 168 SKILSR 173
           SKIL R
Sbjct: 122 SKILGR 127


>gi|189313483|gb|ACD88758.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 145

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   KGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a [Rattus norvegicus]
 gi|44922126|gb|AAS48920.1| paired box 6 isoform 5a [Rattus norvegicus]
          Length = 436

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|18138026|emb|CAC80515.1| paired box protein [Mus musculus]
          Length = 157

 Score =  105 bits (263), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|42592306|emb|CAF29075.1| putative pax6 isoform 5a [Rattus norvegicus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|34364871|emb|CAE45868.1| hypothetical protein [Homo sapiens]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|1685047|gb|AAB36681.1| paired-type homeodomain Pax-6 protein [Xenopus laevis]
          Length = 453

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 35  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 90


>gi|306754627|gb|ADN04686.1| Pax6 [Rattus norvegicus]
          Length = 434

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|126723718|ref|NP_001075686.1| paired box protein Pax-6 [Oryctolagus cuniculus]
 gi|77547037|gb|ABA90485.1| paired box protein PAX6 isoform b [Oryctolagus cuniculus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|410929047|ref|XP_003977911.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Takifugu
           rubripes]
          Length = 448

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 50/68 (73%), Gaps = 12/68 (17%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------RVSHG 165
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +VS+G
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDAVQVLDSEKVSNG 82

Query: 166 CVSKILSR 173
           CVSKIL R
Sbjct: 83  CVSKILGR 90


>gi|348557450|ref|XP_003464532.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Cavia
           porcellus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xenopus laevis]
          Length = 421

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|432852507|ref|XP_004067282.1| PREDICTED: paired box protein Pax-6 isoform 2 [Oryzias latipes]
          Length = 449

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 50/68 (73%), Gaps = 12/68 (17%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------RVSHG 165
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +VS+G
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDEVQVLDSEKVSNG 82

Query: 166 CVSKILSR 173
           CVSKIL R
Sbjct: 83  CVSKILGR 90


>gi|2102728|gb|AAB58291.1| Pax-B [Hydra littoralis]
          Length = 607

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 49/74 (66%), Positives = 57/74 (77%)

Query: 100 VNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQ 159
           +N +   D    +     +HGG+NQLGG FVNGRPL + VR++IVELAH GVRPCDISRQ
Sbjct: 66  INIKRFNDAKENKNTCRDNHGGINQLGGTFVNGRPLIEPVRRKIVELAHQGVRPCDISRQ 125

Query: 160 LRVSHGCVSKILSR 173
           LRVSHGCVSKILSR
Sbjct: 126 LRVSHGCVSKILSR 139



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV  I  YK+ NPTMFAWEIRD+LL+E IC  D+VP
Sbjct: 139 RFYETGSVRPGVIGGSKPKVATPSVVAKIQEYKQHNPTMFAWEIRDKLLSEQICDSDSVP 198

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 199 SVSSINRIV 207


>gi|410929045|ref|XP_003977910.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Takifugu
           rubripes]
          Length = 388

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|4580424|ref|NP_001595.2| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|386642911|ref|NP_001245391.1| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|386642913|ref|NP_001245392.1| paired box protein Pax-6 isoform b [Homo sapiens]
 gi|301764208|ref|XP_002917525.1| PREDICTED: paired box protein Pax-6-like [Ailuropoda melanoleuca]
 gi|390470364|ref|XP_002755188.2| PREDICTED: paired box protein Pax-6 isoform 1 [Callithrix jacchus]
 gi|390470366|ref|XP_003734277.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|390470368|ref|XP_003734278.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|397520715|ref|XP_003830457.1| PREDICTED: paired box protein Pax-6 isoform 4 [Pan paniscus]
 gi|397520717|ref|XP_003830458.1| PREDICTED: paired box protein Pax-6 isoform 5 [Pan paniscus]
 gi|397520719|ref|XP_003830459.1| PREDICTED: paired box protein Pax-6 isoform 6 [Pan paniscus]
 gi|403254508|ref|XP_003920007.1| PREDICTED: paired box protein Pax-6 isoform 4 [Saimiri boliviensis
           boliviensis]
 gi|403254510|ref|XP_003920008.1| PREDICTED: paired box protein Pax-6 isoform 5 [Saimiri boliviensis
           boliviensis]
 gi|403254512|ref|XP_003920009.1| PREDICTED: paired box protein Pax-6 isoform 6 [Saimiri boliviensis
           boliviensis]
 gi|410973488|ref|XP_003993181.1| PREDICTED: paired box protein Pax-6 isoform 4 [Felis catus]
 gi|410973490|ref|XP_003993182.1| PREDICTED: paired box protein Pax-6 isoform 5 [Felis catus]
 gi|410973492|ref|XP_003993183.1| PREDICTED: paired box protein Pax-6 isoform 6 [Felis catus]
 gi|410973494|ref|XP_003993184.1| PREDICTED: paired box protein Pax-6 isoform 7 [Felis catus]
 gi|426367844|ref|XP_004050931.1| PREDICTED: paired box protein Pax-6 isoform 4 [Gorilla gorilla
           gorilla]
 gi|426367846|ref|XP_004050932.1| PREDICTED: paired box protein Pax-6 isoform 5 [Gorilla gorilla
           gorilla]
 gi|426367850|ref|XP_004050934.1| PREDICTED: paired box protein Pax-6 isoform 7 [Gorilla gorilla
           gorilla]
 gi|326205307|dbj|BAJ84032.1| paired box protein Pax-6 [Homo sapiens]
 gi|326205309|dbj|BAJ84033.1| paired box protein Pax-6 [Homo sapiens]
 gi|326205311|dbj|BAJ84034.1| paired box protein Pax-6 [Homo sapiens]
 gi|380813236|gb|AFE78492.1| paired box protein Pax-6 isoform b [Macaca mulatta]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|432852509|ref|XP_004067283.1| PREDICTED: paired box protein Pax-6 isoform 3 [Oryzias latipes]
          Length = 457

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 98  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 157

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 158 SVSSINRVL 166



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 12/72 (16%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------R 161
           ++   H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +
Sbjct: 27  ISDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDEVQVLDSEK 86

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 87  VSNGCVSKILGR 98


>gi|7305369|ref|NP_038655.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|346644677|ref|NP_001231127.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|346644705|ref|NP_001231129.1| paired box protein Pax-6 isoform 1 [Mus musculus]
 gi|354470765|ref|XP_003497615.1| PREDICTED: paired box protein Pax-6 isoform 2 [Cricetulus griseus]
 gi|1405744|emb|CAA45379.1| Pax-6 (paired box containing gene) [Mus musculus]
 gi|15277449|gb|AAH11272.1| Paired box gene 6 [Mus musculus]
 gi|18138034|emb|CAC80519.1| paired box protein [Mus musculus]
 gi|148695799|gb|EDL27746.1| paired box gene 6, isoform CRA_b [Mus musculus]
 gi|148695802|gb|EDL27749.1| paired box gene 6, isoform CRA_b [Mus musculus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|1669589|dbj|BAA13681.1| Xenopus Pax-6 short [Xenopus laevis]
          Length = 370

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|391333106|ref|XP_003740963.1| PREDICTED: paired box protein Pax-6-like [Metaseiulus occidentalis]
          Length = 551

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DNVP
Sbjct: 87  RYYETGSIRPRAIGGSKPRVATPDVVNKIAEYKRECPSIFAWEIRDRLLSEGVCNNDNVP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRVL 155



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 33  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 87


>gi|402893913|ref|XP_003910125.1| PREDICTED: paired box protein Pax-6 isoform 4 [Papio anubis]
 gi|402893915|ref|XP_003910126.1| PREDICTED: paired box protein Pax-6 isoform 5 [Papio anubis]
 gi|402893919|ref|XP_003910128.1| PREDICTED: paired box protein Pax-6 isoform 7 [Papio anubis]
 gi|402893921|ref|XP_003910129.1| PREDICTED: paired box protein Pax-6 isoform 8 [Papio anubis]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|327259827|ref|XP_003214737.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Anolis
           carolinensis]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|432852505|ref|XP_004067281.1| PREDICTED: paired box protein Pax-6 isoform 1 [Oryzias latipes]
 gi|3914281|sp|O73917.1|PAX6_ORYLA RecName: Full=Paired box protein Pax-6
 gi|3115324|emb|CAA04395.1| Pax6 [Oryzias latipes]
          Length = 437

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|355752241|gb|EHH56361.1| hypothetical protein EGM_05752, partial [Macaca fascicularis]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 50/72 (69%), Gaps = 14/72 (19%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR-------------- 161
           S  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              
Sbjct: 2   SSGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQN 61

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 62  VSNGCVSKILGR 73


>gi|348509486|ref|XP_003442279.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Oreochromis
           niloticus]
          Length = 449

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 50/68 (73%), Gaps = 12/68 (17%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------RVSHG 165
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +VS+G
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDEVQVLDSEKVSNG 82

Query: 166 CVSKILSR 173
           CVSKIL R
Sbjct: 83  CVSKILGR 90


>gi|148222721|ref|NP_001091013.1| paired box gene 6 [Canis lupus familiaris]
 gi|344281158|ref|XP_003412347.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Loxodonta
           africana]
 gi|426245242|ref|XP_004016422.1| PREDICTED: paired box protein Pax-6 isoform 5 [Ovis aries]
 gi|426245244|ref|XP_004016423.1| PREDICTED: paired box protein Pax-6 isoform 6 [Ovis aries]
 gi|426245246|ref|XP_004016424.1| PREDICTED: paired box protein Pax-6 isoform 7 [Ovis aries]
 gi|426245248|ref|XP_004016425.1| PREDICTED: paired box protein Pax-6 isoform 8 [Ovis aries]
 gi|134289886|gb|ABO70134.1| PAX6 [Canis lupus familiaris]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|57283153|emb|CAE30302.1| Pax6.2 protein [Glomeris marginata]
          Length = 228

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 26 RYYETGSIKPRAIGGSKPRVATPSVVNKIADYKRECPSIFAWEIRDRLLSDGVCTNDNIP 85

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 86 SVSSINRVL 94



 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 22/26 (84%)

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
           H+G RP DISR L+VS+GCVSKIL R
Sbjct: 1   HSGARPRDISRILQVSNGCVSKILGR 26


>gi|18138032|emb|CAC80518.1| paired box protein [Mus musculus]
          Length = 309

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|440910049|gb|ELR59881.1| Paired box protein Pax-6, partial [Bos grunniens mutus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 50/72 (69%), Gaps = 14/72 (19%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR-------------- 161
           S  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              
Sbjct: 2   SSGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQN 61

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 62  VSNGCVSKILGR 73


>gi|410929043|ref|XP_003977909.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Takifugu
           rubripes]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis aries]
          Length = 346

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 5  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 64

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 65 SVSSINRVL 73


>gi|45384210|ref|NP_990397.1| paired box protein Pax-6 [Gallus gallus]
 gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus gallus]
 gi|115501595|gb|ABI98845.1| paired box 6 [Columba livia]
 gi|115501597|gb|ABI98846.1| paired box 6 transcript variant 1 [Columba livia]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|281350934|gb|EFB26518.1| hypothetical protein PANDA_005849 [Ailuropoda melanoleuca]
          Length = 434

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 71  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 130

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 131 SVSSINRVL 139



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 49/69 (71%), Gaps = 14/69 (20%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VSH 164
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS+
Sbjct: 3   HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVSN 62

Query: 165 GCVSKILSR 173
           GCVSKIL R
Sbjct: 63  GCVSKILGR 71


>gi|121495689|emb|CAM12260.1| PAX-6 protein [Sepia officinalis]
          Length = 106

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EG+C+QDN+P
Sbjct: 4  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIRDRLLSEGVCTQDNIP 63

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 64 SVSSINRVL 72


>gi|288557282|ref|NP_001165666.1| paired box protein Pax-6 [Xenopus laevis]
 gi|8132379|gb|AAF73269.1|AF154553_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|348509484|ref|XP_003442278.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Oreochromis
           niloticus]
          Length = 437

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|149022827|gb|EDL79721.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
 gi|149022830|gb|EDL79724.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
          Length = 456

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 93  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 152

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 153 SVSSINRVL 161



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 38  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 93


>gi|6981334|ref|NP_037133.1| paired box protein Pax-6 [Rattus norvegicus]
 gi|51704214|sp|P63016.1|PAX6_RAT RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|1568653|gb|AAB09042.1| paired-box/homeobox protein [Rattus norvegicus]
 gi|118764376|gb|AAI28742.1| Paired box 6 [Rattus norvegicus]
          Length = 422

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|26389393|dbj|BAC25729.1| unnamed protein product [Mus musculus]
          Length = 422

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/56 (78%), Positives = 49/56 (87%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVN RPLPD  RQ+IV+LAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNERPLPDSTRQKIVQLAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|149022829|gb|EDL79723.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
 gi|149022831|gb|EDL79725.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
          Length = 470

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 107 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 166

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 167 SVSSINRVL 175



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 38  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSENVS 97

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 98  NGCVSKILGR 107


>gi|18138028|emb|CAC80516.1| paired box protein [Mus musculus]
          Length = 436

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|193786700|dbj|BAG52023.1| unnamed protein product [Homo sapiens]
          Length = 422

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|1663646|gb|AAC18658.1| Pax6 [Bos taurus]
          Length = 146

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|1352720|sp|P47238.1|PAX6_COTJA RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR
 gi|481053|pir||S37689 paired box transcription factor Pax-6 - quail
 gi|311772|emb|CAA49899.1| paired box and homeobox [Coturnix coturnix]
 gi|115501603|gb|ABI98849.1| paired box 6 transcript variant 4 [Columba livia]
          Length = 416

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|410929049|ref|XP_003977912.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Takifugu
           rubripes]
          Length = 456

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 98  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 157

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 158 SVSSINRVL 166



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 50/72 (69%), Gaps = 12/72 (16%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------R 161
           +    H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +
Sbjct: 27  ICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDAVQVLDSEK 86

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 87  VSNGCVSKILGR 98


>gi|332211111|ref|XP_003254659.1| PREDICTED: paired box protein Pax-6 [Nomascus leucogenys]
          Length = 458

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 95  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 154

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 155 SVSSINRVL 163



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 49/69 (71%), Gaps = 14/69 (20%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VSH 164
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS+
Sbjct: 27  HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVSN 86

Query: 165 GCVSKILSR 173
           GCVSKIL R
Sbjct: 87  GCVSKILGR 95


>gi|402893907|ref|XP_003910122.1| PREDICTED: paired box protein Pax-6 isoform 1 [Papio anubis]
 gi|402893909|ref|XP_003910123.1| PREDICTED: paired box protein Pax-6 isoform 2 [Papio anubis]
 gi|402893911|ref|XP_003910124.1| PREDICTED: paired box protein Pax-6 isoform 3 [Papio anubis]
 gi|402893917|ref|XP_003910127.1| PREDICTED: paired box protein Pax-6 isoform 6 [Papio anubis]
          Length = 422

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|3402201|emb|CAA16493.1| PAX6 [Takifugu rubripes]
          Length = 409

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 79  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 138

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 139 SVSSINRVL 147



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 50/72 (69%), Gaps = 12/72 (16%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------R 161
           +    H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +
Sbjct: 8   ICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDAVQVLDSEK 67

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 68  VSNGCVSKILGR 79


>gi|444301229|gb|AGD98725.1| paired box 6.1 [Callorhinchus milii]
          Length = 436

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL--------------RVS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L              +VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVVDNRKVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|55742272|ref|NP_001006763.1| paired box 6 [Xenopus (Silurana) tropicalis]
 gi|49522632|gb|AAH75551.1| paired box 6 [Xenopus (Silurana) tropicalis]
          Length = 424

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|189353|gb|AAA59962.1| oculorhombin [Homo sapiens]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|47218729|emb|CAG05701.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 417

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 5   HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|327259835|ref|XP_003214741.1| PREDICTED: paired box protein Pax-6-like isoform 7 [Anolis
           carolinensis]
          Length = 430

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|115501599|gb|ABI98847.1| paired box 6 transcript variant 2 [Columba livia]
          Length = 430

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform a variant [Homo sapiens]
          Length = 385

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 22 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 81

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 82 SVSSINRVL 90


>gi|383296|prf||1902328A PAX6 gene
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|4505615|ref|NP_000271.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|189083681|ref|NP_001121084.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|346644712|ref|NP_001231130.1| paired box protein Pax-6 isoform 2 [Mus musculus]
 gi|346644716|ref|NP_001231131.1| paired box protein Pax-6 isoform 2 [Mus musculus]
 gi|346644858|ref|NP_001231101.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
 gi|346644860|ref|NP_001231102.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
 gi|386642915|ref|NP_001245393.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|386642917|ref|NP_001245394.1| paired box protein Pax-6 isoform a [Homo sapiens]
 gi|388452718|ref|NP_001253186.1| paired box protein Pax-6 [Macaca mulatta]
 gi|354470763|ref|XP_003497614.1| PREDICTED: paired box protein Pax-6 isoform 1 [Cricetulus griseus]
 gi|390470358|ref|XP_003734275.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|390470360|ref|XP_002755189.2| PREDICTED: paired box protein Pax-6 isoform 2 [Callithrix jacchus]
 gi|390470362|ref|XP_003734276.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
 gi|395815485|ref|XP_003781257.1| PREDICTED: paired box protein Pax-6 [Otolemur garnettii]
 gi|397520709|ref|XP_003830454.1| PREDICTED: paired box protein Pax-6 isoform 1 [Pan paniscus]
 gi|397520711|ref|XP_003830455.1| PREDICTED: paired box protein Pax-6 isoform 2 [Pan paniscus]
 gi|397520713|ref|XP_003830456.1| PREDICTED: paired box protein Pax-6 isoform 3 [Pan paniscus]
 gi|403254502|ref|XP_003920004.1| PREDICTED: paired box protein Pax-6 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403254504|ref|XP_003920005.1| PREDICTED: paired box protein Pax-6 isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403254506|ref|XP_003920006.1| PREDICTED: paired box protein Pax-6 isoform 3 [Saimiri boliviensis
           boliviensis]
 gi|410973482|ref|XP_003993178.1| PREDICTED: paired box protein Pax-6 isoform 1 [Felis catus]
 gi|410973484|ref|XP_003993179.1| PREDICTED: paired box protein Pax-6 isoform 2 [Felis catus]
 gi|410973486|ref|XP_003993180.1| PREDICTED: paired box protein Pax-6 isoform 3 [Felis catus]
 gi|426367838|ref|XP_004050928.1| PREDICTED: paired box protein Pax-6 isoform 1 [Gorilla gorilla
           gorilla]
 gi|426367840|ref|XP_004050929.1| PREDICTED: paired box protein Pax-6 isoform 2 [Gorilla gorilla
           gorilla]
 gi|426367842|ref|XP_004050930.1| PREDICTED: paired box protein Pax-6 isoform 3 [Gorilla gorilla
           gorilla]
 gi|426367848|ref|XP_004050933.1| PREDICTED: paired box protein Pax-6 isoform 6 [Gorilla gorilla
           gorilla]
 gi|6174889|sp|P26367.2|PAX6_HUMAN RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type
           II protein; AltName: Full=Oculorhombin
 gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|189633|gb|AAA36416.1| paired-box protein [Homo sapiens]
 gi|1405745|emb|CAA45380.1| Pax-6 (paired box containing gene) [Mus musculus]
 gi|15080397|gb|AAH11953.1| Paired box 6 [Homo sapiens]
 gi|15422113|gb|AAK95849.1| paired box protein PAX6 [Homo sapiens]
 gi|22477504|gb|AAH36957.1| Pax6 protein [Mus musculus]
 gi|51872083|gb|AAU12168.1| paired box gene 6 isoform a [Homo sapiens]
 gi|90076866|dbj|BAE88113.1| unnamed protein product [Macaca fascicularis]
 gi|123981066|gb|ABM82362.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
 gi|123995873|gb|ABM85538.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
 gi|148695798|gb|EDL27745.1| paired box gene 6, isoform CRA_a [Mus musculus]
 gi|261860050|dbj|BAI46547.1| paired box 6 [synthetic construct]
 gi|380813234|gb|AFE78491.1| paired box protein Pax-6 isoform a [Macaca mulatta]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhogaster]
          Length = 452

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 21  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDSQNVS 80

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 81  NGCVSKILGR 90


>gi|348509488|ref|XP_003442280.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Oreochromis
           niloticus]
          Length = 457

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 98  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIP 157

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 158 SVSSINRVL 166



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 50/72 (69%), Gaps = 12/72 (16%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------R 161
           +    H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L            +
Sbjct: 27  ICDEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHDEVQVLDSEK 86

Query: 162 VSHGCVSKILSR 173
           VS+GCVSKIL R
Sbjct: 87  VSNGCVSKILGR 98


>gi|115501601|gb|ABI98848.1| paired box 6 transcript variant 3 [Columba livia]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|355566635|gb|EHH23014.1| hypothetical protein EGK_06384 [Macaca mulatta]
          Length = 361

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 14 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 73

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 74 SVSSINRVL 82


>gi|395543615|ref|XP_003773712.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
           [Sarcophilus harrisii]
          Length = 484

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 121 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 180

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 181 SVSSINRVL 189



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 52  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 111

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 112 NGCVSKILGR 121


>gi|151564048|gb|ABS17534.1| PAX6 [Pseudepidalea raddei]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|99028934|ref|NP_001035735.1| paired box protein Pax-6 [Bos taurus]
 gi|344281156|ref|XP_003412346.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Loxodonta
           africana]
 gi|426245234|ref|XP_004016418.1| PREDICTED: paired box protein Pax-6 isoform 1 [Ovis aries]
 gi|426245236|ref|XP_004016419.1| PREDICTED: paired box protein Pax-6 isoform 2 [Ovis aries]
 gi|426245238|ref|XP_004016420.1| PREDICTED: paired box protein Pax-6 isoform 3 [Ovis aries]
 gi|426245240|ref|XP_004016421.1| PREDICTED: paired box protein Pax-6 isoform 4 [Ovis aries]
 gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
 gi|94534889|gb|AAI16039.1| Paired box 6 [Bos taurus]
 gi|296479736|tpg|DAA21851.1| TPA: paired box protein Pax-6 [Bos taurus]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|77547035|gb|ABA90484.1| paired box protein PAX6 isoform a [Oryctolagus cuniculus]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|348557448|ref|XP_003464531.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Cavia
           porcellus]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|331271830|gb|AED02520.1| paired box 6 protein [Coturnix japonica]
          Length = 281

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 1  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 60

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 61 SVSSINRVL 69


>gi|344245472|gb|EGW01576.1| Paired box protein Pax-6 [Cricetulus griseus]
          Length = 544

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 155 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 214

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 215 SVSSINRVL 223



 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 2/79 (2%)

Query: 97  GVFVNGRPLPDVVRQRIVAS--RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPC 154
           G  V  +P  D  +  ++A     H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPC
Sbjct: 77  GQGVGEKPGADTEKLDLIAEVRTGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPC 136

Query: 155 DISRQLRVSHGCVSKILSR 173
           DISR L+VS+GCVSKIL R
Sbjct: 137 DISRILQVSNGCVSKILGR 155


>gi|325973715|emb|CBX88048.1| Pax6 transcription factor [Scyliorhinus canicula]
          Length = 497

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 134 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 193

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 194 SVSSINRVL 202



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 14/74 (18%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQL------------- 160
           V+S  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L             
Sbjct: 61  VSSPGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVVDN 120

Query: 161 -RVSHGCVSKILSR 173
            +VS+GCVSKIL R
Sbjct: 121 RKVSNGCVSKILGR 134


>gi|269931719|gb|ACZ54379.1| paired box 6 [Monodelphis domestica]
          Length = 282

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 63  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 122

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 123 SVSSINRVL 131



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/63 (63%), Positives = 44/63 (69%), Gaps = 14/63 (22%)

Query: 125 LGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VSHGCVSKI 170
           LGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS+GCVSKI
Sbjct: 1   LGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVSNGCVSKI 60

Query: 171 LSR 173
           L R
Sbjct: 61  LGR 63


>gi|148695801|gb|EDL27748.1| paired box gene 6, isoform CRA_d [Mus musculus]
          Length = 499

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 136 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 195

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 196 SVSSINRVL 204



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 67  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 126

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 127 NGCVSKILGR 136


>gi|119588642|gb|EAW68236.1| paired box gene 6 (aniridia, keratitis), isoform CRA_c [Homo
           sapiens]
          Length = 470

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 107 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 166

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 167 SVSSINRVL 175



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 51/76 (67%), Gaps = 14/76 (18%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR---------- 161
           R     SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+          
Sbjct: 32  RASMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVL 91

Query: 162 ----VSHGCVSKILSR 173
               VS+GCVSKIL R
Sbjct: 92  DNQNVSNGCVSKILGR 107


>gi|5758937|gb|AAD50902.1|AF169413_1 paired-box transcription factor +- isoform, partial [Ambystoma
           mexicanum]
          Length = 404

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 71  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 130

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 131 SVSSINRVL 139



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 2   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTQADAKVQVLDNQNVS 61

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 62  NGCVSKILGR 71


>gi|327259823|ref|XP_003214735.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Anolis
           carolinensis]
          Length = 422

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|325516451|gb|ADZ24784.1| Pax6 [Terebratalia transversa]
          Length = 433

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 5/98 (5%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL E +CSQ+N+P
Sbjct: 65  RYYETGSIRPRAIGGSKPRVATPEVVQKIAHYKRECPSIFAWEIRDRLLQETVCSQENIP 124

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVF-----VNGRPLP 106
           SVSSINR +  +   +      G ++     +NG+P P
Sbjct: 125 SVSSINRVLRNLTTDNQKGMHPGAMYDKLGLLNGQPWP 162



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 51/61 (83%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +   + H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL 
Sbjct: 5   LAGHKGHSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILG 64

Query: 173 R 173
           R
Sbjct: 65  R 65


>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
           sapiens]
 gi|119588640|gb|EAW68234.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
           sapiens]
          Length = 456

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 93  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 152

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 153 SVSSINRVL 161



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 51/62 (82%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           R     SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL
Sbjct: 32  RASMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKIL 91

Query: 172 SR 173
            R
Sbjct: 92  GR 93


>gi|5758935|gb|AAD50901.1|AF169412_1 paired-box transcription factor ++ isoform, partial [Ambystoma
           mexicanum]
          Length = 433

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 71  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 130

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 131 SVSSINRVL 139



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 2   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTQADAKVQVLDNQNVS 61

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 62  NGCVSKILGR 71


>gi|269200156|gb|ACZ28705.1| paired box protein 6 isoform c [Homo sapiens]
          Length = 401

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|5758939|gb|AAD50903.1|AF169414_1 paired-box transcription factor -+ isoform, partial [Ambystoma
           mexicanum]
          Length = 419

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 57  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 116

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 117 SVSSINRVL 125



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 2   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 57


>gi|347963096|ref|XP_311087.5| AGAP000067-PA [Anopheles gambiae str. PEST]
 gi|333467362|gb|EAA06761.5| AGAP000067-PA [Anopheles gambiae str. PEST]
          Length = 313

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VATA VV  IA YK E P++FAWEIRDRLL+EG C+ DN+P
Sbjct: 75  RYYETGSIKPRAIGGSKPRVATAAVVSKIAEYKAECPSIFAWEIRDRLLSEGTCNNDNIP 134

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 135 SVSSINRVL 143



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/58 (75%), Positives = 50/58 (86%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 18  SSGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 75


>gi|189313477|gb|ACD88755.1| Pax6 isoform 2 [Limulus polyphemus]
          Length = 456

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|259013350|ref|NP_001158383.1| paired box 6 [Saccoglossus kowalevskii]
 gi|32307795|gb|AAP79294.1| pax6 [Saccoglossus kowalevskii]
          Length = 457

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT PVV  IA +KRE P++FAWEIRDRLL E +C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPRVATPPVVGKIAQFKRECPSIFAWEIRDRLLQEQVCTQDNIP 125

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 126 SVSSINRVL 134



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
          Length = 1055

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 543 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 602

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 603 SVSSINRVL 611



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 474 SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 533

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 534 NGCVSKILGR 543


>gi|189313475|gb|ACD88754.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 456

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   KGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|410045098|ref|XP_003954413.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pan
           troglodytes]
          Length = 430

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 67  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRVL 135


>gi|5758941|gb|AAD50904.1|AF169415_1 paired-box transcription factor -- isoform, partial [Ambystoma
           mexicanum]
          Length = 390

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 57  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 116

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 117 SVSSINRVL 125



 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 2   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 57


>gi|18138024|emb|CAC80514.1| paired box protein [Mus musculus]
          Length = 292

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|431915679|gb|ELK16012.1| Paired box protein Pax-6 [Pteropus alecto]
          Length = 441

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 156 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 215

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 216 SVSSINRVL 224



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 50/58 (86%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 99  SLGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 156


>gi|395742931|ref|XP_003777840.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pongo
           abelii]
          Length = 421

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 89.0 bits (219), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|109288051|gb|ABG29069.1| transcription factor Pax6 [Pleurodeles waltl]
          Length = 214

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 5  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 64

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 65 SVSSINRVL 73


>gi|189313487|gb|ACD88760.1| Pax6 isoform 2 [Limulus polyphemus]
          Length = 178

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|83318915|emb|CAJ40659.1| Pax6 protein [Platynereis dumerilii]
          Length = 449

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ +A YKRE P++FAWEIRDRLL+EG+C+QD++P
Sbjct: 96  RYYETGSIRPRAIGGSKPRVATPEVVNKVAQYKRECPSIFAWEIRDRLLSEGVCNQDDIP 155

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 156 SVSSINRVL 164



 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 40  RGHSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 96


>gi|1527205|gb|AAB07733.1| XLPAX6 [Xenopus laevis]
          Length = 407

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 132

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 133 SVSSINRVL 141



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQSHADAKVPVLDSQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|18859209|ref|NP_571379.1| paired box protein Pax-6 [Danio rerio]
 gi|62547|emb|CAA44867.1| pax-6 [Danio rerio]
          Length = 451

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 92  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRVL 160



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 82

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 83  NGCVSKILGR 92


>gi|49902846|gb|AAH76068.1| Pax6b protein [Danio rerio]
          Length = 384

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|18859211|ref|NP_571716.1| paired box gene 6b [Danio rerio]
 gi|3779238|gb|AAC96095.1| Pax-family transcription factor 6.2 [Danio rerio]
          Length = 437

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|47206453|emb|CAF89478.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 433

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YK+E P++FAWEIRDRLLAEG+C+ DN+P
Sbjct: 56  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKKECPSIFAWEIRDRLLAEGVCTNDNIP 115

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 116 SVSSINRVL 124



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +H GVNQ GGV VNGR LPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   AHSGVNQRGGVCVNGRSLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 56


>gi|256087587|ref|XP_002579948.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 712

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/80 (63%), Positives = 61/80 (76%), Gaps = 2/80 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL EG
Sbjct: 57  VSKILC--RYYETGSIRPKAIGGSKPRVATNLVVLKIAHYKRECPSIFAWEIRDRLLQEG 114

Query: 66  ICSQDNVPSVSSINRYITYV 85
           IC+ +N+PSVSSINR +  V
Sbjct: 115 ICTTENIPSVSSINRVLRNV 134



 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ H GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   NKRHSGVNQLGGMFVNGRPLPDTTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 63


>gi|189313481|gb|ACD88757.1| Pax6 isoform 1 [Limulus polyphemus]
 gi|189313485|gb|ACD88759.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 174

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   KGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|189313479|gb|ACD88756.1| Pax6 isoform 1 [Limulus polyphemus]
          Length = 183

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 59/69 (85%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ IA YKRE P++FAWEIRDRLLA+G+C+ +N+P
Sbjct: 60  RYYETGSIKPRTIGGSKPRVATSAVVNKIADYKRECPSVFAWEIRDRLLADGVCNSENIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRVL 128



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   KGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 60


>gi|129651|sp|P26630.1|PAX6_DANRE RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a]
 gi|62549|emb|CAA43661.1| Pax[zf-a] [Danio rerio]
 gi|44890538|gb|AAH66722.1| Pax6a protein [Danio rerio]
          Length = 437

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|345305654|ref|XP_003428362.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6-like
           [Ornithorhynchus anatinus]
          Length = 704

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 56/67 (83%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 326 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 385

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 386 SVSSINR 392


>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
          Length = 384

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 4/83 (4%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAE IC+Q+N+P
Sbjct: 45  RYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQENIP 104

Query: 74  SVSSINRYITYVP----IGHGGV 92
           SVSSINR +  +     +GHG +
Sbjct: 105 SVSSINRVLRNLAAEKTMGHGDM 127



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 40/45 (88%)

Query: 129 FVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           FVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   FVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 45


>gi|228153|prf||1717390A pax gene
          Length = 374

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 15 RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 74

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 75 SVSSINRVL 83


>gi|440647289|dbj|BAM74251.1| Pax-6 variant form1 [Idiosepius paradoxus]
          Length = 408

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWE+RDRLL+EG+C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEVRDRLLSEGVCTQDNIP 125

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 126 SVSSINRVL 134



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|8132383|gb|AAF73271.1|AF154555_1 paired domain transcription factor variant A [Xenopus laevis]
 gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis]
          Length = 422

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|148222787|ref|NP_001079413.1| paired box 6 [Xenopus laevis]
 gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis]
          Length = 453

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 90  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 149

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 150 SVSSINRVL 158



 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 35  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 90


>gi|8132387|gb|AAF73273.1|AF154557_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|8132377|gb|AAF73268.1|AF154552_1 paired domain transcription factor variant B [Xenopus laevis]
          Length = 393

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|444732073|gb|ELW72394.1| Paired box protein Pax-6 [Tupaia chinensis]
          Length = 601

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|170040740|ref|XP_001848147.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167864330|gb|EDS27713.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 318

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 58/69 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV+ I+ YK E P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 75  RYYETGSIKPRAIGGSKPRVATSSVVNKISEYKAECPSIFAWEIRDRLLSEGVCNNDNIP 134

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 135 SVSSINRVL 143



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 21  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 75


>gi|299906603|gb|ADJ58016.1| PaxB [Chalinula loosanoffi]
          Length = 589

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 52/58 (89%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S   GGVNQLGG+FVNGRPLPD +R+RIVELA NG+RPCDISRQLRVSHGCVSKIL R
Sbjct: 5   SSEQGGVNQLGGLFVNGRPLPDPIRRRIVELAQNGIRPCDISRQLRVSHGCVSKILGR 62



 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS K G+IGGSKPKVAT  VV  I  +KR+NP++FAWEIRDRLL E IC++ NVP
Sbjct: 62  RFYETGSVKPGIIGGSKPKVATPKVVIKIEEFKRDNPSIFAWEIRDRLLTEKICNKANVP 121

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 122 SVSSINRIV 130


>gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax mexicanus]
          Length = 433

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 74  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTNDNIP 133

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 134 SVSSINRVL 142



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 5   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTQADAKVQVLDNENVS 64

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 65  NGCVSKILGR 74


>gi|326680199|ref|XP_003201477.1| PREDICTED: paired box protein Pax-6-like [Danio rerio]
          Length = 275

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 92  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRVL 160



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNENVS 82

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 83  NGCVSKILGR 92


>gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax mexicanus]
          Length = 441

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 82  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTNDNIP 141

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 142 SVSSINRVL 150



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 51/74 (68%), Gaps = 14/74 (18%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR------------ 161
           + +  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+            
Sbjct: 9   ICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTQADAKVQVLDN 68

Query: 162 --VSHGCVSKILSR 173
             VS+GCVSKIL R
Sbjct: 69  ENVSNGCVSKILGR 82


>gi|353232111|emb|CCD79466.1| putative paired box protein pax-6 [Schistosoma mansoni]
          Length = 1258

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/77 (63%), Positives = 59/77 (76%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  I  YKRE P++FAWEIRDRLL EG
Sbjct: 71  VSKILC--RYYETGSIRPKAIGGSKPRVATNAVVTKIDIYKRECPSIFAWEIRDRLLQEG 128

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+ DN+PSVSSINR +
Sbjct: 129 VCTPDNIPSVSSINRVL 145



 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/57 (78%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R H GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 21  RGHSGVNQLGGMFVNGRPLPDTTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 77


>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
          Length = 442

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 4/83 (4%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAE IC+Q+N+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQENIP 132

Query: 74  SVSSINRYI----TYVPIGHGGV 92
           SVSSINR +    +   +GHG +
Sbjct: 133 SVSSINRVLRNLASEKTMGHGDM 155



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 17  KGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 73


>gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax mexicanus]
          Length = 459

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 100 RYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTNDNIP 159

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 160 SVSSINRVL 168



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 51/74 (68%), Gaps = 14/74 (18%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR------------ 161
           + +  H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+            
Sbjct: 27  ICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTQADAKVQVLDN 86

Query: 162 --VSHGCVSKILSR 173
             VS+GCVSKIL R
Sbjct: 87  ENVSNGCVSKILGR 100


>gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax mexicanus]
 gi|2369657|emb|CAA68839.1| PAX-6 protein [Astyanax mexicanus]
 gi|50082925|gb|AAT70088.1| Pax6 homeobox protein [Astyanax mexicanus]
          Length = 437

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQFKRECPSIFAWEIRDRLLSEGICTNDNIP 137

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 138 SVSSINRVL 146



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 23  SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 78


>gi|440647291|dbj|BAM74252.1| Pax-6 variant form2 [Idiosepius paradoxus]
          Length = 448

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP VAT  VV  IA +KRE P++FAWE+RDRLL+EG+C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPXVATPEVVQKIAQFKRECPSIFAWEVRDRLLSEGVCTQDNIP 125

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 126 SVSSINRVL 134



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|196010814|ref|XP_002115271.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
 gi|190582042|gb|EDV22116.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
          Length = 400

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYY+TGS   G+IGGSKPKVAT  VVD IA YKR N T+FAWEIR++LL + 
Sbjct: 64  VSKILC--RYYQTGSVSPGIIGGSKPKVATPTVVDKIAEYKRNNSTIFAWEIREKLLGDK 121

Query: 66  ICSQDNVPSVSSINRYI 82
           IC   NVPSVSSINR +
Sbjct: 122 ICDASNVPSVSSINRIV 138



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H  +NQLGGVF NGRPL + +R+ IV+LA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 16  HVTINQLGGVFENGRPLREAIRRHIVQLAQSGVRPCDISRQLRVSHGCVSKILCR 70


>gi|194768292|ref|XP_001966246.1| GF22818 [Drosophila ananassae]
 gi|190618548|gb|EDV34072.1| GF22818 [Drosophila ananassae]
          Length = 900

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 155 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 214

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 215 SVSSINRVL 223



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 101 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 155


>gi|321464778|gb|EFX75784.1| twin of eyeless [Daphnia pulex]
          Length = 473

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV  IA YKRE P++FAWEIRDRLL+EG+C+ D +P
Sbjct: 75  RYYETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNNDTIP 134

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 135 SVSSINRVL 143



 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 21  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 75


>gi|207113487|gb|ACI23462.1| Pax6 variant [Pseudepidalea raddei]
          Length = 393

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  I  YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIVQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|1296836|emb|CAA64847.1| Pax6-like protein [Lineus sanguineus]
          Length = 370

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL++ +C+QDN+P
Sbjct: 102 RYYETGSIRPRAIGGSKPRVATPEVVGKIAHYKRECPSIFAWEIRDRLLSDAVCNQDNIP 161

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 162 SVSSINRVL 170



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/58 (79%), Positives = 50/58 (86%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCV+KIL R
Sbjct: 45  SAGHSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVTKILGR 102


>gi|15080680|dbj|BAB62531.1| paired box transcription factor Pax6 [Lethenteron camtschaticum]
          Length = 448

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 5/84 (5%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG C+ DN+P
Sbjct: 88  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGACTSDNIP 147

Query: 74  SVSSINRYITYV-----PIGHGGV 92
           SVSSINR +  +     P+G  GV
Sbjct: 148 SVSSINRVLRNLASEKQPMGAEGV 171



 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 34  HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 88


>gi|57283151|emb|CAE30301.1| Pax6.1 protein [Glomeris marginata]
          Length = 235

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL++G+C+ DN+P
Sbjct: 26 RYYETGSIRPRAIGGSKPRVATQEVVGKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIP 85

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 86 SVSSINRVL 94



 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/26 (76%), Positives = 23/26 (88%)

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
           H+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   HSGARPCDISRILQVSNGCVSKILGR 26


>gi|17541240|ref|NP_500513.1| Protein PAX-2 [Caenorhabditis elegans]
 gi|351062303|emb|CCD70278.1| Protein PAX-2 [Caenorhabditis elegans]
          Length = 351

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYY TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC ++NVP
Sbjct: 146 RYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLIEDQICGEENVP 205

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 206 SVSSINRIV 214



 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 53/61 (86%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +++  SH GVNQLGGVFVNGRPLPD +R +IVE++ +G RPCDISRQL+VSHGCVSKIL 
Sbjct: 86  LLSDGSHTGVNQLGGVFVNGRPLPDTIRAQIVEMSQHGTRPCDISRQLKVSHGCVSKILG 145

Query: 173 R 173
           R
Sbjct: 146 R 146


>gi|67527267|gb|AAY68376.1| PaxB, partial [Trichoplax adhaerens]
          Length = 318

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYY+TGS   G+IGGSKPKVAT  VVD IA YKR N T+FAWEIR++LL + 
Sbjct: 54  VSKILC--RYYQTGSVSPGIIGGSKPKVATPTVVDKIAEYKRNNSTIFAWEIREKLLGDK 111

Query: 66  ICSQDNVPSVSSINRYI 82
           IC   NVPSVSSINR +
Sbjct: 112 ICDASNVPSVSSINRIV 128



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H  +NQLGGVF NGRPL + +R+ IV+LA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 6   HVTINQLGGVFENGRPLREAIRRHIVQLAQSGVRPCDISRQLRVSHGCVSKILCR 60


>gi|390355345|ref|XP_785245.3| PREDICTED: uncharacterized protein LOC580076 [Strongylocentrotus
           purpuratus]
          Length = 467

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 15/139 (10%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS   G IGGSKPKVAT  VV  I SYKR+NP++FAWEIRDRLL E +C ++ +P
Sbjct: 60  RYYETGSIAPGNIGGSKPKVATPLVVKKIMSYKRKNPSIFAWEIRDRLLRERVCDKNTIP 119

Query: 74  SVSSINRYI---TYVPIGHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLG-GVF 129
           S+SSINR I   TY     G  + L        P+P     R+ A  +HG +     G+ 
Sbjct: 120 SISSINRIIRNGTYFTHDEGNPSSLPA------PIP-----RVAAGLAHGNMPHPSQGII 168

Query: 130 VNGRPLPDVVRQRIVELAH 148
                +   +  R++ELA+
Sbjct: 169 SPDTTMAPYLSNRLMELAN 187



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLP  VR RIVELA  GVRPCDISRQL VSHGCVSKILSR
Sbjct: 6   QAGVNQLGGVFVNGRPLPVCVRARIVELAQLGVRPCDISRQLLVSHGCVSKILSR 60


>gi|17539616|ref|NP_501836.1| Protein EGL-38 [Caenorhabditis elegans]
 gi|2190982|gb|AAC27976.1| PAX protein [Caenorhabditis elegans]
 gi|3873898|emb|CAA94671.1| Protein EGL-38 [Caenorhabditis elegans]
          Length = 289

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYY TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC ++NVP
Sbjct: 84  RYYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLIEDQICGEENVP 143

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 144 SVSSINRIV 152



 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 52/61 (85%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +++  SH GVNQLGGVFVNGRPL D VR +IVE++ +G RPCDISRQL+VSHGCVSKIL 
Sbjct: 24  LLSDGSHTGVNQLGGVFVNGRPLADTVRAQIVEMSQHGTRPCDISRQLKVSHGCVSKILG 83

Query: 173 R 173
           R
Sbjct: 84  R 84


>gi|195469385|ref|XP_002099618.1| GE14559 [Drosophila yakuba]
 gi|194185719|gb|EDW99330.1| GE14559 [Drosophila yakuba]
          Length = 898

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 152 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 211

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 212 SVSSINRVL 220



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 98  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 152


>gi|194913493|ref|XP_001982710.1| GG16399 [Drosophila erecta]
 gi|190647926|gb|EDV45229.1| GG16399 [Drosophila erecta]
          Length = 900

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 152 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 211

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 212 SVSSINRVL 220



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 98  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 152


>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
          Length = 909

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 154 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQESVCTNDNIP 213

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 214 SVSSINRVL 222



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 100 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 154


>gi|195133952|ref|XP_002011402.1| GI14081 [Drosophila mojavensis]
 gi|193912025|gb|EDW10892.1| GI14081 [Drosophila mojavensis]
          Length = 891

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 153 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 212

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 213 SVSSINRVL 221



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 99  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 153


>gi|195172576|ref|XP_002027073.1| ey [Drosophila persimilis]
 gi|194112851|gb|EDW34894.1| ey [Drosophila persimilis]
          Length = 896

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 149 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 208

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 209 SVSSINRVL 217



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 95  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 149


>gi|195402299|ref|XP_002059744.1| eyeless [Drosophila virilis]
 gi|194155958|gb|EDW71142.1| eyeless [Drosophila virilis]
          Length = 906

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 154 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQESVCTNDNIP 213

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 214 SVSSINRVL 222



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 100 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 154


>gi|63028387|gb|AAY27075.1| Pax6 [Oikopleura dioica]
          Length = 412

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRL+ E +C+ DN+P
Sbjct: 87  RYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNSDNIP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRVL 155



 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG FVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL+R
Sbjct: 33  HSGVNQLGGAFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILAR 87


>gi|198462210|ref|XP_001352371.2| ey [Drosophila pseudoobscura pseudoobscura]
 gi|198139686|gb|EAL29360.2| ey [Drosophila pseudoobscura pseudoobscura]
          Length = 896

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 149 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 208

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 209 SVSSINRVL 217



 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 95  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 149


>gi|195354419|ref|XP_002043695.1| ey [Drosophila sechellia]
 gi|194128883|gb|EDW50926.1| ey [Drosophila sechellia]
          Length = 899

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 152 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 211

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 212 SVSSINRVL 220



 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 98  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 152


>gi|62473159|ref|NP_001014693.1| eyeless, isoform D [Drosophila melanogaster]
 gi|61677928|gb|AAX52512.1| eyeless, isoform D [Drosophila melanogaster]
          Length = 898

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 152 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 211

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 212 SVSSINRVL 220



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 98  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 152


>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
          Length = 436

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL E +CSQD +P
Sbjct: 65  RYYETGSIRPRAIGGSKPRVATMSVVNKIAIYKRECPSIFAWEIRDRLLNENVCSQDTIP 124

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 125 SVSSINRVL 133



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 9   KGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 65


>gi|12643549|sp|O18381.3|PAX6_DROME RecName: Full=Paired box protein Pax-6; AltName: Full=Protein
           eyeless
          Length = 857

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 111 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 170

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 171 SVSSINRVL 179



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 57  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 111


>gi|62473168|ref|NP_001014694.1| eyeless, isoform C [Drosophila melanogaster]
 gi|61677929|gb|AAX52513.1| eyeless, isoform C [Drosophila melanogaster]
          Length = 857

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 111 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 170

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 171 SVSSINRVL 179



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 57  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 111


>gi|348514452|ref|XP_003444754.1| PREDICTED: paired box protein Pax-5-like [Oreochromis niloticus]
          Length = 176

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 56/67 (83%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRE 174
           A   HGGVNQLGGVF+NGRPLP VVRQRIVELA  GVRPC+ISR+LRVSHGCVSKIL+R 
Sbjct: 5   AMHRHGGVNQLGGVFINGRPLPHVVRQRIVELAQQGVRPCEISRRLRVSHGCVSKILARY 64

Query: 175 SNLHNYR 181
           +   + R
Sbjct: 65  NETGSIR 71



 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + G+IGGSKPKVAT  VV  I   K  NPTMFAWEIRDRLL E +C Q++VP
Sbjct: 63  RYNETGSIRPGLIGGSKPKVATPRVVQKILQLKHHNPTMFAWEIRDRLLLEQVCDQNSVP 122

Query: 74  SVSSINRYI 82
           S+SSINR I
Sbjct: 123 SISSINRII 131


>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
          Length = 439

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 60/81 (74%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+P
Sbjct: 58  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIP 117

Query: 74  SVSSINRYITYVPIGHGGVNQ 94
           SVSSINR +  +  G     Q
Sbjct: 118 SVSSINRVLRNLASGEKNTLQ 138



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   HSGVNQLGGVFVNGRPLPDSTRQKIVELAHQGARPCDISRLLQVSNGCVSKILGR 58


>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
          Length = 461

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 60/81 (74%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIP 118

Query: 74  SVSSINRYITYVPIGHGGVNQ 94
           SVSSINR +  +  G     Q
Sbjct: 119 SVSSINRVLRNLASGEKNTLQ 139



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 49/57 (85%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R H GVNQLGGVFVNGRPLPD  RQ+IVELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 3   RGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHQGARPCDISRLLQVSNGCVSKILGR 59


>gi|195450767|ref|XP_002072624.1| GK13702 [Drosophila willistoni]
 gi|194168709|gb|EDW83610.1| GK13702 [Drosophila willistoni]
          Length = 951

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 154 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 213

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 214 SVSSINRVL 222



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 100 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 154


>gi|641810|emb|CAA56038.1| transcription factor [Drosophila melanogaster]
          Length = 838

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 92  RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRVL 160



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A + H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 33  MAHKGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 92


>gi|24638702|ref|NP_524628.2| eyeless, isoform A [Drosophila melanogaster]
 gi|7304285|gb|AAF59318.1| eyeless, isoform A [Drosophila melanogaster]
          Length = 838

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 92  RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 151

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 152 SVSSINRVL 160



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A + H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 33  MAHKGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 92


>gi|440647293|dbj|BAM74253.1| Pax-6 variant form3 [Idiosepius paradoxus]
          Length = 499

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 10/101 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEI DRLL+EG+C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIGDRLLSEGVCTQDNIP 125

Query: 74  SVSSINRYITYVP------IGHGGV--NQLGGVFVNGRPLP 106
           SVSSINR +  +       +G G    ++LG   +NG+  P
Sbjct: 126 SVSSINRVLRNLAGENQKVLGQGTTMYDKLG--LLNGQAWP 164



 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
          Length = 462

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 60/81 (74%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+P
Sbjct: 81  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIP 140

Query: 74  SVSSINRYITYVPIGHGGVNQ 94
           SVSSINR +  +  G     Q
Sbjct: 141 SVSSINRVLRNLASGEKNTLQ 161



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 49/61 (80%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           + A   H GVNQLGGVFV GRPLPD  RQ+IVELAH G RPCDISR L+VS+GCVSKIL 
Sbjct: 21  VQADPGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHQGARPCDISRLLQVSNGCVSKILG 80

Query: 173 R 173
           R
Sbjct: 81  R 81


>gi|242009926|ref|XP_002425733.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
 gi|212509634|gb|EEB12995.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
          Length = 229

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  I+ +KRE P++FAWEIRDRLL EGIC+ DN+P
Sbjct: 64  RYYETGSIRPRAIGGSKPRVATTEVVSKISQFKRECPSIFAWEIRDRLLQEGICTNDNIP 123

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 124 SVSSINRVL 132



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 10  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 64


>gi|56714093|gb|AAW24017.1| homeodomain protein Pax6 [Oikopleura dioica]
          Length = 414

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRL+ E +C+ DN+P
Sbjct: 89  RYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTDNIP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRVL 157



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%), Gaps = 2/57 (3%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVR--QRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG FVNGRPLPD +R  Q+IVELAH+G RPCDISR L+VS+GCVSKIL+R
Sbjct: 33  HSGVNQLGGAFVNGRPLPDSLRTRQKIVELAHSGARPCDISRILQVSNGCVSKILAR 89


>gi|126702026|gb|ABN09915.2| paired box 6A transcription factor [Helobdella sp. MS-2000]
          Length = 933

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYE+GS +   IGGSKP+VAT  VV  IA YK+E P++FAWEIRDRLL+E ICSQ+N+P
Sbjct: 61  RYYESGSIRPRTIGGSKPRVATMSVVQRIAHYKKECPSIFAWEIRDRLLSEEICSQENIP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRVL 129



 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/57 (80%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R H GVNQLGG+FVNGRPLPD  RQ+IVELAHNG RPCDISR L+VS+GCVSKIL R
Sbjct: 5   RGHSGVNQLGGMFVNGRPLPDTTRQKIVELAHNGARPCDISRILQVSNGCVSKILGR 61


>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
          Length = 463

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 60/81 (74%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+P
Sbjct: 58  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIP 117

Query: 74  SVSSINRYITYVPIGHGGVNQ 94
           SVSSINR +  +  G     Q
Sbjct: 118 SVSSINRVLRNLASGEKNTLQ 138



 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV+GRPLPD  RQ+IVELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   HSGVNQLGGVFVDGRPLPDSTRQKIVELAHQGARPCDISRLLQVSNGCVSKILGR 58


>gi|313233507|emb|CBY09679.1| unnamed protein product [Oikopleura dioica]
          Length = 410

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRL+ E +C+ DN+P
Sbjct: 89  RYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTDNIP 148

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 149 SVSSINRVL 157



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%), Gaps = 2/57 (3%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVR--QRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG FVNGRPLPD +R  Q+IVELAH+G RPCDISR L+VS+GCVSKIL+R
Sbjct: 33  HSGVNQLGGAFVNGRPLPDSLRTRQKIVELAHSGARPCDISRILQVSNGCVSKILAR 89


>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
          Length = 483

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 60/81 (74%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+P
Sbjct: 81  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIP 140

Query: 74  SVSSINRYITYVPIGHGGVNQ 94
           SVSSINR +  +  G     Q
Sbjct: 141 SVSSINRVLRNLASGEKNTLQ 161



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 49/61 (80%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           + A   H GVNQLGGVFV GRPLPD  R++IVELAH G RPCDISR L+VS+GCVSKIL 
Sbjct: 21  VQADPGHSGVNQLGGVFVGGRPLPDSTRRKIVELAHQGARPCDISRLLQVSNGCVSKILG 80

Query: 173 R 173
           R
Sbjct: 81  R 81


>gi|218505945|gb|ABG02193.2| IP14880p [Drosophila melanogaster]
          Length = 357

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+P
Sbjct: 135 RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIP 194

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 195 SVSSINRVL 203



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 81  HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 135


>gi|388441|gb|AAB27470.1| paired box Pax-6 gene product [chickens, White Leghorn, embryo,
           Peptide Partial, 128 aa, segment 1 of 2]
          Length = 128

 Score =  102 bits (254), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA  KRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 56  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQTKRECPSIFAWEIRDRLLSEGVCTNDNIP 115

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 116 SVSSINRVL 124



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/56 (78%), Positives = 49/56 (87%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLP+  RQ+IVELAH+G RPC+ISR L VS+GCVSKIL R
Sbjct: 1   SHSGVNQLGGVFVNGRPLPNSTRQKIVELAHSGARPCNISRILNVSNGCVSKILGR 56


>gi|313241707|emb|CBY33928.1| unnamed protein product [Oikopleura dioica]
          Length = 433

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRL+ E +C+ DN+P
Sbjct: 105 RYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTDNIP 164

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 165 SVSSINRVL 173



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%)

Query: 91  GVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVR--QRIVELAH 148
           G ++LGG  +  R +      +I     H GVNQLGG FVNGRPLPD +R  Q+IVELAH
Sbjct: 21  GHSRLGGGTLRSRLINTGFHFKISNDLGHSGVNQLGGAFVNGRPLPDSLRTRQKIVELAH 80

Query: 149 NGVRPCDISRQLRVSHGCVSKILSR 173
           +G RPCDISR L+VS+GCVSKIL+R
Sbjct: 81  SGARPCDISRILQVSNGCVSKILAR 105


>gi|313240077|emb|CBY32432.1| unnamed protein product [Oikopleura dioica]
          Length = 433

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRL+ E +C+ DN+P
Sbjct: 105 RYYETGSIKPRAIGGSKPRVATPEVVNKIADYKRECPSIFAWEIRDRLITENVCNTDNIP 164

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 165 SVSSINRVL 173



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 61/85 (71%), Gaps = 2/85 (2%)

Query: 91  GVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVR--QRIVELAH 148
           G ++LGG  +  R +      +I     H GVNQLGG FVNGRPLPD +R  Q+IVELAH
Sbjct: 21  GHSRLGGGTLRSRLINTGFHFKISNDLGHSGVNQLGGAFVNGRPLPDSLRTRQKIVELAH 80

Query: 149 NGVRPCDISRQLRVSHGCVSKILSR 173
           +G RPCDISR L+VS+GCVSKIL+R
Sbjct: 81  SGARPCDISRILQVSNGCVSKILAR 105


>gi|358337852|dbj|GAA56186.1| paired box protein Pax-6 [Clonorchis sinensis]
          Length = 580

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 59/77 (76%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  I  YKRE P++FAWEIRDRLL EG
Sbjct: 147 VSKILC--RYYETGSIRPKAIGGSKPRVATGSVVAKIDLYKRECPSIFAWEIRDRLLQEG 204

Query: 66  ICSQDNVPSVSSINRYI 82
           IC+ DN+PSVSSINR +
Sbjct: 205 ICTPDNIPSVSSINRVL 221



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 98  SHSGVNQLGGMFVNGRPLPDSTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 153


>gi|269784953|ref|NP_001161628.1| eyegone [Saccoglossus kowalevskii]
 gi|268054261|gb|ACY92617.1| PaxB transcription factor [Saccoglossus kowalevskii]
 gi|283464079|gb|ADB22623.1| Pax6-like protein [Saccoglossus kowalevskii]
          Length = 385

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYE G+ + G IGGSKPKVAT  VV  I  YK+ENPT+FAWEIRDRL++EG+C+   VP
Sbjct: 65  RYYEMGAIRPGTIGGSKPKVATPEVVSKIELYKQENPTIFAWEIRDRLISEGVCTNSTVP 124

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 125 SVSSINRIL 133



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 48/57 (84%), Gaps = 3/57 (5%)

Query: 119 HGGVN---QLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           H G+N   QLGG+F+NGRPLPD +R RIVELAH G+RPCDISRQL +SHG VSK+L+
Sbjct: 7   HPGLNGLPQLGGMFLNGRPLPDPLRHRIVELAHCGIRPCDISRQLLISHGSVSKMLA 63


>gi|325973713|emb|CBX88047.1| Pax6 transcription factor [Eptatretus burgeri]
          Length = 403

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLLAEG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLAEGVCANDNIP 118

Query: 74  SVSSINRYI 82
           SVS INR +
Sbjct: 119 SVSWINRVL 127



 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD +RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDTIRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|383862169|ref|XP_003706556.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
          Length = 552

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV+ I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 68  RYYETGSIRPRAIGGSKPRVATAEVVNKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 127

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 128 SVSSINRVL 136



 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 50/59 (84%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A R H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 10  AMRGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 68


>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
          Length = 481

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/66 (69%), Positives = 55/66 (83%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG C+QDN+P
Sbjct: 88  RYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGCCNQDNIP 147

Query: 74  SVSSIN 79
           S+SS+N
Sbjct: 148 SISSVN 153



 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 32  RGHSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 88


>gi|308456283|ref|XP_003090594.1| CRE-EGL-38 protein [Caenorhabditis remanei]
 gi|308262358|gb|EFP06311.1| CRE-EGL-38 protein [Caenorhabditis remanei]
          Length = 293

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+Y TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC +DNVP
Sbjct: 87  RFYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRVNPTMFAWEIRQKLIEDQICGEDNVP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRIV 155



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 52/61 (85%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +++  SH GVNQLGGVFVNGRPLPD +R +IV+++  G RPCDISRQL+VSHGCVSKIL 
Sbjct: 27  LISDGSHTGVNQLGGVFVNGRPLPDTIRAQIVDMSQRGTRPCDISRQLKVSHGCVSKILG 86

Query: 173 R 173
           R
Sbjct: 87  R 87


>gi|432878340|ref|XP_004073309.1| PREDICTED: paired box protein Pax-5-like [Oryzias latipes]
          Length = 156

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/63 (74%), Positives = 55/63 (87%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q  + +  HGGVNQLGGVF+NGRPLP VVR+RIVELA  GVRPC+ISR+LRV+HGC+SKI
Sbjct: 6   QNWIFTHGHGGVNQLGGVFINGRPLPQVVRKRIVELAQQGVRPCEISRRLRVTHGCISKI 65

Query: 171 LSR 173
           LSR
Sbjct: 66  LSR 68



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 51/66 (77%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY++TGS K G++GGSKPKVAT  VV  I   K +NP+MFAWEI DRL+ E +C Q+ VP
Sbjct: 68  RYHKTGSLKPGLMGGSKPKVATPIVVQRILQLKHKNPSMFAWEIHDRLVLERVCDQNCVP 127

Query: 74  SVSSIN 79
           S+SSIN
Sbjct: 128 SISSIN 133


>gi|195564310|ref|XP_002105764.1| eyeless [Drosophila simulans]
 gi|194201639|gb|EDX15215.1| eyeless [Drosophila simulans]
          Length = 429

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 55/68 (80%)

Query: 15  YYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPS 74
           YYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL E +C+ DN+PS
Sbjct: 99  YYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPS 158

Query: 75  VSSINRYI 82
           VSSINR +
Sbjct: 159 VSSINRVL 166


>gi|78370178|gb|ABB43130.1| Pax-6 [Daphnia pulex]
          Length = 288

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS K   IGGSKP+VAT+ VV  IA YKRE P++FAWEIRDRLL+EG+C+ D +P
Sbjct: 68  RYHETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNNDTIP 127

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 128 SVSSINRVL 136



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 14  HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 68


>gi|5822580|pdb|6PAX|A Chain A, Crystal Structure Of The Human Pax-6 Paired Domain-Dna
           Complex Reveals A General Model For Pax Protein-Dna
           Interactions
          Length = 133

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYY TGS +   IGGSKP+VAT  VV  IA YK+E P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 56  RYYATGSIRPRAIGGSKPRVATPEVVSKIAQYKQECPSIFAWEIRDRLLSEGVCTNDNIP 115

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 116 SVSSINRVL 124



 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 2   HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 56


>gi|268553949|ref|XP_002634962.1| C. briggsae CBR-PAX-2 protein [Caenorhabditis briggsae]
          Length = 346

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+Y TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC +DN P
Sbjct: 146 RFYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLMEDQICGEDNAP 205

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 206 SVSSINRIV 214



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 52/61 (85%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +++  SH GVNQLGGVFVNGRPLPD +R +IVE++  G RPCDISRQL+VSHGCVSKIL 
Sbjct: 86  LISDGSHTGVNQLGGVFVNGRPLPDSIRAQIVEMSQRGTRPCDISRQLKVSHGCVSKILG 145

Query: 173 R 173
           R
Sbjct: 146 R 146


>gi|328779009|ref|XP_001120031.2| PREDICTED: hypothetical protein LOC724238 [Apis mellifera]
          Length = 897

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 404 RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 463

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 464 SVSSINRVL 472



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 49/58 (84%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 347 SNGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 404


>gi|4185914|emb|CAA09227.1| DtPax-6 protein [Girardia tigrina]
          Length = 577

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS K   IGGSKP+VAT  VV  +  YK+E+P+MFAWEIRDR L +G
Sbjct: 69  VSKILC--RYYETGSIKPKAIGGSKPRVATNTVVRKVTIYKQESPSMFAWEIRDRPLQDG 126

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+QDN+PS+SSINR +
Sbjct: 127 VCNQDNLPSISSINRIL 143



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H G+NQLGG+FVNGRPLPDV RQRI+EL+ +G RPCDISR L+VS+GCVSKIL R
Sbjct: 19  KGHSGINQLGGIFVNGRPLPDVTRQRIIELSQSGARPCDISRILQVSNGCVSKILCR 75


>gi|2102726|gb|AAB58290.1| Pax-A [Hydra littoralis]
          Length = 640

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I   K ENP MFAWEIR+ LLAEGIC   NVP
Sbjct: 67  RYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNGNVP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRIL 135



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 47/54 (87%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPD +R RI+ELA  GVRP +ISRQL VSHGCVSKIL R
Sbjct: 14  GGVNQLGGVFVNGRPLPDYMRHRIIELAQCGVRPSEISRQLLVSHGCVSKILGR 67


>gi|89242118|dbj|BAA36344.2| pox neuro [Hydra vulgaris]
          Length = 640

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I   K ENP MFAWEIR+ LLAEGIC   NVP
Sbjct: 67  RYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNGNVP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRIL 135



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 47/54 (87%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPD +R RI+ELA  GVRP +ISRQL VSHGCVSKIL R
Sbjct: 14  GGVNQLGGVFVNGRPLPDYMRHRIIELAQCGVRPSEISRQLLVSHGCVSKILGR 67


>gi|380013541|ref|XP_003690812.1| PREDICTED: proton-coupled amino acid transporter 2-like [Apis
           florea]
          Length = 537

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 368 RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 427

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 428 SVSSINRVL 436



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 49/58 (84%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 311 SNGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 368


>gi|221128697|ref|XP_002155904.1| PREDICTED: uncharacterized protein LOC100192230 isoform 1 [Hydra
           magnipapillata]
 gi|449679734|ref|XP_004209408.1| PREDICTED: uncharacterized protein LOC100192230 isoform 2 [Hydra
           magnipapillata]
          Length = 640

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I   K ENP MFAWEIR+ LLAEGIC   NVP
Sbjct: 67  RYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNGNVP 126

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 127 SVSSINRIL 135



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 47/54 (87%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPD +R RI+ELA  GVRP +ISRQL VSHGCVSKIL R
Sbjct: 14  GGVNQLGGVFVNGRPLPDYMRHRIIELAQCGVRPSEISRQLLVSHGCVSKILGR 67


>gi|37575437|gb|AAQ93683.1| Pax protein [Caenorhabditis briggsae]
          Length = 287

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+Y TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC +DN P
Sbjct: 87  RFYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLMEDQICGEDNAP 146

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 147 SVSSINRIV 155



 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 54/68 (79%)

Query: 106 PDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHG 165
           P+     +++  SH GVNQLGGVFVNGRPLPD +R +IVE++  G RPCDISRQL+VSHG
Sbjct: 20  PNFQFDPLISDGSHTGVNQLGGVFVNGRPLPDSIRAQIVEMSQRGTRPCDISRQLKVSHG 79

Query: 166 CVSKILSR 173
           CVSKIL R
Sbjct: 80  CVSKILGR 87


>gi|37575435|gb|AAQ93682.1| Pax protein [Caenorhabditis briggsae]
          Length = 319

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+Y TGS + GVIGGSKPKVAT  VV+ IA YKR NPTMFAWEIR +L+ + IC +DN P
Sbjct: 119 RFYSTGSVRPGVIGGSKPKVATPRVVECIAGYKRANPTMFAWEIRQKLMEDQICGEDNAP 178

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 179 SVSSINRIV 187



 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 52/61 (85%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           +++  SH GVNQLGGVFVNGRPLPD +R +IVE++  G RPCDISRQL+VSHGCVSKIL 
Sbjct: 59  LISDGSHTGVNQLGGVFVNGRPLPDSIRAQIVEMSQRGTRPCDISRQLKVSHGCVSKILG 118

Query: 173 R 173
           R
Sbjct: 119 R 119


>gi|358340084|dbj|GAA48050.1| paired box protein Pax-6 [Clonorchis sinensis]
          Length = 981

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL EG
Sbjct: 56  VSKILC--RYYETGSIRPKAIGGSKPRVATNMVVLKIAHYKRECPSIFAWEIRDRLLQEG 113

Query: 66  ICSQDNVPSVSSINRYITYV 85
           +C+ +N+PSVSSINR +  V
Sbjct: 114 VCTPENIPSVSSINRVLRNV 133



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 8   HSGVNQLGGMFVNGRPLPDSTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 62


>gi|345492062|ref|XP_001601318.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
          Length = 593

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 5   HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|340728299|ref|XP_003402463.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
          Length = 826

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 340 RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 399

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 400 SVSSINRVL 408



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 49/58 (84%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 283 SGGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 340


>gi|254733064|gb|ACT79977.1| eyeless, partial [Nasonia vitripennis]
          Length = 225

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 57  RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 116

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 117 SVSSINRVL 125



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 3   HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 57


>gi|259013376|ref|NP_001158393.1| pox-neuro [Saccoglossus kowalevskii]
 gi|90659987|gb|ABD97270.1| pox-neuro [Saccoglossus kowalevskii]
          Length = 403

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            GVNQLGGVFVNGRPLPD +R RIVELAH GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 7   AGVNQLGGVFVNGRPLPDFIRARIVELAHLGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I  YK+ENP++FAWEIRD+LL E +C ++ +P
Sbjct: 60  RYYETGSIRPGNIGGSKPKVATPLVVKKILQYKQENPSIFAWEIRDKLLQERVCDENTIP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRIL 128


>gi|19032236|emb|CAC85262.2| Pax-6B protein [Dugesia japonica]
          Length = 579

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYY TGS K   IGGSKP+VAT  VV  +  YK+E+P+MFAWEIRDRLL +G
Sbjct: 69  VSKILC--RYYGTGSIKPKAIGGSKPRVATNTVVRKVTIYKQESPSMFAWEIRDRLLQDG 126

Query: 66  ICSQDNVPSVSSINRYI 82
           +C+QDN+PS+SSINR +
Sbjct: 127 VCNQDNLPSISSINRIL 143



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H G+NQLGG+FVNGRPLPDV RQRI+EL+ +G RPCDISR L+VS+GCVSKIL R
Sbjct: 19  KGHSGINQLGGMFVNGRPLPDVTRQRIIELSQSGARPCDISRILQVSNGCVSKILCR 75


>gi|440647295|dbj|BAM74254.1| Pax-6 variant form4 [Idiosepius paradoxus]
          Length = 482

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEI DRLL+EG+C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEIGDRLLSEGVCTQDNIP 125

Query: 74  SVSSINRYI 82
            VSSINR +
Sbjct: 126 GVSSINRVL 134



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|350403203|ref|XP_003486730.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
          Length = 796

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 304 RYYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 363

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 364 SVSSINRVL 372



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 49/58 (84%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S  H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 247 SGGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 304


>gi|237784130|gb|ACR19858.1| PAX2/5/8 [Octopus bimaculoides]
          Length = 96

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/51 (94%), Positives = 48/51 (94%)

Query: 123 NQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           NQLGGVFVNGRPLPD VRQRIVELAH GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 1   NQLGGVFVNGRPLPDAVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 51



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/46 (80%), Positives = 41/46 (89%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRD 59
          RYYETGS K GVIGGSKPKVAT  VV+AIA YK+ENPT+F+WEIRD
Sbjct: 51 RYYETGSIKPGVIGGSKPKVATPKVVEAIARYKQENPTIFSWEIRD 96


>gi|241999742|ref|XP_002434514.1| paired box protein Pax-6, putative [Ixodes scapularis]
 gi|215497844|gb|EEC07338.1| paired box protein Pax-6, putative [Ixodes scapularis]
          Length = 427

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 3/96 (3%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 64  RYYETGSIRPRAIGGSKPRVATPPVVGKIAEYKRECPSIFAWEIRDRLLSEGVCNNDNIP 123

Query: 74  SVSSINRYI-TYVPIGHGGVNQLGGVF--VNGRPLP 106
           SV+S+   +     I  GG + +      +NG+P P
Sbjct: 124 SVTSVECPMRIRRSIAFGGSDSVYDKLRMLNGQPWP 159



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 8   KGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 64


>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
          Length = 431

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/80 (60%), Positives = 59/80 (73%)

Query: 15  YYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPS 74
           YYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGIC+ +N+PS
Sbjct: 51  YYETGSIRPRAIGGSKPRVATPEVVAKIAQFKRECPSIFAWEIRDRLLSEGICTNENIPS 110

Query: 75  VSSINRYITYVPIGHGGVNQ 94
           VSSINR +  +  G     Q
Sbjct: 111 VSSINRVLRNLASGEKNTLQ 130



 Score = 82.4 bits (202), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 41/47 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHG 165
           H GVNQLGGVFV+GRPLPD  RQ+IVELAH G RPCDISR L+VS+G
Sbjct: 4   HSGVNQLGGVFVSGRPLPDSTRQKIVELAHQGARPCDISRLLQVSNG 50


>gi|195064323|ref|XP_001996545.1| GH24002 [Drosophila grimshawi]
 gi|193892091|gb|EDV90957.1| GH24002 [Drosophila grimshawi]
          Length = 797

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/66 (71%), Positives = 53/66 (80%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRESNLH 178
           H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R+  + 
Sbjct: 101 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRDEMVA 160

Query: 179 NYRLVR 184
            YR  R
Sbjct: 161 EYRFER 166


>gi|348581308|ref|XP_003476419.1| PREDICTED: paired box protein Pax-1 [Cavia porcellus]
          Length = 447

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 55/62 (88%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           R +A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL
Sbjct: 82  RRIAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKIL 141

Query: 172 SR 173
           +R
Sbjct: 142 AR 143



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 143 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 202

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 203 SVSSISRIL 211


>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
          Length = 625

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS K G IGGSKPKVATA V + I  YK+ENP +F+WEIR+RL+ EG
Sbjct: 65  VSKILC--RYQETGSIKPGAIGGSKPKVATADVDNKIEEYKKENPGIFSWEIRERLIKEG 122

Query: 66  ICSQDNVPSVSSINRYI 82
           IC + NVPSVSSI+R +
Sbjct: 123 ICDRSNVPSVSSISRTL 139



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 47/54 (87%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGG+F+NGRPLP  VR +IVE+A +GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 18  GRVNQLGGMFINGRPLPSHVRHKIVEMAAHGVRPCVISRQLRVSHGCVSKILCR 71


>gi|108512958|gb|ABF93171.1| transcription factor Pax-C [Bellonella rigida]
          Length = 67

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 53/64 (82%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS + G IGGSKPKVAT PVV  I  YK++NPT+FAWEIRDRL+ EGIC ++N P
Sbjct: 4  RYYETGSIRPGSIGGSKPKVATPPVVSKILQYKQQNPTIFAWEIRDRLVEEGICDRENTP 63

Query: 74 SVSS 77
          SVSS
Sbjct: 64 SVSS 67


>gi|344239283|gb|EGV95386.1| Paired box protein Pax-1 [Cricetulus griseus]
          Length = 378

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 55/65 (84%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           +R    A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVS
Sbjct: 15  IRPGASAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVS 74

Query: 169 KILSR 173
           KIL+R
Sbjct: 75  KILAR 79



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 79  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 138

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 139 SVSSISRIL 147


>gi|440647287|dbj|BAM74250.1| Pax-6 authentic variant [Idiosepius paradoxus]
          Length = 459

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWE+ DRLL+EG+C+QDN+P
Sbjct: 66  RYYETGSIRPRAIGGSKPRVATPEVVQKIAQFKRECPSIFAWEVGDRLLSEGVCTQDNIP 125

Query: 74  SVSSINRYI 82
            VSSINR +
Sbjct: 126 GVSSINRVL 134



 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 12  HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 66


>gi|357625929|gb|EHJ76203.1| hypothetical protein KGM_01567 [Danaus plexippus]
          Length = 367

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPDVVR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 18  QAGVNQLGGVFVNGRPLPDVVRKRIVELAILGVRPCDISRQLLVSHGCVSKILTR 72



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+ENP MFAWEIR+RLL+  +C   ++
Sbjct: 72  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRLKQENPGMFAWEIRERLLSARVCEPHSI 131

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 132 PSVSSVNRIL 141


>gi|449504399|ref|XP_002199853.2| PREDICTED: uncharacterized protein LOC100220951 [Taeniopygia
           guttata]
          Length = 1136

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 56/70 (80%)

Query: 104 PLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVS 163
           P P  V   ++A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVS
Sbjct: 181 PCPTAVFVHLLAEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVS 240

Query: 164 HGCVSKILSR 173
           HGCVSKIL+R
Sbjct: 241 HGCVSKILAR 250



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 250 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 309

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 310 SVSSISRIL 318


>gi|380011516|ref|XP_003689848.1| PREDICTED: uncharacterized protein LOC100871873 [Apis florea]
          Length = 396

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 54/65 (83%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           VR +   + S  GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVS
Sbjct: 4   VRLQSNEATSQAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVS 63

Query: 169 KILSR 173
           KIL+R
Sbjct: 64  KILTR 68



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 68  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 127

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 128 PSVSSVNRIL 137


>gi|283365203|dbj|BAI66184.1| transcription factor Pax-A [Cladonema radiatum]
          Length = 671

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I   K ENP MFAWEIR+ LLAEGIC   NVP
Sbjct: 81  RYYETGSVRPGAIGGSKPKVATPKVVCRIVKLKEENPCMFAWEIRNSLLAEGICDNGNVP 140

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 141 SVSSINRIL 149



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/56 (80%), Positives = 48/56 (85%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S GGVNQLGGVFVNGRPLPD +R RI+ELA  GVRP +ISRQL VSHGCVSKIL R
Sbjct: 26  SPGGVNQLGGVFVNGRPLPDYMRHRIIELAQCGVRPSEISRQLLVSHGCVSKILGR 81


>gi|7191040|gb|AAC15713.2| transcription factor Pax-A [Acropora millepora]
          Length = 615

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I +YK +NP +FAWEIR+ LL++G+C + NVP
Sbjct: 61  RYYETGSVRPGAIGGSKPKVATPRVVSKILAYKEDNPCIFAWEIRNNLLSDGVCDKSNVP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRIL 129



 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/61 (77%), Positives = 51/61 (83%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           ++  R  GGVNQLGGVFVNGRPLPD +R RIVELAH GVRP +ISRQL VSHGCVSKIL 
Sbjct: 1   MMPHRGPGGVNQLGGVFVNGRPLPDYMRHRIVELAHCGVRPSEISRQLLVSHGCVSKILG 60

Query: 173 R 173
           R
Sbjct: 61  R 61


>gi|354468132|ref|XP_003496521.1| PREDICTED: paired box protein Pax-1-like [Cricetulus griseus]
          Length = 460

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 55/65 (84%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           +R    A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVS
Sbjct: 97  IRPGASAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVS 156

Query: 169 KILSR 173
           KIL+R
Sbjct: 157 KILAR 161



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 161 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 220

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 221 SVSSISRIL 229


>gi|395507769|ref|XP_003758193.1| PREDICTED: paired box protein Pax-1-like [Sarcophilus harrisii]
          Length = 387

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 55/63 (87%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           +R+   +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKI
Sbjct: 22  ERLQGEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKI 81

Query: 171 LSR 173
           L+R
Sbjct: 82  LAR 84



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 84  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 143

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 144 SVSSISRIL 152


>gi|327259825|ref|XP_003214736.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Anolis
           carolinensis]
          Length = 386

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 22/29 (75%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAI 42
          RYYETGS +   IGGSKP+VAT  VV +I
Sbjct: 59 RYYETGSIRPRAIGGSKPRVATPEVVSSI 87


>gi|115501609|gb|ABI98852.1| paired box 6 transcript variant 7 [Columba livia]
          Length = 386

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59



 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 22/29 (75%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAI 42
          RYYETGS +   IGGSKP+VAT  VV +I
Sbjct: 59 RYYETGSIRPRAIGGSKPRVATPEVVSSI 87


>gi|156380514|ref|XP_001631813.1| predicted protein [Nematostella vectensis]
 gi|156218860|gb|EDO39750.1| predicted protein [Nematostella vectensis]
          Length = 604

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I  YK +NP +FAWEIR+ LLA+G+C + NVP
Sbjct: 60  RYYETGSVRPGAIGGSKPKVATPKVVSKILEYKDKNPCIFAWEIRNNLLADGVCDKTNVP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRIL 128



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 49/57 (85%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R  GGVNQLGGVFVNGRPLPD +R RIVELAH GVRP +ISRQL VSHGCVSKIL R
Sbjct: 4   RGPGGVNQLGGVFVNGRPLPDYMRHRIVELAHCGVRPSEISRQLLVSHGCVSKILGR 60


>gi|56785868|gb|AAW29066.1| homeodomain transcription factor PaxA [Nematostella vectensis]
          Length = 604

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I  YK +NP +FAWEIR+ LLA+G+C + NVP
Sbjct: 60  RYYETGSVRPGAIGGSKPKVATPKVVSKILEYKDKNPCIFAWEIRNNLLADGVCDKTNVP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRIL 128



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 49/57 (85%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           R  GGVNQLGGVFVNGRPLPD +R RIVELAH GVRP +ISRQL VSHGCVSKIL R
Sbjct: 4   RGPGGVNQLGGVFVNGRPLPDYMRHRIVELAHCGVRPSEISRQLLVSHGCVSKILGR 60


>gi|115501611|gb|ABI98853.1| paired box 6 transcript variant 8 [Columba livia]
          Length = 380

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59



 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 22/29 (75%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAI 42
          RYYETGS +   IGGSKP+VAT  VV +I
Sbjct: 59 RYYETGSIRPRAIGGSKPRVATPEVVSSI 87


>gi|126671099|gb|ABN09916.2| paired box 6B transcription factor [Helobdella sp. MS-2000]
          Length = 432

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ IA YK E P++FAWEIRDRLL+E +C+Q+N+P
Sbjct: 54  RYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKGECPSIFAWEIRDRLLSECLCTQENIP 113

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 114 SVSSINRVL 122



 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 48/54 (88%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            GVNQLGGVFVNGRPLPD  RQRIVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   SGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGR 54


>gi|1835186|emb|CAA71094.1| Pax-6 [Phallusia mammillata]
          Length = 464

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETG+ +   IGGSKP+VAT  VV+ IA YKRE P++FAWEIRDRLL E +C+ +N+P
Sbjct: 91  RYYETGTIRPRAIGGSKPRVATPQVVNKIAMYKRECPSIFAWEIRDRLLNEAVCNAENIP 150

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPLPD 107
           SVSSINR +  +   +G V   G    N   LPD
Sbjct: 151 SVSSINRVLRNLNGENGRVFSEGNS-PNKNHLPD 183



 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGG+FVNGRPLPD +RQ+IVE AHNG RPCDISR L+VS+GCVSKIL+R
Sbjct: 35  KGHSGVNQLGGMFVNGRPLPDSIRQKIVEFAHNGARPCDISRILQVSNGCVSKILAR 91


>gi|410913827|ref|XP_003970390.1| PREDICTED: paired box protein Pax-2-like [Takifugu rubripes]
          Length = 189

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 54/63 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRESNLH 178
           H GVNQLGGVF+NGRPLPDVVRQ IVELA  GVRPC+ISR+LRVSHGCVSKIL+R +   
Sbjct: 16  HSGVNQLGGVFINGRPLPDVVRQSIVELAGRGVRPCEISRRLRVSHGCVSKILARYNETG 75

Query: 179 NYR 181
           + R
Sbjct: 76  SIR 78



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 50/69 (72%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS +  V+GGSKPKVAT  VV  I   KR NP MFA EIRDRLL E +C  +NVP
Sbjct: 70  RYNETGSIRPAVMGGSKPKVATPRVVQTILHLKRINPGMFAREIRDRLLLERVCDNENVP 129

Query: 74  SVSSINRYI 82
           SVSSINR I
Sbjct: 130 SVSSINRII 138


>gi|390462532|ref|XP_003732868.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1
           [Callithrix jacchus]
          Length = 528

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G        P  + Q      ++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 79  GHPGARQLAG--------PRAMEQ------TYGEVNQLGGVFVNGRPLPNAIRLRIVELA 124

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 125 QLGIRPCDISRQLRVSHGCVSKILAR 150



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 150 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 209

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 210 SVSSISRIL 218


>gi|17227115|gb|AAL38015.1| PAX6 [Mus musculus]
          Length = 352

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/49 (71%), Positives = 39/49 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLL 62
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLL 107


>gi|432092126|gb|ELK24812.1| Paired box protein Pax-1 [Myotis davidii]
          Length = 343

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 41  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 99



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 99  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 158

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 159 SVSSISRIL 167


>gi|644847|gb|AAA81364.1| AmphiPax-1 [Branchiostoma floridae]
          Length = 337

 Score = 99.4 bits (246), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELAH G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAHVGIRPCDISRQLRVSHGCVSKILAR 62



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV AI  YK  +P +FAWEIRDRLLAEG+C + NVP
Sbjct: 62  RYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKYNVP 121

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 122 SVSSISRIL 130


>gi|321464774|gb|EFX75780.1| eyeless [Daphnia pulex]
          Length = 619

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  I+ +KRE P++FAWEIRDRLL E IC+ DN+P
Sbjct: 71  RYYETGSIRPRAIGGSKPRVATNDVVGKISQFKRECPSIFAWEIRDRLLQEAICNNDNIP 130

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 131 SVSSINRVL 139



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFV+GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 16  SHSGVNQLGGVFVSGRPLPDQTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 71


>gi|194382456|dbj|BAG64398.1| unnamed protein product [Homo sapiens]
          Length = 433

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 71  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 129



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 129 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 188

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 189 SVSSISRIL 197


>gi|78370180|gb|ABB43131.1| Pax-6 [Daphnia pulex]
          Length = 469

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  I+ +KRE P++FAWEIRDRLL E IC+ DN+P
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATNDVVGKISQFKRECPSIFAWEIRDRLLQEAICNNDNIP 118

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 119 SVSSINRVL 127



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SH GVNQLGGVFV+GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 4   SHSGVNQLGGVFVSGRPLPDQTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|395752004|ref|XP_003780399.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Pongo
           abelii]
          Length = 510

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 71  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 129



 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 129 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 188

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 189 SVSSISRIL 197


>gi|397478703|ref|XP_003810679.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Pan
           paniscus]
          Length = 534

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G               +   +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLAGP--------------LAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|327270590|ref|XP_003220072.1| PREDICTED: paired box protein Pax-1-like [Anolis carolinensis]
          Length = 446

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S+G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 25  QSYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 81



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 81  RYHETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 140

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 141 SVSSISRIL 149


>gi|440911588|gb|ELR61237.1| Paired box protein Pax-1, partial [Bos grunniens mutus]
          Length = 357

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 1   AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|357616883|gb|EHJ70462.1| hypothetical protein KGM_02181 [Danaus plexippus]
          Length = 133

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 53/63 (84%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 68  RYYETGSIRPRAIGGSKPRVATAEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTSDNIP 127

Query: 74  SVS 76
           SVS
Sbjct: 128 SVS 130



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S  H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 10  SSAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 68


>gi|297260417|ref|XP_001095275.2| PREDICTED: paired box protein Pax-1 [Macaca mulatta]
          Length = 433

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 71  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 129



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 129 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 188

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 189 SVSSISRIL 197


>gi|410898240|ref|XP_003962606.1| PREDICTED: paired box protein Pax-1-like, partial [Takifugu
           rubripes]
          Length = 360

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 60



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 60  RYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVP 119

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 120 SVSSISRIL 128


>gi|9652038|gb|AAF91372.1|AF260127_1 transcription factor Pax-B1 [Cladonema californicum]
          Length = 689

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           V   +HGGVNQLGG+FVNGRPLP+ +R++IV+L+  GVRPCDISR+LRVSHGCVSKIL R
Sbjct: 62  VFKENHGGVNQLGGIFVNGRPLPEHIRRKIVDLSSQGVRPCDISRELRVSHGCVSKILGR 121



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  V+  IA YK +NPTMFAWEIR+ LL + IC  ++VP
Sbjct: 121 RFYETGSIRPGVIGGSKPKVATPSVIQKIAEYKTQNPTMFAWEIRECLLNDNICDAESVP 180

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 181 SVSSINRIV 189


>gi|114681249|ref|XP_514547.2| PREDICTED: paired box protein Pax-1 [Pan troglodytes]
          Length = 534

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G               +   +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLAGP--------------LAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|357601948|gb|EHJ63203.1| pox meso [Danaus plexippus]
          Length = 232

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 5/74 (6%)

Query: 100 VNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQ 159
           V+G P P      +V ++ +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQ
Sbjct: 32  VSGMPPPG-----MVGAQQYGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQ 86

Query: 160 LRVSHGCVSKILSR 173
           LRVSHGCVSKIL+R
Sbjct: 87  LRVSHGCVSKILAR 100



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 57/84 (67%), Gaps = 9/84 (10%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLLA+G+C + NVP
Sbjct: 100 RYHETGSILPGAIGGSKPRVTTPKVVSYIKQLKAKDPGIFAWEIRDRLLADGVCDKYNVP 159

Query: 74  SVSSINRYITYVPIGHGGVNQLGG 97
           SVSSI+R +          N+LGG
Sbjct: 160 SVSSISRILR---------NKLGG 174


>gi|355563404|gb|EHH19966.1| HuP48, partial [Macaca mulatta]
          Length = 447

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 68



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 68  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 127

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 128 SVSSISRIL 136


>gi|363731254|ref|XP_003640945.1| PREDICTED: paired box protein Pax-1-like [Gallus gallus]
          Length = 419

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 77/135 (57%), Gaps = 23/135 (17%)

Query: 52  MFAWEIRDRLLAEGICSQDNVPSVSSINRYITYVPIGHGGVNQLGG-----VFVNGRPL- 105
           M +WE R  LL EG+  + N      I+      P    G N+ G          GRP+ 
Sbjct: 1   MGSWE-RRVLLQEGLKKKKNTGKDIDID---AVNPASDTGANREGADKERMAAYRGRPVN 56

Query: 106 -------PDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISR 158
                  PD       A  ++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISR
Sbjct: 57  HASISGCPDR------AEHTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISR 110

Query: 159 QLRVSHGCVSKILSR 173
           QLRVSHGCVSKIL+R
Sbjct: 111 QLRVSHGCVSKILAR 125



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 3/93 (3%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 125 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 184

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPLP 106
           SVSSI+R +       G ++Q GG +  G+  P
Sbjct: 185 SVSSISRILRNK---IGSLSQPGGPYDGGKQPP 214


>gi|9652040|gb|AAF91373.1|AF260128_1 transcription factor Pax-B [Cladonema californicum]
          Length = 686

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           V   +HGGVNQLGG+FVNGRPLP+ +R++IV+L+  GVRPCDISR+LRVSHGCVSKIL R
Sbjct: 62  VFKENHGGVNQLGGIFVNGRPLPEHIRRKIVDLSSQGVRPCDISRELRVSHGCVSKILGR 121



 Score = 98.6 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  V+  IA YK +NPTMFAWEIR+ LL + IC  ++VP
Sbjct: 121 RFYETGSIRPGVIGGSKPKVATPSVIQKIAEYKTQNPTMFAWEIRECLLNDNICDAESVP 180

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 181 SVSSINRIV 189


>gi|297481580|ref|XP_002692205.1| PREDICTED: paired box protein Pax-1 [Bos taurus]
 gi|296481426|tpg|DAA23541.1| TPA: paired box 1-like [Bos taurus]
          Length = 500

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)

Query: 104 PLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVS 163
           PLP +      A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVS
Sbjct: 76  PLPSLW-PGASAEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVS 134

Query: 164 HGCVSKILSR 173
           HGCVSKIL+R
Sbjct: 135 HGCVSKILAR 144



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 144 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 203

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 204 SVSSISRIL 212


>gi|449501716|ref|XP_004176235.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
           [Taeniopygia guttata]
          Length = 546

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 208 RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 267

Query: 74  SVSS 77
           SVSS
Sbjct: 268 SVSS 271



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 52/77 (67%), Gaps = 15/77 (19%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------- 161
           QR   +R+  GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+         
Sbjct: 133 QRAGPARA-AGVNQLGGVFVXGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQV 191

Query: 162 -----VSHGCVSKILSR 173
                VS+GCVSKIL R
Sbjct: 192 LDNQNVSNGCVSKILGR 208


>gi|281339380|gb|EFB14964.1| hypothetical protein PANDA_012250 [Ailuropoda melanoleuca]
          Length = 466

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 7   AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 65



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 65  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 124

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 125 SVSSISRIL 133


>gi|197276661|ref|NP_006183.2| paired box protein Pax-1 isoform 1 [Homo sapiens]
 gi|296439493|sp|P15863.4|PAX1_HUMAN RecName: Full=Paired box protein Pax-1; AltName: Full=HuP48
          Length = 534

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G               +   +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLAGP--------------LAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|380013620|ref|XP_003690850.1| PREDICTED: paired box protein Pax-6-like, partial [Apis florea]
          Length = 166

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 51/61 (83%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV+ IA YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 106 RYYETGSIKPRAIGGSKPRVATTPVVNKIADYKRECPSIFAWEIRDRLLQEGVCNNDNIP 165

Query: 74  S 74
           S
Sbjct: 166 S 166



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++  H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 48  SAAGHSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 106


>gi|426391126|ref|XP_004061935.1| PREDICTED: paired box protein Pax-1 [Gorilla gorilla gorilla]
          Length = 457

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G               +   +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLAGP--------------LAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|242021507|ref|XP_002431186.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
 gi|212516435|gb|EEB18448.1| Paired box protein Pax-1, putative [Pediculus humanus corporis]
          Length = 306

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 56/65 (86%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
           ++++  + + +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVS
Sbjct: 1   MKRKQTSVQQYGEVNQLGGVFVNGRPLPNTVRMRIVELAQLGIRPCDISRQLRVSHGCVS 60

Query: 169 KILSR 173
           KIL+R
Sbjct: 61  KILAR 65



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R++ETGS   G IGGSKP+V T  VV  I   K+++P +FAWEIRDRLL++GIC + NVP
Sbjct: 65  RFHETGSILPGAIGGSKPRVTTPKVVSYIKGLKQKDPGIFAWEIRDRLLSDGICDKYNVP 124

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 125 SVSSISRIL 133


>gi|123704971|ref|NP_001074061.1| paired box protein Pax-1 [Danio rerio]
 gi|120538212|gb|AAI29449.1| Zgc:158781 [Danio rerio]
          Length = 359

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 64



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 64  RYNETGSILPGAIGGSKPRVTTPNVVKNIRDYKQSDPGIFAWEIRDRLLADGVCDKYNVP 123

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 124 SVSSISRIL 132


>gi|144369353|dbj|BAF56225.1| Pax-B [Coeloplana willeyi]
          Length = 457

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 48/53 (90%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGG F NGRPLPD VRQ+IVELA +GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 60  GVNQLGGSFRNGRPLPDEVRQKIVELAQHGVRPCDISRQLRVSHGCVSKILGR 112



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+ +TGS   G IGGSKP+VAT  VV  I  YK  NP+MFAWEIRDRLL +G+C  + VP
Sbjct: 112 RFTDTGSVMPGAIGGSKPRVATPEVVAVIERYKNANPSMFAWEIRDRLLLDGMCP-NKVP 170

Query: 74  SVSSINRYI 82
           S S+INR +
Sbjct: 171 SASTINRIL 179


>gi|291238206|ref|XP_002739022.1| PREDICTED: paired box protein pax2.1 splice-like [Saccoglossus
           kowalevskii]
          Length = 328

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V+T  V++ I+ YK EN +MFAWEIR+RLL EG+C+++N+P
Sbjct: 60  RYSETGSILPGAIGGSKPRVSTPEVIERISDYKHENSSMFAWEIRERLLIEGVCTKENLP 119

Query: 74  SVSSINRYI--TYVPIGHGGVNQLGGVFVN 101
           SVSSINR +  T + +G       G +  N
Sbjct: 120 SVSSINRILRNTTMQVGDASQEDSGDIEKN 149



 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 51/62 (82%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A +  GG+NQLGG+F NGRPLP   R RI+ELAH G+RPCDISRQL VSHGCVSKILSR
Sbjct: 1   MAHKGQGGINQLGGIFANGRPLPFHTRHRILELAHLGLRPCDISRQLLVSHGCVSKILSR 60

Query: 174 ES 175
            S
Sbjct: 61  YS 62


>gi|390349968|ref|XP_003727318.1| PREDICTED: paired box protein Pax-6-like isoform 2
           [Strongylocentrotus purpuratus]
          Length = 156

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 51/58 (87%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           SR H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 37  SRGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 94



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 52/63 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAE IC+Q+N+P
Sbjct: 94  RYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQENIP 153

Query: 74  SVS 76
           SVS
Sbjct: 154 SVS 156


>gi|405972995|gb|EKC37735.1| Paired box protein Pax-8 [Crassostrea gigas]
          Length = 389

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 50/53 (94%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGGVFVNGRPLP+ VR+RIVELAH GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 10  GVNQLGGVFVNGRPLPEHVRRRIVELAHMGVRPCDISRQLLVSHGCVSKILTR 62



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 6/95 (6%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RYYETGS K G IGGSKPK VAT  ++  I   KR++P  FAWEIRD+LL  GIC + N+
Sbjct: 62  RYYETGSIKPGSIGGSKPKQVATPYIIKRILDIKRQHPGSFAWEIRDQLLTLGICDEQNI 121

Query: 73  PSVSSINRYI----TYVPIGHGGVNQLGGVFVNGR 103
           PSVSSINR +    T+  +G+   + LG   + GR
Sbjct: 122 PSVSSINRILRNSGTFA-LGYNAEDLLGYQSMFGR 155


>gi|380036026|ref|NP_001244025.1| paired box protein Pax-1 isoform 2 [Homo sapiens]
          Length = 457

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G               +   +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLAGP--------------LAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|322799280|gb|EFZ20671.1| hypothetical protein SINV_15307 [Solenopsis invicta]
          Length = 170

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 22  QAGVNQLGGVFVNGRPLPDCVRQRIVQLAMVGVRPCDISRQLLVSHGCVSKILTR 76


>gi|2102730|gb|AAB58292.1| Pax-A1 [Chrysaora quinquecirrha]
 gi|2102732|gb|AAB58293.1| Pax-A2 [Chrysaora quinquecirrha]
          Length = 127

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I   K ENP MFAWEIR+ LL+EG+C   NVP
Sbjct: 56  RYYETGSVRPGAIGGSKPKVATPKVVARIVKLKEENPCMFAWEIRNTLLSEGVCDNTNVP 115

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 116 SVSSINRIL 124



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 48/54 (88%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GGVNQLGGVFVNGRPLPD +R RI+ELAH GVRP +ISRQL VSHGCVSKIL R
Sbjct: 3   GGVNQLGGVFVNGRPLPDYMRHRIIELAHCGVRPSEISRQLLVSHGCVSKILGR 56


>gi|328793870|ref|XP_001122746.2| PREDICTED: hypothetical protein LOC727035 [Apis mellifera]
          Length = 399

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 17  QAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVSKILTR 71



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 71  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 130

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 131 PSVSSVNRIL 140


>gi|355784744|gb|EHH65595.1| HuP48, partial [Macaca fascicularis]
          Length = 447

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 68



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 68  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 127

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 128 SVSSISRIL 136


>gi|334312720|ref|XP_001382098.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1-like
           [Monodelphis domestica]
          Length = 455

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 53/62 (85%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           R    +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL
Sbjct: 91  RAAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKIL 150

Query: 172 SR 173
           +R
Sbjct: 151 AR 152



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 152 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 211

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 212 SVSSISRIL 220


>gi|170046563|ref|XP_001850830.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167869312|gb|EDS32695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 335

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD+VR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 213 QAGVNQLGGVFVNGRPLPDIVRRRIVELALMGVRPCDISRQLLVSHGCVSKILTR 267


>gi|426241744|ref|XP_004014749.1| PREDICTED: paired box protein Pax-1 [Ovis aries]
          Length = 544

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 191 AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 249



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 249 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 308

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 309 SVSSISRIL 317


>gi|307182411|gb|EFN69647.1| Paired box protein Pax-6 [Camponotus floridanus]
          Length = 206

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/65 (72%), Positives = 53/65 (81%)

Query: 109 VRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVS 168
            R R+ A+  H GVNQLGGVFV GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVS
Sbjct: 14  ARGRLAANNGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVS 73

Query: 169 KILSR 173
           KIL R
Sbjct: 74  KILGR 78



 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 54/67 (80%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV+ I+ YK E P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 78  RYYETGSIRPRAIGGSKPRVATAEVVNKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIP 137

Query: 74  SVSSINR 80
           S+  ++R
Sbjct: 138 SLKLVDR 144


>gi|321446368|gb|EFX60850.1| hypothetical protein DAPPUDRAFT_122807 [Daphnia pulex]
          Length = 128

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 55/69 (79%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT+ VV  IA YKRE P++FAWEIRDRLL+EG+C+ D +P
Sbjct: 59  RYYETGSIKPRAIGGSKPRVATSCVVTKIADYKRECPSIFAWEIRDRLLSEGVCNNDTIP 118

Query: 74  SVSSINRYI 82
           SVS  + Y+
Sbjct: 119 SVSPFDYYL 127



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 5   HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59


>gi|307187745|gb|EFN72717.1| Paired box pox-neuro protein [Camponotus floridanus]
          Length = 388

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 49/53 (92%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 1   GVNQLGGVFVNGRPLPDCVRQRIVQLAMVGVRPCDISRQLLVSHGCVSKILTR 53



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 53  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 112

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 113 PSVSSVNRIL 122


>gi|402883361|ref|XP_003905188.1| PREDICTED: paired box protein Pax-1 [Papio anubis]
          Length = 457

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL G        P  + Q      ++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQLTG--------PRAMEQ------TYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|200224|gb|AAA39888.1| Pax-1 protein [Mus musculus]
          Length = 361

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|380029723|ref|XP_003698515.1| PREDICTED: uncharacterized protein LOC100870845 [Apis florea]
          Length = 426

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 38  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 92



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 92  RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 151

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 152 SVSSISRIL 160


>gi|348517493|ref|XP_003446268.1| PREDICTED: paired box protein Pax-1-like [Oreochromis niloticus]
          Length = 361

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|283365205|dbj|BAI66185.1| transcription factor Pax-B [Cladonema radiatum]
          Length = 714

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/56 (80%), Positives = 52/56 (92%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++GGVNQLGG+FVNGRPLP+ VR++IV+LA  GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 81  ANGGVNQLGGLFVNGRPLPEPVRRKIVDLASQGVRPCDISRQLRVSHGCVSKILGR 136



 Score = 97.4 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/78 (65%), Positives = 58/78 (74%), Gaps = 1/78 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+YETGS + GVIGGSKPKVAT  VV  IA YK +NPTMFAWEIR+ L+   IC  ++VP
Sbjct: 136 RFYETGSIRPGVIGGSKPKVATPSVVQKIADYKAQNPTMFAWEIRECLINNNICDVESVP 195

Query: 74  SVSSINRYITYVPIGHGG 91
           SVSSINR I    IG GG
Sbjct: 196 SVSSINR-IVRNRIGGGG 212


>gi|67043724|gb|AAY63958.1| green fluorescent protein-paired-box gene 9 fusion protein
           [Expression vector pEGFP-Pax9]
          Length = 593

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 55/69 (79%), Gaps = 4/69 (5%)

Query: 109 VRQRIVASRS----HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSH 164
           +R R  AS S     G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSH
Sbjct: 242 LRSRAQASNSMEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSH 301

Query: 165 GCVSKILSR 173
           GCVSKIL+R
Sbjct: 302 GCVSKILAR 310



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 310 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 369

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 370 SVSSISRIL 378


>gi|74137227|dbj|BAE21998.1| unnamed protein product [Mus musculus]
          Length = 361

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|383859409|ref|XP_003705187.1| PREDICTED: uncharacterized protein LOC100881433 isoform 1
           [Megachile rotundata]
          Length = 388

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 119

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 120 PSVSSVNRIL 129


>gi|9501358|emb|CAB38370.1| Pax1 protein [Mus musculus]
 gi|12658965|gb|AAK01146.1| PAX1 [Mus musculus]
 gi|148696578|gb|EDL28525.1| paired box gene 1 [Mus musculus]
 gi|187954343|gb|AAI40990.1| Pax1 protein [Mus musculus]
          Length = 361

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|449496563|ref|XP_002197278.2| PREDICTED: paired box protein Pax-1 [Taeniopygia guttata]
          Length = 566

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 52/59 (88%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  ++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 214 AEHTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 272



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 272 RYHETGSILPGAIGGSKPRVTTPAVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 331

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 332 SVSSISRIL 340


>gi|383859411|ref|XP_003705188.1| PREDICTED: uncharacterized protein LOC100881433 isoform 2
           [Megachile rotundata]
          Length = 392

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 9/78 (11%)

Query: 14  RYYETGSFKAGVIGGSKPKV---------ATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           R+YETGS + G IGGSK KV         AT  VV  I   K+E PTMFAWEIR++L  +
Sbjct: 60  RFYETGSIRPGSIGGSKTKVKLKLVLQQVATPTVVKKILRMKQEQPTMFAWEIREQLARQ 119

Query: 65  GICSQDNVPSVSSINRYI 82
           G C   ++PSVSS+NR +
Sbjct: 120 GACDPQSLPSVSSVNRIL 137


>gi|383863069|ref|XP_003707005.1| PREDICTED: paired box protein Pax-1-like [Megachile rotundata]
          Length = 375

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 33  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 87



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 87  RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 146

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 147 SVSSISRIL 155


>gi|285026408|ref|NP_001165520.1| paired-box transcription factor pax1 [Oryzias latipes]
 gi|254995975|dbj|BAH86769.1| paired-box transcription factor pax1 [Oryzias latipes]
          Length = 356

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|324508780|gb|ADY43703.1| Paired box protein Pax-6 [Ascaris suum]
          Length = 470

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 56/73 (76%), Gaps = 2/73 (2%)

Query: 10  LCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQ 69
           LC  RYYE+G+ +   IGGSKP+VAT  V D I SYKRE P++FAWEIRD+LL E +CS 
Sbjct: 61  LC--RYYESGTIRPRAIGGSKPRVATVNVCDKIESYKREQPSIFAWEIRDKLLNEKVCSA 118

Query: 70  DNVPSVSSINRYI 82
           D +PSVSSINR +
Sbjct: 119 DTIPSVSSINRVL 131



 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IV+LAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 9   HTGVNQLGGVFVNGRPLPDSTRQKIVDLAHQGARPCDISRILQVSNGCVSKILCR 63


>gi|32546|emb|CAA33146.1| unnamed protein product [Homo sapiens]
          Length = 212

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 71  AEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 129



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 129 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 188

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 189 SVSSISRIL 197


>gi|350409330|ref|XP_003488696.1| PREDICTED: hypothetical protein LOC100744058 [Bombus impatiens]
          Length = 388

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 119

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 120 PSVSSVNRIL 129


>gi|139001547|dbj|BAF51689.1| Pax6 [Dicyema acuticephalum]
 gi|139001549|dbj|BAF51690.1| Pax6 [Dicyema acuticephalum]
          Length = 408

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 2/84 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETG F+   IGGSKP+VAT  V+  IA YKRE P++FAWEIRDRLL   
Sbjct: 55  VSKILC--RYNETGCFEPRTIGGSKPRVATNHVIQYIAQYKRECPSIFAWEIRDRLLNNA 112

Query: 66  ICSQDNVPSVSSINRYITYVPIGH 89
           +C+Q+NVPS+SSINR +  +  G+
Sbjct: 113 VCTQENVPSISSINRVLRNLQTGN 136



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 51/75 (68%), Gaps = 9/75 (12%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRES 175
           S  H G NQLGG FVNGRPLP+  RQ I++LA++G R CDISR L+VS+GCVSKIL R  
Sbjct: 4   SNKHNGTNQLGGNFVNGRPLPNQTRQEIIKLAYSGARACDISRILQVSNGCVSKILCR-- 61

Query: 176 NLHNYRLVREEGCFE 190
                    E GCFE
Sbjct: 62  -------YNETGCFE 69


>gi|344279945|ref|XP_003411746.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1-like
           [Loxodonta africana]
          Length = 454

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 94  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 150



 Score = 85.9 bits (211), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G I GSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 150 RYNETGSILPGAIXGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 209

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 210 SVSSISRIL 218


>gi|340714700|ref|XP_003395864.1| PREDICTED: hypothetical protein LOC100647063 [Bombus terrestris]
          Length = 389

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQRIVQLALVGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 119

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 120 PSVSSVNRIL 129


>gi|115938112|ref|XP_800234.2| PREDICTED: paired box protein Pax-9-like [Strongylocentrotus
           purpuratus]
          Length = 437

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +  + HGG+NQLGG+F NGRPLP  +R RI+ELAH G+RPCDISRQL VSHGCVSKILSR
Sbjct: 1   MTHKGHGGINQLGGIFANGRPLPIHIRHRILELAHLGLRPCDISRQLLVSHGCVSKILSR 60



 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 56/69 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+ ETGS   G IGGSKP+V+T  VV+ IA YK+EN +MFAWEIR+RLL +GICS++ +P
Sbjct: 60  RFAETGSILPGAIGGSKPRVSTPAVVNRIAQYKQENSSMFAWEIRERLLLDGICSKETLP 119

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 120 SVSSINRIL 128


>gi|70570852|dbj|BAE06633.1| transcription factor protein [Ciona intestinalis]
          Length = 452

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 54/64 (84%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           +Q+    ++ G VNQLGGVFVNGRPLP+ +R RI+ELA  G+RPCDISRQLRVSHGCVSK
Sbjct: 24  KQKEFLDQTFGEVNQLGGVFVNGRPLPNALRLRIIELAQLGIRPCDISRQLRVSHGCVSK 83

Query: 170 ILSR 173
           IL+R
Sbjct: 84  ILAR 87



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ +C + NVP
Sbjct: 87  RYNETGSILPGAIGGSKPRVTTPGVVNAIKDYKVRDPGIFAWEIRDRLLSDAVCDKYNVP 146

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 147 SVSSISRILR---------NKIGNVLHPNNPL 169


>gi|47219534|emb|CAG09888.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 325

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 58



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 58  RYNETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVP 117

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 118 SVSSISRIL 126


>gi|431894118|gb|ELK03918.1| Paired box protein Pax-1 [Pteropus alecto]
          Length = 408

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 68  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 124



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 124 RYNETGSILPGAIGGSKPRVTTPNVVKHIRNYKQGDPGIFAWEIRDRLLADGVCDKYNVP 183

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 184 SVSSISRIL 192


>gi|71987648|ref|NP_001024570.1| Protein VAB-3, isoform a [Caenorhabditis elegans]
 gi|965066|gb|AAA82991.1| variable abnormal-3 [Caenorhabditis elegans]
 gi|6434263|emb|CAA90186.2| Protein VAB-3, isoform a [Caenorhabditis elegans]
 gi|1583405|prf||2120399A vab-3 gene
          Length = 455

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQRIV+LAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   HTGVNQLGGVFVNGRPLPDATRQRIVDLAHKGCRPCDISRLLQVSNGCVSKILCR 60



 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 58/73 (79%), Gaps = 2/73 (2%)

Query: 10  LCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQ 69
           LC  RYYE+G+ +   IGGSKP+VAT+ VV+ I  YKR+ P++FAWEIRD+LLA+ IC+ 
Sbjct: 58  LC--RYYESGTIRPRAIGGSKPRVATSDVVEKIEDYKRDQPSIFAWEIRDKLLADNICNN 115

Query: 70  DNVPSVSSINRYI 82
           + +PSVSSINR +
Sbjct: 116 ETIPSVSSINRVL 128


>gi|46575641|gb|AAH69134.1| Paired box 1 [Homo sapiens]
          Length = 440

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|51988872|gb|AAU21037.1| paired box gene 1 [Homo sapiens]
          Length = 438

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 1   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|119905393|ref|XP_617873.3| PREDICTED: paired box protein Pax-1 [Bos taurus]
          Length = 428

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 16  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 72



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 72  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 131

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 132 SVSSISRIL 140


>gi|110760215|ref|XP_001121954.1| PREDICTED: paired box protein Pax-1 [Apis mellifera]
          Length = 400

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 52  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 106



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 106 RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 165

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 166 SVSSISRIL 174


>gi|222530732|emb|CAU83353.1| Pax6 protein [Parasteatoda tepidariorum]
          Length = 210

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RYYETGS +   IGGSKP+VA   VV  IA +KRE P++FAWEIRDRLL+EG C+ D+VP
Sbjct: 27 RYYETGSIRPRAIGGSKPRVAAPDVVAKIAHFKRECPSIFAWEIRDRLLSEGACTNDSVP 86

Query: 74 SVSSINRYI 82
          SVSSINR +
Sbjct: 87 SVSSINRVL 95



 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/27 (77%), Positives = 24/27 (88%)

Query: 147 AHNGVRPCDISRQLRVSHGCVSKILSR 173
           AH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   AHSGARPCDISRILQVSNGCVSKILGR 27


>gi|158293611|ref|XP_314947.4| AGAP008818-PA [Anopheles gambiae str. PEST]
 gi|157016792|gb|EAA10320.4| AGAP008818-PA [Anopheles gambiae str. PEST]
          Length = 128

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD+VR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 2   QAGVNQLGGVFVNGRPLPDIVRRRIVELALMGVRPCDISRQLLVSHGCVSKILTR 56



 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I  +K+ENP MFAWEIRD+LL++ IC  + +
Sbjct: 56  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRFKQENPGMFAWEIRDQLLSQRICDPNTI 115

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 116 PSVSSVNRIL 125


>gi|388240430|dbj|BAM15709.1| paired box gene 1 [Scyliorhinus torazame]
          Length = 370

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 50/69 (72%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLL + +C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKYIREYKQGDPGIFAWEIRDRLLGDAVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|307209859|gb|EFN86638.1| Paired box pox-neuro protein [Harpegnathos saltator]
          Length = 403

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQRIV LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQRIVHLALGGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 7/87 (8%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K+E PTMFAWEIR++L  +G C   ++
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRMKQEQPTMFAWEIREQLARQGACDPQSL 119

Query: 73  PSVSSINRYI------TYVPIGHGGVN 93
           PSVSS+NR +      T +P   GG +
Sbjct: 120 PSVSSVNRILRGGGLHTDLPAIEGGTS 146


>gi|291388944|ref|XP_002711030.1| PREDICTED: paired box 9 [Oryctolagus cuniculus]
          Length = 391

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 34  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 90



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 90  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 149

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 150 SVSSISRIL 158


>gi|301775469|ref|XP_002923155.1| PREDICTED: paired box protein Pax-1-like [Ailuropoda melanoleuca]
          Length = 474

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 30  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 86



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 86  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 145

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 146 SVSSISRIL 154


>gi|350535905|ref|NP_001234889.1| pox-neuro [Nasonia vitripennis]
 gi|254733068|gb|ACT79979.1| pox-neuro [Nasonia vitripennis]
          Length = 380

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VRQ+IV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRQKIVQLALMGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 7/75 (9%)

Query: 14  RYYETGSFKAGVIGGSKPK------VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGIC 67
           R+YETGS + G IGGSK K      VAT  +V  I   K+ENPT+FAWEIR++L  EG C
Sbjct: 60  RFYETGSIRPGSIGGSKTKADCLQQVATPSIVKKILRMKQENPTIFAWEIREQLAREG-C 118

Query: 68  SQDNVPSVSSINRYI 82
              N+PSVSSINR +
Sbjct: 119 DPQNLPSVSSINRIL 133


>gi|345789851|ref|XP_542866.3| PREDICTED: paired box protein Pax-1 [Canis lupus familiaris]
          Length = 448

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 88  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 144



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 144 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 203

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 204 SVSSISRIL 212


>gi|197276660|ref|NP_032806.2| paired box protein Pax-1 [Mus musculus]
 gi|296439494|sp|P09084.4|PAX1_MOUSE RecName: Full=Paired box protein Pax-1
          Length = 446

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 88  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 144



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 144 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 203

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 204 SVSSISRIL 212


>gi|441640903|ref|XP_004090329.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Nomascus
           leucogenys]
          Length = 545

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 60/86 (69%), Gaps = 14/86 (16%)

Query: 88  GHGGVNQLGGVFVNGRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELA 147
           GH G  QL              R R +  +++G VNQLGGVFVNGRPLP+ +R RIVELA
Sbjct: 82  GHPGARQL-------------ARPRAM-EQTYGEVNQLGGVFVNGRPLPNAIRLRIVELA 127

Query: 148 HNGVRPCDISRQLRVSHGCVSKILSR 173
             G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 128 QLGIRPCDISRQLRVSHGCVSKILAR 153



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 153 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 212

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 213 SVSSISRIL 221


>gi|326677350|ref|XP_700877.5| PREDICTED: paired box protein Pax-1 [Danio rerio]
          Length = 338

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 5   QTYGEVNQLGGVFVNGRPLPNAIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 61



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV +I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 61  RYNETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 120

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 121 SVSSISRIL 129


>gi|340719313|ref|XP_003398099.1| PREDICTED: paired box protein Pax-1-like [Bombus terrestris]
          Length = 388

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 46  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 100



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 100 RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 159

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 160 SVSSISRIL 168


>gi|117650660|gb|ABK54274.1| Pax1/9 [Branchiostoma belcheri]
          Length = 363

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 62



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV AI  YK  +P +FAWEIRDRLLAEG+C + NVP
Sbjct: 62  RYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKYNVP 121

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 122 SVSSISRIL 130


>gi|351715916|gb|EHB18835.1| Paired box protein Pax-1 [Heterocephalus glaber]
          Length = 492

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 53/59 (89%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 27  SEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 85



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 85  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 144

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 145 SVSSISRIL 153


>gi|149408755|ref|XP_001506813.1| PREDICTED: paired box protein Pax-1-like [Ornithorhynchus anatinus]
          Length = 395

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 36  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 92



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 92  RYNETGSILPGAIGGSKPRVTTPTVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 151

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 152 SVSSISRIL 160


>gi|63028385|gb|AAY27074.1| Pax2/5/8b [Oikopleura dioica]
          Length = 292

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+ ETG  K GVIGGSKPKVAT  VV+ I  YK  NPTMFAWEIR +L+ + IC +DNVP
Sbjct: 58  RFEETGDIKPGVIGGSKPKVATPEVVNKITEYKHANPTMFAWEIRQQLIDDRICLKDNVP 117

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 118 SVSSINRIV 126



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 45/57 (78%), Gaps = 1/57 (1%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNG-VRPCDISRQLRVSHGCVSKILSR 173
           S  G+NQLGG +VNGRPL    R+ I+ LA  G VRPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   SSSGINQLGGNYVNGRPLALDTRREIIRLAKQGGVRPCDISRQLRVSHGCVSKILTR 58


>gi|395851971|ref|XP_003798520.1| PREDICTED: paired box protein Pax-1 [Otolemur garnettii]
          Length = 453

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 93  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 149



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 149 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 208

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 209 SVSSISRIL 217


>gi|388240436|dbj|BAM15712.1| paired box gene 9 [Scyliorhinus torazame]
          Length = 346

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRAYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|403283766|ref|XP_003933276.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-1 [Saimiri
           boliviensis boliviensis]
          Length = 539

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 110 QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 166



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 166 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 225

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 226 SVSSISRIL 234


>gi|350400844|ref|XP_003485982.1| PREDICTED: hypothetical protein LOC100741090 [Bombus impatiens]
          Length = 405

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 46  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 100



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 100 RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 159

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 160 SVSSISRIL 168


>gi|327259375|ref|XP_003214513.1| PREDICTED: paired box protein Pax-9-like [Anolis carolinensis]
          Length = 398

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 86  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 144



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 144 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 203

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 204 SVSSISRIL 212


>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
          Length = 481

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 54/69 (78%)

Query: 14 RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
          RY ETGS + GVIGGSKP+VAT  V   I  YKRENP++F+WEIRDRL+ EGIC + N P
Sbjct: 28 RYQETGSIRPGVIGGSKPRVATPEVEAKIEEYKRENPSVFSWEIRDRLVKEGICEKANAP 87

Query: 74 SVSSINRYI 82
          SVS+I+R I
Sbjct: 88 SVSAISRLI 96



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query: 146 LAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +A +GVRPC ISRQLRVSHGCVSKIL+R
Sbjct: 1   MAASGVRPCVISRQLRVSHGCVSKILNR 28


>gi|338747569|dbj|BAK41862.1| paired box protein [Eptatretus burgeri]
          Length = 365

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTFGEVNQLGGVFVNGRPLPNAIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+ I  YK+ +P +FAWEIRD+LLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVNHIREYKQRDPGIFAWEIRDKLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|301611748|ref|XP_002935394.1| PREDICTED: paired box protein Pax-9-like [Xenopus (Silurana)
           tropicalis]
          Length = 360

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|12005995|gb|AAG44703.1|AF266755_1 Pax9 [Takifugu rubripes]
          Length = 331

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G C + N+P
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGGCDKFNLP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|1709593|sp|P55166.1|PAX9_CHICK RecName: Full=Paired box protein Pax-9
 gi|1359591|emb|CAA63343.1| ChPax9 [Gallus gallus]
          Length = 339

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 4   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|88922928|sp|Q2VL56.1|PAX9_SAGOE RecName: Full=Paired box protein Pax-9
 gi|71727418|gb|AAZ39860.1| paired box 9 [Saguinus oedipus]
          Length = 341

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|9967369|dbj|BAB12396.1| paired box protein [Lethenteron camtschaticum]
          Length = 393

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S G VNQLGGVFVNGRPLP+ +R RIVE+A  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QSFGEVNQLGGVFVNGRPLPNAIRLRIVEMAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+ I +YK+ +P +FAWEIRD+LLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVNHIRTYKQRDPGIFAWEIRDKLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|350594704|ref|XP_003483955.1| PREDICTED: paired box protein Pax-1 [Sus scrofa]
          Length = 467

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 93  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 149



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 149 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 208

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 209 SVSSISRIL 217


>gi|4803852|emb|CAB42656.1| amphipax1 protein [Branchiostoma lanceolatum]
          Length = 330

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 62



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV AI  YK  +P +FAWEIRDRLLAEG+C + NVP
Sbjct: 62  RYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKYNVP 121

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 122 SVSSISRIL 130


>gi|410954451|ref|XP_003983878.1| PREDICTED: paired box protein Pax-1 [Felis catus]
          Length = 446

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 86  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 142



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 142 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 201

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 202 SVSSISRIL 210


>gi|291290909|ref|NP_001167485.1| paired box 9 [Xenopus laevis]
 gi|54037990|gb|AAH84222.1| Unknown (protein for MGC:80836) [Xenopus laevis]
 gi|393689248|gb|AFN10838.1| paired box transcription factor [Xenopus laevis]
          Length = 360

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|158053030|dbj|BAF81894.1| paired box protein 9 [Suncus murinus]
          Length = 377

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 36  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 94



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 94  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 153

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 154 SVSSISRIL 162


>gi|351712895|gb|EHB15814.1| Paired box protein Pax-9 [Heterocephalus glaber]
          Length = 383

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|348518373|ref|XP_003446706.1| PREDICTED: paired box protein Pax-1-like [Oreochromis niloticus]
          Length = 412

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/57 (82%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S+G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 61  QSYGEVNQLGGVFVNGRPLPNPVRLRIVELAQLGMRPCDISRQLRVSHGCVSKILAR 117



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV +I  YK+ +P +FAWEIRDRLL++G+C + NVP
Sbjct: 117 RYNETGSILPGAIGGSKPRVTTPAVVKSIRDYKQGDPGIFAWEIRDRLLSDGVCDKYNVP 176

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 177 SVSSISRIL 185


>gi|144369339|dbj|BAF56224.1| Pax-A [Coeloplana willeyi]
          Length = 560

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRESN 176
           GVNQLGG F NGRPLP+ +R+RIV+LAH GVRPCDISRQLRVSHGCVSKIL R S+
Sbjct: 81  GVNQLGGAFKNGRPLPEDIRKRIVDLAHFGVRPCDISRQLRVSHGCVSKILGRYSD 136



 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 52/69 (75%), Gaps = 1/69 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY +TGS   G IGGSKPKVAT  VV  I+ YKR NP+MFAWEIRDRLL +G+ S + VP
Sbjct: 133 RYSDTGSILPGNIGGSKPKVATPEVVAIISEYKRRNPSMFAWEIRDRLLMDGMPS-NKVP 191

Query: 74  SVSSINRYI 82
           S S+INR +
Sbjct: 192 SASTINRIL 200


>gi|194756382|ref|XP_001960458.1| GF13369 [Drosophila ananassae]
 gi|190621756|gb|EDV37280.1| GF13369 [Drosophila ananassae]
          Length = 444

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVELAVCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           RYYETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RYYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|4240092|dbj|BAA74830.1| unnamed protein product [Halocynthia roretzi]
          Length = 512

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 3/67 (4%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           +VVR      ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGC
Sbjct: 45  NVVRS---TEQTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGC 101

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 102 VSKILAR 108



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 108 RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 167

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 168 SVSSISRILR---------NKIGNVLHPHNPL 190


>gi|163915803|gb|AAI57673.1| pax1 protein [Xenopus (Silurana) tropicalis]
          Length = 415

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 61  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 117



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+ +C + NVP
Sbjct: 117 RYNETGSILPGAIGGSKPRVTTPNVVKHIREYKQSDPGIFAWEIRDRLLADNVCDKYNVP 176

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 177 SVSSISRIL 185


>gi|403263912|ref|XP_003924243.1| PREDICTED: paired box protein Pax-9 [Saimiri boliviensis
           boliviensis]
          Length = 341

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|321462349|gb|EFX73373.1| hypothetical protein DAPPUDRAFT_307722 [Daphnia pulex]
          Length = 160

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 9   YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 63



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLLA+GIC + NVP
Sbjct: 63  RYHETGSILPGAIGGSKPRVTTPKVVGYIKELKSKDPGIFAWEIRDRLLADGICDKYNVP 122

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 123 SVSSISRIL 131


>gi|449274775|gb|EMC83853.1| Paired box protein Pax-9, partial [Columba livia]
          Length = 345

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 5   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 58



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 58  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 117

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 118 SVSSISRIL 126


>gi|88922922|sp|Q2VL57.1|PAX9_LEORO RecName: Full=Paired box protein Pax-9
 gi|71727413|gb|AAZ39859.1| paired box 9 [Leontopithecus rosalia]
          Length = 341

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|441678373|ref|XP_003282443.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9, partial
           [Nomascus leucogenys]
          Length = 354

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 14  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 72



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 72  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 131

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 132 SVSSISRIL 140


>gi|70570847|dbj|BAE06632.1| transcription factor protein [Ciona intestinalis]
          Length = 457

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            ++++ G VNQLGGVFVNGRPLP+ +R RI+ELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 33  ASNQTFGEVNQLGGVFVNGRPLPNALRLRIIELAQLGIRPCDISRQLRVSHGCVSKILAR 92



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ +C + NVP
Sbjct: 92  RYNETGSILPGAIGGSKPRVTTPGVVNAIKDYKVRDPGIFAWEIRDRLLSDAVCDKYNVP 151

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 152 SVSSISRILR---------NKIGNVLHPNNPL 174


>gi|4240100|dbj|BAA74834.1| unnamed protein product [Halocynthia roretzi]
          Length = 374

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 3/67 (4%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           +VVR      ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGC
Sbjct: 45  NVVRS---TEQTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGC 101

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 102 VSKILAR 108



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 108 RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 167

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 168 SVSSISRILR---------NKIGNVLHPHNPL 190


>gi|395504281|ref|XP_003756484.1| PREDICTED: paired box protein Pax-9-like [Sarcophilus harrisii]
          Length = 353

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 13  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 71



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 71  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 130

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 131 SVSSISRIL 139


>gi|88922929|sp|Q2VL60.1|PAX9_SAIBB RecName: Full=Paired box protein Pax-9
 gi|71727398|gb|AAZ39856.1| paired box 9 [Saimiri boliviensis]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|196011682|ref|XP_002115704.1| hypothetical protein TRIADDRAFT_3502 [Trichoplax adhaerens]
 gi|190581480|gb|EDV21556.1| hypothetical protein TRIADDRAFT_3502, partial [Trichoplax
           adhaerens]
          Length = 249

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS + G IGGSKPKVAT  VV  I  +K ENP++FAWEIR++L+ E +C  + VP
Sbjct: 53  RYYETGSVRPGTIGGSKPKVATPTVVAKIEQFKHENPSIFAWEIREKLINEKVCKDETVP 112

Query: 74  SVSSINRYITYVPIGHGGVNQLG 96
           SVSSINR + +  I     + L 
Sbjct: 113 SVSSINRVLRHRAIEKAAASGLA 135



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 48/53 (90%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGGVF+NGRPLP+ +R RIV+LA NGVRPCDISR+L VSHGCVSKIL R
Sbjct: 1   GVNQLGGVFINGRPLPNYIRSRIVDLAKNGVRPCDISRRLLVSHGCVSKILGR 53


>gi|74096147|ref|NP_001027594.1| homeobox transcription factor Pax1/9 [Ciona intestinalis]
 gi|4240086|dbj|BAA74829.1| Pax1/9 [Ciona intestinalis]
          Length = 423

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 53/60 (88%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            ++++ G VNQLGGVFVNGRPLP+ +R RI+ELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 33  ASNQTFGEVNQLGGVFVNGRPLPNALRLRIIELAQLGIRPCDISRQLRVSHGCVSKILAR 92



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ +C + NVP
Sbjct: 92  RYNETGSILPGAIGGSKPRVTTPGVVNAIKDYKVRDPGIFAWEIRDRLLSDAVCDKYNVP 151

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 152 SVSSISRILR---------NKIGNVLHPNNPL 174


>gi|345803917|ref|XP_547776.3| PREDICTED: paired box protein Pax-9 [Canis lupus familiaris]
          Length = 524

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 183 AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 241



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 241 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 300

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 301 SVSSISRIL 309


>gi|195119272|ref|XP_002004155.1| GI19757 [Drosophila mojavensis]
 gi|193909223|gb|EDW08090.1| GI19757 [Drosophila mojavensis]
          Length = 462

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|18859213|ref|NP_571373.1| paired box protein Pax-9 [Danio rerio]
 gi|1648962|gb|AAC60034.1| Pax9a [Danio rerio]
          Length = 343

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|300797877|ref|NP_001179298.1| paired box protein Pax-9 [Bos taurus]
 gi|296475371|tpg|DAA17486.1| TPA: paired box 9-like [Bos taurus]
          Length = 342

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|301620213|ref|XP_002939483.1| PREDICTED: paired box protein Pax-1 [Xenopus (Silurana) tropicalis]
          Length = 426

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 72  QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 128



 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+ +C + NVP
Sbjct: 128 RYNETGSILPGAIGGSKPRVTTPNVVKHIREYKQSDPGIFAWEIRDRLLADNVCDKYNVP 187

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 188 SVSSISRIL 196


>gi|297694955|ref|XP_002824736.1| PREDICTED: paired box protein Pax-9 [Pongo abelii]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|91087631|ref|XP_973036.1| PREDICTED: similar to Pox neuro CG8246-PA [Tribolium castaneum]
 gi|270010968|gb|EFA07416.1| pox neuro [Tribolium castaneum]
          Length = 304

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/55 (85%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 10  QAGVNQLGGVFVNGRPLPDCVRRRIVELALLGVRPCDISRQLLVSHGCVSKILTR 64



 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I  +K+ENP MFAWEIR++L+A+ +C   N+
Sbjct: 64  RFYETGSIRPGSIGGSKTKQVATPTVVKKILRFKQENPGMFAWEIREQLIAQRVCEPHNI 123

Query: 73  PSVSSINRYI 82
           PSVSS+NR +
Sbjct: 124 PSVSSVNRIL 133


>gi|354499966|ref|XP_003512074.1| PREDICTED: paired box protein Pax-9 [Cricetulus griseus]
          Length = 342

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|194038753|ref|XP_001925237.1| PREDICTED: paired box protein Pax-9-like [Sus scrofa]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|410962066|ref|XP_003987596.1| PREDICTED: paired box protein Pax-9 [Felis catus]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|165979105|gb|ABY76998.1| Pax1/9 [Petromyzon marinus]
          Length = 393

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S G VNQLGGVFVNGRPLP+ +R RIVE+A  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QSFGEVNQLGGVFVNGRPLPNAIRLRIVEMARLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T   V+ I +YK+ +P +FAWEIRD+LLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNAVNHIRTYKQRDPGIFAWEIRDKLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|88922918|sp|Q2VL59.1|PAX9_CALGO RecName: Full=Paired box protein Pax-9
 gi|71727403|gb|AAZ39857.1| paired box 9 [Callimico goeldii]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|395838199|ref|XP_003792006.1| PREDICTED: paired box protein Pax-9 [Otolemur garnettii]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|281338832|gb|EFB14416.1| hypothetical protein PANDA_015018 [Ailuropoda melanoleuca]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 5   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 58



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 58  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 117

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 118 SVSSISRIL 126


>gi|348511099|ref|XP_003443082.1| PREDICTED: paired box protein Pax-9-like [Oreochromis niloticus]
          Length = 420

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 89  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 142



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 142 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 201

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 202 SVSSISRIL 210


>gi|296214837|ref|XP_002753875.1| PREDICTED: paired box protein Pax-9 [Callithrix jacchus]
 gi|88922919|sp|Q2VL58.1|PAX9_CALJA RecName: Full=Paired box protein Pax-9
 gi|71727408|gb|AAZ39858.1| paired box 9 [Callithrix jacchus]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|327315348|ref|NP_001035507.1| paired box protein Pax-9 [Macaca mulatta]
 gi|88922924|sp|Q2VL61.1|PAX9_MACMU RecName: Full=Paired box protein Pax-9
 gi|71727393|gb|AAZ39855.1| paired box 9 [Macaca mulatta]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|47221230|emb|CAG13166.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 490

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 134 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 187



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 187 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 246

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 247 SVSSISRIL 255


>gi|4240098|dbj|BAA74833.1| unnamed protein product [Halocynthia roretzi]
          Length = 502

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 3/67 (4%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           +VVR      ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGC
Sbjct: 45  NVVRS---TEQTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGC 101

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 102 VSKILAR 108



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 108 RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 167

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 168 SVSSISRILR---------NKIGNVLHPHNPL 190


>gi|190608782|gb|ACE79722.1| paired-box transcription factor 1/9 [Branchiostoma lanceolatum]
          Length = 281

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 62



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV AI  YK  +P +FAWEIRDRLLAEG+C + NVP
Sbjct: 62  RYNETGSILPGAIGGSKPRVTTPEVVKAIKKYKTLDPGIFAWEIRDRLLAEGVCDKYNVP 121

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 122 SVSSISRIL 130


>gi|7242167|ref|NP_006185.1| paired box protein Pax-9 [Homo sapiens]
 gi|426376723|ref|XP_004055141.1| PREDICTED: paired box protein Pax-9 [Gorilla gorilla gorilla]
 gi|8247954|sp|P55771.3|PAX9_HUMAN RecName: Full=Paired box protein Pax-9
 gi|4699896|emb|CAB41533.1| pax9 protein [Homo sapiens]
 gi|12654643|gb|AAH01159.1| Paired box 9 [Homo sapiens]
 gi|87080656|dbj|BAE79273.1| paired box protein 9 [Homo sapiens]
 gi|119586257|gb|EAW65853.1| paired box gene 9 [Homo sapiens]
 gi|157928432|gb|ABW03512.1| paired box 9 [synthetic construct]
 gi|157929080|gb|ABW03825.1| paired box 9 [synthetic construct]
 gi|208966988|dbj|BAG73508.1| paired box 9 [synthetic construct]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|56714083|gb|AAW24012.1| homeodomain protein Pax258 [Oikopleura dioica]
          Length = 294

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+ ETG  K GVIGGSKPKVAT  VV+ I  YK  NPTMFAWEIR +L+ + +C +DNVP
Sbjct: 58  RFEETGDIKPGVIGGSKPKVATPEVVNKITEYKHANPTMFAWEIRQQLIDDRVCLKDNVP 117

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 118 SVSSINRIV 126



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 45/57 (78%), Gaps = 1/57 (1%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNG-VRPCDISRQLRVSHGCVSKILSR 173
           S  G+NQLGG +VNGRPL    R+ I+ LA  G VRPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   SSSGINQLGGNYVNGRPLALDTRKEIIRLAKQGGVRPCDISRQLRVSHGCVSKILTR 58


>gi|193800|gb|AAA37793.1| Pax 1 protein precursor, partial [Mus musculus]
          Length = 140

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/62 (75%), Positives = 52/62 (83%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           R V    HG VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSK+L
Sbjct: 5   RRVCRAEHGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKML 64

Query: 172 SR 173
           +R
Sbjct: 65  AR 66



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 66  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 125

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 126 SVSSISRIL 134


>gi|405974968|gb|EKC39574.1| Paired box protein Pax-9 [Crassostrea gigas]
          Length = 281

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  GVRPCDISRQLRVSHGCVSKIL+R
Sbjct: 11  TFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGVRPCDISRQLRVSHGCVSKILAR 66



 Score = 89.0 bits (219), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 8/89 (8%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK  +P +FAWEIRD+LLA+G+C + NVP
Sbjct: 66  RYNETGSILPGAIGGSKPRVTTPNVVKHIKMYKERDPGIFAWEIRDKLLADGVCDKYNVP 125

Query: 74  SVSSINRYI--------TYVPIGHGGVNQ 94
           SVSSI+R +        T  PI  G  N+
Sbjct: 126 SVSSISRILRNKIGNNPTPTPISQGYDNK 154


>gi|397523636|ref|XP_003831830.1| PREDICTED: paired box protein Pax-9 [Pan paniscus]
 gi|88922925|sp|Q2VL62.1|PAX9_PANTR RecName: Full=Paired box protein Pax-9
 gi|71727388|gb|AAZ39854.1| paired box 9 [Pan troglodytes verus]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|324521878|gb|ADY47945.1| Paired box protein Pax-9 [Ascaris suum]
          Length = 179

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           S G +NQLGGVFVNGRPLP  +R +IVELAH+GVRPCDISRQLR+SHGCVSKIL+R
Sbjct: 38  SCGEMNQLGGVFVNGRPLPITLRMKIVELAHHGVRPCDISRQLRISHGCVSKILNR 93



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY E+G+   G IGGSKP+V T  VV  I   K  +P MFAWEIRDRL+ + IC + NVP
Sbjct: 93  RYTESGTIMPGAIGGSKPRVTTPKVVHHIRILKSRDPGMFAWEIRDRLIQDNICDKYNVP 152

Query: 74  SVSSINRYI-TYVPIG 88
           SVSSI+R + T  P+ 
Sbjct: 153 SVSSISRILRTRAPLA 168


>gi|147899324|ref|NP_001090451.1| paired box 1 [Xenopus laevis]
 gi|110270583|gb|ABG57077.1| paired box protein 1 [Xenopus laevis]
 gi|393689246|gb|AFN10837.1| paired box transcription factor [Xenopus laevis]
          Length = 358

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QNYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+ +C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRDYKQGDPGIFAWEIRDRLLADNVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|88014534|ref|NP_001034628.1| paired box protein Pax-9 [Rattus norvegicus]
 gi|109892814|sp|Q2L4T2.1|PAX9_RAT RecName: Full=Paired box protein Pax-9
 gi|87080654|dbj|BAE79272.1| paired box protein 9 [Rattus norvegicus]
 gi|149051272|gb|EDM03445.1| rCG62149 [Rattus norvegicus]
          Length = 342

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|417399256|gb|JAA46653.1| Putative transcription factor pax1/9 [Desmodus rotundus]
          Length = 342

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|402875985|ref|XP_003901767.1| PREDICTED: paired box protein Pax-9 [Papio anubis]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|334310817|ref|XP_001366875.2| PREDICTED: paired box protein Pax-9-like [Monodelphis domestica]
          Length = 444

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 108 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 161



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 161 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 220

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 221 SVSSISRIL 229


>gi|4240094|dbj|BAA74831.1| unnamed protein product [Halocynthia roretzi]
          Length = 475

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 15  QTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 71



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 71  RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 130

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 131 SVSSISRILR---------NKIGNVLHPHNPL 153


>gi|88922926|sp|Q2VL54.1|PAX9_PERPO RecName: Full=Paired box protein Pax-9
 gi|71727428|gb|AAZ39862.1| paired box 9 [Perodicticus potto]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|88922920|sp|Q2VL53.1|PAX9_DAUMA RecName: Full=Paired box protein Pax-9
 gi|88922921|sp|Q2VL52.1|PAX9_LEMCA RecName: Full=Paired box protein Pax-9
 gi|88922923|sp|Q2VL51.1|PAX9_LEPED RecName: Full=Paired box protein Pax-9
 gi|71727433|gb|AAZ39863.1| paired box 9 [Daubentonia madagascariensis]
 gi|71727438|gb|AAZ39864.1| paired box 9 [Lemur catta]
 gi|71727443|gb|AAZ39865.1| paired box 9 [Lepilemur edwardsi]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|22535488|dbj|BAC10688.1| Pax1 [Mus musculus]
          Length = 212

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|4240096|dbj|BAA74832.1| unnamed protein product [Halocynthia roretzi]
          Length = 503

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 3/67 (4%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           +VVR      ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGC
Sbjct: 45  NVVRS---TEQTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGC 101

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 102 VSKILAR 108



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 108 RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 167

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 168 SVSSISRILR---------NKIGNVLHPHNPL 190


>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
 gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
          Length = 509

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK +T P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQSTTPDVEKKIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           GIC ++NVPSVSSI+R +
Sbjct: 141 GICDRNNVPSVSSISRML 158



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|1195494|gb|AAB35064.1| Pax-1 product=sclerotome development regulator/DNA-binding
           transcriptional activator [Coturnix coturnix=Japanese
           quails, ssp. japonica, Peptide, 353 aa]
          Length = 353

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            ++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   HTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 3/93 (3%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPLP 106
           SVSSI+R +       G ++Q GG +  G+  P
Sbjct: 119 SVSSISRILRNK---IGSLSQPGGPYDGGKQPP 148


>gi|410897669|ref|XP_003962321.1| PREDICTED: paired box protein Pax-9-like [Takifugu rubripes]
          Length = 393

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 68  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 121



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 121 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 180

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 181 SVSSISRIL 189


>gi|26330346|dbj|BAC28903.1| unnamed protein product [Mus musculus]
          Length = 342

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKNIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|321400078|ref|NP_001189460.1| twin of eyeless [Bombyx mori]
 gi|304421458|gb|ADM32528.1| pak6 [Bombyx mori]
          Length = 183

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 52/66 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS K   IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+E +C+ DN+P
Sbjct: 73  RYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSENVCNNDNIP 132

Query: 74  SVSSIN 79
           S   I+
Sbjct: 133 SSHIID 138



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +S  H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 15  SSAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 73


>gi|88922927|sp|Q2VL50.1|PAX9_PROVC RecName: Full=Paired box protein Pax-9
 gi|71727448|gb|AAZ39866.1| paired box 9 [Propithecus coquereli]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|6754992|ref|NP_035171.1| paired box protein Pax-9 [Mus musculus]
 gi|1352722|sp|P47242.1|PAX9_MOUSE RecName: Full=Paired box protein Pax-9
 gi|886893|emb|CAA58824.1| transcription factor [Mus musculus]
 gi|13543255|gb|AAH05794.1| Paired box gene 9 [Mus musculus]
 gi|74208760|dbj|BAE21149.1| unnamed protein product [Mus musculus]
          Length = 342

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|189069355|dbj|BAG36387.1| unnamed protein product [Homo sapiens]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|260818045|ref|XP_002603895.1| hypothetical protein BRAFLDRAFT_241998 [Branchiostoma floridae]
 gi|229289219|gb|EEN59906.1| hypothetical protein BRAFLDRAFT_241998 [Branchiostoma floridae]
          Length = 134

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 57/73 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETG+ + G IGGS+PKVAT  VV  I  YK E P+MFAWEIR+RLLA+ +C++ N+P
Sbjct: 56  RYFETGTVRPGSIGGSRPKVATPLVVRKILGYKLEKPSMFAWEIRERLLADRVCTEGNLP 115

Query: 74  SVSSINRYITYVP 86
           SVSSINR +  +P
Sbjct: 116 SVSSINRILRTLP 128



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 47/53 (88%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G+NQLGG+FVNGRPLPD VR+ IV LA  GVRPCDISR+L VSHGCVSKILSR
Sbjct: 4   GINQLGGIFVNGRPLPDHVRRYIVHLALMGVRPCDISRRLLVSHGCVSKILSR 56


>gi|426248838|ref|XP_004018165.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9 [Ovis
           aries]
          Length = 669

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 330 AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 388



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 388 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 447

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 448 SVSSISRIL 456


>gi|71727423|gb|AAZ39861.1| paired box 9, partial [Tarsius syrichta]
          Length = 341

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|4996232|dbj|BAA78380.1| Pax1/9 [Ptychodera flava]
          Length = 383

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 7   QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 63



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+ I  YK+ +P +FAWEIRDRL+A+G+C + NVP
Sbjct: 63  RYNETGSILPGAIGGSKPRVTTPTVVNHIKEYKQHDPGIFAWEIRDRLMADGVCDKYNVP 122

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 123 SVSSISRIL 131


>gi|410048181|ref|XP_001143345.2| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9 isoform 4
           [Pan troglodytes]
          Length = 408

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 68  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 126



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 126 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 185

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 186 SVSSISRIL 194


>gi|390349385|ref|XP_779972.3| PREDICTED: paired box protein Pax-6-like [Strongylocentrotus
           purpuratus]
          Length = 461

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R YE    ++G IGGSKPKVAT  VV+ I SYK ENPT+FAWEIRD+L+A+G+C+   VP
Sbjct: 61  RLYEPTPTRSGAIGGSKPKVATPAVVEKIESYKHENPTIFAWEIRDKLVADGVCTTSTVP 120

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 121 SVSSINRIL 129


>gi|4240102|dbj|BAA74835.1| unnamed protein product [Halocynthia roretzi]
          Length = 503

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 3/67 (4%)

Query: 107 DVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGC 166
           +VVR      ++ G VNQLGG+FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGC
Sbjct: 45  NVVRS---TEQTFGEVNQLGGIFVNGRPLPNTIRLRIVELAQLGIRPCDISRQLRVSHGC 101

Query: 167 VSKILSR 173
           VSKIL+R
Sbjct: 102 VSKILAR 108



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 9/92 (9%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV+AI  YK  +P +FAWEIRDRLL++ IC + NVP
Sbjct: 108 RYNETGSILPGAIGGSKPRVTTPSVVNAIKDYKIRDPGIFAWEIRDRLLSDCICDKYNVP 167

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPL 105
           SVSSI+R +          N++G V     PL
Sbjct: 168 SVSSISRILR---------NKIGNVLHPHNPL 190


>gi|355778530|gb|EHH63566.1| hypothetical protein EGM_16559 [Macaca fascicularis]
          Length = 371

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           V   + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 29  VVKPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 88



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 88  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 147

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 148 SVSSISRIL 156


>gi|149410397|ref|XP_001511262.1| PREDICTED: paired box protein Pax-9-like [Ornithorhynchus anatinus]
          Length = 349

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 16  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 69



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 69  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 128

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 129 SVSSISRIL 137


>gi|355693229|gb|EHH27832.1| hypothetical protein EGK_18127 [Macaca mulatta]
          Length = 371

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/60 (76%), Positives = 51/60 (85%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           V   + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 29  VVKPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 88



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 88  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 147

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 148 SVSSISRIL 156


>gi|440909271|gb|ELR59195.1| Paired box protein Pax-9, partial [Bos grunniens mutus]
          Length = 335

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 5   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 58



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 58  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 117

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 118 SVSSISRIL 126


>gi|402582100|gb|EJW76046.1| hypothetical protein WUBG_13045 [Wuchereria bancrofti]
          Length = 130

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 51/62 (82%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           ++V    H GVNQLGGVFVNGRPLPD  RQ+IV+LAH G RPCDISR L+VS+GCVSKIL
Sbjct: 2   KLVVDSGHTGVNQLGGVFVNGRPLPDSTRQKIVDLAHQGARPCDISRILQVSNGCVSKIL 61

Query: 172 SR 173
            R
Sbjct: 62  CR 63



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT  V D I SYKRE P++FAWEIRD+LL E 
Sbjct: 57  VSKILC--RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEK 114

Query: 66  ICSQDNVPSVS 76
           +CS D +PSVS
Sbjct: 115 VCSPDTIPSVS 125


>gi|148704760|gb|EDL36707.1| paired box gene 9, isoform CRA_b [Mus musculus]
          Length = 394

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A  + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 53  AEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 111



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 111 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 170

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 171 SVSSISRIL 179


>gi|240995600|ref|XP_002404626.1| paired box protein pax2.1, putative [Ixodes scapularis]
 gi|215491628|gb|EEC01269.1| paired box protein pax2.1, putative [Ixodes scapularis]
          Length = 169

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 52/60 (86%)

Query: 114 VASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++    G+NQLGGVFVNGRPLPD +R+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   ISNFGQAGINQLGGVFVNGRPLPDYIRRRIVELALMGVRPCDISRQLLVSHGCVSKILTR 65



 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/21 (80%), Positives = 18/21 (85%)

Query: 14 RYYETGSFKAGVIGGSKPKVA 34
          R+YETGS K G IGGSKPKVA
Sbjct: 65 RFYETGSIKPGSIGGSKPKVA 85


>gi|148704759|gb|EDL36706.1| paired box gene 9, isoform CRA_a [Mus musculus]
          Length = 364

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 28  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 81



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 81  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 140

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 141 SVSSISRIL 149


>gi|338727409|ref|XP_001918200.2| PREDICTED: paired box protein Pax-6 [Equus caballus]
          Length = 395

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 56/84 (66%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 73  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 132

Query: 74  SVSSINRYITYVPIGHGGVNQLGG 97
           S      +       HG   Q GG
Sbjct: 133 SGGDHGNFPVSDGNHHGCQQQEGG 156



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 50/70 (71%), Gaps = 14/70 (20%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR--------------VS 163
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+              VS
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQNVS 63

Query: 164 HGCVSKILSR 173
           +GCVSKIL R
Sbjct: 64  NGCVSKILGR 73


>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
          Length = 445

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 59/78 (75%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK +T P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQSTTPDVEKKIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           GIC ++NVPSVSSI+R +
Sbjct: 141 GICDRNNVPSVSSISRML 158



 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|444722473|gb|ELW63165.1| Paired box protein Pax-9 [Tupaia chinensis]
          Length = 356

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 58  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 111



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 111 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 170

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 171 SVSSISRIL 179


>gi|345495879|ref|XP_003427588.1| PREDICTED: paired box protein Pax-1-like [Nasonia vitripennis]
          Length = 280

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 36  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 90



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 90  RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKHKDPGIFAWEIRDRLLSDGVCDKYNVP 149

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 150 SVSSISRIL 158


>gi|432119746|gb|ELK38626.1| Paired box protein Pax-9 [Myotis davidii]
          Length = 390

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 18  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 71



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 71  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 130

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 131 SVSSISRIL 139


>gi|390349966|ref|XP_003727317.1| PREDICTED: paired box protein Pax-6-like isoform 1
           [Strongylocentrotus purpuratus]
          Length = 145

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 50/57 (87%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + H GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 27  KGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 83



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/63 (71%), Positives = 52/63 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLLAE IC+Q+N+P
Sbjct: 83  RYYETGSIRPRAIGGSKPRVATPHVVTRIAHYKRECPSIFAWEIRDRLLAEKICNQENIP 142

Query: 74  SVS 76
           SVS
Sbjct: 143 SVS 145


>gi|195401372|ref|XP_002059287.1| GJ18164 [Drosophila virilis]
 gi|194142293|gb|EDW58699.1| GJ18164 [Drosophila virilis]
          Length = 440

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|301780168|ref|XP_002925501.1| PREDICTED: paired box protein Pax-9-like [Ailuropoda melanoleuca]
          Length = 457

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 121 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 174



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 174 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 233

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 234 SVSSISRIL 242


>gi|431907339|gb|ELK11312.1| Paired box protein Pax-9 [Pteropus alecto]
          Length = 401

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 65  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 118



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 118 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 177

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 178 SVSSISRIL 186


>gi|170588517|ref|XP_001899020.1| vab-3 gene. [Brugia malayi]
 gi|158593233|gb|EDP31828.1| vab-3 gene., putative [Brugia malayi]
          Length = 153

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/62 (70%), Positives = 51/62 (82%)

Query: 112 RIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKIL 171
           +++    H GVNQLGGVFVNGRPLPD  RQ+IV+LAH G RPCDISR L+VS+GCVSKIL
Sbjct: 2   KLIVDSGHTGVNQLGGVFVNGRPLPDSTRQKIVDLAHQGARPCDISRILQVSNGCVSKIL 61

Query: 172 SR 173
            R
Sbjct: 62  CR 63



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT  V D I SYKRE P++FAWEIRD+LL E 
Sbjct: 57  VSKILC--RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEK 114

Query: 66  ICSQDNVPS 74
           +CS D +PS
Sbjct: 115 VCSPDTIPS 123


>gi|242006165|ref|XP_002423925.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
 gi|212507188|gb|EEB11187.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
          Length = 509

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 75  HSGINQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 129



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 25  VIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPSVSSINRYI 82
            IGGSKP+VAT PVV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+PSVSSINR +
Sbjct: 130 AIGGSKPRVATTPVVSKIADYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVL 187


>gi|195391788|ref|XP_002054542.1| GJ22751 [Drosophila virilis]
 gi|194152628|gb|EDW68062.1| GJ22751 [Drosophila virilis]
          Length = 462

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 133 YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 187



 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 8/91 (8%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 187 RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 246

Query: 74  SVSSINRYI--------TYVPIGHGGVNQLG 96
           SVSSI+R +         +   G+GG   LG
Sbjct: 247 SVSSISRILRNKLGSIGHHHSAGNGGSASLG 277


>gi|256089539|ref|XP_002580857.1| paired box protein pax-6 [Schistosoma mansoni]
          Length = 122

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG+FVNGRPLPD  RQRI+ELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   HSGVNQLGGMFVNGRPLPDTTRQRIIELAHSGARPCDISRILQVSNGCVSKILCR 55



 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 2/71 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYETGS +   IGGSKP+VAT  VV  I  YKRE P++FAWEIRDRLL EG
Sbjct: 49  VSKILC--RYYETGSIRPKAIGGSKPRVATNAVVTKIDIYKRECPSIFAWEIRDRLLQEG 106

Query: 66  ICSQDNVPSVS 76
           +C+ DN+PSVS
Sbjct: 107 VCTPDNIPSVS 117


>gi|22535486|dbj|BAC10687.1| Pax1 [Mus musculus]
          Length = 88

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 52/57 (91%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59


>gi|312382242|gb|EFR27765.1| hypothetical protein AND_05156 [Anopheles darlingi]
          Length = 439

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 51/58 (87%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 80  AQQYGEVNQLGGVFVNGRPLPNSTRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 137



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K+++P +FAWEIRDRLL++G+C ++NVP
Sbjct: 137 RYHETGSILPGAIGGSKPRVTTPKVVTYIRELKQKDPGIFAWEIRDRLLSDGVCDKNNVP 196

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 197 SVSSISRIL 205


>gi|195144822|ref|XP_002013395.1| GL24118 [Drosophila persimilis]
 gi|194102338|gb|EDW24381.1| GL24118 [Drosophila persimilis]
          Length = 229

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 36  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 90



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 90  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 149

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 150 SVSSISRIL 158


>gi|155008492|gb|ABS89283.1| paired-box protein 1, partial [Trachemys scripta]
          Length = 111

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 52/58 (89%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            +++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   EQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/53 (62%), Positives = 39/53 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGI 66
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGV 111


>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
          Length = 213

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V   I SYKR+NP++F+WE+RDRL+ EGIC +   P
Sbjct: 55  RYQETGSIRPGVIGGSKPRVATPEVESKIESYKRDNPSIFSWEVRDRLIKEGICDRTTAP 114

Query: 74  SVSSINRYI 82
           SVS+I+R I
Sbjct: 115 SVSAISRLI 123



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  GVRPC ISR LRVSHGCVSKIL+R
Sbjct: 1   QGRVNQLGGVFINGRPLPNHIRLKIVEMAAQGVRPCVISRNLRVSHGCVSKILNR 55


>gi|348572327|ref|XP_003471944.1| PREDICTED: paired box protein Pax-9-like [Cavia porcellus]
          Length = 425

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 59  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 112



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 112 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 171

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 172 SVSSISRIL 180


>gi|347976434|ref|XP_001689344.2| AGAP001493-PA [Anopheles gambiae str. PEST]
 gi|333467323|gb|EGK96529.1| AGAP001493-PA [Anopheles gambiae str. PEST]
          Length = 387

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 51/58 (87%)

Query: 116 SRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 36  AQQYGEVNQLGGVFVNGRPLPNSTRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 93



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K+++P +FAWEIRDRLL++G+C ++NVP
Sbjct: 93  RYHETGSILPGAIGGSKPRVTTPKVVTYIRELKQKDPGIFAWEIRDRLLSDGVCDKNNVP 152

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 153 SVSSISRIL 161


>gi|344253603|gb|EGW09707.1| Paired box protein Pax-9 [Cricetulus griseus]
          Length = 316

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|165881968|gb|ABY71250.1| Pax1/9b [Petromyzon marinus]
          Length = 323

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 52/59 (88%)

Query: 115 ASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           A +S G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 61  ADQSFGEVNQLGGVFVNGRPLPNPIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 119



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 119 RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQRDPGIFAWEIRDRLLADGVCDKYNVP 178

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 179 SVSSISRIL 187


>gi|313233090|emb|CBY24201.1| unnamed protein product [Oikopleura dioica]
          Length = 124

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/67 (67%), Positives = 52/67 (77%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           R+ ETG  K GVIGGSKPKVAT  VV+ I  YK  NPTMFAWEIR +L+ + +C +DNVP
Sbjct: 58  RFEETGDIKPGVIGGSKPKVATPEVVNKITEYKHANPTMFAWEIRQQLIDDRVCLKDNVP 117

Query: 74  SVSSINR 80
           SVSSINR
Sbjct: 118 SVSSINR 124



 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 45/57 (78%), Gaps = 1/57 (1%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELA-HNGVRPCDISRQLRVSHGCVSKILSR 173
           S  G+NQLGG +VNGRPL    R+ I+ LA   GVRPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   SSSGINQLGGNYVNGRPLALDTRKEIIRLAKQGGVRPCDISRQLRVSHGCVSKILTR 58


>gi|390349162|ref|XP_003727157.1| PREDICTED: paired box protein Pax-1-like [Strongylocentrotus
           purpuratus]
          Length = 229

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++ G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 11  QTFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 67



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRD+LLAEG+C + NVP
Sbjct: 67  RYNETGSILPGAIGGSKPRVTTPNVVKKIREYKQRDPGIFAWEIRDKLLAEGVCDKYNVP 126

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 127 SVSSISRIL 135


>gi|195429367|ref|XP_002062734.1| GK19611 [Drosophila willistoni]
 gi|194158819|gb|EDW73720.1| GK19611 [Drosophila willistoni]
          Length = 481

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|7595813|gb|AAF64461.1|AF241311_1 transcription factor PaxD [Acropora millepora]
          Length = 342

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP ++R +I+ELA  GVRPCDISRQLRVSHGCVSKIL R
Sbjct: 9   QGKVNQLGGVFINGRPLPKLLRWKIIELAQMGVRPCDISRQLRVSHGCVSKILCR 63



 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETG+   G++G ++P+  T  + + I  +++EN  +F+WE+RDRLL E 
Sbjct: 57  VSKILC--RYQETGTVDPGIVGLNRPRDVTPEIENKIDQFRKENSGIFSWEVRDRLLREN 114

Query: 66  ICSQDNVPSVSSINRYI 82
           ICS+  VPS+ +I++ +
Sbjct: 115 ICSKSTVPSLGAISQIL 131


>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
          Length = 988

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V   I SYKR+NP++F+WE+RDRL+ EGIC +   P
Sbjct: 531 RYQETGSIRPGVIGGSKPRVATPEVESKIESYKRDNPSIFSWEVRDRLIKEGICDRTTAP 590

Query: 74  SVSSINRYI 82
           SVS+I+R I
Sbjct: 591 SVSAISRLI 599



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  GVRPC ISR LRVSHGCVSKIL+R
Sbjct: 477 QGRVNQLGGVFINGRPLPNHIRLKIVEMAAQGVRPCVISRNLRVSHGCVSKILNR 531


>gi|347963087|ref|XP_566364.4| AGAP000063-PA [Anopheles gambiae str. PEST]
 gi|333467366|gb|EAL41300.4| AGAP000063-PA [Anopheles gambiae str. PEST]
          Length = 564

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGG+FV GRPLPD  RQRIVELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 8   HSGVNQLGGIFVGGRPLPDSTRQRIVELAHAGARPCDISRILQVSNGCVSKILGR 62



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ I+ +K   P +FAWEIRD+LL E IC+ +N+P
Sbjct: 62  RYYETGSIRPRAIGGSKPRVATPEVVNKISQFKNNCPNIFAWEIRDKLLNERICTPENIP 121

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 122 SVSSINRVL 130


>gi|157128224|ref|XP_001661352.1| paired box protein pax-6 [Aedes aegypti]
 gi|108882239|gb|EAT46464.1| AAEL002321-PA [Aedes aegypti]
          Length = 537

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H G+NQLGGVFV GRPLPD  RQRIVELAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 8   HSGINQLGGVFVGGRPLPDSTRQRIVELAHAGARPCDISRILQVSNGCVSKILGR 62



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV+ I+ +K+  P +FAWEIRD+LL E IC+ +N+P
Sbjct: 62  RYYETGSIRPRAIGGSKPRVATPEVVNRISMFKQNCPNIFAWEIRDKLLNERICTPENIP 121

Query: 74  SVSSINRYI 82
           SVSSINR +
Sbjct: 122 SVSSINRVL 130


>gi|1352718|sp|P47236.1|PAX1_CHICK RecName: Full=Paired box protein Pax-1
 gi|773403|gb|AAA65058.1| Pax-1, partial [Gallus gallus]
          Length = 203

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   TYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 58



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 62/93 (66%), Gaps = 3/93 (3%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 58  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVP 117

Query: 74  SVSSINRYITYVPIGHGGVNQLGGVFVNGRPLP 106
           SVSSI+R +       G ++Q GG +  G+  P
Sbjct: 118 SVSSISRILRNK---IGSLSQPGGPYDGGKQPP 147


>gi|195110951|ref|XP_002000043.1| GI22750 [Drosophila mojavensis]
 gi|193916637|gb|EDW15504.1| GI22750 [Drosophila mojavensis]
          Length = 377

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 46  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 100



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 100 RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 159

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 160 SVSSISRIL 168


>gi|446398|prf||1911404B PAX-9 gene
          Length = 208

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+  + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVGDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|308494689|ref|XP_003109533.1| CRE-VAB-3 protein [Caenorhabditis remanei]
 gi|308245723|gb|EFO89675.1| CRE-VAB-3 protein [Caenorhabditis remanei]
          Length = 462

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT+ VV+ I  YKR+ P++FAWEIRD+LL++ 
Sbjct: 54  VSKILC--RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDN 111

Query: 66  ICSQDNVPSVSSINRYI 82
           IC+ + +PSVSSINR +
Sbjct: 112 ICNNETIPSVSSINRVL 128



 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IV LAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 6   HTGVNQLGGVFVNGRPLPDATRQKIVTLAHQGRRPCDISRILQVSNGCVSKILCR 60


>gi|328704750|ref|XP_003242591.1| PREDICTED: hypothetical protein LOC100164585 [Acyrthosiphon pisum]
          Length = 639

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 193 YGEVNQLGGVFVNGRPLPNAVRVRIVELARVGIRPCDISRQLRVSHGCVSKILAR 247



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 5/94 (5%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   KR++P +FAWEIRDRLLA+G+C + NVP
Sbjct: 247 RYHETGSVLPGAIGGSKPRVTTPRVVAYIGRLKRKDPGVFAWEIRDRLLADGVCDKFNVP 306

Query: 74  SVSSINRYI-----TYVPIGHGGVNQLGGVFVNG 102
           SVSSI+R +     +  P    G  Q   V   G
Sbjct: 307 SVSSISRILRNKIGSTGPTQSTGTQQPAAVMTGG 340


>gi|198461655|ref|XP_001362079.2| GA20926 [Drosophila pseudoobscura pseudoobscura]
 gi|198137410|gb|EAL26659.2| GA20926 [Drosophila pseudoobscura pseudoobscura]
          Length = 469

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|268578283|ref|XP_002644124.1| Hypothetical protein CBG04481 [Caenorhabditis briggsae]
          Length = 364

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/61 (72%), Positives = 49/61 (80%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           ++    H GVNQLGGVFVNGRPLPD  RQ+IV LAH G RPCDISR L+VS+GCVSKIL 
Sbjct: 57  VLTDAGHTGVNQLGGVFVNGRPLPDATRQKIVALAHQGRRPCDISRLLQVSNGCVSKILC 116

Query: 173 R 173
           R
Sbjct: 117 R 117



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT+ VV+ I  YKR+ P++FAWEIRD+LL++ 
Sbjct: 111 VSKILC--RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDN 168

Query: 66  ICSQDNVPSVSSINRYI 82
           IC+ + +PSVSSINR +
Sbjct: 169 ICNNETIPSVSSINRVL 185


>gi|195171757|ref|XP_002026670.1| GL11851 [Drosophila persimilis]
 gi|194111596|gb|EDW33639.1| GL11851 [Drosophila persimilis]
          Length = 470

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|71727359|gb|AAZ39841.1| paired box 9, partial [Pan paniscus]
 gi|71727361|gb|AAZ39842.1| paired box 9, partial [Gorilla gorilla gorilla]
 gi|71727363|gb|AAZ39843.1| paired box 9, partial [Pongo abelii]
 gi|71727365|gb|AAZ39844.1| paired box 9, partial [Symphalangus syndactylus]
 gi|71727367|gb|AAZ39845.1| paired box 9, partial [Mandrillus leucophaeus]
 gi|71727371|gb|AAZ39847.1| paired box 9, partial [Cercopithecus cephus]
 gi|313506878|gb|ADR64954.1| paired box 9 [Homo sapiens]
 gi|313506880|gb|ADR64955.1| paired box 9 [Homo sapiens]
 gi|313506882|gb|ADR64956.1| paired box 9 [Homo sapiens]
 gi|313506884|gb|ADR64957.1| paired box 9 [Homo sapiens]
 gi|313506886|gb|ADR64958.1| paired box 9 [Homo sapiens]
 gi|313506888|gb|ADR64959.1| paired box 9 [Homo sapiens]
 gi|313506890|gb|ADR64960.1| paired box 9 [Homo sapiens]
 gi|313506892|gb|ADR64961.1| paired box 9 [Homo sapiens]
 gi|313506894|gb|ADR64962.1| paired box 9 [Homo sapiens]
 gi|313506896|gb|ADR64963.1| paired box 9 [Homo sapiens]
 gi|313506898|gb|ADR64964.1| paired box 9 [Homo sapiens]
 gi|313506900|gb|ADR64965.1| paired box 9 [Homo sapiens]
 gi|313506902|gb|ADR64966.1| paired box 9 [Homo sapiens]
 gi|313506904|gb|ADR64967.1| paired box 9 [Homo sapiens]
 gi|313506906|gb|ADR64968.1| paired box 9 [Homo sapiens]
 gi|313506908|gb|ADR64969.1| paired box 9 [Homo sapiens]
 gi|313506910|gb|ADR64970.1| paired box 9 [Homo sapiens]
 gi|313506912|gb|ADR64971.1| paired box 9 [Homo sapiens]
 gi|313506914|gb|ADR64972.1| paired box 9 [Homo sapiens]
 gi|313506916|gb|ADR64973.1| paired box 9 [Homo sapiens]
 gi|313506918|gb|ADR64974.1| paired box 9 [Homo sapiens]
 gi|313506920|gb|ADR64975.1| paired box 9 [Homo sapiens]
 gi|313506922|gb|ADR64976.1| paired box 9 [Homo sapiens]
 gi|313506924|gb|ADR64977.1| paired box 9 [Homo sapiens]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|71727369|gb|AAZ39846.1| paired box 9, partial [Papio anubis]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|71727375|gb|AAZ39849.1| paired box 9, partial [Ateles geoffroyi]
 gi|71727377|gb|AAZ39850.1| paired box 9, partial [Lagothrix lagotricha]
 gi|71727379|gb|AAZ39851.1| paired box 9, partial [Pithecia pithecia]
 gi|71727381|gb|AAZ39852.1| paired box 9, partial [Otolemur garnettii]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|71727373|gb|AAZ39848.1| paired box 9, partial [Colobus angolensis palliatus]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|312073997|ref|XP_003139772.1| vab-3 [Loa loa]
          Length = 126

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 50/61 (81%)

Query: 113 IVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILS 172
           + A   H GVNQLGGVFVNGRPLPD  RQ+IV+LAH G RPCDISR L+VS+GCVSKIL 
Sbjct: 5   LFADSGHTGVNQLGGVFVNGRPLPDSTRQKIVDLAHQGARPCDISRILQVSNGCVSKILC 64

Query: 173 R 173
           R
Sbjct: 65  R 65



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 2/70 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT  V D I SYKRE P++FAWEIRD+LL E 
Sbjct: 59  VSKILC--RYYESGTIRPRAIGGSKPRVATVSVCDKIESYKREQPSIFAWEIRDKLLHEK 116

Query: 66  ICSQDNVPSV 75
           +CS D +PSV
Sbjct: 117 VCSPDTIPSV 126


>gi|195055745|ref|XP_001994773.1| GH17421 [Drosophila grimshawi]
 gi|193892536|gb|EDV91402.1| GH17421 [Drosophila grimshawi]
          Length = 347

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 64



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 64  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 123

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 124 SVSSISRIL 132


>gi|114325757|gb|ABI64089.1| paired box protein 1 [Equus caballus]
          Length = 112

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 1   TYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 56



 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 41/56 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQ 69
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+G+C +
Sbjct: 56  RYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDK 111


>gi|194744207|ref|XP_001954586.1| GF16668 [Drosophila ananassae]
 gi|190627623|gb|EDV43147.1| GF16668 [Drosophila ananassae]
          Length = 372

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 12  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 66



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 66  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 125

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 126 SVSSISRIL 134


>gi|11181941|emb|CAC16141.1| Pax-9 [Gallus gallus]
          Length = 208

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|195583726|ref|XP_002081667.1| GD25595 [Drosophila simulans]
 gi|194193676|gb|EDX07252.1| GD25595 [Drosophila simulans]
          Length = 425

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|71727383|gb|AAZ39853.1| paired box 9, partial [Eulemur albifrons]
          Length = 196

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 2   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 57



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 57  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 116

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 117 SVSSISRIL 125


>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
          Length = 546

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK   +P VD  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQTASPEVDKKIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           GIC ++NVPSVS+I+R +
Sbjct: 141 GICDRNNVPSVSAISRVM 158



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/54 (77%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  GRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|341903373|gb|EGT59308.1| hypothetical protein CAEBREN_04513 [Caenorhabditis brenneri]
          Length = 473

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RYYE+G+ +   IGGSKP+VAT+ VV+ I  YKR+ P++FAWEIRD+LL++ 
Sbjct: 66  VSKILC--RYYESGTIRPRAIGGSKPRVATSDVVEKIEEYKRDQPSIFAWEIRDKLLSDS 123

Query: 66  ICSQDNVPSVSSINRYI 82
           IC+ + +PSVSSINR +
Sbjct: 124 ICNNETIPSVSSINRVL 140



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IV LAH G RPCDISR L+VS+GCVSKIL R
Sbjct: 18  HTGVNQLGGVFVNGRPLPDATRQKIVALAHQGRRPCDISRILQVSNGCVSKILCR 72


>gi|241681430|ref|XP_002411608.1| paired box protein Pax-6, putative [Ixodes scapularis]
 gi|215504348|gb|EEC13842.1| paired box protein Pax-6, putative [Ixodes scapularis]
          Length = 433

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGV+VNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 5   HSGVNQLGGVYVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 59



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA +KRE P++FAWEIRDRLL+EGI       
Sbjct: 59  RYYETGSIRPRAIGGSKPRVATPDVVSKIAGFKRECPSIFAWEIRDRLLSEGIV-LGAAA 117

Query: 74  SVSSINRYI 82
            VSSINR +
Sbjct: 118 QVSSINRVL 126


>gi|195334711|ref|XP_002034020.1| GM20119 [Drosophila sechellia]
 gi|194125990|gb|EDW48033.1| GM20119 [Drosophila sechellia]
          Length = 425

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|1648964|gb|AAC60035.1| Pax9b [Danio rerio]
 gi|50369228|gb|AAH75867.1| Pax9 protein [Danio rerio]
          Length = 270

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPNVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
          Length = 470

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS K G IGGSKP+VAT  V   I  YKR+NP MF+WEIRDRLL +G
Sbjct: 58  VSKILC--RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDG 115

Query: 66  ICSQDNVPSVSSINRYI 82
           +C +  VPSVSSI+R +
Sbjct: 116 MCDRSTVPSVSSISRIL 132



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 10  QGRVNQLGGVFINGRPLPNHIRHKIVEMAAAGIRPCVISRQLRVSHGCVSKILCR 64


>gi|110748618|gb|ABG89862.1| Pax9 splice variant b [Astyanax mexicanus]
          Length = 270

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|443710563|gb|ELU04773.1| hypothetical protein CAPTEDRAFT_166874 [Capitella teleta]
          Length = 199

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 49/53 (92%)

Query: 121 GVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           GVNQLGGVFVNGRPLPD VR+RIVELA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 8   GVNQLGGVFVNGRPLPDSVRRRIVELALLGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 56/78 (71%), Gaps = 2/78 (2%)

Query: 14  RYYETGSFKAGVIGGSKPK--VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDN 71
           R+YETGS K G IGG KPK  VAT  VV  I ++K+ NP++FAWEIRD+LLA GIC   +
Sbjct: 60  RFYETGSIKPGAIGGGKPKSRVATPYVVKRILAFKQSNPSLFAWEIRDQLLALGICDHQS 119

Query: 72  VPSVSSINRYITYVPIGH 89
           +PSVSSINR +   P  H
Sbjct: 120 IPSVSSINRILRNTPSVH 137


>gi|170040723|ref|XP_001848139.1| paired box protein Pax-6 [Culex quinquefasciatus]
 gi|167864322|gb|EDS27705.1| paired box protein Pax-6 [Culex quinquefasciatus]
          Length = 559

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 51/64 (79%)

Query: 108 VVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCV 167
           ++   +V   SH GVNQLGG+FV GRPLPD  RQRIVELAH G RPCDISR L+VS+GCV
Sbjct: 52  IITIAMVPPVSHSGVNQLGGIFVGGRPLPDSTRQRIVELAHAGARPCDISRILQVSNGCV 111

Query: 168 SKIL 171
           SKIL
Sbjct: 112 SKIL 115



 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 48/64 (75%)

Query: 19  GSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVPSVSSI 78
           GS +   IGGSKP+VAT  VV  I+ +K+  P +FAWEIRD+LL E IC+ +N+PSVSSI
Sbjct: 116 GSIRPRAIGGSKPRVATPEVVHRISQFKQNCPNIFAWEIRDKLLNERICTPENIPSVSSI 175

Query: 79  NRYI 82
           NR +
Sbjct: 176 NRVL 179


>gi|322797242|gb|EFZ19418.1| hypothetical protein SINV_09237 [Solenopsis invicta]
          Length = 210

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 24  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 78



 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 78  RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 137

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 138 SVSSISRIL 146


>gi|194882735|ref|XP_001975466.1| GG22332 [Drosophila erecta]
 gi|190658653|gb|EDV55866.1| GG22332 [Drosophila erecta]
          Length = 426

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|17136410|ref|NP_476686.1| Pox neuro, isoform A [Drosophila melanogaster]
 gi|442623858|ref|NP_001261016.1| Pox neuro, isoform B [Drosophila melanogaster]
 gi|32130448|sp|P23758.3|POXN_DROME RecName: Full=Paired box pox-neuro protein; AltName: Full=Paired
           box neuronal protein
 gi|7303035|gb|AAF58104.1| Pox neuro, isoform A [Drosophila melanogaster]
 gi|66571132|gb|AAY51531.1| IP01592p [Drosophila melanogaster]
 gi|220943414|gb|ACL84250.1| Poxn-PA [synthetic construct]
 gi|220953340|gb|ACL89213.1| Poxn-PA [synthetic construct]
 gi|440214436|gb|AGB93548.1| Pox neuro, isoform B [Drosophila melanogaster]
          Length = 425

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|195452518|ref|XP_002073388.1| GK14101 [Drosophila willistoni]
 gi|194169473|gb|EDW84374.1| GK14101 [Drosophila willistoni]
          Length = 367

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 15  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 69



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 69  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 128

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 129 SVSSISRIL 137


>gi|158156|gb|AAA28832.1| pox neuro protein [Drosophila melanogaster]
          Length = 425

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|195499075|ref|XP_002096794.1| GE24855 [Drosophila yakuba]
 gi|194182895|gb|EDW96506.1| GE24855 [Drosophila yakuba]
          Length = 403

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 42  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 96



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 96  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 155

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 156 SVSSISRIL 164


>gi|254995977|dbj|BAH86770.1| paired-box transcription factor pax9 [Oryzias latipes]
          Length = 219

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 6   GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 523

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQGTTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           GIC ++NVPSVSSI+R +
Sbjct: 141 GICDRNNVPSVSSISRIM 158



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|383210369|dbj|BAM08281.1| eyeless, partial [Gryllus bimaculatus]
          Length = 111

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 51/62 (82%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VATA VV  I+ YKRE P++FAWEIRDRLL EG+C+ DN+P
Sbjct: 50  RYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCTNDNIP 109

Query: 74  SV 75
           +V
Sbjct: 110 TV 111



 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/50 (80%), Positives = 45/50 (90%)

Query: 124 QLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           QLGGVFV+GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R
Sbjct: 1   QLGGVFVSGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR 50


>gi|195488452|ref|XP_002092322.1| GE14129 [Drosophila yakuba]
 gi|194178423|gb|EDW92034.1| GE14129 [Drosophila yakuba]
          Length = 427

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|194903980|ref|XP_001980978.1| GG17455 [Drosophila erecta]
 gi|190652681|gb|EDV49936.1| GG17455 [Drosophila erecta]
          Length = 404

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 42  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 96



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 96  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 155

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 156 SVSSISRIL 164


>gi|350593922|ref|XP_001925864.2| PREDICTED: hypothetical protein LOC100156002 [Sus scrofa]
          Length = 712

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           R R+      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSK
Sbjct: 352 RWRVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSK 411

Query: 170 ILSR 173
           IL R
Sbjct: 412 ILCR 415



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 409 VSKILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKD 466

Query: 65  GICSQDNVPSVSSINRYI 82
            +C ++ VPSVSSI+R +
Sbjct: 467 AVCDRNTVPSVSSISRIL 484


>gi|307167082|gb|EFN60871.1| Paired box protein Pax-9 [Camponotus floridanus]
          Length = 211

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 50/55 (90%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 29  YGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 83



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 52/69 (75%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 83  RYHETGSILPGAIGGSKPRVTTPKVVQYIKQLKLKDPGIFAWEIRDRLLSDGVCDKYNVP 142

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 143 SVSSISRIL 151


>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
          Length = 464

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS K G IGGSKP+VAT  V   I  YKR+NP MF+WEIRDRLL +G
Sbjct: 58  VSKILC--RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDG 115

Query: 66  ICSQDNVPSVSSINRYI 82
           +C +  VPSVSSI+R +
Sbjct: 116 MCDRSTVPSVSSISRIL 132



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 10  QGRVNQLGGVFINGRPLPNHIRHKIVEMAAAGIRPCVISRQLRVSHGCVSKILCR 64


>gi|195330732|ref|XP_002032057.1| GM26349 [Drosophila sechellia]
 gi|194121000|gb|EDW43043.1| GM26349 [Drosophila sechellia]
          Length = 402

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 42  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 96



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 96  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 155

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 156 SVSSISRIL 164


>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
 gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
          Length = 464

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS K G IGGSKP+VAT  V   I  YKR+NP MF+WEIRDRLL +G
Sbjct: 58  VSKILC--RYQETGSIKPGAIGGSKPRVATPEVEKKIEDYKRDNPGMFSWEIRDRLLKDG 115

Query: 66  ICSQDNVPSVSSINRYI 82
           +C +  VPSVSSI+R +
Sbjct: 116 MCDRSTVPSVSSISRIL 132



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 10  QGRVNQLGGVFINGRPLPNHIRHKIVEMAAAGIRPCVISRQLRVSHGCVSKILCR 64


>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
          Length = 525

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + 
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDA 140

Query: 66  ICSQDNVPSVSSINRYI 82
           +C ++ VPSVSSI+R +
Sbjct: 141 VCDRNTVPSVSSISRIL 157


>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
          Length = 483

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL +G+C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDGVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157



 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|165979107|gb|ABY76999.1| Pax1 [Scyliorhinus canicula]
          Length = 354

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +++G VNQLGGVFVNGRPLP+ +R RIVE A  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 3   QTYGEVNQLGGVFVNGRPLPNAIRLRIVESAQLGIRPCDISRQLRVSHGCVSKILAR 59



 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YK+ +P +FAWEIRDRLLA+ +C + NVP
Sbjct: 59  RYNETGSILPGAIGGSKPRVTTPTVVKYIREYKQGDPGIFAWEIRDRLLADAVCDKYNVP 118

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 119 SVSSISRIL 127


>gi|91087217|ref|XP_975478.1| PREDICTED: similar to Pax-1 protein [Tribolium castaneum]
          Length = 251

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + +G VNQLGGVFVNGRPLP+ VR RIVEL+  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 8   QQYGEVNQLGGVFVNGRPLPNSVRLRIVELSQVGIRPCDISRQLRVSHGCVSKILAR 64



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K+++P +FAWEIRDRLL++GIC + NVP
Sbjct: 64  RYHETGSILPGAIGGSKPRVTTPKVVAYIKDLKQKDPGIFAWEIRDRLLSDGICDKYNVP 123

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 124 SVSSISRIL 132


>gi|47200825|emb|CAF88233.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 199

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 67  GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 120



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + N+P
Sbjct: 120 RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKFNLP 179

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 180 SVSSISRIL 188


>gi|443732527|gb|ELU17211.1| hypothetical protein CAPTEDRAFT_64892, partial [Capitella teleta]
          Length = 211

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 51/56 (91%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           ++G VNQLGG+FVNGRPLP+ VR RIVELA  GVRPCDISRQL+VSHGCVSKIL+R
Sbjct: 3   AYGEVNQLGGMFVNGRPLPNTVRLRIVELAQLGVRPCDISRQLKVSHGCVSKILAR 58



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VVD+I  YK ++P +FAWEIRD+LLA+ IC + NVP
Sbjct: 58  RYNETGSILPGTIGGSKPRVTTPKVVDSIRVYKDKDPGIFAWEIRDKLLADRICDKFNVP 117

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 118 SVSSISRIL 126


>gi|432958438|ref|XP_004086032.1| PREDICTED: paired box protein Pax-9, partial [Oryzias latipes]
          Length = 75

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/56 (80%), Positives = 50/56 (89%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 4   AFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 59


>gi|326920760|ref|XP_003206636.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-9-like
           [Meleagris gallopavo]
          Length = 373

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/54 (81%), Positives = 48/54 (88%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGG FVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 38  GEVNQLGGXFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 91



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 91  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 150

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 151 SVSSISRIL 159


>gi|116007976|ref|NP_001036687.1| Pox meso [Drosophila melanogaster]
 gi|122065913|sp|P23757.3|POXM_DROME RecName: Full=Paired box pox-meso protein; AltName: Full=Paired box
           mesodermal protein
 gi|91984703|gb|ABE69188.1| Pox meso P29c1 [Drosophila melanogaster]
 gi|91984705|gb|ABE69189.1| Pox meso P29c2 [Drosophila melanogaster]
 gi|92109780|gb|ABE73214.1| IP16421p [Drosophila melanogaster]
 gi|113194756|gb|ABI31147.1| Pox meso [Drosophila melanogaster]
          Length = 370

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 64



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 64  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 123

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 124 SVSSISRIL 132


>gi|390178247|ref|XP_001358848.3| GA21910 [Drosophila pseudoobscura pseudoobscura]
 gi|388859377|gb|EAL27991.3| GA21910 [Drosophila pseudoobscura pseudoobscura]
          Length = 376

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 14  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 68



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 68  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 127

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 128 SVSSISRIL 136


>gi|270010988|gb|EFA07436.1| pox meso [Tribolium castaneum]
          Length = 280

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 117 RSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           + +G VNQLGGVFVNGRPLP+ VR RIVEL+  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 37  QQYGEVNQLGGVFVNGRPLPNSVRLRIVELSQVGIRPCDISRQLRVSHGCVSKILAR 93



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV  I   K+++P +FAWEIRDRLL++GIC + NVP
Sbjct: 93  RYHETGSILPGAIGGSKPRVTTPKVVAYIKDLKQKDPGIFAWEIRDRLLSDGICDKYNVP 152

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 153 SVSSISRIL 161


>gi|346644870|ref|NP_001231107.1| paired box protein Pax-6 isoform 2 [Sus scrofa]
          Length = 355

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 47/53 (88%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVS I
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSSI 56


>gi|327259833|ref|XP_003214740.1| PREDICTED: paired box protein Pax-6-like isoform 6 [Anolis
           carolinensis]
          Length = 355

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 47/53 (88%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVS I
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSSI 56


>gi|259013402|ref|NP_001158408.1| paired box transcription factor pax1/9 [Saccoglossus kowalevskii]
 gi|113196536|gb|ABI31622.1| paired box transcription factor pax1/9 [Saccoglossus kowalevskii]
          Length = 383

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/54 (83%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  GEVNQLGGVFVNGRPLPNGIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 63



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I  YKR +P +FAWEIRDRL+A+ +C + NVP
Sbjct: 63  RYNETGSILPGAIGGSKPRVTTPTVVKHIKEYKRMDPGIFAWEIRDRLIADNVCDKYNVP 122

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 123 SVSSISRIL 131


>gi|115501617|gb|ABI98856.1| paired box 6 transcript variant 11 [Columba livia]
          Length = 355

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 47/53 (88%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVS I
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSSI 56


>gi|1405549|emb|CAA34860.1| paired box pox meso protein [Drosophila melanogaster]
          Length = 138

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +G VNQLGGVFVNGRPLP+  R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 10  YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILAR 64



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+V T  VV+ I   K+ +P +FAWEIRDRLL+EGIC + NVP
Sbjct: 64  RYHETGSILPGAIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVP 123

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 124 SVSSISRIL 132


>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
          Length = 460

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGVRPCVISRQLRVSHGCVSKILCR 89



 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKRENP 50
            LC  RY ETGS + G IGGSKPK  T P V+  +  +KR+NP
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKMEEFKRDNP 126


>gi|254733062|gb|ACT79976.1| pox-meso, partial [Nasonia vitripennis]
          Length = 125

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 120 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           G VNQLGGVFVNGRPLP+ VR RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 1   GEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 54



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY+ETGS   G IGGSKP+VAT  VV  I   K ++P +FAWEIRDRLL++G+C + NVP
Sbjct: 54  RYHETGSILPGAIGGSKPRVATPKVVQYIKQLKHKDPGIFAWEIRDRLLSDGVCDKYNVP 113

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 114 SVSSISRIL 122


>gi|1405550|emb|CAA41721.1| paired box pox neuro protein [Drosophila melanogaster]
          Length = 135

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/55 (83%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+LA  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|61967942|gb|AAX56950.1| PAX6 [Homo sapiens]
          Length = 115

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 50/61 (81%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RYYETGS +   IGGSKP+VAT  VV  IA YKRE P++FAWEIRDRLL+EG+C+ DN+P
Sbjct: 55  RYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIP 114

Query: 74  S 74
           S
Sbjct: 115 S 115



 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 47/55 (85%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           H GVNQLGGVFVNGRPLPD  RQ+IVELAH+  RPCDISR L+VS+ CVSKIL R
Sbjct: 1   HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSAARPCDISRILQVSNACVSKILGR 55


>gi|115501619|gb|ABI98857.1| paired box 6 transcript variant 12 [Columba livia]
          Length = 349

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/53 (81%), Positives = 47/53 (88%)

Query: 118 SHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           SH GVNQLGGVFVNGRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVS I
Sbjct: 4   SHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSSI 56


>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
          Length = 517

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 53/64 (82%)

Query: 110 RQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSK 169
           ++++      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSK
Sbjct: 41  KKKLSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSK 100

Query: 170 ILSR 173
           IL R
Sbjct: 101 ILCR 104



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRDRLL +
Sbjct: 98  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKD 155

Query: 65  GICSQDNVPSVSSINRYI 82
           G C +  VPSVSSI+R +
Sbjct: 156 GHCDRSTVPSVSSISRVL 173


>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
          Length = 850

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|195026925|ref|XP_001986368.1| GH20564 [Drosophila grimshawi]
 gi|193902368|gb|EDW01235.1| GH20564 [Drosophila grimshawi]
          Length = 472

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/55 (81%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
             GVNQLGGVFVNGRPLPD VR+RIV+ A  GVRPCDISRQL VSHGCVSKIL+R
Sbjct: 6   QAGVNQLGGVFVNGRPLPDCVRRRIVDHALCGVRPCDISRQLLVSHGCVSKILTR 60



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 14  RYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNV 72
           R+YETGS + G IGGSK K VAT  VV  I   K EN  MFAWEIR++L  + +C   +V
Sbjct: 60  RFYETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSV 119

Query: 73  PSVSSINRYI 82
           PS+SSINR +
Sbjct: 120 PSISSINRIL 129


>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
          Length = 460

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGVRPCVISRQLRVSHGCVSKILCR 89



 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKRENP 50
            LC  RY ETGS + G IGGSKPK  T P V+  +  +KR+NP
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKMEEFKRDNP 126


>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
          Length = 554

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 59/78 (75%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK  T+P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQGTSPDVERRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           GIC ++NVPSVS+I+R +
Sbjct: 141 GICDRNNVPSVSAISRIM 158



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
          Length = 319

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 6   QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 60



 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKPK  T  V   I  YKRENP MF+WEIRD+LL + 
Sbjct: 54  VSKILC--RYQETGSIRPGAIGGSKPKATTPDVEKKIEEYKRENPGMFSWEIRDKLLKDA 111

Query: 66  ICSQDNVPSVSSINRYI 82
           +C ++ VPSVSSI+R +
Sbjct: 112 VCDRNTVPSVSSISRIL 128


>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
 gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
          Length = 510

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 82.4 bits (202), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 12/87 (13%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-----VATAPVVDAIASYKRENPTMFAWEIRDR 60
           ++  LC  RY ETGS + G IGGSKP+     VAT  V   I  YKRENP MF+WEIRD+
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQTQKQVATPDVEKRIEEYKRENPGMFSWEIRDK 140

Query: 61  LLAEGICSQDNVP-----SVSSINRYI 82
           LL +G+C +  VP     SVSSI+R +
Sbjct: 141 LLKDGVCDRSTVPSGEASSVSSISRVL 167


>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
 gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
           Full=Paired-domain transcription factor Pax3-A
 gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGVRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  +  +KR+NP MF+WEIRD+LL +G+C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKMEEFKRDNPGMFSWEIRDKLLKDGVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
 gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
          Length = 836

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
          Length = 835

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
 gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
          Length = 439

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V   I  YKRENP +F+WEIRDRL+ EGIC + +VP
Sbjct: 78  RYQETGSIRPGVIGGSKPRVATPEVEKRIEDYKRENPGIFSWEIRDRLIKEGICDRSSVP 137

Query: 74  SVSSINRYI 82
           SVS+I+R +
Sbjct: 138 SVSAISRLL 146



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/55 (74%), Positives = 48/55 (87%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A  G+RPC ISRQLRVSHGCVSKIL+R
Sbjct: 24  QGRVNQLGGVFINGRPLPNQIRLKIVEMAGAGIRPCVISRQLRVSHGCVSKILNR 78


>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
 gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
          Length = 414

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V + I  YKRENP++F+WEIRDRL+ EGIC +   P
Sbjct: 93  RYQETGSIRPGVIGGSKPRVATPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRSTAP 152

Query: 74  SVSSINRYI 82
           SVS+I+R +
Sbjct: 153 SVSAISRLL 161



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A NG+RPC ISRQLRVSHGCVSKIL+R
Sbjct: 39  QGRVNQLGGVFINGRPLPNHIRLKIVEMAANGIRPCVISRQLRVSHGCVSKILNR 93


>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
          Length = 529

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 54/72 (75%)

Query: 102 GRPLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLR 161
           GR  P   R  +      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLR
Sbjct: 63  GRLRPRNDRPALSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLR 122

Query: 162 VSHGCVSKILSR 173
           VSHGCVSKIL R
Sbjct: 123 VSHGCVSKILCR 134



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRD+LL +G+C
Sbjct: 131 ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVC 188

Query: 68  SQDNVPSVSSINRYI 82
            +++VPSVSSI+R +
Sbjct: 189 DRNSVPSVSSISRIL 203


>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
 gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
           laevis]
          Length = 461

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 90



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKRENP 50
            LC  RY ETGS + G IGGSKPK  T P V+  I  +KR+NP
Sbjct: 87  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKIEEFKRDNP 127


>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
          Length = 459

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 2/42 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENP 50
            LC  RY ETGS + G IGGSKPKV T  V   I  +KR+NP
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNP 125


>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
          Length = 505

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVELAH+GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 25  QGRVNQLGGVFINGRPLPNHIRHKIVELAHHGVRPCVISRQLRVSHGCVSKILCR 79



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VA+  V   I  YKRENP MF+WEIRDRLL +
Sbjct: 73  VSKILC--RYQETGSIRPGAIGGSKPRQVASTDVERKIEEYKRENPGMFSWEIRDRLLKD 130

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C + +VPSVSSI+R +
Sbjct: 131 GVCDRASVPSVSSISRIL 148


>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
 gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
 gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
 gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
 gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
 gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
           gorilla]
 gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
 gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
           sapiens]
 gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
           camtschaticum]
          Length = 507

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVELAH+GVRPC ISRQLRVSHGCVSKIL R
Sbjct: 25  QGRVNQLGGVFINGRPLPNHIRHKIVELAHHGVRPCVISRQLRVSHGCVSKILCR 79



 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VA+  V   I  YKRENP MF+WEIRDRLL +
Sbjct: 73  VSKILC--RYQETGSIRPGAIGGSKPRQVASTDVERKIEEYKRENPGMFSWEIRDRLLKD 130

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C + +VPSVSSI+R +
Sbjct: 131 GVCDRASVPSVSSISRIL 148


>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
 gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
 gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
 gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
 gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
 gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
          Length = 483

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
          Length = 483

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
          Length = 482

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 34  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 88



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 85  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 142

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 143 RNTVPSVSSISRIL 156


>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
          Length = 479

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
 gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
           abelii]
 gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
           sapiens]
          Length = 505

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
          Length = 483

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
 gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
           transcription factor Pax3
          Length = 461

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKRENP 50
            LC  RY ETGS + G IGGSKPK  T P V+  I  +KR+NP
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKIEEFKRDNP 126


>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 483

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
           boliviensis]
          Length = 479

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
          Length = 505

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
          Length = 488

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 39  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 93



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 90  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 147

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 148 DRNTVPSVSSISRIL 162


>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
          Length = 462

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 90



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKRENP 50
            LC  RY ETGS + G IGGSKPK  T P V+  I  +KR+NP
Sbjct: 87  ILC--RYQETGSIRPGAIGGSKPKQVTTPEVEKKIEEFKRDNP 127


>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
          Length = 484

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
          Length = 447

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 54/69 (78%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V + I  YKRENP++F+WEIRDRL+ EGIC +   P
Sbjct: 76  RYQETGSIRPGVIGGSKPRVATPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRSTAP 135

Query: 74  SVSSINRYI 82
           SVS+I+R +
Sbjct: 136 SVSAISRLL 144



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+A NG+RPC ISRQLRVSHGCVSKIL+R
Sbjct: 22  QGRVNQLGGVFINGRPLPNHIRLKIVEMAANGIRPCVISRQLRVSHGCVSKILNR 76


>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
          Length = 479

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL   +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKGAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
          Length = 484

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
          Length = 479

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
           niloticus]
          Length = 509

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
 gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
 gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
          Length = 484

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
 gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
 gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
 gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
          Length = 479

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
          Length = 483

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
           niloticus]
          Length = 502

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
           carolinensis]
          Length = 461

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKREN 49
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKREN 125


>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
          Length = 483

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|37722079|gb|AAN65186.1| pax3/7 homeoprotein [Tetranychus urticae]
          Length = 185

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 51/69 (73%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS + GVIGGSKP+VAT  V   I  YKR+NP +FAWEIRDRL  EGIC ++  P
Sbjct: 32  RYQETGSIRPGVIGGSKPRVATPEVEKKIEEYKRDNPGIFAWEIRDRLCKEGICDKNTAP 91

Query: 74  SVSSINRYI 82
           S+SSI R +
Sbjct: 92  SISSITRLL 100



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 30/32 (93%)

Query: 142 RIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           +IVE+A +GVRPC ISR+LRVSHGCVSKIL+R
Sbjct: 1   KIVEMAASGVRPCVISRKLRVSHGCVSKILNR 32


>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
          Length = 479

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
          Length = 488

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 39  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 93



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 90  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 147

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 148 DRNTVPSVSSISRIL 162


>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
          Length = 487

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T+P +D  I  YKRE P MF+WEIRD+LL +GIC
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQTTSPEIDKKIEEYKRETPGMFSWEIRDKLLKDGIC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++NVPSVS+I+R +
Sbjct: 144 DRNNVPSVSAISRIM 158



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
          Length = 504

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)

Query: 104 PLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVS 163
           PLP  V   +      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVS
Sbjct: 24  PLPSPVSTPL----GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVS 79

Query: 164 HGCVSKILSR 173
           HGCVSKIL R
Sbjct: 80  HGCVSKILCR 89



 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKP+VAT  V   I  YKRENP MF+WEIRDRLL +G C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCD 143

Query: 69  QDNVPSVSSINRYI 82
           +  VPSVSSI+R +
Sbjct: 144 RSTVPSVSSISRVL 157


>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
 gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
           sapiens]
          Length = 407

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
           latipes]
          Length = 508

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 90



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 84  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 141

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 142 GVCDRSTVPSGEASSVSSISRVL 164


>gi|431906260|gb|ELK10457.1| Paired box protein Pax-7 [Pteropus alecto]
          Length = 249

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKP+VAT  V   I  YKRENP MF+WEIRDRLL +G
Sbjct: 73  VSKILC--RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDG 130

Query: 66  ICSQDNVPSVSSINRYI 82
            C +  VPSVSSI+R +
Sbjct: 131 HCDRSTVPSVSSISRVL 147



 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 51/63 (80%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRESNLH 178
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R     
Sbjct: 25  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETG 84

Query: 179 NYR 181
           + R
Sbjct: 85  SIR 87


>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
          Length = 473

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
          Length = 484

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
          Length = 479

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
          Length = 507

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
          Length = 483

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
 gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
 gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
 gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
 gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
           gorilla]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
           latipes]
          Length = 510

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 90



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 84  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 141

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 142 GVCDRSTVPSGEASSVSSISRVL 164


>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
 gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
 gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
 gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
           sapiens]
 gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
           sapiens]
          Length = 479

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
          Length = 479

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
          Length = 506

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 36  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 90



 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G  G    ++A   V   I  YK+ENP MF+WEIRD+LL +G+C 
Sbjct: 87  ILC--RYQETGSIRPGATGSKPRQMAIPDVEKKIEEYKKENPGMFSWEIRDKLLKDGMCD 144

Query: 69  QDNVPSVSSINRYI 82
           ++ +PSVSSI+R +
Sbjct: 145 RNTIPSVSSISRIL 158


>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
           Mbamba Bay']
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
           norvegicus]
          Length = 492

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKP+VAT  V   I  YKRENP MF+WEIRDRLL +G
Sbjct: 73  VSKILC--RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDG 130

Query: 66  ICSQDNVPSVSSINRYI 82
            C +  VPSVSSI+R +
Sbjct: 131 HCDRSTVPSVSSISRVL 147



 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 25  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 79


>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
           niloticus]
          Length = 526

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 49  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 103



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKR+NP MF+WEIRD+LL +
Sbjct: 97  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVERRIEEYKRDNPGMFSWEIRDKLLKD 154

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 155 GVCDRSTVPSGEASSVSSISRVL 177


>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
          Length = 505

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
 gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
           sapiens]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
          Length = 483

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  YKRENP MF+WEIRD+LL + +C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
           niloticus]
          Length = 512

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKR+NP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVERRIEEYKRDNPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
           carolinensis]
          Length = 461

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVD-AIASYKREN 49
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKREN 125


>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
          Length = 481

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
           Full=Paired-domain transcription factor Pax3-B
          Length = 483

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 92.4 bits (228), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKPKV T  V   I  +KR+NP MF+WEIRD+LL +G+C 
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCD 143

Query: 69  QDNVPSVSSINRYI 82
           ++ VPSVSSI+R +
Sbjct: 144 RNTVPSVSSISRIL 157


>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
 gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
 gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
 gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
 gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
          Length = 507

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRGTVPSGEASSVSSISRVL 163


>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
          Length = 506

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ET S + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETSSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
           Mbamba Bay']
          Length = 505

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 6/81 (7%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPS---VSSINRYI 82
           G+C +  VPS   +SSI+R +
Sbjct: 141 GVCDRSTVPSGFILSSISRVL 161


>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
          Length = 498

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKP+VAT  V   I  YKRENP MF+WEIRDRLL +G
Sbjct: 79  VSKILC--RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDG 136

Query: 66  ICSQDNVPSVSSINRYI 82
            C +  VPSVSSI+R +
Sbjct: 137 HCDRSTVPSVSSISRVL 153



 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 31  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 85


>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
          Length = 497

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
 gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
          Length = 487

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRGTVPSGEASSVSSISRVL 163


>gi|1854514|emb|CAA63436.1| Pax9 [Homo sapiens]
          Length = 331

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 47/51 (92%)

Query: 123 NQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           NQLGGVFVNGRPLP+ +R RIVELA  G+RPCDISRQLRVSHGCVSKIL+R
Sbjct: 1   NQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 51



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 14  RYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICSQDNVP 73
           RY ETGS   G IGGSKP+V T  VV  I +YK+ +P +FAWEIRDRLLA+G+C + NVP
Sbjct: 51  RYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVP 110

Query: 74  SVSSINRYI 82
           SVSSI+R +
Sbjct: 111 SVSSISRIL 119


>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
           carolinensis]
          Length = 484

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRD+LL +G+C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
          Length = 407

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
 gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
          Length = 501

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G I GSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIRGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 82.4 bits (202), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGG+KP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGNKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
 gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
          Length = 484

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRDRLL +G+C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDRLLKDGVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
          Length = 506

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
           niloticus]
          Length = 516

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 49  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 103



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 97  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 154

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 155 GVCDRSTVPSVSSISRVL 172


>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
          Length = 508

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASSVSSISRVL 163


>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
          Length = 514

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASVSSISRVL 175


>gi|281333979|gb|ADA61179.1| paired box 7 [Meleagris gallopavo]
          Length = 520

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRDRLL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G C +  VPSVSSI+R +
Sbjct: 141 GHCDRSTVPSVSSISRVL 158


>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
          Length = 592

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 54/70 (77%), Gaps = 4/70 (5%)

Query: 104 PLPDVVRQRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVS 163
           PLP  V   +      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVS
Sbjct: 150 PLPPAVSTPL----GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVS 205

Query: 164 HGCVSKILSR 173
           HGCVSKIL R
Sbjct: 206 HGCVSKILCR 215



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 2/74 (2%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEGICS 68
            LC  RY ETGS + G IGGSKP+VAT  V   I  YKRENP MF+WEIRDRLL +G C 
Sbjct: 212 ILC--RYQETGSIRPGAIGGSKPRVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCD 269

Query: 69  QDNVPSVSSINRYI 82
           +  VPSVSSI+R +
Sbjct: 270 RSTVPSVSSISRVL 283


>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
          Length = 501

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASVSSISRVL 162


>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
          Length = 495

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 3/63 (4%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GIC 67
           GIC
Sbjct: 141 GIC 143


>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
           niloticus]
          Length = 518

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 49  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 103



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 97  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 154

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 155 GVCDRSTVPSVSSISRVL 172


>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
           carolinensis]
          Length = 485

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRD+LL +G+C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
          Length = 482

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRD+LL +G+C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
          Length = 403

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 143

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 144 DRNTVPSVSSISRIL 158


>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
          Length = 424

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
            +C ++ VPSVSSI+R +
Sbjct: 141 AVCDRNTVPSVSSISRIL 158


>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
          Length = 505

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASVSSISRVL 162


>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
          Length = 514

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP M +WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMSSWEIRDKLLKD 153

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASVSSISRVL 175


>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
           latipes]
          Length = 511

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
          Length = 519

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASSVSSISRVL 176


>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
          Length = 501

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASVSSISRVL 162


>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
          Length = 514

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
          Length = 502

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKR+NP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRDNPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
           latipes]
          Length = 517

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
          Length = 510

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
 gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
          Length = 520

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASSVSSISRVL 176


>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
          Length = 501

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
          Length = 505

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 141 GVCDRSTVPSGEASVSSISRVL 162


>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
          Length = 268

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKPKV T  V   I  +KR+NP MF+WEIRD+LL +G
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDG 140

Query: 66  ICSQDNVPSVSSINRYI 82
           +C ++ VPSVSSI+R +
Sbjct: 141 VCDRNTVPSVSSISRIL 157



 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89


>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
          Length = 515

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASSVSSISRVL 176


>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
 gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
          Length = 497

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
          Length = 514

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
          Length = 515

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASSVSSISRVL 176


>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
          Length = 459

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 10  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 64



 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIRD+LL +G+C
Sbjct: 61  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRDKLLKDGVC 118

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 119 DRNTVPSVSSISRIL 133


>gi|241702555|ref|XP_002411942.1| paired box protein, putative [Ixodes scapularis]
 gi|215504913|gb|EEC14407.1| paired box protein, putative [Ixodes scapularis]
          Length = 177

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 48/52 (92%)

Query: 122 VNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
           VNQLGGVFVNGRPLP+ VR RIVELA  GVRPCDISRQLRVSHGCVSKIL+R
Sbjct: 14  VNQLGGVFVNGRPLPNGVRLRIVELAQLGVRPCDISRQLRVSHGCVSKILAR 65



 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 10/79 (12%)

Query: 14  RYYETGSFKAGVIGGSKPKV-----ATAP-----VVDAIASYKRENPTMFAWEIRDRLLA 63
           R++ETGS   G IGGSKP+V     +TAP     VV +I   KR++P +FAWEIRDRLLA
Sbjct: 65  RFHETGSILPGAIGGSKPRVTTPKASTAPANSSLVVASIRELKRKDPGIFAWEIRDRLLA 124

Query: 64  EGICSQDNVPSVSSINRYI 82
           EG+C + NVPSVSSI+R +
Sbjct: 125 EGVCDKANVPSVSSISRIL 143


>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
          Length = 513

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 2/77 (2%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDAIASYKRENPTMFAWEIRDRLLAEG 65
           ++  LC  RY ETGS + G IGGSKP+V+T  V   I  YKRENP MF+WEIRD+LL +G
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKDG 153

Query: 66  ICSQDNVPSVSSINRYI 82
           +C +  VPSVSSI+R +
Sbjct: 154 VCDRSTVPSVSSISRVL 170


>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
          Length = 1024

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 51/63 (80%)

Query: 111 QRIVASRSHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKI 170
           Q +      G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKI
Sbjct: 546 QPVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKI 605

Query: 171 LSR 173
           L R
Sbjct: 606 LCR 608



 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKRENP MF+WEIRD+LL + +C
Sbjct: 605 ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVC 662

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 663 DRNTVPSVSSISRIL 677


>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
          Length = 505

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 5/80 (6%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRDRLL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKD 140

Query: 65  GICSQDNVPS--VSSINRYI 82
           G C +  VPS  VSSI+R +
Sbjct: 141 GHCDRSTVPSGLVSSISRVL 160


>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
          Length = 479

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 30  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 84



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 3/75 (4%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKPK  T P V+  I  YKREN  MF+WEIR+RLL +G+C
Sbjct: 81  ILC--RYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENAGMFSWEIRERLLKDGVC 138

Query: 68  SQDNVPSVSSINRYI 82
            ++ VPSVSSI+R +
Sbjct: 139 DRNTVPSVSSISRIL 153


>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
          Length = 514

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 154 GVCDRSTVPSVSSISRVL 171


>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
          Length = 502

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 5/77 (6%)

Query: 9   FLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAEGIC 67
            LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRDRLL +G C
Sbjct: 86  ILC--RYQETGSIRPGAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHC 143

Query: 68  SQDNVPS--VSSINRYI 82
            +  VPS  VSSI+R +
Sbjct: 144 DRSTVPSGLVSSISRVL 160


>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 591

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 89.7 bits (221), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 3/78 (3%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVPSVSSINRYI 82
           G+C +  VPSVSSI+R +
Sbjct: 141 GVCDRSTVPSVSSISRVL 158


>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
          Length = 518

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 48  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 102



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPKVATAPVVDA-IASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+  + P V+  I  YKRENP MF+WEIRD+LL +
Sbjct: 96  VSKILC--RYQETGSIRPGAIGGSKPRQVSTPDVEKRIEEYKRENPGMFSWEIRDKLLKD 153

Query: 65  GICSQDNVP----SVSSINRYI 82
           G+C +  VP    SVSSI+R +
Sbjct: 154 GVCDRSTVPSGEASVSSISRVL 175


>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
          Length = 395

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 49/55 (89%)

Query: 119 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSR 173
            G VNQLGGVF+NGRPLP+ +R +IVE+AH+G+RPC ISRQLRVSHGCVSKIL R
Sbjct: 35  QGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCR 89



 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 8/83 (9%)

Query: 6   LTPFLCPRRYYETGSFKAGVIGGSKPK-VATAPVVDAIASYKRENPTMFAWEIRDRLLAE 64
           ++  LC  RY ETGS + G IGGSKP+ VAT  V   I  YKRENP MF+WEIRD+LL +
Sbjct: 83  VSKILC--RYQETGSIRPGAIGGSKPRQVATPDVEKRIEEYKRENPGMFSWEIRDKLLKD 140

Query: 65  GICSQDNVP-----SVSSINRYI 82
           G+C +  VP     SVSSI+R +
Sbjct: 141 GVCDRGTVPSGEASSVSSISRVL 163


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.140    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,192,045,126
Number of Sequences: 23463169
Number of extensions: 132247670
Number of successful extensions: 289916
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1533
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 285240
Number of HSP's gapped (non-prelim): 4377
length of query: 197
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 62
effective length of database: 9,191,667,552
effective search space: 569883388224
effective search space used: 569883388224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)