BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10771
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28FY0|TILB_XENTR Protein TILB homolog OS=Xenopus tropicalis GN=lrrc6 PE=2 SV=1
Length = 470
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
VSEDL+R+RAEHN+ EI +LEEI+LHQ+ +E+IE +DKWC+ L+IL L +N+I K+
Sbjct: 4 VSEDLIRRRAEHNNCEIFSLEEISLHQQDLERIEYIDKWCRELKILYLQNNLIGKI 59
>sp|Q9VR52|TILB_DROME Protein TILB OS=Drosophila melanogaster GN=tilB PE=1 SV=1
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++E+LVRK++EHN++ I TLEEI+LHQE IE IE + WC+ L+ILLL SN+I++L
Sbjct: 4 ITEELVRKKSEHNERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARL 59
>sp|B3DH20|TILB_DANRE Protein TILB homolog OS=Danio rerio GN=lrrc6 PE=1 SV=1
Length = 440
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 47/56 (83%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
+SEDL+R+RAEHN+ EI +LEE++LHQ+ I++IE + KWC+ L+IL L +N+I K+
Sbjct: 4 ISEDLIRRRAEHNNGEIFSLEELSLHQQDIQRIEHIHKWCRDLKILYLQNNLIPKI 59
>sp|Q1RMR5|TILB_BOVIN Protein TILB homolog OS=Bos taurus GN=LRRC6 PE=2 SV=1
Length = 472
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++EDL+R+ AEHND I +LEE++LHQ+ IE++E +DKWC+ L+IL L +N+I K+
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKI 59
>sp|O88978|TILB_MOUSE Protein TILB homolog OS=Mus musculus GN=Lrrc6 PE=1 SV=1
Length = 473
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++EDL+R+ AEHND I +LEE++LHQ+ IE++E +DKWC+ L+IL L +N+I K+
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKI 59
>sp|Q86X45|TILB_HUMAN Protein TILB homolog OS=Homo sapiens GN=LRRC6 PE=1 SV=3
Length = 466
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++EDL+R+ AEHND I +LEE++LHQ+ IE++E +DKWC+ L+IL L +N+I K+
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKI 59
>sp|Q4R3F0|TILB_MACFA Protein TILB homolog OS=Macaca fascicularis GN=LRCC6 PE=2 SV=1
Length = 466
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 46/56 (82%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++EDL+R+ AEHND I +LEE++LHQ+ IE++E +DKWC+ L+IL L +N+I K+
Sbjct: 4 ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKI 59
>sp|Q9NJE9|TILB_TRYBB Protein TILB homolog OS=Trypanosoma brucei brucei GN=lrrc6 PE=3
SV=1
Length = 383
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 41/56 (73%)
Query: 42 VSEDLVRKRAEHNDKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
++ DL+R+RAEHN+ + L+E+ALHQ+ IE+IE + C+ L IL L +N IS++
Sbjct: 4 ITTDLLRRRAEHNEGCLSNLKEVALHQQDIERIELIGDACRELEILYLCNNYISRI 59
>sp|Q3ZBN5|ASPN_BOVIN Asporin OS=Bos taurus GN=ASPN PE=2 SV=1
Length = 370
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 58 IGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKLG 98
I + EI L ++K+ + + K+L+I+ LHSN I+K+G
Sbjct: 278 IPRVREIHLENNKLKKVPSGLQELKYLQIIFLHSNSITKVG 318
>sp|Q9SR02|MED14_ARATH Mediator of RNA polymerase II transcription subunit 14
OS=Arabidopsis thaliana GN=MED14 PE=1 SV=1
Length = 1703
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 55 DKEIGTLEEIALHQEHIEKIEALDKWCKHLRILLLHSNIISKL 97
+K++ L+ +A Q+ + ++ AL KWCK + ++ ++ S L
Sbjct: 42 EKKVSLLKYVAKTQQRMLRLNALAKWCKQVPLINYFQDLGSTL 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,089,705
Number of Sequences: 539616
Number of extensions: 1189676
Number of successful extensions: 4493
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4477
Number of HSP's gapped (non-prelim): 23
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)