Your job contains 1 sequence.
>psy10770
MFLIEHSFSRSKHNYLTFTPQTLAHTLQGMGQDEGMYQQYIPLALHIAEDHFLSHESKDV
QLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLA
YVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELL
DIILMNIVDPQKTQRKNAYLLAKELIVKTNDTLEPYIQNLTRLANAVFPNLGDIAPLGAM
EIFMGAMKPLRDS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10770
(253 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260012 - symbol:pds5 species:7227 "Drosophila mel... 719 3.5e-70 1
UNIPROTKB|Q498H0 - symbol:pds5b-a "Sister chromatid cohes... 561 5.4e-53 1
UNIPROTKB|Q5F3U9 - symbol:PDS5B "Sister chromatid cohesio... 557 1.4e-52 1
UNIPROTKB|F1P3B8 - symbol:PDS5B "Sister chromatid cohesio... 557 1.4e-52 1
MGI|MGI:2140945 - symbol:Pds5b "PDS5, regulator of cohesi... 557 1.4e-52 1
UNIPROTKB|F1Q0Z0 - symbol:PDS5B "Uncharacterized protein"... 557 1.4e-52 1
UNIPROTKB|Q9NTI5 - symbol:PDS5B "Sister chromatid cohesio... 557 1.4e-52 1
RGD|1310838 - symbol:Pds5b "PDS5, regulator of cohesion m... 557 1.4e-52 1
UNIPROTKB|Q6TRW4 - symbol:Pds5b "Sister chromatid cohesio... 557 1.4e-52 1
UNIPROTKB|F1N7G8 - symbol:PDS5B "Uncharacterized protein"... 557 1.5e-52 1
UNIPROTKB|Q5U241 - symbol:pds5b-b "Sister chromatid cohes... 557 1.5e-52 1
UNIPROTKB|F1NIQ3 - symbol:PDS5A "Sister chromatid cohesio... 549 8.6e-52 1
UNIPROTKB|Q5F3V3 - symbol:PDS5A "Sister chromatid cohesio... 549 8.6e-52 1
ZFIN|ZDB-GENE-091217-2 - symbol:pds5b "PDS5, regulator of... 548 1.3e-51 1
UNIPROTKB|E1BKG4 - symbol:E1BKG4 "Uncharacterized protein... 542 4.6e-51 1
UNIPROTKB|Q4KLU7 - symbol:pds5a-b "Sister chromatid cohes... 541 6.1e-51 1
UNIPROTKB|I3LU95 - symbol:PDS5A "Uncharacterized protein"... 538 1.2e-50 1
RGD|1307094 - symbol:Pds5a "PDS5, regulator of cohesion m... 538 1.3e-50 1
UNIPROTKB|E2R7R4 - symbol:PDS5A "Uncharacterized protein"... 538 1.3e-50 1
UNIPROTKB|Q29RF7 - symbol:PDS5A "Sister chromatid cohesio... 538 1.3e-50 1
UNIPROTKB|Q4QXM3 - symbol:pds5a-a "Sister chromatid cohes... 536 2.1e-50 1
ZFIN|ZDB-GENE-040426-1612 - symbol:pds5a "PDS5, regulator... 530 9.2e-50 1
CGD|CAL0006191 - symbol:PDS5 species:5476 "Candida albica... 246 1.8e-19 1
UNIPROTKB|Q5A2J0 - symbol:PDS5 "Putative uncharacterized ... 246 1.8e-19 1
TAIR|locus:2025712 - symbol:AT1G80810 species:3702 "Arabi... 223 2.4e-17 1
ASPGD|ASPL0000065875 - symbol:bimD species:162425 "Emeric... 206 1.8e-16 2
TAIR|locus:2169058 - symbol:AT5G47690 species:3702 "Arabi... 218 2.3e-16 1
TAIR|locus:2116787 - symbol:AT4G31880 species:3702 "Arabi... 210 7.3e-16 1
POMBASE|SPAC110.02 - symbol:pds5 "cohesin-associated prot... 211 8.9e-16 1
TAIR|locus:2200557 - symbol:AT1G15940 species:3702 "Arabi... 190 1.2e-13 1
WB|WBGene00001352 - symbol:evl-14 species:6239 "Caenorhab... 147 2.2e-12 2
SGD|S000004681 - symbol:PDS5 "Protein involved in sister ... 157 2.2e-08 1
DICTYBASE|DDB_G0275929 - symbol:pds5 "sister chromatid co... 138 4.3e-06 1
>FB|FBgn0260012 [details] [associations]
symbol:pds5 species:7227 "Drosophila melanogaster"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR016024
EMBL:AE013599 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005700 GO:GO:0030717 GO:GO:0007062
KO:K11267 eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OMA:NMIARRI
EMBL:BT053744 RefSeq:NP_001246271.1 RefSeq:NP_610719.1
UniGene:Dm.4304 IntAct:A1Z8S6 STRING:A1Z8S6
EnsemblMetazoa:FBtr0087974 EnsemblMetazoa:FBtr0306062 GeneID:36286
KEGG:dme:Dmel_CG17509 UCSC:CG17509-RA CTD:36286 FlyBase:FBgn0260012
OrthoDB:EOG402V70 ChiTaRS:pds5 GenomeRNAi:36286 NextBio:797748
Uniprot:A1Z8S6
Length = 1218
Score = 719 (258.2 bits), Expect = 3.5e-70, P = 3.5e-70
Identities = 138/198 (69%), Positives = 165/198 (83%)
Query: 21 QTLAHTLQGMGQDEGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAP 80
+TLA+ LQ M QD+ +YQQYIPLALH+ +D F+ H S+DVQLLIACC+ADVLRVYAPEAP
Sbjct: 27 KTLANVLQTMDQDDNLYQQYIPLALHLLDDFFMQHPSRDVQLLIACCVADVLRVYAPEAP 86
Query: 81 YKDPDQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCA 140
YK+ DQ+KTIF F IKQL+GLKDP+DP+FKRYFYLLENLA+VKSFNMCFELED QEIF
Sbjct: 87 YKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFELEDCQEIFQD 146
Query: 141 LFSLMFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYL 200
LFS +FKIVND+HS KV +F LDVL PLITE+D LS ELLD+IL+NIV+P K+ K A
Sbjct: 147 LFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPYKSNNKFACQ 206
Query: 201 LAKELIVKTNDTLEPYIQ 218
L ++L+ KT D LE I+
Sbjct: 207 LTEQLLTKTGDALESTIK 224
>UNIPROTKB|Q498H0 [details] [associations]
symbol:pds5b-a "Sister chromatid cohesion protein PDS5
homolog B-A" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC100220 EMBL:AY695732 RefSeq:NP_001089658.1 UniGene:Xl.51523
ProteinModelPortal:Q498H0 IntAct:Q498H0 GeneID:734718
KEGG:xla:734718 CTD:734718 Xenbase:XB-GENE-6255297 Uniprot:Q498H0
Length = 1448
Score = 561 (202.5 bits), Expect = 5.4e-53, P = 5.4e-53
Identities = 103/195 (52%), Positives = 139/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E +QY+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFISRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ ++ E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|Q5F3U9 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0051301 "cell division"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AJ851551 IPI:IPI00592195 UniGene:Gga.33882 STRING:Q5F3U9
PRIDE:Q5F3U9 InParanoid:Q5F3U9 Uniprot:Q5F3U9
Length = 1412
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|F1P3B8 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] InterPro:IPR016024 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488
IPI:IPI00592195 UniGene:Gga.33882 CTD:23047 OMA:AKKGPPR
EMBL:AC147444 RefSeq:NP_001012845.2 Ensembl:ENSGALT00000027571
GeneID:418910 KEGG:gga:418910 NextBio:20822038 ArrayExpress:F1P3B8
Uniprot:F1P3B8
Length = 1446
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>MGI|MGI:2140945 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance,
homolog B (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 MGI:MGI:2140945 GO:GO:0005634
GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267 eggNOG:NOG268017
OrthoDB:EOG46T30N GeneTree:ENSGT00390000012488 CTD:23047
EMBL:AY102267 EMBL:AK041682 EMBL:AK045159 EMBL:AK048706
EMBL:AK164853 EMBL:BC096539 EMBL:AK122414 IPI:IPI00317401
IPI:IPI00776026 IPI:IPI00845638 RefSeq:NP_780519.3 UniGene:Mm.32959
ProteinModelPortal:Q4VA53 SMR:Q4VA53 STRING:Q4VA53
PhosphoSite:Q4VA53 PaxDb:Q4VA53 PRIDE:Q4VA53
Ensembl:ENSMUST00000016569 Ensembl:ENSMUST00000110486 GeneID:100710
KEGG:mmu:100710 UCSC:uc009auh.1 UCSC:uc009aui.1 UCSC:uc009auj.1
InParanoid:Q4VA53 NextBio:354602 Bgee:Q4VA53 Genevestigator:Q4VA53
Uniprot:Q4VA53
Length = 1446
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|F1Q0Z0 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0000785
GO:GO:0007064 KO:K11267 GeneTree:ENSGT00390000012488 CTD:23047
OMA:AKKGPPR EMBL:AAEX03014215 RefSeq:XP_543139.3
Ensembl:ENSCAFT00000010289 GeneID:486014 KEGG:cfa:486014
Uniprot:F1Q0Z0
Length = 1447
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|Q9NTI5 [details] [associations]
symbol:PDS5B "Sister chromatid cohesion protein PDS5
homolog B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005524
"ATP binding" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0042127 "regulation of cell proliferation"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_115566 GO:GO:0008285 SUPFAM:SSF48371
Reactome:REACT_21300 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0008283
GO:GO:0000785 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
eggNOG:NOG268017 OrthoDB:EOG46T30N EMBL:U95825 EMBL:AB023196
EMBL:AK026889 EMBL:AL137201 EMBL:AL138820 EMBL:Z75889 EMBL:BC039256
EMBL:BC070274 IPI:IPI00240812 IPI:IPI00845253 IPI:IPI00845353
IPI:IPI00845446 IPI:IPI00845459 RefSeq:NP_055847.1
UniGene:Hs.646051 ProteinModelPortal:Q9NTI5 SMR:Q9NTI5
IntAct:Q9NTI5 STRING:Q9NTI5 PhosphoSite:Q9NTI5 DMDM:74725312
PaxDb:Q9NTI5 PRIDE:Q9NTI5 DNASU:23047 Ensembl:ENST00000315596
Ensembl:ENST00000450460 GeneID:23047 KEGG:hsa:23047 UCSC:uc001uun.3
UCSC:uc001uuo.3 UCSC:uc010abf.3 CTD:23047 GeneCards:GC13P033160
HGNC:HGNC:20418 HPA:HPA039513 HPA:HPA040015 MIM:605333
neXtProt:NX_Q9NTI5 PharmGKB:PA162399098 OMA:AKKGPPR ChiTaRS:PDS5B
GenomeRNAi:23047 NextBio:44084 ArrayExpress:Q9NTI5 Bgee:Q9NTI5
CleanEx:HS_PDS5B Genevestigator:Q9NTI5 Uniprot:Q9NTI5
Length = 1447
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>RGD|1310838 [details] [associations]
symbol:Pds5b "PDS5, regulator of cohesion maintenance, homolog B
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=ISO;ISS] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO;IDA] [GO:0042127 "regulation of
cell proliferation" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 InterPro:IPR017956 SMART:SM00384 RGD:1310838
GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677
GO:GO:0007064 HOVERGEN:HBG108241 eggNOG:NOG268017
HOGENOM:HOG000230672 EMBL:AABR03082233 EMBL:AABR03082545
EMBL:AY388627 EMBL:AY820182 EMBL:AY820183 EMBL:AY831451
EMBL:AY831452 EMBL:AY836673 IPI:IPI00515846 IPI:IPI00562353
IPI:IPI00764370 UniGene:Rn.105768 ProteinModelPortal:Q6TRW4
STRING:Q6TRW4 PhosphoSite:Q6TRW4 PRIDE:Q6TRW4 UCSC:RGD:1310838
ArrayExpress:Q6TRW4 Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|Q6TRW4 [details] [associations]
symbol:Pds5b "Sister chromatid cohesion protein PDS5
homolog B" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 RGD:1310838 GO:GO:0005634 GO:GO:0008285
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0003677 GO:GO:0007064
HOVERGEN:HBG108241 eggNOG:NOG268017 HOGENOM:HOG000230672
EMBL:AABR03082233 EMBL:AABR03082545 EMBL:AY388627 EMBL:AY820182
EMBL:AY820183 EMBL:AY831451 EMBL:AY831452 EMBL:AY836673
IPI:IPI00515846 IPI:IPI00562353 IPI:IPI00764370 UniGene:Rn.105768
ProteinModelPortal:Q6TRW4 STRING:Q6TRW4 PhosphoSite:Q6TRW4
PRIDE:Q6TRW4 UCSC:RGD:1310838 ArrayExpress:Q6TRW4
Genevestigator:Q6TRW4 Uniprot:Q6TRW4
Length = 1447
Score = 557 (201.1 bits), Expect = 1.4e-52, P = 1.4e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|F1N7G8 [details] [associations]
symbol:PDS5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
InterPro:IPR016024 GO:GO:0008285 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000785 GO:GO:0007064
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:DAAA02033076
IPI:IPI00826394 Ensembl:ENSBTAT00000015410 Uniprot:F1N7G8
Length = 1449
Score = 557 (201.1 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 103/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ +I E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|Q5U241 [details] [associations]
symbol:pds5b-b "Sister chromatid cohesion protein PDS5
homolog B-B" species:8355 "Xenopus laevis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] InterPro:IPR016024 InterPro:IPR017956
SMART:SM00384 GO:GO:0005634 GO:GO:0008285 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0003677 GO:GO:0007064 HOVERGEN:HBG108241 KO:K11267
EMBL:BC086289 RefSeq:NP_001088643.2 UniGene:Xl.49057
ProteinModelPortal:Q5U241 IntAct:Q5U241 PRIDE:Q5U241 GeneID:495695
KEGG:xla:495695 CTD:495695 Xenbase:XB-GENE-6041384 Uniprot:Q5U241
Length = 1464
Score = 557 (201.1 bits), Expect = 1.5e-52, P = 1.5e-52
Identities = 102/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E +QY+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKEQYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K P F RYFYLLEN+A+VKS+N+CFELED EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDCNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV M+D++ ++ E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|F1NIQ3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008156 "negative regulation of
DNA replication" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 IPI:IPI00599274 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AADN02031215 EMBL:AADN02031216
EMBL:AADN02031217 Ensembl:ENSGALT00000023102 Uniprot:F1NIQ3
Length = 1330
Score = 549 (198.3 bits), Expect = 8.6e-52, P = 8.6e-52
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 45 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 104
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 105 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 164
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K A+ LAK
Sbjct: 165 LFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKV 224
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+EP I N
Sbjct: 225 LLKRTVQTIEPCIAN 239
>UNIPROTKB|Q5F3V3 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9031 "Gallus gallus" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
HOVERGEN:HBG108241 CTD:23244 KO:K11267 EMBL:AJ851547
IPI:IPI00599274 RefSeq:NP_001012598.1 UniGene:Gga.17541
ProteinModelPortal:Q5F3V3 STRING:Q5F3V3 GeneID:422787
KEGG:gga:422787 eggNOG:NOG268017 HOGENOM:HOG000230672
InParanoid:Q5F3V3 OrthoDB:EOG46T30N NextBio:20825370 Uniprot:Q5F3V3
Length = 1330
Score = 549 (198.3 bits), Expect = 8.6e-52, P = 8.6e-52
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 45 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 104
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 105 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 164
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K A+ LAK
Sbjct: 165 LFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKV 224
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+EP I N
Sbjct: 225 LLKRTVQTIEPCIAN 239
>ZFIN|ZDB-GENE-091217-2 [details] [associations]
symbol:pds5b "PDS5, regulator of cohesion
maintenance, homolog B (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR016024
InterPro:IPR017956 SMART:SM00384 ZFIN:ZDB-GENE-091217-2
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
GeneTree:ENSGT00390000012488 OMA:AKKGPPR EMBL:CR855379
EMBL:CT027778 EMBL:CU369047 IPI:IPI00501181
Ensembl:ENSDART00000087246 Uniprot:E7EXW9
Length = 1415
Score = 548 (198.0 bits), Expect = 1.3e-51, P = 1.3e-51
Identities = 101/195 (51%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E + Y+ LALH+A D FL H KDV+LL+ACC+AD+ R+YAPEAPY P
Sbjct: 41 TFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSP 100
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IF+F+ +QL GL+D K F RYFYLLEN+A+VKS+N+CFELEDS EIF L+
Sbjct: 101 DKLKDIFMFITRQLKGLEDTKSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRT 160
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F+++N+ H+ KV M+D++ ++ E D +S ELLD +L+N+V K K AY LAK
Sbjct: 161 LFQVINNGHNQKVHMHMVDLMSSIVCEGDSVSQELLDTVLVNLVPAHKNLNKQAYDLAKA 220
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T +EPYI N
Sbjct: 221 LLKRTAQAIEPYITN 235
>UNIPROTKB|E1BKG4 [details] [associations]
symbol:E1BKG4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:DAAA02017473 EMBL:DAAA02017474 EMBL:DAAA02017475
EMBL:DAAA02017476 EMBL:DAAA02017477 EMBL:DAAA02017478
EMBL:DAAA02017479 EMBL:DAAA02017480 IPI:IPI00715373
Ensembl:ENSBTAT00000023680 Uniprot:E1BKG4
Length = 1295
Score = 542 (195.9 bits), Expect = 4.6e-51, P = 4.6e-51
Identities = 103/200 (51%), Positives = 141/200 (70%)
Query: 21 QTLAHTLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEA 79
Q + T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEA
Sbjct: 2 QMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEA 61
Query: 80 PYKDPDQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFC 139
PY D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF
Sbjct: 62 PYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFI 121
Query: 140 ALFSLMFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAY 199
LF +F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K ++
Sbjct: 122 QLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSF 181
Query: 200 LLAKELIVKTNDTLEPYIQN 219
LAK L+ +T T+E I N
Sbjct: 182 DLAKVLLKRTVQTIEACIAN 201
>UNIPROTKB|Q4KLU7 [details] [associations]
symbol:pds5a-b "Sister chromatid cohesion protein PDS5
homolog A-B" species:8355 "Xenopus laevis" [GO:0008156 "negative
regulation of DNA replication" evidence=ISS] InterPro:IPR016024
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
UniGene:Xl.76790 Xenbase:XB-GENE-5812802 HOVERGEN:HBG108241
EMBL:BC098992 RefSeq:NP_001090063.1 ProteinModelPortal:Q4KLU7
PRIDE:Q4KLU7 GeneID:735137 KEGG:xla:735137 CTD:23244 KO:K11267
Uniprot:Q4KLU7
Length = 1323
Score = 541 (195.5 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 102/195 (52%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH++ D FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 43 TFMDMDQDSEEEKQQYLPLALHLSSDFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 102
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 103 DKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKT 162
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ + E D ++ E LD IL+N++ K K A+ LAK
Sbjct: 163 LFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAHKNLNKQAFDLAKV 222
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+EP I N
Sbjct: 223 LLKRTAQTIEPCIAN 237
>UNIPROTKB|I3LU95 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008156 "negative regulation of DNA replication"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000785
GO:GO:0008156 OMA:TKDAQSP GeneTree:ENSGT00390000012488
EMBL:FP326671 Ensembl:ENSSSCT00000029818 Uniprot:I3LU95
Length = 1291
Score = 538 (194.4 bits), Expect = 1.2e-50, P = 1.2e-50
Identities = 102/195 (52%), Positives = 139/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 5 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 64
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 65 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 124
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K ++ LAK
Sbjct: 125 LFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKV 184
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+E I N
Sbjct: 185 LLKRTVQTIEACIAN 199
>RGD|1307094 [details] [associations]
symbol:Pds5a "PDS5, regulator of cohesion maintenance, homolog A
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000785
"chromatin" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0008156 "negative
regulation of DNA replication" evidence=ISO;ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR016024 RGD:1307094 GO:GO:0005886 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0000785
GO:GO:0008156 HOVERGEN:HBG108241 CTD:23244 KO:K11267
eggNOG:NOG268017 HOGENOM:HOG000230672 OrthoDB:EOG46T30N
EMBL:EF460313 IPI:IPI00364488 RefSeq:NP_001077093.1
UniGene:Rn.24482 ProteinModelPortal:A4L9P7 STRING:A4L9P7
PhosphoSite:A4L9P7 PRIDE:A4L9P7 Ensembl:ENSRNOT00000003437
GeneID:305343 KEGG:rno:305343 UCSC:RGD:1307094
GeneTree:ENSGT00390000012488 InParanoid:A4L9P7 NextBio:654401
Genevestigator:A4L9P7 Uniprot:A4L9P7
Length = 1333
Score = 538 (194.4 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 102/195 (52%), Positives = 139/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 50 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 109
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 110 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 169
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K ++ LAK
Sbjct: 170 LFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKV 229
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+E I N
Sbjct: 230 LLKRTVQTIEACIAN 244
>UNIPROTKB|E2R7R4 [details] [associations]
symbol:PDS5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008156 "negative regulation of DNA
replication" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR016024 GO:GO:0005886
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0000785 GO:GO:0008156 CTD:23244 KO:K11267 OMA:TKDAQSP
GeneTree:ENSGT00390000012488 EMBL:AAEX03002532 RefSeq:XP_851177.1
Ensembl:ENSCAFT00000025282 GeneID:479103 KEGG:cfa:479103
NextBio:20854336 Uniprot:E2R7R4
Length = 1337
Score = 538 (194.4 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 102/195 (52%), Positives = 139/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 51 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 110
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 111 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 170
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K ++ LAK
Sbjct: 171 LFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKV 230
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+E I N
Sbjct: 231 LLKRTVQTIEACIAN 245
>UNIPROTKB|Q29RF7 [details] [associations]
symbol:PDS5A "Sister chromatid cohesion protein PDS5
homolog A" species:9606 "Homo sapiens" [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008156 "negative regulation of
DNA replication" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016024 GO:GO:0005886 GO:GO:0005634
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301
GO:GO:0007067 GO:GO:0000785 GO:GO:0008156 HOVERGEN:HBG108241
CTD:23244 KO:K11267 eggNOG:NOG268017 HOGENOM:HOG000230672
OrthoDB:EOG46T30N EMBL:AY550968 EMBL:AK098331 EMBL:BC041361
EMBL:BC114218 EMBL:BC126225 EMBL:AF294791 EMBL:CR749425
EMBL:AB014548 IPI:IPI00854642 IPI:IPI00854687 RefSeq:NP_001093869.1
RefSeq:NP_001093870.1 UniGene:Hs.331431 ProteinModelPortal:Q29RF7
IntAct:Q29RF7 STRING:Q29RF7 PhosphoSite:Q29RF7 DMDM:121947590
PaxDb:Q29RF7 PRIDE:Q29RF7 DNASU:23244 Ensembl:ENST00000303538
Ensembl:ENST00000503396 GeneID:23244 KEGG:hsa:23244 UCSC:uc003guv.4
UCSC:uc003guw.4 GeneCards:GC04M039824 HGNC:HGNC:29088 HPA:HPA036662
MIM:613200 neXtProt:NX_Q29RF7 PharmGKB:PA162399027
InParanoid:Q29RF7 OMA:TKDAQSP ChiTaRS:PDS5A GenomeRNAi:23244
NextBio:44916 ArrayExpress:Q29RF7 Bgee:Q29RF7 CleanEx:HS_PDS5A
Genevestigator:Q29RF7 Uniprot:Q29RF7
Length = 1337
Score = 538 (194.4 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 102/195 (52%), Positives = 139/195 (71%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 51 TFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 110
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 111 DKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRT 170
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K ++ LAK
Sbjct: 171 LFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKV 230
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+E I N
Sbjct: 231 LLKRTVQTIEACIAN 245
>UNIPROTKB|Q4QXM3 [details] [associations]
symbol:pds5a-a "Sister chromatid cohesion protein PDS5
homolog A-A" species:8355 "Xenopus laevis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008156 "negative regulation of DNA
replication" evidence=ISS] InterPro:IPR016024 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0051301 GO:GO:0007067 GO:GO:0008156
EMBL:AY695731 UniGene:Xl.76790 ProteinModelPortal:Q4QXM3
IntAct:Q4QXM3 PRIDE:Q4QXM3 Xenbase:XB-GENE-5812802
HOVERGEN:HBG108241 Uniprot:Q4QXM3
Length = 1323
Score = 536 (193.7 bits), Expect = 2.1e-50, P = 2.1e-50
Identities = 101/195 (51%), Positives = 138/195 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+PLALH++ + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 43 TYMDMDQDSEEEKQQYLPLALHLSSEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 102
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 103 DKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKT 162
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ + E D ++ E LD IL+N++ K K A+ LAK
Sbjct: 163 LFSVINNSHNQKVQMHMLDLMSSITMEGDGVTQEQLDSILINLISAHKNLNKQAFDLAKV 222
Query: 205 LIVKTNDTLEPYIQN 219
L+ +T T+EP I N
Sbjct: 223 LLKRTAQTIEPCIAN 237
>ZFIN|ZDB-GENE-040426-1612 [details] [associations]
symbol:pds5a "PDS5, regulator of cohesion
maintenance, homolog A (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR016024
ZFIN:ZDB-GENE-040426-1612 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GeneTree:ENSGT00390000012488 EMBL:CR759875
IPI:IPI00829298 Ensembl:ENSDART00000126785 ArrayExpress:F1QDE7
Bgee:F1QDE7 Uniprot:F1QDE7
Length = 1321
Score = 530 (191.6 bits), Expect = 9.2e-50, P = 9.2e-50
Identities = 101/193 (52%), Positives = 137/193 (70%)
Query: 26 TLQGMGQD-EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDP 84
T M QD E QQY+ LALH+A + FL + +KDV+LL+ACC+AD+ R+YAPEAPY
Sbjct: 47 TYMDMDQDSEEEKQQYLALALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSH 106
Query: 85 DQVKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSL 144
D++K IFLF+ +QL GL+D K P F RYFYLLENLA+VKS+N+CFELED EIF LF
Sbjct: 107 DKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKT 166
Query: 145 MFKIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKE 204
+F ++N+ H+ KV+ MLD++ +I E D ++ ELLD IL+N++ K K AY LA+
Sbjct: 167 LFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLART 226
Query: 205 LIVKTNDTLEPYI 217
L+ +T T+E I
Sbjct: 227 LLKRTVQTIETCI 239
>CGD|CAL0006191 [details] [associations]
symbol:PDS5 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0030892 "mitotic cohesin complex"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0051455
"attachment of spindle microtubules to kinetochore involved in
homologous chromosome segregation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:2000817 "regulation
of histone H3-T3 phosphorylation involved in chromosome passenger
complex localization to kinetochore" evidence=IEA] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IEA]
InterPro:IPR016024 CGD:CAL0006191 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267
eggNOG:NOG268017 RefSeq:XP_715997.1 RefSeq:XP_716056.1
STRING:Q5A2J0 GeneID:3642341 GeneID:3642402 KEGG:cal:CaO19.2216
KEGG:cal:CaO19.9761 Uniprot:Q5A2J0
Length = 1303
Score = 246 (91.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 55/185 (29%), Positives = 101/185 (54%)
Query: 53 LSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGLKDPKD-PAFKR 111
LSH S VQ + CC++D+LR+YAP APY D Q+ +F KQ + L KD P +++
Sbjct: 70 LSHTSMGVQAYLCCCLSDILRIYAPNAPYSD-QQLSDVFKLFFKQFSRLSAKKDDPFYQQ 128
Query: 112 YFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLCPLITE 171
+ YLL+ LA KS + +L DS+ + ++F+ + + ++++ + D+L +++E
Sbjct: 129 HVYLLKRLAEAKSTIIITDLPDSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSE 188
Query: 172 SDILSHELLDIILMNIV--DPQKTQRKNAYLLAKELIVKTNDTLEPYIQNLTRLANAVFP 229
++++ H++L +IL DP K N+ + + E N +L N+ R++ V
Sbjct: 189 AEVVPHQILQLILQKFANHDPSKLL-SNSGITSPEF----NFSLAICENNIDRMSRLVAQ 243
Query: 230 NLGDI 234
+I
Sbjct: 244 YFSEI 248
>UNIPROTKB|Q5A2J0 [details] [associations]
symbol:PDS5 "Putative uncharacterized protein PDS5"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR016024 CGD:CAL0006191
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K11267 eggNOG:NOG268017
RefSeq:XP_715997.1 RefSeq:XP_716056.1 STRING:Q5A2J0 GeneID:3642341
GeneID:3642402 KEGG:cal:CaO19.2216 KEGG:cal:CaO19.9761
Uniprot:Q5A2J0
Length = 1303
Score = 246 (91.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 55/185 (29%), Positives = 101/185 (54%)
Query: 53 LSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGLKDPKD-PAFKR 111
LSH S VQ + CC++D+LR+YAP APY D Q+ +F KQ + L KD P +++
Sbjct: 70 LSHTSMGVQAYLCCCLSDILRIYAPNAPYSD-QQLSDVFKLFFKQFSRLSAKKDDPFYQQ 128
Query: 112 YFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLCPLITE 171
+ YLL+ LA KS + +L DS+ + ++F+ + + ++++ + D+L +++E
Sbjct: 129 HVYLLKRLAEAKSTIIITDLPDSESLIVSIFTTFYNLAAKGFPVELETIITDILSEVLSE 188
Query: 172 SDILSHELLDIILMNIV--DPQKTQRKNAYLLAKELIVKTNDTLEPYIQNLTRLANAVFP 229
++++ H++L +IL DP K N+ + + E N +L N+ R++ V
Sbjct: 189 AEVVPHQILQLILQKFANHDPSKLL-SNSGITSPEF----NFSLAICENNIDRMSRLVAQ 243
Query: 230 NLGDI 234
+I
Sbjct: 244 YFSEI 248
>TAIR|locus:2025712 [details] [associations]
symbol:AT1G80810 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
SUPFAM:SSF48371 EMBL:AC011713 IPI:IPI00846911 RefSeq:NP_001077860.1
UniGene:At.33874 ProteinModelPortal:A8MRD9 PaxDb:A8MRD9
PRIDE:A8MRD9 EnsemblPlants:AT1G80810.2 GeneID:844420
KEGG:ath:AT1G80810 TAIR:At1g80810 eggNOG:NOG241686
HOGENOM:HOG000015164 InParanoid:A8MRD9 OMA:PLDEYAP PhylomeDB:A8MRD9
ProtClustDB:CLSN2679925 ArrayExpress:A8MRD9 Genevestigator:A8MRD9
Uniprot:A8MRD9
Length = 774
Score = 223 (83.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 52/182 (28%), Positives = 95/182 (52%)
Query: 36 MYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLI 95
M IP + LSH DV++ + C+ +++R+ APE PY D D +K IF I
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSD-DLMKEIFRLTI 59
Query: 96 KQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSG 155
+ L D ++K+ ++L+N+A VKS + +LE ++ +F FK + +H
Sbjct: 60 EAFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLE-CYDLILQMFRNFFKFIRSDHPQ 118
Query: 156 KVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKTNDTLEP 215
V S M ++ +I E++ +S +LLD +L + + ++ LA++++ + L+P
Sbjct: 119 LVFSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKP 178
Query: 216 YI 217
YI
Sbjct: 179 YI 180
>ASPGD|ASPL0000065875 [details] [associations]
symbol:bimD species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0043935 "sexual sporulation resulting in
formation of a cellular spore" evidence=IMP] [GO:0071459 "protein
localization to chromosome, centromeric region" evidence=IEA]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IEA]
[GO:2000817 "regulation of histone H3-T3 phosphorylation involved
in chromosome passenger complex localization to kinetochore"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001304 EMBL:AACD01000127 KO:K11267
OrthoDB:EOG44XNR4 RefSeq:XP_680565.1 ProteinModelPortal:Q5AWN4
EnsemblFungi:CADANIAT00000142 GeneID:2870172 KEGG:ani:AN7296.2
HOGENOM:HOG000168219 OMA:FAITHET Uniprot:Q5AWN4
Length = 1506
Score = 206 (77.6 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 58/182 (31%), Positives = 96/182 (52%)
Query: 21 QTLAHTLQGMGQDEGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAP 80
QTLA L+ + Q+E + ++ +A L+H+ K V+ CCI DVLR+ AP+AP
Sbjct: 53 QTLAQELRKLEQEEIEKESLRKVSQELATAQLLAHKDKGVRAWATCCIVDVLRLCAPDAP 112
Query: 81 YKDPDQVKTIFLFLIKQL-NGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFC 139
+ +Q+K IF ++ + L DP +P ++ Y+L +LA VKS + +L+ +
Sbjct: 113 FT-ANQLKDIFTCIVSSIIPALGDPSNPYNAQHIYVLNSLAEVKSIVLMTDLDHPDTLIV 171
Query: 140 ALFSLMFKIV-------NDEHSGK-VKSFMLDVLCPLITESDILSHELLDIILMNI--VD 189
LF F IV E K V+ M +L +I ES +L+ +++D+I+ VD
Sbjct: 172 PLFISCFDIVAGSAKASTGEPVAKNVEYDMTRLLVTVIDESPVLAPDVVDVIVAQFLRVD 231
Query: 190 PQ 191
P+
Sbjct: 232 PR 233
Score = 41 (19.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 198 AYLLAKELIVKTNDTLEPYIQNLTRLANAVFPNLGDIAPLGAMEI 242
A+ + KE+ + LE +Q + + A P ++ G EI
Sbjct: 799 AHEMLKEISSLNPEVLEAQVQEICKDLEAQAPKATTVSAAGTEEI 843
>TAIR|locus:2169058 [details] [associations]
symbol:AT5G47690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA;IDA] [GO:0007067 "mitosis" evidence=RCA]
InterPro:IPR016024 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB016886 KO:K11267 eggNOG:NOG268017
OMA:NMIARRI IPI:IPI00892180 RefSeq:NP_001119390.1 UniGene:At.44744
ProteinModelPortal:B3H5K3 SMR:B3H5K3 PaxDb:B3H5K3 PRIDE:B3H5K3
EnsemblPlants:AT5G47690.3 GeneID:834820 KEGG:ath:AT5G47690
TAIR:At5g47690 HOGENOM:HOG000064635 PhylomeDB:B3H5K3
ProtClustDB:CLSN2702261 Genevestigator:B3H5K3 Uniprot:B3H5K3
Length = 1607
Score = 218 (81.8 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 50/173 (28%), Positives = 97/173 (56%)
Query: 47 IAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGLKDPKD 106
+ + L+H+ KDV+LL+A C++++ R+ APEAPY D + +K IF ++ GL D
Sbjct: 59 VIKPEILNHQDKDVKLLVASCVSEITRITAPEAPYSD-NIMKDIFQLIVSAFAGLNDVSG 117
Query: 107 PAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLC 166
P+F R +LE +A +S + +LE ++ +F+ + D+H V S M +++
Sbjct: 118 PSFGRRVLILETVAKYRSCVVMLDLE-CDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMI 176
Query: 167 PLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKTNDTLEPYIQN 219
L+ ES+ + LL +IL++ + ++ ++A A+ L +K + P +++
Sbjct: 177 VLLEESEDVQEHLL-LILLSKLGRNRSDVRDA---ARRLAMKVIEHCAPKVES 225
>TAIR|locus:2116787 [details] [associations]
symbol:AT4G31880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] GO:GO:0005829 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:NOG12793 UniGene:At.31705
EMBL:BT002315 IPI:IPI00525095 RefSeq:NP_194916.2 PaxDb:Q8GUP3
PRIDE:Q8GUP3 EnsemblPlants:AT4G31880.1 GeneID:829318
KEGG:ath:AT4G31880 TAIR:At4g31880 HOGENOM:HOG000148306
InParanoid:Q8GUP3 OMA:IATEEVS PhylomeDB:Q8GUP3
ProtClustDB:CLSN2716612 Genevestigator:Q8GUP3 Uniprot:Q8GUP3
Length = 873
Score = 210 (79.0 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 48/184 (26%), Positives = 92/184 (50%)
Query: 34 EGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLF 93
+ M PL + H DV++ +A CI+++ R+ AP+APY D DQ+K +F
Sbjct: 49 DSMQNALTPLMKGLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPYDD-DQMKEVFKL 107
Query: 94 LIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEH 153
++ L D ++ + +LE +A V+S + +LE + +F K + D H
Sbjct: 108 IVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLE-CDALLIEMFQHFLKAIRDHH 166
Query: 154 SGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKTNDTL 213
SG V S M +++ ++ ES+ + E+L IL ++ + + + L A++++ L
Sbjct: 167 SGNVFSSMENIMTLVLEESEDIPSEMLSPILHSVKKDDEISQVSRRL-AEQVLSNCASKL 225
Query: 214 EPYI 217
+ Y+
Sbjct: 226 KTYL 229
>POMBASE|SPAC110.02 [details] [associations]
symbol:pds5 "cohesin-associated protein Pds5"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IGI] [GO:0030892 "mitotic cohesin complex" evidence=IGI]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IMP]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IMP] [GO:0072356 "chromosome passenger complex
localization to kinetochore" evidence=IMP] [GO:2000281 "regulation
of histone H3-T3 phosphorylation" evidence=IDA] [GO:2000817
"regulation of histone H3-T3 phosphorylation involved in chromosome
passenger complex localization to kinetochore" evidence=IMP]
InterPro:IPR016024 PomBase:SPAC110.02 EMBL:CU329670 SUPFAM:SSF48371
GO:GO:0000775 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0006974 GO:GO:0000070 GO:GO:0000794
GO:GO:0071459 GO:GO:0051455 GO:GO:0007062 GO:GO:0030892 KO:K11267
eggNOG:NOG268017 EMBL:AB067651 EMBL:AF049529 PIR:T43647
RefSeq:NP_593535.1 ProteinModelPortal:Q9HFF5 IntAct:Q9HFF5
STRING:Q9HFF5 EnsemblFungi:SPAC110.02.1 GeneID:2541628
KEGG:spo:SPAC110.02 OMA:CESATMR OrthoDB:EOG44XNR4 NextBio:20802721
GO:GO:2000817 Uniprot:Q9HFF5
Length = 1205
Score = 211 (79.3 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 51/201 (25%), Positives = 103/201 (51%)
Query: 27 LQGMGQDEGMYQQYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQ 86
L + QD +P+A + ++ L H+ K ++ CCI ++LR+ AP+AP+ Q
Sbjct: 34 LTSLSQDTIDRDSVLPVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLCAPDAPFT-LSQ 92
Query: 87 VKTIFLFLIKQLNGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMF 146
++ IF ++K L+GL + + + + + +LE+L+ VKS + +L +++E +F L F
Sbjct: 93 LEDIFQVILKILSGLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAEEFLVNIFRLFF 152
Query: 147 KIVNDEHSGKVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQ----------KTQRK 196
+ + V+ +MLD++ LI E + + L+I+ ++ + T
Sbjct: 153 DLARKGTTKNVEFYMLDIINQLINEINTIPAAALNILFAQLISGKGVRQTIGSSDSTNHG 212
Query: 197 NAYLLAKELIVKTNDTLEPYI 217
A+ LA+ + + D L+ Y+
Sbjct: 213 PAFQLARNIFHDSADRLQRYV 233
>TAIR|locus:2200557 [details] [associations]
symbol:AT1G15940 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR016024 EMBL:CP002684 GO:GO:0005829
GO:GO:0009506 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010924 HOGENOM:HOG000015164 ProtClustDB:CLSN2679925
IPI:IPI00543267 PIR:H86293 RefSeq:NP_173046.2 UniGene:At.28119
ProteinModelPortal:Q9S9P0 PRIDE:Q9S9P0 EnsemblPlants:AT1G15940.1
GeneID:838164 KEGG:ath:AT1G15940 TAIR:At1g15940 InParanoid:Q9S9P0
OMA:METIMIT PhylomeDB:Q9S9P0 Genevestigator:Q9S9P0 Uniprot:Q9S9P0
Length = 990
Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 46/176 (26%), Positives = 90/176 (51%)
Query: 42 PLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGL 101
P+ ++ D L + DV++ + C+ +++R+ APEAPY D +Q+K IF I+ L
Sbjct: 62 PMRALVSAD-LLRNPDSDVRVSVVSCLTEIMRITAPEAPYND-EQMKDIFQVTIEAFEKL 119
Query: 102 KDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFM 161
D ++++ +LE +A V+S + +LE ++ +F KI+ +H V M
Sbjct: 120 ADASSRSYRKAEVILETVAKVRSSLVMLDLE-CDDLVLEMFQRFLKIIRPDHPQLVLVSM 178
Query: 162 LDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKTNDTLEPYI 217
++ +I ES+ + +LL+I+L + + A L ++++ L+P I
Sbjct: 179 ETIMITVIDESEEVPMDLLEILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCI 234
>WB|WBGene00001352 [details] [associations]
symbol:evl-14 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0051177 "meiotic
sister chromatid cohesion" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IMP] InterPro:IPR016024
GO:GO:0009792 GO:GO:0006898 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0040011 GO:GO:0040018 GO:GO:0040035
GO:GO:0007064 EMBL:AL024499 GO:GO:0051177 EMBL:Z50874 KO:K11267
GeneTree:ENSGT00390000012488 PIR:T23142 RefSeq:NP_497865.2
ProteinModelPortal:G5EC05 EnsemblMetazoa:H38K22.1 GeneID:175555
KEGG:cel:CELE_H38K22.1 CTD:175555 WormBase:H38K22.1 OMA:ELIPPKR
NextBio:888652 Uniprot:G5EC05
Length = 1570
Score = 147 (56.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 29/100 (29%), Positives = 59/100 (59%)
Query: 39 QYIPLALHIAEDHFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQL 98
++ L H++++ FL + + D ++L++ C+A++LR++ PE P +K ++++L + +
Sbjct: 50 RFARLFQHLSQECFLDNSNTDFRILLSLCLANILRIFQPELPTPSVMDLKEVYIYLFRTM 109
Query: 99 NGLKD-PKD-PAFKRYFYLLENLAYVKSFNMCFELEDSQE 136
GL D +D P FK YF L+E + K E++D +
Sbjct: 110 RGLGDVTQDSPKFKNYFSLVETME--KIIPPIIEMKDHDD 147
Score = 94 (38.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 19/73 (26%), Positives = 41/73 (56%)
Query: 151 DEHSG-KVKSFMLDVLCPLITESDILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKT 209
DE++ K++ ++ + +IT D + +E LD++ +I++PQ++ A LA+++I
Sbjct: 197 DENAAEKIRKSLIQIATTVITNLDFVQNECLDVLFYHIINPQRSNFAEARALAEDIIRSC 256
Query: 210 NDTLEPYIQNLTR 222
+D + N R
Sbjct: 257 SDNESDTLANSIR 269
>SGD|S000004681 [details] [associations]
symbol:PDS5 "Protein involved in sister chromatid
condensation and cohesion" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0007129 "synapsis" evidence=IMP]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007126
"meiosis" evidence=IMP] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=ISS] [GO:0000798 "nuclear cohesin complex" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR016024 SGD:S000004681 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0051301 GO:GO:0005198
EMBL:Z48952 EMBL:BK006946 GO:GO:0006302 GO:GO:0000794 EMBL:Z49259
GO:GO:0007076 GO:GO:0007064 GO:GO:0007129 KO:K11267
eggNOG:NOG268017 GeneTree:ENSGT00390000012488 OrthoDB:EOG44XNR4
PIR:S54451 RefSeq:NP_013793.1 ProteinModelPortal:Q04264 SMR:Q04264
DIP:DIP-6799N IntAct:Q04264 MINT:MINT-650430 STRING:Q04264
PaxDb:Q04264 PeptideAtlas:Q04264 EnsemblFungi:YMR076C GeneID:855099
KEGG:sce:YMR076C CYGD:YMR076c HOGENOM:HOG000248675 OMA:KIWINFT
NextBio:978417 Genevestigator:Q04264 GermOnline:YMR076C
Uniprot:Q04264
Length = 1277
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 53 LSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIFLFLIKQLNGLKDPKDPAFKRY 112
L H+ ++ ACC++D+LR+YAP+APY D Q+ IF ++ Q L D ++ +
Sbjct: 65 LKHKDVGIRAFTACCLSDILRLYAPDAPYTDA-QLTDIFKLVLSQFEQLGDQENGYHIQQ 123
Query: 113 FYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVKSFMLDVLCPLITES 172
YL+ L +S + +L S + LF + + N ++ + + +L +I+E
Sbjct: 124 TYLITKLLEYRSIVLLADLPSSNNLLIELFHIFYD-PNKSFPARLFNVIGGILGEVISEF 182
Query: 173 DILSHELLDII 183
D + E+L +I
Sbjct: 183 DSVPLEVLRLI 193
>DICTYBASE|DDB_G0275929 [details] [associations]
symbol:pds5 "sister chromatid cohesion protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008156 "negative regulation of DNA replication" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR016024 dictyBase:DDB_G0275929
GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008156 KO:K11267 eggNOG:NOG268017
RefSeq:XP_643624.1 EnsemblProtists:DDB0305112 GeneID:8620211
KEGG:ddi:DDB_G0275929 InParanoid:Q552Q7 OMA:NMIARRI
ProtClustDB:CLSZ2430964 Uniprot:Q552Q7
Length = 1450
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 43/173 (24%), Positives = 85/173 (49%)
Query: 41 IPLALHIAED-HFLSHESKDVQLLIACCIADVLRVYAPEAPYKDPDQVKTIF-LFLIKQL 98
+ + L + D F ++ +++L+ +CC++++ R+YAP P+ D +K +F LF + L
Sbjct: 196 LEIVLEVLIDPKFADNKIFEIRLMTSCCLSEIFRIYAPTLPF-DMVVLKVVFKLFTEQVL 254
Query: 99 NGLKDPKDPAFKRYFYLLENLAYVKSFNMCFELEDSQEIFCALFSLMFKIVNDEHSGKVK 158
G K K F +YF +LE L+ +K F + L DS + F V+ + +
Sbjct: 255 QGDKVDKK-LFPQYFQMLERLSVIKVFAL-LALVDSS-MLTPFFKDCLSRVHGDKEHQPM 311
Query: 159 SFMLDVLCPLITES-DILSHELLDIILMNIVDPQKTQRKNAYLLAKELIVKTN 210
M L I ES + + L + +L ++++ +K + + +++TN
Sbjct: 312 DIMFSTLLNTILESLEEVPTSLWNELLESLIEREKGGVPTSKAIFTHDLIETN 364
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 253 253 0.00083 114 3 11 22 0.39 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 582 (62 KB)
Total size of DFA: 177 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.71u 0.08s 21.79t Elapsed: 00:00:16
Total cpu time: 21.71u 0.08s 21.79t Elapsed: 00:00:19
Start: Thu Aug 15 14:45:03 2013 End: Thu Aug 15 14:45:22 2013