RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10762
(126 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 132 bits (335), Expect = 1e-40
Identities = 55/114 (48%), Positives = 76/114 (66%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
HTGE P++C C K+F+ K+ L H R HTGE P+ C C KSF+++ ++ H+R HTGE
Sbjct: 44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
P+ C C K+F++ HL H R HTGE P+KC C KSF+R+++L H R HT
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157
Score = 131 bits (333), Expect = 3e-40
Identities = 53/114 (46%), Positives = 70/114 (61%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
GE P+ C C K+F+R +HL H R HTGE P+ C C KSF+ K + H+R HTGE
Sbjct: 16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE 75
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
P+ C C K+F+++ +L H R HTGE P+ C C KSF++ HL H R HT
Sbjct: 76 KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129
Score = 131 bits (332), Expect = 4e-40
Identities = 56/114 (49%), Positives = 77/114 (67%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
HTGE P++C C K+F+++ +L H R HTGE P+ C C KSF++ H+ H+R HTGE
Sbjct: 72 HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
P+ C C K+F+R+D+L H R HTGE P+KC C KSF+R++ L H R HT
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185
Score = 114 bits (287), Expect = 2e-33
Identities = 43/100 (43%), Positives = 56/100 (56%)
Query: 17 TFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTR 76
+ V GE P+ C C KSF+R DH+ H+R HTGE P+ C C K+F+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 77 KDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
K L H R HTGE P+KC C KSF+++ +L H R HT
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHT 101
Score = 105 bits (265), Expect = 5e-30
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
HTGE P+ C C K+F++ HL H R HTGE P+ C C KSF+R+D++ H+R HTGE
Sbjct: 100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
P+ C C K+F+R+D L H R HTG+
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 128 bits (323), Expect = 1e-39
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ---H 59
+G + C C K F K +L H R+HTGE P C C K + RK++++ HE + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 60 TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH-IRQHT 116
E F C C + F R+ L H+ HTGE P+KC+ C + F +K+ L +H I+ H+
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 70.2 bits (173), Expect = 5e-17
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
+G + C C K F K +L H R+HTGE P +C C K + RKE+L H ++ +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 117 bits (297), Expect = 8e-36
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+G+ + C C K+FT K H+ H G P+ C C K F K H+V H + HTG
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
P+ C C K F +D H + ++ ++ T ++
Sbjct: 64 KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 92.5 bits (231), Expect = 8e-26
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
+G+ + C C KSFT K H H G P+ C C K F K HLV H++ HT
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 89 GESPHKCTYCMKSFTRKEHLTNHIRQHT 116
G P++C C K F ++ H +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTS 87
Score = 74.4 bits (184), Expect = 9e-19
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
+G+ +PCQ C K+FT K H+ H G P+ C C K F K HL H++ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 116 T 116
T
Sbjct: 61 T 61
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 116 bits (294), Expect = 3e-35
Identities = 48/118 (40%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 4 TGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQH 59
+ + P C Y C K + + HL H R+HTGE P+ C++ C + F+R D + H+R+H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 60 TGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQH 115
TG PF C+ C + F+R DHL H R HTGE P C + C K F R + L H H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 92.6 bits (231), Expect = 9e-26
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 32 TGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRH 87
+ + P C Y C K + + H+ H R+HTGE P+ C + C + F+R D L H RRH
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 88 TGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TG P +C C + F+R +HL H R HT
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Score = 92.2 bits (230), Expect = 1e-25
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
HTGE P++CD+ C + F+R + L H R+HTG P C C + F+R DH+ H R HT
Sbjct: 31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90
Query: 61 GETPFPCQY--CPKAFTRKDHLVNHVRRH 87
GE PF C++ C K F R D LV H H
Sbjct: 91 GEKPFSCRWPSCQKKFARSDELVRHHNMH 119
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear
protein, DNA- binding, transcription, C2H2-type zinc
finger, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 112 bits (283), Expect = 7e-34
Identities = 35/93 (37%), Positives = 46/93 (49%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
PH+C+ C K F+RK+ L H+R HTG P+ C C + + H R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
PF CQ CP A L H+R HTG+S
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 101 bits (255), Expect = 1e-29
Identities = 33/86 (38%), Positives = 41/86 (47%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
PH C C K F+RKD + H R HTG P+ C+ C A L H+R H+ E
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 91 SPHKCTYCMKSFTRKEHLTNHIRQHT 116
P KC C + LT H+R HT
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHT 88
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 113 bits (285), Expect = 2e-33
Identities = 43/127 (33%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHH---------CNYCAKSFTRKDHMV 53
+ C +TF+ LV HV P C KSF K +V
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 54 YHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLT 109
H R HTGE PFPC + C K F R ++L H R HTGE P KC + C + F
Sbjct: 80 NHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK 139
Query: 110 NHIRQHT 116
H+ HT
Sbjct: 140 KHMHVHT 146
Score = 100 bits (250), Expect = 2e-28
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 11/114 (9%)
Query: 14 CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF-------- 65
+ + ++ + C ++F+ +V H P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 66 -PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
C K+F K LVNH+R HTGE P C + C K F R E+L H R HT
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 116
Score = 91.6 bits (228), Expect = 5e-25
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 3 HTGETPHR---------CDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDH 51
P + C K+F K LVNH+R HTGE P C + C K F R ++
Sbjct: 48 EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSEN 107
Query: 52 MVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT 96
+ H+R HTGE PF C++ C + F H+ HT + +
Sbjct: 108 LKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 49.2 bits (118), Expect = 1e-08
Identities = 5/48 (10%), Positives = 13/48 (27%)
Query: 70 CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
+ ++ + C ++F+ L H+ V
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV 50
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 110 bits (278), Expect = 5e-33
Identities = 32/94 (34%), Positives = 45/94 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+ C +C + FT+ +L+ H R HT E P+ C+ C K+F R+DH+ H H+ E
Sbjct: 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE 71
Query: 63 TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
PF CQ C K F + L H H S
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 105 bits (266), Expect = 4e-31
Identities = 32/94 (34%), Positives = 44/94 (46%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
+ C +C + FT+ +++ HER HT E P+ C C KAF R+DHL +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
H H+ E P KC C K F + L H H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 109 bits (275), Expect = 6e-32
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 3 HTGETPHRCDYC-----AKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYH 55
H C + + F + LV H+R+HTGE PH C + C KS++R +++ H
Sbjct: 29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTH 88
Query: 56 ERQHTGETPFPCQY--CPKAFTRKDHLVNHVRR-HTGESPHKCTY--CMKSFTRKEHLTN 110
R HTGE P+ C++ C KAF+ H R H+ E P+ C C K +T L
Sbjct: 89 LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148
Query: 111 HIRQHT 116
H++
Sbjct: 149 HVKTVH 154
Score = 101 bits (254), Expect = 8e-29
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 13/124 (10%)
Query: 6 ETPHRCDYCAKTFTRKEHLVNHVRQ---HTGESPHHCNYC-----AKSFTRKDHMVYHER 57
ET R D C++ F +E LV+H+ H C++ + F + +V H R
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 58 QHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNH-I 112
+HTGE P C + C K+++R ++L H+R HTGE P+ C + C K+F+ H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 113 RQHT 116
R H+
Sbjct: 121 RTHS 124
Score = 82.6 bits (205), Expect = 2e-21
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYH-ER 57
HTGE PH+C + C K+++R E+L H+R HTGE P+ C + C+K+F+ H R
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 58 QHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTG 89
H+ E P+ C+ C K +T L HV+ G
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 29.5 bits (67), Expect = 0.18
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 90 ESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
E+ + C + F +E L +HI +
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHI 28
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 109 bits (276), Expect = 9e-32
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
+ C + C + + L H+ +HTGE P C C K FT H+ H
Sbjct: 7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT 66
Query: 59 HTGETPFPC--QYCPKAFTRKDHLVNHVRRHTGE--SPHKCTY--CMKSFTRKEHLTNHI 112
HTGE F C C FT K ++ H R + C + C K+F + L H
Sbjct: 67 HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126
Query: 113 RQHT 116
HT
Sbjct: 127 FSHT 130
Score = 108 bits (271), Expect = 6e-31
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN--YCAKSFTRKDHMVYHERQ 58
HTGE P C C K FT HL H HTGE C+ C FT K +M H +
Sbjct: 37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR 96
Query: 59 HTGE--TPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT--YCMKSFTRKEHLTNHI 112
+ C + C KAF + + L H HT + P++C C K F+ L H
Sbjct: 97 FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156
Query: 113 RQHT 116
+ H
Sbjct: 157 KVHA 160
Score = 95.4 bits (238), Expect = 5e-26
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 3 HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGE--SPHHCNY--CAKSFTRKDHMVYHE 56
HTGE CD C FT K ++ H + + C++ C K+F + + + H+
Sbjct: 67 HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126
Query: 57 RQHTGETPFPC--QYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
HT + P+ C + C K F+ L H + H G K C H+ +
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186
Score = 92.7 bits (231), Expect = 5e-25
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Query: 25 VNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHL 80
+ + C++ C ++ + + H +HTGE PFPC+ C K FT HL
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 81 VNHVRRHTGESPHKCT--YCMKSFTRKEHLTNHIRQHT 116
H HTGE C C FT K ++ H +
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 105 bits (264), Expect = 1e-30
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 6 ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
C + C K F + H+ H G H C C K+F + H+ HTGE
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
PF C + C K F+ +L HVR HTG+ P+ C + C K F + +L +HI H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118
Score = 93.0 bits (232), Expect = 8e-26
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 5 GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGE 62
G H C C K F L H HTGE P C + C K F+ ++ H R HTG+
Sbjct: 31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90
Query: 63 TPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHK 94
P+ C + C K F + +L +H+ H ++
Sbjct: 91 RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 67.2 bits (165), Expect = 1e-15
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
HTGE P +C + C K F+ +L HVR HTG+ P+ C + C K F + ++ H
Sbjct: 57 HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT 116
Query: 59 HTGETPF 65
H
Sbjct: 117 HAKAKNN 123
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 101 bits (255), Expect = 1e-29
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+G + C+ C K F HL H H+GE P+ C C F RKD M YH R H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 63 T--PFPCQYCPKAFTRKDHLVNHVRR-HTGE 90
P+ CQ C K F+R DHL H+++ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 96.8 bits (242), Expect = 1e-27
Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
+G S C C K F H+ H+ H+GE P+ C C F RKD + HVR H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 91 S--PHKCTYCMKSFTRKEHLTNHIRQ-HT 116
P+ C C K F+R +HL HI+Q H+
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 94.1 bits (235), Expect = 1e-26
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHT 60
T C KT+T+ HL H+R HTGE P+HC++ C F R D + H R+HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 61 GETPFPCQYCPKAFTRKDHLVNHVRRH 87
G PF CQ C +AF+R DHL H++RH
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 92.2 bits (230), Expect = 6e-26
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 30 QHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRH 87
+ T C K++T+ H+ H R HTGE P+ C + C F R D L H R+H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 88 TGESPHKCTYCMKSFTRKEHLTNHIRQH 115
TG P +C C ++F+R +HL H+++H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 63.7 bits (156), Expect = 7e-15
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 2 WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
HTGE P+ CD+ C F R + L H R+HTG P C C ++F+R DH+ H ++H
Sbjct: 29 THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 62.5 bits (153), Expect = 2e-14
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQH 115
+ T C K +T+ HL H+R HTGE P+ C + C F R + LT H R+H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 116 T 116
T
Sbjct: 61 T 61
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A
{Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB:
1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A*
1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 92.5 bits (231), Expect = 3e-26
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 6 ETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
E P+ C C + F++ L H+R HTG+ P C C ++F+R DH+ H R HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
PF C C + F R D H + H +
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQ 88
Score = 89.8 bits (224), Expect = 5e-25
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 34 ESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
E P+ C C + F++ + H R HTG+ PF C+ C + F+R DHL H+R HTGE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQHT 116
P C C + F R + H + H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHL 86
Score = 74.0 bits (183), Expect = 8e-19
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
HTG+ P +C C + F+R +HL H+R HTGE P C+ C + F R D H + H +
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 91.9 bits (229), Expect = 9e-26
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 17 TFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC--QYCPKAF 74
+ + R H + P C K +T+ H+ H R HTGE P+ C + C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYP----GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 75 TRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
R D L H R+HTG P +C C +SF+R +HL H+++H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 90.0 bits (224), Expect = 6e-25
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 3 HTGETPHRCD--YCAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
H CD C K +T+ HL H+R HTGE P+ C + C F R D + H R+
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
HTG PF C C ++F+R DHL H++RH
Sbjct: 70 HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 65.0 bits (159), Expect = 3e-15
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 2 WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
HTGE P++C + C F R + L H R+HTG P C C +SF+R DH+ H ++H
Sbjct: 39 THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Query: 60 T 60
Sbjct: 99 Q 99
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 91.0 bits (227), Expect = 2e-25
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET----PFPCQYCPKAFTRKD 78
+ R HTGE P+ C++C K+F +K + H +++ F C C K FTR++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 79 HLVNHVRRHTGESPHKCTYCMKSF 102
+ H G + S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 84.5 bits (210), Expect = 5e-23
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES----PHHCNYCAKSFTRKDHMVYHERQ 58
HTGE P+ C +C KTF +K+ L H +++ + C+ C K+FTR++ M H
Sbjct: 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN 69
Query: 59 HTGETPFPCQYCPKAF 74
G + +
Sbjct: 70 CAGPDGVEGENSGPSS 85
Score = 75.6 bits (187), Expect = 2e-19
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 51 HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES----PHKCTYCMKSFTRKE 106
R HTGE P+ C +C K F +K L H +R+ + C+ C K+FTR+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 107 HLTNHIRQHT 116
+ H
Sbjct: 62 TMARHADNCA 71
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 90.6 bits (226), Expect = 2e-25
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 39 CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
C C KSF R + H H+ P+PCQYC K F +K + H HTGE PHKC C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 99 MKSFTRKEHLTNHIRQHT 116
K+F++ +L H R+HT
Sbjct: 64 GKAFSQSSNLITHSRKHT 81
Score = 90.2 bits (225), Expect = 3e-25
Identities = 34/79 (43%), Positives = 44/79 (55%)
Query: 11 CDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC 70
C C K+F R L H+ H+ P+ C YC K F +K M H HTGE P CQ C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 71 PKAFTRKDHLVNHVRRHTG 89
KAF++ +L+ H R+HTG
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 71.7 bits (177), Expect = 6e-18
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
H+ P+ C YC K F +K + H HTGE PH C C K+F++ +++ H R+HTG
Sbjct: 24 HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 28.9 bits (66), Expect = 0.14
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 94 KCTYCMKSFTRKEHLTNHIRQHT 116
C C KSF R L+ H+ H+
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHS 25
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 86.0 bits (214), Expect = 1e-23
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
P +C C + F+R +HL H+R HTGE P C+ C + F R D H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 68 QYCPKAFTRKDHLVNHV---RRHTGE 90
+ ++ HL N V ++ GE
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGE 87
Score = 83.3 bits (207), Expect = 2e-22
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
P C C ++F+R DH+ H R HTGE PF C C + F R D H P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILE 61
Query: 96 TYCMKSFTRKEHLTNHI---RQHT 116
+ ++ HL N + ++
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLV 85
Score = 60.2 bits (147), Expect = 2e-13
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHM---VYHERQH 59
HTGE P CD C + F R + H P + + ++ H+ V ++
Sbjct: 26 HTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84
Query: 60 TGE 62
GE
Sbjct: 85 VGE 87
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 83.3 bits (207), Expect = 1e-22
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
Q + C+ C KSF+ + H R HTGE P+ C C KAF ++ HL+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 83 HVRRHTGESPHK 94
H R HTG P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 75.6 bits (187), Expect = 1e-19
Identities = 25/66 (37%), Positives = 32/66 (48%)
Query: 51 HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
E Q + C C K+F+ L H R HTGE P+KC C K+F ++ HL
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 111 HIRQHT 116
H R HT
Sbjct: 65 HHRVHT 70
Score = 75.6 bits (187), Expect = 2e-19
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
++CD C K+F+ L H R HTGE P+ C+ C K+F ++ H++ H R HTG
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72
Query: 63 TPF 65
P
Sbjct: 73 GPS 75
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc
finger, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 81.4 bits (202), Expect = 7e-22
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGET--PFPCQYCPKAFTRKDHL 80
+ R H+GE P+ C C FT+ M H Q E F C +C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 81 VNHVRR-HTGESPH 93
H+R+ H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 73.3 bits (181), Expect = 9e-19
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 51 HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGES--PHKCTYCMKSFTRKEHL 108
R H+GE P+ C C FT+ + H+ + E+ C +C RK L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 109 TNHIR-QHT 116
H+R QH+
Sbjct: 62 GVHLRKQHS 70
Score = 71.8 bits (177), Expect = 4e-18
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGES--PHHCNYCAKSFTRKDHMVYHER-QH 59
H+GE P+ C C FT+ + H+ Q E+ HC +C RK + H R QH
Sbjct: 10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Query: 60 TGETPF 65
+ P
Sbjct: 70 SYSGPS 75
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: g.37.1.1 g.37.1.1
Length = 72
Score = 80.2 bits (199), Expect = 2e-21
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 24 LVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNH 83
H+GE P+ C C K+F+R +V H+R HTGE P+ C C KAF++ L+NH
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 84 VRRHTGESPH 93
R HT
Sbjct: 62 QRIHTSGPSS 71
Score = 75.6 bits (187), Expect = 1e-19
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
H+GE P+ C C K F+R LV H R HTGE P+ C C K+F++ ++ H+R HT
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68
Query: 63 TPF 65
Sbjct: 69 PSS 71
Score = 74.4 bits (184), Expect = 3e-19
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
H+GE P+ C C KAF+R LV H R HTGE P+KC C K+F++ L NH R
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64
Query: 115 HT 116
HT
Sbjct: 65 HT 66
Score = 44.8 bits (107), Expect = 1e-07
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 80 LVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
H+GE P+ C C K+F+R L H R HT
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT 38
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 78.6 bits (195), Expect = 7e-21
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
H +H + P+ C+ C SF K ++ H+ HTGE P+ C C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 83 HVRRHTGESPH 93
H R H+GE P+
Sbjct: 64 HTRIHSGEKPY 74
Score = 74.4 bits (184), Expect = 4e-19
Identities = 22/66 (33%), Positives = 32/66 (48%)
Query: 51 HMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTN 110
H +H + P+ C C +F K +L +H HTGE P++C C F R +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 111 HIRQHT 116
H R H+
Sbjct: 64 HTRIHS 69
Score = 74.0 bits (183), Expect = 6e-19
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+ P++CD C +F K +L +H HTGE P+ CN C F R ++ H R H+GE
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71
Query: 63 TPF 65
P+
Sbjct: 72 KPY 74
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 78.7 bits (195), Expect = 9e-21
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 31 HTGESPHHCNY--CAKSFTRKDHMVYHER-QHTGETPFPCQY--CPKAFTRKDHLVNHVR 85
+G S C++ C + F+ + ++ +H++ QH + F C C K+F K HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 86 RHTGESPHKCTYCMKSF 102
H+ + C + S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 78.0 bits (193), Expect = 1e-20
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVR-QHTGESPHHCNY--CAKSFTRKDHMVYHER 57
+G + CD+ C + F+ +++L +H + QH + C C KSF K H+ H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 58 QHTGETPFPCQYCPKAF 74
H+ + C++ +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 65.3 bits (160), Expect = 2e-15
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 59 HTGETPFPCQY--CPKAFTRKDHLVNHVR-RHTGESPHKCTY--CMKSFTRKEHLTNHIR 113
+G + PC + C + F+ + +L +H + +H + C C KSF K+HL H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 114 QHT 116
H+
Sbjct: 62 LHS 64
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 75.6 bits (187), Expect = 1e-19
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+ P +C C+ + + K L H R H + P CNYC+ + ++ H ++ G+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Query: 63 TPFPC 67
P
Sbjct: 64 MSGPS 68
Score = 74.1 bits (183), Expect = 5e-19
Identities = 15/60 (25%), Positives = 25/60 (41%)
Query: 57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ P C C + + K L H R H + P KC YC + +L+ H+++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 74.1 bits (183), Expect = 5e-19
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
+ P C+ C+ S + K + HER H + PF C YC + +L H+++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 89 GE 90
G+
Sbjct: 62 GD 63
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 72.3 bits (178), Expect = 3e-18
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 9 HRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETP 64
+ C + C K F + L H HT + P+ C + C K F+ + HE+ H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 65 FPCQYCPKAFTRKDHLVNHVRR 86
C + HV
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAE 83
Score = 71.1 bits (175), Expect = 1e-17
Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 37 HHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESP 92
+ C++ C K+F + + + H+ HT + P+ C + C K F+ L H + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 93 HKCTYCMKSFTRKEHLTNHIR 113
K C H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 49.5 bits (119), Expect = 2e-09
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 66 PCQYCPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
+ C KAF + + L H HT + P++C + C K F+ L H + H
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57
Score = 46.8 bits (112), Expect = 2e-08
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHER 57
HT + P+ C + C K F+ L H + H G + C+ + H
Sbjct: 26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 29.1 bits (66), Expect = 0.13
Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 93 HKCTY--CMKSFTRKEHLTNHIRQHT 116
+ C + C K+F + L H HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 70.5 bits (173), Expect = 1e-17
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHT---GESPHHCNYCAKSFTRKDHMVYHERQH 59
+G + +C+ C T +K L H R+H C +C K F + D + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 60 TGETPFPCQYCPK 72
Q
Sbjct: 62 HPALLLAPQESSG 74
Score = 69.0 bits (169), Expect = 6e-17
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHT---GETPFPCQYCPKAFTRKDHLVNHVRRH 87
+G S C C + +K + +H+R+H FPC++C K F + D + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 88 TGESPHKC 95
Sbjct: 62 HPALLLAP 69
Score = 66.7 bits (163), Expect = 5e-16
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHT---GESPHKCTYCMKSFTRKEHLTNHIRQH 115
+G + C+ C +K L H R+H C +C K F + + + H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 42.4 bits (100), Expect = 1e-06
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHTVRR 119
+G S +C C + +K L H R+H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV 34
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex,
double helix, transcription/DNA complex; HET: DNA;
2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 69.1 bits (170), Expect = 3e-17
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVR--QHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
GE +RC C++ +T + H + C +C K FTRKD+M H +
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 61 G 61
Sbjct: 65 K 65
Score = 68.7 bits (169), Expect = 5e-17
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVR--RHTGESPHKCTYCMKSFTRKEHLTNHIR 113
E GE + C+ C + +T + H + C +C K FTRK+++T H++
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 114 QHT 116
Sbjct: 62 IIH 64
Score = 68.7 bits (169), Expect = 5e-17
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHER--QHTGETPFPCQYCPKAFTRKDHLVNHVRR 86
GE + C C++ +T + H +PC +C K FTRKD++ HV+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 87 HTG 89
Sbjct: 63 IHK 65
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 68.7 bits (169), Expect = 4e-17
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGE 90
C C ++F R++H+ H R HT E P+PC C +AFTR+D L+ H ++ H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 68.3 bits (168), Expect = 7e-17
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHE-RQHTGET 63
C+ C + F R+EHL H R HT E P+ C C ++FTR+D ++ H + H+G
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 62.5 bits (153), Expect = 1e-14
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI-RQHT 116
F C+ C +AF R++HL H R HT E P+ C C ++FTR++ L H + H+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 40.2 bits (95), Expect = 6e-06
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHV-RQHTGE 34
HT E P+ C C + FTR++ L+ H + H+G
Sbjct: 25 HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 65.8 bits (161), Expect = 7e-16
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 18 FTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFT 75
+L+N+V P+ C C + F+R D + H R HTG+ PF C+ C + F+
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 76 RKDHLVNHVRRHT 88
R DHL H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 65.4 bits (160), Expect = 1e-15
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 55 HERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHI 112
P+ C C + F+R D L H+R HTG+ P +C CM++F+R +HLT HI
Sbjct: 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69
Query: 113 RQHT 116
R HT
Sbjct: 70 RTHT 73
Score = 58.5 bits (142), Expect = 5e-13
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
P+ C C + F+R + L H+R HTG+ P C C ++F+R DH+ H R HT
Sbjct: 14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 60.7 bits (148), Expect = 6e-14
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKCTYCMKSFT 103
+ P+ CQ C K F+R DHL H+++ HT E PHKC + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 56.0 bits (136), Expect = 3e-12
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFT 47
+ P+ C C K F+R +HL H++Q HT E PH C +
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 55.7 bits (135), Expect = 4e-12
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPCQYCPKAFT 75
+ + P+ C C K F+R DH+ H +Q HT E P CQ +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 41.4 bits (98), Expect = 1e-06
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ-HT 116
+ + P+ C C K F+R +HL HI+Q HT
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 58.6 bits (141), Expect = 2e-12
Identities = 17/103 (16%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 19 TRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH-----ERQHTGETPFPCQYCPKA 73
+ + TG S C C+ ++ + H + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 74 FTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
RK L+ + + KC YC SF + L+ H+ +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 54.8 bits (131), Expect = 5e-11
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVR--QHTGESPHHCNYC---AKSFTRKDHMVYHER 57
TG + RC C+ + L H+ H + H + S RK ++ E
Sbjct: 14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG 73
Query: 58 QHTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
+ + C YC +F L H+ +
Sbjct: 74 KEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 57.4 bits (139), Expect = 2e-12
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 51 HMVYHERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCTY--CMKSFTRKE 106
+ + C + C K + + HL H R HTGE P C++ C + F R +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 107 HLTNHIRQH 115
L+ H R H
Sbjct: 64 ELSRHRRTH 72
Score = 56.2 bits (136), Expect = 4e-12
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 23 HLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQY--CPKAFTRKD 78
+ H C++ C K++ + H+ H R HTGE PF C + C + F R D
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 79 HLVNHVRRH 87
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 56.2 bits (136), Expect = 5e-12
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 3 HTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQ 58
+ H C + C KT+ + HL H R HTGE P C++ C + F R D + H R
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Query: 59 H 59
H
Sbjct: 72 H 72
Score = 37.8 bits (88), Expect = 6e-05
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 79 HLVNHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
+ H C++ C K++ + HL H R HT
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43
Score = 32.0 bits (73), Expect = 0.008
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 2 WHTGETPHRCDY--CAKTFTRKEHLVNHVRQH 31
HTGE P C + C + F R + L H R H
Sbjct: 41 THTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 56.0 bits (136), Expect = 3e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE P+ C C K F+RKD LV+H + H+G+S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 52.1 bits (126), Expect = 8e-11
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE+P+ C C K F+RKD +V H++ H+G++
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 51.3 bits (124), Expect = 2e-10
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P+ C C K F+RK+ LV+H + H+G+S
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 43.3 bits (103), Expect = 2e-07
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE+P++C C K F+RK+ L +H + H+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-12
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C C K F R HL+ H++RH E +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P+ CN C K+F R H++ H ++H E
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 49.1 bits (118), Expect = 1e-09
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P+ C+ C K F R HL+ H+++H E +
Sbjct: 7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P+ C C K+F R HL H+++H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-12
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF+RK L++H R H GE P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 52.5 bits (127), Expect = 6e-11
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE+P+ C+ C K+F+RK ++ H+R H GE P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 50.6 bits (122), Expect = 4e-10
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K F+RK L++H R H GE P +
Sbjct: 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE+P++C C K+F+RK L +H R H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAFTRK L H + HTGE +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 52.5 bits (127), Expect = 8e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C+ C K+FTRK + H++ HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 50.2 bits (121), Expect = 6e-10
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C C K FTRK L H + HTGE +
Sbjct: 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 44.4 bits (106), Expect = 8e-08
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC+ C K+FTRK L H + HT
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 8e-12
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C KAF K +L+ H R HTGE P +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P C+ C K+F K +++ H+R HTGE P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 6e-09
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P C C K F K +L+ H R HTGE P
Sbjct: 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 3e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P +C+ C K+F K +L H R HT
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 8e-12
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE + C C KAF RK L+ H R HTGE P +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 7e-11
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE + C+ C K+F RK ++ H+R HTGE P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 6e-10
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE + C C K F RK L+ H R HTGE P +
Sbjct: 7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 5e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE ++C+ C K+F RK L H R HT
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 45
Score = 54.9 bits (133), Expect = 9e-12
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG+ PF C +C K+F K +LV H R HTGE +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 53.7 bits (130), Expect = 2e-11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TG+ P C +C KSF K ++V H+R HTGE P
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 49.5 bits (119), Expect = 9e-10
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG+ P C +C K+F K +LV H R HTGE +
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 43.7 bits (104), Expect = 2e-07
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TG+ P +CT+C KSF K +L H R HT
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 54.8 bits (133), Expect = 9e-12
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG P+ C C K F+ K L+ H R HTG P +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-11
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TG P+ C+ CAK+F+ K ++ H+R HTG P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 50.2 bits (121), Expect = 5e-10
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG P+ C CAKTF+ K L+ H R HTG P +
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TG P+ C+ C K+F+ K L H R HT
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 9e-12
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C C K + R+ L H R HTGE +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ +GE P+ C C K + R+ + +H+R HTGE
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 49.8 bits (120), Expect = 8e-10
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P++C C K + R+ L H R HTGE +
Sbjct: 7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 44.8 bits (107), Expect = 8e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ +GE P+KC C K + R+ L H R HT
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 54.8 bits (133), Expect = 9e-12
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
+GE P+ C C KAF RKD L++H R H GES
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 52.1 bits (126), Expect = 8e-11
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE+P+ C+ C K+F RKD ++ H+R H GE+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 51.7 bits (125), Expect = 1e-10
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
+GE P+ C C K F RK+ L++H R H GES
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 42.5 bits (101), Expect = 4e-07
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE+P++C+ C K+F RK+ L +H R H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 1e-11
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C+ C KAF + HL +H+R HTGE P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 7e-10
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P C C K+F + H+ H R HTGE P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P +C C K F + HL +H+R HTGE P +
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 4e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P KC C K+F + HL +H+R HT
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.5 bits (132), Expect = 1e-11
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C KAFT+K HL H + HTGE P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C C+K+FT+K H+ H++ HTGE P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 6e-10
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C+K FT+K HL H + HTGE P +
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+FT+K HL H + HT
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 54.5 bits (132), Expect = 1e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE + C+ C K+F+R L+ H R H+GE P +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 52.9 bits (128), Expect = 4e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE ++C C KSF+R ++ HER H+GE P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE + C C K+F+R L+ H R H+GE P +
Sbjct: 7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 1e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE + C C KSF+R L H R H+
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAFT + +L+ H + HT + P +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C C K+FT + +++ H++ HT + P
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 49.8 bits (120), Expect = 9e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K FT + +L+ H + HT + P +
Sbjct: 7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-07
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+ C C K+FT + +L H + HT
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 54.4 bits (132), Expect = 1e-11
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TG P+ C C KAF K +L+ H R HTGES
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 52.5 bits (127), Expect = 7e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TG P+ CN C K+F K +++ H R HTGE+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TG P+ C+ C K F K +L+ H R HTGES
Sbjct: 7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.9 bits (102), Expect = 3e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TG P+ C C K+F K +L H R HT
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-11
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C YC KAF LV H R HTGE P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P+ C+YC K+F +V H+R HTGE P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 7e-10
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P+ CDYC K F LV H R HTGE P +
Sbjct: 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 7e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P+ C YC K+F L H R HT
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-11
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C+ C K FT+ HL +H R HTGE P +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P C C K FT+ H+ H+R HTGE P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 49.9 bits (120), Expect = 8e-10
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P +C+ C K FT+ HL +H R HTGE P +
Sbjct: 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P +C C K FT+ HL +H R HT
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.0 bits (131), Expect = 2e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C C KAF R HL H R HTG P +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P+ C+ C K+F R H+ H R HTG P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 49.0 bits (118), Expect = 2e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P++C C K F R HL H R HTG P +
Sbjct: 7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P+KC+ C K+F R HL H R HT
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-11
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG F C C KAFTRK L H + HTGE P +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 1e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TG C C K+FTRK + H++ HTGE P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG C C K FTRK L H + HTGE P +
Sbjct: 7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 1e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TG +CT C K+FTRK L+ H + HT
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-11
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ CQ C KAF HLV H H+GE P +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C C K+F H+V H H+GE P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C C K F HLV H H+GE P +
Sbjct: 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 42.1 bits (100), Expect = 6e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K+F HL H H+
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.0 bits (131), Expect = 2e-11
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE P+ C C KAFT + +L+ H + HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 51.3 bits (124), Expect = 2e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
TGE P+ C C K+FT + +++ H++ HTGE P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 7e-10
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K FT + +L+ H + HTGE P +
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 43.2 bits (103), Expect = 3e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+ CT C K+FT + +L H + HT
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 54.1 bits (131), Expect = 2e-11
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C KAF++ HL+ H R HTGE P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-10
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C C K+F++ H++ H+R HTGE P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K F++ HL+ H R HTGE P +
Sbjct: 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 9e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+F++ HL H R HT
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 55.4 bits (133), Expect = 2e-11
Identities = 23/95 (24%), Positives = 31/95 (32%), Gaps = 21/95 (22%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
+ C +TF+ LV HV H G + + C
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW----------------- 62
Query: 62 ETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
C K+F K LVNH+R HTGE +
Sbjct: 63 ---EECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 47.3 bits (112), Expect = 2e-08
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHK--------CTYCMKSFTRKEHLT 109
+ P + C + F+ LV HV H G C KSF K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 110 NHIRQHT 116
NHIR HT
Sbjct: 80 NHIRVHT 86
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C+ C K FT+ L +H R HTGE P +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ +GE P C C K FT+ + H+R HTGE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P +C+ C K FT+ L +H R HTGE P +
Sbjct: 7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ +GE P KC C K FT+ L +H R HT
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 53.6 bits (130), Expect = 2e-11
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE P+ C C KAF K +L+ H R HTGES
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 52.5 bits (127), Expect = 6e-11
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K+F K +++ H+R HTGE+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 48.2 bits (116), Expect = 3e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P+ C+ C K F K +L+ H R HTGES
Sbjct: 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 42.5 bits (101), Expect = 5e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+F K +L H R HT
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C K++ ++ HL H R HTGE P +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-10
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P C C KS+ ++ H+ H+R HTGE P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 9e-10
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P +C C K++ ++ HL H R HTGE P +
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 3e-07
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P KC C KS+ ++ HLT H R HT
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
GE P+ C C KAF+ K +L+ H+R H+GE P +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 52.2 bits (126), Expect = 8e-11
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ GE P+ C+ C K+F+ K +++ H R H+GE P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 47.5 bits (114), Expect = 7e-09
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
GE P+ C C K F+ K +L+ H+R H+GE P
Sbjct: 7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-07
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ GE P+ C+ C K+F+ K +L H+R H+
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C K+F+ L H R HTGE P +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P C C KSF+ + H+R HTGE P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-09
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P C C K+F+ L H R HTGE P
Sbjct: 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 3e-07
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P +C C KSF+ L H R HT
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C+ C K F +H R H+GE P +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 51.8 bits (125), Expect = 1e-10
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
+ +GE P C C K F H+R H+GE P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-09
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P +C+ C K F +H R H+GE P +
Sbjct: 7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ +GE P KC C K F +H R H+
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
G+ F C C K FT+ L H R HTGE P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
G+ CN C K+FT+ + H+R HTGE P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 6e-10
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
G+ +C+ C KTFT+ L H R HTGE P +
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
G+ KC C K+FT+ LT H R HT
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K+F +K HL H R HTGE P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C KSF +K H+ H R HTGE P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 8e-10
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C+ C K+F +K HL H R HTGE P +
Sbjct: 7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-07
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+ C C KSF +K HL H R HT
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C K FT K +L+ H + HTGE P +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 52.9 bits (128), Expect = 5e-11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE+P C+ C K FT K +++ H++ HTGE P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 49.0 bits (118), Expect = 1e-09
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P C C K FT K +L+ H + HTGE P +
Sbjct: 7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 44.0 bits (105), Expect = 1e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE+P C+ C K FT K +L H + HT
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C K F+R+ L H + HTGE P +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P C C K F+R+ + H + HTGE P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 1e-08
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P +C C K F+R+ L H + HTGE P +
Sbjct: 7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 2e-07
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P KC C K F+R+ L H + HT
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C C K FT+ HL NH R HTGE P +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ +GE P+ CN C K FT+ H+ H R HTGE P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 8e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P++C+ C K FT+ HL NH R HTGE P +
Sbjct: 7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ +GE P+KC C K FT+ HLTNH R HT
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 2e-11
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C K+F + L H HT E P +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P C+ C KSF + + H HT E P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-09
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P +CD C K+F + L H HT E P +
Sbjct: 7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 44.0 bits (105), Expect = 1e-07
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P KC C KSF + L H HT
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P C C K+F + HL+ H R HTGE P +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 9e-11
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE PH CN C KSF + H++ H+R HTGE P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 9e-10
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE PH+C+ C K+F + HL+ H R HTGE P +
Sbjct: 7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-07
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE PHKC C KSF + HL H R HT
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.6 bits (130), Expect = 3e-11
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K F R HL H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 7e-10
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C+ C K F R H+ H+ HTGE P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 8e-10
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C C K F R HL H HTGE P +
Sbjct: 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 15/34 (44%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K F R HL H HT
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF HL H+R HT E+ +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 49.8 bits (120), Expect = 8e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ CN C K+F H+ H R HT ET
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 47.1 bits (113), Expect = 8e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C+ C K F HL H+R HT E+ +
Sbjct: 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 42.5 bits (101), Expect = 4e-07
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+ C C K+F HL H+R HT
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C C K F R+ HL H+R H+ E +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P +C+ C K F R+ HL H+R H+ E +
Sbjct: 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P CN C K F R+ H+ H R H+ E
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 43.3 bits (103), Expect = 3e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P KC C K F R+ HL H+R H+
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C K + K +L H + HTGE P +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C C K + K ++ H++ HTGE P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 49.1 bits (118), Expect = 2e-09
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K + K +L H + HTGE P +
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K + K +L H + HT
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-11
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+ E P+ C+ C K + R+ +L H R H GE +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ + E P+ C C K + R+ ++ H+R H GE
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+ E P++C+ C K + R+ +L H R H GE +
Sbjct: 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 44.4 bits (106), Expect = 9e-08
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ + E P+KC C K + R+ +L H R H
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-11
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P C C KAF K L+ H R H + +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P C C K+F K ++ H+R H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 50.3 bits (121), Expect = 6e-10
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P +C C K F K L+ H R H + +
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 43.3 bits (103), Expect = 3e-07
Identities = 15/34 (44%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P KCT C K+F K L H R H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K+FT K L H + HTGE +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 50.6 bits (122), Expect = 3e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C+ C KSFT K + H++ HTGE
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 49.1 bits (118), Expect = 1e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C C K+FT K L H + HTGE +
Sbjct: 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 44.1 bits (105), Expect = 1e-07
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC+ C KSFT K L H + HT
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
GE + C C K F++ HL H R HTGE P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
GE + C+ C K F++ H+ H+R HTGE P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 5e-10
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
GE ++CD C K F++ HL H R HTGE P +
Sbjct: 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE +KC C K F++ HL H R HT
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-11
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF +K +L H R HTGE P +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C C K+F +K ++ H+R HTGE P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-09
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+RC C K F +K +L H R HTGE P +
Sbjct: 7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P++C C K+F +K +LT H R HT
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 53.3 bits (129), Expect = 4e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C K F + L H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 7e-10
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C C K F + + H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 5e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K F + L H HTGE P +
Sbjct: 7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC C K F + L H HT
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 4e-11
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K FT+ HL NH R HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-10
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K FT+ H+ H+R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K FT+ HL NH R HTG P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 42.5 bits (101), Expect = 5e-07
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K FT+ HL NH R HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 4e-11
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K+FT+K L H + HTGE P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C+ C KSFT+K + H++ HTGE P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K+FT+K L H + HTGE P +
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 8e-07
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C+ C KSFT+K L H + HT
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 52.9 bits (128), Expect = 4e-11
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE PF C C KAF+ K +L+ H + H E P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 52.5 bits (127), Expect = 7e-11
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P C C K F+ K +L+ H + H E P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 52.2 bits (126), Expect = 9e-11
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P C+ C K+F+ K +++ H++ H E P
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 42.9 bits (102), Expect = 3e-07
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P C+ C K+F+ K +L H + H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 44
Score = 52.9 bits (128), Expect = 4e-11
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
+GE P+ C C KAF K L+ H R H G S
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 49.8 bits (120), Expect = 7e-10
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ +GE P+ CN C K+F K ++ HER H G +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.9 bits (115), Expect = 5e-09
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
+GE P+ C+ C K F K L+ H R H G S
Sbjct: 7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 40.6 bits (96), Expect = 2e-06
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ +GE P++C C K+F K L H R H
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 4e-11
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE P+ C C K+F +K L H R HTGE+P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 52.2 bits (126), Expect = 1e-10
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C+ C KSF +K + H+R HTGE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K+F +K L H R HTGE+P +
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 43.3 bits (103), Expect = 2e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C+ C KSF +K L H R HT
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 4e-11
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE P+ C C KAFT + +L H + HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 6e-10
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C C K+FT + ++ H++ HTGE P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 7e-09
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P+RC C K FT + +L H + HTGE P
Sbjct: 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+FT + +L H + HT
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 52.9 bits (128), Expect = 4e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG+ P+ C C KAF K L+ H R HTGE P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 1e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TG+ P+ C C K+F K ++ H R HTGE P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 2e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG+ P+ C C K F K L+ H R HTGE P +
Sbjct: 7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 41.8 bits (99), Expect = 9e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TG+ P++C C K+F K L H R HT
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 5e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF + L H H+GE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K+F + + H+ H+GE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K F + L H H+GE P +
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 41.4 bits (98), Expect = 1e-06
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K+F + L H H+
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 52.9 bits (128), Expect = 5e-11
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
G P+ C C K+F+ K L+ H R HT E P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 51.0 bits (123), Expect = 3e-10
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
G +P+ C+ C KSF+ K ++ H+R HT E P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 49.8 bits (120), Expect = 8e-10
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
G P++C C K+F+ K L+ H R HT E P +
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 43.7 bits (104), Expect = 2e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
G +P+KC+ C KSF+ K L H R HT
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 52.9 bits (128), Expect = 5e-11
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE + C C K F+R L H + HTGE P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 5e-10
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE + CN C K F+R + H++ HTGE P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 2e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE ++C+ C K F+R L H + HTGE P +
Sbjct: 7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 7e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE +KC C K F+R L+ H + HT
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 52.7 bits (127), Expect = 6e-11
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 55 HERQHTGETPFPCQY--CPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C + C F+R D L H R H+G P +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 51.1 bits (123), Expect = 2e-10
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 26 NHVRQHTGESPHHCNY--CAKSFTRKDHMVYHERQHTGETPFPCQ 68
+ TGE P C + C F+R D + H R H+G P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 47.3 bits (113), Expect = 8e-09
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 2 WHTGETPHRCDY--CAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P C + C F+R + L H R H+G P +
Sbjct: 6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 44.6 bits (106), Expect = 8e-08
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 82 NHVRRHTGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
+ TGE P CT+ C F+R + L+ H R H+
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-11
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE P+ C C K F++K L H R HTGE P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 2e-10
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P+ CN C K+F++K + H+R HTGE P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 49.5 bits (119), Expect = 1e-09
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE P+ C+ C KTF++K L H R HTGE P +
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 5e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P+ C C K+F++K L+ H R HT
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-11
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K FT+ HLV H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 5e-10
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ CN C K FT+ H+V H HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 2e-09
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K FT+ HLV H HTGE P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 8e-07
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC C K FT+ HL H HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-11
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF +L H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 2e-09
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K+F ++ H+ HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K F +L H HTGE P +
Sbjct: 7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 4e-07
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K+F +LT H HT
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-11
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE + C C KAF +K L H R H GE P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE + C+ C K+F +K + H+R H GE P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE + C C K F +K L H R H GE P +
Sbjct: 7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 41.7 bits (99), Expect = 9e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE ++C+ C K+F +K L+ H R H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 52.5 bits (127), Expect = 8e-11
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
GE + C+ C F++ L H H GE P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 49.5 bits (119), Expect = 1e-09
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
GE C C F++ + H+ H GE P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 47.9 bits (115), Expect = 4e-09
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
GE +C C F++ L H H GE P +
Sbjct: 7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 42.5 bits (101), Expect = 4e-07
Identities = 9/34 (26%), Positives = 11/34 (32%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE KC C F++ L H H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 8e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG P+ C C KAF++ L H R HTGE P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 7e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TG P+ CN C K+F++ + H+R HTGE P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG P++C+ C K F++ L H R HTGE P +
Sbjct: 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TG P++C C K+F++ L H R HT
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 8e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P C+ C K+F+ L+ H R HTGE+P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 51.0 bits (123), Expect = 2e-10
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE PH C C KSF+ ++ H+R HTGE P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 49.1 bits (118), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE PH C C K+F+ L+ H R HTGE+P +
Sbjct: 7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 42.1 bits (100), Expect = 8e-07
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE PH+C C KSF+ L H R HT
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 8e-11
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 54 YHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K FT+ HL H R HTG P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K FT+ H+ H R HTG P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K FT+ HL H R HTG P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-06
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K FT+ HL H R HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 52.2 bits (126), Expect = 8e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C K+F L+ H R H+GE P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 49.9 bits (120), Expect = 8e-10
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P++C C KSF ++ H+R H+GE P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K+F L+ H R H+GE P +
Sbjct: 7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 41.0 bits (97), Expect = 2e-06
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+ C C KSF L H R H+
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TG+ P+ C C K FT+ HL H HTGE P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TG+ P+ CN C K FT+ H+ H HTGE P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG+ P++C+ C K FT+ HL H HTGE P +
Sbjct: 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 1e-06
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TG+ P+KC C K FT+ HL H HT
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-11
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF+ + L H HTG+ P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K+F+ + + H+ HTG+ P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C+ C K F+ + L H HTG+ P +
Sbjct: 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 41.7 bits (99), Expect = 1e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+F+ + LT H HT
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C+ C KAF L H R HTGE P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P++C C K+F + H+R HTGE P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C+ C K F L H R HTGE P +
Sbjct: 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 5e-07
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+ C C K+F L H R HT
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-11
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K FT+ HL H HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 9e-10
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ CN C K FT+ H+ H HTGE P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K FT+ HL H HTGE P +
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 1e-06
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C K FT+ HL H HT
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-11
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF++ L H R HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 5e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ CN C K+F++ + H+R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-09
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K F++ L H R HTGE P +
Sbjct: 7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 9e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC C K+F++ L H R HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 9e-11
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
+G+ P+ C+ C K F + HL H R HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 50.6 bits (122), Expect = 4e-10
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+G+ P+ C C K+F + H+ H+R HTGE
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 49.8 bits (120), Expect = 7e-10
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+G+ P+ C C KTF + HL H R HTGE +
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 42.1 bits (100), Expect = 7e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+G+ P++C C K+F + HL H R HT
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 1e-10
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K F +L H R HTGE P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 6e-10
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ CN C K F ++ H+R HTGE P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-09
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C+ C K F +L H R HTGE P +
Sbjct: 7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC C K F +L+ H R HT
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 1e-10
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE PF C C KAF+ L H R HTGE P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 1e-09
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P C C K+F+ + H R HTGE P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 5e-08
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P C C K F+ L H R HTGE P +
Sbjct: 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 8e-07
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P C C K+F+ L H R HT
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-10
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
GE P+ C C K+F+ L H HT E P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-09
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
GE P++C C K+F+ L H HT E P +
Sbjct: 7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-09
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
GE P+ C+ C KSF+ + H HT E P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 42.9 bits (102), Expect = 3e-07
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE P++C+ C KSF+ LT H HT
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 1e-10
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C K+F L H R HTGE P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 6e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQ 68
TGE P+ C+ C KSF + H+R HTGE P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 2e-09
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++CD C K+F L H R HTGE P +
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 4e-07
Identities = 16/34 (47%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P+KC C KSF LT H R HT
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 1e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF+ + L H R H+G+ P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 49.8 bits (120), Expect = 6e-10
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C+ C K+F+ + + H+R H+G+ P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 47.9 bits (115), Expect = 5e-09
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ C C K F+ ++ L H R H+G+ P +
Sbjct: 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 41.7 bits (99), Expect = 1e-06
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C+ C K+F+ ++ L+ H R H+
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-10
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF H R HTG+ P +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 50.3 bits (121), Expect = 6e-10
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TGE P+ C C K+F H+R HTG+ P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 47.2 bits (113), Expect = 8e-09
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P++C C K F H R HTG+ P +
Sbjct: 7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 42.2 bits (100), Expect = 7e-07
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TGE P+KC C K+F T H R HT
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-10
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TG P+ C C KAF+ L H HTGE P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ TG P+ CN C K+F+ + H+ HTGE P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 5e-09
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TG P+ C+ C K F+ L H HTGE P +
Sbjct: 7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 7e-07
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ TG P+ C C K+F+ LT H HT
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-10
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
TGE P+ C C KAF+ L H R H+GE P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 49.0 bits (118), Expect = 2e-09
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P+ C+ C K+F+ + H+R H+GE P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 5e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
TGE P+ CD C K F+ L H R H+GE P +
Sbjct: 7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 41.3 bits (98), Expect = 1e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P++C C K+F+ LT H R H+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 51.0 bits (123), Expect = 3e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ + H C+ C + FT K H+ H+R HTGE P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 4e-10
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+ C C + FT K HL H R HTGE P +
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-09
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
+ H+C C + FT K HL H R HTGE P
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 1e-07
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ + H+C C + FT K HL H R HT
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 51.0 bits (123), Expect = 3e-10
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRR-HTGESPHKCT 96
TG+ P+ C C KAF + L+ H R HTGE P +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 49.1 bits (118), Expect = 2e-09
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQ-HTGETPFPC 67
+ TG+ P+ C C K+F + ++ H R HTGE P
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 46.0 bits (110), Expect = 2e-08
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQ-HTGESPHHCN 40
TG+ P+ C C K F + L+ H R HTGE P +
Sbjct: 7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 39.5 bits (93), Expect = 6e-06
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ-HT 116
+ TG+ P++C C K+F + L H R HT
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 50.7 bits (122), Expect = 4e-10
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
TGE PF C+ C F+ L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 46.8 bits (112), Expect = 1e-08
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
TGE P C C +F+ + H R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 46.8 bits (112), Expect = 1e-08
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
TGE P +C C F+ L H+R H P
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 41.8 bits (99), Expect = 1e-06
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
TGE P +C C +F+ L H+R H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 50.6 bits (122), Expect = 4e-10
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
GE C C K F + + + H R HTGE P +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 6e-10
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+ GE H C+ C K F + + + H R HTGE P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 5e-09
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
GE HRC C K F + + + H R HTGE P +
Sbjct: 7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 3e-07
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ GE H+C+ C K F + + H R HT
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 42
Score = 49.5 bits (119), Expect = 1e-09
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
GE P+ C+ C K+F++K ++ H R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 49.1 bits (118), Expect = 1e-09
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
GE P+ C C KAF++K L+ H+R HTG P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 46.0 bits (110), Expect = 2e-08
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
GE P+RCD C K F++K L+ H+R HTG P
Sbjct: 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 43.7 bits (104), Expect = 2e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE P++C C K+F++K L HIR HT
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 49.0 bits (118), Expect = 1e-09
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
GE P+PC+ C F L +H+R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 46.0 bits (110), Expect = 2e-08
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
GE P+ C C F + H R HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 45.6 bits (109), Expect = 3e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
GE P+ C+ C F + L +H+R HTG P
Sbjct: 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.5 bits (101), Expect = 4e-07
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE P+ C C F + L +H+R HT
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 48.7 bits (117), Expect = 2e-09
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
T + C C KAFTR HL H + HT +S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 47.6 bits (114), Expect = 6e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
T ++CN C K+FTR H+ H++ HT ++
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 43.7 bits (104), Expect = 2e-07
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
T + C+ C K FTR HL H + HT +S
Sbjct: 7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 42.2 bits (100), Expect = 7e-07
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
T + C C K+FTR HLT H + HT
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 48.7 bits (117), Expect = 2e-09
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
GE P+ C+ C F + HL HV HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 46.7 bits (112), Expect = 1e-08
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
GE P++C+ C F + HL HV HTG P
Sbjct: 6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 46.4 bits (111), Expect = 1e-08
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
GE P+ C C F + H+ H HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 44.4 bits (106), Expect = 9e-08
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE P+KC C F + HL H+ HT
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 47.8 bits (113), Expect = 6e-09
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 9 HRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+ C+ C + L H+R HT P+HC YC SF K ++ H +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 47.4 bits (112), Expect = 1e-08
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 39 CNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGE 90
C C + + H R HT P+ C YC +F K +L H++
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 45.9 bits (108), Expect = 4e-08
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 67 CQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
C+ C + L H+R HT P+ CTYC SF K +LT H++
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 35.1 bits (80), Expect = 4e-04
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
HT P+ C YC +F K +L H++
Sbjct: 24 HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
PDB: 2yta_A
Length = 42
Score = 47.3 bits (113), Expect = 7e-09
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHK 94
GETP+ C C K+FT++ L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 47.3 bits (113), Expect = 8e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
GE+P+ C C KSFT++ + H+R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 45.7 bits (109), Expect = 3e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
GETP+ C C K+FT++ L H R + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 40.0 bits (94), Expect = 5e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
GE+P+ C C KSFT++ L H R +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 46.8 bits (112), Expect = 9e-09
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPF 65
+G+ + C C KSF +K + HER HTG P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 46.4 bits (111), Expect = 1e-08
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
+G+ + CQ C K+F +K L H R HTG P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 45.3 bits (108), Expect = 4e-08
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
+G+ + C C K+F +K L H R HTG P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 41.0 bits (97), Expect = 2e-06
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+G+ ++C C KSF +K LT H R HT
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT 34
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 46.4 bits (111), Expect = 1e-08
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE H C+ C K+F + H+R H GE
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 44.5 bits (106), Expect = 1e-07
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCT 96
+GE C C K F L H R H GE +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 44.5 bits (106), Expect = 1e-07
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCN 40
+GE H CD C K F L H R H GE +
Sbjct: 7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 40.3 bits (95), Expect = 4e-06
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE H C C K+F L H R H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 47.3 bits (112), Expect = 1e-08
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 23 HLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVN 82
+ H G+ C+ C F R+ + C+ C K ++ L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 83 HVRRHTGESPH 93
+G+
Sbjct: 58 DEGNESGKKTS 68
Score = 45.8 bits (108), Expect = 6e-08
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 7/63 (11%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
H G+ +C C F R+ + C C K ++ + E +G+
Sbjct: 13 HLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGNESGK 65
Query: 63 TPF 65
Sbjct: 66 KTS 68
Score = 44.7 bits (105), Expect = 1e-07
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 7/62 (11%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
++ H G+ C C F R+ + C C K ++ L
Sbjct: 9 RQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKDEGN 61
Query: 115 HT 116
+
Sbjct: 62 ES 63
Score = 32.3 bits (73), Expect = 0.008
Identities = 5/36 (13%), Positives = 11/36 (30%)
Query: 2 WHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
+ C+ C K ++ L +G+
Sbjct: 33 TLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 31.9 bits (72), Expect = 0.009
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 79 HLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNH 111
+ H G+ KC+ C F R+ L+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 46.5 bits (111), Expect = 1e-08
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKC 95
+GE P+ C C + F+ + LV H + HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 46.2 bits (110), Expect = 2e-08
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHC 39
+GE P+ C C +TF+ LV H + HT +S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 44.6 bits (106), Expect = 7e-08
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPC 67
+GE P+ C C ++F+ + +V H++ HT ++
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 39.6 bits (93), Expect = 6e-06
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+GE P+ C C ++F+ L H + HT
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 45.8 bits (109), Expect = 3e-08
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH 87
R TG PF C C ++F+R DHL H +RH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 43.1 bits (102), Expect = 3e-07
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 83 HVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTV 117
R TG P +C C +SF+R +HL H ++H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 39.6 bits (93), Expect = 5e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 27 HVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
R TG P C C +SF+R DH+ H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.4 bits (82), Expect = 2e-04
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQH 31
TG P +C C ++F+R +HL H ++H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 44.5 bits (105), Expect = 8e-08
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPH 93
GE PF C C + FT++++LV H R H +S
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 41.4 bits (97), Expect = 2e-06
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPH 37
GE P +C C + FT++ +LV H R H +S
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 40.6 bits (95), Expect = 2e-06
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 26 NHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
+ GE+P C+ C + FT+++++V HER H ++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 37.5 bits (87), Expect = 4e-05
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 82 NHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ GE+P KC+ C + FT++ +L H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 44.5 bits (104), Expect = 5e-07
Identities = 18/106 (16%), Positives = 29/106 (27%), Gaps = 6/106 (5%)
Query: 14 CAKTFTRKEHLVNHVRQHTGESPHHCN----YCAKSFTRKDHMVYHERQHTGETPFPCQY 69
T +E H + + +Y + F C
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPL 79
Query: 70 CPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
C F+ L H+R E C C K FT + +H+ +
Sbjct: 80 CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 36.5 bits (83), Expect = 5e-04
Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
+ C C F+ L H+R E C C K FT D + H +
Sbjct: 69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 31.4 bits (70), Expect = 0.038
Identities = 12/93 (12%), Positives = 27/93 (29%), Gaps = 4/93 (4%)
Query: 24 LVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNH 83
++ H G + + R + +++ + P+ + +
Sbjct: 10 SKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYR 65
Query: 84 VRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+ S C C+ F+ L HIR
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE 98
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 41.8 bits (98), Expect = 1e-06
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCA 43
C+ C K F HL H H+GE P+ +
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 41.8 bits (98), Expect = 1e-06
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 29 RQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYC 70
C C K F H+ H+ H+GE P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 39.5 bits (92), Expect = 7e-06
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 57 RQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYC 98
C+ C K F HL H H+GE P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.4 bits (76), Expect = 0.002
Identities = 8/32 (25%), Positives = 9/32 (28%)
Query: 85 RRHTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
C C K F HL H H+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS 36
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 42.1 bits (98), Expect = 1e-05
Identities = 6/60 (10%), Positives = 14/60 (23%)
Query: 56 ERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
+ + ++ V + ++C C L H+ H
Sbjct: 144 GSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.4 bits (78), Expect = 0.005
Identities = 5/53 (9%), Positives = 15/53 (28%)
Query: 7 TPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQH 59
+ + + ++ V + + C+ C+ + H H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 32.1 bits (72), Expect = 0.039
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQH 31
+ ++C C+ L HV H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.4 bits (70), Expect = 0.077
Identities = 7/46 (15%), Positives = 12/46 (26%)
Query: 42 CAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRH 87
+ ++ V + + C C L HV H
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 39.1 bits (90), Expect = 4e-05
Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Query: 33 GESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
+ + C C + HER C YC F + H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 93 HKCTYCMKSFTRKEHLTNH 111
C CM++F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 36.8 bits (84), Expect = 3e-04
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 5 GETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETP 64
+ ++C C + +H R + C YC+ F + HE + +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHESKCEYK-K 69
Query: 65 FPCQYCPKAFTRKDHLVNHVRR 86
C C + F + H
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVE 91
Score = 33.0 bits (74), Expect = 0.008
Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Query: 55 HERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQ 114
+ + C+ C + +H R + C YC F E H +
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHESK 64
Query: 115 HTVRR 119
++
Sbjct: 65 CEYKK 69
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 35.0 bits (81), Expect = 3e-04
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
C+ C + F R+EHL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 33.8 bits (78), Expect = 8e-04
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
F C+ C +AF R++HL H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 33.4 bits (77), Expect = 0.001
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQHT 116
C C ++F R+EHL H R HT
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHT 26
Score = 32.7 bits (75), Expect = 0.002
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
C C ++F R++H+ H R HT E
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNE 28
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 34.9 bits (81), Expect = 4e-04
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 64 PFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
PF C + C K FTR D L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 31.8 bits (73), Expect = 0.004
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 36 PHHCNY--CAKSFTRKDHMVYHERQHTGE 62
P C + C K FTR D + H+R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 31.8 bits (73), Expect = 0.005
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 8 PHRCDY--CAKTFTRKEHLVNHVRQHTGE 34
P C + C K FTR + L H R HTGE
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 30.7 bits (70), Expect = 0.013
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 92 PHKCTY--CMKSFTRKEHLTNHIRQHT 116
P CT+ C K FTR + L H R HT
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHT 28
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 33.1 bits (76), Expect = 0.002
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 4 TGETPHRCDY--CAKTFTRKEHLVNHVRQHTGE 34
+ H C C K + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 29.6 bits (67), Expect = 0.031
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 60 TGETPFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
+ C C K + + HL H+R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 28.9 bits (65), Expect = 0.060
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 32 TGESPHHCNY--CAKSFTRKDHMVYHERQHTGE 62
+ H C+ C K + + H+ H R HTGE
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36
Score = 28.5 bits (64), Expect = 0.078
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 88 TGESPHKCTY--CMKSFTRKEHLTNHIRQHT 116
+ H C C K + + HL H+R HT
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT 34
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 32.9 bits (74), Expect = 0.002
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 61 GETPFPCQYCPKAFTRKDHLVNHVRRHTGES 91
+T CQ C K F L+ H H GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 31.0 bits (69), Expect = 0.011
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 5 GETPHRCDYCAKTFTRKEHLVNHVRQHTGES 35
+T C C K F L+ H H GES
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
Score = 28.3 bits (62), Expect = 0.13
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 33 GESPHHCNYCAKSFTRKDHMVYHERQHTGET 63
++ C C K F ++ H+ H GE+
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGES 39
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 32.2 bits (72), Expect = 0.005
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHTG 89
+GE P+ C C F RKD + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.8 bits (71), Expect = 0.007
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHTG 61
+GE P+ C C F RKD M YH R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 29.5 bits (65), Expect = 0.047
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQH 115
+GE P+ C C F RK+ ++ H+R H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 29.5 bits (65), Expect = 0.049
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHTG 33
+GE P+ C C F RK+ + HVR H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc
finger, transcription; NMR {Homo sapiens}
Length = 29
Score = 31.3 bits (70), Expect = 0.009
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
P +C C K FT+ L+ HVRQHTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 30.5 bits (68), Expect = 0.017
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
P C C KAFT+ L+ HVR+HTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 28.6 bits (63), Expect = 0.074
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
P C C K+FT+ ++ H RQHTGE
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGE 28
Score = 26.7 bits (58), Expect = 0.46
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQHT 116
P +C C K+FT+ L H+RQHT
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHT 26
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.8 bits (66), Expect = 0.029
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 65 FPCQYCPKAFTRKDHLVNHVRRHTGE 90
F C+YC K F K L H+R HT E
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 28.7 bits (63), Expect = 0.083
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 11 CDYCAKTFTRKEHLVNHVRQHTGE 34
C+YC K F K L H+R HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 25.6 bits (55), Expect = 1.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 39 CNYCAKSFTRKDHMVYHERQHTGE 62
C YC K F K + H R HT E
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNE 35
Score = 25.2 bits (54), Expect = 1.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 95 CTYCMKSFTRKEHLTNHIRQHT 116
C YC K F K L H+R HT
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHT 33
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 29.5 bits (66), Expect = 0.038
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 65 FPCQYCPKAFTRKDHLVNHVRRHTGESPHK 94
F C CPK F R DHL H+ H +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 24.9 bits (54), Expect = 2.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 95 CTYCMKSFTRKEHLTNHIRQHTVRR 119
C C K F R +HL+ HI H +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLG 29
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.041
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHT 32
E +C+ C KTF+ ++L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 29.0 bits (64), Expect = 0.074
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
E KC C K+F+ ++LT H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.3 bits (62), Expect = 0.14
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
E CN C K+F+ ++ HER HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.5 bits (60), Expect = 0.24
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
E F C C K F+ +L H R HT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 29.1 bits (65), Expect = 0.053
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 65 FPCQYCPKAFTRKDHLVNHVRRHTGE 90
F C CPK F R DHL H+ H +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENK 28
Score = 24.9 bits (54), Expect = 1.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 95 CTYCMKSFTRKEHLTNHIRQHTVRR 119
C C K F R +HLT HI H ++
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENKK 29
Score = 22.9 bits (49), Expect = 8.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 11 CDYCAKTFTRKEHLVNHVRQHTGE 34
C C K F R +HL H+ H +
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENK 28
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 30.5 bits (68), Expect = 0.055
Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Query: 50 DHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVR-RHTG---ESPHKCTYCMKSFTRK 105
H ++++ E + C+YC + HV H S + C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 106 EHLTNHIRQH 115
+ L+ H ++
Sbjct: 64 DALSEHNLKY 73
Score = 30.5 bits (68), Expect = 0.061
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 22 EHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYH-ERQHTG---ETPFPCQYCPKAFTRK 77
H ++ + E + C YC + +H + +H + + C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 78 DHLVNHVRR-HTGESPHKCT 96
D L H + H GE K T
Sbjct: 64 DALSEHNLKYHPGEENFKLT 83
Score = 28.6 bits (63), Expect = 0.28
Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVR-QHTG---ESPHHCNYCAKSFTRKDHMVYH-ER 57
E + C YC HV +H S + C C R D + H +
Sbjct: 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK 72
Query: 58 QHTGETPFPCQ 68
H GE F
Sbjct: 73 YHPGEENFKLT 83
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 31.4 bits (70), Expect = 0.064
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 29/129 (22%)
Query: 11 CDYCAKTFTRKE-H--LVNHVRQHTGESPHHC------NYCAKSFTRKDHMVYH--ERQH 59
+ K H +V+H Y ++ H+ +H +H
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY---FYS---HIGHHLKNIEH 486
Query: 60 TGETP-FPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTR----KEHLTNHIRQ 114
F + F L +R H + + + + + K ++ ++ +
Sbjct: 487 PERMTLFRMVFLDFRF-----LEQKIR-HDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540
Query: 115 HTVRRVNDL 123
+ R VN +
Sbjct: 541 YE-RLVNAI 548
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 30.9 bits (69), Expect = 0.079
Identities = 16/121 (13%), Positives = 31/121 (25%), Gaps = 4/121 (3%)
Query: 1 MWHTGETPHRCDYCAKTFTRKEHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
W + +R + K + + +V N A + + +
Sbjct: 117 SWLIVDKNNRYKSIDGSDETKANWMRYVV--ISREEREQNLLAFQHSERIYFRACRDIRP 174
Query: 61 GE--TPFPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEHLTNHIRQHTVR 118
GE + + K H GE + + E L I +R
Sbjct: 175 GEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLR 234
Query: 119 R 119
+
Sbjct: 235 Q 235
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 28.7 bits (64), Expect = 0.088
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 83 HVRRHTGESPHK---CTY--CMKSFTRKEHLTNHIRQHTVRR 119
+ ++ E P K C + C K+F R+ ++ +HI+ H R
Sbjct: 6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 0.21
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 62 ETPFPCQY--CPKAFTRKDHLVNHVRRHTGE 90
+ F C + C K F R+ ++ +H++ H +
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 26.4 bits (58), Expect = 0.61
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 14 CAKTFTRKEHLVNHVRQHTGE 34
C KTF R+ ++ +H++ H +
Sbjct: 26 CTKTFKRRYNIRSHIQTHLED 46
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 28.2 bits (62), Expect = 0.11
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 59 HTGETPFPCQYCPKAFTRKDHLVNHVRRHT 88
+G+ PF C+ C AFT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 27.0 bits (59), Expect = 0.30
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 87 HTGESPHKCTYCMKSFTRKEHLTNHIRQHT 116
+G+ P C C+ +FT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 25.9 bits (56), Expect = 0.79
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 3 HTGETPHRCDYCAKTFTRKEHLVNHVRQHT 32
+G+ P C C FT K + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 23.9 bits (51), Expect = 3.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 31 HTGESPHHCNYCAKSFTRKDHMVYHERQHT 60
+G+ P C C +FT K + H + HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 27.8 bits (61), Expect = 0.15
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 65 FPCQYCPKAFTRKDHLVNHVR 85
F C CPK F R D L H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 24.7 bits (53), Expect = 2.0
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 94 KCTYCMKSFTRKEHLTNHIR 113
C C K F R + L+ HI+
Sbjct: 4 ACPACPKRFMRSDALSKHIK 23
Score = 23.1 bits (49), Expect = 8.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 11 CDYCAKTFTRKEHLVNHVR 29
C C K F R + L H++
Sbjct: 5 CPACPKRFMRSDALSKHIK 23
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.5 bits (60), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
P++C C+ K +L H+R+HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 27.5 bits (60), Expect = 0.25
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
P+ C C A K +L H+R+HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 24.0 bits (51), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
P+ C C+ + K ++ H R+HTGE
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGE 35
Score = 24.0 bits (51), Expect = 4.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQHT 116
P+KC C + K +L H+R+HT
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHT 33
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc
finger, classical zinc finger, transcription; NMR {Homo
sapiens}
Length = 30
Score = 26.3 bits (57), Expect = 0.57
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRHTGE 90
P+ C +C + F L HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 25.5 bits (55), Expect = 1.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQHTGE 34
P+ C +C + F L HVR HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 25.1 bits (54), Expect = 1.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQHTGE 62
P+ C +C + F + H R HTGE
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGE 29
Score = 23.9 bits (51), Expect = 4.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQHT 116
P+ C +C + F L H+R HT
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHT 27
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 66
Score = 26.7 bits (58), Expect = 0.74
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 65 FPCQYCPKAFTRKDHLVNHVRRH 87
PC C K FT + L H +H
Sbjct: 14 LPCGLCGKVFTDANRLRQHEAQH 36
Score = 25.2 bits (54), Expect = 3.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 39 CNYCAKSFTRKDHMVYHERQH 59
C C K FT + + HE QH
Sbjct: 16 CGLCGKVFTDANRLRQHEAQH 36
Score = 24.8 bits (53), Expect = 3.3
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 95 CTYCMKSFTRKEHLTNHIRQHTVRRVN----DLPP 125
C C K FT L H QH V + DLPP
Sbjct: 16 CGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLPP 50
Score = 24.4 bits (52), Expect = 5.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 11 CDYCAKTFTRKEHLVNHVRQH 31
C C K FT L H QH
Sbjct: 16 CGLCGKVFTDANRLRQHEAQH 36
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 26.8 bits (58), Expect = 1.2
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Query: 49 KDHMVYHERQHTGETPFPCQYCPKAFTRKDHLVNHVRRHTGESP 92
K HM E + CQ+C K F K L H P
Sbjct: 42 KKHM---EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 25.2 bits (55), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRR 86
+ C C +AFTR+D L+ H ++
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQK 24
Score = 23.3 bits (50), Expect = 6.4
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 36 PHHCNYCAKSFTRKDHMVYHERQ 58
+ C C ++FTR+D ++ H ++
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQK 24
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 25.5 bits (55), Expect = 1.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 4 TGETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
+ E H+C C + F + L+ H H G+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQ 38
Score = 25.2 bits (54), Expect = 1.7
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 32 TGESPHHCNYCAKSFTRKDHMVYHERQHTGE 62
+ E H C C + F + ++ H+ H G+
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQ 38
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc
finger, transcription; NMR {Homo sapiens}
Length = 26
Score = 24.7 bits (53), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 8 PHRCDYCAKTFTRKEHLVNHVRQH 31
P+ C+ C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 22.7 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 64 PFPCQYCPKAFTRKDHLVNHVRRH 87
P+ C+ C K F + L NH+R H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
Score = 22.7 bits (48), Expect = 9.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 92 PHKCTYCMKSFTRKEHLTNHIRQH 115
P+ C C K F + L NHIR H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 26.7 bits (58), Expect = 2.6
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 93 HKCTYCMKSFTRKEHLTNHIRQ 114
+ C C F+ L+ H+R
Sbjct: 117 YVCNVCNARFSTMSALSEHLRS 138
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 25.2 bits (55), Expect = 3.3
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 65 FPCQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKEH 107
F C C ++ +K + HV C C K F ++
Sbjct: 11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWGDDY 52
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational
changes, transferase, lactose metabolism; HET: MSE ANP
TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Length = 330
Score = 26.0 bits (58), Expect = 3.6
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 33 GESPHHCNYCAKSFTRKDHMVY 54
G S HH ++ + R HM+
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMIL 23
>2air_B Aspartate carbamoyltransferase regulatory chain; aspartate
transcarbamylase, alanosine, carbamyl phosphate, T
transferase; HET: AL0; 2.00A {Escherichia coli} SCOP:
d.58.2.1 g.41.7.1 PDB: 1ezz_B 1f1b_B* 1i5o_B* 1q95_G*
1r0b_G* 1r0c_B* 1raa_B* 1rab_B* 1rac_B* 1rad_B* 1rae_B*
1raf_B* 1rag_B* 1rah_B* 1rai_B* 1sku_B 1tth_B* 1tu0_B
1tug_B* 1xjw_B* ...
Length = 153
Score = 25.4 bits (56), Expect = 4.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 10 RCDYCAKTFTRKEHLVN 26
+C YC K F+ L N
Sbjct: 137 KCKYCEKEFSHNVVLAN 153
>1pg5_B Aspartate carbamoyltransferase regulatory chain; 2.60A {Sulfolobus
acidocaldarius} SCOP: d.58.2.1 g.41.7.1 PDB: 2be9_B*
Length = 168
Score = 25.5 bits (56), Expect = 5.4
Identities = 5/13 (38%), Positives = 6/13 (46%)
Query: 10 RCDYCAKTFTRKE 22
RC+YC E
Sbjct: 145 RCEYCETIIDENE 157
>2be7_D Aspartate carbamoyltransferase regulatory chain; atcase,
psychrophilic, cold adaptation, alloste holoenzyme;
2.85A {Moritella profunda}
Length = 153
Score = 25.0 bits (55), Expect = 5.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 10 RCDYCAKTFTRKE 22
+C YC KTF++
Sbjct: 136 KCKYCEKTFSKDI 148
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 35
Score = 23.2 bits (49), Expect = 7.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 88 TGESPHKCTYCMKSFTRKEHLTNHIRQ 114
+G S + C C+K F L +HIR+
Sbjct: 3 SGSSGYVCALCLKKFVSSIRLRSHIRE 29
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation
domain, Zn finger, DNA-binding regulatory protein; NMR
{Homo sapiens} SCOP: g.37.1.1
Length = 38
Score = 23.5 bits (50), Expect = 7.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 62 ETPFPCQY--CPKAFTRKDHLVNHVRRHT 88
+ PF C C + FT +DHL H +H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 23.2 bits (49), Expect = 7.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 6 ETPHRCDYCAKTFTRKEHLVNHVRQHTGE 34
H CD C K F K L +H HT +
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 24.2 bits (52), Expect = 8.1
Identities = 14/73 (19%), Positives = 20/73 (27%), Gaps = 5/73 (6%)
Query: 22 EHLVNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFPCQYCPKAFTRKD--- 78
H C +C + + HE + G C C + KD
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKDLKT 60
Query: 79 HLVNHVRRHTGES 91
H R +G S
Sbjct: 61 HPEVCGREGSGPS 73
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 24.7 bits (53), Expect = 8.2
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Query: 8 PHRCDYCAKTFTRKEHL-VNHVRQHTGESPHHCNYCAKSFTRKDHMVYHERQHTGETPFP 66
H+C + + N ++ C + + + H
Sbjct: 53 GHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMD 112
Query: 67 CQYCPKAFTRKDHLVNHVRRHTGESPHKCTYCMKSFTRKE 106
C C + F + H+ H+ + C C S ++
Sbjct: 113 CPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASMAFED 151
>1uax_A Ribonuclease HII, ribonuclease H2; RNA*DNA hybrid
ribonucleotidohydrolase, hydrolase; 2.00A {Pyrococcus
horikoshii} SCOP: c.55.3.1
Length = 220
Score = 24.9 bits (55), Expect = 8.5
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 21 KEHLVNHVRQHTGESPHH 38
KE L + +Q+ P
Sbjct: 177 KEWLEEYYKQYGDFPPIV 194
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active
transport, sugar uptake and regulation, transport
protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3
b.40.6.3 c.37.1.12 PDB: 1vci_A*
Length = 372
Score = 24.9 bits (55), Expect = 9.2
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 118 RRVNDLPPK 126
R V LPPK
Sbjct: 73 RDVTYLPPK 81
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.134 0.470
Gapped
Lambda K H
0.267 0.0505 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,936,661
Number of extensions: 96364
Number of successful extensions: 1542
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1147
Number of HSP's successfully gapped: 736
Length of query: 126
Length of database: 6,701,793
Length adjustment: 82
Effective length of query: 44
Effective length of database: 4,412,271
Effective search space: 194139924
Effective search space used: 194139924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.0 bits)