BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10772
(378 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|308222732|gb|ABK35089.2| semaphorin 2a [Gryllus bimaculatus]
Length = 435
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/241 (73%), Positives = 203/241 (84%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG+YV FFFRETAVEYINCGKSV+SRVARVCK+DTGGKNILSQNWATYLKA
Sbjct: 195 KPNFVGSYDIGQYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNILSQNWATYLKA 254
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ +YKVPGDDT+FYGVFTTS TGL+GSAIC F++ DI+ AF G
Sbjct: 255 RLNCSIPGEFPFYFNEIQSVYKVPGDDTRFYGVFTTSMTGLVGSAICVFTLRDIQEAFRG 314
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS SAWLPVLSSRVPEPRPG CVNDTETLPD+VLNFIRSHPLMD AVAH KP
Sbjct: 315 KFKEQATSASAWLPVLSSRVPEPRPGDCVNDTETLPDTVLNFIRSHPLMDAAVAHEHGKP 374
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICE 274
VF++RDLLFT LVVD ++ ++ + EYIVY+A T R V +D ++ + +
Sbjct: 375 VFFKRDLLFTDLVVDRLKIDLIASIKEYIVYYAGTNNGRVYKVVQWYDEDAEDSRSRLLD 434
Query: 275 S 275
S
Sbjct: 435 S 435
>gi|322787454|gb|EFZ13542.1| hypothetical protein SINV_06809 [Solenopsis invicta]
Length = 479
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/334 (58%), Positives = 232/334 (69%), Gaps = 42/334 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNIL+QNWATYLKA
Sbjct: 6 EPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWATYLKA 65
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 66 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 125
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 126 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 185
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICE 274
VFY+RD++ T LVVD ++ + G +Y VY+A ++ Q + NT D
Sbjct: 186 VFYKRDVMLTRLVVDKLRIDFVGIDLDYTVYYAGSSK-----------QTILNTCD---- 230
Query: 275 SSVGRLKQTVTW------GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF 328
GR+ + V W QS+ L F P +P+ SK+ + SD
Sbjct: 231 ---GRVHKVVQWIDSNGDSQSILLDVFDVTPG----EPIQAMEISKEHKALYVA--SDHR 281
Query: 329 IRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHN 362
I+ +D ++M D N + C H+
Sbjct: 282 IKQID---LVMCTRRYD---------NCLRCVHD 303
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSNT+ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 322 LLQDVSNTTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 381
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 382 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 441
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 265 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 299
>gi|328703580|ref|XP_001948405.2| PREDICTED: semaphorin-2A-like [Acyrthosiphon pisum]
Length = 704
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/219 (83%), Positives = 199/219 (90%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+PDFVGSYDIG+YVFFFFRETAVEYINCGKS+FSRVARVCK+DTGGK+ILS NWATYLKA
Sbjct: 224 KPDFVGSYDIGQYVFFFFRETAVEYINCGKSIFSRVARVCKKDTGGKSILSHNWATYLKA 283
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGE+PFYFNEIQ IYKVP DDT FYGVFTTSTTGLMGSAIC+F +EDI+ AF G
Sbjct: 284 RLNCSIPGEYPFYFNEIQSIYKVPDDDTLFYGVFTTSTTGLMGSAICTFRLEDIDHAFAG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+FKEQA+STSAWLPVLS++VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH+DN+P
Sbjct: 344 RFKEQASSTSAWLPVLSTKVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHKDNEP 403
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY RDL FT LVVDV+ Y VFG Y VY+AAT R
Sbjct: 404 VFYLRDLFFTRLVVDVLDYVVFGNHLHYTVYYAATNEGR 442
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+N+S S+CESSV + TVT+GQSVHLSCFVK+P + P++WYH+SK+KGRY
Sbjct: 532 LLQDVTNSSRSVCESSVVNKRLTVTFGQSVHLSCFVKMPQVLKVYPVTWYHHSKEKGRYM 591
Query: 321 IKF-RSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
+ F R +K+I TV+GG+VI+ E D G+YDC L +LCT NLTVDAH
Sbjct: 592 VSFSRVEKYIATVEGGMVIVGASEEDGGRYDCQLAGALLCTFNLTVDAH 640
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEISR H++LYVASDE ++QI L MC HRYD+CL+
Sbjct: 475 MEISRKHKALYVASDESVRQIYLSMCTHRYDSCLR 509
>gi|195150031|ref|XP_002015958.1| GL10746 [Drosophila persimilis]
gi|194109805|gb|EDW31848.1| GL10746 [Drosophila persimilis]
Length = 658
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/359 (52%), Positives = 245/359 (68%), Gaps = 35/359 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 250 KPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 309
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 310 RLNCSISGEFPFYFNEIQSVYQLPSDKTRFYATFTTSTNGLIGSAVCSFHINEIQAAFNG 369
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 370 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 429
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV----------------- 257
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R +
Sbjct: 430 VYYKRDLVFTKLVVDKIKIDIL--NQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIF 487
Query: 258 -----KVRLLQDVSNTSDSICESSVGRLKQT-VTWGQSVHLSCF--VKLPASMANQPMSW 309
+ + ++S T S+ + R+KQ + + +CF V+ P W
Sbjct: 488 EVAPNEAIQVMEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRCVRDPY------CGW 541
Query: 310 YHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
+ Y++ ++I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 542 DKEANTCRPYELDLL--QYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 598
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 498 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 532
>gi|91077764|ref|XP_968340.1| PREDICTED: similar to semaphorin 2a [Tribolium castaneum]
Length = 724
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/235 (74%), Positives = 200/235 (85%), Gaps = 1/235 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV FFFRETAVEYINCGKSV+SRVARVCK+DTGGKNILSQNWATYLKA
Sbjct: 249 KPNFVGSFDIGDYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNILSQNWATYLKA 308
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDTKFYG FTTST GLMGSAICSF+++DI++AF G
Sbjct: 309 RLNCSIPGEFPFYFNEIQSIYKVPGDDTKFYGTFTTSTNGLMGSAICSFTLDDIQQAFSG 368
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQA+S+SAWLPVLS+RVPEPRPG CVNDTETLPD+VLNFIRSHPLMD AV H KP
Sbjct: 369 KFKEQASSSSAWLPVLSNRVPEPRPGTCVNDTETLPDTVLNFIRSHPLMDSAVMHEHEKP 428
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
VF++RD+ FT LVVD ++ ++ G +Y VY+A T R V V +D TS
Sbjct: 429 VFFKRDVFFTRLVVDKIKVDIGGAVLDYTVYYAGTNEGR-VHKIVEWQRDTDGTS 482
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 92/108 (85%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSV + K VTWGQS+HL CF+K+PA +A+Q ++WYHYSK+KGRY+
Sbjct: 557 LLQDVSNSTVDVCDSSVVKKKMIVTWGQSLHLGCFLKMPAVLASQTITWYHYSKEKGRYK 616
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
I++R DK+I T + GLVI+AV E DAG+YDCW+G ++LC++N+TVDAH
Sbjct: 617 IQYRPDKYIETSEHGLVIIAVTEADAGRYDCWMGASLLCSYNVTVDAH 664
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ +++LYVASD R+KQ+ LVMC RYDNCL+
Sbjct: 500 MEISKENKALYVASDYRVKQVDLVMCNRRYDNCLR 534
>gi|270002844|gb|EEZ99291.1| semaphorin-2a [Tribolium castaneum]
Length = 787
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/235 (74%), Positives = 200/235 (85%), Gaps = 1/235 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV FFFRETAVEYINCGKSV+SRVARVCK+DTGGKNILSQNWATYLKA
Sbjct: 312 KPNFVGSFDIGDYVLFFFRETAVEYINCGKSVYSRVARVCKKDTGGKNILSQNWATYLKA 371
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDTKFYG FTTST GLMGSAICSF+++DI++AF G
Sbjct: 372 RLNCSIPGEFPFYFNEIQSIYKVPGDDTKFYGTFTTSTNGLMGSAICSFTLDDIQQAFSG 431
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQA+S+SAWLPVLS+RVPEPRPG CVNDTETLPD+VLNFIRSHPLMD AV H KP
Sbjct: 432 KFKEQASSSSAWLPVLSNRVPEPRPGTCVNDTETLPDTVLNFIRSHPLMDSAVMHEHEKP 491
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
VF++RD+ FT LVVD ++ ++ G +Y VY+A T R V V +D TS
Sbjct: 492 VFFKRDVFFTRLVVDKIKVDIGGAVLDYTVYYAGTNEGR-VHKIVEWQRDTDGTS 545
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 92/108 (85%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSV + K VTWGQS+HL CF+K+PA +A+Q ++WYHYSK+KGRY+
Sbjct: 620 LLQDVSNSTVDVCDSSVVKKKMIVTWGQSLHLGCFLKMPAVLASQTITWYHYSKEKGRYK 679
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
I++R DK+I T + GLVI+AV E DAG+YDCW+G ++LC++N+TVDAH
Sbjct: 680 IQYRPDKYIETSEHGLVIIAVTEADAGRYDCWMGASLLCSYNVTVDAH 727
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ +++LYVASD R+KQ+ LVMC RYDNCL+
Sbjct: 563 MEISKENKALYVASDYRVKQVDLVMCNRRYDNCLR 597
>gi|242013140|ref|XP_002427273.1| Semaphorin-2A precursor, putative [Pediculus humanus corporis]
gi|212511606|gb|EEB14535.1| Semaphorin-2A precursor, putative [Pediculus humanus corporis]
Length = 693
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 200/216 (92%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYD+G+YV FFFRETAVEYINCGKS++SRVARVCKRDTGGKNILSQNWATYLKA
Sbjct: 216 KPNFVGSYDVGEYVLFFFRETAVEYINCGKSIYSRVARVCKRDTGGKNILSQNWATYLKA 275
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ++YK+PGD+TKFYGVFTT+ GLMGSAICS+ I+DI +AF G
Sbjct: 276 RLNCSIPGEFPFYFNEIQNVYKIPGDNTKFYGVFTTNMNGLMGSAICSYDIKDIIKAFKG 335
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+FKEQATS+SAWLPVLS++VPEPRPG+CVN+TETLPD+VLNFIRSHPLMDEAV H +++P
Sbjct: 336 RFKEQATSSSAWLPVLSNKVPEPRPGECVNNTETLPDTVLNFIRSHPLMDEAVRHENDRP 395
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
VFY+RD+LFTH+VVD ++ + SEY +++AAT+
Sbjct: 396 VFYKRDILFTHVVVDKIKIDSLVDQSEYTLFYAATS 431
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 79/107 (73%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSNTS IC+SS + K TWGQS+HL CF K ++ + +WYHYSK+KG+YQ
Sbjct: 522 LLQDVSNTSVGICDSSTLKKKVVATWGQSIHLGCFPKGAEALHSYASAWYHYSKEKGKYQ 581
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDA 367
I FR DK+I T + GLVI+ V ELDAG+YD WL +LC++N+T+DA
Sbjct: 582 IVFRRDKYIETNEHGLVIIGVSELDAGRYDFWLNGALLCSYNITIDA 628
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 30/35 (85%), Gaps = 1/35 (2%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS +H+++YVA+D R++Q+ L++C + YD+C++
Sbjct: 466 MEISNSHKAIYVATDFRVRQLNLIVC-NNYDSCIR 499
>gi|212283364|gb|ACJ23177.1| semaphorin 2a [Polyrhachis vicina]
Length = 716
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 202/237 (85%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNIL+QNWATYLKA
Sbjct: 236 KPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWATYLKA 295
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 296 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 355
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 356 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 415
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R +++Q + N +S
Sbjct: 416 VFYKRDVMLTRLVVDKLRIDFVGIDLDYTVYYAGSSDGRV----HKVVQWIDNNGES 468
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 544 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 603
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 604 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 663
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 487 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 521
>gi|357610886|gb|EHJ67191.1| putative semaphorin 2a [Danaus plexippus]
Length = 631
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 196/216 (90%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+D+G+YV FFFRETAVEYINCGK+V+SRVAR+CK+DTGGKNILSQNWATYLKA
Sbjct: 208 KPNFVGSFDVGEYVLFFFRETAVEYINCGKAVYSRVARICKKDTGGKNILSQNWATYLKA 267
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDD++FYGVFTT++TGLMGSAIC+F+I DI++AF G
Sbjct: 268 RLNCSIPGEFPFYFNEIQSIYKVPGDDSRFYGVFTTASTGLMGSAICTFTIADIQKAFEG 327
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPV+SSRVPEPRPG+CVNDT +LPD+VLNFIRSHPLMD AV+H KP
Sbjct: 328 KFKEQATSSSAWLPVISSRVPEPRPGKCVNDTSSLPDTVLNFIRSHPLMDSAVSHEHEKP 387
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
++Y+RDL FT LVVD V+ ++ G EY VY+A T
Sbjct: 388 IYYKRDLFFTRLVVDRVKVDMMGHPLEYTVYYAGTN 423
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
L+QDV+N + IC++S+ R + TWGQS+HL FVK+P + + +SWYHY++D GR+
Sbjct: 515 LIQDVANETADICDTSISRKVVSATWGQSLHLGSFVKMPEVLHPRAISWYHYTRD-GRHA 573
Query: 321 IKFR 324
+ F+
Sbjct: 574 VSFK 577
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +SR H SLY ASD R+ Q+ L +CA RYD C++
Sbjct: 458 MALSRIHGSLYAASDRRVLQLRLALCARRYDACVR 492
>gi|345497365|ref|XP_001599891.2| PREDICTED: semaphorin-2A-like [Nasonia vitripennis]
Length = 724
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 195/219 (89%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG++VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNIL+QNWATYLKA
Sbjct: 244 KPNFVGSFDIGEHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWATYLKA 303
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 304 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 363
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 364 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 423
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RD++ T LVVD ++ + G EY VY+A ++ R
Sbjct: 424 VFYKRDVMLTRLVVDKLRIDSAGLDLEYTVYYAGSSDGR 462
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 552 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 611
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI++V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 612 IAYKYGVAGDKFIETSEKGLVIVSVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 671
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEISR H++LYVASD RIKQI LVMC+ RYDNCL+
Sbjct: 495 MEISREHKALYVASDHRIKQIDLVMCSRRYDNCLR 529
>gi|340715165|ref|XP_003396089.1| PREDICTED: semaphorin-2A-like isoform 1 [Bombus terrestris]
gi|340715167|ref|XP_003396090.1| PREDICTED: semaphorin-2A-like isoform 2 [Bombus terrestris]
Length = 711
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/237 (72%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNW+TYLKA
Sbjct: 231 KPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWSTYLKA 290
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 291 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 350
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS+RVPEPRPGQCVNDTE+ PD+VLNFIRSHPLMD A++H + KP
Sbjct: 351 KFKEQATSSSAWLPVLSNRVPEPRPGQCVNDTESFPDTVLNFIRSHPLMDSAISHENEKP 410
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R +++Q + N DS
Sbjct: 411 VFYKRDVMLTRLVVDKLRIDFVGLDLDYTVYYAGSSDGRV----HKVVQWIDNNGDS 463
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN + +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 539 LLQDVSNNTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 598
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG ++LC++N+TVDAH A A +
Sbjct: 599 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGSLLCSYNITVDAHRCSAPAKS 658
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 482 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 516
>gi|332023628|gb|EGI63859.1| Semaphorin-2A [Acromyrmex echinatior]
Length = 555
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 194/219 (88%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNWATYLKA
Sbjct: 75 KPNFVGSFDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWATYLKA 134
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 135 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 194
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 195 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 254
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R
Sbjct: 255 VFYKRDVMLTRLVVDKLRIDFVGIDLDYTVYYAGSSDGR 293
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSNT+ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 383 LLQDVSNTTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 442
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 443 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 502
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 326 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 360
>gi|350414359|ref|XP_003490291.1| PREDICTED: semaphorin-2A-like isoform 2 [Bombus impatiens]
gi|350414361|ref|XP_003490292.1| PREDICTED: semaphorin-2A-like isoform 3 [Bombus impatiens]
Length = 711
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNW+TYLKA
Sbjct: 231 KPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWSTYLKA 290
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 291 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 350
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTE+ PD+VLNFIRSHPLMD A++H + KP
Sbjct: 351 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTESFPDTVLNFIRSHPLMDSAISHENEKP 410
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R +++Q + N DS
Sbjct: 411 VFYKRDVMLTRLVVDKLRIDFVGLDLDYTVYYAGSSDGRV----HKVVQWIDNNGDS 463
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 539 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 598
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG ++LC++N+TVDAH A A +
Sbjct: 599 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGSLLCSYNITVDAHRCSAPAKS 658
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 482 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 516
>gi|350414357|ref|XP_003490290.1| PREDICTED: semaphorin-2A-like isoform 1 [Bombus impatiens]
Length = 734
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNW+TYLKA
Sbjct: 254 KPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWSTYLKA 313
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 314 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 373
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTE+ PD+VLNFIRSHPLMD A++H + KP
Sbjct: 374 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTESFPDTVLNFIRSHPLMDSAISHENEKP 433
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R +++Q + N DS
Sbjct: 434 VFYKRDVMLTRLVVDKLRIDFVGLDLDYTVYYAGSSDGRV----HKVVQWIDNNGDS 486
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 562 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 621
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG ++LC++N+TVDAH A A +
Sbjct: 622 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGSLLCSYNITVDAHRCSAPAKS 681
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 505 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 539
>gi|328782173|ref|XP_392426.3| PREDICTED: semaphorin-2A [Apis mellifera]
gi|380020174|ref|XP_003693969.1| PREDICTED: semaphorin-2A-like [Apis florea]
Length = 734
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNW+TYLKA
Sbjct: 254 KPNFVGSYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWSTYLKA 313
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 314 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 373
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTET PD+VLNFIRSHPLMD A++H + KP
Sbjct: 374 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETFPDTVLNFIRSHPLMDSAISHENEKP 433
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R +++Q + N +S
Sbjct: 434 VFYKRDVMLTRLVVDKLRIDFVGLDLDYTVYYAGSSDGRV----HKVVQWIDNNGES 486
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 562 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 621
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG ++LC++N+TVDAH A A +
Sbjct: 622 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGSLLCSYNITVDAHRCSAPAKS 681
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 505 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 539
>gi|307184882|gb|EFN71160.1| Semaphorin-2A [Camponotus floridanus]
Length = 690
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 193/219 (88%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVG+YDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNIL+QNWATYLKA
Sbjct: 210 KPNFVGAYDIGSHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWATYLKA 269
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I I+ AF G
Sbjct: 270 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHINAIQEAFRG 329
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQA+S+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 330 KFKEQASSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 389
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R
Sbjct: 390 VFYKRDVMLTRLVVDKLRIDFVGIDLDYTVYYAGSSDGR 428
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 518 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 577
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 578 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 637
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 461 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 495
>gi|383860772|ref|XP_003705863.1| PREDICTED: semaphorin-2A-like [Megachile rotundata]
Length = 733
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/237 (72%), Positives = 201/237 (84%), Gaps = 4/237 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNILSQNW+TYLKA
Sbjct: 254 KPNFVGSYDIGIHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILSQNWSTYLKA 313
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 314 RLNCSIPGEFPFYFNEIQSIYKVPGDDTHFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 373
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VP+PRPGQCVNDTET PD+VLNFIRSHPLMD A++H + KP
Sbjct: 374 KFKEQATSSSAWLPVLSNKVPDPRPGQCVNDTETFPDTVLNFIRSHPLMDSAISHENEKP 433
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
VFY+RD++ T LVVD ++ + G EY VY+A ++ R +++Q + N +S
Sbjct: 434 VFYKRDVMLTRLVVDKLKIDFVGLDLEYTVYYAGSSDGRV----HKVVQWIDNNGES 486
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 92/120 (76%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 562 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 621
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG ++LC++N+TVDAH A A +
Sbjct: 622 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGSLLCSYNITVDAHRCSAPAKS 681
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 505 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 539
>gi|307192922|gb|EFN75947.1| Semaphorin-2A [Harpegnathos saltator]
Length = 594
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/238 (73%), Positives = 201/238 (84%), Gaps = 2/238 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDI +VFFFFRETAVEYINCGKSV+SRVARVCKRDTGGKNIL+QNW+TYLKA
Sbjct: 114 KPNFVGSYDIDNHVFFFFRETAVEYINCGKSVYSRVARVCKRDTGGKNILAQNWSTYLKA 173
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ IYKVPGDDT+FYG FTTST GLMGSAICSF I+ I+ AF G
Sbjct: 174 RLNCSIPGEFPFYFNEIQSIYKVPGDDTRFYGTFTTSTNGLMGSAICSFHIDAIQEAFRG 233
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVLS++VPEPRPGQCVNDTETLPD+VLNFIRSHPLMD A++H + KP
Sbjct: 234 KFKEQATSSSAWLPVLSNKVPEPRPGQCVNDTETLPDTVLNFIRSHPLMDSAISHENEKP 293
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
VFY+RD++ T LVVD ++ + G +Y VY+A ++ R KV D + S SI
Sbjct: 294 VFYKRDVMLTRLVVDKLRIDFVGNDLDYTVYYAGSSDGRV--HKVVQWVDSNGESQSI 349
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 4/120 (3%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVSN++ +C+SSVG+ K VTWGQSVHL CFVK+P +ANQ + WYHYSK+KGRYQ
Sbjct: 422 LLQDVSNSTADVCDSSVGKRKLVVTWGQSVHLGCFVKMPEVLANQEVRWYHYSKEKGRYQ 481
Query: 321 IKFR----SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
I ++ DKFI T + GLVI+ V E DAG+YDCWLG +LC++N+TVDAH A A +
Sbjct: 482 IAYKYGAGGDKFIETSEKGLVIVGVNEQDAGRYDCWLGGALLCSYNITVDAHRCSAPAKS 541
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+ H++LYVASD RIKQI LVMC RYDNCL+
Sbjct: 365 MEISKEHKALYVASDHRIKQIDLVMCTRRYDNCLR 399
>gi|8134686|sp|Q9XZC8.1|SEM2A_SCHGR RecName: Full=Semaphorin-2A; Short=Sema-2A; AltName: Full=Sema II;
Flags: Precursor
gi|4809151|gb|AAD30114.1|AF134904_1 semaphorin 2a precursor [Schistocerca gregaria]
Length = 697
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
P+FVGS+D+G+YV FFFRETAVEYINCGKSV+SRVARVCK+D GGKNILSQNWAT+LKA
Sbjct: 221 NPNFVGSFDVGEYVLFFFRETAVEYINCGKSVYSRVARVCKKDVGGKNILSQNWATFLKA 280
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ +YK+P D KF+GVF+TS TGL GSAICSF+++DI+ F G
Sbjct: 281 RLNCSIPGEFPFYFNEIQGVYKMPNTD-KFFGVFSTSVTGLTGSAICSFTLKDIQEVFSG 339
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVL SRVP+PRPG+CVNDTE LPD+VLNFIRSHPLMD AV+H KP
Sbjct: 340 KFKEQATSSSAWLPVLPSRVPDPRPGECVNDTELLPDTVLNFIRSHPLMDGAVSHEGGKP 399
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
VFY+RD+LFT LVVD ++ + G EYIVY+A T+T
Sbjct: 400 VFYKRDVLFTQLVVDKLKVNLVGKNMEYIVYYAGTST 436
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 91/117 (77%), Gaps = 2/117 (1%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+NTS ++CE SV + K VTWGQS+HL CF+K+P +++Q +SW HY+KDKGRY
Sbjct: 528 LLQDVTNTSANLCEHSVMKKKLIVTWGQSIHLGCFLKVPEVLSSQTISWVHYTKDKGRYP 587
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPTR 377
I +R DK+I T + GLV+++V + D+G+YDCWLG ++LC++N+TVDAH AP R
Sbjct: 588 IVYRPDKYIETSEHGLVLISVTDSDSGRYDCWLGGSLLCSYNITVDAHR--CSAPGR 642
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+ +S+ ++SLY ASD ++QI LVMC HRY NCLQ
Sbjct: 471 LHLSKEYKSLYAASDNIVRQIELVMCHHRYSNCLQ 505
>gi|170064517|ref|XP_001867558.1| semaphorin [Culex quinquefasciatus]
gi|167881888|gb|EDS45271.1| semaphorin [Culex quinquefasciatus]
Length = 627
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 158/219 (72%), Positives = 186/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+DTGGKNIL+QNWATYLKA
Sbjct: 155 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDTGGKNILNQNWATYLKA 214
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQD+Y++P D TKFY FTTST GL+GSA+CSF I ++ AF G
Sbjct: 215 RLNCSIAGEFPFYFNEIQDVYQLPSDKTKFYATFTTSTNGLVGSAVCSFDIGEVHAAFAG 274
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS SAWLPVL+S++P+PRPG CVNDT TLPDSVLNFIRSHPLMD AV H N P
Sbjct: 275 KFKEQATSNSAWLPVLNSKIPDPRPGTCVNDTSTLPDSVLNFIRSHPLMDRAVNHEHNNP 334
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RDL+FT LVVD ++ ++ EY VY+ T R
Sbjct: 335 VFYKRDLVFTKLVVDKIKIDIL--NQEYTVYYVGTNAGR 371
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 84/108 (77%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV N + IC++SV + K VT+GQSVHL CFVK+P + +Q ++WYH+SK+KGRY+
Sbjct: 460 LLQDVGNETYDICDTSVLKKKIIVTYGQSVHLGCFVKVPEILKDQSVTWYHHSKEKGRYE 519
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 520 IKYNPTKYIETTERGLVVISVNEADGGRYDCHLGGSLLCSYNITVDAH 567
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS++ +SLYVA+D R+KQ+ L MC RYD+C +
Sbjct: 403 MEISQSRKSLYVATDYRVKQVDLAMCNRRYDSCYR 437
>gi|157111917|ref|XP_001657355.1| semaphorin [Aedes aegypti]
gi|108878254|gb|EAT42479.1| AAEL005993-PA [Aedes aegypti]
Length = 709
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 187/219 (85%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+DTGGKNIL+QNWATYLKA
Sbjct: 250 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDTGGKNILNQNWATYLKA 309
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
R+NCSI GEFPFYFNEIQD+Y++P D +KFY FTTST GL+GSA+CSF I ++ AF G
Sbjct: 310 RINCSISGEFPFYFNEIQDVYQLPSDKSKFYATFTTSTNGLVGSAVCSFDIGEVHGAFAG 369
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS SAWLPVL+S++P+PRPG CVNDT TLPDSVLNFIRSHPLMD+AV H N P
Sbjct: 370 KFKEQATSNSAWLPVLNSKIPDPRPGTCVNDTSTLPDSVLNFIRSHPLMDKAVNHEHNNP 429
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RDL+FT LVVD ++ ++ EY VY+ T R
Sbjct: 430 VFYKRDLVFTKLVVDKIKIDIL--NQEYTVYYIGTNAGR 466
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 84/108 (77%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV N + IC++SV + K VT+GQSVHL CFVK+P + +Q ++WYH+SK+KGRY+
Sbjct: 555 LLQDVGNETYDICDTSVLKKKIIVTYGQSVHLGCFVKVPEILKDQSVTWYHHSKEKGRYE 614
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 615 IKYNPTKYIETTERGLVVISVNEADGGRYDCHLGGSLLCSYNITVDAH 662
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLYVA+D R+KQI L MC RYD+C +
Sbjct: 498 MEISQTRKSLYVATDYRVKQIDLAMCNRRYDSCYR 532
>gi|158296201|ref|XP_316666.4| AGAP006634-PA [Anopheles gambiae str. PEST]
gi|157016398|gb|EAA11400.4| AGAP006634-PA [Anopheles gambiae str. PEST]
Length = 718
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 160/235 (68%), Positives = 197/235 (83%), Gaps = 3/235 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG++V+FFFRETAVEYINCGK+V+SRVARVCK+DTGGKNIL+QNWATYLKA
Sbjct: 247 KPNFVGSFDIGEHVYFFFRETAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKA 306
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
R+NCSI GEFPFYFNEIQD+Y++P D TKFY FTTST GL+GSA+CSF I +I AF G
Sbjct: 307 RINCSISGEFPFYFNEIQDVYQLPTDKTKFYATFTTSTNGLVGSAVCSFDINEIHGAFAG 366
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQA+S SAWLPVL+S++PEPRPG CVNDT TLPDSVLNFIRSHPLMD+AV H N P
Sbjct: 367 KFKEQASSNSAWLPVLNSKIPEPRPGTCVNDTSTLPDSVLNFIRSHPLMDKAVNHEHNNP 426
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
V+Y+RDL+FT LVVD ++ E+ + EY V++ T R ++ V+ L++ + S
Sbjct: 427 VYYKRDLVFTKLVVDKIKIEIL--SQEYTVFYIGTNAGR-IYKIVQYLRNGESKS 478
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 84/108 (77%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV N + IC++SV + K VT+GQSVHL CFVK+P + +Q ++WYH+SK+KGRY+
Sbjct: 552 LLQDVGNETYDICDTSVLKKKIIVTYGQSVHLGCFVKIPEILKDQTVTWYHHSKEKGRYE 611
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 612 IKYNPTKYIETTERGLVVISVNEADGGRYDCHLGGSLLCSYNITVDAH 659
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
ME+S+ +SLYVA+D RIKQI L MC RYDNC +
Sbjct: 495 MELSQKRKSLYVATDYRIKQIDLAMCNRRYDNCFR 529
>gi|312371351|gb|EFR19565.1| hypothetical protein AND_22221 [Anopheles darlingi]
Length = 513
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 153/200 (76%), Positives = 178/200 (89%)
Query: 30 YDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWA 89
+ C QP+FVGS+DIG++V+FFFRETAVEYINCGK+V+SRVARVCK+DTGGKNIL+QNWA
Sbjct: 313 FSACEQPNFVGSFDIGEHVYFFFRETAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWA 372
Query: 90 TYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
TYLKAR+NCSI GEFPFYFNEIQD+Y++P D TKFY FTTST GL+GSA+CSF I +I
Sbjct: 373 TYLKARINCSISGEFPFYFNEIQDVYQLPTDKTKFYATFTTSTNGLVGSAVCSFDINEIH 432
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
AF GKFKEQA+S SAWLPVL+S++PEPRPG CVNDT TLPDSVLNFIRSHPLMD+AV H
Sbjct: 433 GAFAGKFKEQASSNSAWLPVLNSKIPEPRPGTCVNDTSTLPDSVLNFIRSHPLMDKAVNH 492
Query: 210 RDNKPVFYRRDLLFTHLVVD 229
N PV+Y+RDL+FT LVVD
Sbjct: 493 EHNNPVYYKRDLVFTKLVVD 512
>gi|158296205|ref|XP_316667.4| AGAP006636-PA [Anopheles gambiae str. PEST]
gi|157016400|gb|EAA11003.5| AGAP006636-PA [Anopheles gambiae str. PEST]
Length = 679
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/230 (69%), Positives = 190/230 (82%), Gaps = 3/230 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRE AVEYINCGK+V+SRVARVCK+DTGGKNIL+QNWATYLKA
Sbjct: 218 KPNFVGSFDIGEYVYFFFREIAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKA 277
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQD+Y++P D TKFY FTTST GL+GSA+CSFS+ +I AF G
Sbjct: 278 RLNCSISGEFPFYFNEIQDVYQMPTDKTKFYATFTTSTNGLVGSAVCSFSLGEIHSAFAG 337
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS SAWLPV+SS++PEPRPG CV+DT TLPD+VLNFIRSHPLMD AV H P
Sbjct: 338 KFKEQATSNSAWLPVMSSKIPEPRPGTCVDDTTTLPDAVLNFIRSHPLMDRAVTHDYGNP 397
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQD 264
VFY+RDL+ T LVVD + ++ EY+VY+ AT R ++ V+ D
Sbjct: 398 VFYKRDLILTKLVVDKITIDIL--NQEYLVYYLATNEGR-IYKVVQYFHD 444
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 85/115 (73%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LQDV N + IC+++V R K VT+GQSVHL CF ++P + QP++WYH+SK++G
Sbjct: 520 QLGFLQDVGNRTSDICDTNVMRKKIIVTFGQSVHLGCFARVPEILKYQPVTWYHHSKERG 579
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVA 372
RY++++ K I T +GGLV++A+ E D+G+YDC+LG ++LC+ +L VDAH A
Sbjct: 580 RYEVRYSVTKHIETSEGGLVVIAINEADSGRYDCYLGGSLLCSFSLVVDAHRCTA 634
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ ++SLY+ +D RIKQI LVMC RYD+C +
Sbjct: 466 MRLSQRYKSLYIGTDSRIKQIDLVMCNRRYDSCYR 500
>gi|321469350|gb|EFX80330.1| hypothetical protein DAPPUDRAFT_51392 [Daphnia pulex]
Length = 771
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 184/215 (85%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGSYDIG YV+FFFRETAVEYINCGK+V+SRVARVCK+D GGKNILSQNWAT+LKA
Sbjct: 289 KPNFVGSYDIGDYVYFFFRETAVEYINCGKNVYSRVARVCKKDNGGKNILSQNWATFLKA 348
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEI+ +YKVPGDDT+FY VFTT GL GSAIC F+ D+ AF+G
Sbjct: 349 RLNCSIPGEFPFYFNEIRTVYKVPGDDTRFYAVFTTCQNGLTGSAICVFTTADVHTAFLG 408
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQA+S+SAWLPVLSS+VPEPRPGQCVNDT+TLPD+VLNFIR+HPLMDEAV+H P
Sbjct: 409 KFKEQASSSSAWLPVLSSKVPEPRPGQCVNDTQTLPDTVLNFIRNHPLMDEAVSHESGVP 468
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
VF++ D+ F+ LVV+ ++ E Y VY+A T
Sbjct: 469 VFFKGDVAFSSLVVERLKVEDPVDVKHYTVYYAGT 503
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 85/112 (75%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDVS++S IC++ + + + VTWGQ+VHLSC +KLP M++ P++WY+YS++KG+YQ
Sbjct: 598 LLQDVSSSSPGICDACIAKKRLLVTWGQAVHLSCAIKLPEPMSSMPVTWYYYSREKGQYQ 657
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVA 372
+ FR DK+I+T + G+VIM V E +AG+YDC LG LC++N+TVD A
Sbjct: 658 LSFRPDKYIQTAEQGMVIMGVTEQEAGRYDCRLGADTLCSYNITVDTQRCAA 709
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS H+S+Y SD RI+Q+ +VMC RYDNCL+
Sbjct: 541 MEISPKHKSIYATSDHRIRQVNMVMCNGRYDNCLR 575
>gi|198456785|ref|XP_002138304.1| GA24470 [Drosophila pseudoobscura pseudoobscura]
gi|198135748|gb|EDY68862.1| GA24470 [Drosophila pseudoobscura pseudoobscura]
Length = 722
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 184/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 250 KPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 309
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 310 RLNCSISGEFPFYFNEIQSVYQLPSDKTRFYATFTTSTNGLIGSAVCSFHINEIQAAFNG 369
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 370 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 429
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 430 VYYKRDLVFTKLVVDKIKIDIL--NQEYIVYYVGTNLGR 466
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 86/111 (77%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 552 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 611
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I + K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 612 RYEIHYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 662
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 498 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 532
>gi|312381645|gb|EFR27350.1| hypothetical protein AND_06001 [Anopheles darlingi]
Length = 633
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/219 (72%), Positives = 184/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP+FVGS+DIG++V+FFFRE AVEYINCGK+V+SRVARVCK+DTGGKNIL+QNWATYLKA
Sbjct: 171 QPNFVGSFDIGEHVYFFFREIAVEYINCGKAVYSRVARVCKKDTGGKNILNQNWATYLKA 230
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQD+Y++P D TKFY FTTST GL+GSA+CSFS+ +I AF G
Sbjct: 231 RLNCSIAGEFPFYFNEIQDVYQMPTDKTKFYATFTTSTNGLVGSAVCSFSLGEIHGAFSG 290
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS SAWLPV+SS++PEPRPG CV DT TLPDSVLNFIRSHPLMD AV H P
Sbjct: 291 KFKEQATSNSAWLPVMSSKIPEPRPGTCVEDTTTLPDSVLNFIRSHPLMDRAVGHDYGNP 350
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
VFY+RDL+ T LVVD + ++ EY+VY+ AT R
Sbjct: 351 VFYKRDLILTKLVVDKITIDIL--NQEYLVYYLATNEGR 387
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 84/115 (73%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LQDV N + IC+++V R K VT+GQSVHL CF ++P + QP++WYH+SK++G
Sbjct: 474 QLGFLQDVGNRTSDICDTNVMRKKIIVTFGQSVHLGCFARVPEILKYQPVTWYHHSKERG 533
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVA 372
RY++++ K I T +GGLV++A+ E D G+YDC+LG ++LC+ +L VDAH A
Sbjct: 534 RYEVRYSVTKHIETSEGGLVVIAINESDGGRYDCYLGGSLLCSFSLVVDAHRCTA 588
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ +RSLY+ +D RIKQI LVMC RYD+C +
Sbjct: 420 MRLSQRYRSLYIGTDSRIKQIDLVMCNRRYDSCYR 454
>gi|195429964|ref|XP_002063027.1| GK21702 [Drosophila willistoni]
gi|194159112|gb|EDW74013.1| GK21702 [Drosophila willistoni]
Length = 721
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 249 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 308
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 309 RLNCSISGEFPFYFNEIQSVYQLPTDKTRFYATFTTSTNGLIGSAVCSFHINEIQAAFNG 368
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVP+PRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 369 KFKEQSSSNSAWLPVLNSRVPDPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 428
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 429 VYYKRDLVFTKLVVDKIKIDIL--NQEYIVYYVGTNLGR 465
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 551 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 610
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 611 RYEIKYSPIKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 661
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 497 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 531
>gi|194757335|ref|XP_001960920.1| GF13604 [Drosophila ananassae]
gi|190622218|gb|EDV37742.1| GF13604 [Drosophila ananassae]
Length = 721
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 249 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 308
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++FY FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 309 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFYATFTTSTNGLIGSAVCSFHINEIQAAFNG 368
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 369 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 428
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 429 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 465
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 551 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 610
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 611 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 661
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 497 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 531
>gi|41058083|gb|AAR99105.1| RE45189p [Drosophila melanogaster]
Length = 697
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|24654174|ref|NP_725586.1| Sema-2a, isoform C [Drosophila melanogaster]
gi|21627096|gb|AAM68500.1| Sema-2a, isoform C [Drosophila melanogaster]
Length = 697
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|195334955|ref|XP_002034142.1| GM21705 [Drosophila sechellia]
gi|194126112|gb|EDW48155.1| GM21705 [Drosophila sechellia]
Length = 697
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQTAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|195583966|ref|XP_002081787.1| GD11202 [Drosophila simulans]
gi|194193796|gb|EDX07372.1| GD11202 [Drosophila simulans]
Length = 697
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|17137800|ref|NP_477507.1| Sema-2a, isoform A [Drosophila melanogaster]
gi|19549754|ref|NP_599130.1| Sema-2a, isoform B [Drosophila melanogaster]
gi|81175194|sp|Q24323.2|SEM2A_DROME RecName: Full=Semaphorin-2A; AltName: Full=Semaphorin-II;
Short=Sema II; Flags: Precursor
gi|7302917|gb|AAF57989.1| Sema-2a, isoform A [Drosophila melanogaster]
gi|7302918|gb|AAF57990.1| Sema-2a, isoform B [Drosophila melanogaster]
gi|20151989|gb|AAM11354.1| LD09561p [Drosophila melanogaster]
gi|21711679|gb|AAM75030.1| LD09306p [Drosophila melanogaster]
gi|220943556|gb|ACL84321.1| Sema-2a-PA [synthetic construct]
Length = 724
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 252 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 311
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 312 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 371
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 372 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 431
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 432 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 468
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 554 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 613
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 614 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 664
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 500 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 534
>gi|195488161|ref|XP_002092197.1| GE11800 [Drosophila yakuba]
gi|194178298|gb|EDW91909.1| GE11800 [Drosophila yakuba]
Length = 697
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|194882491|ref|XP_001975344.1| GG20610 [Drosophila erecta]
gi|190658531|gb|EDV55744.1| GG20610 [Drosophila erecta]
Length = 697
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 225 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 285 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 344
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 345 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 405 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 441
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 527 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 586
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 587 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 637
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 473 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 507
>gi|224465291|gb|ACN43740.1| RT01502p [Drosophila melanogaster]
Length = 699
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 227 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 287 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 346
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 347 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 406
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 407 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 443
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 529 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 588
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 589 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 639
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 475 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 509
>gi|436557|gb|AAC37187.1| semaphorin-II [Drosophila melanogaster]
Length = 706
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 234 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 293
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 294 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 353
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 354 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 413
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 414 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 450
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 536 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 595
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 596 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 646
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 482 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 516
>gi|45552663|ref|NP_995856.1| Sema-2a, isoform D [Drosophila melanogaster]
gi|45445522|gb|AAS64837.1| Sema-2a, isoform D [Drosophila melanogaster]
Length = 701
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 229 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 288
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 289 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 348
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 349 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 408
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 409 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 445
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 531 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 590
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 591 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 641
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 477 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 511
>gi|195026294|ref|XP_001986224.1| GH21241 [Drosophila grimshawi]
gi|193902224|gb|EDW01091.1| GH21241 [Drosophila grimshawi]
Length = 701
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 184/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 229 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 288
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +++ AF G
Sbjct: 289 RLNCSISGEFPFYFNEIQSVYQLPNDKTRFYATFTTSTNGLIGSAVCSFHINEVQAAFNG 348
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVP+PRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 349 KFKEQSSSNSAWLPVLNSRVPDPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 408
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EY VY+ T R
Sbjct: 409 VYYKRDLVFTKLVVDKIKIDIL--NQEYTVYYVGTNLGR 445
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 85/108 (78%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKD+GRY+
Sbjct: 534 LLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDRGRYE 593
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 594 IKYNPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 641
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLYV +D RIKQI L MC RYDNC +
Sbjct: 477 MEISQTRKSLYVGTDHRIKQIDLAMCNRRYDNCFR 511
>gi|195122104|ref|XP_002005552.1| GI20528 [Drosophila mojavensis]
gi|193910620|gb|EDW09487.1| GI20528 [Drosophila mojavensis]
Length = 720
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 183/219 (83%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 248 KPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 307
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +++ AF G
Sbjct: 308 RLNCSISGEFPFYFNEIQSVYQLPNDKTRFYATFTTSTNGLIGSAVCSFHINEVQAAFNG 367
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVP+PRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 368 KFKEQSSSNSAWLPVLNSRVPDPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 427
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EY VY+ T R
Sbjct: 428 VYYKRDLVFTKLVVDKIKIDIL--NQEYTVYYVGTNLGR 464
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKD+G
Sbjct: 550 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDRG 609
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 610 RYEIKYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 660
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLYV +D RIKQI L MC RYDNC +
Sbjct: 496 MEISQTRKSLYVGTDHRIKQIDLAMCNRRYDNCFR 530
>gi|195384291|ref|XP_002050851.1| GJ22377 [Drosophila virilis]
gi|194145648|gb|EDW62044.1| GJ22377 [Drosophila virilis]
Length = 701
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 183/219 (83%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 229 KPNFVGSFDIGDYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 288
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D T+FY FTTST GL+GSA+CSF I +++ AF G
Sbjct: 289 RLNCSISGEFPFYFNEIQSVYQLPTDKTRFYATFTTSTNGLIGSAVCSFHINEVQAAFNG 348
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVP+PRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 349 KFKEQSSSNSAWLPVLNSRVPDPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 408
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EY VY+ T R
Sbjct: 409 VYYKRDLVFTKLVVDKIKIDIL--NQEYTVYYVGTNLGR 445
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKD+G
Sbjct: 531 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDRG 590
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+IK+ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 591 RYEIKYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 641
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLYV +D RIKQI L MC RYDNC +
Sbjct: 477 MEISQTRKSLYVGTDHRIKQIDLAMCNRRYDNCFR 511
>gi|195488190|ref|XP_002092209.1| GE11790 [Drosophila yakuba]
gi|194178310|gb|EDW91921.1| GE11790 [Drosophila yakuba]
Length = 783
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 297 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 356
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 357 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 416
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 417 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 476
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ E E++VYF ATT+
Sbjct: 477 VDHEFGNPVFFKRDVILTKLVVDKIRIEKL--NQEFLVYFVATTS 519
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 608 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 667
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 668 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 718
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 554 MTLSQKTGSLYVATDHQVKQIDIAMCARRYDSCFR 588
>gi|195026254|ref|XP_001986216.1| GH21236 [Drosophila grimshawi]
gi|193902216|gb|EDW01083.1| GH21236 [Drosophila grimshawi]
Length = 735
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 184/225 (81%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS+DIG +V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 245 KYDSKLLDKPNFVGSFDIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 304
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DD+KFY FTT+T GL+GSA+CS+ I
Sbjct: 305 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPNDDSKFYATFTTNTNGLIGSAVCSYDIR 364
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 365 DINAAFEGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 424
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVFY+RD++ T LVVD ++ + E++VYF AT+T
Sbjct: 425 VDHEFGNPVFYKRDVILTRLVVDKIRIDKL--NQEFLVYFVATST 467
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 556 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPDVLRKKQTRWYHHSTEKG 615
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 616 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 666
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+ +S+ SLY+A+D ++KQI L MCA RYD+C +
Sbjct: 502 LTLSQKTASLYLATDHQVKQIDLAMCARRYDSCFR 536
>gi|195122082|ref|XP_002005541.1| GI20523 [Drosophila mojavensis]
gi|193910609|gb|EDW09476.1| GI20523 [Drosophila mojavensis]
Length = 749
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 184/225 (81%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS+DIG +V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 247 KYDSKLLDKPNFVGSFDIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 306
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DD+KFY FTT+T GL+GSA+CS+ I
Sbjct: 307 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPNDDSKFYATFTTNTNGLIGSAVCSYDIR 366
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 367 DINAAFEGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 426
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVFY+RD++ T LVVD ++ + E++VYF AT+T
Sbjct: 427 VDHEFGNPVFYKRDVILTRLVVDKIRIDKL--NQEFLVYFVATST 469
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 558 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPDVLRKKQTRWYHHSTEKG 617
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 618 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 668
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+ +S+ SLY+A+D ++KQI L MCA RYD+C +
Sbjct: 504 LTLSQKTASLYLATDHQVKQIDLAMCARRYDSCFR 538
>gi|60677933|gb|AAX33473.1| RE07394p [Drosophila melanogaster]
Length = 798
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 298 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 357
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 358 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 417
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 418 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 477
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 478 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 609 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 668
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 669 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 719
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 555 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 589
>gi|195583934|ref|XP_002081771.1| GD11191 [Drosophila simulans]
gi|194193780|gb|EDX07356.1| GD11191 [Drosophila simulans]
Length = 784
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 298 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 357
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 358 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 417
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 418 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 477
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 478 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 609 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 668
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 669 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 719
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 555 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 589
>gi|195334927|ref|XP_002034128.1| GM21695 [Drosophila sechellia]
gi|194126098|gb|EDW48141.1| GM21695 [Drosophila sechellia]
Length = 784
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 298 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMMSQ 357
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 358 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 417
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 418 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 477
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 478 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 609 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 668
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 669 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 719
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 555 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 589
>gi|442623921|ref|NP_001261024.1| Semaphorin-2b, isoform D [Drosophila melanogaster]
gi|440214449|gb|AGB93556.1| Semaphorin-2b, isoform D [Drosophila melanogaster]
Length = 824
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 299 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 358
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 359 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 418
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 419 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 478
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 479 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 521
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 610 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 669
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 670 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 720
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 556 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 590
>gi|221330323|ref|NP_001137680.1| Semaphorin-2b, isoform B [Drosophila melanogaster]
gi|85857624|gb|ABC86347.1| IP13724p [Drosophila melanogaster]
gi|220902247|gb|ACL83134.1| Semaphorin-2b, isoform B [Drosophila melanogaster]
Length = 785
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 299 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 358
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 359 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 418
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 419 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 478
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 479 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 521
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 610 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 669
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 670 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 720
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 556 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 590
>gi|85725032|ref|NP_001033952.1| Semaphorin-2b, isoform A [Drosophila melanogaster]
gi|442623923|ref|NP_001261025.1| Semaphorin-2b, isoform C [Drosophila melanogaster]
gi|84795748|gb|AAM68522.2| Semaphorin-2b, isoform A [Drosophila melanogaster]
gi|378548252|gb|AFC17500.1| FI18622p1 [Drosophila melanogaster]
gi|440214450|gb|AGB93557.1| Semaphorin-2b, isoform C [Drosophila melanogaster]
Length = 784
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 298 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 357
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 358 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 417
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 418 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 477
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 478 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 520
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 609 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 668
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 669 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 719
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 555 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 589
>gi|195429944|ref|XP_002063017.1| GK21697 [Drosophila willistoni]
gi|194159102|gb|EDW74003.1| GK21697 [Drosophila willistoni]
Length = 731
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 183/224 (81%), Gaps = 4/224 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS+DIG YV+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 244 KYDSKLLDKPNFVGSFDIGDYVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 303
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 304 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPNDDTKFYATFTTNTNGLIGSAVCSYDIR 363
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 364 DINAAFEGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 423
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
V H PVF++RD++ T LVVD ++ + E++VYF +T+
Sbjct: 424 VDHEFGNPVFFKRDIILTRLVVDKIRIDKL--NQEFLVYFVSTS 465
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 555 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 614
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 615 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 665
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ SLY+A+D ++KQI + MCA RYD+C +
Sbjct: 501 MTLSQKTGSLYIATDHQVKQIDIAMCARRYDSCFR 535
>gi|194757311|ref|XP_001960908.1| GF13596 [Drosophila ananassae]
gi|190622206|gb|EDV37730.1| GF13596 [Drosophila ananassae]
Length = 742
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 256 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 315
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 316 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 375
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 376 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 435
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 436 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 478
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 567 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 626
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L ++LC++ +TVDAH
Sbjct: 627 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGSLLCSYGVTVDAH 677
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ S+YVA+D ++KQI + MCA RYD+C +
Sbjct: 513 MTLSQKTGSIYVATDHQVKQIDIAMCARRYDSCFR 547
>gi|324096496|gb|ADY17777.1| RT10064p [Drosophila melanogaster]
Length = 712
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 226 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 285
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 286 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 345
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 346 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 405
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 406 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 448
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 537 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 596
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 597 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 647
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 483 MTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 517
>gi|194882513|ref|XP_001975355.1| GG20603 [Drosophila erecta]
gi|190658542|gb|EDV55755.1| GG20603 [Drosophila erecta]
Length = 783
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/225 (67%), Positives = 185/225 (82%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK +++Q
Sbjct: 297 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKSDRGGKYLINQ 356
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 357 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPKDDTKFYATFTTNTNGLIGSAVCSYDIR 416
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 417 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTGTLPDSVLNFIRKHPLMDKA 476
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 477 VDHEFGNPVFFKRDVILTKLVVDKIRIDKL--NQEFLVYFVATTS 519
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 608 QLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 667
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 668 RYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 718
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
M +S+ SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 554 MTLSQKTGSLYVATDHQVKQIDIAMCARRYDSCFR 588
>gi|195384275|ref|XP_002050843.1| GJ22373 [Drosophila virilis]
gi|194145640|gb|EDW62036.1| GJ22373 [Drosophila virilis]
Length = 744
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/225 (67%), Positives = 184/225 (81%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG +V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 251 KYDSKLLDKPNFVGSFEIGDFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 310
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DD+KFY FTT+T GL+GSA+CS+ I
Sbjct: 311 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPNDDSKFYATFTTNTNGLIGSAVCSYDIR 370
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQA+S SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 371 DINAAFEGKFKEQASSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 430
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVFY+RD++ T LVVD ++ + E++VYF AT+T
Sbjct: 431 VDHEFGNPVFYKRDVILTRLVVDKIRIDKL--NQEFLVYFVATST 473
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 562 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPDVLRKKQTRWYHHSTEKG 621
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 622 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 672
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+ +S+ SLY+A+D ++KQI L MCA RYD+C +
Sbjct: 508 LTLSQKTASLYLATDHQVKQIDLAMCARRYDSCFR 542
>gi|391343223|ref|XP_003745912.1| PREDICTED: semaphorin-2A-like [Metaseiulus occidentalis]
Length = 674
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 181/219 (82%), Gaps = 4/219 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRE+AVEYINCGKSV+SRVAR+CKRDTGGKNIL++NWATYLKA
Sbjct: 214 RPNFVGSFDIGEYVYFFFRESAVEYINCGKSVYSRVARICKRDTGGKNILNKNWATYLKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPG++PFYFNEIQ +YK+PGDD FY VFTT GL GSA+C+FS++ I F G
Sbjct: 274 RLNCSIPGDYPFYFNEIQSVYKIPGDDRMFYAVFTTPMNGLYGSAVCAFSLDSINEVFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ TS+SAWLPVLSS+VPEPRPG CVNDT+TLPDSVLNFIR H LMD AV H +P
Sbjct: 334 KFKEQETSSSAWLPVLSSKVPEPRPGSCVNDTQTLPDSVLNFIRGHSLMDSAVGHSGGRP 393
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V++R +++FT L V + EV G EY +++A + R
Sbjct: 394 VYHRANVVFTSLAVH--REEVEGV--EYTIHYAGSRDGR 428
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
+QDV+ S+C +S+ R + WG+++HL+ V QP W H +
Sbjct: 518 FIQDVAGVMPSVCAASLKRRETRAFWGETIHLATCVDPQRHPQGQPPQWRHNG-----VE 572
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWL--GNTVLCTHNLTVDAHSNVA 372
I KF+ T DGGLVIM + DAG+Y+ L +C HN+T+D + A
Sbjct: 573 IVMGPRKFL-TWDGGLVIMGANQRDAGRYEQSLLPNGGPICAHNVTLDTQTCTA 625
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS HR+L+VASD + Q+ LVMC R+ C Q
Sbjct: 461 MEISTKHRALFVASDSGVVQLDLVMCRTRHKTCNQ 495
>gi|390179713|ref|XP_001360453.3| GA30014 [Drosophila pseudoobscura pseudoobscura]
gi|388859941|gb|EAL25028.3| GA30014 [Drosophila pseudoobscura pseudoobscura]
Length = 766
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 183/225 (81%), Gaps = 4/225 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK V+SRVARVCK D GGK ++SQ
Sbjct: 268 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKEVYSRVARVCKNDRGGKYMISQ 327
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DD+KFY FTT+T GL+GSA+CS+ I
Sbjct: 328 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPSDDSKFYATFTTNTNGLIGSAVCSYDIR 387
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQA+S SAWLPVL+ +VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 388 DINAAFEGKFKEQASSNSAWLPVLNQKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 447
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF AT++
Sbjct: 448 VDHEFGNPVFFKRDIILTKLVVDKIRIDKL--NQEFLVYFVATSS 490
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 83/111 (74%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC++SV R + T ++GQ++HLSCFVK+P + + WYH+S +KG
Sbjct: 579 QLGLLQDVANETSGICDTSVLRKRVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKG 638
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY++++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 639 RYEVRYTPTKYIETNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 689
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 3 ISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+S+ SLY+A+D ++KQI + MCA RYD+C +
Sbjct: 527 LSQKTGSLYLATDHQVKQIDIAMCARRYDSCFR 559
>gi|427788923|gb|JAA59913.1| Putative semaphorin [Rhipicephalus pulchellus]
Length = 704
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/272 (58%), Positives = 199/272 (73%), Gaps = 11/272 (4%)
Query: 19 KQIALVMCAHRYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKR 76
+Q M +YD+ +P+FVGS+DIG +VFFFFRE+AVEYINCGK ++SRVARVCK+
Sbjct: 206 EQSEFFMRTLKYDSMWLDKPNFVGSFDIGDHVFFFFRESAVEYINCGKVIYSRVARVCKK 265
Query: 77 DTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTST-TGL 135
DTGGKNIL+ NWAT+LKARLNCS+PGE+PFYFNEIQ +YK P DD+ Y VFTTS G
Sbjct: 266 DTGGKNILTHNWATFLKARLNCSLPGEYPFYFNEIQAVYKFPDDDSNVYAVFTTSLHGGP 325
Query: 136 MGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLN 195
GSA+CSF + DI+ AF GKFKEQ TS+SAWLPVL+S+VPEPRPG+CVN T+TLPD+VLN
Sbjct: 326 HGSAVCSFRLSDIQGAFGGKFKEQKTSSSAWLPVLTSQVPEPRPGRCVNSTKTLPDAVLN 385
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT---TL 252
F+R+H LMD AV +PVFYR +++F L V V +V G +Y+VYFA T
Sbjct: 386 FLRTHTLMDSAVPQSGGRPVFYRENVVFLSLAVHKV--DVDGV--DYLVYFAGTRDGLVY 441
Query: 253 RTVFVKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ V K R Q SN D I E+S G +T+
Sbjct: 442 KIVEWKDRSGQSFSNLVDVI-EASPGEPVRTI 472
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA------------NQPMS 308
LQDVSN + ICE SV R + WG+SVHLSC P M N+
Sbjct: 529 FLQDVSNATPDICEESVRRRQLHAHWGESVHLSCQGHHPELMEPPAGTTGPGTTHNKVPL 588
Query: 309 WYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT-VLCTHNLTVDA 367
WYH + R + + DK+I T GLV+MA+ E D+G YD L + LC++NLTVDA
Sbjct: 589 WYH-QHGRERRLVTPKRDKYIHTTGHGLVLMALTERDSGHYDLHLESVGTLCSYNLTVDA 647
Query: 368 HS 369
+
Sbjct: 648 ET 649
>gi|195150059|ref|XP_002015972.1| GL10736 [Drosophila persimilis]
gi|194109819|gb|EDW31862.1| GL10736 [Drosophila persimilis]
Length = 465
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 135/191 (70%), Positives = 160/191 (83%), Gaps = 2/191 (1%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK V+SRVARVCK D GGK ++SQ
Sbjct: 272 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKEVYSRVARVCKNDRGGKYMISQ 331
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DD+KFY FTT+T GL+GSA+CS+ I
Sbjct: 332 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPSDDSKFYATFTTNTNGLIGSAVCSYDIR 391
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQA+S SAWLPVL+ +VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 392 DINAAFEGKFKEQASSNSAWLPVLNQKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 451
Query: 207 VAHRDNKPVFY 217
V H PVF+
Sbjct: 452 VDHEFGNPVFF 462
>gi|260799260|ref|XP_002594615.1| hypothetical protein BRAFLDRAFT_279857 [Branchiostoma floridae]
gi|229279850|gb|EEN50626.1| hypothetical protein BRAFLDRAFT_279857 [Branchiostoma floridae]
Length = 452
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 155/227 (68%), Gaps = 10/227 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ S++ G VFFFF+ETAVEYINCGK+++SRVARVCK D GG+ +L W TY+KA
Sbjct: 145 EPSFIKSFEHGNKVFFFFKETAVEYINCGKTIYSRVARVCKDDQGGQRVLQNRWTTYMKA 204
Query: 95 RLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PGE+PFYF+EIQ D+ +V GD + Y VFTT + GSA+C+F +E+I A
Sbjct: 205 RLNCSVPGEYPFYFDEIQAMTDLIQV-GDSYRMYAVFTTPQNSISGSAVCAFDMENITEA 263
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRD 211
F GK+KEQ T+ S WLPV +RVP PRPG CVN+++ +PD+ LNF+++HPLMD AV
Sbjct: 264 FDGKYKEQETTQSTWLPVPPNRVPSPRPGNCVNNSKLVPDTTLNFVKTHPLMDSAVGAWG 323
Query: 212 NKPVFYRR-DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV 257
+P+F + FT + VD ++V F T T + + +
Sbjct: 324 GEPLFIKTGSARFTAIAVDTE-----AGIGNHLVMFIGTNTGKVLKI 365
>gi|339249307|ref|XP_003373641.1| semaphorin-2A [Trichinella spiralis]
gi|316970190|gb|EFV54168.1| semaphorin-2A [Trichinella spiralis]
Length = 738
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 156/227 (68%), Gaps = 14/227 (6%)
Query: 35 QPDFVGSYDIGK-YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
+P+FV ++D+G YV++FFRE AVEY++CG ++SRV R+CK DTGG+N+L Q W ++ K
Sbjct: 255 EPNFVAAFDVGDGYVYYFFRELAVEYMSCGTVIYSRVGRICKSDTGGRNLLKQTWTSFFK 314
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCSI GEFPFYFNEIQD+YKV G +T FY F+T G GSAIC +++ +I+
Sbjct: 315 ARLNCSISGEFPFYFNEIQDVYKVSGSNQETLFYATFSTGENGFSGSAICVYTLSEIKAV 374
Query: 152 F-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
F FK Q + W + S+ P PRPGQCV D++TL D+ L+F+++H LMD AV+H+
Sbjct: 375 FDSSPFKGQVSPLHVWQALPSTETPTPRPGQCVRDSKTLSDTTLHFVKTHTLMDRAVSHQ 434
Query: 211 DNK------PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
+NK P+FYR+D++ LVVD+ V G S Y V +AA+
Sbjct: 435 NNKFRSPEGPLFYRKDVILQKLVVDI----VVGEDSSYPVIYAASNN 477
>gi|37724884|gb|AAO18686.1| semaphorin 2a [Trichinella spiralis]
Length = 676
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 156/227 (68%), Gaps = 14/227 (6%)
Query: 35 QPDFVGSYDIGK-YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
+P+FV ++D+G YV++FFRE AVEY++CG ++SRV R+CK DTGG+N+L Q W ++ K
Sbjct: 189 EPNFVAAFDVGDGYVYYFFRELAVEYMSCGTVIYSRVGRICKSDTGGRNLLKQTWTSFFK 248
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCSI GEFPFYFNEIQD+YKV G +T FY F+T G GSAIC +++ +I+
Sbjct: 249 ARLNCSISGEFPFYFNEIQDVYKVSGSNQETLFYATFSTGENGFSGSAICVYTLSEIKAV 308
Query: 152 F-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
F FK Q + W + S+ P PRPGQCV D++TL D+ L+F+++H LMD AV+H+
Sbjct: 309 FDSSPFKGQVSPLHVWQALPSTETPTPRPGQCVRDSKTLSDTTLHFVKTHTLMDRAVSHQ 368
Query: 211 DNK------PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
+NK P+FYR+D++ LVVD+ V G S Y V +AA+
Sbjct: 369 NNKFRSPEGPLFYRKDVILQKLVVDI----VVGEDSSYPVIYAASNN 411
>gi|242007665|ref|XP_002424651.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
gi|212508125|gb|EEB11913.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
Length = 797
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 145/202 (71%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G YV+FFFRETAVEYINCGK+V+SRVARVCK D GG + L + W ++LK+R
Sbjct: 181 PNFVNSMTQGDYVYFFFRETAVEYINCGKTVYSRVARVCKYDKGGPHRLRERWTSFLKSR 240
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG+FPFYFNEIQ + G + + YGVFTT + GSA+C+FS+EDI
Sbjct: 241 LNCSVPGDFPFYFNEIQSTTDLIEGTYGGINAQLIYGVFTTPPNSISGSAVCAFSLEDIT 300
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+ F G FKEQ + TS WLPVL+++VP+PRPGQCVND+ TLPD LNF+ +H LMDE+V
Sbjct: 301 KTFEGSFKEQESLTSNWLPVLNTKVPDPRPGQCVNDSRTLPDLTLNFVENHSLMDESVPS 360
Query: 210 RDNKPVFYRRDL--LFTHLVVD 229
+P+ R + FT + VD
Sbjct: 361 FFKQPIVIRANFHYRFTQIAVD 382
>gi|328716585|ref|XP_001952857.2| PREDICTED: semaphorin-1A-like [Acyrthosiphon pisum]
Length = 768
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 149/228 (65%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S+ G +V+FFFRETAVEYINCGK+VFSRVARVCK D GG L W +YLK+R
Sbjct: 208 PHFVHSFAHGDFVYFFFRETAVEYINCGKNVFSRVARVCKNDRGGPQQLKNRWTSYLKSR 267
Query: 96 LNCSIPGEFPFYFNEIQD----IYKVPGDDTKF--YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGEFPFYFNEIQ + V G F YGVFTT + GSA+C+FS+ D+
Sbjct: 268 LNCSVPGEFPFYFNEIQSSTDLVQGVYGTKQHFMMYGVFTTPVNSITGSAVCAFSLSDVL 327
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+F G+FKEQ + WLPV S+VP+PRPGQC ND+ TLPD LNFI+SH LMDEAV
Sbjct: 328 DSFEGEFKEQTYMNNNWLPVPGSKVPDPRPGQCANDSRTLPDLTLNFIKSHSLMDEAVRS 387
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R + FT + VD + G T Y V F T + + +
Sbjct: 388 FYQQPIIVRTSVNYRFTVIAVDPQVKAIDGKT--YDVLFIGTDSGKVL 433
>gi|241702926|ref|XP_002411954.1| Semaphorin-1A, putative [Ixodes scapularis]
gi|215504929|gb|EEC14423.1| Semaphorin-1A, putative [Ixodes scapularis]
Length = 733
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 147/228 (64%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S YV+FFFRE+AVEYINCGK+V+SRVARVC RD GG + Q W ++LKAR
Sbjct: 204 PNFVSSIYFEDYVYFFFRESAVEYINCGKTVYSRVARVCTRDKGGPHKFQQRWTSFLKAR 263
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+ PFYFNEIQ + G D K Y VFTT L GSA+C+FS+ED++
Sbjct: 264 LNCSVGGDIPFYFNEIQSTSPIVEGTYNGKDAKLIYSVFTTPHNSLSGSAVCAFSLEDVQ 323
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
RAF G FK Q S WLP+++S+VPEPRPGQCVND+ TLPD LNFI HPLMD+AV
Sbjct: 324 RAFEGNFKGQDDINSNWLPIVNSKVPEPRPGQCVNDSRTLPDVTLNFITEHPLMDQAVPS 383
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ FT++ VD V G +Y V F T R +
Sbjct: 384 YFGRPILVHTGFQYRFTYIAVDPQVETVNG--KKYDVLFIGTDVGRVL 429
>gi|427792355|gb|JAA61629.1| Putative semaphorin, partial [Rhipicephalus pulchellus]
Length = 741
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 146/228 (64%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S YV+FFFRE+AVEYINCGK+V+SRVARVC RD GG + Q W ++LKAR
Sbjct: 241 PNFVSSIHYEDYVYFFFRESAVEYINCGKTVYSRVARVCTRDKGGPHKFQQRWTSFLKAR 300
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+ PFYFNEIQ + G + K Y VFTT + GSA+C+F +EDI+
Sbjct: 301 LNCSVGGDIPFYFNEIQSTSPIVDGIYNGKEAKLIYSVFTTPHNSISGSAVCAFRVEDIQ 360
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
R F G FK Q S WLP+++S+VPEPRPGQCVND+ TLPD LNFI HPLMD+AV
Sbjct: 361 RVFEGSFKGQDDINSNWLPIVNSKVPEPRPGQCVNDSRTLPDVTLNFITEHPLMDQAVPS 420
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ FT++ VD V G +Y V F T T R +
Sbjct: 421 HFGRPILVHTGFQYRFTYIAVDPQVETVSG--KKYDVLFIGTDTGRVL 466
>gi|345482246|ref|XP_001607258.2| PREDICTED: semaphorin-1A-like [Nasonia vitripennis]
Length = 953
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/269 (47%), Positives = 163/269 (60%), Gaps = 14/269 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G YV+FF+RETAVEY+NCGK+V+SRVARVCK D GG + W ++LKAR
Sbjct: 188 PNFVSSFTYGDYVYFFYRETAVEYMNCGKAVYSRVARVCKHDKGGPHAFGDRWTSFLKAR 247
Query: 96 LNCSIPGEFPFYFNEIQDIYKV------PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG++PFYFNEIQ V YGVFTT + GSA+C+FS+ D+
Sbjct: 248 LNCSVPGDYPFYFNEIQSTSDVTEGVYNESHAQLIYGVFTTPVNSIGGSAVCAFSMSDVL 307
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+ F G FKEQ T S WL VL+ +VPEPRPG CVND+ TLPD +NF++SHPLMD+AV
Sbjct: 308 QVFQGAFKEQETINSNWLRVLTEKVPEPRPGACVNDSRTLPDITVNFVKSHPLMDDAVQT 367
Query: 210 RDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVS- 266
PV + + FT + VD + G Y V + T R V + VS
Sbjct: 368 FFGMPVVTKVTYNYRFTKVAVDPQVKALDGKL--YDVLYIGTDDGR-VMKALNTRSPVSR 424
Query: 267 NTSDSICESSVGRLK--QTVTWGQSVHLS 293
N S+ + S V LK Q V Q VHL+
Sbjct: 425 NDSNQVIVSDVQVLKYGQAVKDLQVVHLA 453
>gi|307200628|gb|EFN80745.1| Semaphorin-1A [Harpegnathos saltator]
Length = 803
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 158/263 (60%), Gaps = 14/263 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + S W ++LKAR
Sbjct: 57 PNFVSSFAYQDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 116
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G+ + YGVFTT + GSAIC+FS+ +I
Sbjct: 117 LNCSVPGEYPFYFNEIQSTSDVTDGRYAGESARLVYGVFTTPVNSIGGSAICAFSMNNIL 176
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL RVPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 177 EVFQGAFKEQETINSNWLRVLPERVPEPRPGACVNDSRTLPDITVNFVKAHPLMDDAVQS 236
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSN 267
PV + + FT + VD + G T Y + + T R + + N
Sbjct: 237 YFALPVITKISFNYRFTKVAVDPQVKALDGKT--YDILYIGTDDGRVLKALNTRAPETRN 294
Query: 268 TSDSICESSVGRLKQTVTWGQSV 290
I S V Q + +GQ+V
Sbjct: 295 NVGQIIVSDV----QVLKFGQAV 313
>gi|322782994|gb|EFZ10712.1| hypothetical protein SINV_80445 [Solenopsis invicta]
Length = 776
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 137/202 (67%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGKSV+SRV RVC+ D GG + S W ++LKAR
Sbjct: 44 PNFVSSFAYQDYVFFFYRETAVEYMNCGKSVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 103
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G + YGVFTT + GSAIC+FS++ I
Sbjct: 104 LNCSVPGEYPFYFNEIQSTSDVTDGRYAGKSARLVYGVFTTPVNSIGGSAICAFSMDSIL 163
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 164 EVFQGAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDITVNFVKAHPLMDDAVQS 223
Query: 210 RDNKPVFYRR--DLLFTHLVVD 229
+ PV + + FT + VD
Sbjct: 224 YFSLPVITKTSFNYRFTKVAVD 245
>gi|340710050|ref|XP_003393611.1| PREDICTED: semaphorin-1A-like [Bombus terrestris]
Length = 953
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 159/263 (60%), Gaps = 14/263 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + S W ++LKAR
Sbjct: 205 PNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 264
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G+ + YGVFTT + GSA+C+FS++++
Sbjct: 265 LNCSVPGEYPFYFNEIQSTSDVTEGVYAGERARLVYGVFTTPVNSIGGSAVCAFSMKNVL 324
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 325 EVFQGAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDMTVNFVKAHPLMDDAVQS 384
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSN 267
+ PV + + FT + VD + G Y + + T R + D N
Sbjct: 385 FFSLPVITKVSFNYRFTKVAVDPQVKALDGKA--YDILYVGTDDGRVLKALNTRAPDSLN 442
Query: 268 TSDSICESSVGRLKQTVTWGQSV 290
+ S V Q + +GQ++
Sbjct: 443 NVSQVIVSDV----QVLKYGQAI 461
>gi|8134678|sp|Q26473.1|SEM1A_SCHAM RecName: Full=Semaphorin-1A; AltName: Full=Fasciclin IV; AltName:
Full=Fasciclin-4; AltName: Full=Semaphorin-I; Short=Sema
I; Flags: Precursor
gi|160845|gb|AAA29808.1| fasciclin IV [Schistocerca americana]
Length = 730
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 150/243 (61%), Gaps = 6/243 (2%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV + + ++FFFFRETAVEYINCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 206 PNFVNTMEYNDFIFFFFRETAVEYINCGKAIYSRVARVCKHDKGGPHQFGDRWTSFLKSR 265
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG++PFYFNEIQ + G K YGVFTT + GSA+C+FS++ I
Sbjct: 266 LNCSVPGDYPFYFNEIQSTSDIIEGNYGGQVEKLIYGVFTTPVNSIGGSAVCAFSMKSIL 325
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+F G FKEQ T S WL V S +VPEPRPGQCVND+ TLPD +NF++SH LMDEAV
Sbjct: 326 ESFDGPFKEQETMNSNWLAVPSLKVPEPRPGQCVNDSRTLPDVSVNFVKSHTLMDEAVPA 385
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
+P+ R L + + V Q Y V F T + + D S+T
Sbjct: 386 FFTRPILIRISLQYRFTKIAVDQQVRTPDGKAYDVLFIGTDDGKVIKALNSASFDSSDTV 445
Query: 270 DSI 272
DS+
Sbjct: 446 DSV 448
>gi|332016562|gb|EGI57443.1| Semaphorin-1A [Acromyrmex echinatior]
Length = 772
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 138/202 (68%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV ++ YVFFF+RETAVEY+NCGKSV+SRV RVC+ D GG + S W ++LKAR
Sbjct: 41 PNFVSTFAYQDYVFFFYRETAVEYMNCGKSVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 100
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G + YGVFTT + GSAIC+FS+++I
Sbjct: 101 LNCSVPGEYPFYFNEIQSTSDVTDGRYAGKSARLVYGVFTTPVNSIGGSAICAFSMDNIL 160
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 161 EVFQGAFKEQETINSNWLRVLQEKVPEPRPGACVNDSRTLPDITVNFVKAHPLMDDAVQS 220
Query: 210 RDNKPVFYRR--DLLFTHLVVD 229
+ PV + + FT + VD
Sbjct: 221 YFSLPVITKTSFNYRFTKVAVD 242
>gi|350413728|ref|XP_003490090.1| PREDICTED: semaphorin-1A-like [Bombus impatiens]
Length = 954
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 159/263 (60%), Gaps = 14/263 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + S W ++LKAR
Sbjct: 205 PNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 264
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G+ + YGVFTT + GSA+C+FS++++
Sbjct: 265 LNCSVPGEYPFYFNEIQSTSDVTEGVYAGERARLVYGVFTTPVNSIGGSAVCAFSMKNVL 324
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 325 EVFQGAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDVTVNFVKAHPLMDDAVQS 384
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSN 267
+ PV + + FT + VD + G Y + + T R + D N
Sbjct: 385 FFSLPVITKVSFNYRFTKVAVDPQVKALDGKA--YDILYVGTDDGRVLKALNTRAPDSLN 442
Query: 268 TSDSICESSVGRLKQTVTWGQSV 290
+ S V Q + +GQ++
Sbjct: 443 NVSQVIVSDV----QVLKYGQAI 461
>gi|345497770|ref|XP_001599680.2| PREDICTED: semaphorin-1A-like [Nasonia vitripennis]
Length = 769
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 207 PNFVSSMTQGDFVYFFFRETAVEYINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 266
Query: 96 LNCSIPGEFPFYFNEIQD----IYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ I V G + YG FTT + GSA+C+FS++DI
Sbjct: 267 LNCSVTGDFPFYFNEIQSTTELISGVYGGVSAQLIYGTFTTPVNSISGSAVCAFSLQDIA 326
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV SS+VP+PRPGQC ND+ TLPD LNFI+SH LMDE+V
Sbjct: 327 DTFEGNFKEQSALNSNWLPVQSSKVPDPRPGQCANDSRTLPDLTLNFIKSHSLMDESVRS 386
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 387 FFGQPIVIRTSFHYRFTQITVDPQVKTPGGKT--YDVLFIGTDNGKVI 432
>gi|380014169|ref|XP_003691112.1| PREDICTED: semaphorin-1A-like, partial [Apis florea]
Length = 775
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 161/264 (60%), Gaps = 16/264 (6%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + + W ++LKAR
Sbjct: 36 PNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFNDRWTSFLKAR 95
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G+ + YGVFTT + GSA+C+FS++++
Sbjct: 96 LNCSVPGEYPFYFNEIQSTSDVTEGVYAGERARLVYGVFTTPVNSIGGSAVCAFSMKNVL 155
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 156 EVFQGAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDVTVNFVKAHPLMDDAVQS 215
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV-FVKVRLLQDVS 266
+ PV + + FT + VD + G Y + + T R + + R +S
Sbjct: 216 FFSLPVITKVSFNYRFTKVAVDPQVKALDGKA--YDILYVGTDDGRVLKALNTRAPDSLS 273
Query: 267 NTSDSICESSVGRLKQTVTWGQSV 290
N S I Q + +GQ++
Sbjct: 274 NVSQVIVSDV-----QVLKYGQAI 292
>gi|328778122|ref|XP_003249452.1| PREDICTED: semaphorin-1A-like [Apis mellifera]
Length = 952
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 159/263 (60%), Gaps = 14/263 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + + W ++LKAR
Sbjct: 205 PNFVSSFAYEDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFNDRWTSFLKAR 264
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G+ + YGVFTT + GSA+C+FS++++
Sbjct: 265 LNCSVPGEYPFYFNEIQSTSDVTEGVYAGERARLVYGVFTTPVNSIGGSAVCAFSMKNVL 324
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 325 EVFQGAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDVTVNFVKAHPLMDDAVQS 384
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSN 267
+ PV + + FT + VD Q + + I+Y + R +SN
Sbjct: 385 FFSLPVITKVSFNYRFTKVAVD-PQVKALDGKAYDILYVGTDDGRVLKALNTRAPDSLSN 443
Query: 268 TSDSICESSVGRLKQTVTWGQSV 290
S I Q + +GQ++
Sbjct: 444 VSQVIVSDV-----QVLKYGQAI 461
>gi|321458803|gb|EFX69865.1| hypothetical protein DAPPUDRAFT_328717 [Daphnia pulex]
Length = 666
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 140/208 (67%), Gaps = 20/208 (9%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G YV+FF RETAVEYINCGK+V+SRVARVCK D GG + S W ++LK+R
Sbjct: 174 PNFVSSVADGDYVYFFLRETAVEYINCGKTVYSRVARVCKNDKGGPHRWSNRWTSFLKSR 233
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG+FPFYF+EIQ V G T+ YGVFTT + GSAIC+F ++D+
Sbjct: 234 LNCSLPGDFPFYFDEIQSTSDVVEGTYGHRTERLIYGVFTTPENSIYGSAICAFRLQDVM 293
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+F G FKEQ + + WLPV + VPEPRPGQCVND+ TLP+ LNFI+SH LMDE+V
Sbjct: 294 DSFDGAFKEQNSMNANWLPVSGNDVPEPRPGQCVNDSRTLPEVTLNFIKSHSLMDESV-- 351
Query: 210 RDNKPVFYRRDLL--------FTHLVVD 229
P FY L+ FT LVVD
Sbjct: 352 ----PAFYGLPLVTHTSLKYKFTKLVVD 375
>gi|195118360|ref|XP_002003705.1| GI21441 [Drosophila mojavensis]
gi|193914280|gb|EDW13147.1| GI21441 [Drosophila mojavensis]
Length = 865
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 216 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 275
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T T + GSA+C+F+++DI
Sbjct: 276 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPTNSIPGSAVCAFALQDIA 335
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VPEPRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 336 DTFEGQFKEQSGINSNWLPVNNAKVPEPRPGACHNDSRTLPDPTLNFIKTHSLMDENVPA 395
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 396 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 435
>gi|195033209|ref|XP_001988640.1| GH11272 [Drosophila grimshawi]
gi|193904640|gb|EDW03507.1| GH11272 [Drosophila grimshawi]
Length = 774
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 156 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 215
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T T + GSA+C+F+++DI
Sbjct: 216 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPTNSIPGSAVCAFALQDIA 275
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VPEPRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 276 DTFEGQFKEQSGINSNWLPVNNAKVPEPRPGACHNDSRTLPDPTLNFIKTHSLMDENVPA 335
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 336 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 375
>gi|195385825|ref|XP_002051605.1| GJ11247 [Drosophila virilis]
gi|194148062|gb|EDW63760.1| GJ11247 [Drosophila virilis]
Length = 868
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 216 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 275
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T T + GSA+C+F+++DI
Sbjct: 276 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPTNSIPGSAVCAFALQDIA 335
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VPEPRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 336 DTFEGQFKEQSGINSNWLPVNNAKVPEPRPGACHNDSRTLPDPTLNFIKTHSLMDENVPA 395
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 396 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 435
>gi|91087593|ref|XP_972078.1| PREDICTED: similar to Sema-1a CG18405-PA [Tribolium castaneum]
Length = 1326
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 147/228 (64%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
PDFV S +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 726 PDFVSSMTQKDFVYFFFRETAVEYINCGKAVYSRVARVCKNDRGGPHRFRNRWTSFLKSR 785
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ GEFPFYFNEIQ ++ GD YG FTT + GSA+C+FS++DI
Sbjct: 786 LNCSVTGEFPFYFNEIQSTTELIEGQYGDVYAQLIYGTFTTPPNSISGSAVCAFSLQDIT 845
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV SS+VP+PRPGQC ND+ TLPD LNFI++H LMDE+V
Sbjct: 846 DTFEGNFKEQSAINSNWLPVQSSKVPDPRPGQCHNDSRTLPDLTLNFIKTHSLMDESVPS 905
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD Q +V G + Y V F T + +
Sbjct: 906 FFGQPIVIRTIFHYRFTQIAVD-PQVKVPGGKT-YDVLFIGTDNGKII 951
>gi|270011103|gb|EFA07551.1| semaphorin-1a-like protein [Tribolium castaneum]
Length = 765
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/228 (51%), Positives = 147/228 (64%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
PDFV S +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 203 PDFVSSMTQKDFVYFFFRETAVEYINCGKAVYSRVARVCKNDRGGPHRFRNRWTSFLKSR 262
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ GEFPFYFNEIQ ++ GD YG FTT + GSA+C+FS++DI
Sbjct: 263 LNCSVTGEFPFYFNEIQSTTELIEGQYGDVYAQLIYGTFTTPPNSISGSAVCAFSLQDIT 322
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV SS+VP+PRPGQC ND+ TLPD LNFI++H LMDE+V
Sbjct: 323 DTFEGNFKEQSAINSNWLPVQSSKVPDPRPGQCHNDSRTLPDLTLNFIKTHSLMDESVPS 382
Query: 210 RDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD Q +V G + Y V F T + +
Sbjct: 383 FFGQPIVIRTIFHYRFTQIAVD-PQVKVPGGKT-YDVLFIGTDNGKII 428
>gi|195156593|ref|XP_002019184.1| GL25556 [Drosophila persimilis]
gi|194115337|gb|EDW37380.1| GL25556 [Drosophila persimilis]
Length = 905
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 252 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 311
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G+ YGVF T + GSA+C+F+++DI
Sbjct: 312 LNCSIPGDYPFYFNEIQSASNLVAGEYGSMSSKLIYGVFNTPANSIPGSAVCAFALQDIA 371
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VPEPRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 372 DTFEGQFKEQSGIGSNWLPVNNAKVPEPRPGSCHNDSRTLPDPTLNFIKTHSLMDENVPA 431
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 432 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 471
>gi|321476899|gb|EFX87858.1| hypothetical protein DAPPUDRAFT_221078 [Daphnia pulex]
Length = 892
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 142/211 (67%), Gaps = 10/211 (4%)
Query: 29 RYD--NCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD N P+FV S+ G YV+F FRETAVEY+NCGK+V+SR+ARVCK D GG +
Sbjct: 133 QYDATNLNAPNFVSSFAHGDYVYFTFRETAVEYMNCGKTVYSRIARVCKSDRGGPHKFRY 192
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTK---FYGVFTTSTTGLMGSAI 140
W ++LK+RLNCS+ G++PFYFNEIQ Y+ + + Y FTT + L GSA+
Sbjct: 193 RWTSFLKSRLNCSVSGDYPFYFNEIQSTAGPYESRHEGKRVDIIYATFTTPSNALSGSAV 252
Query: 141 CSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSH 200
C+F + D+E+ F G FKEQA WLPV + +VPEPRPGQCVND++TLPD LNFI+SH
Sbjct: 253 CAFRLHDVEKVFDGAFKEQAALNYNWLPVPAHKVPEPRPGQCVNDSQTLPDVTLNFIKSH 312
Query: 201 PLMDEAVAHRDNKPVFYRRDL--LFTHLVVD 229
LMDE+V N+P+ R FT + VD
Sbjct: 313 SLMDESVPSMLNEPLIIRTGFHHRFTKIEVD 343
>gi|157130662|ref|XP_001661952.1| semaphorin [Aedes aegypti]
gi|108881913|gb|EAT46138.1| AAEL002653-PA, partial [Aedes aegypti]
Length = 677
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 142/222 (63%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FVGS+ G +V+FFFRETAVE+INCGK+V SRVARVCK D GG + W TYLK+R
Sbjct: 37 PNFVGSFTQGDFVYFFFRETAVEFINCGKAVVSRVARVCKWDKGGPHRYKNRWTTYLKSR 96
Query: 96 LNCSIPGEFPFYFNEIQDIYKV------PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG+FPFYF+EIQ + G+ Y VF+TST + GSAIC+FS++DI
Sbjct: 97 LNCSMPGDFPFYFDEIQSTSSLVEGRYGNGNSKLIYSVFSTSTNAIAGSAICAFSLQDIA 156
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S+VP+PRPG C ND+ TLPD LNF ++H LMDE V
Sbjct: 157 DTFEGNFKEQSGLNSNWLPVNPSKVPDPRPGSCHNDSRTLPDLTLNFKKTHSLMDENVPT 216
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
P+ R + FT + VD G T Y V F T
Sbjct: 217 FFGSPILTRVSTVYRFTAIAVDPQIKTPGGKT--YDVIFVGT 256
>gi|391335243|ref|XP_003742005.1| PREDICTED: semaphorin-1A-like [Metaseiulus occidentalis]
Length = 737
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 156/247 (63%), Gaps = 17/247 (6%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S IG +V+FFFRE+AVE+INCGK+++SRVARVC D GG + + + ++LKAR
Sbjct: 217 PQFVSSMHIGSHVYFFFRESAVEFINCGKAIYSRVARVCTNDQGGPHKFKERFTSFLKAR 276
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG+ PFYFNE+Q + G+ + Y V TT T + GSA+C+F ++DI+
Sbjct: 277 LNCSIPGDMPFYFNELQSTSPIVDGSYNGERARLIYSVLTTGTNSMSGSAVCAFRVDDID 336
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
R F G FK Q S WLPV++S+VPEPRPGQCVN++++LPD LNFI +HPLMD+AV
Sbjct: 337 RVFHGPFKGQEEKNSNWLPVINSKVPEPRPGQCVNNSKSLPDVTLNFITNHPLMDQAVPS 396
Query: 210 RDNKPVFYRR--DLLFTHLVVDVV-------QYEVF--GTTSEYIVYFAATTTLRTVFVK 258
+P+ + +T++ VD Y+V GT ++V +LR
Sbjct: 397 YFGRPIVVHTGFNYRYTYIAVDAQVEGVNGKMYDVLFIGTDHGHVVKVVNVASLRKEHEG 456
Query: 259 VRLLQDV 265
+++DV
Sbjct: 457 PIVVEDV 463
>gi|198472037|ref|XP_001355818.2| Sema-1a [Drosophila pseudoobscura pseudoobscura]
gi|198139577|gb|EAL32877.2| Sema-1a [Drosophila pseudoobscura pseudoobscura]
Length = 838
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 144/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 185 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 244
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G+ YGVF T + GSA+C+F+++DI
Sbjct: 245 LNCSIPGDYPFYFNEIQSASNLVAGEYGSMSSKLIYGVFNTPANSIPGSAVCAFALQDIA 304
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VPEPRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 305 DTFEGQFKEQSGIGSNWLPVNNAKVPEPRPGSCHNDSRTLPDPTLNFIKTHSLMDENVPA 364
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 365 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 404
>gi|241119242|ref|XP_002402513.1| Semaphorin-2A, putative [Ixodes scapularis]
gi|215493310|gb|EEC02951.1| Semaphorin-2A, putative [Ixodes scapularis]
Length = 679
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/159 (66%), Positives = 129/159 (81%), Gaps = 3/159 (1%)
Query: 19 KQIALVMCAHRYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKR 76
+Q M +YD+ +P+FVGS+DIG +VFFFFRE+AVEYINCGK ++SRVARVCK+
Sbjct: 179 EQSEFFMRTLKYDSMWLDKPNFVGSFDIGDHVFFFFRESAVEYINCGKVIYSRVARVCKK 238
Query: 77 DTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTST-TGL 135
DTGGKNIL+ NWAT+LKARLNCS+PGE+PFYFNEIQ +YK P DD+ Y VFTTS G
Sbjct: 239 DTGGKNILTHNWATFLKARLNCSLPGEYPFYFNEIQSVYKFPDDDSYVYAVFTTSLHGGP 298
Query: 136 MGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRV 174
GSA+CSF + DI+ AF GKFKEQ TS+SAWLPVL+S+V
Sbjct: 299 HGSAVCSFRLSDIQGAFGGKFKEQKTSSSAWLPVLTSQV 337
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 16/123 (13%)
Query: 260 RLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLP--------ASMANQPMS--- 308
R LQDVSNT+ +CE S+ R + WG+SVHLSC P ++ P +
Sbjct: 500 RYLQDVSNTTPGLCEGSIRRRQLRAHWGESVHLSCQGHHPELLEPPHAGALRGNPGATGA 559
Query: 309 ---WYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN-TVLCTHNLT 364
WYH + + R + + DKF+ + GLV++ + E D G+YD L + LC++N+T
Sbjct: 560 TPVWYH-QQGRERRPVPSKRDKFVHSTGHGLVVLGLTERDTGRYDLHLDSLGTLCSYNVT 618
Query: 365 VDA 367
VDA
Sbjct: 619 VDA 621
>gi|195443440|ref|XP_002069425.1| GK18750 [Drosophila willistoni]
gi|194165510|gb|EDW80411.1| GK18750 [Drosophila willistoni]
Length = 851
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 145/222 (65%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 201 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 260
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T T + GSA+C+F+++DI
Sbjct: 261 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPTNSIPGSAVCAFALQDIA 320
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ +S WLPV +++VP+PRPG C ND+ TLPD LNFI++H LMDE V
Sbjct: 321 DTFEGQFKEQSGISSNWLPVNNAKVPDPRPGACHNDSRTLPDPTLNFIKTHSLMDENVPA 380
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 381 FFGQPILVRTSTIYRFTQIAVDSQIKTPGGKT--YDVIFVGT 420
>gi|357603515|gb|EHJ63811.1| semaphorin-1a-like protein [Danaus plexippus]
Length = 659
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 136/202 (67%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
PDFV S G +V+FFFRETAVEYINCGK+VFSRVARVC+ D GG + Q W ++LK+R
Sbjct: 111 PDFVNSLVHGNFVYFFFRETAVEYINCGKAVFSRVARVCRDDRGGPHRFKQRWTSFLKSR 170
Query: 96 LNCSIPGEFPFYFNEIQD----IYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ I V G + YG FTT + GSA+C+FS++DI
Sbjct: 171 LNCSVAGDFPFYFNEIQSTTELIEGVYGGLNAQLIYGTFTTPPNSISGSAVCAFSMQDIA 230
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VPEPRPG C ND+ LPD LNFI++H LMDE+V
Sbjct: 231 DTFEGTFKEQSAINSNWLPVNSAKVPEPRPGTCHNDSRQLPDQTLNFIKTHALMDESVPA 290
Query: 210 RDNKPVFYRRDL--LFTHLVVD 229
+P+ R FT + VD
Sbjct: 291 FFGEPIVIRTSFHYRFTQIAVD 312
>gi|307178630|gb|EFN67280.1| Semaphorin-1A [Camponotus floridanus]
Length = 772
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 137/202 (67%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ YVFFF+RETAVEY+NCGK+V+SRV RVC+ D GG + S W ++LKAR
Sbjct: 41 PNFVSSFAYQDYVFFFYRETAVEYMNCGKAVYSRVGRVCQHDKGGPHAFSDRWTSFLKAR 100
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYFNEIQ V G + Y VFTT + GSA+C+FS+++I
Sbjct: 101 LNCSVPGEYPFYFNEIQSTSDVTEGRYAGKSARLVYAVFTTPVNSIGGSAVCAFSMDNIL 160
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F FKEQ T S WL VL +VPEPRPG CVND+ TLPD +NF+++HPLMD+AV
Sbjct: 161 EVFQSAFKEQETINSNWLRVLPEKVPEPRPGACVNDSRTLPDITVNFVKAHPLMDDAVQS 220
Query: 210 RDNKPVFYRR--DLLFTHLVVD 229
+ PV + + FT +VVD
Sbjct: 221 YFSLPVITKTSFNYRFTKVVVD 242
>gi|322791473|gb|EFZ15870.1| hypothetical protein SINV_05024 [Solenopsis invicta]
Length = 630
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 143/228 (62%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 111 PNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 170
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G + YG FTT + GSA+C+FS++DI
Sbjct: 171 LNCSVTGDFPFYFNEIQSTTELISGQYGGTSAQLIYGTFTTPVNSISGSAVCAFSLQDIA 230
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV ++VP+PRPGQC ND+ TLPD LNFI +H LMDE+V
Sbjct: 231 DTFAGNFKEQSALNSNWLPVQDTKVPDPRPGQCTNDSRTLPDLTLNFINTHSLMDESVPS 290
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 291 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 336
>gi|332031158|gb|EGI70735.1| Semaphorin-1A [Acromyrmex echinatior]
Length = 701
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 143/228 (62%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 143 PNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARVCKYDRGGPHRFRNRWTSFLKSR 202
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G + YG FTT + GSA+C+FS++DI
Sbjct: 203 LNCSVTGDFPFYFNEIQSTTELISGQYGGTSAQLIYGTFTTPVNSISGSAVCAFSLQDIA 262
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV ++VP+PRPGQC ND+ TLPD LNFI +H LMDE+V
Sbjct: 263 DTFAGNFKEQSAMNSNWLPVQDTKVPDPRPGQCTNDSRTLPDLTLNFINTHSLMDESVPS 322
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 323 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 368
>gi|158293410|ref|XP_314756.4| AGAP008656-PA [Anopheles gambiae str. PEST]
gi|157016692|gb|EAA10136.5| AGAP008656-PA [Anopheles gambiae str. PEST]
Length = 812
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/222 (50%), Positives = 141/222 (63%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FVGS+ G +V+FFFRETAVE+INCGK++FSRVARVCK D GG N L W +YLK+R
Sbjct: 172 PNFVGSFTQGDFVYFFFRETAVEFINCGKAIFSRVARVCKWDKGGPNRLKNRWTSYLKSR 231
Query: 96 LNCSIPGEFPFYFNEIQDIYKV------PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG+FPFYF+EIQ + + YGVF+T+ + GSAIC+FS+++I
Sbjct: 232 LNCSMPGDFPFYFDEIQSTSNLVEGRYGHANSKLIYGVFSTAPNAIAGSAICAFSLQEIS 291
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV VP+PRPG C ND+ TLPD LNF ++H LMDE V
Sbjct: 292 DTFEGNFKEQSGLNSNWLPVNPLNVPDPRPGSCHNDSRTLPDLTLNFKKTHSLMDETVPA 351
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
P+ R + FT + VD G T Y V F T
Sbjct: 352 FFGSPILTRVSTMYRFTAIAVDPQIKTPGGKT--YDVIFVGT 391
>gi|307198545|gb|EFN79430.1| Semaphorin-1A [Harpegnathos saltator]
Length = 739
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 134/202 (66%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W +YLK+R
Sbjct: 181 PNFVSSMSQGDFVYFFFRETAVEYINCGKAVYSRVARVCKYDRGGPHRFRNRWTSYLKSR 240
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G + YG FTT + GSA+C+FS++DI
Sbjct: 241 LNCSVTGDFPFYFNEIQSTTELISGQYGGTSAQLIYGTFTTPVNSISGSAVCAFSLQDIA 300
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ S WLPV ++VP+PRPGQC ND+ TLPD LNFI +H LMDE+V
Sbjct: 301 DTFNGNFKEQTALNSNWLPVQDTKVPDPRPGQCTNDSRTLPDLTLNFINTHSLMDESVPS 360
Query: 210 RDNKPVFYRRDL--LFTHLVVD 229
+P+ R FT + VD
Sbjct: 361 FFGQPIVIRTSFHYRFTQIAVD 382
>gi|442626901|ref|NP_001260265.1| Sema-1a, isoform G [Drosophila melanogaster]
gi|440213576|gb|AGB92801.1| Sema-1a, isoform G [Drosophila melanogaster]
Length = 1131
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|328792356|ref|XP_394163.3| PREDICTED: semaphorin-1A [Apis mellifera]
Length = 771
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 213 PNFVNSMAQGDFVYFFFRETAVEYINCGKTVYSRVARVCKYDRGGPHRYRNRWTSFLKSR 272
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G+ + YG FTT + GSA+C+FS++DI
Sbjct: 273 LNCSVTGDFPFYFNEIQSTTELISGQYGNKSAQLIYGTFTTPVNSISGSAVCAFSLQDIT 332
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VP+PRPGQCVND+ +LPD LNFI +H LMDE V
Sbjct: 333 DTFKGNFKEQSAINSNWLPVQSTKVPDPRPGQCVNDSRSLPDLTLNFIHTHSLMDELVPS 392
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 393 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 438
>gi|380014235|ref|XP_003691145.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-1A-like [Apis florea]
Length = 734
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 176 PNFVNSMAQGDFVYFFFRETAVEYINCGKTVYSRVARVCKYDRGGPHRYRNRWTSFLKSR 235
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G+ + YG FTT + GSA+C+FS++DI
Sbjct: 236 LNCSVTGDFPFYFNEIQSTTELISGQYGNKSAQLIYGTFTTPVNSISGSAVCAFSLQDIT 295
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VP+PRPGQCVND+ +LPD LNFI +H LMDE V
Sbjct: 296 DTFKGNFKEQSAINSNWLPVQSTKVPDPRPGQCVNDSRSLPDLTLNFIHTHSLMDELVPS 355
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 356 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 401
>gi|237681147|ref|NP_001153720.1| semaphorin-1a [Tribolium castaneum]
gi|270015157|gb|EFA11605.1| semaphorin-1a-like protein [Tribolium castaneum]
Length = 724
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 134/203 (66%), Gaps = 9/203 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G Y+FFF+RETAVEY+NCGK ++SRVARVCK D GG + W ++LKAR
Sbjct: 216 PNFVNSVAYGDYIFFFYRETAVEYMNCGKVIYSRVARVCKDDKGGPHQSRDRWTSFLKAR 275
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTK--FYGVFTTSTTGLMGSAICSFSIEDI 148
LNCSIPGE+PFYF+EIQ + DD+K YG+ TT + GSAIC++ + DI
Sbjct: 276 LNCSIPGEYPFYFDEIQSTSDIVEGRYNSDDSKKIIYGILTTPVNAIGGSAICAYQMADI 335
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
R F G FK Q T S WLPV + VPEPRPGQCV D+ LPD +NFI++H LM++AV
Sbjct: 336 LRVFEGSFKHQETINSNWLPVPQNLVPEPRPGQCVRDSRILPDKNVNFIKTHSLMEDAVP 395
Query: 209 HRDNKPVFYRRDLL--FTHLVVD 229
KPV R L FT + VD
Sbjct: 396 ALFGKPVLVRVSLQYRFTAITVD 418
>gi|350419131|ref|XP_003492080.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-1A-like [Bombus
impatiens]
Length = 788
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 213 PNFVSSMAQGDFVYFFFRETAVEYINCGKTVYSRVARVCKYDRGGPHRYRNRWTSFLKSR 272
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G+ + YG FTT + GSA+C+FS++D+
Sbjct: 273 LNCSVTGDFPFYFNEIQSTTELISGQYGNKSAQLIYGTFTTPVNSISGSAVCAFSLQDVT 332
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VP+PRPGQCVND+ +LPD LNFI +H LMDE V
Sbjct: 333 DTFKGNFKEQSAINSNWLPVQSTKVPDPRPGQCVNDSRSLPDLTLNFINTHSLMDELVPS 392
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 393 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 438
>gi|320544704|ref|NP_001188731.1| Sema-1a, isoform D [Drosophila melanogaster]
gi|320544706|ref|NP_609243.3| Sema-1a, isoform E [Drosophila melanogaster]
gi|318068356|gb|ADV36981.1| Sema-1a, isoform D [Drosophila melanogaster]
gi|318068357|gb|AAN10677.3| Sema-1a, isoform E [Drosophila melanogaster]
Length = 905
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|28574079|ref|NP_723407.2| Sema-1a, isoform A [Drosophila melanogaster]
gi|28380314|gb|AAF52696.2| Sema-1a, isoform A [Drosophila melanogaster]
Length = 899
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|195577665|ref|XP_002078689.1| GD23556 [Drosophila simulans]
gi|194190698|gb|EDX04274.1| GD23556 [Drosophila simulans]
Length = 897
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|195339291|ref|XP_002036253.1| GM17077 [Drosophila sechellia]
gi|194130133|gb|EDW52176.1| GM17077 [Drosophila sechellia]
Length = 897
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|194858641|ref|XP_001969222.1| GG25296 [Drosophila erecta]
gi|190661089|gb|EDV58281.1| GG25296 [Drosophila erecta]
Length = 902
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 254 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 313
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 314 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 373
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 374 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 433
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 434 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 473
>gi|442626905|ref|NP_001260267.1| Sema-1a, isoform I [Drosophila melanogaster]
gi|440213578|gb|AGB92803.1| Sema-1a, isoform I [Drosophila melanogaster]
Length = 817
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|328707579|ref|XP_001944597.2| PREDICTED: semaphorin-1A-like [Acyrthosiphon pisum]
Length = 713
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 151/256 (58%), Gaps = 22/256 (8%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S + Y+FFFFRE AVEYINCGK+++SRVARVCK D GG + W ++LKAR
Sbjct: 211 PNFVSSLEYKDYIFFFFREIAVEYINCGKTIYSRVARVCKHDKGGPHSYRDRWTSFLKAR 270
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGD------DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PGE+PFYF+EIQD + D YGVF T + GSA+C F+I D+
Sbjct: 271 LNCSMPGEYPFYFDEIQDTSDILNTALTGIVDPIVYGVFNTPVNAISGSAVCMFNISDVI 330
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F+G FK+Q S WLPV ++PEPRPG CV+D+ TLPD +NFI+SH LMD AV
Sbjct: 331 ETFMGSFKDQEAMDSNWLPV--KKIPEPRPGTCVDDSRTLPDITVNFIKSHSLMDGAVPS 388
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYI-VYFAATTTLRTV------------F 256
+KP+F R L + L V ++ G +Y + F T R V F
Sbjct: 389 LFSKPIFTRISLQ-SRLTSIAVDNQISGLKGQYYDILFMGTDDGRLVKGALHTNNGLPEF 447
Query: 257 VKVRLLQDVSNTSDSI 272
V + + SN + S+
Sbjct: 448 VNIEEVNLTSNNTKSL 463
>gi|320544708|ref|NP_001188732.1| Sema-1a, isoform F [Drosophila melanogaster]
gi|318068358|gb|ADV36982.1| Sema-1a, isoform F [Drosophila melanogaster]
Length = 826
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|195473117|ref|XP_002088842.1| GE18787 [Drosophila yakuba]
gi|194174943|gb|EDW88554.1| GE18787 [Drosophila yakuba]
Length = 901
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 252 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 311
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 312 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 371
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 372 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 431
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 432 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 471
>gi|340709066|ref|XP_003393136.1| PREDICTED: semaphorin-1A-like [Bombus terrestris]
Length = 771
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 145/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEYINCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 213 PNFVSSMAQGDFVYFFFRETAVEYINCGKTVYSRVARVCKYDRGGPHRYRNRWTSFLKSR 272
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G+ + YG FTT + GSA+C+FS++D+
Sbjct: 273 LNCSVTGDFPFYFNEIQSTTELISGQYGNKSAQLIYGTFTTPVNSISGSAVCAFSLQDVT 332
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VP+PRPGQCVND+ +LPD LNFI +H LMDE V
Sbjct: 333 DTFKGNFKEQSAINSNWLPVQSTKVPDPRPGQCVNDSRSLPDLTLNFINTHSLMDELVPS 392
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 393 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 438
>gi|442626903|ref|NP_001260266.1| Sema-1a, isoform H [Drosophila melanogaster]
gi|440213577|gb|AGB92802.1| Sema-1a, isoform H [Drosophila melanogaster]
Length = 820
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 250 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 309
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 310 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 369
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 370 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 429
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 430 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 469
>gi|45645191|sp|Q24322.2|SEM1A_DROME RecName: Full=Semaphorin-1A; AltName: Full=Semaphorin-I; Short=Sema
I; Flags: Precursor
Length = 850
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 201 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 260
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 261 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 320
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 321 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 380
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 381 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 420
>gi|630871|pir||B49423 semaphorin I - fruit fly (Drosophila melanogaster) (fragment)
Length = 656
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 103 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 162
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 163 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 222
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 223 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 282
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 283 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 322
>gi|1197819|gb|AAA88789.1| semaphorin-I [Drosophila melanogaster]
Length = 771
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 201 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 260
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 261 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 320
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 321 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 380
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 381 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 420
>gi|383864859|ref|XP_003707895.1| PREDICTED: semaphorin-1A-like [Megachile rotundata]
Length = 771
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 144/228 (63%), Gaps = 10/228 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G +V+FFFRETAVEY+NCGK+V+SRVARVCK D GG + W ++LK+R
Sbjct: 213 PNFVSSMSQGDFVYFFFRETAVEYMNCGKTVYSRVARVCKYDRGGPHRYRNRWTSFLKSR 272
Query: 96 LNCSIPGEFPFYFNEIQDIYKVP----GDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G+FPFYFNEIQ ++ G+ + YG FTT + GSA+C+FS++DI
Sbjct: 273 LNCSVTGDFPFYFNEIQSTTELISGQYGNTSAQLIYGTFTTPVNSISGSAVCAFSLQDIT 332
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ+ S WLPV S++VP+PRPGQCVND+ LPD LNFI +H LMDE V
Sbjct: 333 DTFKGNFKEQSAINSNWLPVQSAKVPDPRPGQCVNDSHALPDLTLNFIHTHSLMDELVPS 392
Query: 210 RDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+P+ R FT + VD G T Y V F T + +
Sbjct: 393 FFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGKVI 438
>gi|302393611|gb|ADL32751.1| MIP14656p [Drosophila melanogaster]
Length = 546
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 111 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 170
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 171 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 230
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 231 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 290
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 291 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 330
>gi|2852642|gb|AAC19159.1| similar to semaphorin-I [Drosophila melanogaster]
Length = 770
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E +N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM+EAV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHG 406
Query: 213 KPVFYRRDL 221
+P+ + +L
Sbjct: 407 RPLLTKVNL 415
>gi|19922466|ref|NP_611244.1| Sema-1b, isoform A [Drosophila melanogaster]
gi|45552709|ref|NP_995879.1| Sema-1b, isoform B [Drosophila melanogaster]
gi|281363577|ref|NP_001163178.1| Sema-1b, isoform C [Drosophila melanogaster]
gi|5901806|gb|AAD55411.1|AF181625_1 semaphorin-like [Drosophila melanogaster]
gi|7302738|gb|AAF57816.1| Sema-1b, isoform A [Drosophila melanogaster]
gi|45445491|gb|AAS64817.1| Sema-1b, isoform B [Drosophila melanogaster]
gi|220943646|gb|ACL84366.1| Sema-1b-PA [synthetic construct]
gi|229462534|gb|ACQ66050.1| MIP07328p [Drosophila melanogaster]
gi|272432525|gb|ACZ94450.1| Sema-1b, isoform C [Drosophila melanogaster]
Length = 770
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E +N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM+EAV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHG 406
Query: 213 KPVFYRRDL 221
+P+ + +L
Sbjct: 407 RPLLTKVNL 415
>gi|195584315|ref|XP_002081959.1| GD25452 [Drosophila simulans]
gi|194193968|gb|EDX07544.1| GD25452 [Drosophila simulans]
Length = 579
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E +N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM+EAV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHG 406
Query: 213 KPVFYRRDL 221
+P+ + +L
Sbjct: 407 RPLLTKVNL 415
>gi|195335324|ref|XP_002034324.1| GM19960 [Drosophila sechellia]
gi|194126294|gb|EDW48337.1| GM19960 [Drosophila sechellia]
Length = 770
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E +N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM+EAV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHG 406
Query: 213 KPVFYRRDL 221
+P+ + +L
Sbjct: 407 RPLLTKVNL 415
>gi|157133916|ref|XP_001663071.1| semaphorin [Aedes aegypti]
gi|108881440|gb|EAT45665.1| AAEL003063-PA [Aedes aegypti]
Length = 776
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 150/234 (64%), Gaps = 11/234 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP FV + + YV FFFRE AVEY+NCGK+++SRV+RVCK D GG + L+ W ++LKA
Sbjct: 205 QPAFVSAVEHNGYVLFFFREVAVEYMNCGKAIYSRVSRVCKNDKGGPHPLNDRWTSFLKA 264
Query: 95 RLNCSIPGEFPFYFNEIQDIYK----VPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDI 148
RLNCSIPGE+PFYF+EIQ K + G +T Y + TT + GSA+C+F+I+DI
Sbjct: 265 RLNCSIPGEYPFYFDEIQSTTKTINGIYGSETNQIIYAIMTTPENAIGGSAVCAFAIQDI 324
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
AF G FK Q + S WL V ++VPEPRPG+CV+D+ TLP + +NF++ H LMD +V
Sbjct: 325 LDAFEGPFKWQQSINSNWLQVPQNQVPEPRPGKCVDDSRTLPKASVNFVKMHTLMDSSVP 384
Query: 209 HRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTV-FVKV 259
+PVF R LL+ + + VD + G T Y V F T + + FV +
Sbjct: 385 SLHARPVFTRVSLLYRLSAITVDPQVKALDGKT--YDVIFVGTNDGKVIKFVNI 436
>gi|194760726|ref|XP_001962588.1| GF15536 [Drosophila ananassae]
gi|190616285|gb|EDV31809.1| GF15536 [Drosophila ananassae]
Length = 917
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 142/222 (63%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 267 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 326
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPG-----DDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G + YGVF T T + GSA+C+F+++DI
Sbjct: 327 LNCSIPGDYPFYFNEIQSASNLVDGQYGSMNSKLIYGVFNTPTNSIPGSAVCAFALQDIA 386
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ+ S WLPV +++VP PRPG C ND+ L D LNFI++H LMDE V
Sbjct: 387 DTFEGQFKEQSGINSNWLPVNNAKVPHPRPGACHNDSRGLTDPTLNFIKTHSLMDENVPA 446
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ R + FT + VD G T Y V F T
Sbjct: 447 FFGQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 486
>gi|194880807|ref|XP_001974553.1| GG21030 [Drosophila erecta]
gi|190657740|gb|EDV54953.1| GG21030 [Drosophila erecta]
Length = 769
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 153/242 (63%), Gaps = 7/242 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++E++N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGFVLFFFRELSMEFMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM++AV
Sbjct: 347 DGEFKSQKDSQSQWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEDAVPAVHG 406
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEY--IVYFAATTTLRTVFVKVRLLQDVSNTSD 270
+P+ + + L L V +V + Y ++Y T F+ + L N++D
Sbjct: 407 RPLLTKVN-LHHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINI--LSTHPNSTD 463
Query: 271 SI 272
+
Sbjct: 464 RL 465
>gi|195025279|ref|XP_001986034.1| GH21142 [Drosophila grimshawi]
gi|193902034|gb|EDW00901.1| GH21142 [Drosophila grimshawi]
Length = 762
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/334 (39%), Positives = 187/334 (55%), Gaps = 38/334 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ YVFFFFRE ++EY+N GK+V+SRV RVCK D GG ++W ++LKA
Sbjct: 217 QPDFVGAIQRNGYVFFFFRELSMEYMNFGKAVYSRVGRVCKNDRGGPYNHGKSWTSFLKA 276
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C++ ++DI AF
Sbjct: 277 RLNCSMPGEFPFYFDEIQAISPIVESGANAMVYAVFTTSVNAIPGSAVCAYRVDDILAAF 336
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV ++VP+PRPGQCV+D+ TL +NFI++HPLM+ AV
Sbjct: 337 NGDFKSQKDSQSHWLPVEQTQVPKPRPGQCVDDSRTLTSIAVNFIKNHPLMETAVPAVHG 396
Query: 213 KPVFYRRDL--LFTHLVVDVV-------QYEVF--GTTSEYIVYFAATTT---------L 252
+P+ + +L T + VD +Y+V GT + F T T L
Sbjct: 397 RPLLTKVNLHHRLTAISVDPQVRALNGKKYDVVYSGTDDGKVTKFINTVTMHQNGSTERL 456
Query: 253 RTVFVK----------VRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302
RTV + VR L +S+ +++ S GRL S+ + C L S+
Sbjct: 457 RTVVISEMQVLPLGTPVRELV-ISSKKNTLVVVSDGRLVTVPLHHCSLIVDCLGCL--SL 513
Query: 303 ANQPMSW---YHYSKDKGRYQIKFRSDKFIRTVD 333
+ +W H K+ Q KF + ++++++
Sbjct: 514 QDPNCAWDLQTHECKNLAASQHKFGTKSYLQSLN 547
>gi|195487804|ref|XP_002092047.1| GE13973 [Drosophila yakuba]
gi|194178148|gb|EDW91759.1| GE13973 [Drosophila yakuba]
Length = 770
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 134/189 (70%), Gaps = 2/189 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++E++N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGFVLFFFRELSMEFMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLVYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM++AV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEDAVPAVHG 406
Query: 213 KPVFYRRDL 221
+P+ + +L
Sbjct: 407 RPLLTKVNL 415
>gi|242005253|ref|XP_002423485.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
gi|212506580|gb|EEB10747.1| Semaphorin-1A precursor, putative [Pediculus humanus corporis]
Length = 635
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 136/202 (67%), Gaps = 8/202 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S YVFFFFRETAVEY+NCGK V+SRVARVCK D GG + W ++LK+R
Sbjct: 134 PSFVSSVAYEDYVFFFFRETAVEYMNCGKKVYSRVARVCKHDKGGPHQFGDRWTSFLKSR 193
Query: 96 LNCSIPGEFPFYFNEIQDIYK----VPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG++PFYF+EIQ + + + G + YGVFTT + GSA+C+F+++ I
Sbjct: 194 LNCSVPGDYPFYFDEIQSMSEMVEGIYGQRSAQLMYGVFTTPINSIGGSAVCAFNMQSIL 253
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ + S WLPV ++VPEPRPGQCVND+ TLPD +NF++SH LMD AV
Sbjct: 254 DTFEGPFKEQESMNSNWLPVPITKVPEPRPGQCVNDSRTLPDVSVNFVKSHTLMDYAVPA 313
Query: 210 RDNKPVFYR--RDLLFTHLVVD 229
++PV R FT + VD
Sbjct: 314 FFSRPVLIRISSQYRFTKVAVD 335
>gi|307173151|gb|EFN64251.1| Semaphorin-1A [Camponotus floridanus]
Length = 738
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/242 (46%), Positives = 144/242 (59%), Gaps = 22/242 (9%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGK------------SVFSRVARVCKRDTGGK 81
L P+FV S G +V+FFFRETAVEYINCGK +V+SRVARVCK D GG
Sbjct: 166 LAPNFVNSMSQGDFVYFFFRETAVEYINCGKCNLPRWRSLHSQAVYSRVARVCKYDRGGP 225
Query: 82 NILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGL 135
+ W ++LK+RLNCS+ G+FPFYFNEIQ ++ G + YG FTT +
Sbjct: 226 HRFRNRWTSFLKSRLNCSVTGDFPFYFNEIQSTTELISGQYGGTSAQLIYGTFTTPVNSI 285
Query: 136 MGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLN 195
GSA+C+FS++DI F G FKEQ+ S WLPV ++VP+PRPGQC ND+ TLPD LN
Sbjct: 286 SGSAVCAFSLQDIADTFAGNFKEQSAMNSNWLPVQDTKVPDPRPGQCTNDSRTLPDLTLN 345
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
FI +H LMDE+V +P+ R FT + VD G T Y V F T +
Sbjct: 346 FINTHSLMDESVPSFFGQPIVIRTSFHYRFTQIAVDPQVKTPGGKT--YDVLFIGTDNGK 403
Query: 254 TV 255
+
Sbjct: 404 VI 405
>gi|195154988|ref|XP_002018389.1| GL17680 [Drosophila persimilis]
gi|194114185|gb|EDW36228.1| GL17680 [Drosophila persimilis]
Length = 773
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 149/229 (65%), Gaps = 5/229 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++E++N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 231 QPDFVGTIERKGFVLFFFRELSMEFMNFGKAVYSRVARVCKNDRGGPYNHGKSWTSFLKA 290
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PG+FPFYF+EIQ I + G D+ Y VFTTS + GSA+C+F++EDI AF
Sbjct: 291 RLNCSVPGDFPFYFDEIQAISPIVERGADSLVYAVFTTSVNAIPGSAVCAFNVEDILAAF 350
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV VP+PRPGQCV+D+ TL +NF+++HPLM++AV
Sbjct: 351 DGDFKSQKDSQSHWLPVEREAVPKPRPGQCVDDSRTLTSIAVNFVKNHPLMEKAVPAVHR 410
Query: 213 KPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKV 259
+P+ + +L T + VD + G T + ++Y T F+ +
Sbjct: 411 RPLLTKVNLHHRLTAIAVDPQIKALNGATYD-VIYSGTDDGKVTKFINI 458
>gi|195431764|ref|XP_002063898.1| GK15918 [Drosophila willistoni]
gi|194159983|gb|EDW74884.1| GK15918 [Drosophila willistoni]
Length = 775
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 131/190 (68%), Gaps = 8/190 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E++N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 228 QPDFVGTIERKGYVLFFFRELSMEFMNFGKAVYSRVARVCKNDRGGPYNHGKSWTSFLKA 287
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I V G T Y VFTTST + GSA+C+F++++I AF
Sbjct: 288 RLNCSMPGEFPFYFDEIQAISPVVESGSQTLVYAVFTTSTNAIPGSAVCAFNVDEILAAF 347
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S W PV +VP+PRPGQCV D+ TL +NFI++HPLM+ AV
Sbjct: 348 DGDFKSQKDSQSHWAPVEQEQVPKPRPGQCVEDSRTLSSIAVNFIKTHPLMEMAV----- 402
Query: 213 KPVFYRRDLL 222
P Y R LL
Sbjct: 403 -PSLYSRPLL 411
>gi|8134679|sp|Q26972.1|SEM1A_TRICF RecName: Full=Semaphorin-1A; AltName: Full=Semaphorin-I; Flags:
Precursor
gi|436568|gb|AAA16609.1| semaphorin-I [Tribolium confusum]
Length = 712
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 132/203 (65%), Gaps = 10/203 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G Y+FFF+RETAVEY+NCGK ++SRVARVCK D GG + W ++LKAR
Sbjct: 204 PNFVNSVAYGDYIFFFYRETAVEYMNCGKVIYSRVARVCKDDKGGPHQSRDRWTSFLKAR 263
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTK--FYGVFTTSTTGLMGSAICSFSIEDI 148
LNCSIPGE+PFYF+EIQ + DD+K YG+ TT + GSAIC++ + DI
Sbjct: 264 LNCSIPGEYPFYFDEIQSTSDIVEGRYNSDDSKKIIYGILTTPVNAIGGSAICAYQMADI 323
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
R F G FK Q T S WLPV + VPEPRPGQCV D+ LPD +NFI++H LM E V
Sbjct: 324 LRVFEGSFKHQETINSNWLPVPQNLVPEPRPGQCVRDSRILPDKNVNFIKTHSLM-EDVP 382
Query: 209 HRDNKPVFYRRDLL--FTHLVVD 229
KPV R L FT + VD
Sbjct: 383 ALFGKPVLVRVSLQYRFTAITVD 405
>gi|198458928|ref|XP_001361193.2| GA19600 [Drosophila pseudoobscura pseudoobscura]
gi|198136514|gb|EAL25771.2| GA19600 [Drosophila pseudoobscura pseudoobscura]
Length = 774
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 5/229 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++E++N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 232 QPDFVGTIERKGFVLFFFRELSMEFMNFGKAVYSRVARVCKNDRGGPYNHGKSWTSFLKA 291
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PG+FPFYF+EIQ I + G D+ Y VFTTS + GSA+C+F+++DI AF
Sbjct: 292 RLNCSVPGDFPFYFDEIQAISPIVERGADSLVYAVFTTSVNAIPGSAVCAFNVDDILAAF 351
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV VP+PRPGQCV+D+ TL +NF+++HPLM++AV
Sbjct: 352 DGDFKSQKDSQSHWLPVEREAVPKPRPGQCVDDSRTLTSIAVNFVKNHPLMEKAVPAVHR 411
Query: 213 KPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKV 259
+P+ + +L T + VD + G T + ++Y T F+ +
Sbjct: 412 RPLLTKVNLHHRLTAIAVDPQIKALNGATYD-VIYSGTDDGKVTKFINI 459
>gi|194755813|ref|XP_001960174.1| GF13235 [Drosophila ananassae]
gi|190621472|gb|EDV36996.1| GF13235 [Drosophila ananassae]
Length = 753
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++E++N GK+V+SRVARVCK D GG ++W T+LKA
Sbjct: 214 QPDFVGAIEKNGFVLFFFRELSMEFMNFGKAVYSRVARVCKNDKGGPYNHGKSWTTFLKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PG+FPFYF+EIQ I V G + Y VFTTS + GSA+C+F ++DI AF
Sbjct: 274 RLNCSVPGDFPFYFDEIQAISPVVESGSKSLVYAVFTTSVNAIPGSAVCAFDVDDILAAF 333
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV +VP+PRPGQCV D+ T+ +NFI++HPLM+ AV
Sbjct: 334 EGDFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTVSSIAVNFIKTHPLMENAVPAVHG 393
Query: 213 KPVFYRRDL--LFTHLVVD 229
+P+ + +L T + VD
Sbjct: 394 RPLLTKVNLHHRLTAIAVD 412
>gi|312370919|gb|EFR19219.1| hypothetical protein AND_22880 [Anopheles darlingi]
Length = 899
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 151/246 (61%), Gaps = 23/246 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP FV + + YV FFFRE A+EY+NCGK+++SRVARVCK D GG W +YLKA
Sbjct: 322 QPAFVSAIEHNGYVMFFFREVAIEYMNCGKAIYSRVARVCKNDKGGPYPFQDRWTSYLKA 381
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-----PGDDTK-FYGVFTTSTTGLMGSAICSFSIEDI 148
RLNCSIPGE+PFYF+E+Q K GD + Y + TT + GSA+C+FS++DI
Sbjct: 382 RLNCSIPGEYPFYFDELQATTKTINGTYGGDRNQIIYAIMTTPENAIGGSAVCAFSVQDI 441
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
AF G FK Q S WL V S VPEPRPG+CV+D+ TLP + +NF++S+ LMD AV
Sbjct: 442 LEAFEGPFKAQRDIHSNWLQVPQSAVPEPRPGKCVDDSRTLPKASVNFVKSNNLMDSAVR 501
Query: 209 HRDNKPVFYRRDLLF---------THLVVDVVQYEVF--GTTSEYIVYF----AATTT-- 251
++PVF R L + L +D ++Y+V GT ++ F +A T+
Sbjct: 502 SLHSRPVFTRVSLYYRLSAIAVDPQVLALDGLRYDVIFVGTNDGKVIKFVNILSANTSDD 561
Query: 252 LRTVFV 257
+RTV +
Sbjct: 562 VRTVVI 567
>gi|391335245|ref|XP_003742006.1| PREDICTED: semaphorin-1A-like [Metaseiulus occidentalis]
Length = 706
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 148/247 (59%), Gaps = 18/247 (7%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S IG +V+FFFRETA+EY+NCGK+++SRVARVC D G + ++ + ++LKAR
Sbjct: 185 PQFVSSMHIGSHVYFFFRETAIEYLNCGKAIYSRVARVCTNDEGISD-RNKKFTSFLKAR 243
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG+ PFYFNE+Q + GD + Y V T + GSA+C+F +EDI
Sbjct: 244 LNCSIPGDIPFYFNELQSTSSIVDGSYNGDRARLIYSVLNTGLNSIFGSAVCAFRVEDIS 303
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FKEQ S WLPV++SRVPEPRPGQCVN++++LP + L FI+ HPLMD AV
Sbjct: 304 EVFNGPFKEQENKNSNWLPVINSRVPEPRPGQCVNNSKSLPQATLTFIKEHPLMDLAVPA 363
Query: 210 RDNKPVFYRRDLLFTHLVVDV---------VQYEVF--GTTSEYIVYFAATTTLRTVFVK 258
+P+ + + V V Y+V GT ++V +LR
Sbjct: 364 YFGRPIVVHTGFNYRYTCVAVDGQVEGVNGKMYDVLFIGTDHGHVVKVVNVASLRAEHQG 423
Query: 259 VRLLQDV 265
+++DV
Sbjct: 424 PAVVEDV 430
>gi|195382057|ref|XP_002049749.1| GJ21763 [Drosophila virilis]
gi|194144546|gb|EDW60942.1| GJ21763 [Drosophila virilis]
Length = 757
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 185/334 (55%), Gaps = 38/334 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E++N GK+V+SRV RVCK D GG ++W ++LKA
Sbjct: 211 QPDFVGAIERNGYVLFFFRELSMEFMNFGKAVYSRVGRVCKNDRGGPYNHGKSWTSFLKA 270
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTT + GSA+C++ ++DI AF
Sbjct: 271 RLNCSVPGEFPFYFDEIQAISPIVESGSNALVYAVFTTPVNAIPGSAVCAYRLDDILAAF 330
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV ++VP+PRPGQCV D+ TL +NFI++HPLM+ AV
Sbjct: 331 DGDFKSQKDSQSHWLPVEQTQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMESAVPAVHG 390
Query: 213 KPVFYRRDL--LFTHLVVDVV-------QYEVF--GTTSEYIVYF---------AATTTL 252
+P+ + +L T + VD Y+V GT + F ++T L
Sbjct: 391 RPLLTKVNLHHRLTAITVDPQVRALNGNHYDVIYSGTDDGKVTKFINILTTHQNSSTDRL 450
Query: 253 RTVFVK----------VRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302
RTV + VR L +S+ +++ S GRL S+ + C L S+
Sbjct: 451 RTVVISEMQVLPLGTPVRELV-ISSKKNTLVVVSDGRLVTVPLHHCSLIVDCLGCL--SL 507
Query: 303 ANQPMSW---YHYSKDKGRYQIKFRSDKFIRTVD 333
+ +W H K+ Q KF + ++++++
Sbjct: 508 QDPNCAWDLQTHECKNLAASQHKFGTKTYMQSLN 541
>gi|195123195|ref|XP_002006093.1| GI18743 [Drosophila mojavensis]
gi|193911161|gb|EDW10028.1| GI18743 [Drosophila mojavensis]
Length = 782
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 134/199 (67%), Gaps = 4/199 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + +V FFFRE ++EY+N GK+V+SRV RVCK D GG +++W ++LK
Sbjct: 236 QPDFVGAIERNGFVLFFFRELSMEYMNFGKAVYSRVGRVCKNDRGGPYNHAKSWTSFLKT 295
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I V G + Y VFTT + GSA+C++ ++DI AF
Sbjct: 296 RLNCSVPGEFPFYFDEIQAISPVVESGPNALVYAVFTTPVNAIPGSAVCAYRVDDILAAF 355
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G FK Q S S WLPV ++VP+PRPGQCV D+ TL +NFI++HPLM+ AV
Sbjct: 356 DGAFKSQKDSQSHWLPVEQTQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMESAVPAVHG 415
Query: 213 KPVFYRRDL--LFTHLVVD 229
+P+ + +L T + VD
Sbjct: 416 RPLLTKVNLHHRLTAIAVD 434
>gi|170027624|ref|XP_001841697.1| semaphorin [Culex quinquefasciatus]
gi|167862267|gb|EDS25650.1| semaphorin [Culex quinquefasciatus]
Length = 747
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 149/234 (63%), Gaps = 11/234 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP FV + + YV FFFRE AVEY+NCGK+++SRV+RVCK D GG + L+ W +++KA
Sbjct: 177 QPAFVSAVEHNGYVLFFFREIAVEYMNCGKAIYSRVSRVCKNDKGGPHPLNDRWTSFVKA 236
Query: 95 RLNCSIPGEFPFYFNEIQDIYK-VPG-----DDTKFYGVFTTSTTGLMGSAICSFSIEDI 148
RLNCSIPGE+PFYF+EIQ K + G + Y + TT + GSA+C+FSI+DI
Sbjct: 237 RLNCSIPGEYPFYFDEIQSTTKTIEGLYGGVRNQIIYAIMTTPDNAIGGSAVCAFSIQDI 296
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
F G FK Q S W+ V S+VPEPRPG+CV+D+ TLP + +NF++ + LMD +V
Sbjct: 297 LDTFEGPFKSQRDMHSNWMQVPQSQVPEPRPGKCVDDSRTLPKASVNFVKMNTLMDMSVQ 356
Query: 209 HRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTV-FVKV 259
++P+F R LL+ + + VD + GTT Y V F T + + FV V
Sbjct: 357 SLHSRPLFTRVSLLYRLSAITVDPQVEALDGTT--YDVVFVGTNDGKVIKFVNV 408
>gi|158294685|ref|XP_001688723.1| AGAP005742-PA [Anopheles gambiae str. PEST]
gi|157015680|gb|EDO63729.1| AGAP005742-PA [Anopheles gambiae str. PEST]
Length = 769
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 15/247 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP FV + + YV FF+RE A+EY+NCGK+++SRV+RVCK D GG W ++LKA
Sbjct: 192 QPAFVSAIEYNGYVMFFYREVAMEYMNCGKAIYSRVSRVCKNDKGGPYPFQDKWTSFLKA 251
Query: 95 RLNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDI 148
RLNCSIPGE+PFYF+E+Q + G + YG+ TT + GSA+C+FS+EDI
Sbjct: 252 RLNCSIPGEYPFYFDELQATTNAISGTYGGVRNKIIYGIMTTPENAIGGSAVCAFSVEDI 311
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
AF G FK Q S WL V S VPEPRPG+CV+D+ TLP +++NF++++ LMD +V
Sbjct: 312 MEAFEGPFKAQRDIHSNWLQVPPSAVPEPRPGKCVDDSRTLPKALVNFVKTNNLMDSSVP 371
Query: 209 HRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTV-FVKVRLLQDV 265
++PVF R L + + + VD + G Y V F T + + FV +
Sbjct: 372 SVHSRPVFTRVSLYYRLSAIAVDPQVKALDG--QRYDVIFVGTNDGKVIKFVNIL----S 425
Query: 266 SNTSDSI 272
+NTSD +
Sbjct: 426 ANTSDDV 432
>gi|158294687|ref|XP_315755.4| AGAP005742-PB [Anopheles gambiae str. PEST]
gi|157015681|gb|EAA10953.4| AGAP005742-PB [Anopheles gambiae str. PEST]
Length = 766
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 15/247 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QP FV + + YV FF+RE A+EY+NCGK+++SRV+RVCK D GG W ++LKA
Sbjct: 192 QPAFVSAIEYNGYVMFFYREVAMEYMNCGKAIYSRVSRVCKNDKGGPYPFQDKWTSFLKA 251
Query: 95 RLNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDI 148
RLNCSIPGE+PFYF+E+Q + G + YG+ TT + GSA+C+FS+EDI
Sbjct: 252 RLNCSIPGEYPFYFDELQATTNAISGTYGGVRNKIIYGIMTTPENAIGGSAVCAFSVEDI 311
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
AF G FK Q S WL V S VPEPRPG+CV+D+ TLP +++NF++++ LMD +V
Sbjct: 312 MEAFEGPFKAQRDIHSNWLQVPPSAVPEPRPGKCVDDSRTLPKALVNFVKTNNLMDSSVP 371
Query: 209 HRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTV-FVKVRLLQDV 265
++PVF R L + + + VD + G Y V F T + + FV +
Sbjct: 372 SVHSRPVFTRVSLYYRLSAIAVDPQVKALDG--QRYDVIFVGTNDGKVIKFVNIL----S 425
Query: 266 SNTSDSI 272
+NTSD +
Sbjct: 426 ANTSDDV 432
>gi|357622029|gb|EHJ73649.1| Semaphorin-1A [Danaus plexippus]
Length = 602
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 139/229 (60%), Gaps = 9/229 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVG+ +V+FF+RETAVEY+NCGKSV+SRVARVC D GG + + W ++LKAR
Sbjct: 55 PSFVGAVASTSHVYFFYRETAVEYMNCGKSVYSRVARVCLNDKGGPHPFNDRWTSFLKAR 114
Query: 96 LNCSIPGEFPFYFNEIQ-------DIYKVPGDDTKF-YGVFTTSTTGLMGSAICSFSIED 147
LNCSIPGE+PFYF+EIQ +Y G+ Y VFTT + GSA+C+F++ D
Sbjct: 115 LNCSIPGEYPFYFDEIQATTEIINGVYGNGGNRNDIVYAVFTTPQNAIGGSAVCAFAMRD 174
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPE-PRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
I AF G FK Q S WL + +VP+ P+PG CV D+ TL DS +NFI++HPLMD+A
Sbjct: 175 ILDAFEGPFKGQKNMNSNWLQLPKEKVPQPPQPGSCVEDSRTLSDSAINFIKTHPLMDKA 234
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
V +P+ R L + + + ++Y V + T R +
Sbjct: 235 VPSFLARPILIRVSLQYRFSAIAIHPQVQSMNGNKYDVMYVGTDDGRVI 283
>gi|443714202|gb|ELU06726.1| hypothetical protein CAPTEDRAFT_179561 [Capitella teleta]
Length = 542
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 130/195 (66%), Gaps = 12/195 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+PDFV S++ V+FFFRETAVEYINCGK+ FSRVARVCK D GG+ +L + ++ KA
Sbjct: 166 EPDFVSSFEHEDKVYFFFRETAVEYINCGKARFSRVARVCKNDRGGERMLRNTFTSFFKA 225
Query: 95 RLNCSIPGEFPFYFNEIQ---DIYK---VPG-----DDTKFYGVFTTSTTGLMGSAICSF 143
RLNCSIPGE+PFYF+EIQ DI K +P +T Y VFTT + GSA+C+F
Sbjct: 226 RLNCSIPGEYPFYFDEIQSTSDIGKGNVIPSVVLSDRETMIYAVFTTPQNSIGGSAVCAF 285
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ-CVNDTETLPDSVLNFIRSHPL 202
D+ + F G FKEQ +++S WLPV S P P P + C+ND+ + S LNFI++HPL
Sbjct: 286 RFSDVLKTFEGPFKEQKSASSNWLPVKESEHPIPHPAKTCINDSYNIQSSHLNFIKTHPL 345
Query: 203 MDEAVAHRDNKPVFY 217
MD+AV P+ Y
Sbjct: 346 MDKAVPTFGGAPILY 360
>gi|312065915|ref|XP_003136020.1| sema domain-containing protein [Loa loa]
gi|307768806|gb|EFO28040.1| sema domain-containing protein [Loa loa]
Length = 521
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 130/200 (65%), Gaps = 4/200 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+PDFV S++I KYV+FFFRE A+E NC VFSRVAR+CK+D GGKN+L Q W T++KA
Sbjct: 218 EPDFVASFNIDKYVYFFFREIAIERENCEHIVFSRVARICKKDVGGKNVLRQVWTTFVKA 277
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS +FP YFNE+Q + V G D+ FY FTT GSA+C FS+ I + F
Sbjct: 278 RLNCSTSSKFPVYFNELQSLQSVDGRSDSLFYATFTTPDISFGGSAVCVFSLNSISQLFD 337
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F EQ +S W+ VPE RPG C ++ ++ DS L+F RSH LM +AV+ +
Sbjct: 338 HGYFLEQTSSDDGWIITPPENVPEHRPGTCTANSASVSDSSLHFARSHLLMADAVS--TD 395
Query: 213 KPVFYRRDLLFTHLVVDVVQ 232
+P+ RD L TH+ VD ++
Sbjct: 396 RPLLVLRDELLTHIAVDTME 415
>gi|170592713|ref|XP_001901109.1| Sema domain containing protein [Brugia malayi]
gi|158591176|gb|EDP29789.1| Sema domain containing protein [Brugia malayi]
Length = 656
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 128/197 (64%), Gaps = 4/197 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+PDFV S+ IGKYV+FFFRE A+E NC + VFSRVAR+CK+D GGKN+L Q W T++KA
Sbjct: 224 EPDFVASFSIGKYVYFFFREVAIERENCERVVFSRVARICKKDVGGKNVLRQVWTTFVKA 283
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS + YFNE+Q + + G DT FY F T GSA+C FS+ I++ F
Sbjct: 284 RLNCSTSSKLSIYFNELQSLQSIDGRSDTLFYATFITPEISFGGSAVCVFSLNSIDQLFD 343
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F EQ + +W+ VPE RPG C ++ ++PDS L+F RSH LM +A++ +
Sbjct: 344 HGYFLEQTSLDGSWITTSPKNVPEHRPGACTANSASVPDSTLHFARSHLLMADAIS--AD 401
Query: 213 KPVFYRRDLLFTHLVVD 229
+P+ RD L TH+ +D
Sbjct: 402 QPLLVLRDELLTHIAID 418
>gi|432882289|ref|XP_004073961.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1132
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 148/262 (56%), Gaps = 27/262 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + D G YV+FF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 206 EPHFLHAIDYGNYVYFFLSEIAVEYTALGKMVFSRVARVCKNDNGGSPRVLDRYWTSFLK 265
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIER
Sbjct: 266 ARLNCSVPGDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIERV 325
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPLM 203
F GKFKEQ TS S+W PV +VP PRPG C D PD +L FI+S+PLM
Sbjct: 326 FNGKFKEQRTSDSSWTPVPEEQVPRPRPGTCAGDGPASDYKSSVEFPDEMLTFIKSYPLM 385
Query: 204 DEAVAHRDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR- 260
DEAV+ +++P F R T +VVDV G + V F + R + V R
Sbjct: 386 DEAVSSANDRPCFTRTSSRSKLTQIVVDVSA----GPNKDRTVMFLGSDDGRVLKVLART 441
Query: 261 ---------LLQDVSNTSDSIC 273
LL+D+ + S C
Sbjct: 442 HSNDSFGSKLLEDIDVYNPSKC 463
>gi|269785007|ref|NP_001161655.1| semaphorin II-like protein precursor [Saccoglossus kowalevskii]
gi|268054317|gb|ACY92645.1| semaphorin II-like protein [Saccoglossus kowalevskii]
Length = 727
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 152/253 (60%), Gaps = 18/253 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLK 93
+PDF+ S+DIG+ VFFF RE A+EY N GK V+SRVA+VCK+D GG + +L W T+LK
Sbjct: 206 EPDFISSFDIGQEVFFFLREIAMEYSNYGKIVYSRVAKVCKKDQGGSDHVLENIWTTFLK 265
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK-----FYGVFTTSTTGLMGSAICSFSIEDI 148
AR+ CS PGEFPFYFN IQD +K+ ++ FY VFTT + GSAIC++++ D+
Sbjct: 266 ARIICSFPGEFPFYFNNIQDTFKISYEEIGKTTNIFYAVFTTPKNAIPGSAICAYNLTDV 325
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
F G F + ++ AWLPV VP+PRPG CV+D+ + + L F +SH LM + +
Sbjct: 326 NAVFNGGFLAKDSAKHAWLPVEDDIVPDPRPGTCVDDSTSHSYNDLLFFKSHTLMSDTLN 385
Query: 209 HRDNKPVF--YRRDLLFTHLVVDVVQ-----YEVFGTTSEY-----IVYFAATTTLRTVF 256
P+F R+D T +VVD VQ Y+V +++ +V F ++
Sbjct: 386 PSSGYPLFTVTRQDYTLTQIVVDRVQTGSGTYDVMFIGTDHGQVLKVVLFVENGQQKSNL 445
Query: 257 VKVRLLQDVSNTS 269
+ V + D S+++
Sbjct: 446 IDVMYVGDPSDSN 458
>gi|348525681|ref|XP_003450350.1| PREDICTED: semaphorin-6D [Oreochromis niloticus]
Length = 1089
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 165/289 (57%), Gaps = 26/289 (8%)
Query: 11 YVASD----ERIKQIALVMCAHRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGK 64
++ASD + + + V+ +YD+ +P F+ + + G YV+FFF E AVEY GK
Sbjct: 200 FLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTTLGK 259
Query: 65 SVFSRVARVCKRDTGGK-NILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTK 123
VFSRVARVCK D GG +L + W ++LKARLNCS+PG+ FYF+ +Q + V + +
Sbjct: 260 VVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQSLTNVLQINHR 319
Query: 124 --FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ 181
GVFTT + GSA+C+F ++DIE+AF GKFKEQ S SAW PV +VP+PRPG
Sbjct: 320 PTVLGVFTTQANSITGSAVCAFYMDDIEKAFSGKFKEQKNSESAWTPVPEEQVPKPRPGC 379
Query: 182 CVND--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
C + + PD L FI+S+PLMDE+V +++P F R F T + VD
Sbjct: 380 CAGEGSAAAYKSSTNFPDETLTFIKSYPLMDESVPSVNDRPFFTRTTSRFKLTQIAVDTS 439
Query: 232 -----QYEV--FGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSIC 273
Y V G+ + +++ A+T +LL+D+ + + C
Sbjct: 440 AGPYKNYTVVFLGSDNGHVLKILASTEGANASFSTQLLEDLDVYNPNKC 488
>gi|324505574|gb|ADY42394.1| Semaphorin-2A [Ascaris suum]
Length = 661
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 188/398 (47%), Gaps = 69/398 (17%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FV S IG YV+FF RE AVE+ NCG+ V+SRVAR+CK+D GGKN+L Q W +++KA
Sbjct: 208 EPQFVSSLSIGSYVYFFLREVAVEHENCGRVVYSRVARLCKKDVGGKNVLRQVWTSFVKA 267
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGD-DTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCSI +FP YF++IQ + +V G DT FY TT+ GSA+C FS+ I + F
Sbjct: 268 RLNCSISSQFPLYFDQIQSVQRVDGRMDTLFYATLTTADVAFGGSAVCVFSLNAINQLFD 327
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F EQ T+ S+W VP RPG CV ++ + D L+F +SH LM EAV+
Sbjct: 328 QGMFAEQITTGSSWTTTPPESVPPHRPGTCVANSAAITDGELHFAKSHLLMAEAVS--AG 385
Query: 213 KPVFYRRDLLFTHLVVDVV--------------------QYE-VFGTTSEYIVYFA---- 247
P+ LFTH+ VDV+ +E G+ S+ + +
Sbjct: 386 PPLLTLAQELFTHIAVDVLPSVNVIFVYSHNTRKIFKLSHWEGAVGSESQLLASYELEAS 445
Query: 248 ----ATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTV----TWGQSVHLSCFVK-- 297
A L T F+ V + VS S C+ + ++ V +W + L CF +
Sbjct: 446 QSAFAIALLPTEFLYVSDAKSVSQYLLSQCQLYITCVQCAVDPYCSWSSARSL-CFRRKT 504
Query: 298 ---------------LPASMAN--------QPMSWYHYSKDKGRYQIKFRSDKFIR---- 330
P M N P H S + F ++ I
Sbjct: 505 AHSSAVGWVNAGPGETPKCMGNVRRNSIRAYPGDALHLSCEVDSPSWSFNGNRLIASPQK 564
Query: 331 --TVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVD 366
T GGLV++ V ++G Y+C L + + VD
Sbjct: 565 PFTTMGGLVLLNVSGAESGVYECSFNGEPLVVYEVEVD 602
>gi|324504321|gb|ADY41866.1| Semaphorin-2A [Ascaris suum]
Length = 725
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 127/199 (63%), Gaps = 4/199 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FV S IG YV+FF RE AVE+ NCG+ V+SRVAR+CK+D GGKN+L Q W +++KA
Sbjct: 253 EPQFVSSLSIGSYVYFFLREVAVEHENCGRVVYSRVARLCKKDVGGKNVLRQVWTSFVKA 312
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGD-DTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCSI +FP YF++IQ + +V G DT FY TT+ GSA+C FS+ I + F
Sbjct: 313 RLNCSISSQFPLYFDQIQSVQRVDGRMDTLFYATLTTADVAFGGSAVCVFSLNAINQLFD 372
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F EQ T+ S+W VP RPG CV ++ + D L+F +SH LM EAV+
Sbjct: 373 QGMFAEQITTGSSWTTTPPESVPPHRPGTCVANSAAITDGELHFAKSHLLMAEAVS--AG 430
Query: 213 KPVFYRRDLLFTHLVVDVV 231
P+ LFTH+ VDV+
Sbjct: 431 PPLLTLAQELFTHIAVDVL 449
>gi|432910788|ref|XP_004078525.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1153
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 163/289 (56%), Gaps = 26/289 (8%)
Query: 11 YVASD----ERIKQIALVMCAHRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGK 64
++ASD + + + V+ +YD+ +P F+ + + G YV+FFF E AVEY GK
Sbjct: 268 FLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTTLGK 327
Query: 65 SVFSRVARVCKRDTGGK-NILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTK 123
VFSRVARVCK D GG +L + W ++LKARLNCS+PG+ FYF+ +Q + V + +
Sbjct: 328 VVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQSLTNVLQINHR 387
Query: 124 --FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ 181
GVF+T + GSA+C+F ++DIE+AF GKFKEQ S SAW PV +VP+PRPG
Sbjct: 388 PAVLGVFSTQANSITGSAVCAFYMDDIEKAFNGKFKEQRNSESAWTPVPEEQVPKPRPGS 447
Query: 182 CVND--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
C + + PD L FI+S+PLMDE++ ++KP F R F T + VD
Sbjct: 448 CAGEGSAAAYKTSTAFPDETLTFIKSYPLMDESIPSVNDKPFFTRTTSRFKLTQIAVDTS 507
Query: 232 QYE-------VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSIC 273
G+ + +++ A+T +LL+D+ + + C
Sbjct: 508 AGPYKNHTVVFLGSDNGHVLKILASTEGANASFSTQLLEDIDVYNPNKC 556
>gi|405962655|gb|EKC28312.1| Semaphorin-1A [Crassostrea gigas]
Length = 690
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 14/194 (7%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FVGS+DI ++FFFRETAVE+INCGK+VFSRVAR+CK D GG+ ++ W ++ KAR
Sbjct: 139 PNFVGSFDIKDKIYFFFRETAVEHINCGKTVFSRVARICKNDRGGQIMMKSIWTSFFKAR 198
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDD-----------TKFYGVFTTSTTGLMGSAICSFS 144
LNCSIPGE+PFY +EIQ ++ + FY VF T + + GSA+C+F
Sbjct: 199 LNCSIPGEYPFYLDEIQSTSEMGQGNYMSTDRSDNRTDMFYAVFRTPSNSIQGSAVCAFK 258
Query: 145 IEDIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPL 202
+ DIE+ F+GKFK Q ++ WLP+ S P+ P P CVND+ + + +LNFI+SH L
Sbjct: 259 LADIEKTFMGKFKGQESTYHNWLPI-SHPNPDRNPHPSICVNDSYQISEPMLNFIKSHTL 317
Query: 203 MDEAVAHRDNKPVF 216
MD AV P+
Sbjct: 318 MDPAVPSAGGSPLI 331
>gi|313661380|ref|NP_001186294.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6E precursor [Danio rerio]
gi|312839808|dbj|BAJ34941.1| semaphorin 6E [Danio rerio]
Length = 1064
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 133/228 (58%), Gaps = 17/228 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + + G YV+FF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 229 EPHFLHAIEYGNYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIE+
Sbjct: 289 ARLNCSVPGDSFFYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPLM 203
F GKFKEQ S SAW PV VP+PRPG C D + PD L FI+S+PLM
Sbjct: 349 FNGKFKEQRNSESAWTPVPDEAVPKPRPGSCAGDGPAAGYKSSTNFPDETLTFIKSYPLM 408
Query: 204 DEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
DEAV +N+P F R F T + VD G Y V F +
Sbjct: 409 DEAVPSVNNRPCFTRTTSRFKLTQIAVDTAA----GPYKNYTVVFLGS 452
>gi|207667298|gb|ACI25106.1| semaphorin 6db, partial [Danio rerio]
Length = 714
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 133/228 (58%), Gaps = 17/228 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + + G YV+FF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 165 EPHFLHAIEYGNYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLK 224
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIE+
Sbjct: 225 ARLNCSVPGDSFFYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKV 284
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPLM 203
F GKFKEQ S SAW PV VP+PRPG C D + PD L FI+S+PLM
Sbjct: 285 FNGKFKEQRNSESAWTPVPDEAVPKPRPGSCAGDGPAAGYKSSTNFPDETLTFIKSYPLM 344
Query: 204 DEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
DEAV +N+P F R F T + VD G Y V F +
Sbjct: 345 DEAVPSVNNRPCFTRTTSRFKLTQIAVDTAA----GPYKNYTVVFLGS 388
>gi|348539610|ref|XP_003457282.1| PREDICTED: semaphorin-6D-like [Oreochromis niloticus]
Length = 598
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 131/210 (62%), Gaps = 15/210 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + D G YV+FF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 230 EPHFLHAIDYGNYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLK 289
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIE+
Sbjct: 290 ARLNCSVPGDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKV 349
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPLM 203
F GKFKEQ TS S+W PV +VP PRPG C D PD L FI+S+PLM
Sbjct: 350 FNGKFKEQRTSDSSWTPVPDEQVPRPRPGTCAGDGSASEYKSSVQFPDETLTFIKSYPLM 409
Query: 204 DEAVAHRDNKPVFYR---RDLLFTHLVVDV 230
DEAV +++P F R R L T +VVDV
Sbjct: 410 DEAVPSVNDRPCFTRTSSRSKL-TQIVVDV 438
>gi|47213712|emb|CAF95143.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1007
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 162/289 (56%), Gaps = 26/289 (8%)
Query: 11 YVASD----ERIKQIALVMCAHRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGK 64
++ASD + + + V+ +YD+ +P F+ + D G YV+FFF E AVEY GK
Sbjct: 170 FLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIDYGNYVYFFFSEIAVEYTALGK 229
Query: 65 SVFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTK 123
VFSRVARVCK D GG +L + W ++LKARLNCS+PG+ FYF+ +Q + V + +
Sbjct: 230 VVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYFDVLQSLTNVLQINRR 289
Query: 124 --FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ 181
GVFTT + GSA+C+F ++D+E+AF GKFKEQ S S W PV +VP+PRPG
Sbjct: 290 PAVLGVFTTQANSITGSAVCAFYMDDVEKAFSGKFKEQRNSESVWTPVPDEQVPKPRPGC 349
Query: 182 CVND--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
C + + PD L FI++ PLMDE+V D++P+F R F + + VD
Sbjct: 350 CAGEGSAAAYKSSTAFPDETLTFIKTFPLMDESVPSVDDRPLFTRTTSRFKLSQVAVDTS 409
Query: 232 QYE-------VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSIC 273
G+ + +++ A+T +LL+D+ + S C
Sbjct: 410 AGPSKNHTVVFLGSDNGHVLKVLASTQGPNATFSTQLLEDLDVYNPSRC 458
>gi|223929910|gb|ACN24613.1| semaphorin precursor [Hirudo medicinalis]
Length = 583
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S+ G ++FFFRETAVE INCGK VFSRVARVC D+GG+ +L W ++ K R
Sbjct: 221 PSFVSSFSYGDRIYFFFRETAVENINCGKVVFSRVARVCANDSGGQRVLRNTWTSFSKVR 280
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTK-----------FYGVFTTSTTGLMGSAICSFS 144
LNCS+PGEFPFYF+EIQ ++ + Y +FTT + GSA+C+F
Sbjct: 281 LNCSLPGEFPFYFDEIQSTSELGSGSLRSTIMTSEQTPMIYALFTTPRNSIRGSAVCAFR 340
Query: 145 IEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ-CVNDTETLPDSVLNFIRSHPLM 203
+ DI +F G +KEQ + WLP+ + P P PG C N + LPD LNFI+SHPLM
Sbjct: 341 MSDIVSSFEGPYKEQRSPFHIWLPLRDA--PVPHPGSFCPNSSRELPDQTLNFIKSHPLM 398
Query: 204 DEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
D AV +P F FT + V Y V F T R +
Sbjct: 399 DRAVPTFGGEPAFIHTGFDFTLTSISVDWQLEAANHRFYDVIFLGTDNGRVI 450
>gi|410904783|ref|XP_003965871.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1081
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 148/260 (56%), Gaps = 20/260 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 230 EPHFLHAIEYGNYVYFFFSEIAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLK 289
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIE+A
Sbjct: 290 ARLNCSVPGDSFFYFDVLQSLTNVLQINRRPAVLGVFTTQANSITGSAVCAFYMDDIEKA 349
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPLM 203
F GKFKEQ S S W PV +VP+PRPG C + + T PD L FI++ PLM
Sbjct: 350 FSGKFKEQRNSESVWTPVPDEQVPKPRPGCCAGEGSAAAYKSSTTFPDETLTFIKTFPLM 409
Query: 204 DEAVAHRDNKPVFYRRDLLF--THLVVDVVQYE-------VFGTTSEYIVYFAATTTLRT 254
DE+V +++P F R F T + VD G+ + +++ A+T
Sbjct: 410 DESVPSVNDRPYFTRTTSRFKLTQIAVDTSAGPYKNHTVVFLGSDNGHVLKVLASTEGAN 469
Query: 255 VFVKVRLLQDVSNTSDSICE 274
LL+D+ + + C+
Sbjct: 470 ASFSTLLLEDIDVYNPNKCD 489
>gi|440908663|gb|ELR58659.1| Semaphorin-6A [Bos grunniens mutus]
Length = 1034
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 128/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRIHGRDV-VLATFSTPYNSIPGSAVCAYDMHDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|363737723|ref|XP_001231859.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6D isoform 1 [Gallus
gallus]
Length = 1078
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 165/299 (55%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HAAGPHQNYTVIFVGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
R LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 455 TRPFSLNDSVLLEEIEAYNHAKCNAESEEDRRVISLQLDRDHHALFVAFSSCVVRIPLS 513
>gi|301764375|ref|XP_002917602.1| PREDICTED: semaphorin-6D-like isoform 3 [Ailuropoda melanoleuca]
Length = 998
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFF+E AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C N + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCANHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIAEEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|301764371|ref|XP_002917600.1| PREDICTED: semaphorin-6D-like isoform 1 [Ailuropoda melanoleuca]
Length = 1073
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFF+E AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C N + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCANHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIAEEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|301764373|ref|XP_002917601.1| PREDICTED: semaphorin-6D-like isoform 2 [Ailuropoda melanoleuca]
Length = 1017
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFF+E AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFQEIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C N + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCANHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIAEEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|354485389|ref|XP_003504866.1| PREDICTED: semaphorin-6D isoform 2 [Cricetulus griseus]
Length = 998
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|354485393|ref|XP_003504868.1| PREDICTED: semaphorin-6D isoform 4 [Cricetulus griseus]
Length = 990
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 199 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 258
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 259 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 317
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 318 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 377
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 378 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 435
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 436 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 492
>gi|444707113|gb|ELW48415.1| Semaphorin-6A [Tupaia chinensis]
Length = 1096
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 137/237 (57%), Gaps = 20/237 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 246 EPYFVQAVDYGSYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 305
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q ++ ++ G D F+T + GSA+C++ + DI
Sbjct: 306 ARLNCSVPGDSHFYFNILQAVTEVIRINGRDV-VLATFSTPFNSIPGSAVCAYDMLDIAS 364
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 365 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSPSLEKYASSNEFPDDTLNFIKTHPL 424
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKV 259
MDEAV N+P F R + T L V GT + ++ A + LR + + V
Sbjct: 425 MDEAVPSIINRPWFLRTMVRPTLLAVT-------GTDTVFMSVPAGRSVLRVIVLAV 474
>gi|354485397|ref|XP_003504870.1| PREDICTED: semaphorin-6D isoform 6 [Cricetulus griseus]
Length = 1030
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|354485391|ref|XP_003504867.1| PREDICTED: semaphorin-6D isoform 3 [Cricetulus griseus]
Length = 1011
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|354485399|ref|XP_003504871.1| PREDICTED: semaphorin-6D isoform 7 [Cricetulus griseus]
Length = 1054
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|426229325|ref|XP_004008741.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6A [Ovis aries]
Length = 1029
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 128/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRIHGRDV-VLATFSTPYNSIPGSAVCAYDMHDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSASLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSVINRPWFLRTMVRYRLTKIAVDTA 428
>gi|354485387|ref|XP_003504865.1| PREDICTED: semaphorin-6D isoform 1 [Cricetulus griseus]
Length = 1073
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|359323441|ref|XP_003640100.1| PREDICTED: semaphorin-6D-like isoform 3 [Canis lupus familiaris]
Length = 998
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDAAVPPIADEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|359323437|ref|XP_003640098.1| PREDICTED: semaphorin-6D-like isoform 1 [Canis lupus familiaris]
Length = 1073
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDAAVPPIADEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|354485395|ref|XP_003504869.1| PREDICTED: semaphorin-6D isoform 5 [Cricetulus griseus]
Length = 1017
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDHSA--GPYQNYTVIFVGSEAGIVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNQAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCIVRIPLS 513
>gi|300794149|ref|NP_001180138.1| semaphorin-6A precursor [Bos taurus]
gi|296485559|tpg|DAA27674.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6A [Bos taurus]
Length = 1029
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHIHGRDV-VLATFSTPYNSIPGSAVCAYDMHDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|359323443|ref|XP_003640101.1| PREDICTED: semaphorin-6D-like isoform 4 [Canis lupus familiaris]
Length = 1017
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDAAVPPIADEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|426233368|ref|XP_004010689.1| PREDICTED: semaphorin-6D isoform 2 [Ovis aries]
Length = 1011
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|359323439|ref|XP_003640099.1| PREDICTED: semaphorin-6D-like isoform 2 [Canis lupus familiaris]
Length = 1011
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDAAVPPIADEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|311244800|ref|XP_003121572.1| PREDICTED: semaphorin-6D [Sus scrofa]
Length = 1073
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|397522979|ref|XP_003831524.1| PREDICTED: semaphorin-6D isoform 5 [Pan paniscus]
Length = 998
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIMQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|300798537|ref|NP_001178062.1| semaphorin-6D precursor [Bos taurus]
gi|296483145|tpg|DAA25260.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6D [Bos taurus]
Length = 1073
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|431907974|gb|ELK11581.1| Semaphorin-6A [Pteropus alecto]
Length = 1030
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 128/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGHDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDDRVPKPRPGCCAGSPSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSVINRPWFLRTMVRYHLTKIAVDTA 428
>gi|426233366|ref|XP_004010688.1| PREDICTED: semaphorin-6D isoform 1 [Ovis aries]
Length = 1073
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|426233372|ref|XP_004010691.1| PREDICTED: semaphorin-6D isoform 4 [Ovis aries]
Length = 1017
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|426233370|ref|XP_004010690.1| PREDICTED: semaphorin-6D isoform 3 [Ovis aries]
Length = 998
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|397522975|ref|XP_003831522.1| PREDICTED: semaphorin-6D isoform 3 [Pan paniscus]
gi|397522977|ref|XP_003831523.1| PREDICTED: semaphorin-6D isoform 4 [Pan paniscus]
Length = 1011
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIMQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|149691987|ref|XP_001502466.1| PREDICTED: semaphorin-6D isoform 2 [Equus caballus]
Length = 1011
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|149691977|ref|XP_001502464.1| PREDICTED: semaphorin-6D isoform 1 [Equus caballus]
Length = 1073
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|410961299|ref|XP_003987221.1| PREDICTED: semaphorin-6D isoform 6 [Felis catus]
Length = 998
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHRNYTVIFVGS 443
>gi|410961291|ref|XP_003987217.1| PREDICTED: semaphorin-6D isoform 2 [Felis catus]
Length = 1011
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHRNYTVIFVGS 443
>gi|397522971|ref|XP_003831520.1| PREDICTED: semaphorin-6D isoform 1 [Pan paniscus]
gi|397522973|ref|XP_003831521.1| PREDICTED: semaphorin-6D isoform 2 [Pan paniscus]
Length = 1073
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIMQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|114656848|ref|XP_001164888.1| PREDICTED: semaphorin-6D isoform 9 [Pan troglodytes]
Length = 998
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|157820913|ref|NP_001101238.1| semaphorin-6D precursor [Rattus norvegicus]
gi|149023159|gb|EDL80053.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 990
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 140/227 (61%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 199 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 258
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 259 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 317
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 318 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLSFIKSHPL 377
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + ++V + G Y V F +
Sbjct: 378 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGS 422
>gi|410961293|ref|XP_003987218.1| PREDICTED: semaphorin-6D isoform 3 [Felis catus]
Length = 1017
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHRNYTVIFVGS 443
>gi|410961289|ref|XP_003987216.1| PREDICTED: semaphorin-6D isoform 1 [Felis catus]
gi|410961295|ref|XP_003987219.1| PREDICTED: semaphorin-6D isoform 4 [Felis catus]
Length = 1073
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHRNYTVIFVGS 443
>gi|109080999|ref|XP_001112417.1| PREDICTED: semaphorin-6D-like isoform 6 [Macaca mulatta]
gi|387273427|gb|AFJ70208.1| semaphorin-6D isoform 2 precursor [Macaca mulatta]
Length = 998
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|194206688|ref|XP_001502498.2| PREDICTED: semaphorin-6D isoform 6 [Equus caballus]
Length = 998
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|402874223|ref|XP_003900942.1| PREDICTED: semaphorin-6D isoform 3 [Papio anubis]
Length = 998
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|397522981|ref|XP_003831525.1| PREDICTED: semaphorin-6D isoform 6 [Pan paniscus]
Length = 1017
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIMQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|332235465|ref|XP_003266924.1| PREDICTED: semaphorin-6D isoform 3 [Nomascus leucogenys]
Length = 998
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|296213928|ref|XP_002753477.1| PREDICTED: semaphorin-6D isoform 5 [Callithrix jacchus]
gi|296213930|ref|XP_002753478.1| PREDICTED: semaphorin-6D isoform 6 [Callithrix jacchus]
Length = 1011
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGVAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAITVD----HSAGPYQNYTVIFVGS 443
>gi|338716988|ref|XP_003363560.1| PREDICTED: semaphorin-6D [Equus caballus]
Length = 1017
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|114656844|ref|XP_001164625.1| PREDICTED: semaphorin-6D isoform 3 [Pan troglodytes]
gi|114656846|ref|XP_001164924.1| PREDICTED: semaphorin-6D isoform 10 [Pan troglodytes]
Length = 1011
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|426378977|ref|XP_004056184.1| PREDICTED: semaphorin-6D isoform 2 [Gorilla gorilla gorilla]
Length = 998
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|114656840|ref|XP_523068.2| PREDICTED: semaphorin-6D isoform 11 [Pan troglodytes]
gi|332844075|ref|XP_003314766.1| PREDICTED: semaphorin-6D [Pan troglodytes]
gi|410299638|gb|JAA28419.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299640|gb|JAA28420.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299642|gb|JAA28421.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410299644|gb|JAA28422.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410348812|gb|JAA41010.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
gi|410348816|gb|JAA41012.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
Length = 1073
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|109080995|ref|XP_001112381.1| PREDICTED: semaphorin-6D-like isoform 5 [Macaca mulatta]
gi|109080997|ref|XP_001112444.1| PREDICTED: semaphorin-6D-like isoform 7 [Macaca mulatta]
Length = 1011
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|332235461|ref|XP_003266922.1| PREDICTED: semaphorin-6D isoform 1 [Nomascus leucogenys]
Length = 1073
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|296213924|ref|XP_002753475.1| PREDICTED: semaphorin-6D isoform 3 [Callithrix jacchus]
Length = 1073
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGVAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAITVD----HSAGPYQNYTVIFVGS 443
>gi|332235467|ref|XP_003266925.1| PREDICTED: semaphorin-6D isoform 4 [Nomascus leucogenys]
Length = 1017
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|380787867|gb|AFE65809.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 1073
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|296213926|ref|XP_002753476.1| PREDICTED: semaphorin-6D isoform 4 [Callithrix jacchus]
Length = 1017
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 149/252 (59%), Gaps = 21/252 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGVAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR 260
MD AV ++P F + + + T + VD G Y V F + V +KV
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAITVD----HSAGPYQNYTVIFVGSEA--GVVLKVL 452
Query: 261 LLQDVSNTSDSI 272
+ +DSI
Sbjct: 453 AKTSPFSLNDSI 464
>gi|14133251|dbj|BAA96003.2| KIAA1479 protein [Homo sapiens]
Length = 1022
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 231 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 290
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 291 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 349
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 350 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 409
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 410 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 454
>gi|332235463|ref|XP_003266923.1| PREDICTED: semaphorin-6D isoform 2 [Nomascus leucogenys]
Length = 1011
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|109080991|ref|XP_001112236.1| PREDICTED: semaphorin-6D-like isoform 3 [Macaca mulatta]
gi|297296357|ref|XP_002804803.1| PREDICTED: semaphorin-6D-like [Macaca mulatta]
Length = 1073
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|426378981|ref|XP_004056186.1| PREDICTED: semaphorin-6D isoform 4 [Gorilla gorilla gorilla]
gi|426378983|ref|XP_004056187.1| PREDICTED: semaphorin-6D isoform 5 [Gorilla gorilla gorilla]
Length = 1073
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|380816706|gb|AFE80227.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 1086
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|301604253|ref|XP_002931763.1| PREDICTED: semaphorin-6A-like [Xenopus (Silurana) tropicalis]
Length = 1025
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G ++FF+RE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVHAVDYGDLIYFFYREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMADIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + + LPD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSATVERITKSNELPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P+F R
Sbjct: 398 MDEAVPSVINRPLFLR 413
>gi|426378975|ref|XP_004056183.1| PREDICTED: semaphorin-6D isoform 1 [Gorilla gorilla gorilla]
gi|426378979|ref|XP_004056185.1| PREDICTED: semaphorin-6D isoform 3 [Gorilla gorilla gorilla]
Length = 1011
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|380787737|gb|AFE65744.1| semaphorin-6D isoform 3 precursor [Macaca mulatta]
Length = 1017
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|114656842|ref|XP_001164699.1| PREDICTED: semaphorin-6D isoform 4 [Pan troglodytes]
Length = 1017
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|348572239|ref|XP_003471901.1| PREDICTED: semaphorin-6D-like isoform 5 [Cavia porcellus]
Length = 1017
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 21/237 (8%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLD 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIEFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
FI+SHPLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 391 AFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|426378985|ref|XP_004056188.1| PREDICTED: semaphorin-6D isoform 6 [Gorilla gorilla gorilla]
Length = 1017
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|402874219|ref|XP_003900940.1| PREDICTED: semaphorin-6D isoform 1 [Papio anubis]
gi|402874221|ref|XP_003900941.1| PREDICTED: semaphorin-6D isoform 2 [Papio anubis]
Length = 1011
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|326926617|ref|XP_003209495.1| PREDICTED: semaphorin-6D-like isoform 2 [Meleagris gallopavo]
Length = 1016
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HAAGPHQNYTVIFVGS 443
>gi|24234741|ref|NP_705871.1| semaphorin-6D isoform 4 precursor [Homo sapiens]
gi|74715611|sp|Q8NFY4.1|SEM6D_HUMAN RecName: Full=Semaphorin-6D; Flags: Precursor
gi|21634825|gb|AAM69452.1|AF389429_1 semaphorin 6D isoform 4 [Homo sapiens]
Length = 1073
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|403274353|ref|XP_003928944.1| PREDICTED: semaphorin-6D isoform 4 [Saimiri boliviensis
boliviensis]
Length = 998
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAVAVD----HSAGPYQNYTVIFVGS 443
>gi|197102440|ref|NP_001126349.1| semaphorin-6D precursor [Pongo abelii]
gi|75041404|sp|Q5R7F5.1|SEM6D_PONAB RecName: Full=Semaphorin-6D; Flags: Precursor
gi|55731182|emb|CAH92305.1| hypothetical protein [Pongo abelii]
Length = 1017
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|24234735|ref|NP_705869.1| semaphorin-6D isoform 2 precursor [Homo sapiens]
gi|21634821|gb|AAM69450.1|AF389427_1 semaphorin 6D isoform 2 [Homo sapiens]
Length = 998
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|40385875|ref|NP_954708.1| semaphorin-6D isoform 2 precursor [Mus musculus]
gi|38173713|gb|AAH60680.1| Sema6d protein [Mus musculus]
gi|40217483|dbj|BAD05169.1| semaphorin 6D-2 [Mus musculus]
gi|148696176|gb|EDL28123.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_e [Mus musculus]
Length = 998
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V + G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|109080993|ref|XP_001112343.1| PREDICTED: semaphorin-6D-like isoform 4 [Macaca mulatta]
Length = 1017
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|24234729|ref|NP_065909.1| semaphorin-6D isoform 1 precursor [Homo sapiens]
gi|312222667|ref|NP_001185928.1| semaphorin-6D isoform 1 precursor [Homo sapiens]
gi|21634827|gb|AAM69453.1|AF389430_1 semaphorin 6D isoform 1 [Homo sapiens]
gi|152012525|gb|AAI50254.1| SEMA6D protein [Homo sapiens]
gi|168270568|dbj|BAG10077.1| semaphorin-6D precursor [synthetic construct]
Length = 1011
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|359323445|ref|XP_003640102.1| PREDICTED: semaphorin-6D-like isoform 5 [Canis lupus familiaris]
Length = 597
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 167/299 (55%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR 260
MD AV ++P F + + + T + VD G Y V F + + V +
Sbjct: 399 MDAAVPPIADEPWFTKTRIRYRLTAIAVD----HTAGPHQNYTVIFVGSEAGVVLKVLAK 454
Query: 261 ----------LLQDVSNTSDSICESSVGRLKQTVTWG-----QSVHL---SCFVKLPAS 301
LL+++ + + C + ++ ++ +V++ SC ++LP S
Sbjct: 455 TSPFSLNDSVLLEEIEAYNQAKCNAENEEDRRVISLQLDKDHHAVYVAFSSCVIRLPLS 513
>gi|40385877|ref|NP_954710.1| semaphorin-6D isoform 6 precursor [Mus musculus]
gi|40217487|dbj|BAD05171.1| semaphorin 6D-6 [Mus musculus]
Length = 1054
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V + G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|334321145|ref|XP_003340096.1| PREDICTED: semaphorin-6D isoform 2 [Monodelphis domestica]
Length = 1008
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HSAGPHQNYTVIFLGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ Q H SC +++P S
Sbjct: 455 TNPFSLNDSVLLEEIDAYNHAKCNAESEEDRKVISLQLDQDHHALYVAFSSCVIRIPLS 513
>gi|326926619|ref|XP_003209496.1| PREDICTED: semaphorin-6D-like isoform 3 [Meleagris gallopavo]
Length = 1003
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HAAGPHQNYTVIFVGS 443
>gi|348572233|ref|XP_003471898.1| PREDICTED: semaphorin-6D-like isoform 2 [Cavia porcellus]
Length = 1011
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 21/237 (8%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLD 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIEFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
FI+SHPLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 391 AFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|334321147|ref|XP_003340097.1| PREDICTED: semaphorin-6D isoform 3 [Monodelphis domestica]
Length = 995
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HSAGPHQNYTVIFLGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ Q H SC +++P S
Sbjct: 455 TNPFSLNDSVLLEEIDAYNHAKCNAESEEDRKVISLQLDQDHHALYVAFSSCVIRIPLS 513
>gi|326926615|ref|XP_003209494.1| PREDICTED: semaphorin-6D-like isoform 1 [Meleagris gallopavo]
Length = 1078
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HAAGPHQNYTVIFVGS 443
>gi|403274349|ref|XP_003928942.1| PREDICTED: semaphorin-6D isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1011
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + V V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAVAVDHSA--GPYQNYTVIFVGS 443
>gi|403274355|ref|XP_003928945.1| PREDICTED: semaphorin-6D isoform 5 [Saimiri boliviensis
boliviensis]
Length = 1017
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAVAVD----HSAGPYQNYTVIFVGS 443
>gi|449471083|ref|XP_004176943.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6D [Taeniopygia guttata]
Length = 1081
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNTLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGVPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSVTEEPWFTKTRVRYRLTAIAVD----HAAGPYQNYTVIFVGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
R LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 455 TRPFSLNDSILLEEIEAYNHAKCNAESEEDRRVISLQLDRDHHALFVAFSSCVVRIPLS 513
>gi|348572237|ref|XP_003471900.1| PREDICTED: semaphorin-6D-like isoform 4 [Cavia porcellus]
Length = 990
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 21/237 (8%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 191 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLD 250
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 251 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIPGSAVCA 309
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + PD L
Sbjct: 310 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIEFPDETL 369
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
FI+SHPLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 370 AFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HTAGPHQNYTVIFVGS 422
>gi|28972762|dbj|BAC65797.1| mKIAA1479 protein [Mus musculus]
Length = 1009
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 231 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 290
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 291 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 349
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 350 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 409
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + ++V + G Y V F +
Sbjct: 410 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGS 454
>gi|158261087|dbj|BAF82721.1| unnamed protein product [Homo sapiens]
Length = 1073
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|40385871|ref|NP_954709.1| semaphorin-6D isoform 5 precursor [Mus musculus]
gi|40217485|dbj|BAD05170.1| semaphorin 6D-5 [Mus musculus]
gi|148696171|gb|EDL28118.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_a [Mus musculus]
Length = 1030
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V + G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|403274347|ref|XP_003928941.1| PREDICTED: semaphorin-6D isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274351|ref|XP_003928943.1| PREDICTED: semaphorin-6D isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1073
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VIGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + V V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAVAVDHSA--GPYQNYTVIFVGS 443
>gi|40385869|ref|NP_766125.2| semaphorin-6D isoform 1 precursor [Mus musculus]
gi|60729698|pir||JC8059 semaphorin 6D-1 - mouse
gi|40217481|dbj|BAD05168.1| semaphorin 6D-1 [Mus musculus]
gi|148696173|gb|EDL28120.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_c [Mus musculus]
Length = 1011
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVKVR 260
MD AV ++P F + + + ++V + G Y V F + + V K
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|348572235|ref|XP_003471899.1| PREDICTED: semaphorin-6D-like isoform 3 [Cavia porcellus]
Length = 998
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 21/237 (8%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLD 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIEFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
FI+SHPLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 391 AFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|328704964|ref|XP_001945557.2| PREDICTED: semaphorin-5B-like [Acyrthosiphon pisum]
Length = 1039
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 136/218 (62%), Gaps = 15/218 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS++ YV+F FRE+AVEYINCGK V+SR+AR+CK D GG+ +L NW T++KA
Sbjct: 201 EPQFVGSFETDAYVYFLFRESAVEYINCGKRVYSRIARMCKNDVGGQTMLRDNWTTFIKA 260
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS+PG++PFYF+EIQ + +P D+ Y FTT + G+ GSA+CSF++ I AF G
Sbjct: 261 RLNCSLPGDYPFYFDEIQGMTYLP-DEGLVYATFTTPSNGIAGSAVCSFNLTAINAAFNG 319
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---GQCVNDTETLPDSVLNFIRSHPLMDEAVAHRD 211
FK QA+ S W+ R P G C P+ +L+ R + LMD AV
Sbjct: 320 PFKHQASVGSEWI-----RYNPPHQLNHGHCQRQD---PNQILDSSR-YQLMDNAVQPTT 370
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
P++Y+ + TH+ VDVV + G+ ++Y A T
Sbjct: 371 MDPLYYKPLEILTHIAVDVVPTKPHGSLK--VLYVATT 406
>gi|24234738|ref|NP_705870.1| semaphorin-6D isoform 3 precursor [Homo sapiens]
gi|21634823|gb|AAM69451.1|AF389428_1 semaphorin 6D isoform 3 [Homo sapiens]
Length = 1017
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|348572231|ref|XP_003471897.1| PREDICTED: semaphorin-6D-like isoform 1 [Cavia porcellus]
Length = 1073
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 21/237 (8%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLD 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIEFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
FI+SHPLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 391 AFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HTAGPHQNYTVIFVGS 443
>gi|326926621|ref|XP_003209497.1| PREDICTED: semaphorin-6D-like isoform 4 [Meleagris gallopavo]
Length = 1022
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNIGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV +P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HAAGPHQNYTVIFVGS 443
>gi|410947977|ref|XP_003980718.1| PREDICTED: semaphorin-6A [Felis catus]
Length = 1030
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSVINRPWFLR 413
>gi|40385879|ref|NP_954711.1| semaphorin-6D isoform 4 precursor [Mus musculus]
gi|81894127|sp|Q76KF0.1|SEM6D_MOUSE RecName: Full=Semaphorin-6D; Flags: Precursor
gi|40217489|dbj|BAD05172.1| Semaphorin 6D-4 [Mus musculus]
gi|148696175|gb|EDL28122.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_d [Mus musculus]
Length = 1073
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + ++V + G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGS 443
>gi|311249995|ref|XP_003123902.1| PREDICTED: semaphorin-6A isoform 1 [Sus scrofa]
gi|335283359|ref|XP_003354294.1| PREDICTED: semaphorin-6A isoform 2 [Sus scrofa]
Length = 1030
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|334321149|ref|XP_003340098.1| PREDICTED: semaphorin-6D isoform 4 [Monodelphis domestica]
Length = 1014
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HSAGPHQNYTVIFLGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ Q H SC +++P S
Sbjct: 455 TNPFSLNDSVLLEEIDAYNHAKCNAESEEDRKVISLQLDQDHHALYVAFSSCVIRIPLS 513
>gi|148678007|gb|EDL09954.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_a [Mus musculus]
Length = 1005
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|114656858|ref|XP_001164546.1| PREDICTED: semaphorin-6D isoform 1 [Pan troglodytes]
Length = 597
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|38566246|gb|AAH62979.1| Sema6a protein [Mus musculus]
Length = 976
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|449514948|ref|XP_004174294.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6A [Taeniopygia guttata]
Length = 1027
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 131/229 (57%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQSVTDVIHFNGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYVTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MDEAV N+P F R + + T + VD G Y V F +
Sbjct: 398 MDEAVPSIVNRPWFLRTMVRYRLTKIAVD----SAAGPYQNYTVVFLGS 442
>gi|2623162|gb|AAB86408.1| semaphorin VIa [Mus musculus]
Length = 888
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIINRPWFLR 413
>gi|426233374|ref|XP_004010692.1| PREDICTED: semaphorin-6D isoform 5 [Ovis aries]
Length = 597
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHQNYTVIFVGS 443
>gi|410348814|gb|JAA41011.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Pan troglodytes]
Length = 476
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQISGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYR 218
MD AV ++P F +
Sbjct: 399 MDSAVPPIADEPWFTK 414
>gi|126278227|ref|XP_001380368.1| PREDICTED: semaphorin-6D isoform 1 [Monodelphis domestica]
Length = 1070
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 164/299 (54%), Gaps = 37/299 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTT--LRTVFVK 258
MD AV +P F + + + T + VD G Y V F + + + K
Sbjct: 399 MDSAVPSIIEEPWFTKTRVRYRLTAIAVD----HSAGPHQNYTVIFLGSEAGVVLKILAK 454
Query: 259 VR--------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ Q H SC +++P S
Sbjct: 455 TNPFSLNDSVLLEEIDAYNHAKCNAESEEDRKVISLQLDQDHHALYVAFSSCVIRIPLS 513
>gi|395503195|ref|XP_003755957.1| PREDICTED: semaphorin-6D-like [Sarcophilus harrisii]
Length = 1198
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 169/296 (57%), Gaps = 31/296 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 352 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 411
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 412 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 470
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 471 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 530
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV-----QYEV--FGTTSEYIVYFAATTTLR 253
MD AV +P F + + + T + VD Y V G+ + ++ A T+
Sbjct: 531 MDSAVPSIIEEPWFTKTRVRYRLTSIAVDHSAGPHQNYTVIFLGSEAGVVLKILAKTSPF 590
Query: 254 TVFVKVRLLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
++ V LL+++ + + C ES R ++ Q H SC +++P S
Sbjct: 591 SLNDSV-LLEEIDAFNHAKCNAESEEDRKVISLQLDQDHHALYVAFSSCIIRIPLS 645
>gi|395822129|ref|XP_003784376.1| PREDICTED: semaphorin-6D isoform 3 [Otolemur garnettii]
Length = 998
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS+ DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMNDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHDLAEGYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----RSAGPYQNYTVIFVGS 443
>gi|432114662|gb|ELK36501.1| Semaphorin-6A [Myotis davidii]
Length = 1008
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 198 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 257
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 258 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 316
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 317 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNDFPDDTLNFIKTHPL 376
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 377 MDEAVPSVINRPWFLRTMVRYRLTKIAVDTA 407
>gi|67846119|ref|NP_061214.2| semaphorin-6A precursor [Mus musculus]
gi|56405301|sp|O35464.2|SEM6A_MOUSE RecName: Full=Semaphorin-6A; AltName: Full=Semaphorin Q; Short=Sema
Q; AltName: Full=Semaphorin VIA; Short=Sema VIA;
AltName: Full=Semaphorin-6A-1; Short=SEMA6A-1; Flags:
Precursor
gi|37748387|gb|AAH59238.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [Mus musculus]
gi|148678009|gb|EDL09956.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_c [Mus musculus]
Length = 1031
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|348575101|ref|XP_003473328.1| PREDICTED: semaphorin-6A-like [Cavia porcellus]
Length = 1030
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPAIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|392334157|ref|XP_003753094.1| PREDICTED: semaphorin-6A [Rattus norvegicus]
gi|392354691|ref|XP_003751830.1| PREDICTED: semaphorin-6A [Rattus norvegicus]
Length = 1048
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|348541539|ref|XP_003458244.1| PREDICTED: semaphorin-6D-like [Oreochromis niloticus]
Length = 1047
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 144/255 (56%), Gaps = 27/255 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FF+RE AVE+ N GK V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 226 EPHFLHAAEYGNYVYFFYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVK 285
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
ARLNCS+PGE FYF+ +Q DI VP GVFTT + GSA+C+FS+ D
Sbjct: 286 ARLNCSVPGESFFYFDVLQSITDIIDINGVP----SVVGVFTTQMNSIPGSAVCAFSMAD 341
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRS 199
IE+ F+G+FKEQ T S W P ++P+PRPG C PD L FI+S
Sbjct: 342 IEKVFLGRFKEQKTPDSVWTPFPEEKLPKPRPGSCAGHGPAASFKSSVEFPDDTLQFIKS 401
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV 257
HPLMD AV ++P F + + + T L VD G Y V F + V +
Sbjct: 402 HPLMDTAVPSIGDEPWFTKTRVRYRLTALAVD----SEAGPHKNYTVVFIGAES--GVVL 455
Query: 258 KVRLLQDVSNTSDSI 272
KV + +DS+
Sbjct: 456 KVLAKTSTVSLNDSL 470
>gi|410961297|ref|XP_003987220.1| PREDICTED: semaphorin-6D isoform 5 [Felis catus]
Length = 597
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPHRNYTVIFVGS 443
>gi|395822125|ref|XP_003784374.1| PREDICTED: semaphorin-6D isoform 1 [Otolemur garnettii]
Length = 1073
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS+ DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMNDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHDLAEGYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----RSAGPYQNYTVIFVGS 443
>gi|149064211|gb|EDM14414.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1031
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|395822131|ref|XP_003784377.1| PREDICTED: semaphorin-6D isoform 4 [Otolemur garnettii]
Length = 1017
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS+ DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMNDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHDLAEGYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----RSAGPYQNYTVIFVGS 443
>gi|332235469|ref|XP_003266926.1| PREDICTED: semaphorin-6D isoform 5 [Nomascus leucogenys]
Length = 597
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|395822127|ref|XP_003784375.1| PREDICTED: semaphorin-6D isoform 2 [Otolemur garnettii]
Length = 1011
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS+ DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMNDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHDLAEGYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----RSAGPYQNYTVIFVGS 443
>gi|338716990|ref|XP_003363561.1| PREDICTED: semaphorin-6D [Equus caballus]
Length = 597
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|24234744|ref|NP_705872.1| semaphorin-6D isoform 5 precursor [Homo sapiens]
Length = 597
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>gi|118104558|ref|XP_424960.2| PREDICTED: semaphorin-6A isoform 2 [Gallus gallus]
Length = 1027
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 131/229 (57%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHFNGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYATSSEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MDEAV N+P F R + + T + VD G Y V F +
Sbjct: 398 MDEAVPSIVNRPWFLRTMVRYRLTKITVD----SAAGPYKNYTVVFLGS 442
>gi|402874225|ref|XP_003900943.1| PREDICTED: semaphorin-6D isoform 4 [Papio anubis]
Length = 597
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|114601256|ref|XP_001151109.1| PREDICTED: semaphorin-6A isoform 8 [Pan troglodytes]
gi|114601258|ref|XP_001151177.1| PREDICTED: semaphorin-6A isoform 9 [Pan troglodytes]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|148696172|gb|EDL28119.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_b [Mus musculus]
gi|148696174|gb|EDL28121.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_b [Mus musculus]
Length = 595
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 164/297 (55%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR-- 260
MD AV ++P F + + + ++V + G Y V F + + V +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|426378987|ref|XP_004056189.1| PREDICTED: semaphorin-6D isoform 7 [Gorilla gorilla gorilla]
Length = 597
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>gi|397512878|ref|XP_003826763.1| PREDICTED: semaphorin-6A isoform 1 [Pan paniscus]
gi|397512880|ref|XP_003826764.1| PREDICTED: semaphorin-6A isoform 2 [Pan paniscus]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|11991660|ref|NP_065847.1| semaphorin-6A precursor [Homo sapiens]
gi|11093651|gb|AAG29378.1|AF279656_1 semaphorin SEMA6A1 [Homo sapiens]
gi|119569323|gb|EAW48938.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_e [Homo sapiens]
gi|162317994|gb|AAI56174.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [synthetic construct]
gi|225000208|gb|AAI72468.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A [synthetic construct]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|363744772|ref|XP_003643120.1| PREDICTED: semaphorin-6A isoform 1 [Gallus gallus]
Length = 1044
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 131/229 (57%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHFNGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYATSSEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MDEAV N+P F R + + T + VD G Y V F +
Sbjct: 398 MDEAVPSIVNRPWFLRTMVRYRLTKITVD----SAAGPYKNYTVVFLGS 442
>gi|296452903|sp|Q9H2E6.2|SEM6A_HUMAN RecName: Full=Semaphorin-6A; AltName: Full=Semaphorin VIA;
Short=Sema VIA; AltName: Full=Semaphorin-6A-1;
Short=SEMA6A-1; Flags: Precursor
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|119569322|gb|EAW48937.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_d [Homo sapiens]
gi|168269834|dbj|BAG10044.1| semaphorin-6A precursor [synthetic construct]
Length = 1047
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|380787929|gb|AFE65840.1| semaphorin-6D isoform 4 precursor [Macaca mulatta]
Length = 476
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYR 218
MD AV ++P F +
Sbjct: 399 MDSAVPPIADEPWFTK 414
>gi|134085188|emb|CAM60074.1| si:ch211-278n20.1 [Danio rerio]
Length = 659
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 163/298 (54%), Gaps = 35/298 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + D G +V+FFFRE A E+ N GK+V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 222 EPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
ARLNCS+PGE FYF+ +Q DI VP GVFTT + GSA+C+FS+ D
Sbjct: 282 ARLNCSVPGESFFYFDVLQAITDIIDINGVP----SVVGVFTTQLNSIPGSAVCAFSMVD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRS 199
IE+AF G+FKEQ T S W P ++P+PRPG C PD L FI+S
Sbjct: 338 IEKAFRGRFKEQKTPDSVWTPFPEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKS 397
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVV-----QYEV--FGTTSEYIVYFAATT 250
HPLMD +V ++P F + + + T L VD Y V G+ + ++ A T
Sbjct: 398 HPLMDASVPSIGDEPWFTKTRVRYRLTALAVDNTAGPHKNYTVVFIGSEAGIVLKVLAKT 457
Query: 251 TLRTVFVKVRLLQ-DVSNTSDSICESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
+L ++ V L + DV N + + + R + + H SC V++P S
Sbjct: 458 SLLSLNDSVLLEEIDVFNQAKCLSSNEDDRRILSFHLDKDSHTLYVAFSSCVVRIPLS 515
>gi|189054769|dbj|BAG37591.1| unnamed protein product [Homo sapiens]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|119569319|gb|EAW48934.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_a [Homo sapiens]
Length = 975
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|332221523|ref|XP_003259911.1| PREDICTED: semaphorin-6A isoform 1 [Nomascus leucogenys]
gi|332221525|ref|XP_003259912.1| PREDICTED: semaphorin-6A isoform 2 [Nomascus leucogenys]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|395831729|ref|XP_003788945.1| PREDICTED: semaphorin-6A [Otolemur garnettii]
Length = 1029
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSTLEKYTSSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|426349706|ref|XP_004042431.1| PREDICTED: semaphorin-6A isoform 1 [Gorilla gorilla gorilla]
gi|426349708|ref|XP_004042432.1| PREDICTED: semaphorin-6A isoform 2 [Gorilla gorilla gorilla]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|73970497|ref|XP_858843.1| PREDICTED: semaphorin-6A isoform 2 [Canis lupus familiaris]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSVINRPWFLRTMVRYRLTKIAVDTA 428
>gi|449280199|gb|EMC87549.1| Semaphorin-6A [Columba livia]
Length = 1044
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHFNGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYVTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIVNRPWFLR 413
>gi|7243117|dbj|BAA92606.1| KIAA1368 protein [Homo sapiens]
Length = 1049
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 221 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 280
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 281 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 339
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 340 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 399
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 400 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 430
>gi|24234732|ref|NP_079242.2| semaphorin-6D isoform 6 precursor [Homo sapiens]
gi|21634819|gb|AAM69449.1|AF389426_1 semaphorin 6D short isoform [Homo sapiens]
gi|119597738|gb|EAW77332.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D, isoform CRA_a [Homo sapiens]
Length = 476
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 13/194 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVF 216
MD AV ++P F
Sbjct: 399 MDSAVPPIADEPWF 412
>gi|402872314|ref|XP_003900066.1| PREDICTED: semaphorin-6A isoform 1 [Papio anubis]
gi|402872316|ref|XP_003900067.1| PREDICTED: semaphorin-6A isoform 2 [Papio anubis]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|380788371|gb|AFE66061.1| semaphorin-6A precursor [Macaca mulatta]
Length = 1030
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|11093909|gb|AAG29494.1|AF288666_1 axon guidance signal SEMA6A1 [Mus musculus]
Length = 1005
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAD 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>gi|327276651|ref|XP_003223081.1| PREDICTED: semaphorin-6A-like [Anolis carolinensis]
Length = 1026
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK +F RVARVCK D GG + +L + W ++LK
Sbjct: 219 EPYFVHAVDYGNYIYFFFREIAVEYHSMGKVIFPRVARVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G + F+T + GSA+C++ I DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVVHINGRNI-VLATFSTPYNSIPGSAVCAYDILDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++H L
Sbjct: 338 VFTGRFKEQKSPDSIWTPVPDERVPKPRPGSCAGSTLLEKYTSSNEFPDDTLNFIKTHSL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV NKP F R
Sbjct: 398 MDEAVPSIVNKPWFLR 413
>gi|291403082|ref|XP_002717923.1| PREDICTED: semaphorin 6D isoform 5 [Oryctolagus cuniculus]
Length = 998
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYRTSIDFPDETLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + +D G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAID----RSAGPYQNYTVIFVGS 443
>gi|134085184|emb|CAM60072.1| si:ch211-278n20.1 [Danio rerio]
Length = 588
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 163/298 (54%), Gaps = 35/298 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + D G +V+FFFRE A E+ N GK+V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 222 EPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
ARLNCS+PGE FYF+ +Q DI VP GVFTT + GSA+C+FS+ D
Sbjct: 282 ARLNCSVPGESFFYFDVLQAITDIIDINGVP----SVVGVFTTQLNSIPGSAVCAFSMVD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRS 199
IE+AF G+FKEQ T S W P ++P+PRPG C PD L FI+S
Sbjct: 338 IEKAFRGRFKEQKTPDSVWTPFPEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKS 397
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVV-----QYEV--FGTTSEYIVYFAATT 250
HPLMD +V ++P F + + + T L VD Y V G+ + ++ A T
Sbjct: 398 HPLMDASVPSIGDEPWFTKTRVRYRLTALAVDNTAGPHKNYTVVFIGSEAGIVLKVLAKT 457
Query: 251 TLRTVFVKVRLLQ-DVSNTSDSICESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
+L ++ V L + DV N + + + R + + H SC V++P S
Sbjct: 458 SLLSLNDSVLLEEIDVFNQAKCLSSNEDDRRILSFHLDKDSHTLYVAFSSCVVRIPLS 515
>gi|355750119|gb|EHH54457.1| hypothetical protein EGM_15305 [Macaca fascicularis]
Length = 1052
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIFNRPWFLR 413
>gi|351706619|gb|EHB09538.1| Semaphorin-6A [Heterocephalus glaber]
Length = 1046
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK +F RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVIFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYVTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPAIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|355691534|gb|EHH26719.1| hypothetical protein EGK_16770 [Macaca mulatta]
Length = 1052
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIFNRPWFLR 413
>gi|297294887|ref|XP_002804530.1| PREDICTED: semaphorin-6A-like [Macaca mulatta]
Length = 971
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIFNRPWFLR 413
>gi|291403076|ref|XP_002717920.1| PREDICTED: semaphorin 6D isoform 2 [Oryctolagus cuniculus]
Length = 1054
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYRTSIDFPDETLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + +D G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAID----RSAGPYQNYTVIFVGS 443
>gi|260825397|ref|XP_002607653.1| hypothetical protein BRAFLDRAFT_84658 [Branchiostoma floridae]
gi|229293001|gb|EEN63663.1| hypothetical protein BRAFLDRAFT_84658 [Branchiostoma floridae]
Length = 1096
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 136/221 (61%), Gaps = 24/221 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SY+IG +++FFFRETA E NCGK+VFSRVAR+CK D GG +L +NW T++KA
Sbjct: 264 EPNFVSSYEIGDFIYFFFRETAAENENCGKTVFSRVARICKNDIGGHFLLEENWTTFMKA 323
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PG+FPFY+NE+Q Y P ++ YGVF+T G+ GSA+C++++ IE F G
Sbjct: 324 RLNCSRPGQFPFYYNELQATYYNPAEEI-VYGVFSTEENGIAGSAVCAYNLSSIEEVFNG 382
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
F+ + S SAWL P P + +L D++ + LMD+AV + P
Sbjct: 383 SFRYKPNSKSAWL-------TSPNPNSNFQTSRSLEDAM-----KYQLMDQAVPPSHHNP 430
Query: 215 VFYRRDLLFTHLVVDVV--QYEVF---------GTTSEYIV 244
+ + F+H+VVD + + EVF GT +YIV
Sbjct: 431 LVQQEYDRFSHIVVDRIRGRREVFSVMFVATVSGTIRKYIV 471
>gi|291403074|ref|XP_002717919.1| PREDICTED: semaphorin 6D isoform 1 [Oryctolagus cuniculus]
Length = 1073
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYRTSIDFPDETLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + +D G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAID----RSAGPYQNYTVIFVGS 443
>gi|119569320|gb|EAW48935.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6A, isoform CRA_b [Homo sapiens]
Length = 971
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIFNRPWFLR 413
>gi|10432890|dbj|BAB13869.1| unnamed protein product [Homo sapiens]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 129/196 (65%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 111 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 170
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 171 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 229
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 230 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 289
Query: 203 MDEAVAHRDNKPVFYR 218
MD AV ++P F +
Sbjct: 290 MDSAVPPIADEPWFTK 305
>gi|339248595|ref|XP_003373285.1| semaphorin-1A [Trichinella spiralis]
gi|316970638|gb|EFV54538.1| semaphorin-1A [Trichinella spiralis]
Length = 600
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 138/238 (57%), Gaps = 13/238 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S D G ++F+FRE A EY NCG +VFSR+ARVCK D G + W TY+KAR
Sbjct: 141 PHFVSSLDDGDSIYFWFREAAAEYNNCGTAVFSRIARVCKSDQGDHKPDADTWTTYIKAR 200
Query: 96 LNCSIPGEFPFYFNEIQD-----IYKVPGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+ G PFYFNEI I + G T+ Y +F T +T L SAIC+FS+ED+
Sbjct: 201 LNCSLSGHVPFYFNEIAATSNLVITERNGKKTELIYAIFNTPSTALRASAICAFSMEDVR 260
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
F G FK Q + +S WLPV S +P PRPG C +++TL + +NF+R H L+ +AV
Sbjct: 261 YIFNNGPFKVQKSPSSLWLPVYKSNLPNPRPGDCQANSKTLGERAVNFVRMHSLLSDAVP 320
Query: 209 HRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQD 264
+ +P+ L FT L VDVVQ V G Y V F T R V V + QD
Sbjct: 321 NYFEQPLVVDTSLGYKFTALAVDVVQ-SVSGF--PYNVLFVGTNDGR-VLKYVNVAQD 374
>gi|126333778|ref|XP_001363795.1| PREDICTED: semaphorin-6A [Monodelphis domestica]
Length = 1028
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMVDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSASLEKYGSSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIVNRPWFLRTMVRYRLTKIAVDTA 428
>gi|345308242|ref|XP_001513097.2| PREDICTED: semaphorin-6A [Ornithorhynchus anatinus]
Length = 982
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSAALEKYGTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSLVNRPWFLR 413
>gi|291403078|ref|XP_002717921.1| PREDICTED: semaphorin 6D isoform 3 [Oryctolagus cuniculus]
Length = 1017
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYRTSIDFPDETLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + +D G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAID----RSAGPYQNYTVIFVGS 443
>gi|291403080|ref|XP_002717922.1| PREDICTED: semaphorin 6D isoform 4 [Oryctolagus cuniculus]
Length = 1030
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYRTSIDFPDETLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + +D G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAID----RSAGPYQNYTVIFVGS 443
>gi|344264903|ref|XP_003404529.1| PREDICTED: semaphorin-6A [Loxodonta africana]
Length = 1030
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFN---EIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN + D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILHAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIINRPWFLR 413
>gi|158148925|dbj|BAF81996.1| Semaphorin 6D-S [Danio rerio]
Length = 999
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 135/232 (58%), Gaps = 25/232 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + D G +V+FFFRE A E+ N GK+V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 222 EPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
ARLNCS+PGE FYF+ +Q DI VP GVFTT + GSA+C+FS+ D
Sbjct: 282 ARLNCSVPGESFFYFDVLQAITDIIDINGVPS----VVGVFTTQLNSIPGSAVCAFSMVD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRS 199
IE+AF G+FKEQ T S W P ++P+PRPG C PD L FI+S
Sbjct: 338 IEKAFRGRFKEQKTPDSVWTPFPEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKS 397
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
HPLMD +V ++P F + + + T L VD G Y V F +
Sbjct: 398 HPLMDASVPSIGDEPWFTKTRVRYRLTALAVD----NTAGPHKNYTVVFIGS 445
>gi|14042854|dbj|BAB55418.1| unnamed protein product [Homo sapiens]
Length = 418
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 158 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 217
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 218 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAS 276
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 277 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 336
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 337 MDEAVPSIFNRPWFLR 352
>gi|26349885|dbj|BAC38582.1| unnamed protein product [Mus musculus]
Length = 587
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIINRPWFLR 413
>gi|403256074|ref|XP_003920724.1| PREDICTED: semaphorin-6A isoform 1 [Saimiri boliviensis
boliviensis]
gi|403256076|ref|XP_003920725.1| PREDICTED: semaphorin-6A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1030
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|308198443|pdb|3AFC|A Chain A, Mouse Semaphorin 6a Extracellular Domain
gi|308198444|pdb|3AFC|B Chain B, Mouse Semaphorin 6a Extracellular Domain
gi|308198475|pdb|3AL8|A Chain A, Plexin A2 SEMAPHORIN 6A COMPLEX
Length = 556
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 205 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 264
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 265 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 323
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 324 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 383
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 384 MDEAVPSIINRPWFLR 399
>gi|26335301|dbj|BAC31351.1| unnamed protein product [Mus musculus]
Length = 605
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIINRPWFLR 413
>gi|308388139|pdb|3OKW|A Chain A, Mouse Semaphorin 6a, Extracellular Domains 1-2
gi|308388140|pdb|3OKW|B Chain B, Mouse Semaphorin 6a, Extracellular Domains 1-2
gi|308388142|pdb|3OKY|B Chain B, Plexin A2 In Complex With Semaphorin 6a
Length = 565
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 204 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 263
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 264 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 322
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 323 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 382
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 383 MDEAVPSIINRPWFLR 398
>gi|158517921|ref|NP_001017682.2| semaphorin-6D precursor [Danio rerio]
gi|158148923|dbj|BAF81995.1| Semaphorin 6D-L [Danio rerio]
Length = 1018
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 135/232 (58%), Gaps = 25/232 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + D G +V+FFFRE A E+ N GK+V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 222 EPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
ARLNCS+PGE FYF+ +Q DI VP GVFTT + GSA+C+FS+ D
Sbjct: 282 ARLNCSVPGESFFYFDVLQAITDIIDINGVPS----VVGVFTTQLNSIPGSAVCAFSMVD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRS 199
IE+AF G+FKEQ T S W P ++P+PRPG C PD L FI+S
Sbjct: 338 IEKAFRGRFKEQKTPDSVWTPFPEEKLPKPRPGCCAGHGSAESYKTSIEFPDETLQFIKS 397
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
HPLMD +V ++P F + + + T L VD G Y V F +
Sbjct: 398 HPLMDASVPSIGDEPWFTKTRVRYRLTALAVD----NTAGPHKNYTVVFIGS 445
>gi|410911406|ref|XP_003969181.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1008
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + D G YV+FF E AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 228 EPHFLHAIDYGNYVYFFLSEMAVEYTALGKVVFSRVARVCKNDNGGSPRVLDRYWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F ++DIE+
Sbjct: 288 ARLNCSVPGDSFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPLM 203
F KFKEQ + +W PV VP+PRPG C D PD +L FI+++PLM
Sbjct: 348 FNRKFKEQRANDLSWTPVAEELVPQPRPGTCAGDGAAAEYKSSVQFPDEMLTFIKTYPLM 407
Query: 204 DEAVAHRDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV------ 255
DEAV + +P F R T +VVDV G T + V F + R +
Sbjct: 408 DEAVPSVNERPCFTRTSSRSKLTQIVVDVSA----GLTKDRTVMFLGSEDGRILKVLAST 463
Query: 256 ----FVKVRLLQDVSNTSDSICE 274
V LL+D+ + S C+
Sbjct: 464 HPNNSVGTELLEDIDVYNPSKCD 486
>gi|301759291|ref|XP_002915496.1| PREDICTED: semaphorin-6A-like [Ailuropoda melanoleuca]
Length = 1030
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK F RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVFFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAH 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSVVNRPWFLR 413
>gi|281341896|gb|EFB17480.1| hypothetical protein PANDA_003489 [Ailuropoda melanoleuca]
Length = 1047
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 126/211 (59%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK F RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVFFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAH 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSVVNRPWFLRTMVRYRLTKIAVDTT 428
>gi|297675811|ref|XP_002815852.1| PREDICTED: semaphorin-6A isoform 2 [Pongo abelii]
gi|297675813|ref|XP_002815853.1| PREDICTED: semaphorin-6A isoform 3 [Pongo abelii]
Length = 1030
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G +++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDFIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>gi|327291087|ref|XP_003230253.1| PREDICTED: semaphorin-6D-like, partial [Anolis carolinensis]
Length = 446
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 31/264 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G YV+ FFRE ++EY G+ VFSRV RVCK D GG +L + W ++LK
Sbjct: 144 EPHFVHALEYGDYVYLFFREISMEYTTLGRVVFSRVGRVCKNDMGGSPRVLEKYWTSFLK 203
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q D+ +V G +GVFTT + + GSA+C+F +++IER
Sbjct: 204 ARLNCSVPGDSFFYFDVLQAVTDVAQVNGR-LAVFGVFTTQSNSITGSAVCAFYMDEIER 262
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPL 202
F GKFKEQ + +AW P+ +VP+PRPG C + PD +L+FI+S PL
Sbjct: 263 VFNGKFKEQKNADAAWTPIPEEKVPKPRPGCCAGIGKASGFRTSNDFPDEMLSFIKSFPL 322
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV-----QYEVF------GTTSEYIVYFAAT 249
+DEAV +P F + + THL VD Y V GT + + A
Sbjct: 323 LDEAVPSVTGQPWFTKTASRYKLTHLAVDTAAGPFKNYTVLFLGSEDGTVLKVLSRTAEN 382
Query: 250 TTLRTVFVKVRLLQDVSNTSDSIC 273
+T+ TV LL ++S + S C
Sbjct: 383 STVETV-----LLDEISVYNPSRC 401
>gi|187607673|ref|NP_001120152.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D precursor [Xenopus (Silurana)
tropicalis]
gi|166797015|gb|AAI59148.1| sema6d protein [Xenopus (Silurana) tropicalis]
Length = 1084
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 165/296 (55%), Gaps = 24/296 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G Y++FFFRE AVE+ N GK+V SRVAR+CK D GG + +L ++W +++K
Sbjct: 220 EPHFLHAIEYGNYIYFFFREIAVEHNNLGKAVHSRVARICKNDLGGSQRVLEKHWTSFVK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+F+++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCAFTMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V RVP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFRGRFKEQKTPDSVWTAVPEDRVPKPRPGCCARHGYGEGYRSSTEFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF-------THLVVDVVQYEVF--GTTSEYIVYFAATTTLR 253
MD A+ +P F + + + HL + Y V G+ + ++ A T
Sbjct: 399 MDSAIPSIIEEPWFTKTRVRYRLTAVAVDHLAGPYLNYTVMFVGSEAGVVLKILAKTNPF 458
Query: 254 TVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSV-HLSCFVKLPASMANQPMS 308
++ V LL+++ + + C + ++ ++ H + FV + P+S
Sbjct: 459 SLNDSV-LLEEIDAYNRAKCSGNSEEDRKVISLQMDRDHHALFVAFSGCIVRLPLS 513
>gi|338713629|ref|XP_001503508.3| PREDICTED: semaphorin-6A-like [Equus caballus]
Length = 718
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVDTA 428
>gi|70912378|ref|NP_998164.2| semaphorin-6C precursor [Danio rerio]
gi|68534777|gb|AAH98887.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D [Danio rerio]
Length = 880
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 143/248 (57%), Gaps = 17/248 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLK 93
+P F+ + + G YV+FFF E AVE+ GK V+SRVARVCK D GG +L ++W ++LK
Sbjct: 216 EPHFLHAVEYGNYVYFFFSEIAVEHTAAGKVVYSRVARVCKNDNGGSTRVLDRHWTSFLK 275
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT T + GSA+C F ++DIER
Sbjct: 276 ARLNCSVPGDTFFYFDVLQSLTNVLQINQRPAVVGVFTTQTNSIPGSAVCGFYLDDIERV 335
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPLM 203
F G+FKEQ S S W V +VP+PRPG C + PDSVL+FI++HPLM
Sbjct: 336 FNGRFKEQKNSDSMWTAVPEEQVPKPRPGSCAGEGSASSYSSSVQFPDSVLSFIKTHPLM 395
Query: 204 DEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRL 261
+E+V +++P+ + T +VVD G V F + R + +
Sbjct: 396 EESVPSVNSQPLITNTASRYKLTQIVVDTAA----GPHKNRTVVFLGSEDGRVLKILTNT 451
Query: 262 LQDVSNTS 269
+ S+TS
Sbjct: 452 HSNSSHTS 459
>gi|390459752|ref|XP_002744722.2| PREDICTED: semaphorin-6A [Callithrix jacchus]
Length = 674
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSSEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 398 MDEAVPSIFNRPWFLR 413
>gi|291387213|ref|XP_002710189.1| PREDICTED: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6A [Oryctolagus cuniculus]
Length = 1021
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 128/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDHGDYIYFFFREMAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRIHGRDV-VLATFSTPYNSIPGSAVCAYDMVDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSSEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV ++P F R + + T + VD
Sbjct: 398 MDEAVPSIIHRPWFLRTMVRYRLTKIAVDTA 428
>gi|345782784|ref|XP_540309.3| PREDICTED: semaphorin-6C [Canis lupus familiaris]
Length = 963
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPYFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q D Y P +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVDFYGHP----ALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T L VD
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQLAVD 429
>gi|301767918|ref|XP_002919370.1| PREDICTED: semaphorin-6C-like [Ailuropoda melanoleuca]
Length = 886
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q D+Y P +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVDLYGRPA----LFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IE F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IEHGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T L VD
Sbjct: 399 HPLLDPAVPPAAHQPLLTLTSRALLTQLAVD 429
>gi|281352880|gb|EFB28464.1| hypothetical protein PANDA_007998 [Ailuropoda melanoleuca]
Length = 879
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q D+Y P +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVDLYGRPA----LFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IE F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IEHGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T L VD
Sbjct: 399 HPLLDPAVPPAAHQPLLTLTSRALLTQLAVD 429
>gi|432851299|ref|XP_004066954.1| PREDICTED: semaphorin-6D-like [Oryzias latipes]
Length = 1047
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 141/248 (56%), Gaps = 23/248 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FF+RE AVE+ N GK V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 225 EPHFLHAAEYGNYVYFFYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVK 284
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
AR NCS+PGE FYF+ +Q DI + G + GVFTT + GSA+C+FS+ DIE+
Sbjct: 285 ARFNCSVPGESFFYFDVLQSITDIININGVPS-VVGVFTTQMNSIPGSAVCAFSMADIEK 343
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ T S W P ++P+PRPG C PD L FI+SHPL
Sbjct: 344 VFWGRFKEQKTPDSVWTPFPEEKLPKPRPGSCAGHGPAASFKSSIEFPDETLQFIKSHPL 403
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF--AATTTLRTVFVK 258
MD AV ++P F + + + T L VD G Y V F A + + V K
Sbjct: 404 MDTAVPSTGDEPWFTKTRVRYRLTALAVD----NEAGPHKNYTVVFIGAESGVILKVLAK 459
Query: 259 VR--LLQD 264
LL D
Sbjct: 460 TSPMLLND 467
>gi|26342458|dbj|BAC34891.1| unnamed protein product [Mus musculus]
Length = 595
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/297 (37%), Positives = 163/297 (54%), Gaps = 33/297 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AV + N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVGHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR-- 260
MD AV ++P F + + + ++V + G Y V F + + V +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEAGVVLKVLAKTS 456
Query: 261 --------LLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
LL+++ + + C ES R ++ + H SC V++P S
Sbjct: 457 PFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLS 513
>gi|359323724|ref|XP_003640174.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Canis lupus
familiaris]
Length = 1459
Score = 183 bits (465), Expect = 1e-43, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 139/226 (61%), Gaps = 12/226 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 608 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 666
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 667 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 725
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G V E L + L + LM EAV
Sbjct: 726 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQPVTP 784
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +TT+
Sbjct: 785 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTTS 830
>gi|432114323|gb|ELK36251.1| Semaphorin-6C [Myotis davidii]
Length = 639
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDTRLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y P +GVF+T T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDAAFYFDVLQALTGPVNLYGRPA----LFGVFSTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ +S AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSSDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D V ++P+ L T + VD
Sbjct: 399 HPLLDPTVPPATHQPLLTLTSRALLTQVAVD 429
>gi|344243083|gb|EGV99186.1| Semaphorin-6A [Cricetulus griseus]
Length = 503
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 120/196 (61%), Gaps = 13/196 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 190 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 249
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 250 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 308
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+P PG C + PD LNFI++HPL
Sbjct: 309 VFTGRFKEQKSPDSTWTPVPDERVPKPGPGCCAGSSSLERYTTSNEFPDDTLNFIKTHPL 368
Query: 203 MDEAVAHRDNKPVFYR 218
MDEAV N+P F R
Sbjct: 369 MDEAVPSIINRPWFLR 384
>gi|47230648|emb|CAF99841.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1016
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 134/226 (59%), Gaps = 19/226 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FF+RE AVE + GK V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 224 EPHFLHAAEYGNYVYFFYREIAVEQSSLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVK 283
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PGE FYF+ +Q DI + G + GVFTT + GSA+C+FS+ DIE+
Sbjct: 284 ARLNCSVPGESFFYFDVLQSITDIININGVPS-VVGVFTTQMNSIPGSAVCAFSMADIEK 342
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ T S W P ++P+PRPG C + PD L FI+SHPL
Sbjct: 343 VFWGRFKEQKTQDSVWTPFPEEKLPKPRPGSCAGHSPAASFKSSIEFPDDTLQFIKSHPL 402
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF 246
MD AV ++P F + + + T L VD G Y V F
Sbjct: 403 MDTAVPSLGDEPWFTKTRVRYRLTALAVD----NEAGPHKNYTVVF 444
>gi|426216552|ref|XP_004002525.1| PREDICTED: semaphorin-6C isoform 3 [Ovis aries]
Length = 924
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 133/225 (59%), Gaps = 20/225 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 298
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 299 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 358
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYI 243
HPL+D AV ++P+ L T + VD + TT ++
Sbjct: 359 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYSNTTVLFL 403
>gi|426216550|ref|XP_004002524.1| PREDICTED: semaphorin-6C isoform 2 [Ovis aries]
Length = 964
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 131/221 (59%), Gaps = 20/221 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTT 239
HPL+D AV ++P+ L T + VD + TT
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYSNTT 439
>gi|355692694|gb|EHH27297.1| hypothetical protein EGK_17466 [Macaca mulatta]
gi|355754327|gb|EHH58292.1| hypothetical protein EGM_08108 [Macaca fascicularis]
Length = 1075
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 140/231 (60%), Gaps = 21/231 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKS--VFSRVARVCKRDTGG-KNILSQNWATY 91
+P F+ + + G YV+FFFRE AVE+ N GK+ V+SRVAR+CK D GG + +L ++W ++
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKASAVYSRVARICKNDMGGSQRVLEKHWTSF 279
Query: 92 LKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDI 148
LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DI
Sbjct: 280 LKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDI 338
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSH 200
E+ F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SH
Sbjct: 339 EKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSH 398
Query: 201 PLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
PLMD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 PLMDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 445
>gi|410912822|ref|XP_003969888.1| PREDICTED: semaphorin-6D-like [Takifugu rubripes]
Length = 1047
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 133/226 (58%), Gaps = 19/226 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FF+RE AVE + GK V+SRVAR+CK D GG + +L ++W +++K
Sbjct: 224 EPHFLHAAEYGNYVYFFYREIAVEQSSLGKVVYSRVARICKNDVGGSQRVLEKHWTSFMK 283
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PGE FYF+ +Q DI + G + GVFTT + GSA+C+FS+ DIE+
Sbjct: 284 ARLNCSVPGESFFYFDVLQSITDIININGVPS-VVGVFTTQMNSIPGSAVCAFSMADIEK 342
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ T S W P ++P+PRPG C PD L FI+SHPL
Sbjct: 343 VFWGRFKEQKTQDSVWTPFPEEKLPKPRPGSCAGHGPAASFKSSIEFPDDTLQFIKSHPL 402
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF 246
MD AV ++P F + + + T L VD G Y V F
Sbjct: 403 MDTAVPSLGDEPWFTKTRVRYRLTALAVD----NEAGPHKNYTVVF 444
>gi|147899938|ref|NP_001089133.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6D precursor [Xenopus laevis]
gi|83642779|dbj|BAE54371.1| semaphorin 6D4 [Xenopus laevis]
gi|213626596|gb|AAI69687.1| Semaphorin 6D4 [Xenopus laevis]
Length = 1085
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 164/296 (55%), Gaps = 24/296 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G Y++FFFRE AVE+ N GK+V SRVAR+CK D GG + +L ++W +++K
Sbjct: 220 EPHFLHAIEYGNYIYFFFREIAVEHNNLGKAVHSRVARICKNDLGGSQRVLEKHWTSFVK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
RLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+F+++DIE+
Sbjct: 280 TRLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VLGVFTTQLNSIPGSAVCAFTMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V RVP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFRGRFKEQKTPDSVWTAVPEDRVPKPRPGCCARHGFGEGYRASTEFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF-------THLVVDVVQYEVF--GTTSEYIVYFAATTTLR 253
MD A+ +P F + + + HL + Y V G+ + ++ A T
Sbjct: 399 MDSAIPSIIEEPWFTKTRVRYRLTAVAVDHLAGPHLNYTVMFVGSEAGVVLKILAKTNPF 458
Query: 254 TVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSV-HLSCFVKLPASMANQPMS 308
++ V LL+++ + + C + ++ ++ H + FV + P+S
Sbjct: 459 SLNDSV-LLEEIDAYNRAKCSGNSEEDRKVISLQMDRDHHALFVAFSGCIVRLPLS 513
>gi|183637581|gb|ACC64583.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Rhinolophus ferrumequinum]
Length = 959
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEYGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSAFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T + VD
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQVAVD 429
>gi|426216548|ref|XP_004002523.1| PREDICTED: semaphorin-6C isoform 1 [Ovis aries]
Length = 932
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 131/221 (59%), Gaps = 20/221 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTT 239
HPL+D AV ++P+ L T + VD + TT
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYSNTT 439
>gi|410968394|ref|XP_003990692.1| PREDICTED: semaphorin-6C [Felis catus]
Length = 758
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 221 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 280
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 281 LRLNCSVPGDSTFYFDVLQALTGPVNLYG----RSALFGVFTTQTNSIPGSAVCAFYLDD 336
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IE AF GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 337 IEHAFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 396
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T L VD
Sbjct: 397 HPLLDPAVPPATHQPLLTLTSRALLTQLAVD 427
>gi|395856119|ref|XP_003800485.1| PREDICTED: semaphorin-6C [Otolemur garnettii]
Length = 1012
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 403 DPAVPAATHQPLLTLTSRALLTQVAVD 429
>gi|194036253|ref|XP_001929695.1| PREDICTED: semaphorin-6C isoform 1 [Sus scrofa]
Length = 934
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 130/221 (58%), Gaps = 20/221 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTT 239
HPL+D AV ++P+ L T + VD + TT
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYRNTT 439
>gi|359063809|ref|XP_002686090.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Bos taurus]
Length = 963
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 282 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 338 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 397
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T + VD
Sbjct: 398 HPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|358411330|ref|XP_002684117.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Bos taurus]
Length = 963
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 282 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 338 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 397
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T + VD
Sbjct: 398 HPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|296489605|tpg|DAA31718.1| TPA: sema domain, transmembrane domain (TM), and cytoplasmic
domain, (semaphorin) 6C [Bos taurus]
Length = 931
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 282 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 337
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 338 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 397
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
HPL+D AV ++P+ L T + VD
Sbjct: 398 HPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|311254344|ref|XP_003125817.1| PREDICTED: semaphorin-6C isoform 3 [Sus scrofa]
Length = 926
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 132/225 (58%), Gaps = 20/225 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 298
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 299 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 358
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYI 243
HPL+D AV ++P+ L T + VD + TT ++
Sbjct: 359 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYRNTTVLFL 403
>gi|311254342|ref|XP_003125816.1| PREDICTED: semaphorin-6C isoform 2 [Sus scrofa]
Length = 966
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 130/221 (58%), Gaps = 20/221 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ------DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
RLNCS+PG+ FYF+ +Q ++Y + +GVFTT T + GSA+C+F ++D
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLY----GRSALFGVFTTQTNSIPGSAVCAFYLDD 338
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRS 199
IER F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++
Sbjct: 339 IERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKA 398
Query: 200 HPLMDEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTT 239
HPL+D AV ++P+ L T + VD + TT
Sbjct: 399 HPLLDPAVPPATHQPLLTLTSRALLTQVAVDGMAGPYRNTT 439
>gi|432916581|ref|XP_004079348.1| PREDICTED: semaphorin-6B-like [Oryzias latipes]
Length = 916
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 156/294 (53%), Gaps = 28/294 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ + K + SRVARVCK D GG +L + W T+LK
Sbjct: 223 EPYFVSAMEWGPHIYFFFREMAMEFHHLEKVMVSRVARVCKADLGGSPRVLEKQWTTFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCSIPG+ FYFN + +I ++ G D G+F+T + GSA+C F ++ + R
Sbjct: 283 ARLNCSIPGDSHFYFNLLHATSNIIRMQGRDV-ILGLFSTPPNSIPGSAVCVFDMQQLAR 341
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC------VNDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV VP+PRPG C + + TLPD VLNF+++HPLMD
Sbjct: 342 VFEGRFKEQKSPESIWTPVPDEAVPKPRPGGCSVQGSKFSSSTTLPDEVLNFVKTHPLMD 401
Query: 205 EAVAHRDNKP--VFYRRDLLFTHLVVDVVQYE-------VFGTTSEYIVYFAATTTLRTV 255
E V +P V T +VVD G+T I+ F + +V
Sbjct: 402 ETVPLLGQRPWVVKTMGRYQLTAMVVDTEAGPNKNRTVLFLGSTRGTILKFLMIPSGDSV 461
Query: 256 FVKVRLLQDVSNTSDSICESSVGRLKQ--TVTWGQSVHL------SCFVKLPAS 301
L++V + C + +Q +T +S H SC V+LP S
Sbjct: 462 SHSSVFLEEVEGFNPEKCGEDTPQARQLLALTLDRSSHTLLLAFPSCLVRLPTS 515
>gi|284005479|ref|NP_001164766.1| semaphorin-6C precursor [Oryctolagus cuniculus]
gi|217030846|gb|ACJ74008.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Oryctolagus cuniculus]
Length = 961
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 145/261 (55%), Gaps = 26/261 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGEHVYFFFREVSVEDSRLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFPSSRDLPDDVLIFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNTTVLFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSIC 273
R LL+++ S S C
Sbjct: 459 RSGRAEPVLLEEIDAYSPSRC 479
>gi|431896630|gb|ELK06042.1| Semaphorin-6C [Pteropus alecto]
Length = 675
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 126/208 (60%), Gaps = 14/208 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ +++ G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFIHAFEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
RLNCS+PG+ FYF+ +Q + P D + +GVFTT T + GSA+C+F ++DIER
Sbjct: 282 LRLNCSVPGDSAFYFDVLQALTG-PVDLFGRSALFGVFTTQTNSIPGSAVCAFYLDDIER 340
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPL 202
F GKFKEQ + W PV RVP PRPG C + LPD VL FI++HPL
Sbjct: 341 GFEGKFKEQRSLDGPWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVLTFIKAHPL 400
Query: 203 MDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
+D AV +P+ L T + VD
Sbjct: 401 LDPAVPPATRQPLLTLTSRALLTQVAVD 428
>gi|149612842|ref|XP_001517979.1| PREDICTED: semaphorin-6D [Ornithorhynchus anatinus]
Length = 549
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G +V+FFFRE AVE+ + GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHATEYGNFVYFFFREIAVEHNSLGKAVYSRVARICKNDVGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI V G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQAVTDILSVGGVPTVL-GVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W V RVP PRPG C + PD L+FI+SHPL
Sbjct: 339 VFEGRFKEQKSPDSVWTAVPEERVPSPRPGCCARHGLAEAYRTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MD AV +P F + + + T + VD
Sbjct: 399 MDLAVPSLAEEPWFTKTRVRYRLTAIAVDAA 429
>gi|395536003|ref|XP_003770010.1| PREDICTED: semaphorin-6C [Sarcophilus harrisii]
Length = 701
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHAVEHRDHVYFFFREVSVEDARLGRVQFSRVARVCKRDVGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIY-KVP-GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + VP + +GVFTT T + GSA+C+F ++DIE
Sbjct: 283 LRLNCSVPGDSTFYFDALQALTGPVPLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIEHG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSPDGAWTPVPEDRVPSPRPGSCAGLGRAASFPSSRDLPDEVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVFYRRD-LLFTHLVVD 229
D AV ++P+ R L T + VD
Sbjct: 403 DPAVPPATHRPLLTRTGRALLTQVAVD 429
>gi|12081909|dbj|BAB20670.1| semaphorin Y [Homo sapiens]
Length = 930
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE GK FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGKVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 462
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 463 PEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|47213153|emb|CAF93843.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1057
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 148/278 (53%), Gaps = 42/278 (15%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + D G YV+FF RE AVEY GK VFSRVARVCK D GG +L + W ++LK
Sbjct: 269 EPHFLHAIDYGNYVYFFLREMAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLK 328
Query: 94 AR-------------LNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGS 138
AR LNCS+PG+ FYF+ +Q + V + + GVFTT + GS
Sbjct: 329 ARPSVGDHLVSVQARLNCSVPGDSFFYFDVLQSLTNVLQVNQRPAVVGVFTTQANSIPGS 388
Query: 139 AICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LP 190
A+C F ++D+E+ F G+FKEQ +S +W PV +VP PRPG C + P
Sbjct: 389 AVCVFYMDDVEQVFTGRFKEQRSSDLSWTPVPEEQVPRPRPGTCAGEGPAADYKSSVQFP 448
Query: 191 DSVLNFIRSHPLMDEAVAHRDNKPVFYR---RDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
D +L FI+S+PLMDEAV +++PVF R R L T + VDV G T + V F
Sbjct: 449 DEMLGFIKSYPLMDEAVPAVNHRPVFTRTTSRSKL-TQIAVDVSA----GPTKDRTVMFL 503
Query: 248 ATTTLR----------TVFVKVRLLQDVSNTSDSICES 275
+ R V LL+D+ S C++
Sbjct: 504 GSEDGRILKLVASMRPNASVGAELLEDIYVYDPSRCDA 541
>gi|169410916|gb|ACA57926.1| Sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Callicebus moloch]
Length = 962
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 146/261 (55%), Gaps = 26/261 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLAFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ + L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTFTNRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSIC 273
R LL+++ S + C
Sbjct: 459 RSGGPEPILLEEIDAYSPARC 479
>gi|355718498|gb|AES06288.1| sema domain, transmembrane domain , and cytoplasmic domain, 6A
[Mustela putorius furo]
Length = 354
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 124/205 (60%), Gaps = 15/205 (7%)
Query: 39 VGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKARLN 97
V + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LKARLN
Sbjct: 1 VQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLN 60
Query: 98 CSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
CS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI F G
Sbjct: 61 CSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIANVFTG 119
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPLMDEA 206
+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPLMDEA
Sbjct: 120 RFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYTTSNEFPDDTLNFIKTHPLMDEA 179
Query: 207 VAHRDNKPVFYRRDLLF--THLVVD 229
V N+P F R + + T + VD
Sbjct: 180 VPSVINRPWFLRTMVRYRLTKIAVD 204
>gi|355758196|gb|EHH61433.1| hypothetical protein EGM_19895, partial [Macaca fascicularis]
Length = 695
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 282 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 402 DPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|40674845|gb|AAH65137.1| Sema5a protein [Mus musculus]
Length = 562
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 423
>gi|441665030|ref|XP_004091790.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Nomascus leucogenys]
Length = 1209
Score = 181 bits (458), Expect = 7e-43, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 132/206 (64%), Gaps = 15/206 (7%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
++P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++K
Sbjct: 337 IEPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMK 395
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV 153
ARLNCS PGE PFY+NE+Q + +P +D YGVFTT+ + SA+C+F++ I +AF
Sbjct: 396 ARLNCSRPGEVPFYYNELQSAFHLPEEDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFN 454
Query: 154 GKFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEA 206
G F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EA
Sbjct: 455 GPFRHQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEA 508
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V +P + + F+HLVVD+VQ
Sbjct: 509 VQPVTPEPCVTQDSVRFSHLVVDLVQ 534
>gi|284005174|ref|NP_001164716.1| semaphorin 5A-like protein [Saccoglossus kowalevskii]
gi|283464109|gb|ADB22638.1| semaphorin 5A-like protein [Saccoglossus kowalevskii]
Length = 935
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 30/230 (13%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV SY+IG Y++F+FRETAVEY+NCGK+++SRVARVCK D+GG +L NW T+ KAR
Sbjct: 91 PNFVSSYEIGSYIYFYFRETAVEYMNCGKTIYSRVARVCKNDSGGHFLLEDNWTTFTKAR 150
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PGEFPFYF+E+Q + + ++ Y VFTT + GSA+C + ++I F G
Sbjct: 151 LNCSLPGEFPFYFDELQGTFYIE-EENLTYAVFTTVKNSIHGSAVCVYDTKNIHDTFTGD 209
Query: 156 FKEQATSTSAWLPVLSSRVPEP------------RPGQCVNDTETLPDSVLNFIRSHPLM 203
FK Q + SAW+ + + PEP +P Q V E R + LM
Sbjct: 210 FKYQENAQSAWVKINN---PEPDFQCDTMGPDYGKPQQTVRKLEDA--------RKYQLM 258
Query: 204 DEAVAHRDNKPVFY--RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
D+AV P++Y + D FT +VVD+V+ G + V F T +
Sbjct: 259 DDAVQPTQAVPLYYEQKHDERFTDIVVDIVR----GKHQTFHVMFIGTES 304
>gi|355558412|gb|EHH15192.1| hypothetical protein EGK_01250, partial [Macaca mulatta]
Length = 718
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVD 429
>gi|281182832|ref|NP_001162414.1| semaphorin-6C precursor [Papio anubis]
gi|163781010|gb|ABY40786.1| sema domain, transmembrane domain, and cytoplasmic domain, 6C
(predicted) [Papio anubis]
Length = 962
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RAAQTA 488
>gi|351708815|gb|EHB11734.1| Semaphorin-6D [Heterocephalus glaber]
Length = 1079
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 142/243 (58%), Gaps = 27/243 (11%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKS------VFSRVARVCKRDTGG 80
RYD+ +P F+ + G YV+FFFRE AVE+ N GK+ V+SRVAR+CK D GG
Sbjct: 212 RYDSKWIKEPHFLHGIEYGNYVYFFFREIAVEHNNLGKAKSILQAVYSRVARICKNDMGG 271
Query: 81 -KNILSQNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLM 136
+ +L ++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT +
Sbjct: 272 SQRVLDKHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGVPT-VVGVFTTQLNSIP 330
Query: 137 GSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TET 188
GSA+C+FS++DIE+ F G+FKEQ T S W V +VP+PRPG C +
Sbjct: 331 GSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIE 390
Query: 189 LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF 246
PD L FI+SHPLMD AV ++P F + + + T + VD G Y V F
Sbjct: 391 FPDETLAFIKSHPLMDAAVPLIADEPWFTKTRVRYRLTAIAVD----HSAGPHQNYTVIF 446
Query: 247 AAT 249
+
Sbjct: 447 VGS 449
>gi|426331396|ref|XP_004026667.1| PREDICTED: semaphorin-6C [Gorilla gorilla gorilla]
Length = 930
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|332220234|ref|XP_003259262.1| PREDICTED: semaphorin-6C isoform 1 [Nomascus leucogenys]
Length = 962
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSRGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|388452398|ref|NP_001252644.1| semaphorin-6C precursor [Macaca mulatta]
gi|387540744|gb|AFJ70999.1| semaphorin-6C isoform 2 precursor [Macaca mulatta]
Length = 930
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RAAQTA 488
>gi|301615711|ref|XP_002937315.1| PREDICTED: semaphorin-6D-like [Xenopus (Silurana) tropicalis]
Length = 963
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 141/262 (53%), Gaps = 27/262 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P F+ + + G YV+FFFRE ++EY GK FSRV RVCK D GG +L + W ++LK
Sbjct: 219 EPHFIHAVEYGNYVYFFFREISMEYTTIGKVTFSRVGRVCKNDMGGSPRVLEKYWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + + + + GVF T + GS +C++ ++DIE+
Sbjct: 279 ARLNCSVPGDSFFYFDVLQSVSDILTINNRPAVIGVFGTQANSITGSGVCAYYMDDIEKV 338
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPLM 203
F GKFKEQ T+ SAW P+ +VP PRPG C + PD L+FI+S+PL+
Sbjct: 339 FNGKFKEQKTTESAWTPIPEDKVPTPRPGCCAGYGKAATYKTSNEFPDETLSFIKSYPLL 398
Query: 204 DEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATT----------T 251
DEAV P F + F THL D G Y V F + T
Sbjct: 399 DEAVLSITETPWFTKTTSRFKLTHLAADTSA----GPYGNYTVLFLGSEDGKVLKVLSGT 454
Query: 252 LRTVFVKVRLLQDVSNTSDSIC 273
V+ LL+D++ + + C
Sbjct: 455 TENSTVETLLLEDINVYNPAKC 476
>gi|126320975|ref|XP_001371845.1| PREDICTED: semaphorin-5A [Monodelphis domestica]
Length = 1074
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 138/239 (57%), Gaps = 28/239 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVASYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYE--VFGTTSEYIVYFAAT-TTLRTVFVKVRL 261
V P F + F+H+VVDVVQ + +F +I+Y A T++ V + L
Sbjct: 385 VVQPVTTIPYFMEDNTRFSHVVVDVVQGKDMLF-----HIIYLATDYGTIKKVLAPMNL 438
>gi|14010605|gb|AAK52051.1|AF363973_1 semaphorin 6C [Mus musculus]
Length = 963
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 224 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 283
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 284 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 343
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 344 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 403
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 404 DPAVPPATHQPLLTLTSRALLTQVAVD 430
>gi|426219265|ref|XP_004003848.1| PREDICTED: semaphorin-5B [Ovis aries]
Length = 1145
Score = 180 bits (457), Expect = 1e-42, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 277 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 335
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 336 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 394
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G V E L + L + LM EAV
Sbjct: 395 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQPVTP 453
Query: 213 KPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 454 EPCVTQDSVRFSHLVVDLVQ 473
>gi|296226097|ref|XP_002807661.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Callithrix jacchus]
Length = 1340
Score = 180 bits (457), Expect = 1e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 473 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 531
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 532 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 590
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 591 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 644
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 645 QPVTPEPCVTQDSVRFSHLVVDLVQ 669
>gi|295849301|ref|NP_001171533.1| semaphorin-6C isoform 3 precursor [Homo sapiens]
Length = 922
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 363 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 422
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 423 PEPILLEEIDAYSPARCSGK--RTAQTA 448
>gi|148706835|gb|EDL38782.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Mus musculus]
Length = 968
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 229 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 289 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 349 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 408
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 409 DPAVPPATHQPLLTLTSRALLTQVAVD 435
>gi|19850865|gb|AAL99670.1|AF363972_1 semaphorin 6C short isoform 2 [Mus musculus]
Length = 923
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 184 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 243
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 244 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 303
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 304 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 363
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 364 DPAVPPATHQPLLTLTSRALLTQVAVD 390
>gi|6755464|ref|NP_035481.1| semaphorin-6C isoform 2 precursor [Mus musculus]
gi|8134721|sp|Q9WTM3.1|SEM6C_MOUSE RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|4521227|dbj|BAA76294.1| semaphorin Y [Mus musculus]
gi|148706834|gb|EDL38781.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Mus musculus]
gi|162319512|gb|AAI56071.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C [synthetic construct]
gi|162319644|gb|AAI57038.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C [synthetic construct]
Length = 931
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 224 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 283
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 284 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 343
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 344 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 403
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 404 DPAVPPATHQPLLTLTSRALLTQVAVD 430
>gi|433660824|ref|NP_001258953.1| semaphorin-6C isoform 1 precursor [Mus musculus]
Length = 963
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 224 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 283
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 284 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 343
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 344 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 403
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 404 DPAVPPATHQPLLTLTSRALLTQVAVD 430
>gi|14017955|dbj|BAB47498.1| KIAA1869 protein [Homo sapiens]
Length = 935
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 228 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 288 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 348 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 407
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 408 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 467
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 468 PEPILLEEIDAYSPARCSGK--RTAQTA 493
>gi|295849299|ref|NP_001171532.1| semaphorin-6C isoform 1 precursor [Homo sapiens]
Length = 962
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 462
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 463 PEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|16306552|ref|NP_112175.2| semaphorin-6C isoform 2 precursor [Homo sapiens]
gi|313104318|sp|Q9H3T2.4|SEM6C_HUMAN RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|168270750|dbj|BAG10168.1| semaphorin-6C precursor [synthetic construct]
Length = 930
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 462
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 463 PEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|18462032|gb|AAL72099.1|AF339153_1 semaphorin Y short isoform 2 [Homo sapiens]
Length = 922
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 363 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 418
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 419 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 448
>gi|395729875|ref|XP_003775630.1| PREDICTED: semaphorin-6C [Pongo abelii]
Length = 932
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGW 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|332810241|ref|XP_001170512.2| PREDICTED: semaphorin-6C isoform 4 [Pan troglodytes]
Length = 922
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 363 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 418
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 419 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 448
>gi|74145448|dbj|BAE36165.1| unnamed protein product [Mus musculus]
Length = 777
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 14/215 (6%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 60 KYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 119
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSF 143
++W ++LK RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F
Sbjct: 120 RHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAF 179
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLN 195
++DIER F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL
Sbjct: 180 YLDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLL 239
Query: 196 FIRSHPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 240 FIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 274
>gi|148706833|gb|EDL38780.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Mus musculus]
Length = 923
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 184 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 243
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 244 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 303
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 304 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 363
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 364 DPAVPPATHQPLLTLTSRALLTQVAVD 390
>gi|119573856|gb|EAW53471.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Homo sapiens]
Length = 922
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 363 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 418
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 419 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 448
>gi|344275448|ref|XP_003409524.1| PREDICTED: semaphorin-6C isoform 2 [Loxodonta africana]
Length = 935
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 11/193 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + F+GVFTT T + GSA+C+F ++DIE
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSAFFGVFTTQTNSIPGSAVCAFYLDDIEHG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAASFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF 216
D AV ++P+
Sbjct: 403 DPAVPPATHQPLL 415
>gi|148676921|gb|EDL08868.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_b [Mus musculus]
Length = 661
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 235 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 293
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 294 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 352
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 353 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 403
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 404 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 442
>gi|390476698|ref|XP_002759945.2| PREDICTED: semaphorin-6C isoform 1 [Callithrix jacchus]
Length = 1040
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 145/261 (55%), Gaps = 26/261 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 303 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 362
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 363 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 422
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 423 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 482
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 483 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 538
Query: 260 R-------LLQDVSNTSDSIC 273
R LL+++ S + C
Sbjct: 539 RSGGPEPILLEEIDAYSPARC 559
>gi|148706836|gb|EDL38783.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_d [Mus musculus]
Length = 858
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 119 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 178
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 179 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 238
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 239 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 298
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 299 DPAVPPATHQPLLTLTSRALLTQVAVD 325
>gi|397492966|ref|XP_003817387.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6C [Pan paniscus]
Length = 885
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGTEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|119226253|ref|NP_033180.2| semaphorin-5A precursor [Mus musculus]
gi|74200772|dbj|BAE24765.1| unnamed protein product [Mus musculus]
gi|74224531|dbj|BAE25254.1| unnamed protein product [Mus musculus]
gi|148676920|gb|EDL08867.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Mus musculus]
Length = 1074
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 423
>gi|37360582|dbj|BAC98269.1| mKIAA1869 protein [Mus musculus]
Length = 774
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 67 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 126
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 127 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 186
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 187 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 246
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 247 DPAVPPATHQPLLTLTSRALLTQVAVD 273
>gi|344275450|ref|XP_003409525.1| PREDICTED: semaphorin-6C isoform 3 [Loxodonta africana]
Length = 927
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 11/193 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + F+GVFTT T + GSA+C+F ++DIE
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSAFFGVFTTQTNSIPGSAVCAFYLDDIEHG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAASFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF 216
D AV ++P+
Sbjct: 363 DPAVPPATHQPLL 375
>gi|297663678|ref|XP_002810296.1| PREDICTED: semaphorin-6C isoform 1 [Pongo abelii]
Length = 964
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGW 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|74180414|dbj|BAE34160.1| unnamed protein product [Mus musculus]
Length = 710
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 423
>gi|410924427|ref|XP_003975683.1| PREDICTED: semaphorin-6B-like [Takifugu rubripes]
Length = 920
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 158/294 (53%), Gaps = 28/294 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV S + G +++FFFRE A+E+ + K + SRVARVCK D GG + +L + W T+LK
Sbjct: 246 EPYFVSSMEWGPHIYFFFREMAMEFHHLEKVMVSRVARVCKADLGGSQRVLEKQWTTFLK 305
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN + DI + G D G+F+T + GSA+C F ++ + +
Sbjct: 306 ARLNCSVPGDSHFYFNLLHATSDIIHMQGRDV-ILGLFSTPPNSIPGSAVCVFDMQQLAQ 364
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV VP+PRPG C + + TLPD VLNF+++HPLMD
Sbjct: 365 VFEGRFKEQKSPESIWTPVPDEAVPKPRPGGCAVQGSRFSSSTTLPDEVLNFVKTHPLMD 424
Query: 205 EAVAHRDNKP--VFYRRDLLFTHLVVDVVQYE-------VFGTTSEYIVYFAATTTLRTV 255
E V ++P V T +VVD G+T I+ F + +V
Sbjct: 425 ETVPLLGHRPWVVKTMGRYQLTAMVVDTEAGPHRNRTVLFLGSTRGTILKFLMIPSGDSV 484
Query: 256 FVKVRLLQDVSNTSDSIC--ESSVGRLKQTVTWGQSVHL------SCFVKLPAS 301
L++V + C +S R ++T ++ H SC V++P S
Sbjct: 485 SHSSVFLEEVEGFNPEKCGEDSPQARQLLSLTLDRTSHTLLLAFPSCLVRMPTS 538
>gi|332810239|ref|XP_001170541.2| PREDICTED: semaphorin-6C isoform 5 [Pan troglodytes]
Length = 962
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|380785729|gb|AFE64740.1| semaphorin-5A precursor [Macaca mulatta]
Length = 1074
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAIAQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVVVDVVQ 411
>gi|344275446|ref|XP_003409523.1| PREDICTED: semaphorin-6C isoform 1 [Loxodonta africana]
Length = 967
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 11/193 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + F+GVFTT T + GSA+C+F ++DIE
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSAFFGVFTTQTNSIPGSAVCAFYLDDIEHG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAASFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF 216
D AV ++P+
Sbjct: 403 DPAVPPATHQPLL 415
>gi|388452518|ref|NP_001253423.1| semaphorin-5A precursor [Macaca mulatta]
gi|387273365|gb|AFJ70177.1| semaphorin-5A precursor [Macaca mulatta]
Length = 1074
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAIAQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVVVDVVQ 411
>gi|355691209|gb|EHH26394.1| Semaphorin-F [Macaca mulatta]
Length = 997
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 142 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 200
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 201 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAIAQAFAG 259
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 260 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 310
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 311 VVQPVTTVPSFMEDNSRFSHVVVDVVQ 337
>gi|18462034|gb|AAL72100.1|AF339154_1 semaphorin Y [Homo sapiens]
gi|119573854|gb|EAW53469.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Homo sapiens]
Length = 962
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|18462030|gb|AAL72098.1|AF339152_1 semaphorin Y short isoform 1 [Homo sapiens]
gi|119573855|gb|EAW53470.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Homo sapiens]
gi|119573857|gb|EAW53472.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Homo sapiens]
Length = 930
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|297663680|ref|XP_002810297.1| PREDICTED: semaphorin-6C isoform 2 [Pongo abelii]
Length = 924
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 183 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 242
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 243 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 302
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 303 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 362
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 363 DPAVPPATHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGW 418
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 419 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 448
>gi|332810237|ref|XP_001170584.2| PREDICTED: semaphorin-6C isoform 7 [Pan troglodytes]
Length = 930
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 148/272 (54%), Gaps = 28/272 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKV 259
D AV ++P+ L T + VD + G S V F + T L+ +
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMA----GPHSNITVMFLGSNDGTVLKVLPPGG 458
Query: 260 R-------LLQDVSNTSDSICESSVGRLKQTV 284
R LL+++ S + C R QT
Sbjct: 459 RSGGPEPILLEEIDAYSPARCSGK--RTAQTA 488
>gi|25742793|ref|NP_059004.1| semaphorin-6C precursor [Rattus norvegicus]
gi|8134706|sp|Q9WTL3.1|SEM6C_RAT RecName: Full=Semaphorin-6C; AltName: Full=Semaphorin-Y; Short=Sema
Y; Flags: Precursor
gi|4521274|dbj|BAA76293.2| semaphorin Y [Rattus norvegicus]
gi|149030696|gb|EDL85733.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030697|gb|EDL85734.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030698|gb|EDL85735.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030699|gb|EDL85736.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
gi|149030700|gb|EDL85737.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_a [Rattus norvegicus]
Length = 960
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 282 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 402 DPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|431903064|gb|ELK09242.1| Semaphorin-5A [Pteropus alecto]
Length = 448
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGVFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKLQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
P F D F+H+ VDVVQ
Sbjct: 384 VAQPVTTVPAFMEDDSRFSHVAVDVVQ 410
>gi|19850863|gb|AAL99669.1|AF363971_1 semaphorin 6C short isoform 2 [Rattus norvegicus]
gi|149030701|gb|EDL85738.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030702|gb|EDL85739.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030703|gb|EDL85740.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030704|gb|EDL85741.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
gi|149030705|gb|EDL85742.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_b [Rattus norvegicus]
Length = 920
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 182 EPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 241
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 242 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 301
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 302 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLL 361
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 362 DPAVPPATHQPLLTLTSRALLTQVAVD 388
>gi|4521231|dbj|BAA76295.1| semaphorin Y short isoform [Rattus norvegicus]
gi|149030706|gb|EDL85743.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030707|gb|EDL85744.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030708|gb|EDL85745.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030709|gb|EDL85746.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
gi|149030710|gb|EDL85747.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6C, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 282 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 402 DPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|410970587|ref|XP_003991759.1| PREDICTED: semaphorin-5B [Felis catus]
Length = 1057
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 344 PFRSQENPRAAWLPIAN-----PIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATT--TLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ +TT +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTTSRSLRGCYLE 457
>gi|292611084|ref|XP_002660976.1| PREDICTED: semaphorin-6B [Danio rerio]
Length = 984
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 12/225 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K + SRVARVCK D GG + +L + W ++LK
Sbjct: 331 EPYFVSAVEWGPHIYFFFREMAMEFNYLEKVMVSRVARVCKGDLGGSQRVLERQWTSFLK 390
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCSIPG+ FYFN +Q I ++ G D GVF+T + + GSA+C+F ++ + R
Sbjct: 391 ARLNCSIPGDSHFYFNLLQSTSPIIRMQGRDV-ILGVFSTPSNSIPGSAVCAFDMQQLAR 449
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV VP PRPG C + + TLPD VLNFI+ HPLMD
Sbjct: 450 VFEGRFKEQKSPESIWTPVPDELVPRPRPGGCAVQGSRFSTSNTLPDEVLNFIKIHPLMD 509
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
EAV ++P + + ++ L VV E + +V+ +T
Sbjct: 510 EAVPLLGHRP-WIVKTMVRYQLNTMVVDTEAGPHRNRTVVFLGST 553
>gi|301774406|ref|XP_002922623.1| PREDICTED: semaphorin-5B-like [Ailuropoda melanoleuca]
Length = 1228
Score = 179 bits (454), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/200 (44%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 362 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 420
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 421 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 479
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G V E L + L + LM EAV
Sbjct: 480 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQPVTP 538
Query: 213 KPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 539 EPCVTQDSVRFSHLVVDLVQ 558
>gi|403302844|ref|XP_003942060.1| PREDICTED: semaphorin-6C [Saimiri boliviensis boliviensis]
Length = 1053
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 416 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 475
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 476 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 535
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 536 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLL 595
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 596 DPAVPPATHQPLLTLTSRPLLTQVAVD 622
>gi|403282211|ref|XP_003932550.1| PREDICTED: semaphorin-5A [Saimiri boliviensis boliviensis]
Length = 1074
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 385 VVQPVTTMPSFMEDNSRFSHVAVDVVQ 411
>gi|26335661|dbj|BAC31531.1| unnamed protein product [Mus musculus]
Length = 844
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 423
>gi|148676922|gb|EDL08869.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_c [Mus musculus]
Length = 863
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 235 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 293
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 294 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 352
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 353 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 403
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+HL VDVVQ T +I+Y A
Sbjct: 404 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLA 442
>gi|47227608|emb|CAG09605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 982
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 124/209 (59%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + D G +++FFFRE A+EY GK VF RVARVCK D GG +L + W ++LK
Sbjct: 153 EPYFVQAVDYGDFIYFFFREIAMEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLK 212
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
+RLNCSIPG+ FYFN +Q D+ + G D F+T + GSA+C++ + ++
Sbjct: 213 SRLNCSIPGDSHFYFNILQAVTDVIHINGKDV-VMATFSTPYNSIPGSAVCAYDMVEVAN 271
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W P +VP+PRPG C + PD LNFI+ HPL
Sbjct: 272 TFTGRFKEQKSPDSTWTPFPEEKVPKPRPGNCAGTPSMERYKVSNEFPDDTLNFIKMHPL 331
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F + + + T +VVD
Sbjct: 332 MDEAVPSIANRPWFLKTMVRYRLTRIVVD 360
>gi|344282215|ref|XP_003412870.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B-like [Loxodonta
africana]
Length = 1267
Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/200 (44%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 400 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 458
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 459 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 517
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G + E L + L + LM EAV
Sbjct: 518 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEMGPNENLTERSLQDAQRLFLMSEAVQPVTP 576
Query: 213 KPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 577 EPCVTQDSVRFSHLVVDLVQ 596
>gi|3080661|gb|AAC14668.1| semaphorin F [Homo sapiens]
Length = 494
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ 411
>gi|119599864|gb|EAW79458.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_b [Homo sapiens]
Length = 1156
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|7959149|dbj|BAA95969.1| KIAA1445 protein [Homo sapiens]
Length = 1202
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 335 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 393
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 394 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 452
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 453 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 506
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 507 QPVTPEPCVTQDSVRFSHLVVDLVQ 531
>gi|194380956|dbj|BAG64046.1| unnamed protein product [Homo sapiens]
Length = 683
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVD 429
>gi|395844839|ref|XP_003795158.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Otolemur garnettii]
Length = 1312
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 128/205 (62%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 445 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 503
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 504 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 562
Query: 155 KFKEQATSTSAWLPVLS-------SRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F+ Q + WLP+ + +PE P Q + + +L D+ F LM EAV
Sbjct: 563 PFRYQENPRATWLPIANPIPNFQCGTLPETGPNQNLTE-RSLQDAQRLF-----LMSEAV 616
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 617 QPVTPEPCVTQDSVRFSHLVVDLVQ 641
>gi|395833178|ref|XP_003789619.1| PREDICTED: semaphorin-5A [Otolemur garnettii]
Length = 1038
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 385 VVQPVTTVPAFMEDNSRFSHVAVDVVQ 411
>gi|50418190|gb|AAH77726.1| Sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B [Homo sapiens]
Length = 1151
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|395510825|ref|XP_003759669.1| PREDICTED: semaphorin-5A-like, partial [Sarcophilus harrisii]
Length = 596
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 219 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 277
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 278 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 336
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 337 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 387
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 388 VVQPVTTVPYFMEDNSRFSHVAVDVVQ 414
>gi|444515088|gb|ELV10750.1| Semaphorin-6C [Tupaia chinensis]
Length = 904
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 203 EPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 262
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIE
Sbjct: 263 LRLNCSVPGDSAFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIEHG 322
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++HPL+
Sbjct: 323 FEGKFKEQRSLDGAWTPVPEDRVPSPRPGSCAGTGAAASFPSSRDLPDDVLIFIKAHPLL 382
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 383 DPAVPPATHQPLLTLTSRALLTQVAVD 409
>gi|41053391|ref|NP_956286.1| semaphorin-6A precursor [Danio rerio]
gi|38197291|gb|AAH61707.1| Zgc:66106 [Danio rerio]
Length = 968
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 133/229 (58%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D +++FFFRE A+EY + GK VF RVARVCK D+GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYEDFIYFFFREIAMEYNSMGKVVFPRVARVCKSDSGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
RLNCSIPG+ FYFN +Q D+ + G D F+T + GSA+C++ + +I
Sbjct: 279 TRLNCSIPGDSHFYFNILQAVTDVIHISGRDV-VMATFSTPYNSIPGSAVCAYDMSEIAL 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
AF G+FKEQ + S W PV RVP+PRPG C + PD L+FI++HPL
Sbjct: 338 AFTGRFKEQKSPDSTWTPVPEERVPKPRPGVCAGSSSVEKFKVSSEFPDDSLSFIKAHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
M+EAV N+P F + + + T + VD G S + V F +
Sbjct: 398 MEEAVPAIANRPWFLKTMVRYRLTRIAVD----NAAGPHSNHTVVFLGS 442
>gi|426341840|ref|XP_004036231.1| PREDICTED: semaphorin-5B isoform 1 [Gorilla gorilla gorilla]
gi|426341844|ref|XP_004036233.1| PREDICTED: semaphorin-5B isoform 3 [Gorilla gorilla gorilla]
Length = 1151
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|373432659|ref|NP_001243276.1| semaphorin-5B isoform 2 [Homo sapiens]
Length = 1205
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 338 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 396
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 397 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 455
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 456 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 509
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 510 QPVTPEPCVTQDSVRFSHLVVDLVQ 534
>gi|221040856|dbj|BAH12129.1| unnamed protein product [Homo sapiens]
Length = 1205
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 338 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 396
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 397 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 455
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 456 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 509
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 510 QPVTPEPCVTQDSVRFSHLVVDLVQ 534
>gi|168270554|dbj|BAG10070.1| semaphorin-5B precursor [synthetic construct]
Length = 1151
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|91982767|ref|NP_001026872.2| semaphorin-5B isoform 1 [Homo sapiens]
gi|373432656|ref|NP_001243275.1| semaphorin-5B isoform 1 [Homo sapiens]
gi|212276522|sp|Q9P283.4|SEM5B_HUMAN RecName: Full=Semaphorin-5B
gi|119599863|gb|EAW79457.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_a [Homo sapiens]
gi|158256250|dbj|BAF84096.1| unnamed protein product [Homo sapiens]
Length = 1151
Score = 179 bits (453), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|126313713|ref|XP_001366206.1| PREDICTED: semaphorin-6C [Monodelphis domestica]
Length = 941
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 123/207 (59%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVHAVEHRDHVYFFFREVSVEDARLGRVQFSRVARVCKRDIGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIY-KVP-GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + P +GVFTT T + GSA+C+F ++DIER
Sbjct: 283 LRLNCSVPGDSAFYFDVLQALTGPTPLHGRPALFGVFTTQTNSIPGSAVCAFYMDDIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSPDGAWTPVPEDRVPSPRPGSCAGVGRAASFPSSRDLPDEVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVFYR-RDLLFTHLVVD 229
D V + P F R L T + VD
Sbjct: 403 DPVVPPATHGPFFTRIGRALLTQVAVD 429
>gi|194664080|ref|XP_001788332.1| PREDICTED: semaphorin-5B [Bos taurus]
gi|297470929|ref|XP_002684855.1| PREDICTED: semaphorin-5B [Bos taurus]
gi|296491408|tpg|DAA33471.1| TPA: semaphorin 6B-like [Bos taurus]
Length = 1086
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 143/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 219 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 277
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 278 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 336
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 337 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQ 391
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATT--TLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ +TT +LR +++
Sbjct: 392 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTTSRSLRGCYLE 450
>gi|431896028|gb|ELK05446.1| Semaphorin-6D [Pteropus alecto]
Length = 1079
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 139/241 (57%), Gaps = 31/241 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKS------------VFSRVARVCKRDTGG-K 81
+P F+ + + G YV+FFFRE AVE+ N GK+ V+SRVAR+CK D GG +
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKANLGLFRAKYREAVYSRVARICKNDMGGSQ 279
Query: 82 NILSQNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGS 138
+L ++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GS
Sbjct: 280 RVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGS 338
Query: 139 AICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLP 190
A+C+FS++DIE+ F G+FKEQ T S W V +VP+PRPG C + P
Sbjct: 339 AVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCARHGLAEAFKTSIDFP 398
Query: 191 DSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAA 248
D L+FI+SHPLMD AV +P F + + + T + VD G Y V F
Sbjct: 399 DETLSFIKSHPLMDSAVPPIAEEPWFTKTRIRYRLTAIAVD----HSAGPYQNYTVIFVG 454
Query: 249 T 249
+
Sbjct: 455 S 455
>gi|397509693|ref|XP_003825251.1| PREDICTED: semaphorin-5B isoform 1 [Pan paniscus]
gi|397509695|ref|XP_003825252.1| PREDICTED: semaphorin-5B isoform 2 [Pan paniscus]
gi|397509697|ref|XP_003825253.1| PREDICTED: semaphorin-5B isoform 3 [Pan paniscus]
gi|397509699|ref|XP_003825254.1| PREDICTED: semaphorin-5B isoform 4 [Pan paniscus]
Length = 1151
Score = 178 bits (452), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|426341842|ref|XP_004036232.1| PREDICTED: semaphorin-5B isoform 2 [Gorilla gorilla gorilla]
Length = 1165
Score = 178 bits (452), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 298 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 356
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 357 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 415
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 416 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 469
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 470 QPVTPEPCVTQDSVRFSHLVVDLVQ 494
>gi|355746475|gb|EHH51089.1| hypothetical protein EGM_10415 [Macaca fascicularis]
Length = 981
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 139/232 (59%), Gaps = 18/232 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDSVL---NFIRSHP--LMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + +H LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAHRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V +E A +T R+V
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTIKALSTASRSV 450
>gi|355749813|gb|EHH54151.1| Semaphorin-F [Macaca fascicularis]
Length = 1074
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAIAQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ 411
>gi|194224024|ref|XP_001917420.1| PREDICTED: semaphorin-5A [Equus caballus]
Length = 1073
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+HL VDVVQ
Sbjct: 384 VVQPVTAVPSFMEDNSRFSHLAVDVVQ 410
>gi|157817839|ref|NP_001101129.1| semaphorin-5A precursor [Rattus norvegicus]
gi|426020751|sp|D3ZTD8.1|SEM5A_RAT RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|149026507|gb|EDL82657.1| rCG53309 [Rattus norvegicus]
Length = 1074
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+H+ VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---DTLVHIIYLA 423
>gi|332228051|ref|XP_003263204.1| PREDICTED: semaphorin-5A [Nomascus leucogenys]
Length = 1074
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDF-IYGIFTTNVNSIAASAVCVFNLSAIAQAFAG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ 411
>gi|395733234|ref|XP_003776202.1| PREDICTED: semaphorin-5B isoform 4 [Pongo abelii]
Length = 1205
Score = 177 bits (450), Expect = 5e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 338 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 396
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 397 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIPASAVCAFNLSAISQAFNG 455
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 456 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 509
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 510 QPVTPEPCVTQDSVRFSHLVVDLVQ 534
>gi|395733230|ref|XP_003776200.1| PREDICTED: semaphorin-5B isoform 2 [Pongo abelii]
gi|395733232|ref|XP_003776201.1| PREDICTED: semaphorin-5B isoform 3 [Pongo abelii]
Length = 1151
Score = 177 bits (450), Expect = 5e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIPASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>gi|432873676|ref|XP_004072335.1| PREDICTED: semaphorin-6A-like [Oryzias latipes]
Length = 1016
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 125/209 (59%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+EY GK VF RVARVCK D GG +L + W ++LK
Sbjct: 219 EPYFVQAVNYGDFIYFFFREIAMEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
+RLNCSIPG+ FYFN +Q ++ V G D F+T + GSA+C++ + ++ +
Sbjct: 279 SRLNCSIPGDSHFYFNILQAVTEVIHVNGRDV-VLATFSTPYNSIPGSAVCAYDMAEVAK 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W P +VP+PRPG C + PD LNFI+ HPL
Sbjct: 338 TFTGRFKEQKSPDSTWTPFPEEKVPKPRPGSCAGSPSMEKYKISNEFPDDTLNFIKMHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F + + + T +VVD
Sbjct: 398 MDEAVPSIANRPWFLKTMVRYRLTRIVVD 426
>gi|354473032|ref|XP_003498740.1| PREDICTED: semaphorin-6C-like [Cricetulus griseus]
Length = 974
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 126/207 (60%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPTFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIE
Sbjct: 282 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIEHG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLLFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 402 DPAVPPATHQPLLTLTSRALLTQVAVD 428
>gi|348561904|ref|XP_003466751.1| PREDICTED: semaphorin-5A-like [Cavia porcellus]
Length = 1073
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYHELQSTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKFQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 384 VVQPVTTAPAFLEDNSRFSHVVVDVVQ 410
>gi|363730594|ref|XP_419016.3| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A [Gallus gallus]
Length = 1076
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 126/208 (60%), Gaps = 22/208 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GGK +L W T++KA
Sbjct: 218 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGKFVLEDTWTTFMKA 276
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 277 RLNCSRPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAITQAFNG 335
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTE-TLPDSVLNFIRSHPLMD 204
FK Q S SAWLP P P P QC VN TE L D+ F LM
Sbjct: 336 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKYF-----LMH 385
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
E V P F + F+H+VVDVVQ
Sbjct: 386 EVVQPVIPIPYFMEDNSRFSHVVVDVVQ 413
>gi|8134718|sp|Q62217.1|SEM5A_MOUSE RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|1419019|emb|CAA66397.1| smaphorin F [Mus musculus]
Length = 1077
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRPARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIASSAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+HL VDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQ 411
>gi|426385157|ref|XP_004059096.1| PREDICTED: semaphorin-5A [Gorilla gorilla gorilla]
Length = 990
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 137/244 (56%), Gaps = 26/244 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 159 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 217
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 218 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 276
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 277 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 327
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ E +V+ T KVR+ +
Sbjct: 328 VVQPVTTVPSFMEDNSRFSHVAVDVVQ------GREALVHIIYLATDYGTIKKVRVPLNQ 381
Query: 266 SNTS 269
+++S
Sbjct: 382 TSSS 385
>gi|348527298|ref|XP_003451156.1| PREDICTED: semaphorin-6A [Oreochromis niloticus]
Length = 1021
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+EY GK VF RVARVCK D GG +L + W ++LK
Sbjct: 219 EPYFVQAVNYGDFIYFFFREIAMEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
+RLNCSIPG+ FYFN +Q D+ + G D F+T + GSA+C++ + ++
Sbjct: 279 SRLNCSIPGDSHFYFNILQAVTDVIHINGRDV-VMATFSTPYNSIPGSAVCAYDMAEVAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W P +VP+PRPG C + PD LNFI+ HPL
Sbjct: 338 TFTGRFKEQKSPDSTWTPFPEEKVPKPRPGNCAGTPPMERYKVSNEFPDDTLNFIKMHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F + + + T +VVD
Sbjct: 398 MDEAVPSIANRPWFLKTMVRYRLTRIVVD 426
>gi|351700257|gb|EHB03176.1| Semaphorin-5A [Heterocephalus glaber]
Length = 1073
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR +RVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRASRVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFLLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKFQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 384 VVQPVSPVPSFLEDNSRFSHVVVDVVQ 410
>gi|354466052|ref|XP_003495490.1| PREDICTED: semaphorin-5B-like [Cricetulus griseus]
Length = 1046
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV S+DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 256 EPNFVASFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 314
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I RAF G
Sbjct: 315 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISRAFNG 373
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 374 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 428
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT--LRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ +T + LR +++
Sbjct: 429 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRNLRGCYLE 487
>gi|114598960|ref|XP_517627.2| PREDICTED: semaphorin-5A isoform 2 [Pan troglodytes]
gi|397475714|ref|XP_003809271.1| PREDICTED: semaphorin-5A [Pan paniscus]
gi|410208204|gb|JAA01321.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A [Pan troglodytes]
Length = 1074
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 137/244 (56%), Gaps = 26/244 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ E +V+ T KVR+ +
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ------GREALVHIIYLATDYGTIKKVRVPLNQ 438
Query: 266 SNTS 269
+++S
Sbjct: 439 TSSS 442
>gi|148665472|gb|EDK97888.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_d [Mus musculus]
Length = 1184
Score = 177 bits (449), Expect = 7e-42, Method: Composition-based stats.
Identities = 91/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 288 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 346
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 347 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 405
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 406 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 459
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 460 QPVTPEPCVTQDSVRFSHLVVDLVQ 484
>gi|403302116|ref|XP_003941710.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B [Saimiri boliviensis
boliviensis]
Length = 1205
Score = 177 bits (449), Expect = 7e-42, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 129/205 (62%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 338 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 396
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 397 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSVAASAVCAFNLSAISQAFSG 455
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP ++ +P P G N TE +L D+ F LM EAV
Sbjct: 456 PFRYQENPRAAWLPT-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 509
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 510 QPVTPEPCVTQDSVRFSHLVVDLVQ 534
>gi|147904700|ref|NP_003957.2| semaphorin-5A precursor [Homo sapiens]
gi|109939725|sp|Q13591.3|SEM5A_HUMAN RecName: Full=Semaphorin-5A; AltName: Full=Semaphorin-F; Short=Sema
F; Flags: Precursor
gi|92110209|gb|AAI15697.1| Sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A [Homo sapiens]
gi|119628483|gb|EAX08078.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Homo sapiens]
gi|119628484|gb|EAX08079.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5A, isoform CRA_a [Homo sapiens]
gi|168275656|dbj|BAG10548.1| semaphorin-5A precursor [synthetic construct]
Length = 1074
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 137/244 (56%), Gaps = 26/244 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ E +V+ T KVR+ +
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ------GREALVHIIYLATDYGTIKKVRVPLNQ 438
Query: 266 SNTS 269
+++S
Sbjct: 439 TSSS 442
>gi|410949833|ref|XP_003981621.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A [Felis catus]
Length = 1060
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 124/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGVFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC +N TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYMNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V + P F + F+H+ VDVVQ
Sbjct: 384 VVQPVTSVPSFMEDNSRFSHVAVDVVQ 410
>gi|449493798|ref|XP_002189755.2| PREDICTED: semaphorin-5A [Taeniopygia guttata]
Length = 1076
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 131/218 (60%), Gaps = 15/218 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GGK +L+ W T++KA
Sbjct: 218 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGKFVLADTWTTFMKA 276
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 277 RLNCSRPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAITQAFNG 335
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTE----TLPDSVLNFIRSHPLMDEAVAH 209
FK Q S SAWLP P P P QC + L + L + LM E V
Sbjct: 336 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYANLTERNLQDAQKFFLMHEVVQP 390
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
P F + F+H+VVDVVQ + T +I+Y A
Sbjct: 391 VIPIPYFMEDNSRFSHVVVDVVQGK---DTLFHIIYLA 425
>gi|410922687|ref|XP_003974814.1| PREDICTED: semaphorin-6A-like [Takifugu rubripes]
Length = 1043
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FF+RE A+EY GK VF RVARVCK D GG +L + W ++LK
Sbjct: 219 EPYFVQAVNYGDFIYFFYREIAMEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
+RLNCSIPG+ FYFN +Q D+ + G D F+T + GSA+C++ + ++
Sbjct: 279 SRLNCSIPGDSHFYFNILQAVTDVIHINGKDV-VMATFSTPYNSIPGSAVCAYDMAEVAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W P +VP+PRPG C + PD LNFI+ HPL
Sbjct: 338 TFTGRFKEQKSPDSTWTPFPEEKVPKPRPGNCAGTPSMERYKVSNEFPDDTLNFIKMHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F + + + T +VVD
Sbjct: 398 MDEAVPSIANRPWFLKTMVRYRLTRIVVD 426
>gi|344240313|gb|EGV96416.1| Semaphorin-5B [Cricetulus griseus]
Length = 979
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV S+DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 133 EPNFVASFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 191
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I RAF G
Sbjct: 192 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISRAFNG 250
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 251 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 305
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT--LRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ +T + LR +++
Sbjct: 306 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRNLRGCYLE 364
>gi|194222762|ref|XP_001500249.2| PREDICTED: semaphorin-5B [Equus caballus]
Length = 1125
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 140/233 (60%), Gaps = 19/233 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 258 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 316
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 317 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNINSIAASAVCAFNLSAISQAFNG 375
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 376 PFRYQENPRAAWLPIAN-----PLPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQ 430
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ + ++ +T + A +TT R++
Sbjct: 431 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYISTESGTILKALSTTSRSL 483
>gi|443705241|gb|ELU01896.1| hypothetical protein CAPTEDRAFT_100167, partial [Capitella teleta]
Length = 453
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 18/210 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +Y+I + V+FFFRETAVEYINCGKSV+SRVAR+CK DTGGK +L NW ++ KA
Sbjct: 167 EPNFVSTYEINESVYFFFRETAVEYINCGKSVYSRVARLCKSDTGGKFVLEDNWTSFSKA 226
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS+PG +PFYFNE+Q Y V D Y VF+T+ T + SA+C ++ AF G
Sbjct: 227 RLNCSLPGTYPFYFNELQGTYFVE-DQQLVYAVFSTAPTSVYASAVCVYNSTSFNNAFSG 285
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFI-----RSH-------PL 202
+K QA + AW +RV RP V + +++N + R H +
Sbjct: 286 SYKYQANAEMAW-----TRVTNSRPNHQVYSWQQSKHTMINPLFSALQRQHLVDAQKFQM 340
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
MD+AV +PV + FTH+ V +Q
Sbjct: 341 MDDAVQPLSQEPVVVAENERFTHIAVHQIQ 370
>gi|281338840|gb|EFB14424.1| hypothetical protein PANDA_011602 [Ailuropoda melanoleuca]
Length = 1108
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 242 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 300
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 301 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 359
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 360 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQ 414
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 415 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 473
>gi|351694432|gb|EHA97350.1| Semaphorin-6C [Heterocephalus glaber]
Length = 991
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 124/207 (59%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLK 93
+P FV + + G +++FFFRE +VE G+ FSRVARVCKRD GG + L W ++LK
Sbjct: 222 EPHFVHALEHGDHIYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSSRALDGQWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + +GVFTT T + GSA+C+F ++ IER
Sbjct: 282 LRLNCSVPGDPTFYFDVLQALTGPSSLHGRAALFGVFTTQTNSIPGSAVCAFYLDVIERG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAASFSSSKDLPDDVLAFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV +P+ L T +VVD
Sbjct: 402 DPAVPPAIQQPLLTLTSRALLTQVVVD 428
>gi|348527784|ref|XP_003451399.1| PREDICTED: semaphorin-6B-like [Oreochromis niloticus]
Length = 849
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 142/244 (58%), Gaps = 15/244 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCKRD GG + +L + W ++LK
Sbjct: 199 EPYFVSAVEWGPHIYFFFREIAMEFNYLEKVVVSRVARVCKRDQGGSQRVLEKQWTSFLK 258
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN + I ++ G D GVF+T + GSA+C+F +E +
Sbjct: 259 ARLNCSVPGDSHFYFNLLHSTSPIIRMHGRDI-ILGVFSTPANSIPGSAVCAFDMEQLAA 317
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV +P+PRPG C N + + PD +LNF+++HPLMD
Sbjct: 318 VFDGRFKEQKSPESIWTPVPDEVIPKPRPGGCAVQGSKFNSSNSFPDEMLNFVKTHPLMD 377
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQD 264
EAV +P + R ++ L VV E + +++ ++ R +K ++ +
Sbjct: 378 EAVPSLGQRP-WIVRTMVRYQLNKIVVDTEAGPYRNRTVLFLGSS---RGTILKFLIMPN 433
Query: 265 VSNT 268
NT
Sbjct: 434 QDNT 437
>gi|348556790|ref|XP_003464203.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5B-like [Cavia
porcellus]
Length = 1224
Score = 176 bits (447), Expect = 1e-41, Method: Composition-based stats.
Identities = 91/205 (44%), Positives = 129/205 (62%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +F RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 357 EPNFVAAYDIGLFAYFLLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 415
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 416 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 474
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 475 PFRYQENPRAAWLPI-TNPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 528
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 529 QPVTPEPCVTQDSVRFSHLVVDLVQ 553
>gi|326917188|ref|XP_003204883.1| PREDICTED: semaphorin-5A-like, partial [Meleagris gallopavo]
Length = 915
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GGK +L W T++KA
Sbjct: 98 KPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGKFVLEDTWTTFMKA 156
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 157 RLNCSRPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAITQAFNG 215
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE F LM E
Sbjct: 216 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFF----LMHE 266
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+VVDVVQ
Sbjct: 267 VVQPVIPIPYFMEDNSRFSHVVVDVVQ 293
>gi|344249118|gb|EGW05222.1| Semaphorin-5A [Cricetulus griseus]
Length = 1046
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 128/222 (57%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDI + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIANFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+H+ VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---DTLVHIIYLA 423
>gi|449269442|gb|EMC80209.1| Semaphorin-5B [Columba livia]
Length = 1092
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 147/242 (60%), Gaps = 15/242 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRAGEIPFYYNELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--ETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q SAWLP L+ +P + G +D+ E L + VL + LM++ V
Sbjct: 344 PFRYQENPRSAWLPTLNP-IPNFQCGTLSDDSPNENLTERVLQDAQRLFLMNDVVQPVTV 402
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT----LRTVFV-KVRLL 262
P + + F+ LVVD+VQ Y V +EY A +T LR+ ++ ++++L
Sbjct: 403 DPYVTQDSIRFSKLVVDIVQGKDTLYHVMYIGTEYGTILKALSTTNRSLRSCYLEEMQIL 462
Query: 263 QD 264
D
Sbjct: 463 PD 464
>gi|9454055|gb|AAF87661.1|AF216389_1 semaphorin 6B isoform 1 [Homo sapiens]
Length = 517
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 134/249 (53%), Gaps = 11/249 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTSDSICE 274
S TS +C+
Sbjct: 466 SGTSGRVCQ 474
>gi|327270602|ref|XP_003220078.1| PREDICTED: semaphorin-5A-like [Anolis carolinensis]
Length = 1077
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 137/237 (57%), Gaps = 28/237 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG +V+FFFRE AVE+ +CGK VFSR ARVCK D GG+ +L W T++KA
Sbjct: 219 EPNFVSSYDIGNFVYFFFRENAVEH-DCGKIVFSRAARVCKNDIGGRFLLEDTWTTFMKA 277
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS+PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I + F G
Sbjct: 278 RLNCSLPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAVSAVCVFNMTAITQVFSG 336
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC +N TE FI LM E
Sbjct: 337 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYLNLTERNLQDAQKFI----LMHE 387
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYE--VFGTTSEYIVYFAAT-TTLRTVFVKV 259
+ P F + F+H+VVDVVQ + +F +I+Y A T++ V V
Sbjct: 388 VIQPITPVPYFMEDNSRFSHVVVDVVQGKDMLF-----HIIYLATDHGTIKKVLAPV 439
>gi|410921374|ref|XP_003974158.1| PREDICTED: semaphorin-6B-like, partial [Takifugu rubripes]
Length = 801
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 142/244 (58%), Gaps = 15/244 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G +++FFFRE A+E+ K V SRVARVCKRD GG + +L + W ++LK
Sbjct: 152 EPYFISAVEWGPHIYFFFREIAMEFNYLEKVVVSRVARVCKRDRGGSQRVLEKQWTSFLK 211
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN + + ++ G D GVF+T + GSA+C+F +E +
Sbjct: 212 ARLNCSVPGDSHFYFNLLHSTSPVIRMHGRDI-ILGVFSTPANSIPGSAVCAFDMEQLAG 270
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV +P+PRPG C N + + PD +LNF+++HPLMD
Sbjct: 271 VFDGRFKEQKSPESIWTPVADEAIPKPRPGGCAVQGSRFNSSNSFPDEMLNFVKTHPLMD 330
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQD 264
EA+ +P + R ++ L VV E + +++ ++ R +K ++ +
Sbjct: 331 EAIPSLGQRP-WIVRTMVRYQLNKIVVDTEAGPHRNRTVLFLGSS---RGTVLKFLIMPN 386
Query: 265 VSNT 268
NT
Sbjct: 387 QDNT 390
>gi|432101040|gb|ELK29347.1| Semaphorin-5B [Myotis davidii]
Length = 1069
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 127/204 (62%), Gaps = 13/204 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 248 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 306
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 307 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 365
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 366 PFRYQENPRAAWLPIAN-----PIPNFQCGTLSEVGPNENLTERSLQDAQRLFLMSEAVQ 420
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 421 PVTPEPCVTQDSVRFSHLVVDLVQ 444
>gi|355559395|gb|EHH16123.1| hypothetical protein EGK_11363 [Macaca mulatta]
Length = 1018
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 21/234 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R+V
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSV 451
>gi|344272240|ref|XP_003407943.1| PREDICTED: semaphorin-5A [Loxodonta africana]
Length = 1073
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDLGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFLLPELDL-LYGIFTTNVNSIAASAVCIFNLSAISQAFKG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + +H+ VDVVQ
Sbjct: 384 VVQPVTAVPAFMEDNSRLSHVAVDVVQ 410
>gi|354475930|ref|XP_003500179.1| PREDICTED: semaphorin-5A [Cricetulus griseus]
Length = 1074
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 128/222 (57%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDI + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIANFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+H+ VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---DTLVHIIYLA 423
>gi|402859224|ref|XP_003894066.1| PREDICTED: semaphorin-5B [Papio anubis]
Length = 1057
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 21/234 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R+V
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSV 451
>gi|297285147|ref|XP_002802721.1| PREDICTED: semaphorin-5B-like [Macaca mulatta]
Length = 1057
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 21/234 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFTYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R+V
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSV 451
>gi|301766498|ref|XP_002918670.1| PREDICTED: semaphorin-5A-like [Ailuropoda melanoleuca]
gi|281339465|gb|EFB15049.1| hypothetical protein PANDA_007165 [Ailuropoda melanoleuca]
Length = 1073
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C F++ I + F G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLPELDL-VYGVFTTNVNSIAASAVCVFNLSAISQVFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC +N TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYMNLTERSLQDAQRFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V + P F D F+++ VDVVQ
Sbjct: 384 VVQPVSSVPAFMEDDSRFSYMAVDVVQ 410
>gi|426341846|ref|XP_004036234.1| PREDICTED: semaphorin-5B isoform 4 [Gorilla gorilla gorilla]
Length = 1057
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 448
>gi|440907947|gb|ELR58024.1| Semaphorin-5B, partial [Bos grunniens mutus]
Length = 1094
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 127/204 (62%), Gaps = 13/204 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 228 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 287 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 345
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 346 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQ 400
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 401 PVTPEPCVTQDSVRFSHLVVDLVQ 424
>gi|2772584|gb|AAC09473.1| semaphorin F homolog [Homo sapiens]
Length = 1074
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 137/244 (56%), Gaps = 26/244 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI L+ E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LVHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ E +V+ T KVR+ +
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ------GREALVHIIYLATDYGTIKKVRVPLNQ 438
Query: 266 SNTS 269
+++S
Sbjct: 439 TSSS 442
>gi|221040072|dbj|BAH11799.1| unnamed protein product [Homo sapiens]
Length = 1057
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 448
>gi|373432662|ref|NP_001243277.1| semaphorin-5B isoform 3 precursor [Homo sapiens]
Length = 1057
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 448
>gi|119589616|gb|EAW69210.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_e [Homo sapiens]
Length = 517
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 134/249 (53%), Gaps = 11/249 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTSDSICE 274
S TS +C+
Sbjct: 466 SGTSGLMCQ 474
>gi|426341848|ref|XP_004036235.1| PREDICTED: semaphorin-5B isoform 5 [Gorilla gorilla gorilla]
Length = 1092
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 456
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 457 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 506
>gi|37181354|gb|AAQ88491.1| SEMA5B [Homo sapiens]
Length = 1092
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 456
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 457 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 506
>gi|397509701|ref|XP_003825255.1| PREDICTED: semaphorin-5B isoform 5 [Pan paniscus]
Length = 1092
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 456
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 457 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 506
>gi|350594507|ref|XP_003483911.1| PREDICTED: semaphorin-5A-like [Sus scrofa]
Length = 959
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDLGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D Y VF+T+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYAVFSTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VDVVQ
Sbjct: 384 VVQPVTAVPSFMEDNSRFSHVAVDVVQ 410
>gi|157820763|ref|NP_001100561.1| semaphorin-5B precursor [Rattus norvegicus]
gi|149060595|gb|EDM11309.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1041
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|410037363|ref|XP_516697.4| PREDICTED: semaphorin-5B isoform 2 [Pan troglodytes]
Length = 1112
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 281 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 339
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 340 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 398
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 399 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 453
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 454 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 503
>gi|224054649|ref|XP_002189131.1| PREDICTED: semaphorin-5B [Taeniopygia guttata]
Length = 1092
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 23/246 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRAGEIPFYYNELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--VND---TETLPDSVLNFIRSHPLMDEAVA 208
F+ Q SAWLP L+ P P QC +ND E L + VL + LM++ V
Sbjct: 344 PFRYQENPRSAWLPTLN-----PIPNFQCGTLNDKSPNENLTERVLQDAQRLFLMNDVVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT----LRTVFV-K 258
P + + F+ LVVD+VQ Y V +EY A +T LR+ ++ +
Sbjct: 399 PVTVDPYVTQDSIRFSKLVVDIVQGKDTLYHVMYIGTEYGTILKALSTTNKSLRSCYLEE 458
Query: 259 VRLLQD 264
+++L D
Sbjct: 459 MQILPD 464
>gi|351698028|gb|EHB00947.1| Semaphorin-5B [Heterocephalus glaber]
Length = 1002
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 21/234 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T+ KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFTKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +TT R++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTTRRSL 451
>gi|149060596|gb|EDM11310.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1066
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|426246722|ref|XP_004017140.1| PREDICTED: semaphorin-5A [Ovis aries]
Length = 1073
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYHELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGVYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F F+H+ VDVVQ
Sbjct: 384 VVQPVSPVPAFMEDSSRFSHVAVDVVQ 410
>gi|149060598|gb|EDM11312.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 1087
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|297670189|ref|XP_002813259.1| PREDICTED: semaphorin-5B isoform 1 [Pongo abelii]
Length = 1057
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 137/230 (59%), Gaps = 20/230 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIPASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTT 251
+P + + F+HLVVD+VQ Y V GT S I+ +T +
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTAS 448
>gi|164698462|ref|NP_038689.2| semaphorin-5B precursor [Mus musculus]
gi|341942022|sp|Q60519.2|SEM5B_MOUSE RecName: Full=Semaphorin-5B; AltName: Full=Semaphorin-G; Short=Sema
G; Flags: Precursor
gi|148665473|gb|EDK97889.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_e [Mus musculus]
Length = 1093
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|344237600|gb|EGV93703.1| Semaphorin-6B [Cricetulus griseus]
Length = 823
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVDLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG CV N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCVAPGMQYNASSALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 409 AVPSLGHAPWIVRTLMRHQLTRVAVDV 435
>gi|148665469|gb|EDK97885.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_a [Mus musculus]
Length = 1072
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|1418942|emb|CAA66398.1| samaphorin G [Mus musculus]
Length = 1093
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|297487819|ref|XP_002696487.1| PREDICTED: semaphorin-5A [Bos taurus]
gi|296475692|tpg|DAA17807.1| TPA: sema domain, seven thrombospondin repeats (type 1 and type
1-like), transmembrane domain (TM) and short cytoplasmic
domain, (semaphorin) 5A [Bos taurus]
Length = 1073
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYHELQGTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGVYVNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F F+H+ VDVVQ
Sbjct: 384 VVQPVSPVPAFMEDSSRFSHVAVDVVQ 410
>gi|30851457|gb|AAH52397.1| Sema5b protein [Mus musculus]
Length = 1122
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|148665471|gb|EDK97887.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B, isoform CRA_c [Mus musculus]
Length = 1072
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>gi|270015605|gb|EFA12053.1| semaphorin-5c [Tribolium castaneum]
Length = 884
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 133/233 (57%), Gaps = 12/233 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVG+++ +V+F FRETAVEY+NCGK+++SR+ARVCK D GG +L NW T+LKAR
Sbjct: 208 PQFVGTFETENFVYFLFRETAVEYMNCGKTIYSRIARVCKNDPGGHTMLKDNWTTFLKAR 267
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+ GE+PFYF+EIQ + VP D+ Y FTT + + GSAIC+F++ IE AF G
Sbjct: 268 LNCSVSGEYPFYFDEIQSMAYVP-DENMVYATFTTPSNSIAGSAICAFNLSSIEAAFAGP 326
Query: 156 FKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
FK + SAW N + S L + LMD AV P+
Sbjct: 327 FKYRENMDSAWGQYNVHHRDH------FNCKSSPRSSHLLETSKYQLMDSAVQATTLNPL 380
Query: 216 FYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNT 268
+ FTH+ +DV+ ++ TS +++Y + TT V K+ +L T
Sbjct: 381 HVAQLERFTHITIDVLSTKIH--TSVHVIYVSTTT---GVIKKISVLPRTQET 428
>gi|149508054|ref|XP_001519121.1| PREDICTED: semaphorin-5A [Ornithorhynchus anatinus]
Length = 1095
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 236 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 294
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I + F G
Sbjct: 295 RLNCSRPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAITQTFNG 353
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 354 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 404
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+ P F + F+H+ VDVVQ
Sbjct: 405 VIQPVIPVPYFMEDNSRFSHVAVDVVQ 431
>gi|440897171|gb|ELR48926.1| Semaphorin-5A, partial [Bos grunniens mutus]
Length = 607
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 128 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 186
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 187 RLNCSRPGEVPFYYHELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 245
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 246 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGVYVNLTERNLQDAQKFI----LMHE 296
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F F+H+ VDVVQ
Sbjct: 297 VVQPVSPVPAFMEDSSRFSHVAVDVVQ 323
>gi|118093825|ref|XP_422096.2| PREDICTED: semaphorin-5B [Gallus gallus]
Length = 1092
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 15/242 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRAGEIPFYYNELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--ETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q SAWLP ++ +P + G +D+ E L + VL + LM++ V
Sbjct: 344 PFRYQENPRSAWLPT-ANPIPNFQCGTLSDDSPNENLTERVLQDAQRLFLMNDVVQPVTV 402
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT----LRTVFV-KVRLL 262
P + + F+ LVVD+VQ Y V +EY A +T LR+ ++ ++++L
Sbjct: 403 DPYVTQDSIRFSKLVVDIVQGKDTLYHVMYIGTEYGTILKALSTTNRSLRSCYLEEMQIL 462
Query: 263 QD 264
D
Sbjct: 463 PD 464
>gi|326922994|ref|XP_003207727.1| PREDICTED: semaphorin-5B-like [Meleagris gallopavo]
Length = 1092
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 15/242 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRAGEIPFYYNELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--ETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q SAWLP ++ +P + G +D+ E L + VL + LM++ V
Sbjct: 344 PFRYQENPRSAWLPT-ANPIPNFQCGTLSDDSPNENLTERVLQDAQRLFLMNDVVQPVTV 402
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT----LRTVFV-KVRLL 262
P + + F+ LVVD+VQ Y V +EY A +T LR+ ++ ++++L
Sbjct: 403 DPYVTQDSIRFSKLVVDIVQGKDTLYHVMYIGTEYGTILKALSTTNRSLRSCYLEEMQIL 462
Query: 263 QD 264
D
Sbjct: 463 PD 464
>gi|395519105|ref|XP_003763692.1| PREDICTED: semaphorin-5B isoform 3 [Sarcophilus harrisii]
Length = 1059
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 20/238 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEIPFYYNELQSAFHLPEQDL-VYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM E V
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLRDVGPNENLTERSLQDAQRLFLMSEVVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQ 263
P + + F+HLVVD+VQ G + Y V + T T L+ + R L+
Sbjct: 399 PVTPDPCVTQDSVRFSHLVVDLVQ----GKDTLYHVLYIGTESGTILKALSTASRSLR 452
>gi|91093541|ref|XP_966934.1| PREDICTED: similar to AGAP002424-PA [Tribolium castaneum]
Length = 873
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 133/233 (57%), Gaps = 12/233 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVG+++ +V+F FRETAVEY+NCGK+++SR+ARVCK D GG +L NW T+LKAR
Sbjct: 197 PQFVGTFETENFVYFLFRETAVEYMNCGKTIYSRIARVCKNDPGGHTMLKDNWTTFLKAR 256
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+ GE+PFYF+EIQ + VP D+ Y FTT + + GSAIC+F++ IE AF G
Sbjct: 257 LNCSVSGEYPFYFDEIQSMAYVP-DENMVYATFTTPSNSIAGSAICAFNLSSIEAAFAGP 315
Query: 156 FKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
FK + SAW N + S L + LMD AV P+
Sbjct: 316 FKYRENMDSAWGQYNVHHRDH------FNCKSSPRSSHLLETSKYQLMDSAVQATTLNPL 369
Query: 216 FYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNT 268
+ FTH+ +DV+ ++ TS +++Y + TT V K+ +L T
Sbjct: 370 HVAQLERFTHITIDVLSTKIH--TSVHVIYVSTTT---GVIKKISVLPRTQET 417
>gi|348500940|ref|XP_003438029.1| PREDICTED: semaphorin-6B-like [Oreochromis niloticus]
Length = 893
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 144/253 (56%), Gaps = 19/253 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ + K + SRVARVCK D GG + +L + W T+LK
Sbjct: 218 EPYFVSAMEWGPHIYFFFREMAMEFHHLEKVMVSRVARVCKSDLGGSQRVLEKQWTTFLK 277
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN + I + G D G+F+T + GSA+C F ++ +
Sbjct: 278 ARLNCSVPGDSHFYFNLLHATSGIIHMQGRDV-ILGLFSTPPNSIPGSAVCVFDMQQLAH 336
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV VP+PRPG C + + TLPD VLNF+++HPLMD
Sbjct: 337 VFEGRFKEQKSPESIWTPVPDEAVPKPRPGGCAVQGSRFSSSTTLPDEVLNFVKTHPLMD 396
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQD 264
E V ++P + + + L VV E + +++ +T R +K ++
Sbjct: 397 ETVPLLGHRP-WVVKTMGRYQLTAMVVDTEAGPHKNRTVLFLGST---RGTILKFLMIP- 451
Query: 265 VSNTSDSICESSV 277
+ DS+ SSV
Sbjct: 452 ---SGDSVSHSSV 461
>gi|395519101|ref|XP_003763690.1| PREDICTED: semaphorin-5B isoform 1 [Sarcophilus harrisii]
Length = 1095
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 20/238 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEIPFYYNELQSAFHLPEQDL-VYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM E V
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLRDVGPNENLTERSLQDAQRLFLMSEVVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQ 263
P + + F+HLVVD+VQ G + Y V + T T L+ + R L+
Sbjct: 399 PVTPDPCVTQDSVRFSHLVVDLVQ----GKDTLYHVLYIGTESGTILKALSTASRSLR 452
>gi|395519103|ref|XP_003763691.1| PREDICTED: semaphorin-5B isoform 2 [Sarcophilus harrisii]
Length = 1128
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 20/238 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEIPFYYNELQSAFHLPEQDL-VYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC V E L + L + LM E V
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLRDVGPNENLTERSLQDAQRLFLMSEVVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQ 263
P + + F+HLVVD+VQ G + Y V + T T L+ + R L+
Sbjct: 399 PVTPDPCVTQDSVRFSHLVVDLVQ----GKDTLYHVLYIGTESGTILKALSTASRSLR 452
>gi|194676657|ref|XP_583112.4| PREDICTED: semaphorin-5A [Bos taurus]
Length = 1051
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYHELQGTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC +N TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGVYMNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F F+H+ VDVVQ
Sbjct: 384 VVQPVSPMPAFMEDSSRFSHVAVDVVQ 410
>gi|410897551|ref|XP_003962262.1| PREDICTED: semaphorin-5B-like [Takifugu rubripes]
Length = 964
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 134/224 (59%), Gaps = 10/224 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +YDIG + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 272 EPHFISAYDIGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 330
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C+F++ I RAF G
Sbjct: 331 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAFNLSAITRAFNG 389
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q S WLP ++ +P + G ++ E L + L + LM++ V
Sbjct: 390 PFRSQENPRSTWLPT-ANPIPNFQCGTITDEGPNEGLTERSLQDAQRLYLMNDVVQPESV 448
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT 251
P+ + D+ F++LVVD+VQ Y V ++EY A T
Sbjct: 449 DPLVLQDDVRFSNLVVDIVQGMDTLYHVMYISTEYGSILKALAT 492
>gi|148229411|ref|NP_001079991.1| sema domain, seven thrombospondin repeats (type 1 and type 1-like),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 5B precursor [Xenopus laevis]
gi|37590696|gb|AAH59288.1| MGC68835 protein [Xenopus laevis]
Length = 1088
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 143/235 (60%), Gaps = 14/235 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 224 EPNFMAAYDIGIFTYFFFRENAVEH-DCGKTVYSRVARVCKNDYGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SAIC+F++ I +AF G
Sbjct: 283 RLNCSRPGEIPFYYNELQSTFLLPEQDL-IYGVFTTNVNSIAASAICAFNLSAITQAFNG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--ETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q SAWLP ++ +P + G +D+ E L + L + LM++ V
Sbjct: 342 PFRYQENPRSAWLPTINP-IPNFQCGILNDDSPNENLTERSLQDAQRLFLMNDVVQPVSV 400
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT----LRTVFVK 258
P+ + + F+ LVVD+VQ Y V +E+ A +T LR+ +++
Sbjct: 401 DPLVTQDSVRFSKLVVDIVQGKDTLYHVMYIGTEHGTILKALSTANRSLRSCYLE 455
>gi|47222015|emb|CAG08270.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1290
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 141/244 (57%), Gaps = 15/244 (6%)
Query: 28 HRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
HR+ +P F+ +YDIG + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L
Sbjct: 338 HRHSG-PEPHFISAYDIGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDT 395
Query: 88 WATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
W T++KARLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C+F++
Sbjct: 396 WTTFMKARLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAFNLSA 454
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TETLPDSVLNFIRSHPLMDE 205
I RAF G F+ Q S WLP ++ VP + G ++ E L + L + LM++
Sbjct: 455 ITRAFNGPFRSQENPRSTWLPT-ANPVPNFQCGTITDEGPNEGLTERSLQDAQRLYLMND 513
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF----GTTSEYIVYFAATTTLRTVF 256
V P+ + D+ F++LVVD+VQ Y V G E A L T+F
Sbjct: 514 VVQPESVDPLVLQDDVRFSNLVVDIVQGMDTLYHVMYISTGGWREGYAGGAGNERLLTLF 573
Query: 257 VKVR 260
+ +R
Sbjct: 574 LPIR 577
>gi|119589615|gb|EAW69209.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_d [Homo sapiens]
Length = 522
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 136/257 (52%), Gaps = 14/257 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTSDSICESSVGRLKQ 282
S TS C GR+ Q
Sbjct: 466 SGTSGLSC---CGRVCQ 479
>gi|410908903|ref|XP_003967930.1| PREDICTED: semaphorin-5A-like [Takifugu rubripes]
Length = 1082
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 130/233 (55%), Gaps = 26/233 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG+ VFSR RVCK D GG+ +L W T++KA
Sbjct: 224 EPNFVASYDIGNFTYFFFRENAVEH-DCGRMVFSRAGRVCKNDIGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I + F G
Sbjct: 283 RLNCSRPGEIPFNYNELQGTFYLP-ELELLYGIFTTNVNSIAASAVCTFNLSAISQVFKG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN TE F+ LM E
Sbjct: 342 PFKYQENSRSAWLP-----YPNPNPDFQCGTIDSGSYVNLTERNLQDAQKFL----LMHE 392
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT--TTLRTVF 256
V D P F + FTH+ VDVVQ G + + F AT T+R V
Sbjct: 393 VVQPVDPVPYFMEDGVRFTHVAVDVVQ----GKDVLFHIIFLATDYGTIRKVL 441
>gi|359323752|ref|XP_848441.3| PREDICTED: semaphorin-5A isoform 2 [Canis lupus familiaris]
Length = 1073
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + + D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLAELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC +N TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYMNLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V + P F F H+VVDVVQ
Sbjct: 384 VVQPVTSVPSFMEDSSRFFHMVVDVVQ 410
>gi|74141579|dbj|BAE38558.1| unnamed protein product [Mus musculus]
Length = 886
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 148/279 (53%), Gaps = 34/279 (12%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVYFAAT--- 249
AV + P R + T + VDV Q VF GT +++V A+
Sbjct: 409 AVPSLGHSPWIVRTLMRHQLTRVAVDVGAGPWGNQTIVFLGSEAGTVLKFLVKPNASVSG 468
Query: 250 TTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQ 288
TT ++F L++ C GR WGQ
Sbjct: 469 TTGPSIF-----LEEFETYRPDRC----GRPSSAGEWGQ 498
>gi|7305475|ref|NP_038690.1| semaphorin-6B precursor [Mus musculus]
gi|194394223|ref|NP_001123928.1| semaphorin-6B precursor [Mus musculus]
gi|8134709|sp|O54951.1|SEM6B_MOUSE RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin VIB;
Short=Sema VIB; AltName: Full=Semaphorin-N; Short=Sema
N; Flags: Precursor
gi|2687423|gb|AAC00493.1| semaphorin VIb [Mus musculus]
gi|74228190|dbj|BAE23975.1| unnamed protein product [Mus musculus]
gi|223460048|gb|AAI39416.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Mus musculus]
Length = 886
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G + F + + V+ V
Sbjct: 409 AVPSLGHSPWIVR--TLMRHQLTRVAVDVGAGPWGNQTIVFLGSEAGTVLKFLVKPNASV 466
Query: 266 SNTS---------DSICESSVGRLKQTVTWGQ 288
S T+ ++ GR WGQ
Sbjct: 467 SGTTGPSIFLEEFETYRPDRCGRPSSAGEWGQ 498
>gi|291225442|ref|XP_002732714.1| PREDICTED: semaphorin II-like protein-like [Saccoglossus
kowalevskii]
Length = 589
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 135/240 (56%), Gaps = 25/240 (10%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKA 94
PDF+ S+DIG+ V FF RE A+EY N GK V+SRVA+VCK+D GG N +L W T+LKA
Sbjct: 210 PDFISSFDIGEEVLFFLREIAMEYSNYGKVVYSRVAKVCKKDKGGSNHVLENIWTTFLKA 269
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDD-----TKFYGVFTTSTTGLMGSAICSFSIEDIE 149
R+ C+ PG+FPF FN IQD +K+ ++ T FY VFTT + GSAIC++++ D+
Sbjct: 270 RIICAFPGKFPFDFNNIQDTFKISYEENGKTTTIFYAVFTTPENAIPGSAICAYNLTDVN 329
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F E+ ++ AW P +P+PRPG CV+D+ + + L F +SH LM + +
Sbjct: 330 AVFNSGCLEKESAKHAWFPAEEDMIPDPRPGTCVDDSTSHSYNDLLFFKSHTLMSDTLKX 389
Query: 210 RDNKP----------VFYRRDLLFTHLVVDVVQYEV---------FGTTSEYIVYFAATT 250
+F+R ++ V +V++ V FG ++Y V A T
Sbjct: 390 XXXXXXXXFVSISIVIFFRNEIGIVQNVTNVMECPVEQPPEHKTIFGVKNDYSVECIAIT 449
>gi|16758220|ref|NP_445923.1| semaphorin-6B precursor [Rattus norvegicus]
gi|8134705|sp|O70141.1|SEM6B_RAT RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin-Z; Short=Sema
Z; Flags: Precursor
gi|3062808|dbj|BAA25687.1| semaphorin Z [Rattus norvegicus]
Length = 887
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASNALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G + F + + V+ V
Sbjct: 409 AVPSLGHSPWIVR--TLIRHQLTRVAVDVGAGPWGNQTIVFLGSEVGTVLKFLVKPNASV 466
Query: 266 SNTS---------DSICESSVGRLKQTVTWGQ 288
S T+ ++ GR WGQ
Sbjct: 467 SGTTGPSIFLEEFETYRPDRCGRSSSAGEWGQ 498
>gi|149028217|gb|EDL83655.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Rattus norvegicus]
Length = 931
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 140/274 (51%), Gaps = 20/274 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 273 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 332
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 333 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 392
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 393 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASNALPDEILNFVKTHPLMDE 452
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G + F + + V+ V
Sbjct: 453 AVPSLGHSPWIVR--TLIRHQLTRVAVDVGAGPWGNQTIVFLGSEVGTVLKFLVKPNASV 510
Query: 266 SNTS---------DSICESSVGRLKQTVTWGQSV 290
S T+ ++ GR WGQ +
Sbjct: 511 SGTTGPSIFLEEFETYRPDRCGRSSSAGEWGQRL 544
>gi|443685898|gb|ELT89363.1| hypothetical protein CAPTEDRAFT_220634 [Capitella teleta]
Length = 682
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 128/215 (59%), Gaps = 8/215 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P F+ S+DI YV+FFFRE +VE+ + +SRVARVCK D GG L +W T+LKAR
Sbjct: 223 PHFIASFDIEDYVYFFFREISVEHPYEDEVTYSRVARVCKNDRGGDTALKNSWTTFLKAR 282
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF-VG 154
+NCS+PG+ P YFN IQD+ +D+ FY VFT + SA+C ++ DIE+ F V
Sbjct: 283 INCSLPGDNPLYFNFIQDVV-YSKNDSAFYAVFTMTMGNTRSSAVCRMNLSDIEQFFRVE 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVL-NFIRSHPLMDEAVAHRDNK 213
F+EQ T W V ++VP PRPG+C D+E SV+ FIRS PLM E++ K
Sbjct: 342 HFQEQLDVTKLWQKVPQNKVPTPRPGECNPDSEHRLSSVIQQFIRSRPLMYESIQ---AK 398
Query: 214 PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAA 248
P++ D F L V VQ T+ Y V++ A
Sbjct: 399 PLYDFTDATFVRLAVQRVQNP--EQTNLYRVFYLA 431
>gi|19718780|ref|NP_115484.2| semaphorin-6B precursor [Homo sapiens]
gi|116242786|sp|Q9H3T3.4|SEM6B_HUMAN RecName: Full=Semaphorin-6B; AltName: Full=Semaphorin-Z; Short=Sema
Z; Flags: Precursor
gi|37182996|gb|AAQ89298.1| semaphorin Z [Homo sapiens]
gi|119589614|gb|EAW69208.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_c [Homo sapiens]
gi|148745340|gb|AAI42618.1| Sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Homo sapiens]
gi|208965490|dbj|BAG72759.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [synthetic construct]
Length = 888
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|327290541|ref|XP_003229981.1| PREDICTED: semaphorin-6B-like, partial [Anolis carolinensis]
Length = 423
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 11/194 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LK
Sbjct: 227 EPYFVHAVEWKSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSQRVLEKQWTSFLK 286
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN IQ DI ++ G VF+T + GSA+C+F + I
Sbjct: 287 ARLNCSVPGDSHFYFNVIQSVTDILEIDGRPVVL-AVFSTPANSIPGSAVCAFDMTQIAS 345
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
AF G+F+EQ + S W PV VP+PRPG C N + LPD +LNF+++HPLMD
Sbjct: 346 AFDGRFREQKSPESIWTPVPEELVPKPRPGCCTAPGMRYNSSSFLPDEILNFVKTHPLMD 405
Query: 205 EAVAHRDNKPVFYR 218
E+V N P R
Sbjct: 406 ESVPSLGNAPWIVR 419
>gi|348512188|ref|XP_003443625.1| PREDICTED: semaphorin-5A [Oreochromis niloticus]
Length = 1081
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG++VFSR RVCK D GG+ +L W T++KA
Sbjct: 224 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSRAGRVCKNDIGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I +AF G
Sbjct: 283 RLNCSRPGEIPFNYNELQGTFYLP-ELELLYGIFTTNVNSIAASAVCAFNLSAISQAFNG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN T+ F+ H ++
Sbjct: 342 PFKYQENSRSAWLP-----YPNPNPDFQCGTIDSGAYVNLTQRNLQDAQKFLLMHEVIQP 396
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F ++ FTH+ VDVVQ + T +I+Y A
Sbjct: 397 VVP----VPYFMEDNVRFTHVAVDVVQGK---DTLFHIIYLA 431
>gi|12081907|dbj|BAB20669.1| semaphorin Z [Homo sapiens]
Length = 888
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|13259171|gb|AAK16831.1|AF293363_1 semaphorin 6B isoform 2 [Homo sapiens]
Length = 687
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|119589613|gb|EAW69207.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_b [Homo sapiens]
Length = 679
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|334353405|emb|CCA61013.1| semaphorin-6Ba [Homo sapiens]
Length = 677
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|119589612|gb|EAW69206.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B, isoform CRA_a [Homo sapiens]
Length = 682
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|383860985|ref|XP_003705967.1| PREDICTED: semaphorin-5B [Megachile rotundata]
Length = 1103
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 132/220 (60%), Gaps = 8/220 (3%)
Query: 28 HRYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H+YD+ P FVGS++ +V+F FRE+AVEYINCGK ++SR+ARVCK D GG+ ++
Sbjct: 198 HQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQIMMR 257
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSI 145
+ W T+ KARLNCS+PGEFPFY++EIQ P +DT Y FTT T G+ GSAIC+F++
Sbjct: 258 EVWTTFSKARLNCSLPGEFPFYYDEIQGAVYHPEEDT-VYATFTTPTNGIAGSAICAFNM 316
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDE 205
I +F G FK Q +AW VP +C LP +++ R + LMD+
Sbjct: 317 SAITASFNGPFKHQENLGAAW---ERRPVPHHDRQRCSVSANILPHEIIDNQR-YQLMDD 372
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVF-GTTSEYIV 244
AV +P+ +TH+ +DV ++ G T Y+
Sbjct: 373 AVQSTTLEPLRTTILERYTHIAIDVTPTKLHRGVTVLYVA 412
>gi|410329705|gb|JAA33799.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Pan troglodytes]
Length = 888
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWIVR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|432094214|gb|ELK25889.1| Semaphorin-5A [Myotis davidii]
Length = 1073
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SY IG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYAIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDVGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC V+ TE FI LM E
Sbjct: 333 PFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGMYVSLTERNLQDAQKFI----LMHE 383
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+H+ VD+VQ
Sbjct: 384 VVQPVTAVPSFMEDNSRFSHIAVDLVQ 410
>gi|355762571|gb|EHH62015.1| Semaphorin-Z, partial [Macaca fascicularis]
Length = 582
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTSVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDV 434
>gi|194390172|dbj|BAG61848.1| unnamed protein product [Homo sapiens]
Length = 535
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHAPWILRTLMRHQLTRVAVDV 434
>gi|405975987|gb|EKC40512.1| Semaphorin-5A [Crassostrea gigas]
Length = 1044
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 123/221 (55%), Gaps = 11/221 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+PDFV +Y++ +++FFFRE A EYINCGK +++RVARVCK D GG NW TYLKA
Sbjct: 180 EPDFVSAYEVDNFIYFFFREVATEYINCGKRIYARVARVCKSDKGGDMHFKDNWTTYLKA 239
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV 153
RLNCSIPGE+PFYF+E+Q Y + +++ YGVFTT L GSA+C+F++ +F
Sbjct: 240 RLNCSIPGEYPFYFDELQSTYLLQSNNESLLYGVFTTPDNALPGSAVCAFNMSAFTTSFD 299
Query: 154 GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHP---LMDEAVAHR 210
G FK Q + AW EP +C + S H +MD AV
Sbjct: 300 GPFKYQEGARYAW---ERHNNKEPSLQKCPESSTLKRSSQSTETEKHSKYQMMDNAVQPH 356
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
PV ++H+V D V G T + V F ATTT
Sbjct: 357 TLSPVLLGPTERWSHVVADT----VVGKTGTFNVMFLATTT 393
>gi|355703007|gb|EHH29498.1| Semaphorin-Z, partial [Macaca mulatta]
Length = 582
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDV 434
>gi|296232581|ref|XP_002807832.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Callithrix jacchus]
Length = 801
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEGGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMAQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGTQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVYFAATTT 251
AV + P R + T + VDV Q VF GT +++V A+T+
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVQPNASTS 466
>gi|301626126|ref|XP_002942249.1| PREDICTED: semaphorin-6B-like [Xenopus (Silurana) tropicalis]
Length = 537
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 133/228 (58%), Gaps = 17/228 (7%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKA 94
P FV + + ++V+FFFRE A+E+ K V SRVARVCK D GG + +L + ++++LKA
Sbjct: 223 PYFVHAVEWKEHVYFFFREVAMEFNYLEKVVVSRVARVCKNDMGGSQRVLEKQFSSFLKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PG+ FYFN IQ + + G +F+T T + GSA+C F +E + F
Sbjct: 283 RLNCSVPGDSHFYFNVIQTVSNILNIGGRQVVLALFSTPTNSIPGSAVCVFDMEQVASVF 342
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDEA 206
G+F+EQ + S W PV VP PRPG CV N + +LPD VLNF++SHPLM+++
Sbjct: 343 SGRFREQRSPDSVWTPVPEELVPRPRPGCCVGHSHPYNSSRSLPDEVLNFVKSHPLMEDS 402
Query: 207 VAHRDNKPVFYR---RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V P R R+ L THL VD G + V F A+ +
Sbjct: 403 VPSIGGFPWITRTLTRNQL-THLAVDASS----GVHGNHTVLFLASDS 445
>gi|432931028|ref|XP_004081579.1| PREDICTED: semaphorin-5B-like [Oryzias latipes]
Length = 1120
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 18/228 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +Y+IG + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 252 EPHFISAYEIGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 310
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C+F++ I +AF G
Sbjct: 311 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAFNLSAITQAFNG 369
Query: 155 KFKEQATSTSAWLPVLSSRVPEP-RPGQC--VND---TETLPDSVLNFIRSHPLMDEAVA 208
F+ Q S WLP P P R QC ++D E L + L + LM++ V
Sbjct: 370 PFRSQENPRSTWLP-----TPNPIRDFQCGTISDHGPNEGLTERSLQDAQRLYLMNDVVQ 424
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT 251
P+ + D+ F++LVVD+VQ Y V ++EY A T
Sbjct: 425 PESVDPLVMQDDVRFSNLVVDIVQGMDTLYHVMYISTEYGTILKALAT 472
>gi|395831437|ref|XP_003788808.1| PREDICTED: semaphorin-6B [Otolemur garnettii]
Length = 889
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGNHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTHVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHGPWIVRTLMRHQLTRVAVDV 434
>gi|213159346|ref|YP_002321389.1| semaphorin-like protein [Oryctes rhinoceros virus]
gi|202073532|gb|ACH96208.1| semaphorin-like protein [Oryctes rhinoceros virus]
Length = 420
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 37 DFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARL 96
+FV S YVFFF+RE AVE+INCGK+++SRVARVCK D GG + S W ++LK RL
Sbjct: 64 NFVASLAFNGYVFFFYREVAVEHINCGKTIYSRVARVCKNDHGGPHRYSDKWTSFLKTRL 123
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKF-------YGVFTTSTTGLMGSAICSFSIEDIE 149
NCS+PGEFPFYF+E+Q + + F YGVFTT T + GSAIC F ++ I+
Sbjct: 124 NCSVPGEFPFYFDELQTMSDIVTIQFGFIKTLHIVYGVFTTPTNAIGGSAICMFDMDQIQ 183
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+F G +K + S WLP+ ++ G+CV ++ L ++ + F +H LMD+AV+
Sbjct: 184 NSFTGSYKHRQNIDSNWLPMTKNQT-----GECVRNSSMLSENDVVFALTHTLMDQAVSS 238
Query: 210 R 210
R
Sbjct: 239 R 239
>gi|332029263|gb|EGI69246.1| Semaphorin-5B [Acromyrmex echinatior]
Length = 1042
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 133/223 (59%), Gaps = 19/223 (8%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVGS++ +V+F FRE+AVEYINCGK ++SR+ARVCK D GG+ ++ W T+ KAR
Sbjct: 161 PQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQIMMKDVWTTFSKAR 220
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++ I +F G
Sbjct: 221 LNCSLPGEFPFYYDEIQGAAYHP-EEGIIYATFTTPINGIAGSAICAFNMSAIVASFNGP 279
Query: 156 FKEQATSTSAWLPVLSSRVPEPRP------GQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
FK Q + +AW E RP +C + ++T P +++ R + LMDEAV
Sbjct: 280 FKYQENAGAAW---------ERRPVAHHNHQRCGSSSDTAPHQIMDNQR-YQLMDEAVQS 329
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
+P+ FTH+ VDV ++ + + ++Y A T L
Sbjct: 330 TMLEPLHTVTLERFTHIAVDVTPTKLHRSVT--VLYVATATGL 370
>gi|297476802|ref|XP_002688976.1| PREDICTED: semaphorin-6B [Bos taurus]
gi|296485711|tpg|DAA27826.1| TPA: semaphorin 6B-like [Bos taurus]
Length = 815
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 141/249 (56%), Gaps = 25/249 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVY---FAAT 249
AV + P R + T + VDV Q +F GT +++V+ A+
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVIFLGSEAGTVLKFLVWPNASASG 467
Query: 250 TTLRTVFVK 258
TT +VF++
Sbjct: 468 TTGPSVFLE 476
>gi|358413023|ref|XP_003582449.1| PREDICTED: semaphorin-6B [Bos taurus]
Length = 818
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 141/249 (56%), Gaps = 25/249 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVY---FAAT 249
AV + P R + T + VDV Q +F GT +++V+ A+
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVIFLGSEAGTVLKFLVWPNASASG 467
Query: 250 TTLRTVFVK 258
TT +VF++
Sbjct: 468 TTGPSVFLE 476
>gi|397497053|ref|XP_003846266.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Pan paniscus]
Length = 685
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G F+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAXFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWIVR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|440905932|gb|ELR56249.1| Semaphorin-6B, partial [Bos grunniens mutus]
Length = 621
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 141/249 (56%), Gaps = 25/249 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVY---FAAT 249
AV + P R + T + VDV Q +F GT +++V+ A+
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVIFLGSEAGTVLKFLVWPNASASG 467
Query: 250 TTLRTVFVK 258
TT +VF++
Sbjct: 468 TTGPSVFLE 476
>gi|292616794|ref|XP_002663156.1| PREDICTED: semaphorin-6B [Danio rerio]
Length = 921
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 13/208 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LK
Sbjct: 185 EPYFVSAVEWGPHVYFFFREMAMEFNYLEKVVVSRVARVCKADQGGSQRVLEKQWTSFLK 244
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCSIPG+ FYFN + I ++ G D VF+T + + GSA+C+F +E +
Sbjct: 245 ARLNCSIPGDSHFYFNLLHSTSPIIRMHGRDI-ILAVFSTPSNSIPGSAVCAFDMEQLAG 303
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV +P+PRPG C N + + PD +L F+++HPLMD
Sbjct: 304 VFDGRFKEQKSPESIWTPVPDEALPKPRPGGCAVQGSKFNSSNSFPDDMLTFVKTHPLMD 363
Query: 205 EAVAHRDNKPVFYRRDLLF--THLVVDV 230
EAV +P R + + +VVD
Sbjct: 364 EAVPSLGQRPWIVRTMVRYQLNKMVVDT 391
>gi|390359452|ref|XP_003729485.1| PREDICTED: semaphorin-6D [Strongylocentrotus purpuratus]
Length = 865
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/257 (42%), Positives = 142/257 (55%), Gaps = 25/257 (9%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S+D+G +V FFFRE AVEY + G +V+SRV +VCK D GG I + W T+ K R
Sbjct: 219 PAFVKSFDVGDWVMFFFREVAVEYTS-GDAVYSRVGKVCKSDEGGDWISAGQWTTFQKIR 277
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF-V 153
LNCS PG FPFYFN +QD++ V DDT FYGVFTT + GSA+C FS+ I
Sbjct: 278 LNCSFPGAFPFYFNFLQDVHMVETEDDTLFYGVFTTGRHEIPGSAVCVFSLNTIRTIMDE 337
Query: 154 GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
G+FKEQ AW P +S PRPG C +++ P S L +I SHPLM E+V + N
Sbjct: 338 GEFKEQ--QGGAWYP--ASPPTSPRPGLCDLGSQSSP-STLQWIASHPLMHESVPNHGNP 392
Query: 214 -PVF--YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVK-------VR 260
PVF R D T ++V + +Y V F T L+ V V+
Sbjct: 393 LPVFDLTRADYRLTQIMV----HSHKAVDKDYQVLFLGTDDSKLLKVVVVEGEGGAVHAN 448
Query: 261 LLQDVSNTSDSICESSV 277
LL+++S CE V
Sbjct: 449 LLEEISLHPADSCERVV 465
>gi|431922324|gb|ELK19415.1| Semaphorin-6B [Pteropus alecto]
Length = 1008
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 137/239 (57%), Gaps = 24/239 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K+V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKAVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLM+E
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNTSSAFPDEILNFVKTHPLMEE 407
Query: 206 AVAHRDNKPVFYR---RDLLFTHLVVDVV------QYEVF-----GTTSEYIVYFAATT 250
AV + P R R L T + VDV Q VF GT +++V+ A+T
Sbjct: 408 AVPSLGHAPWIVRTLTRHQL-TRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVWPNAST 465
>gi|410651510|ref|NP_001258599.1| semaphorin-5A [Danio rerio]
Length = 1048
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG++VFSR ARVCK D GG+ +L W T++KA
Sbjct: 194 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 252
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I + F G
Sbjct: 253 RLNCSRPGEIPFNYNELQGTFFLP-ELELLYGIFTTNVNSIAASAVCAFNLSAITQVFSG 311
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN TE FI LM E
Sbjct: 312 PFKYQENSRSAWLP-----YPNPNPDFQCGTIDFGSYVNLTERNLQDAQKFI----LMHE 362
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F ++ F+H+ VDVVQ
Sbjct: 363 VVQPVVPVPYFMEDNVRFSHVAVDVVQ 389
>gi|359322259|ref|XP_003639814.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Canis lupus
familiaris]
Length = 783
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 299 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDLGGSPRVLEKQWTSFLK 358
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 359 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 418
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 419 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 478
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 479 AVPSLGHAPWIVRTLMRHQLTRVAVDV 505
>gi|348549980|ref|XP_003460811.1| PREDICTED: semaphorin-6B-like [Cavia porcellus]
Length = 1104
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 140/249 (56%), Gaps = 25/249 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 467 EPYFVHAVQWRSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDLGGSPRVLEKQWTSFLK 526
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 527 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMRQVAAV 586
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNFI++HPLMDE
Sbjct: 587 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCATPGSQYNASSALPDEILNFIKTHPLMDE 646
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDVV------QYEVF-----GTTSEYIVYFAAT--- 249
AV + P R + T + VDV Q VF GT +++V+ A+
Sbjct: 647 AVPSLGHAPWIVRTLMRHQLTRVAVDVGAGPWGNQTVVFLGSEMGTVLKFLVWPNASVAG 706
Query: 250 TTLRTVFVK 258
TT +VF++
Sbjct: 707 TTGPSVFLE 715
>gi|351711688|gb|EHB14607.1| Semaphorin-6B [Heterocephalus glaber]
Length = 888
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + +V+FFFRE A+E+ K V SRVARVC D GG +L + W ++LK
Sbjct: 227 EPYFVHAVQWRSHVYFFFREIAMEFNYLEKVVVSRVARVCTNDVGGSPRVLEKQWTSFLK 286
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G GVF+T + + GSA+C+F + +
Sbjct: 287 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLGVFSTPSNSIPGSAVCAFDMRHVAAV 346
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNFI++HPLMDE
Sbjct: 347 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGSQYNASSALPDEILNFIKTHPLMDE 406
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR V
Sbjct: 407 AVPSLGHAPWIVR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEVGTVLKFLVRPNASV 464
Query: 266 SNTS 269
+ TS
Sbjct: 465 AGTS 468
>gi|317419854|emb|CBN81890.1| Semaphorin-5A [Dicentrarchus labrax]
Length = 1108
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 133/234 (56%), Gaps = 28/234 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG++VFSR RVCK D GG+ +L W T++KA
Sbjct: 224 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSRAGRVCKNDIGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I + F G
Sbjct: 283 RLNCSRPGEIPFNYNELQGTFYLP-ELELLYGIFTTNVNSIAASAVCAFNLSAISQVFNG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN TE F+ LM E
Sbjct: 342 PFKYQENSRSAWLP-----YPNPNPDFQCGTIDSGSYVNLTERNLQDAQKFL----LMHE 392
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYE--VFGTTSEYIVYFAAT-TTLRTVF 256
V P F ++ FTH+ VDVVQ + +F +I+Y A T+R V
Sbjct: 393 VVQPVVPVPYFMEDNVRFTHVAVDVVQGKDMLF-----HIIYLATDYGTIRKVL 441
>gi|47228364|emb|CAG07759.1| unnamed protein product [Tetraodon nigroviridis]
Length = 778
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 164/328 (50%), Gaps = 50/328 (15%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV S + G +++FFFRE A+E+ + K + SRVARVCK D GG + +L + W T+LK
Sbjct: 204 EPYFVSSMEWGPHIYFFFREMAMEFHHLEKVMVSRVARVCKADLGGSQRVLEKQWTTFLK 263
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTS------------------- 131
ARLNCS+PG+ FYFN + DI + G D G+F+T
Sbjct: 264 ARLNCSVPGDSHFYFNLLHATSDIIHMQGRDV-ILGLFSTPPNRHAATQRPGWKERGPVC 322
Query: 132 -------TTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV- 183
++ + GSA+C F ++ + R F G+FKEQ + S W PV VP+PRPG C
Sbjct: 323 PYGCLLVSSSIPGSAVCVFDMQQLARVFEGRFKEQKSPESIWTPVPDEAVPKPRPGGCAV 382
Query: 184 -----NDTETLPDSVLNFIRSHPLMDEAVAHRDNKP--VFYRRDLLFTHLVVDVVQYE-- 234
+ + TLPD VLNF+++HPLMDE V ++P V T +VVD
Sbjct: 383 QGSRFSSSTTLPDEVLNFVKTHPLMDETVPLLGHRPWVVKTMGRYQLTAMVVDTEAGPHK 442
Query: 235 -----VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSIC--ESSVGRLKQTVTWG 287
G+T I+ F + +V L++V + C +S R ++T
Sbjct: 443 NRTVLFLGSTRGTILKFLMIPSGDSVSHSSVFLEEVEGFNPEKCGEDSPQARQLLSLTLD 502
Query: 288 QSVHLSCFVKLPASMANQPMSWYH-YSK 314
++ H + + PA + P S H YS+
Sbjct: 503 RTSH-TLLLAFPACLIRMPTSRCHLYSR 529
>gi|410950209|ref|XP_004001683.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Felis catus]
Length = 606
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 121/207 (58%), Gaps = 11/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF++ HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKXHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDL--LFTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDV 434
>gi|207667288|gb|ACI25101.1| semaphorin 5a, partial [Danio rerio]
Length = 959
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG++VFSR ARVCK D GG+ +L W T++KA
Sbjct: 105 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 163
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ + + F G
Sbjct: 164 RLNCSRPGEIPFNYNELQGTFFLP-ELELLYGIFTTNVNSIAASAVCAFNLSAVTQVFSG 222
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN TE FI LM E
Sbjct: 223 PFKYQENSRSAWLP-----YPNPNPDFQCGTIDFGSYVNLTERNLQDAQKFI----LMHE 273
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F ++ F+H+ VDVVQ
Sbjct: 274 VVQPVVPVPYFMEDNVRFSHVAVDVVQ 300
>gi|432116851|gb|ELK37438.1| Semaphorin-6B [Myotis davidii]
Length = 655
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 13/208 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 264 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 323
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G +F+T + + GSA+C+F + +
Sbjct: 324 ARLNCSVPGDSHFYFNVMQAVTGVVSLGGRPIVLAIFSTPSNSIPGSAVCAFDMTQVAAV 383
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 384 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 443
Query: 206 AVAHRDNKPVFYR---RDLLFTHLVVDV 230
AV + P R R L T + VDV
Sbjct: 444 AVPSLGHAPWIVRTLTRHQL-TRVAVDV 470
>gi|125826377|ref|XP_684379.2| PREDICTED: semaphorin-5B [Danio rerio]
Length = 1185
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 20/238 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +YD+G + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L W T+ KA
Sbjct: 322 EPHFISAYDVGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFTKA 380
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C++++ I +AF G
Sbjct: 381 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAYNLSAITQAFNG 439
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC-----VNDTETLPDSVLNFIRSHPLMDEAVA 208
F+ Q S WLP P P P QC E L + L + LM++ V
Sbjct: 440 PFRSQENPRSTWLP-----TPNPIPNFQCGTIDEEGPNERLTERSLQDAQRLFLMNDVVQ 494
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQ 263
P+ ++ D+ F+ LVVD+VQ G S + V + T T L+ + + LQ
Sbjct: 495 PVSVDPLVWQDDVRFSKLVVDIVQ----GQDSLHHVMYIGTEYGTILKALATTNKSLQ 548
>gi|195020364|ref|XP_001985180.1| GH16920 [Drosophila grimshawi]
gi|193898662|gb|EDV97528.1| GH16920 [Drosophila grimshawi]
Length = 1061
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 122/195 (62%), Gaps = 6/195 (3%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E+++CGK+++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 206 FVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQVLRDNWTSFLKARLN 265
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PG++P+YF+EIQ + + Y F+TS + + GSA+C++++ I AF G FK
Sbjct: 266 CSLPGDYPYYFDEIQGMTYAESEHV-LYATFSTSGSSIFGSAVCAYNLSSINAAFEGAFK 324
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q S +AW V P+ QC + +L R + LMD+A+ +P+++
Sbjct: 325 HQEHSDAAWKTV---NTPQRSQFQCASGATAF-GHLLESSR-YQLMDQAIQPIGAQPLYH 379
Query: 218 RRDLLFTHLVVDVVQ 232
R F H+ +D+VQ
Sbjct: 380 SRLERFKHIALDIVQ 394
>gi|444715437|gb|ELW56305.1| Semaphorin-3A [Tupaia chinensis]
Length = 611
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 159/318 (50%), Gaps = 44/318 (13%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 202 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 261
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 262 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 321
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 322 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 380
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSIC 273
+ D+ FT +VVD V E +Y V F T ++ R++ V N+
Sbjct: 381 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDNHHGHSLEERIIYGVENS----- 431
Query: 274 ESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD 333
S L C K + + + ++ + + + + R D+ I +
Sbjct: 432 ---------------STFLECSPK-----SQRALVYWQFQRRNEERKEEIRVDEHIIRTE 471
Query: 334 GGLVIMAVEELDAGKYDC 351
GL++ +++ D+G Y C
Sbjct: 472 QGLLLRSLQRKDSGNYLC 489
>gi|348534869|ref|XP_003454924.1| PREDICTED: semaphorin-5B [Oreochromis niloticus]
Length = 1103
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 18/228 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +YDIG + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 235 EPHFISAYDIGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 293
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C+F++ I +AF G
Sbjct: 294 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAFNLSAITQAFNG 352
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--VND---TETLPDSVLNFIRSHPLMDEAVA 208
F+ Q S WLP P P QC ++D + L + L + LM++ V
Sbjct: 353 PFRTQENPRSTWLP-----TPNPIHNFQCGTIDDKGLNQGLTERSLQDAQRLYLMNDVVQ 407
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT 251
P+ + D+ F++LVVD+VQ + V ++EY A T
Sbjct: 408 PESIDPLVMQDDVRFSNLVVDIVQGMDTLFHVMYISTEYGTILKALAT 455
>gi|355718504|gb|AES06290.1| semaphorin 6B isoform 3 precursor [Mustela putorius furo]
Length = 388
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 115/193 (59%), Gaps = 9/193 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 187 EPYFVHAVEWASHIYFFFREIAMEFNYLEKVVVSRVARVCKNDLGGSPRVLEKQWTSFLK 246
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 247 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 306
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 307 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 366
Query: 206 AVAHRDNKPVFYR 218
AV + P R
Sbjct: 367 AVPSLGHAPWIVR 379
>gi|340725614|ref|XP_003401163.1| PREDICTED: semaphorin-5A-like [Bombus terrestris]
Length = 1113
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 132/225 (58%), Gaps = 19/225 (8%)
Query: 28 HRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H+YD+ P FVGS++ +V+F FRE+AVEYINCGK V+SR+ARVCK D GGK ++
Sbjct: 219 HQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKVYSRIARVCKNDRGGKIMMK 278
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSI 145
+ W T+ KARLNCS+PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++
Sbjct: 279 EVWTTFSKARLNCSLPGEFPFYYDEIQGAVYHP-EEGIVYATFTTPINGIAGSAICAFNM 337
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPG-----QCVNDTETLPDSVLNFIRSH 200
I +F G FK Q S +AW E RP +C ++ P +++ R +
Sbjct: 338 SAITASFNGPFKHQENSGAAW---------ERRPSHHNRQRCGSNANVAPHQIIDNQR-Y 387
Query: 201 PLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVF-GTTSEYIV 244
LMD+A+ +P+ FT + +DV ++ G T Y+
Sbjct: 388 QLMDDAIQSTTLEPLHTALLERFTLIALDVTPTKLHRGVTVLYVA 432
>gi|195089576|ref|XP_001997484.1| GH23279 [Drosophila grimshawi]
gi|193906008|gb|EDW04875.1| GH23279 [Drosophila grimshawi]
Length = 850
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 122/195 (62%), Gaps = 6/195 (3%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E+++CGK+++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 22 FVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQVLRDNWTSFLKARLN 81
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PG++P+YF+EIQ + + Y F+TS + + GSA+C++++ I AF G FK
Sbjct: 82 CSLPGDYPYYFDEIQGMTYAESEHV-LYATFSTSGSSIFGSAVCAYNLSSINAAFEGAFK 140
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q S +AW V P+ QC + +L R + LMD+A+ +P+++
Sbjct: 141 HQEHSDAAWKTV---NTPQRSQFQCASGATAF-GHLLESSR-YQLMDQAIQPIGAQPLYH 195
Query: 218 RRDLLFTHLVVDVVQ 232
R F H+ +D+VQ
Sbjct: 196 SRLERFKHIALDIVQ 210
>gi|350404059|ref|XP_003486993.1| PREDICTED: semaphorin-5A-like [Bombus impatiens]
Length = 1120
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 132/225 (58%), Gaps = 19/225 (8%)
Query: 28 HRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H+YD+ P FVGS++ +V+F FRE+AVEYINCGK V+SR+ARVCK D GGK ++
Sbjct: 226 HQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKVYSRIARVCKNDRGGKIMMK 285
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSI 145
+ W T+ KARLNCS+PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++
Sbjct: 286 EVWTTFSKARLNCSLPGEFPFYYDEIQGAVYHP-EEGIVYATFTTPINGIAGSAICAFNM 344
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPG-----QCVNDTETLPDSVLNFIRSH 200
I +F G FK Q S +AW E RP +C ++ P +++ R +
Sbjct: 345 SAITASFNGPFKHQENSGAAW---------ERRPSHHNRQRCGSNANVAPHQIIDNQR-Y 394
Query: 201 PLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVF-GTTSEYIV 244
LMD+A+ +P+ FT + +DV ++ G T Y+
Sbjct: 395 QLMDDAIQSTTLEPLHTALLERFTLIALDVTPTKLHRGVTVLYVA 439
>gi|207667296|gb|ACI25105.1| semaphorin 6bb, partial [Danio rerio]
Length = 296
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 117/193 (60%), Gaps = 11/193 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKA 94
P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LKA
Sbjct: 105 PYFVSAVEWGPHVYFFFREMAMEFNYLEKVVVSRVARVCKADQGGSQRVLEKQWTSFLKA 164
Query: 95 RLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCSIPG+ FYFN + I ++ D VF+T + + GSA+C+F +E +
Sbjct: 165 RLNCSIPGDSHFYFNLLHSTSPIIRMHSRDI-ILAVFSTPSNSIPGSAVCAFDMEQLAGV 223
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+FKEQ + S W PV +P+PRPG C N + + PD +L F+++HPLMDE
Sbjct: 224 FDGRFKEQKSPESIWTPVPDEALPKPRPGGCAVQGSKFNSSNSFPDDMLTFVKTHPLMDE 283
Query: 206 AVAHRDNKPVFYR 218
AV +P R
Sbjct: 284 AVPSLGQRPWIVR 296
>gi|395512859|ref|XP_003760651.1| PREDICTED: semaphorin-6B [Sarcophilus harrisii]
Length = 747
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 124/226 (54%), Gaps = 11/226 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 235 EPYFIHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 294
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + G +F+T + + GSA+C+F + +
Sbjct: 295 ARLNCSVPGDSHFYFNVLQAATGILNLGGRPVILALFSTPSNSIPGSAVCAFDMGQVAAV 354
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV VP+PRPG C N + PD +LNF+++HPLMDE
Sbjct: 355 FEGRFREQKSPESIWTPVPEELVPKPRPGLCAAPGMPYNASSAFPDEILNFVKTHPLMDE 414
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
AV + P R L H + V G V F + T
Sbjct: 415 AVPSLGHAPWIVR--TLARHQLTRVAVDTSAGPWGNQTVVFLGSDT 458
>gi|390358028|ref|XP_785925.3| PREDICTED: semaphorin-5B-like, partial [Strongylocentrotus
purpuratus]
Length = 1053
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 127/220 (57%), Gaps = 16/220 (7%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV SY+IG YV+FFFRETAVE+ NCG+ ++SRVARVCK D GG +L +NW T+ KAR
Sbjct: 242 PNFVASYEIGPYVYFFFRETAVEFSNCGQIIYSRVARVCKSDNGGNFLLEENWTTFRKAR 301
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCSIPG+ PF FNEI+ Y + Y VF+T + + GSA+C+F++E I AF G
Sbjct: 302 LNCSIPGKIPFSFNEIESTY-YDNETGIIYTVFSTPSNSIHGSAVCAFTLEAINEAFSGP 360
Query: 156 FKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETL--PDSVLNFI---RSHPLMDEAVAHR 210
F Q + SAW+ P P C +L P + ++ + + LM ++V
Sbjct: 361 FTFQPNAASAWI-----TKPNSSPEGCSEVQSSLIRPGQIDRYLVDAQRYQLMYKSVEPV 415
Query: 211 DNKPVF-YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+F + + +VVD VQ G Y V F T
Sbjct: 416 SGRPLFVHGQKTRLDRIVVDTVQ----GRDKVYTVIFVGT 451
>gi|322784361|gb|EFZ11332.1| hypothetical protein SINV_00893 [Solenopsis invicta]
Length = 1147
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 131/223 (58%), Gaps = 19/223 (8%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVGS++ +V+F FRE+AVEYINCGK ++SR+ARVCK D GG+ ++ W T+ KAR
Sbjct: 252 PQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQIMMKDVWTTFSKAR 311
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++ + +F G
Sbjct: 312 LNCSLPGEFPFYYDEIQGAAYHP-EEGIIYATFTTPINGIAGSAICAFNMSAVFVSFNGP 370
Query: 156 FKEQATSTSAWLPVLSSRVPEPRP------GQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
FK Q + +AW E RP +C + + T P +++ R + LMDEAV
Sbjct: 371 FKYQENAGAAW---------ERRPVAHHNRQRCGSPSSTAPHQIMDNQR-YQLMDEAVQS 420
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
+P+ F H+ VDV ++ + + ++Y + T L
Sbjct: 421 TMLEPLHTATLERFIHIAVDVTPTKLHRSVT--VLYVSTATGL 461
>gi|332263145|ref|XP_003280614.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Nomascus leucogenys]
Length = 877
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 128/244 (52%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G ++ + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDXHFYFNVLQAVTGVVSLGGXXXXXQTLSSQPLSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWIVR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>gi|324503384|gb|ADY41474.1| Semaphorin-1A [Ascaris suum]
Length = 715
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 118/186 (63%), Gaps = 5/186 (2%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+F++RE A E + + V++RVARVCK D GG W +++KAR
Sbjct: 223 PNFVASFAYGAHVYFWYREWAAEATDGDRQVYARVARVCKGDRGGARPAHDRWTSFVKAR 282
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGDD--TKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
LNCS PG+ PFYFNE+Q + + VP D T Y VFTT + + SA+C+F +E I+R F
Sbjct: 283 LNCSYPGKTPFYFNELQAVTEPVPAGDGSTIVYAVFTTPQSIVRMSAVCAFRMEAIKRVF 342
Query: 153 -VGKFKEQATSTSAWLPVLSSR-VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
G FK Q ++ S W+P S + + PRPG CV D+ LP+S ++FI +PLM EAV
Sbjct: 343 DYGHFKVQQSAQSLWMPYRSHQMISVPRPGSCVADSSKLPESTVSFITRNPLMHEAVPAT 402
Query: 211 DNKPVF 216
+P+
Sbjct: 403 HPRPIL 408
>gi|449272107|gb|EMC82195.1| Semaphorin-6D [Columba livia]
Length = 1091
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 120/196 (61%), Gaps = 23/196 (11%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT S++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIEINGVPT-VVGVFTTQLN----------SMDDIEK 328
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 329 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 388
Query: 203 MDEAVAHRDNKPVFYR 218
MD AV +P F +
Sbjct: 389 MDSAVPSVIEEPWFTK 404
>gi|402871141|ref|XP_003899540.1| PREDICTED: semaphorin-5A [Papio anubis]
Length = 1074
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAIC-SFSIEDIERAFV 153
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + C + I +AF
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVDQIASRLSCVHLQLSAIAQAFA 332
Query: 154 GKFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMD 204
G FK Q S SAWLP P P P QC VN TE FI LM
Sbjct: 333 GPFKYQENSRSAWLP-----YPNPNPNFQCGTVDQGLYVNLTERNLQDAQKFI----LMH 383
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
E V P F + F+H+ VDVVQ
Sbjct: 384 EVVQPVTTVPSFMEDNSRFSHVAVDVVQ 411
>gi|47215171|emb|CAG01437.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 144/268 (53%), Gaps = 39/268 (14%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEY-------INCGKS-----------------VFSRV 70
+P FV + + G +++FFFRE A+E+ I K+ V SRV
Sbjct: 103 EPYFVSAVEWGPHIYFFFREIAMEFNYLEKLFIKSLKTRSFYLPANFPVPEQTQVVVSRV 162
Query: 71 ARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYG 126
ARVCKRD GG + +L + W ++LKARLNCS+PG+ FYFN + I ++ G D G
Sbjct: 163 ARVCKRDRGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHSTSPIIRMHGRDI-ILG 221
Query: 127 VFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--- 183
VF+T + GSA+C+F +E + F G+FKEQ + S W PV +P+PRPG C
Sbjct: 222 VFSTPANSIPGSAVCAFDMEQLAGVFDGRFKEQKSPESIWTPVADEAIPKPRPGGCAVQG 281
Query: 184 ---NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTS 240
N + + PD +LNF+++HPLMDEAV +P + R ++ L VV E +
Sbjct: 282 SRFNSSNSFPDEMLNFVKTHPLMDEAVPSLGQRP-WIVRTMVRYQLNKIVVDTEAGPHRN 340
Query: 241 EYIVYFAATTTLRTVFVKVRLLQDVSNT 268
+V+ ++ R +K ++ + NT
Sbjct: 341 RTVVFLGSS---RGTILKFLIMPNQDNT 365
>gi|7407967|gb|AAF60253.2| semaphorin-2a [Caenorhabditis elegans]
Length = 658
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 6/197 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++VFFFFRE A + + V SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 213 EPQFVGSFDVGQHVFFFFREIAHDNSFGERIVHSRVARVCKKDIGGRNVLRQVWTSFVKA 272
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 273 RLNCSVSANFPFYFDHIQSVKRVDKHGETYFYATFSTSETAFTSSAICMFQLSSINHLLD 332
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C ++ ++ D+ L+F ++H L+ ++++
Sbjct: 333 TGLLMEE--TANGQFSVTADEIPAHRPGTCSQNSHSISDTDLHFAKTHLLVSDSIS--GG 388
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD +FTH+VVD
Sbjct: 389 TPILPLRDHVFTHIVVD 405
>gi|17508413|ref|NP_490875.1| Protein MAB-20, isoform a [Caenorhabditis elegans]
gi|75020111|sp|Q95XP4.1|SEM2A_CAEEL RecName: Full=Semaphorin-2A; Short=Sema-2a; AltName: Full=Protein
male abnormal 20; Flags: Precursor
gi|373219435|emb|CCD67974.1| Protein MAB-20, isoform a [Caenorhabditis elegans]
Length = 658
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 6/197 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++VFFFFRE A + + V SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 213 EPQFVGSFDVGQHVFFFFREIAHDNSFGERIVHSRVARVCKKDIGGRNVLRQVWTSFVKA 272
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 273 RLNCSVSANFPFYFDHIQSVKRVDKHGETYFYATFSTSETAFTSSAICMFQLSSINHLLD 332
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C ++ ++ D+ L+F ++H L+ ++++
Sbjct: 333 TGLLMEE--TANGQFSVTADEIPAHRPGTCSQNSHSISDTDLHFAKTHLLVSDSIS--GG 388
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD +FTH+VVD
Sbjct: 389 TPILPLRDHVFTHIVVD 405
>gi|363743770|ref|XP_425890.3| PREDICTED: semaphorin-6B, partial [Gallus gallus]
Length = 892
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 128/227 (56%), Gaps = 13/227 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LK
Sbjct: 216 EPYFVHAVEWRSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSQRVLEKQWTSFLK 275
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN I DI ++ G VF+T T + GSA+C+F + +
Sbjct: 276 ARLNCSVPGDSHFYFNVIHAVTDILELNGRPV-VLAVFSTPTNSIPGSAVCAFDMTQVAA 334
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+F+EQ + S W V VP+PRPG C N + T PD +L F+++HPLMD
Sbjct: 335 VFEGRFREQKSPESIWTAVPEDMVPKPRPGCCAAPGMRYNSSSTFPDEILTFVKTHPLMD 394
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
EAV N P R + + + +V G + V F ++T
Sbjct: 395 EAVPSLGNAPWIVR--TMSRYQLRKIVVDNAAGPWGNHTVVFLGSST 439
>gi|348536926|ref|XP_003455946.1| PREDICTED: semaphorin-5B-like [Oreochromis niloticus]
Length = 1092
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 18/228 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FV Y+IG++ +FF RETAVE +CGK VFSRVARVCK D GG+ +L W T++KA
Sbjct: 223 EPHFVSVYEIGRFAYFFLRETAVEN-DCGKMVFSRVARVCKNDMGGRFLLEDTWTTFMKA 281
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C+F++ I +AF G
Sbjct: 282 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSISASAVCAFNLSAITQAFNG 340
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTE-----TLPDSVLNFIRSHPLMDEAVA 208
F+ Q +AWL P P P QC E L + L + LM++ V
Sbjct: 341 PFRYQENPRTAWL-----STPNPIPNFQCGTLEEGANGGNLTERSLQDAQRLFLMNDVVQ 395
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT 251
P+ + +L F+ LVVD+VQ Y V +EY A +T
Sbjct: 396 PVTVNPLLTQDNLRFSKLVVDIVQGRHSLYHVMYIGTEYGTILKALST 443
>gi|157116984|ref|XP_001652919.1| semaphorin [Aedes aegypti]
gi|108876241|gb|EAT40466.1| AAEL007804-PA, partial [Aedes aegypti]
Length = 1026
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVGS++ G++V+F FRE AVEYINCGK V+SR+AR+CK D GG IL NW +++KAR
Sbjct: 144 PQFVGSFEHGEFVYFVFREAAVEYINCGKIVYSRIARICKNDPGGTQILKDNWTSFVKAR 203
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PG++PFYFNE+Q + ++ Y FTT + GSAIC+F++ I AF G
Sbjct: 204 LNCSLPGDYPFYFNEVQGMV-YSQEEGILYATFTTPENSIHGSAICAFNMSAIHTAFSGA 262
Query: 156 FKEQATSTSAWLPVLSSRVP--EPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
FK Q + SAW + E G + S + LMD+AV +
Sbjct: 263 FKYQESLGSAWHRQDAQHRDHFECHAGPTARHVSLIDSS------KYQLMDQAVQPIIGQ 316
Query: 214 PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
P+ Y + F H+ +DV+ ++ +++Y A L
Sbjct: 317 PLHYTKLERFNHIAIDVIPTKLHERV--HVIYVATDAGL 353
>gi|432850539|ref|XP_004066803.1| PREDICTED: semaphorin-5B-like [Oryzias latipes]
Length = 1089
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 130/232 (56%), Gaps = 20/232 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FV SY IG + +FF RE+AVE +CGK VFSRVARVCK D GG+ +L W T++KA
Sbjct: 220 EPHFVSSYGIGPFAYFFLRESAVEN-DCGKMVFSRVARVCKNDMGGRFLLEDTWTTFMKA 278
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ L SA+C+F++ I AF G
Sbjct: 279 RLNCSRSGEIPFYYNELQSTFHLPEQDL-IYGVFTTNVNSLSASAVCAFNLSAITLAFNG 337
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLP-----DSVLNFIRSHPLMDEAVA 208
F+ Q +AWL P P P QC E P + L + LM++ V
Sbjct: 338 AFRYQENPRTAWL-----STPNPIPNFQCGTLEEDGPGGNLTERSLQDAQRLFLMNDVVQ 392
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEY--IVYFAATTTLR 253
P+ + ++ F+ LVVD+VQ Y V +EY I+ ATT R
Sbjct: 393 PATINPLLTQDNVRFSRLVVDIVQGKDALYHVMYIATEYGTILKALATTNKR 444
>gi|195379490|ref|XP_002048511.1| GJ14011 [Drosophila virilis]
gi|194155669|gb|EDW70853.1| GJ14011 [Drosophila virilis]
Length = 1098
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 137/232 (59%), Gaps = 10/232 (4%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E+++CGK+++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 237 FVGSFEAGNFVYFLLRESAAEHMSCGKAIYSRIARVCKNDAGGDQVLRDNWTSFLKARLN 296
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PG++P+YF+EIQ + + Y F+TS + + GSA+C++++ I AF G F+
Sbjct: 297 CSLPGDYPYYFDEIQGMTYAESEHV-LYATFSTSGSSIFGSAVCAYNLSSINAAFEGAFR 355
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q + + W V P+ QC + +L R + LMD+A+ +P+++
Sbjct: 356 HQEHADAPWKTV---NTPQRSQFQCASGATAF-GHLLESSR-YQLMDQAIQPIGAQPLYH 410
Query: 218 RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT-LRTVFVKVRLLQDVSNT 268
R F H+ +D+VQ T +++Y +++ ++ + VK Q + T
Sbjct: 411 SRLERFKHIALDIVQTR---TEQLHVLYVSSSDNHIKKLSVKYGQQQGRTQT 459
>gi|345493255|ref|XP_001603820.2| PREDICTED: semaphorin-5A-like [Nasonia vitripennis]
Length = 1036
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 11/231 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVGS+D YV+F FRE+AVEYINCGK ++SR+AR+CK D G I+ W T+ KAR
Sbjct: 152 PQFVGSFDTDDYVYFLFRESAVEYINCGKRIYSRIARICKYDP-GSTIIKDVWTTFNKAR 210
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PGEFPFY++EIQ + P ++ Y FTT + + GSAIC+F++ I AF G
Sbjct: 211 LNCSLPGEFPFYYDEIQGMAYQP-EEGLVYATFTTPSNAIAGSAICAFNMSSIAAAFDGP 269
Query: 156 FKEQATSTSAW--LPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
+K Q + +AW V S + P D + D L + LMDEAV +
Sbjct: 270 YKHQESPGAAWERKHVASHSQYKCGPNSGSGDRQQPRDDYLRYQ----LMDEAVQSVTPR 325
Query: 214 PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL-RTVFVKVRLLQ 263
P+ FTH+ VD+ +V + + ++Y A T L + + V R L+
Sbjct: 326 PLHTATLERFTHIAVDLTPTKVHRSVA--VLYVATTEGLIKKISVLPRNLE 374
>gi|432927861|ref|XP_004081063.1| PREDICTED: semaphorin-5A-like [Oryzias latipes]
Length = 1078
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/207 (42%), Positives = 121/207 (58%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDI + +FFFRE AVE+ +CG++VFSRV RVCK D GG+ +L W T++KA
Sbjct: 224 EPNFVSSYDIANFTYFFFRENAVEH-DCGRTVFSRVGRVCKNDIGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
R+NCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I + F G
Sbjct: 283 RMNCSRPGEIPFNYNELQGTFYLP-ELELLYGIFTTNVNSIAASAVCAFNLSAISQVFNG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P G VN T+ F+ LM +
Sbjct: 342 PFKYQENSRSAWLP-----YPNPNPDFKCGTINSGTYVNLTQRNLQDAQKFL----LMHD 392
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F ++ FTH+ VDVVQ
Sbjct: 393 VVQPVVPVPYFMEDNVRFTHVAVDVVQ 419
>gi|355718519|gb|AES06295.1| sema domain, transmembrane domain , and cytoplasmic domain, 6D
[Mustela putorius furo]
Length = 186
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 117/184 (63%), Gaps = 17/184 (9%)
Query: 51 FFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFN 109
FFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LKARLNCS+PG+ FYF+
Sbjct: 1 FFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFD 60
Query: 110 EIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAW 166
+Q DI ++ G T GVFTT + GSA+C+FS++DIE+ F G+FKEQ T S W
Sbjct: 61 VLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVW 119
Query: 167 LPVLSSRVPEPRPGQCVND--------TETLPDSVLNFI----RSHPLMDEAVAHRDNKP 214
V +VP+PRPG C + PD L FI +SHPLMD AV ++P
Sbjct: 120 TAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLAFIKSHPKSHPLMDSAVPPIADEP 179
Query: 215 VFYR 218
F +
Sbjct: 180 WFTK 183
>gi|321472248|gb|EFX83219.1| hypothetical protein DAPPUDRAFT_48390 [Daphnia pulex]
Length = 421
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 130/216 (60%), Gaps = 13/216 (6%)
Query: 37 DFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG---KNILSQNWATYLK 93
+FV S ++ ++VFFFFRE AVE NCGK+V+SRVARVCK D GG + + W T++K
Sbjct: 128 EFVASVEVDQFVFFFFREVAVEVSNCGKAVYSRVARVCKNDMGGGQQQRLKDSTWTTFVK 187
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV 153
ARLNCS+P E+PFY++ IQ + V ++ FY FTT+ + GSA+CSF+++ ++ +F
Sbjct: 188 ARLNCSVPAEYPFYYDHIQSVAYV-EEERLFYAAFTTAENSIAGSAVCSFTLDSMQESFA 246
Query: 154 GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
G FK Q++ S W V S+ C +D + S+L + LMD AV R K
Sbjct: 247 GPFKFQSSPNSTWESVNSTHA----HSHCNSDDPS--SSLLEAAGKYQLMDRAVPSRSGK 300
Query: 214 -PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAA 248
P+ + F H+ VDVV + +S +++Y A+
Sbjct: 301 GPLIQLHSVRFNHIAVDVVATK--NHSSIHVLYVAS 334
>gi|395506950|ref|XP_003757791.1| PREDICTED: semaphorin-4C [Sarcophilus harrisii]
Length = 832
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 123/220 (55%), Gaps = 24/220 (10%)
Query: 35 QPDFVGSYDIGKYV----------FFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V +FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSPTGDDDKIYFFFSERAVEYNCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL C+ P + YFN++Q ++ + GD +T F+GVF + SAIC
Sbjct: 272 QKKWTTFLKARLVCAAP-DRQLYFNQLQALHTLKGDNWLNTTFFGVFRARWGDVDLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +EDI+R F G +KE W P + VP PRPG C+N+ + LPD+
Sbjct: 331 QYQLEDIQRVFEGPYKEYQQQAQKWGPY-TDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
LNF + HPLM+ V R +P+ ++D FTHLV D V+
Sbjct: 390 TLNFAKKHPLMEGQVVPRWGRPLLVKKDTNFTHLVADQVK 429
>gi|345777254|ref|XP_538464.3| PREDICTED: semaphorin-4C [Canis lupus familiaris]
Length = 833
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIY---KVPGDDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNQLQALHTLQEASWHNTTFFGVFRARWGDVDMSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R N+P+ ++D FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWNRPLLVKKDTNFTHLVADRV 428
>gi|308497901|ref|XP_003111137.1| CRE-MAB-20 protein [Caenorhabditis remanei]
gi|308240685|gb|EFO84637.1| CRE-MAB-20 protein [Caenorhabditis remanei]
Length = 659
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++V FFFRE A + + V SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 213 EPQFVGSFDVGQHVLFFFREIAHDNSFGERIVHSRVARVCKKDIGGRNVLRQVWTSFVKA 272
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ +PFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 273 RLNCSVSANYPFYFDHIQSVKRVDKHGETFFYATFSTSETAFTSSAICMFQLSSINHLLD 332
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ S + V + +P RPG C +++ ++ D+ L+F ++H L+ ++++
Sbjct: 333 TGLLMEE--SANGQFSVTADEIPAHRPGTCSSNSHSISDTDLHFAKTHLLVSDSIS--GG 388
Query: 213 KPVFYRRDLLFTHLVVDVVQYE 234
P+ RD ++TH++VD +Q +
Sbjct: 389 TPILPLRDHVYTHIIVDQLQNQ 410
>gi|328783402|ref|XP_394067.3| PREDICTED: semaphorin-5A [Apis mellifera]
Length = 1107
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 132/227 (58%), Gaps = 9/227 (3%)
Query: 28 HRYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H+YD+ P FVGS++ +V+F FRE+AVEYINCGK ++SR+ARVCK D GG+ ++
Sbjct: 214 HQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQIMMR 273
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSI 145
+ W T+ KARLNCS+PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++
Sbjct: 274 EVWTTFSKARLNCSLPGEFPFYYDEIQGAVYHP-EEKIVYATFTTPINGIAGSAICAFNM 332
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDE 205
I +F G FK Q S +AW S R G N P +++ R + LMD+
Sbjct: 333 SAITASFNGPFKHQENSGAAWERRPVSHHNRQRCGSFAN---VAPHQIIDNQR-YQLMDD 388
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
AV +P+ FT + +DV ++ + + ++Y A L
Sbjct: 389 AVQSTTLEPLHTALLERFTLIALDVTPTKLHRSVT--VLYVATDVGL 433
>gi|195173105|ref|XP_002027335.1| GL15685 [Drosophila persimilis]
gi|194113178|gb|EDW35221.1| GL15685 [Drosophila persimilis]
Length = 980
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E++ CGK+++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 194 FVGSFEAGNFVYFLLRESAAEHMTCGKAIYSRIARVCKNDAGGGQLLRDNWTSFLKARLN 253
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PGE+P+YF+E+Q + + Y F TS + + GSA+C+F++ I AF G FK
Sbjct: 254 CSLPGEYPYYFDEVQGMTYAESEHV-LYATFRTSGSSIYGSAVCAFNLSSINEAFDGAFK 312
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q + +AW V P+ QC T +L R + LMD+AV +P+++
Sbjct: 313 HQEHADAAWTTV---NTPQRSQFQCAGGTTGF-GHLLESSR-YQLMDQAVQPIGAQPLYH 367
Query: 218 RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+ F + +D++ + T + V F A++
Sbjct: 368 SKLEQFGRIALDILNTK----TEQIHVLFVASS 396
>gi|198465403|ref|XP_002134967.1| GA23503 [Drosophila pseudoobscura pseudoobscura]
gi|198150144|gb|EDY73594.1| GA23503 [Drosophila pseudoobscura pseudoobscura]
Length = 1094
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E++ CGK+++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 234 FVGSFEAGNFVYFLLRESAAEHMTCGKAIYSRIARVCKNDAGGGQLLRDNWTSFLKARLN 293
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PGE+P+YF+E+Q + + Y F TS + + GSA+C+F++ I AF G FK
Sbjct: 294 CSLPGEYPYYFDEVQGMTYAESEHV-LYATFRTSGSSIYGSAVCAFNLSSINEAFDGAFK 352
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q + +AW V P+ QC T +L R + LMD+AV +P+++
Sbjct: 353 HQEHADAAWTTV---NTPQRSQFQCAGGTTGF-GHLLESSR-YQLMDQAVQPIGAQPLYH 407
Query: 218 RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+ F + +D++ + T + V F A++
Sbjct: 408 SKLEQFGRIALDILNTK----TEQIHVLFVASS 436
>gi|432863501|ref|XP_004070098.1| PREDICTED: semaphorin-3ab-like [Oryzias latipes]
Length = 781
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 136/246 (55%), Gaps = 29/246 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G Y I + ++ FFRE A+E + GK+V++R+ ++CK D GG L W
Sbjct: 226 PRFLGIYLIPENDNPEDDKIYLFFRENAMEGEHAGKAVYARIGQLCKNDLGGHRSLVNKW 285
Query: 89 ATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD++ + D K YG+FTTS+ GSA+C +
Sbjct: 286 TTFLKARLICSVPGSNGIDTHFDELQDVFVLSTKDPKSPLIYGIFTTSSNIFKGSAVCMY 345
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
S+ DI RAF+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 346 SMTDIRRAFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDTTKELPDEVVTF 404
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
RSHP M V +++P+ R D+ FT +VVD V+ E +Y V F T T
Sbjct: 405 ARSHPAMFNPVYPINHRPIIVRTDVDYQFTQIVVDKVEAE----DGQYDVMFIGTDMGTV 460
Query: 252 LRTVFV 257
L+ V +
Sbjct: 461 LKVVCI 466
>gi|351707688|gb|EHB10607.1| Semaphorin-4C [Heterocephalus glaber]
Length = 835
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 29/238 (12%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 216 EPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 275
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN ++ ++ + G +T F+GVF + SA+C
Sbjct: 276 QRKWTTFLKARLVCSAP-NWQLYFNHLRAVHTLRGASWHNTTFFGVFRARWGDVDLSAVC 334
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 335 EYQLEEIQRVFEGPYKEYREQAQKWA-RYTDPVPTPRPGSCINNWHRRHGYSSSLELPDN 393
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGT-TSEYIVYFAAT 249
LNFI+ HPLM+E VA R +P+ ++D FTHLVVD ++ G + Y V F T
Sbjct: 394 TLNFIKKHPLMEEQVAPRWGRPLLVKKDANFTHLVVD----QIMGLDEATYTVLFIGT 447
>gi|341891462|gb|EGT47397.1| hypothetical protein CAEBREN_28753 [Caenorhabditis brenneri]
Length = 651
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 6/202 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++V FFFRE A + + + SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 207 EPQFVGSFDVGQHVLFFFREIAHDNSFGERIIHSRVARVCKKDIGGRNVLRQVWTSFVKA 266
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ ++P+YF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 267 RLNCSVSADYPYYFDHIQSVKRVDKKGETFFYATFSTSETAFTSSAICMFQLNSINHVLD 326
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F E+ + V + +P RPG C +++ ++ D+ L+F + H L+ +A++
Sbjct: 327 TGLFMEE--DANGQFSVTADEIPAHRPGTCSSNSHSINDNDLHFAKLHLLVADAIS--GG 382
Query: 213 KPVFYRRDLLFTHLVVDVVQYE 234
P+ RD +FTH+ VD +Q +
Sbjct: 383 TPILPLRDHVFTHIAVDQLQNQ 404
>gi|444729753|gb|ELW70159.1| Semaphorin-5A [Tupaia chinensis]
Length = 1350
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 8/172 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 197 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 255
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 256 RLNCSRPGEVPFYYHELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 314
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P Q + P + + ++S M E
Sbjct: 315 PFKYQENSRSAWLP-----YPNPNPNFQVIAGVRGSPGNPMKDVKSCAEMME 361
>gi|380016324|ref|XP_003692137.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-5A-like [Apis florea]
Length = 1087
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 9/227 (3%)
Query: 28 HRYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H+YD+ P FVGS++ +V+F FRE+AVEYINCGK ++SR+ARVCK D GG+ ++
Sbjct: 196 HQYDSRWLNDPQFVGSFETEDHVYFLFRESAVEYINCGKKIYSRIARVCKNDRGGQIMMR 255
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSI 145
+ W T+ KARLNC +PGEFPFY++EIQ P ++ Y FTT G+ GSAIC+F++
Sbjct: 256 EVWTTFSKARLNCXLPGEFPFYYDEIQGAVYHP-EEKIVYATFTTPINGIAGSAICAFNM 314
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDE 205
I +F G FK Q S +AW S R G N P +++ R + LMD+
Sbjct: 315 SAITASFNGPFKHQENSGAAWERRPVSHHNRQRCGSFAN---VAPHQIIDNQR-YQLMDD 370
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
AV +P+ FT + +DV ++ + + I+Y A L
Sbjct: 371 AVQSTTLEPLHTALLERFTLIALDVTPTKLHRSVT--ILYVATDVGL 415
>gi|341878171|gb|EGT34106.1| hypothetical protein CAEBREN_31462 [Caenorhabditis brenneri]
Length = 634
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 6/202 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++V FFFRE A + + + SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 190 EPQFVGSFDVGQHVLFFFREIAHDNSFGERIIHSRVARVCKKDIGGRNVLRQVWTSFVKA 249
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ ++P+YF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 250 RLNCSVSADYPYYFDHIQSVKRVDKKGETFFYATFSTSETAFTSSAICMFQLNSINHVLD 309
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G F E+ + V + +P RPG C +++ ++ D+ L+F + H L+ +A++
Sbjct: 310 TGLFMEE--DANGQFSVTADEIPAHRPGTCSSNSHSINDNDLHFAKLHLLVADAIS--GG 365
Query: 213 KPVFYRRDLLFTHLVVDVVQYE 234
P+ RD +FTH+ VD +Q +
Sbjct: 366 TPILPLRDHVFTHIAVDQLQNQ 387
>gi|344306759|ref|XP_003422052.1| PREDICTED: semaphorin-4C [Loxodonta africana]
Length = 833
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 131/237 (55%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEYDCYAEQVVARVARVCKGDLGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ +FN++Q ++ + G +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLHFNQLQALHTLQGTSWHNTTFFGVFRARWGDVDLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRHHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM+E V R P+ ++D FTHLV D V + G T YIV F T
Sbjct: 390 TLNFIKKHPLMEEQVGPRWRHPLLVKKDTNFTHLVADRVA-GLDGIT--YIVLFIGT 443
>gi|242014732|ref|XP_002428039.1| Semaphorin-5A precursor, putative [Pediculus humanus corporis]
gi|212512558|gb|EEB15301.1| Semaphorin-5A precursor, putative [Pediculus humanus corporis]
Length = 1017
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 125/220 (56%), Gaps = 13/220 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS++ K+VFF FRE AVEYINCGK V+SR+ARVCK D GG+ +L W T+LKA
Sbjct: 151 EPQFVGSFETDKFVFFLFREAAVEYINCGKIVYSRIARVCKNDEGGQLLLKDKWTTFLKA 210
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS+PG++PFYF+EIQ + + Y FTT + GSAIC+F++ IE+AF G
Sbjct: 211 RLNCSLPGDYPFYFDEIQGM-AYNSEQKMVYATFTTPRNSIPGSAICAFNMSAIEQAFSG 269
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDN 212
FK Q +AW S +C P + I S + LMD AV
Sbjct: 270 PFKHQVHPGAAWEKDYSQNRDH---FEC-----EAPSLTRHLIDSSKYQLMDSAVQPITP 321
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
+P++ H+ VD + ++ T +++Y A + L
Sbjct: 322 QPLYNSNLETLIHISVDSLPTKLH--TDVHLLYVATSDGL 359
>gi|296222997|ref|XP_002807556.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Callithrix jacchus]
Length = 828
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 125/219 (57%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYIPESVGSFTGDDDKVYFFFRERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAP-DWQLYFNQLQAMHTLQDTSWHNTTFFGVFKAQWGDMYLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRHHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPL++E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLLEEQVRPRWSRPLLVKKGTNFTHLVADRV 428
>gi|47223515|emb|CAF98002.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1105
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 130/245 (53%), Gaps = 41/245 (16%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG+ VFSR RVCK D GG+ +L W T++KA
Sbjct: 229 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRMVFSRAGRVCKNDIGGRFLLEDTWTTFMKA 287
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTST------------TGLMGSAICS 142
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+
Sbjct: 288 RLNCSRPGEVPFNYNELQGTFYLP-ELELLYGIFTTNVWSPPLLLVSTYRNSIAASAVCT 346
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRP---------GQCVNDTETLPDSV 193
F++ I + F G FK Q S SAWLP P P P G VN TE
Sbjct: 347 FNLSAIAQVFRGPFKYQENSRSAWLP-----YPNPNPDFQCGTIDSGSYVNLTERNLQDA 401
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT--TT 251
F+ LM E V D P F + FTH+ VDVVQ G + + F AT T
Sbjct: 402 QKFL----LMHEPV---DPVPYFMEDSVRFTHVAVDVVQ----GKDVLFHIIFLATDYGT 450
Query: 252 LRTVF 256
+R V
Sbjct: 451 IRKVL 455
>gi|417404511|gb|JAA49004.1| Putative semaphorin [Desmodus rotundus]
Length = 771
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 137/255 (53%), Gaps = 29/255 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G++ I + ++FFFRE A++ + GK+ +R++++CK D GG L W
Sbjct: 224 PKFIGAHLIPESDNPEDDKIYFFFRENAIDVEHTGKATHARISQICKNDFGGHRSLVNKW 283
Query: 89 ATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QDI+ + D K YG+FTTS+ GSA+C +
Sbjct: 284 TTFLKARLICSVPGPNGIDTHFDELQDIFLMNCKDPKNPIIYGIFTTSSNIFKGSAVCMY 343
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
S+ D+ R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 344 SMSDVRRVFLGPYAHREGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITF 402
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
RSHP M V +N+P+ + D+ FT +VVD V E +Y V F T T
Sbjct: 403 ARSHPTMYNPVLPINNRPIMIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTV 458
Query: 252 LRTVFVKVRLLQDVS 266
L+ V V D+
Sbjct: 459 LKVVSVPKETWHDLE 473
>gi|403301298|ref|XP_003941332.1| PREDICTED: semaphorin-4C [Saimiri boliviensis boliviensis]
Length = 820
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYIPESVGSFTGDDDKVYFFFRERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAP-DWQLYFNQLQAMHTLQDTSWHNTTFFGVFKAQWGDMYLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRHHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPL++E V R +P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLLEEQVRPRWRRPLLVKKGTNFTHLVADRV 428
>gi|301753184|ref|XP_002912440.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C-like [Ailuropoda
melanoleuca]
Length = 831
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNQLQALHTLRDASWHNTTFFGVFQARWGDVDLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWGRPLLVKKDTNFTHLVADRV 428
>gi|432866025|ref|XP_004070667.1| PREDICTED: semaphorin-3B-like [Oryzias latipes]
Length = 805
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 131/247 (53%), Gaps = 29/247 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGS+ + + VFFFFRETAVE GKS +SR+ ++C+ D GG+ L
Sbjct: 242 EPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQLCRNDLGGQRSLVNK 301
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTKF---YGVFTTSTTGLMGSAICS 142
W T+LK RL CS+PG YF+E++D++ + D K Y VF+TS++ GSA+C
Sbjct: 302 WTTFLKTRLICSVPGADGSDTYFDELRDVFLLQTRDRKHPLVYAVFSTSSSVFKGSAVCL 361
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI RAF+G F + W+P +VP PRPG C T+ PD V+
Sbjct: 362 YSMNDIRRAFLGPFAHKEGPNYQWVP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDDVIQ 420
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HPLM V +PVF R D FT + VD V +Y V F T T
Sbjct: 421 FARHHPLMYNPVYPMSRRPVFVRTNVDYSFTQIAVDRVN----AADGQYDVMFIGTDKGT 476
Query: 251 TLRTVFV 257
L+ + V
Sbjct: 477 VLKVINV 483
>gi|195128631|ref|XP_002008765.1| GI13674 [Drosophila mojavensis]
gi|193920374|gb|EDW19241.1| GI13674 [Drosophila mojavensis]
Length = 1081
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 126/212 (59%), Gaps = 9/212 (4%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+A E+++CGK ++SR+ARVCK D GG +L NW ++LKARLN
Sbjct: 229 FVGSFEAGNFVYFLLRESASEHMSCGKVIYSRIARVCKNDAGGDQVLRDNWTSFLKARLN 288
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PG++P+YF+EIQ + + Y F+T + GSA+C++++ I AF G FK
Sbjct: 289 CSLPGDYPYYFDEIQGMTYAESEQM-LYATFSTPGASIFGSAVCAYNLSSINAAFEGAFK 347
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q + + W V P+ QC + +L R + LMD+A+ +P+++
Sbjct: 348 HQEHADAPWKTV---NTPQRSQFQCASGATAF-GHLLESSR-YQLMDQAIQPIGAQPLYH 402
Query: 218 RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
R F H+ +D+VQ T +++Y +++
Sbjct: 403 SRLEHFKHIALDIVQTR---TEQLHVLYVSSS 431
>gi|195589712|ref|XP_002084593.1| GD12751 [Drosophila simulans]
gi|194196602|gb|EDX10178.1| GD12751 [Drosophila simulans]
Length = 1097
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 140/234 (59%), Gaps = 13/234 (5%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SR+ARVCK D GG +L NW ++LKARL
Sbjct: 235 FVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGGQLLRDNWTSFLKARL 294
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + + Y F TS + + GSA+C++++ I AF G F
Sbjct: 295 NCSLPGEYPYYFDEIQGMTYAESESV-LYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 353
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q + +AW V +++ + + G T ++ S+ +++ S + LMDEAV +P
Sbjct: 354 KQQEHADAAWKTVNTNQRSQFQCG-----TSSIGSSIGHWLESSRYQLMDEAVQPIGAEP 408
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNT 268
+++ + F L +D++ + T + V F A++ + V+ D + T
Sbjct: 409 LYHSKLEQFGRLALDIINTK----TEQVHVLFVASSENHIKKLSVKYGGDGAQT 458
>gi|393907308|gb|EJD74593.1| sema domain-containing protein [Loa loa]
Length = 632
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 117/187 (62%), Gaps = 6/187 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+F++RE A E + + +++RVARVCK D GG + W +Y+KAR
Sbjct: 141 PNFVASFVYGDHVYFWYREWAAETSDNDRQIYARVARVCKSDHGGARPAHERWTSYVKAR 200
Query: 96 LNCSIPGEFPFYFNEIQDIYK---VPGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIERA 151
LNCSIP PFYFNE+Q + + GD + + Y VF+T + + SAIC++ +E I+R
Sbjct: 201 LNCSIPANTPFYFNELQAVTEPISTTGDSSSYVYAVFSTPESNVQMSAICAYRMETIKRI 260
Query: 152 F-VGKFKEQATSTSAWLPVLSSR-VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G FK Q T+ S W P +P PRPG CV D+ L +++++FI +PLM EAV
Sbjct: 261 FDYGHFKIQKTAQSFWTPYRPHESMPIPRPGSCVTDSSKLSENIVSFIARNPLMHEAVPA 320
Query: 210 RDNKPVF 216
++P+
Sbjct: 321 IHSRPIL 327
>gi|395755010|ref|XP_002832676.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Pongo abelii]
Length = 772
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 128 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 187
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 188 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAVC 246
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 247 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 305
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 306 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 344
>gi|126303453|ref|XP_001379915.1| PREDICTED: semaphorin-4C [Monodelphis domestica]
Length = 832
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 122/220 (55%), Gaps = 24/220 (10%)
Query: 35 QPDFVGSYDIGKYV----------FFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V +FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSLTGDDDKIYFFFSERAVEYNCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL C+ P + YFN++Q ++ + D +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLVCAAP-DRQLYFNQLQALHTLQEDGWPNTTFFGVFRARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +EDI+R F G +KE W P + VP PRPG C+N+ + LPD+
Sbjct: 331 QYQLEDIQRVFEGPYKEYQQQAQKWGPY-TDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
LNF + HPLM+ V R +P+ ++D FTHLV D V+
Sbjct: 390 TLNFAKKHPLMEGQVGPRWGRPLLVKKDTNFTHLVADQVK 429
>gi|410206870|gb|JAA00654.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410254360|gb|JAA15147.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410288332|gb|JAA22766.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
gi|410336523|gb|JAA37208.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Pan
troglodytes]
Length = 833
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|410954644|ref|XP_003983973.1| PREDICTED: semaphorin-4C [Felis catus]
Length = 833
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNQLQALHTLQDASWHNTTFFGVFRARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWGRPLLVKKDTNFTHLVADRV 428
>gi|432904786|ref|XP_004077416.1| PREDICTED: semaphorin-4G-like [Oryzias latipes]
Length = 901
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 15/198 (7%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E +Y G+S +RVARVCK D GG L + W ++LKARL CS+P E+ F
Sbjct: 267 IYFFFTERNQDYSGTYGQSRVARVARVCKGDRGGHLTLQKRWTSFLKARLTCSLP-EYDF 325
Query: 107 YFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
+FN ++ ++ +P + + FYG+F + SA+C FS+ ++++AF G + E S
Sbjct: 326 HFNMLRSVFVMPDVEQQEPLFYGIFGLEWKNVKASAVCRFSLAEVQKAFQGPYMETQDSG 385
Query: 164 SAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
S W + ++PEPRPG C+ND + +LPD VL F+R HPLM V D +P
Sbjct: 386 SKWTE-YTGKIPEPRPGTCINDALRARGINISTSLPDDVLEFVRRHPLMSHQVQPLDKRP 444
Query: 215 VFYRRDLLFTHLVVDVVQ 232
V +RR +TH+ VVQ
Sbjct: 445 VLFRRTTDYTHMAAHVVQ 462
>gi|426336485|ref|XP_004031500.1| PREDICTED: semaphorin-4C [Gorilla gorilla gorilla]
Length = 833
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|395853678|ref|XP_003799331.1| PREDICTED: semaphorin-4C [Otolemur garnettii]
Length = 833
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 122/210 (58%), Gaps = 17/210 (8%)
Query: 36 PDFVGSYDIGK--YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ VGS+ IG ++FFF E AVEY + V +RVARVCK D GG L + W T+LK
Sbjct: 222 PESVGSF-IGDDDKIYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLK 280
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARL CS P ++ YFN++Q ++ + G +T F+GVF + SA+C + +E+I R
Sbjct: 281 ARLVCSAP-DWQLYFNQLQAMHTLQGTSWHNTTFFGVFRARWGDVDLSAVCEYQLEEIRR 339
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
F G +KE W + VP PRPG C+N+ + LPD+ LNFI+ HP
Sbjct: 340 VFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHP 398
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LM+E V R +P+ ++D FTHLV + V
Sbjct: 399 LMEEQVGPRWGRPLLVKKDTNFTHLVANRV 428
>gi|119591732|gb|EAW71326.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_b [Homo sapiens]
Length = 794
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 128/231 (55%), Gaps = 17/231 (7%)
Query: 15 DERIKQIALVMCAHRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVAR 72
D L++ H + P+ VGS+ D K V+FFFRE AVE + V +RVAR
Sbjct: 162 DPAKGHAGLLVEPHFVGSAYVPESVGSFTGDDDK-VYFFFRERAVESDCYAEQVVARVAR 220
Query: 73 VCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFT 129
VCK D GG L + W T+LKARL CS P + YFN++Q ++ + +T F+GVF
Sbjct: 221 VCKGDMGGARTLQRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQ 279
Query: 130 TSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---- 185
+ SAIC + +E+I+R F G +KE W + VP PRPG C+N+
Sbjct: 280 AQWGDMYLSAICEYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRR 338
Query: 186 -----TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+ LPD++LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 339 HGYTSSLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 389
>gi|195493718|ref|XP_002094536.1| GE20151 [Drosophila yakuba]
gi|194180637|gb|EDW94248.1| GE20151 [Drosophila yakuba]
Length = 1088
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 135/216 (62%), Gaps = 13/216 (6%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SR+ARVCK D GG +L NW ++LKARL
Sbjct: 226 FVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGGQLLRDNWTSFLKARL 285
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + ++ Y F TS + + GSA+C++++ I AF G F
Sbjct: 286 NCSLPGEYPYYFDEIQGMTYAE-SESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 344
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q + +AW V +++ + + G T ++ S+ +++ S + LMDEAV +P
Sbjct: 345 KQQEHADAAWKTVNTNQRSQFQCG-----TSSVGSSIGHWLESSRYQLMDEAVQPVGAEP 399
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D+V + T + V F A++
Sbjct: 400 LYHSKLEQFGRLALDIVSTK----TEQVHVLFVASS 431
>gi|37182802|gb|AAQ89201.1| SEMA4C [Homo sapiens]
Length = 833
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|157388902|ref|NP_060259.4| semaphorin-4C precursor [Homo sapiens]
gi|47606208|sp|Q9C0C4.2|SEM4C_HUMAN RecName: Full=Semaphorin-4C; Flags: Precursor
gi|80476638|gb|AAI09104.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Homo
sapiens]
gi|80478939|gb|AAI09105.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C [Homo
sapiens]
gi|119591733|gb|EAW71327.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_c [Homo sapiens]
gi|168275532|dbj|BAG10486.1| semaphorin-4C precursor [synthetic construct]
Length = 833
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|402891629|ref|XP_003909045.1| PREDICTED: semaphorin-4C [Papio anubis]
Length = 833
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAP-DWQLYFNQLQAVHTLQDTSWHNTTFFGVFQARWGDMYLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|332260450|ref|XP_003279302.1| PREDICTED: semaphorin-4C [Nomascus leucogenys]
Length = 833
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|119591731|gb|EAW71325.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C, isoform
CRA_a [Homo sapiens]
Length = 886
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 265 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 324
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 325 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 383
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 384 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 442
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 443 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 481
>gi|397468232|ref|XP_003805797.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Pan paniscus]
Length = 833
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESMGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|410035448|ref|XP_515634.4| PREDICTED: semaphorin-4C [Pan troglodytes]
Length = 858
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 237 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 296
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 297 QKKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 355
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 356 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 414
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 415 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 453
>gi|32425767|gb|AAH17476.2| SEMA4C protein [Homo sapiens]
Length = 645
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 24 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 83
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 84 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 142
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 143 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 201
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 202 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 240
>gi|363742877|ref|XP_003642725.1| PREDICTED: semaphorin-6C-like [Gallus gallus]
gi|363742925|ref|XP_003642743.1| PREDICTED: semaphorin-6C-like [Gallus gallus]
Length = 837
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 125/251 (49%), Gaps = 19/251 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + G +V+FFFRE A E GK SRV RVC+ D GG +L + W ++LK
Sbjct: 220 EPHFVHAMPHGAHVYFFFREMAAELGLPGKVPVSRVGRVCRNDAGGSPRVLERRWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
RL C++PG+ PF+F+ ++ + + + G VF T + GSA+C+F + D+ER
Sbjct: 280 KRLQCAVPGDVPFHFDVLEAVTAPHTLHGQPA-VLAVFGTQRNSIPGSAVCAFYLADVER 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVLNFIRSHPL 202
AF G F + + + W PV RVP PRPG C + +PD L+F + HPL
Sbjct: 339 AFEGPFADPRGAAAPWPPVPEERVPRPRPGCCAGMGSAAAIVTSGDIPDETLSFAKEHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT--VFVKVR 260
+ AVA +P+F + T L VDV G + V F + R V R
Sbjct: 399 LHGAVAPAGGRPLFTQTGTRLTQLAVDVGA----GPRGNHTVLFVGSEDGRVLKVLTAAR 454
Query: 261 LLQDVSNTSDS 271
D D+
Sbjct: 455 RPGDNGQRGDT 465
>gi|12698023|dbj|BAB21830.1| KIAA1739 protein [Homo sapiens]
Length = 963
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 342 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 401
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 402 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 460
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 461 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 519
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 520 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 558
>gi|410899178|ref|XP_003963074.1| PREDICTED: semaphorin-3B-like [Takifugu rubripes]
Length = 783
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 131/247 (53%), Gaps = 29/247 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGS+ + + VFFFFRETAVE GKS +SR+ ++C+ D GG+ L
Sbjct: 220 EPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQLCRNDMGGQRSLVNK 279
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LK RL CS+PG YF+E++D++ + D K Y VF+TS++ GSA+C
Sbjct: 280 WTTFLKTRLICSVPGADGSDTYFDELRDVFLLQTRDRKNPLVYTVFSTSSSVFKGSAVCL 339
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI RAF+G F + W+P +VP PRPG C T+ PD V+
Sbjct: 340 YSMNDIRRAFLGPFAHKEGPNYQWVP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDDVIQ 398
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HPLM V +P+F R D FT + VD V +Y V F T T
Sbjct: 399 FARHHPLMYNPVYPMTRRPIFVRTNVDYSFTQIAVD----RVGAADGQYDVMFIGTDKGT 454
Query: 251 TLRTVFV 257
L+ + V
Sbjct: 455 VLKVINV 461
>gi|348514724|ref|XP_003444890.1| PREDICTED: semaphorin-3B [Oreochromis niloticus]
Length = 806
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 132/247 (53%), Gaps = 29/247 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGS+ + + VFFFFRETAVE GKS +SR+ ++C+ D GG+ L
Sbjct: 250 EPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQLCRNDMGGQRSLVNK 309
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LK RL CS+PG YF+E++D++ + D K Y VF+TS++ GSA+C
Sbjct: 310 WTTFLKTRLICSVPGADGSDTYFDELRDVFLLQTRDRKNPLVYTVFSTSSSVFKGSAVCL 369
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+++ DI RAF+G F + W+P +VP PRPG C T+ PD V+
Sbjct: 370 YTMNDIRRAFLGPFAHKEGPNYQWVP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDDVIQ 428
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HPLM V + +P+F R D FT + VD V +Y V F T T
Sbjct: 429 FARHHPLMYNPVYPMNRRPIFIRTNVDYSFTQIAVDRVN----AADGQYDVMFIGTDKGT 484
Query: 251 TLRTVFV 257
L+ + V
Sbjct: 485 VLKVISV 491
>gi|194869616|ref|XP_001972486.1| GG13858 [Drosophila erecta]
gi|190654269|gb|EDV51512.1| GG13858 [Drosophila erecta]
Length = 1097
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 134/216 (62%), Gaps = 13/216 (6%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SR+ARVCK D GG +L NW ++LKARL
Sbjct: 235 FVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGGQLLRDNWTSFLKARL 294
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + ++ Y F TS + + GSA+C++++ I AF G F
Sbjct: 295 NCSLPGEYPYYFDEIQGMTYAE-SESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 353
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q + +AW V +++ + + G T ++ S+ +++ S + LMDEAV P
Sbjct: 354 KQQEHADAAWKTVNTNQRSQFQCG-----TSSIGSSIGHWLESSRYQLMDEAVQPIGAAP 408
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D+V + T + V F A++
Sbjct: 409 LYHSKLEQFGRLALDIVNTK----TEQVHVLFVASS 440
>gi|444517419|gb|ELV11542.1| Semaphorin-4C [Tupaia chinensis]
Length = 633
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 132/237 (55%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVAR+CK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEYDCYAEQVVARVARICKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + G +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNQLQAVHTLQGTSWHNTTFFGVFRARWGDVDLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I++ F G +KE W + +P PRPG C+N+ + LPD+
Sbjct: 331 EYHLEEIQQVFEGPYKEYHEQAQKW-GRYTDPIPTPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM+E V + +P+ ++D FTHLV D V+ + G T Y V F T
Sbjct: 390 TLNFIKKHPLMEEQVGPQWGRPLLVKKDTNFTHLVADRVR-GLDGAT--YTVLFIGT 443
>gi|327273401|ref|XP_003221469.1| PREDICTED: semaphorin-3A-like [Anolis carolinensis]
Length = 776
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 247 IYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLMCSVPGPNGID 306
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSAIC +++ D+ R F+G + +
Sbjct: 307 THFDELQDVFLMNSKDPKNPIIYGVFTTSSNIFKGSAICMYTMTDVRRVFLGPYAHRDGP 366
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 367 NYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPI 425
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ DL FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 426 MVKTDLDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSIPKETWHDLE 477
>gi|311252168|ref|XP_003124961.1| PREDICTED: semaphorin-4C [Sus scrofa]
Length = 833
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 129/237 (54%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNQLQALHTLLDASWHNTTFFGVFRARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM+E V R +P+ ++D FTHLV D V V + Y V F T
Sbjct: 390 TLNFIKKHPLMEEQVDPRWGRPLLVKKDTNFTHLVADRV---VGLDGATYTVLFIGT 443
>gi|355718462|gb|AES06276.1| sema domain, immunoglobulin domain , transmembrane domain and short
cytoplasmic domain, 4C [Mustela putorius furo]
Length = 842
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 222 EPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 281
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 282 QRKWTTFLKARLVCSAP-DWQLYFNQLQALHTLRDASWHNTTFFGVFRARWGDVDLSAVC 340
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + +P PRPG C+N+ + LPD+
Sbjct: 341 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPIPSPRPGSCINNWHRRHGYTSSLELPDN 399
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 400 TLNFIKKHPLMEEQVRPRWGRPLLVKKDTNFTHLVADRV 438
>gi|301611557|ref|XP_002935293.1| PREDICTED: semaphorin-3D-like [Xenopus (Silurana) tropicalis]
Length = 776
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F G+Y I ++FFFRE++ E KSVFSRV RVCK D GG+ L W T
Sbjct: 242 FFGAYAIPDTYNPDDDKIYFFFRESSPEGSFSEKSVFSRVGRVCKNDIGGQRSLINKWTT 301
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIP + YF+E+QDI+ +P D + YG+FTT+++ SA+C +S+
Sbjct: 302 FLKARLVCSIPAQDGGDTYFDELQDIFLLPTKDDRNPVVYGIFTTTSSIFKASAVCVYSM 361
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + + W+ R+P PRPG C + T+ PD V+NF+
Sbjct: 362 ADIRAVFNGPYAHKESPDHRWVQY-DGRIPYPRPGTCPSKTYDPTIRSTKDFPDDVINFV 420
Query: 198 RSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
++HPLM +AV KPVF R D T + VD V +Y V F T + TV
Sbjct: 421 KNHPLMYKAVYPLHGKPVFTRLNVDYKLTQIAVD----HVVAEDGQYDVMFLG-TDIGTV 475
Query: 256 FVKVRLLQDVSNTSDSICES 275
+ + +D+ N + + E
Sbjct: 476 LKVITVTKDIWNMEEVLLEE 495
>gi|348571927|ref|XP_003471746.1| PREDICTED: semaphorin-4C-like [Cavia porcellus]
Length = 831
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 130/237 (54%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKIYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-NWQLYFNQLRAVHTLRGASWHNTTFFGVFRARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKWA-RYTDPVPTPRPGSCINNWHRRHGYSSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM+E VA R +P+ ++ FTHLV D + + G T Y V F T
Sbjct: 390 TLNFIKKHPLMEEQVAPRWGRPLLVKKAANFTHLVADRIM-GLDGAT--YTVLFIGT 443
>gi|195327031|ref|XP_002030225.1| GM24682 [Drosophila sechellia]
gi|194119168|gb|EDW41211.1| GM24682 [Drosophila sechellia]
Length = 1378
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 133/216 (61%), Gaps = 13/216 (6%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SR+ARVCK D GG +L NW ++LKARL
Sbjct: 516 FVGSFEAGNFVYFLLRESAAEHMSCGKVIYSRIARVCKNDVGGGGQLLRDNWTSFLKARL 575
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + + Y F TS + + GSA+C++ + I AF G F
Sbjct: 576 NCSLPGEYPYYFDEIQGMTYAESESV-LYATFRTSGSSIFGSAVCAYKLSSINAAFDGPF 634
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q + +AW V +++ + + G T ++ S+ +++ S + LMDEAV +P
Sbjct: 635 KQQEHADAAWKTVNTNQRSQFQCG-----TSSIGSSIGHWLESSRYQLMDEAVQPIGAEP 689
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D++ + T + V F A++
Sbjct: 690 LYHSKLEQFGRLALDIINTK----TEQVHVLFVASS 721
>gi|388454697|ref|NP_001253387.1| semaphorin-4C precursor [Macaca mulatta]
gi|355565914|gb|EHH22343.1| hypothetical protein EGK_05585 [Macaca mulatta]
gi|380789533|gb|AFE66642.1| semaphorin-4C precursor [Macaca mulatta]
Length = 833
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSYDIGK----------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSLTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAP-DWQLYFNQLQAVHTLQDTSWHNTTFFGVFQARWGDMYLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|194220400|ref|XP_001916376.1| PREDICTED: semaphorin-4C [Equus caballus]
Length = 647
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 122/219 (55%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYIPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DRQLYFNQLQALHTLQDTSWHNTTFFGVFQARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEQVGPRWGRPLLVKKDTNFTHLVADRV 428
>gi|354485785|ref|XP_003505062.1| PREDICTED: semaphorin-3A-like [Cricetulus griseus]
Length = 772
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>gi|431919738|gb|ELK18095.1| Semaphorin-5B [Pteropus alecto]
Length = 915
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 2/135 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPV 169
F+ Q +AWLP+
Sbjct: 344 PFRYQENPRAAWLPI 358
>gi|195427577|ref|XP_002061853.1| GK17220 [Drosophila willistoni]
gi|194157938|gb|EDW72839.1| GK17220 [Drosophila willistoni]
Length = 1098
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 131/213 (61%), Gaps = 10/213 (4%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDT-GGKNILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E++ CGK ++SR+ARVCK D GG +L NW ++LKARL
Sbjct: 223 FVGSFEAGNFVYFLLRESAAEHMTCGKVIYSRIARVCKNDVGGGGQLLRDNWTSFLKARL 282
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PG++P+YF+EIQ + + Y F TS + + GSA+C++++ I AF G F
Sbjct: 283 NCSLPGDYPYYFDEIQGMTYAESEHL-LYATFRTSGSSIFGSAVCAYNLTAINDAFEGAF 341
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVF 216
+ Q + AW V + + + QC + + D L R + LMD+AV ++P++
Sbjct: 342 RHQEHADEAWQTVNTRQRSQ---FQCASGAQGF-DHWLESSR-YQLMDQAVQPIGSQPLY 396
Query: 217 YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ + F+H+ +DVVQ + T +++Y A++
Sbjct: 397 HSKLEQFSHIAMDVVQTK---TEQIHMIYVASS 426
>gi|8394255|ref|NP_059006.1| semaphorin-3A precursor [Rattus norvegicus]
gi|8134665|sp|Q63548.1|SEM3A_RAT RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; Flags: Precursor
gi|1171619|emb|CAA64607.1| semaphorin III/collapsin-1 [Rattus norvegicus]
gi|149029001|gb|EDL84295.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Rattus norvegicus]
Length = 772
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>gi|341942015|sp|O08665.2|SEM3A_MOUSE RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; AltName: Full=Semaphorin-D; Short=Sema
D; Flags: Precursor
Length = 772
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>gi|31543681|ref|NP_033178.2| semaphorin-3A precursor [Mus musculus]
gi|340523100|ref|NP_001230001.1| semaphorin-3A precursor [Mus musculus]
gi|340523102|ref|NP_001230002.1| semaphorin-3A precursor [Mus musculus]
gi|18654370|gb|AAL77611.1|L41541_1 collapsin/semaphorin III [Mus musculus]
gi|2055316|dbj|BAA19773.1| semaphorin 3A [Mus musculus]
gi|34785839|gb|AAH57588.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Mus musculus]
gi|60552594|gb|AAH90844.1| Sema3a protein [Mus musculus]
gi|148706754|gb|EDL38701.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Mus musculus]
Length = 772
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>gi|301611559|ref|XP_002935301.1| PREDICTED: semaphorin-3A-like [Xenopus (Silurana) tropicalis]
Length = 766
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 135/255 (52%), Gaps = 29/255 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G+Y + + V+FFFRE A++ + GK+ +R+ ++CK D GG L W
Sbjct: 225 PRFIGAYLVPESDNPEDDKVYFFFRENAIDGEHTGKATHARIGQLCKNDFGGHRSLVNKW 284
Query: 89 ATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD++ + D K Y VFTTS+ GSA+C +
Sbjct: 285 TTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPVVYAVFTTSSNIFKGSAVCMY 344
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 345 SLADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVIMF 403
Query: 197 IRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
RSHP M V +N+P+ + D FT +VVD V+ E +Y V F T T
Sbjct: 404 ARSHPAMYNPVFPINNRPIIIKTEVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTV 459
Query: 252 LRTVFVKVRLLQDVS 266
L+ V V D+
Sbjct: 460 LKVVSVPKETWHDLE 474
>gi|348568159|ref|XP_003469866.1| PREDICTED: semaphorin-3A-like [Cavia porcellus]
Length = 772
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 129/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLVCSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNPKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP+M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPVMYNPVFPVNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDAGTVLKVVSIPKETWHDL 472
>gi|344244054|gb|EGW00158.1| Semaphorin-3A [Cricetulus griseus]
Length = 758
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDLE 473
>gi|395818533|ref|XP_003782679.1| PREDICTED: semaphorin-3A [Otolemur garnettii]
Length = 772
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLLCSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|74183783|dbj|BAE24487.1| unnamed protein product [Mus musculus]
Length = 688
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDLE 473
>gi|347967840|ref|XP_312521.5| AGAP002424-PA [Anopheles gambiae str. PEST]
gi|333468279|gb|EAA07529.5| AGAP002424-PA [Anopheles gambiae str. PEST]
Length = 1100
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 131/228 (57%), Gaps = 8/228 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F GS++ G +++F RE AVEY+NCGK ++SR+ARVCK D GG IL NW +++K
Sbjct: 182 EPQFAGSFEHGGFIYFVLREAAVEYMNCGKIIYSRIARVCKNDAGGTPGILKDNWTSFVK 241
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV 153
ARLNCS+PG++PFY+NE+Q + D+ Y FTT + GSAIC++++ I+ AF
Sbjct: 242 ARLNCSLPGDYPFYYNEVQGMV-YSQDEGVLYATFTTPENSIHGSAICAYNMSAIQAAFD 300
Query: 154 GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
G FK Q + +AW + V +C N + + L + LMD+A+ +
Sbjct: 301 GAFKHQESKGAAW---RAQDVSNRDHYECRNGSPSGRHMSLIESSKYQLMDQAIQPITGR 357
Query: 214 PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAA-TTTLRTVFVKVR 260
P+ + +H+ +D++ ++ +I+Y A T++ + V R
Sbjct: 358 PLHHTALERLSHIAIDIIPTKLHERV--HIIYVATDGGTIKKISVLPR 403
>gi|324505777|gb|ADY42477.1| Semaphorin-1A [Ascaris suum]
Length = 754
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 119/206 (57%), Gaps = 10/206 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F GS+ KYV+ +FRE A E +C ++++SRVAR+C+ D GG S W +++KA
Sbjct: 220 EPQFAGSFKDEKYVYLWFREQAAELESCSRAIYSRVARLCRSDMGGPRPYSNEWTSFVKA 279
Query: 95 RLNCSIPGEFPFYFNEIQDI-------YKVPGDDTKF-YGVFTTSTTGLMGSAICSFSIE 146
RLNCS+PG++PFYF++I+ I Y ++ + Y VF + G+ SAIC+F +
Sbjct: 280 RLNCSVPGDYPFYFDQIEAIAPPVSGRYSAKDENARLVYAVFRSPLAGVSASAICAFDLT 339
Query: 147 DIERAFV-GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDE 205
I + F ++ QA S S W P + + RPG CV D+ +L + + F+RS PL D+
Sbjct: 340 QITKVFSKSSYRSQANSRSPWTPSHDDILSKHRPGTCVKDSRSLSEEAVAFVRSSPLADD 399
Query: 206 AVAHRDNKPV-FYRRDLLFTHLVVDV 230
AV + P+ + FT + VD
Sbjct: 400 AVHNYFGAPLSIHSGSDHFTQIAVDA 425
>gi|344270784|ref|XP_003407222.1| PREDICTED: semaphorin-3A-like [Loxodonta africana]
Length = 772
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MVKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|409107366|pdb|4GZ8|A Chain A, Mouse Semaphorin 3a, Domains Sema-Psi-Ig
gi|409107367|pdb|4GZ8|B Chain B, Mouse Semaphorin 3a, Domains Sema-Psi-Ig
Length = 667
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 226 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 285
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 286 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 345
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 346 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 404
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 405 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 455
>gi|51247254|pdb|1Q47|A Chain A, Structure Of The Semaphorin 3a Receptor-Binding Module
gi|51247255|pdb|1Q47|B Chain B, Structure Of The Semaphorin 3a Receptor-Binding Module
Length = 495
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 218 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 277
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 278 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 337
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 338 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 396
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 397 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 447
>gi|410952174|ref|XP_003982758.1| PREDICTED: semaphorin-3A [Felis catus]
Length = 772
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|334348349|ref|XP_001369710.2| PREDICTED: semaphorin-3A-like [Monodelphis domestica]
Length = 772
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 136/255 (53%), Gaps = 24/255 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVSNTSD 270
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVKYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLEEV-- 475
Query: 271 SICESSVGRLKQTVT 285
+ E +V R T+T
Sbjct: 476 LLEEMTVFREPTTIT 490
>gi|73981844|ref|XP_849675.1| PREDICTED: semaphorin-3A isoform 2 [Canis lupus familiaris]
Length = 772
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|409107375|pdb|4GZA|G Chain G, Complex Of Mouse Plexin A2 - Semaphorin 3a - Neuropilin-1
Length = 538
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 226 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 285
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 286 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 345
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 346 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 404
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 405 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 455
>gi|268563705|ref|XP_002638911.1| C. briggsae CBR-MAB-20 protein [Caenorhabditis briggsae]
gi|74783346|sp|Q60PR7.1|SEM2A_CAEBR RecName: Full=Semaphorin-2A; Short=Sema-2a; AltName: Full=Male
abnormal protein 20; Flags: Precursor
Length = 656
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 6/197 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++V FFFRE A + + + SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 209 EPQFVGSFDVGQHVLFFFREIAHDNSFGERIIHSRVARVCKKDIGGRNVLRQVWTSFVKA 268
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 269 RLNCSVSANFPFYFDHIQSVKRVDKHGETFFYATFSTSETAFTSSAICMFQLSSINHLLD 328
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C +++ ++ D+ L+F ++H L+ ++++
Sbjct: 329 TGLLMEE--TANGQFAVTADEIPAHRPGTCSSNSHSISDTDLHFAKTHLLVSDSIS--GG 384
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD ++T ++VD
Sbjct: 385 TPILPLRDHVYTQILVD 401
>gi|358411781|ref|XP_617961.6| PREDICTED: semaphorin-3A [Bos taurus]
Length = 737
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 208 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 267
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 268 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 327
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 328 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 386
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 387 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 438
>gi|301756312|ref|XP_002914005.1| PREDICTED: semaphorin-3A-like [Ailuropoda melanoleuca]
gi|281347084|gb|EFB22668.1| hypothetical protein PANDA_001840 [Ailuropoda melanoleuca]
Length = 772
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|395539084|ref|XP_003771503.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3A-like [Sarcophilus
harrisii]
Length = 750
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVKYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|452085175|ref|NP_001263630.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A precursor [Bos taurus]
gi|296488589|tpg|DAA30702.1| TPA: semaphorin-3A-like [Bos taurus]
gi|440902881|gb|ELR53615.1| Semaphorin-3A [Bos grunniens mutus]
Length = 772
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|426227495|ref|XP_004007853.1| PREDICTED: semaphorin-3A [Ovis aries]
Length = 772
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|291394889|ref|XP_002713889.1| PREDICTED: semaphorin-3A-like [Oryctolagus cuniculus]
Length = 770
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFRGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-FQGRVPYPRPGTCPSKTFGGFESTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MVKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|300797834|ref|NP_001179552.1| semaphorin-4C precursor [Bos taurus]
gi|296482831|tpg|DAA24946.1| TPA: sema domain, immunoglobulin domain (Ig), transmembrane domain
(TM) and short cytoplasmic domain, (semaphorin) 4C [Bos
taurus]
Length = 833
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G Y V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN +Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNRLQALHTLQDASWHNTTFFGVFRARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I++ F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQKVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNFI+ HPLM+E V R +P+ +++ THLV D V
Sbjct: 390 ILNFIKKHPLMEEQVRPRWGRPLLVKKNANLTHLVADRV 428
>gi|45550455|ref|NP_611293.3| Semaphorin-5c, isoform A [Drosophila melanogaster]
gi|45445917|gb|AAF49966.3| Semaphorin-5c, isoform A [Drosophila melanogaster]
Length = 1093
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 132/216 (61%), Gaps = 17/216 (7%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SRVARVCK D GG +L NW ++LKARL
Sbjct: 235 FVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARL 294
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + ++ Y F TS + + GSA+C++++ I AF G F
Sbjct: 295 NCSLPGEYPYYFDEIQGMTYAE-SESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 353
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q S +AW V +++ + + G S+ +++ S + LMDEAV +P
Sbjct: 354 KQQEHSDAAWKTVNTNQRSQFQCGT---------SSIGHWLESSRYQLMDEAVQPIGAEP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D++ + T + V F A++
Sbjct: 405 LYHSKLEQFGRLALDIINTK----TEQVHVLFVASS 436
>gi|18859349|ref|NP_571123.1| semaphorin-3D precursor [Danio rerio]
gi|8134720|sp|Q9W6G6.1|SEM3D_DANRE RecName: Full=Semaphorin-3D; AltName: Full=Semaphorin-2; AltName:
Full=Semaphorin-Z2; Short=Sema Z2; Flags: Precursor
gi|4469556|gb|AAD21310.1| secreted class III semaphorin [Danio rerio]
Length = 764
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 134/242 (55%), Gaps = 21/242 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + KSV SRVAR+C+ D GG L+ W T+LKARL CSIPG
Sbjct: 264 IYFFFREASRDGSTTDKSVLSRVARICRNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 323
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ +P D K YGVFTT+++ GSA+C +++EDI AF G + +
Sbjct: 324 THFDELQDIFLLPSRDEKNPMVYGVFTTTSSIFKGSAVCVYTMEDIRAAFNGPYAHKEGP 383
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD V++FIR HPLM ++V +P
Sbjct: 384 DHRWVE-YEGRIPYPRPGTCPSRTYDPHIKTTKDFPDEVISFIRLHPLMYQSVHPMTGRP 442
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+F R + T ++VD V E +Y V F T + +V V + Q+ ++ + I
Sbjct: 443 IFTRINTEYRLTQIIVDRVAAE----DGQYAVMFLG-TDMGSVLKVVSITQENWSSEEII 497
Query: 273 CE 274
E
Sbjct: 498 LE 499
>gi|440909442|gb|ELR59352.1| Semaphorin-4C [Bos grunniens mutus]
Length = 831
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G Y V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN +Q ++ + +T F+GVF + SA+C
Sbjct: 272 QRKWTTFLKARLVCSAP-DWQLYFNRLQALHTLQDASWHNTTFFGVFRARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I++ F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQKVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNFI+ HPLM+E V R +P+ +++ THLV D V
Sbjct: 390 ILNFIKKHPLMEEQVRPRWGRPLLVKKNANLTHLVADRV 428
>gi|431839065|gb|ELK00993.1| Semaphorin-3A [Pteropus alecto]
Length = 734
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 205 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 264
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 265 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 324
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 325 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIMFARSHPAMYNPVFPINNRPI 383
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 384 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 435
>gi|190336686|gb|AAI62510.1| Semaphorin 3d [Danio rerio]
Length = 764
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 134/242 (55%), Gaps = 21/242 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + KSV SRVAR+C+ D GG L+ W T+LKARL CSIPG
Sbjct: 264 IYFFFREASRDGSTTDKSVLSRVARICRNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 323
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ +P D K YGVFTT+++ GSA+C +++EDI AF G + +
Sbjct: 324 THFDELQDIFLLPSRDEKNPTVYGVFTTTSSIFKGSAVCVYTMEDIRAAFNGPYAHKEGP 383
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD V++FIR HPLM ++V +P
Sbjct: 384 DHRWVE-YEGRIPYPRPGTCPSRTYDPHIKTTKDFPDEVISFIRLHPLMYQSVHPMTGRP 442
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+F R + T ++VD V E +Y V F T + +V V + Q+ ++ + I
Sbjct: 443 IFTRINTEYRLTQIIVDRVAAE----DGQYAVMFLG-TDMGSVLKVVSITQENWSSEEII 497
Query: 273 CE 274
E
Sbjct: 498 LE 499
>gi|350596979|ref|XP_003361861.2| PREDICTED: semaphorin-3A-like, partial [Sus scrofa]
Length = 558
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 277 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 336
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 337 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 396
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 397 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 455
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 456 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDL 506
>gi|348568161|ref|XP_003469867.1| PREDICTED: semaphorin-3D-like [Cavia porcellus]
Length = 777
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 129/245 (52%), Gaps = 30/245 (12%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDGGGQRSLISKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTTS++ GSA+C +S+
Sbjct: 303 FLKARLTCSIPGNDGADTHFDELQDIYLLPTRDERNPVVYGVFTTSSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWV-QYDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTL 252
R HPLM +AV P F R D T +VVD V +Y V F T T L
Sbjct: 422 RRHPLMYKAVYPASGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLGTDVGTVL 477
Query: 253 RTVFV 257
+ V +
Sbjct: 478 KVVSI 482
>gi|281366124|ref|NP_001163430.1| Semaphorin-5c, isoform B [Drosophila melanogaster]
gi|33589336|gb|AAQ22435.1| RE68041p [Drosophila melanogaster]
gi|272455171|gb|ACZ94701.1| Semaphorin-5c, isoform B [Drosophila melanogaster]
Length = 1091
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 132/216 (61%), Gaps = 17/216 (7%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SRVARVCK D GG +L NW ++LKARL
Sbjct: 233 FVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARL 292
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + ++ Y F TS + + GSA+C++++ I AF G F
Sbjct: 293 NCSLPGEYPYYFDEIQGMTYAE-SESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 351
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q S +AW V +++ + + G S+ +++ S + LMDEAV +P
Sbjct: 352 KQQEHSDAAWKTVNTNQRSQFQCGT---------SSIGHWLESSRYQLMDEAVQPIGAEP 402
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D++ + T + V F A++
Sbjct: 403 LYHSKLEQFGRLALDIINTK----TEQVHVLFVASS 434
>gi|345327791|ref|XP_001506000.2| PREDICTED: semaphorin-3A-like [Ornithorhynchus anatinus]
Length = 773
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++C+ D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICRNDFGGHRSLVNKWTTFLKARLICSVPGSNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVKYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|449273917|gb|EMC83260.1| Semaphorin-3A [Columba livia]
Length = 772
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDIFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 464
>gi|332206559|ref|XP_003252360.1| PREDICTED: semaphorin-3A [Nomascus leucogenys]
Length = 771
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|402864351|ref|XP_003896434.1| PREDICTED: semaphorin-3A, partial [Papio anubis]
Length = 762
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|703190|gb|AAA73934.1| semaphorin III, partial [Mus musculus]
Length = 666
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 137 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 196
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R +G + +
Sbjct: 197 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVLLGPYAHRDGP 256
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 257 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 315
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 316 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDLE 367
>gi|149705894|ref|XP_001491284.1| PREDICTED: semaphorin-3A-like [Equus caballus]
Length = 772
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LK+RL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKSRLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|109067651|ref|XP_001096722.1| PREDICTED: semaphorin-3A-like [Macaca mulatta]
Length = 734
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 205 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 264
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 265 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 324
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 325 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 383
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 384 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 435
>gi|307212164|gb|EFN88018.1| Semaphorin-5A [Harpegnathos saltator]
Length = 1025
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 126/218 (57%), Gaps = 10/218 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FVGS++ YV+F FRE AVE++NCGK ++SR+ARVCK D G K I+ + W T+ KAR
Sbjct: 147 PQFVGSFEAEDYVYFLFREIAVEHMNCGKIIYSRIARVCKYDPGYK-IVEREWTTFRKAR 205
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PGEFPFY++EIQ P ++ Y FTTST + GSAIC+F++ + +F G
Sbjct: 206 LNCSLPGEFPFYYDEIQGATYHP-EEGVIYATFTTSTNSIAGSAICAFNMSAVIASFDGP 264
Query: 156 FKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
+K Q S SAW V +P +C V + + LMD AV +P+
Sbjct: 265 YKYQQKSNSAWERV-HDVAHDPNRQRCGPSFNITSPEVSKWYQ---LMDNAVQSTMLEPL 320
Query: 216 FYRRDLLFTHLVVDVVQYEVF-GTTSEYIVYFAATTTL 252
FTH+ VD+ +V G T ++Y A TT L
Sbjct: 321 HTAILERFTHIAVDITPTKVHRGVT---VLYVATTTGL 355
>gi|854330|emb|CAA59985.1| semaphorin D [Mus musculus]
Length = 772
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 127/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A+ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIGGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFGRSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>gi|326912514|ref|XP_003202594.1| PREDICTED: semaphorin-3A-like [Meleagris gallopavo]
Length = 438
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 80 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 139
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 140 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 199
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 200 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPI 258
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 259 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 301
>gi|224092966|ref|XP_002186657.1| PREDICTED: semaphorin-3A isoform 1 [Taeniopygia guttata]
Length = 808
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 279 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 338
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 339 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 398
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 399 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPI 457
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 458 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 500
>gi|92058719|gb|AAI14624.1| SEMA6C protein [Homo sapiens]
Length = 537
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 215 KYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 274
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSF 143
++W ++LK RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F
Sbjct: 275 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAF 334
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETL 189
+++IER F GKFKEQ + AW PV RVP PRPG C + L
Sbjct: 335 YLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCPAHSSPL 380
>gi|321466135|gb|EFX77132.1| hypothetical protein DAPPUDRAFT_54505 [Daphnia pulex]
Length = 945
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 130/225 (57%), Gaps = 14/225 (6%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNI-LSQNWATYLKA 94
PDFVGS + +V+FFFRE AVE+ NCGK+V+SRVARVCK D GG + L W T+LKA
Sbjct: 196 PDFVGSVEADNFVYFFFREAAVEFSNCGKAVYSRVARVCKNDLGGGQLMLKDTWTTFLKA 255
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS+P E+PFY++ IQ + + ++ FY FTTS + GSA+CSF+++ ++ F G
Sbjct: 256 RLNCSLPAEYPFYYDHIQSVTFLE-EERLFYATFTTSENSIAGSAVCSFTLDSMQETFAG 314
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV------A 208
F+ Q++ TS W V S+ + + S L + LMD AV
Sbjct: 315 PFRSQSSPTSTWESVHSTHAHSHC--SSHHPAHSSSSSSLLEAEKYQLMDRAVQPIFRPG 372
Query: 209 HRDNKPVFYRRDL-LFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
N P+ R DL F+H+ VDVV ++ +++Y A+ L
Sbjct: 373 KSGNGPLI-RLDLERFSHIAVDVVATKIHSFV--HVLYVASRDGL 414
>gi|296209815|ref|XP_002807088.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3A-like [Callithrix
jacchus]
Length = 772
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ PD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFDGFDSTKDFPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|186659517|ref|NP_001119519.1| semaphorin-4C precursor [Mus musculus]
gi|8134699|sp|Q64151.1|SEM4C_MOUSE RecName: Full=Semaphorin-4C; AltName: Full=M-Sema F; AltName:
Full=Semaphorin-C-like 1; Short=Sema I; Short=Semaphorin
I; Flags: Precursor
gi|1110599|gb|AAB35184.1| semaphorin homolog [Mus sp.]
gi|148682547|gb|EDL14494.1| mCG17761, isoform CRA_a [Mus musculus]
Length = 834
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLVCSAP-DWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEQIQQVFEGPYKEYSEQAQKWA-RYTDPVPSPRPGSCINNWHRDNGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM++ V R +P+ +++ FTH+V D V
Sbjct: 390 TLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRV 428
>gi|397504405|ref|XP_003822787.1| PREDICTED: semaphorin-3A [Pan paniscus]
Length = 771
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>gi|402585229|gb|EJW79169.1| sema domain-containing protein, partial [Wuchereria bancrofti]
Length = 350
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 5/186 (2%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+F++RE A E + + +++RVARVC+ D GG + W +Y+KAR
Sbjct: 1 PNFVASFVYGDHVYFWYREWAAEVGDGDRQIYARVARVCRGDRGGARPAHERWTSYVKAR 60
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPG--DDTKF-YGVFTTSTTGLMGSAICSFSIEDIERAF 152
LNCS+P PFYFNE+Q + + D + + Y VF+T + + SA+C++ +E I+R F
Sbjct: 61 LNCSVPANTPFYFNELQAVTEPVATVDGSSYVYAVFSTPESNVRMSAVCAYRMETIKRIF 120
Query: 153 -VGKFKEQATSTSAWLPVLSSR-VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
G FK Q T+ S W+P +P PRPG CV D+ L +++++FI +PLM EAV
Sbjct: 121 DYGHFKIQKTAQSFWVPYRPHESMPVPRPGSCVTDSSKLSENIVSFIARNPLMHEAVPAV 180
Query: 211 DNKPVF 216
+KP+
Sbjct: 181 RSKPIL 186
>gi|5174673|ref|NP_006071.1| semaphorin-3A precursor [Homo sapiens]
gi|114614258|ref|XP_001160854.1| PREDICTED: semaphorin-3A isoform 3 [Pan troglodytes]
gi|8134674|sp|Q14563.1|SEM3A_HUMAN RecName: Full=Semaphorin-3A; AltName: Full=Semaphorin III;
Short=Sema III; Flags: Precursor
gi|436560|gb|AAA65938.1| semaphorin-III [Homo sapiens]
gi|51094940|gb|EAL24185.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|111494030|gb|AAI11417.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|119597388|gb|EAW76982.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Homo sapiens]
gi|410263800|gb|JAA19866.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
gi|410301288|gb|JAA29244.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
Length = 771
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>gi|297681168|ref|XP_002818337.1| PREDICTED: semaphorin-3A [Pongo abelii]
Length = 771
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>gi|158260931|dbj|BAF82643.1| unnamed protein product [Homo sapiens]
Length = 771
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVSKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>gi|239985641|ref|NP_001121818.1| semaphorin-3B precursor [Danio rerio]
Length = 775
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 125/236 (52%), Gaps = 26/236 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+ ++ + + VFFFFRETAVE GK +SR+ ++C+ D GG+ L
Sbjct: 222 EPKFIAAFGVPESDNPDDDKVFFFFRETAVEAQGFGKVTYSRIGQLCRNDMGGQRSLVNK 281
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKARL CS+PG +F+E++D++ + D K Y VFTTS++ GSA+C
Sbjct: 282 WTTFLKARLVCSVPGNDGTETHFDELRDVFLLQTRDKKNPLIYTVFTTSSSVFQGSAVCL 341
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+++ DI RAF+G F + W+P +VP PRPG C T+ PD+V+
Sbjct: 342 YTMNDIRRAFLGPFAHKEGPNYQWIP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDNVIQ 400
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
F R HPLM V +P+F R + FT + VD V Y V F T
Sbjct: 401 FARHHPLMFNPVTPLGGRPLFLRTGIPYTFTQITVDRVN----AADGHYDVMFIGT 452
>gi|426230700|ref|XP_004023732.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-6B [Ovis aries]
Length = 770
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 121/219 (55%), Gaps = 23/219 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSA------------WLPVLSSRVPEPRPGQCV------NDTETLPDSV 193
F G+F+EQ + S WL L++ P PRPG C N + PD +
Sbjct: 348 FEGRFREQKSPGSXPXTEGWDSQAVVWLSALTTPSPPPRPGCCAAPGMQYNASSAFPDEI 407
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDV 230
LNF+++H LMDEAV + P R + T + VDV
Sbjct: 408 LNFVKTHSLMDEAVPSLGHAPWIVRTLMRHQLTRVAVDV 446
>gi|147902059|ref|NP_001079324.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A precursor [Xenopus laevis]
gi|20384677|gb|AAK38166.1| semaphorin 3A [Xenopus laevis]
Length = 774
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 134/255 (52%), Gaps = 29/255 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G+Y + + V+FFFRE A++ + GK+ +R+ ++CK D GG L W
Sbjct: 225 PRFIGAYLVPESDNPEDDKVYFFFRENAIDGEHTGKATHARIGQLCKNDFGGHRSLVNKW 284
Query: 89 ATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD+ + D K Y VFTTS+ GSA+C +
Sbjct: 285 TTFLKARLICSVPGPNGIDTHFDELQDVVLMNSKDPKNPVVYAVFTTSSNIFKGSAVCMY 344
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 345 SLTDIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPRQTFGGFDSTKDLPDEVIMF 403
Query: 197 IRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
RSHP M V +N+P+ + D FT +VVD V+ E +Y V F T T
Sbjct: 404 ARSHPAMYNPVFPINNRPIIIKTEVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTI 459
Query: 252 LRTVFVKVRLLQDVS 266
L+ V V D+
Sbjct: 460 LKVVSVPKETWTDLE 474
>gi|431913044|gb|ELK14794.1| Semaphorin-4C [Pteropus alecto]
Length = 867
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 225 EPHFVGSAYIPESMGSFTGDDDKVYFFFSERAVEYDCYTEQVVARVARVCKGDLGGARTL 284
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + +T F+ VF + SA+C
Sbjct: 285 QKKWTTFLKARLVCSAP-DWQLYFNQLRALHTLQDASWHNTTFFAVFRARWGDVDLSAVC 343
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE + W + + VP PRPG C+N+ + LPD+
Sbjct: 344 EYQLEEIQRVFEGPYKEYREQSQKW-GLYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 402
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 403 TLNFIKKHPLMEEQVRPRWGRPLLVKKDTNFTHLVADRV 441
>gi|403257161|ref|XP_003921200.1| PREDICTED: semaphorin-3A [Saimiri boliviensis boliviensis]
Length = 772
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 126/236 (53%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C T+ PD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFDGFESTKDFPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|148682548|gb|EDL14495.1| mCG17761, isoform CRA_b [Mus musculus]
Length = 914
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 292 EPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTL 351
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 352 QKKWTTFLKARLVCSAP-DWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAVC 410
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 411 EYQLEQIQQVFEGPYKEYSEQAQKWA-RYTDPVPSPRPGSCINNWHRDNGYTSSLELPDN 469
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM++ V R +P+ +++ FTH+V D V + G T Y V F T
Sbjct: 470 TLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRVP-GLDGAT--YTVLFIGT 523
>gi|50511079|dbj|BAD32525.1| mKIAA1739 protein [Mus musculus]
Length = 755
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 133 EPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTL 192
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 193 QKKWTTFLKARLVCSAP-DWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAVC 251
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 252 EYQLEQIQQVFEGPYKEYSEQAQKWA-RYTDPVPSPRPGSCINNWHRDNGYTSSLELPDN 310
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM++ V R +P+ +++ FTH+V D V
Sbjct: 311 TLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRV 349
>gi|170595713|ref|XP_001902491.1| Sema domain containing protein [Brugia malayi]
gi|158589811|gb|EDP28661.1| Sema domain containing protein [Brugia malayi]
Length = 628
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 116/186 (62%), Gaps = 5/186 (2%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+F++RE A E + + +++RVARVC+ D GG + W +Y+KAR
Sbjct: 132 PNFVASFVYGNHVYFWYREWAAEVSDGDRQIYARVARVCRSDRGGARPAHERWTSYVKAR 191
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPG--DDTKF-YGVFTTSTTGLMGSAICSFSIEDIERAF 152
LNCS+P PFYFNE+Q + + D + + Y VF+T + + SA+C + +E I+R F
Sbjct: 192 LNCSVPANTPFYFNELQAVTEPVAAIDGSSYVYAVFSTPESSVRMSAVCVYRMETIKRIF 251
Query: 153 -VGKFKEQATSTSAWLPVLSSR-VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
G FK Q T+ S W+P +P PRPG CV D+ L +++++FI +PLM EAV
Sbjct: 252 DYGHFKIQKTAQSFWVPYRPHESMPVPRPGSCVTDSSKLSENIVSFIARNPLMHEAVPAV 311
Query: 211 DNKPVF 216
+KP+
Sbjct: 312 RSKPIL 317
>gi|426356748|ref|XP_004045717.1| PREDICTED: semaphorin-3A-like, partial [Gorilla gorilla gorilla]
Length = 344
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 103 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 162
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 163 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 222
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 223 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 281
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 282 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDL 332
>gi|30172710|gb|AAP22350.1| unknown [Homo sapiens]
Length = 301
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 60 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 119
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 120 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 179
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 180 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 238
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 239 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 290
>gi|380804593|gb|AFE74172.1| semaphorin-6C isoform 1 precursor, partial [Macaca mulatta]
Length = 298
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 106/175 (60%), Gaps = 12/175 (6%)
Query: 67 FSRVARVCKRDTGGK-NILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG--DDTK 123
FSRVARVCKRD GG L ++W ++LK RLNCS+PG+ FYF+ +Q + +
Sbjct: 1 FSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLHGRSA 60
Query: 124 FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV 183
+GVFTT T + GSA+C+F +++IER F GKFKEQ + AW PV RVP PRPG C
Sbjct: 61 LFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCA 120
Query: 184 --------NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVF-YRRDLLFTHLVVD 229
+ + LPD VL FI++HPL+D AV ++P+ L T + VD
Sbjct: 121 GIGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 175
>gi|354472226|ref|XP_003498341.1| PREDICTED: semaphorin-4C [Cricetulus griseus]
gi|344250347|gb|EGW06451.1| Semaphorin-4C [Cricetulus griseus]
Length = 834
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKA+L C+ P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKAQLACAAP-DWKVYFNQLRSVHTLLGASWQNTTFFGVFQARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEQIQQVFEGPYKEYSEQAQKWA-RYTDPVPSPRPGSCINNWHRHNGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNFI+ HPLM++ V R +P+ +++ FTH+ D V
Sbjct: 390 ILNFIKKHPLMEDQVQPRWGRPLLVKKNTNFTHMAADRV 428
>gi|410338769|gb|JAA38331.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3A [Pan troglodytes]
Length = 771
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL C++PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICAVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>gi|209863103|ref|NP_001100372.1| semaphorin-4C precursor [Rattus norvegicus]
gi|149046375|gb|EDL99268.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C
(predicted) [Rattus norvegicus]
Length = 834
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+ VF + SA+C
Sbjct: 272 QKKWTTFLKARLVCSAP-DWKVYFNQLRAVHTLLGASWHNTTFFAVFQARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G FKE + W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEHIQQVFEGPFKEYSEQAQKWA-RYTDPVPTPRPGSCINNWHRDNGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ +++ FTH+V D +
Sbjct: 390 TLNFIKKHPLMEEQVKPRLGRPLLVKKNTNFTHVVADRI 428
>gi|68400482|ref|XP_687092.1| PREDICTED: semaphorin-3D [Danio rerio]
Length = 758
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 126/222 (56%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P+FVGSY I V+FFF+ETAVE K ++SRVARVCK D GGK L
Sbjct: 227 EPEFVGSYSIPDTHSLDDDKVYFFFKETAVESNQLDKRIYSRVARVCKNDIGGKRSLINR 286
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL C++PG +F+E++DI+ + D + YGVF+TS++ GSA+C
Sbjct: 287 WSTFLKARLVCTVPGPGGMDTHFDELEDIFLLETKDPQNPVIYGVFSTSSSVFRGSAVCV 346
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+S+ I AF G F + + W+ ++P PRPG C ++ T PD V+
Sbjct: 347 YSMASIRAAFNGPFAHKESPDYRWME-YKGKIPYPRPGTCPSETYDALYKSTRDFPDDVV 405
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYE 234
+F+R+H LM E V +PVF R + + LVVD V E
Sbjct: 406 SFMRAHQLMWEPVVPIHRRPVFTRINTPYRLKKLVVDRVDAE 447
>gi|432862105|ref|XP_004069725.1| PREDICTED: semaphorin-3D-like [Oryzias latipes]
Length = 823
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 119/217 (54%), Gaps = 22/217 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E KS+ SRVARVCK D GG L+ W T+LKARL CSIPG
Sbjct: 307 IYFFFREVSWE--GNDKSIVSRVARVCKNDMGGLRSLTNKWTTFLKARLVCSIPGPDGVD 364
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ +P D K Y VFTTS++ GSA+C +S+ DI AF G + +
Sbjct: 365 THFDELQDIFLLPTRDDKNPRVYAVFTTSSSIFRGSAVCIYSMADIRAAFNGPYAHKEGP 424
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD V++FIR HPLM +V +P
Sbjct: 425 DHRWVE-YEGRIPYPRPGTCPSKTYDPRIKTTKEFPDEVVSFIRFHPLMHRSVHPLTGRP 483
Query: 215 VF--YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
VF R D TH+VVD +V Y V F T
Sbjct: 484 VFTHVRVDYTLTHIVVD----KVLADDGHYDVMFLGT 516
>gi|326668395|ref|XP_001340298.4| PREDICTED: semaphorin-5B-like [Danio rerio]
Length = 1228
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 128/227 (56%), Gaps = 18/227 (7%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P F+ +Y++ ++ + F RE AVE +CGK+VFSRVARVC+ D GG+ +L W T++KAR
Sbjct: 363 PHFISAYEVSRFTYVFLRENAVEQ-DCGKTVFSRVARVCQNDIGGRFLLEDTWTTFMKAR 421
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS G+ PFY++E+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 422 LNCSRSGDVPFYYHELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNGP 480
Query: 156 FKEQATSTSAWLPVLSSRVPEPRPG-QC--VNDT---ETLPDSVLNFIRSHPLMDEAVAH 209
F+ Q ++WL P P P QC VND+ L + L + LM + V
Sbjct: 481 FRYQENPRTSWL-----STPNPVPNFQCGTVNDSGPGANLTERSLQDAQRLFLMSDVVQP 535
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEYIVYFAATTT 251
P+ + ++ F+ L VD+VQ Y V +EY A +T
Sbjct: 536 ISTDPLVMQDNIRFSKLAVDIVQGRDTLYHVMYIGTEYGTIIKALST 582
>gi|348529072|ref|XP_003452038.1| PREDICTED: semaphorin-4G-like [Oreochromis niloticus]
Length = 903
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 119/221 (53%), Gaps = 25/221 (11%)
Query: 35 QPDFVGSY-----------DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNI 83
+ DFVGS D K FFF + + S +RVARVCK D GG
Sbjct: 257 EADFVGSVLVRESVGSSAGDDDKIYFFFTEISQQQTPTYSHSRVARVARVCKEDRGGHLT 316
Query: 84 LSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAI 140
L + W ++LK RL CS+P E+ F+FN ++ ++ +PG DT FYG+F + SA+
Sbjct: 317 LQKRWTSFLKTRLTCSLP-EYDFHFNILRSVFTLPGQTPQDTFFYGIFGLEWKNVKASAV 375
Query: 141 CSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPD 191
C F++ +++ AF G + E S S W + ++P+PRPG C+ D + +LPD
Sbjct: 376 CRFTLSEVQEAFQGPYMENQDSGSKW-KEYTGKIPDPRPGTCITDALRARNMNFSTSLPD 434
Query: 192 SVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
VLNF+R HPLM + V D +P+ +RR +TH+ V Q
Sbjct: 435 DVLNFVRRHPLMSKQVEPADRRPLLFRRTTDYTHMGVHTAQ 475
>gi|344270782|ref|XP_003407221.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3D-like [Loxodonta
africana]
Length = 777
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M + V P F R D+ + T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMYKPVYPVAGGPTFKRIDVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ NT + + E
Sbjct: 477 LKVVSISKEKWNTEEVVLEE 496
>gi|347921995|ref|NP_990308.2| semaphorin-3A [Gallus gallus]
Length = 808
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 279 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 338
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 339 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 398
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +++P+
Sbjct: 399 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINSRPI 457
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 458 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 500
>gi|94733771|emb|CAK04123.1| novel protein similar to vertebratesema domain, immunoglobulin
domain (Ig), short basic domain, secreted, (semaphorin)
3D (SEMA3D) [Danio rerio]
Length = 409
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 126/222 (56%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P+FVGSY I V+FFF+ETAVE K ++SRVARVCK D GGK L
Sbjct: 171 EPEFVGSYSIPDTHSLDDDKVYFFFKETAVESNQLDKRIYSRVARVCKNDIGGKRSLINR 230
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL C++PG +F+E++DI+ + D + YGVF+TS++ GSA+C
Sbjct: 231 WSTFLKARLVCTVPGPGGMDTHFDELEDIFLLETKDPQNPVIYGVFSTSSSVFRGSAVCV 290
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+S+ I AF G F + + W+ ++P PRPG C ++ T PD V+
Sbjct: 291 YSMASIRAAFNGPFAHKESPDYRWME-YKGKIPYPRPGTCPSETYDALYKSTRDFPDDVV 349
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYE 234
+F+R+H LM E V +PVF R + + LVVD V E
Sbjct: 350 SFMRAHQLMWEPVVPIHRRPVFTRINTPYRLKKLVVDRVDAE 391
>gi|8134683|sp|Q90607.1|SEM3A_CHICK RecName: Full=Semaphorin-3A; AltName: Full=Collapsin-1;
Short=COLL-1; Flags: Precursor
gi|410079|gb|AAC59638.1| collapsin [Gallus gallus]
Length = 772
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +++P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINSRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 464
>gi|327291725|ref|XP_003230571.1| PREDICTED: semaphorin-6D-like, partial [Anolis carolinensis]
Length = 216
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 103/147 (70%), Gaps = 5/147 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G +V+FFFRE A+E+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 71 EPHFLHAIEYGNFVYFFFREIAMEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 130
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS+EDIE+
Sbjct: 131 ARLNCSVPGDSFFYFDVLQSITDIIEINGAPT-VVGVFTTQLNSIPGSAVCAFSMEDIEK 189
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEP 177
F G+FKEQ T S W V +VP P
Sbjct: 190 VFKGRFKEQKTPDSVWTAVPEDKVPRP 216
>gi|432095747|gb|ELK26794.1| Semaphorin-6D [Myotis davidii]
Length = 1116
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 120/206 (58%), Gaps = 19/206 (9%)
Query: 58 EYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQ---D 113
E+ ++V+SRVAR+CK D GG + +L ++W ++LKARLNCS+PG+ FYF+ +Q +
Sbjct: 273 EWFPFSQAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSITN 332
Query: 114 IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSR 173
I ++ G T GVFTT + GSA+C+FS++DIE+ F G+FKEQ T S W V +
Sbjct: 333 IMQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDK 391
Query: 174 VPEPRPGQCVN-----DTET---LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF-- 223
VP PRPG C D ET PD L FI+SHPLMD AV +P F + + +
Sbjct: 392 VPTPRPGCCAKHGLAEDYETSIGFPDETLLFIKSHPLMDSAVPPIAEEPWFTKTRIRYRL 451
Query: 224 THLVVDVVQYEVFGTTSEYIVYFAAT 249
T + VD G Y V F +
Sbjct: 452 TAIAVD----HSAGPHQNYTVIFVGS 473
>gi|355560865|gb|EHH17551.1| hypothetical protein EGK_13978 [Macaca mulatta]
Length = 772
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 127/236 (53%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ + C+ D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQKCRNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 473
>gi|334329781|ref|XP_003341264.1| PREDICTED: semaphorin-5B [Monodelphis domestica]
Length = 1082
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 130/237 (54%), Gaps = 31/237 (13%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEIPFYYNELQSAFHLPEQDL-VYGVFTTNVNSIAASAVCAFNLSAISQAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC-----VNDTETLPDSVLNFIRSHPLMDEAVAH 209
F +T + QC V E L + L + LM E V
Sbjct: 344 -FMGLSTFYA----------------QCGTLRDVGPNENLTERSLQDAQRLFLMSEVVQP 386
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQ 263
P + + F+HLVVD+VQ G + Y V + T T L+ + R L+
Sbjct: 387 VTPDPCITQDSVRFSHLVVDLVQ----GKDTLYHVLYIGTESGTILKALSTASRSLR 439
>gi|18859353|ref|NP_571135.1| semaphorin-3aa precursor [Danio rerio]
gi|8134734|sp|Q9W7J1.1|SE3AA_DANRE RecName: Full=Semaphorin-3aa; AltName: Full=Semaphorin-1A; AltName:
Full=Semaphorin-Z1A; Short=Sema Z1A; Flags: Precursor
gi|5499717|gb|AAD43964.1|AF086761_1 semaphorin Z1a [Danio rerio]
Length = 860
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+G + I + +F FF+E A++ + GK+ SR+ ++CK D GG L
Sbjct: 224 EPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKA+L CS+PG +F+E+QD++ + D K Y VFTTS+ GSAIC
Sbjct: 284 WTTFLKAKLTCSVPGLNGIDTHFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICM 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 344 YSMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 402
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HP M V KP+ R ++ FT LVVD V+ E +Y V F T T
Sbjct: 403 FARLHPAMYNPVQPMGGKPIVVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGT 458
Query: 251 TLRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 459 VLKVVTIPRESWHDL 473
>gi|134085180|emb|CAM60070.1| sema3aa [Danio rerio]
Length = 857
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+G + I + +F FF+E A++ + GK+ SR+ ++CK D GG L
Sbjct: 224 EPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKA+L CS+PG +F+E+QD++ + D K Y VFTTS+ GSAIC
Sbjct: 284 WTTFLKAKLTCSVPGLNGIDTHFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICM 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 344 YSMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 402
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HP M V KP+ R ++ FT LVVD V+ E +Y V F T T
Sbjct: 403 FARLHPAMYNPVQPMGGKPIVVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGT 458
Query: 251 TLRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 459 VLKVVTIPRESWHDL 473
>gi|190336976|gb|AAI62398.1| Semaphorin 3aa [Danio rerio]
Length = 860
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+G + I + +F FF+E A++ + GK+ SR+ ++CK D GG L
Sbjct: 224 EPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKA+L CS+PG +F+E+QD++ + D K Y VFTTS+ GSAIC
Sbjct: 284 WTTFLKAKLTCSVPGLNGIDTHFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICM 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 344 YSMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 402
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HP M V KP+ R ++ FT LVVD V+ E +Y V F T T
Sbjct: 403 FARLHPAMYNPVQPMGGKPIVVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGT 458
Query: 251 TLRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 459 VLKVVTIPRESWHDL 473
>gi|190337944|gb|AAI62381.1| Semaphorin 3aa [Danio rerio]
Length = 860
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+G + I + +F FF+E A++ + GK+ SR+ ++CK D GG L
Sbjct: 224 EPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKA+L CS+PG +F+E+QD++ + D K Y VFTTS+ GSAIC
Sbjct: 284 WTTFLKAKLTCSVPGLNGIDTHFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICM 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 344 YSMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 402
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HP M V KP+ R ++ FT LVVD V+ E +Y V F T T
Sbjct: 403 FARLHPAMYNPVQPMGGKPIVVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGT 458
Query: 251 TLRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 459 VLKVVTIPRESWHDL 473
>gi|348505773|ref|XP_003440435.1| PREDICTED: semaphorin-3ab-like [Oreochromis niloticus]
Length = 791
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 22/220 (10%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G + I + ++ FFRE A++ + GK+ +RV ++CK D GG L W
Sbjct: 218 PRFLGIHLISESDNPEDDKIYLFFRENAIDGEHTGKATHARVGQLCKNDLGGHRSLVNKW 277
Query: 89 ATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD++ + D K Y VFTTS+ GSA+C +
Sbjct: 278 TTFLKARLICSVPGNNGIDTHFDELQDVFLMSTKDPKSPVVYAVFTTSSNIFKGSAVCMY 337
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
S+ DI R F+G + + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 338 SMTDIRRVFLGPYAHRDGPSYQWVP-FQGRVPYPRPGTCPSKTFGGFDTTKDLPDEVVQF 396
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYE 234
RSHP M V +N+P+ + D+ FT +VVD V+ E
Sbjct: 397 ARSHPAMFNPVYPINNRPIIVKTDVDYQFTQIVVDKVEAE 436
>gi|148237334|ref|NP_001087589.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Xenopus laevis]
gi|51512998|gb|AAH80392.1| MGC82143 protein [Xenopus laevis]
Length = 685
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F G+Y I ++FFFRE E KSVFSRV RVCK D GG+ L W T
Sbjct: 242 FFGTYAIPDTYNPDDDKIYFFFREAHPEGSFSEKSVFSRVGRVCKNDIGGQRSLINKWTT 301
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG+ YF+E+QDI+ +P D + YG+FTT+++ SA+C +S+
Sbjct: 302 FLKARLVCSIPGQDGGDTYFDELQDIFLLPTKDERNPVVYGIFTTTSSIFKASAVCVYSM 361
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + + W+ R+P PRPG C + T+ PD V++F
Sbjct: 362 ADIRGVFNGPYAHKESPDHRWV-QYDGRIPYPRPGTCPSKTYDPTIKSTKDFPDDVISFS 420
Query: 198 RSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
++HPLM +A+ KPVF R D T + VD +V +Y V F T + TV
Sbjct: 421 KNHPLMYKAIYPLHGKPVFTRLNVDYKLTQIAVD----QVVAEDGQYDVMFLG-TDVGTV 475
Query: 256 FVKVRLLQDVSNTSDSICES 275
+ + +D+ + + E
Sbjct: 476 LKVISVAKDIWTMEEVLLEE 495
>gi|432943182|ref|XP_004083100.1| PREDICTED: semaphorin-3aa [Oryzias latipes]
Length = 859
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 132/254 (51%), Gaps = 29/254 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P F+G + I + +F FF+E A++ + GK+ +R+A++CK D GG L W
Sbjct: 222 PRFIGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATIARIAQLCKNDMGGHRSLVNKW 281
Query: 89 ATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD++ + D K Y VFTTS+ GSA+C +
Sbjct: 282 TTFLKARLVCSVPGVNGIDTHFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMY 341
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
++ DI R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 342 NMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITF 400
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
R HP M V +P+ R D+ FT LVVD V+ E +Y V F T T
Sbjct: 401 ARGHPAMYNPVHPIGGQPIMVRTDVDYQFTQLVVDRVEAE----DGQYDVMFIGTDMGTV 456
Query: 252 LRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 457 LKVVTIPRESWHDL 470
>gi|149029003|gb|EDL84297.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D, isoform CRA_a [Rattus
norvegicus]
Length = 605
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 71 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 130
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 131 FLKARLVCSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 190
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 191 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 249
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 250 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 304
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 305 LKVVSISKEKWNMEEVVLEE 324
>gi|26327557|dbj|BAC27522.1| unnamed protein product [Mus musculus]
Length = 777
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERKPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|282847344|ref|NP_083158.3| semaphorin-3D precursor [Mus musculus]
gi|76363404|sp|Q8BH34.1|SEM3D_MOUSE RecName: Full=Semaphorin-3D; Flags: Precursor
gi|26324862|dbj|BAC26185.1| unnamed protein product [Mus musculus]
gi|26342871|dbj|BAC35092.1| unnamed protein product [Mus musculus]
gi|187953821|gb|AAI38132.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Mus musculus]
Length = 777
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|395818535|ref|XP_003782680.1| PREDICTED: semaphorin-3D [Otolemur garnettii]
Length = 777
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + T+
Sbjct: 422 KRHPVMYKSVYPVAGGPTFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTI 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|157277992|ref|NP_001098103.1| semaphorin-3D [Rattus norvegicus]
Length = 777
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLVCSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|148706749|gb|EDL38696.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D, isoform CRA_c [Mus musculus]
Length = 786
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 252 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 311
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 312 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 371
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 372 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 430
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 431 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 485
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 486 LKVVSISKEKWNMEEVVLEE 505
>gi|410918741|ref|XP_003972843.1| PREDICTED: semaphorin-3aa-like [Takifugu rubripes]
Length = 778
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 131/255 (51%), Gaps = 29/255 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P FVG + I + +F FF+E A++ + GK+ SR+ ++CK D GG L W
Sbjct: 222 PRFVGVHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNKW 281
Query: 89 ATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL CS+PG +F+E+QD++ + D K Y VFTTS+ GSA+C +
Sbjct: 282 TTFLKARLLCSVPGVNGIDTHFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMY 341
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
++ DI R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 342 NMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITF 400
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
R HP M V +P+ R D+ F+ LVVD V+ E +Y V F T T
Sbjct: 401 ARGHPAMYNPVHPIGGRPIMVRTDVDYQFSQLVVDRVEAE----DGQYDVMFIGTDVGTV 456
Query: 252 LRTVFVKVRLLQDVS 266
L+ V + D+
Sbjct: 457 LKVVMIPKESWHDLE 471
>gi|440902882|gb|ELR53616.1| Semaphorin-3D [Bos grunniens mutus]
Length = 776
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 147/292 (50%), Gaps = 39/292 (13%)
Query: 6 THRSLYVASDERIKQIALVMCAHRYDNCLQPDFVGSYDI-------GKYVFFFFRETAVE 58
TH YV +D + H + N + F+G++ I V+FFFRE++ E
Sbjct: 222 THDHHYVRTD---------ISEHHWLNGAK--FIGTFPIPDTYNPDDDKVYFFFRESSQE 270
Query: 59 YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYK 116
K++ SRV RVCK D GG+ L W T+LKARL CSIPG +F+E+QDIY
Sbjct: 271 GSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTHFDELQDIYL 330
Query: 117 VPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSR 173
+P D + YGVFTT+++ GSA+C +S+ DI F G + + ++ W+ R
Sbjct: 331 LPTRDERNPVVYGVFTTTSSIFKGSAVCMYSMADIRAVFNGPYAHKESADHCWVQ-YDGR 389
Query: 174 VPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYR--RDLLF 223
+P PRPG C + T PD V++FI+ HP+M ++V +P F R D
Sbjct: 390 IPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHPVMYKSVYPVLGRPTFKRINVDYRL 449
Query: 224 THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
T +VVD V +Y V F T + TV V + ++ N + + E
Sbjct: 450 TQIVVD----HVVAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNIEEVVLEE 496
>gi|148224116|ref|NP_001087062.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4B precursor
[Xenopus laevis]
gi|50415062|gb|AAH77964.1| Sema4b-prov protein [Xenopus laevis]
Length = 835
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 36/299 (12%)
Query: 5 RTHRSLYVASDERIKQIALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGK 64
+T +LY D A V A+ ++ + + VG D ++FFF ET E+
Sbjct: 207 KTENALYWLQDP-----AFVGSAYIQESLPKGNLVGDDD---KIYFFFSETGKEFDFFEN 258
Query: 65 SVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV-PGD--- 120
++ SR+ARVCK D GG+ +L + W T+LKA+L CS PG+ F FN ++D++ + PG+
Sbjct: 259 TIVSRIARVCKGDLGGERVLQRRWTTFLKAQLICSCPGD-GFPFNVLKDMFVLTPGEEHW 317
Query: 121 -DTKFYGVFTT--STTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEP 177
DT FYGVFT+ + G SA+C+FS+++++ AF G FKE T W +S VPEP
Sbjct: 318 KDTIFYGVFTSQWNKGGAGSSAVCAFSMDEVQNAFNGLFKEVNRETQQWYTYTNS-VPEP 376
Query: 178 RPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVV 228
RPG C +N + +PD VLNF++ H LMD A+ ++P+ + + + + V
Sbjct: 377 RPGACITNSAKHRKINSSLHMPDRVLNFVKDHFLMDSAIR---SQPLLLQSQIRYKQISV 433
Query: 229 DVVQ-----YEV--FGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRL 280
V+ Y+V GT + + + + +++L QD+ + + + S G L
Sbjct: 434 QRVKGLKKTYDVLFLGTDDGRLHKAVSVNKMVHIIEEIKLFQDMQPVQELLLDPSKGLL 492
>gi|329663424|ref|NP_001193025.1| semaphorin-3D [Bos taurus]
gi|296488588|tpg|DAA30701.1| TPA: sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Bos taurus]
Length = 776
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 147/292 (50%), Gaps = 39/292 (13%)
Query: 6 THRSLYVASDERIKQIALVMCAHRYDNCLQPDFVGSYDI-------GKYVFFFFRETAVE 58
TH YV +D + H + N + F+G++ I V+FFFRE++ E
Sbjct: 222 THDHHYVRTD---------ISEHHWLNGAK--FIGTFPIPDTYNPDDDKVYFFFRESSQE 270
Query: 59 YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYK 116
K++ SRV RVCK D GG+ L W T+LKARL CSIPG +F+E+QDIY
Sbjct: 271 GSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGADTHFDELQDIYL 330
Query: 117 VPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSR 173
+P D + YGVFTT+++ GSA+C +S+ DI F G + + ++ W+ R
Sbjct: 331 LPTRDERNPVVYGVFTTTSSIFKGSAVCMYSMADIRAVFNGPYAHKESADHCWVQ-YDGR 389
Query: 174 VPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYR--RDLLF 223
+P PRPG C + T PD V++FI+ HP+M ++V +P F R D
Sbjct: 390 IPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHPVMYKSVYPVLGRPTFKRINVDYRL 449
Query: 224 THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
T +VVD V +Y V F T + TV V + ++ N + + E
Sbjct: 450 TQIVVD----HVVAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNIEEVVLEE 496
>gi|8547323|gb|AAF76329.1| semaphorin [Rattus norvegicus]
Length = 296
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E +S+ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 5 IYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTTFLKARLVCSIPGSDGAD 64
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDIY +P D + YGVFTT+++ GSA+C +SI DI F G + + ++
Sbjct: 65 THFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSIADIRAVFNGPYAHKESA 124
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FIR HP+M ++V P
Sbjct: 125 DHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIRRHPVMFKSVYPVAGAP 183
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F R D T +VVD V +Y V F T T L+ V +
Sbjct: 184 TFQRINVDYRLTQIVVD----HVVAEDGQYDVMFLGTDXGTVLKVVSI 227
>gi|194749961|ref|XP_001957400.1| GF10396 [Drosophila ananassae]
gi|190624682|gb|EDV40206.1| GF10396 [Drosophila ananassae]
Length = 1088
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 12/214 (5%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FVGS++ G +V+F RE+AVE+++CGK ++SR+ARVCK D GG +NW ++LKARL+
Sbjct: 229 FVGSFEAGNFVYFLLRESAVEHLSCGKVIYSRIARVCKNDAGGGRWAKENWMSFLKARLH 288
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
CS+PGE+P+YF+E+Q + + Y F TS + + GSA+C+F++ I AF G FK
Sbjct: 289 CSLPGEYPYYFDEVQGMTYAESESV-LYATFRTSGSSIFGSAVCAFNLSSINEAFDGAFK 347
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
Q + +AW V + + + QC + + + + + + L+D+AV +P+++
Sbjct: 348 HQEHADAAWQTVNTKQRNQ---FQCTSSSPSYGQWLDS--SKYQLVDQAVQPIGGQPLYH 402
Query: 218 RRDLLFTHLVVDVVQYEVFGTTSEYI-VYFAATT 250
+ F + +D+V T SE + V F A++
Sbjct: 403 SKLEQFGRVALDIVT-----TKSEQVHVLFVASS 431
>gi|432857871|ref|XP_004068767.1| PREDICTED: semaphorin-3D-like [Oryzias latipes]
Length = 770
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 122/222 (54%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+PDFV S+ I ++FFF+E AVE + V+SRVARVCK D GGK L
Sbjct: 211 EPDFVSSFSIPDTHSPDDDKIYFFFKEKAVEAEQWDRRVYSRVARVCKNDLGGKRSLINR 270
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKARL CS+PG +F+E+QDI+ + D + YGVF+TS++ GSA+C
Sbjct: 271 WTTFLKARLVCSVPGPSGVDTHFDELQDIFVLETKDPQNPTIYGVFSTSSSIFHGSAVCV 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+S+ I AF G F + W+ RVP PRPG C ++ T+ PD V+
Sbjct: 331 YSMASIRAAFNGPFAHKEGPDYRWV-EYKGRVPYPRPGACPSETYDAQHKSTKDFPDEVV 389
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYE 234
+F+R H LM E V N+PV R LF +VVD V E
Sbjct: 390 SFMRQHQLMWEPVLPLGNRPVITRVGSSSLFRKVVVDRVDAE 431
>gi|410907441|ref|XP_003967200.1| PREDICTED: semaphorin-3D-like [Takifugu rubripes]
Length = 808
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 128/242 (52%), Gaps = 23/242 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE V + KSV SRVARVCK D GG L+ W T+LKARL CSIPG
Sbjct: 277 IYFFFRE--VSWEGNDKSVLSRVARVCKNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 334
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ +P D K Y VFTTS++ GSA+C +S+ DI F G + +
Sbjct: 335 THFDELQDIFLLPTRDDKNPVVYAVFTTSSSIFRGSAVCVYSMADIRAVFNGPYAHKEGP 394
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD VL+FIR HPLM +V +P
Sbjct: 395 DHRWVE-YEGRIPYPRPGTCPSKTYDSKIKTTKDFPDEVLSFIRFHPLMYHSVYPMTRRP 453
Query: 215 VF--YRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
VF R D T +VVD V +Y V F T +V V + Q+ +T + +
Sbjct: 454 VFTRVRVDYTLTQIVVD----RVLAEDGQYEVMFLGTDA-GSVLKVVSITQENWSTEEIV 508
Query: 273 CE 274
E
Sbjct: 509 LE 510
>gi|156523031|dbj|BAF76035.1| semaphorin 3D [Rattus norvegicus]
Length = 660
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 28/259 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLVCSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICE 274
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLE 495
>gi|410907439|ref|XP_003967199.1| PREDICTED: semaphorin-3ab-like [Takifugu rubripes]
Length = 796
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++ FF+E A++ + GK+ +RV ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFKENAIDGEHAGKATHARVGQLCKNDLGGHRSLVNKWTTFLKARLICSVPGSNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ V D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLVSTKDPKSPMIYAVFTTSSNIFKGSAVCLYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ PD V+ F RSHP M V +N+P+
Sbjct: 364 NYQWVP-YQGRVPYPRPGTCPSKTFGGYDTTKEFPDEVVTFARSHPAMFNPVYAINNRPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IVKTDVDYQFTQIVVDKVEAE----DGQYDVMFIGTDMGTILKVVCI 465
>gi|410952176|ref|XP_003982759.1| PREDICTED: semaphorin-3D [Felis catus]
Length = 777
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMFKSVYPVAGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|291394887|ref|XP_002713888.1| PREDICTED: semaphorin 3D [Oryctolagus cuniculus]
Length = 777
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQESATSDKTILSRVGRVCKNDLGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMYKSVYPAAGAPTFKRINVDYRLTQVVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|190339706|gb|AAI63261.1| Semaphorin 3ab [Danio rerio]
Length = 778
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
++ FFRE A++ K+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFRENAIDGEQISKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P L SRVP PRPG C + T+ PD V+ F RSHP M V +N+P+
Sbjct: 364 NYQWVPFL-SRVPYPRPGTCPSKTFDGYESTKDFPDDVITFARSHPAMYNPVFPINNRPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IIKTDVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTVLKVVSI 465
>gi|89365929|gb|AAI14522.1| SEMA6C protein [Homo sapiens]
Length = 474
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+ +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCASYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
F GKFKEQ + AW PV RVP PRPG C
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAG 375
>gi|354488510|ref|XP_003506411.1| PREDICTED: semaphorin-3D [Cricetulus griseus]
Length = 777
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSRTYDPMIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T + VD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIAVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|348506152|ref|XP_003440624.1| PREDICTED: semaphorin-3D-like [Oreochromis niloticus]
Length = 812
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 129/242 (53%), Gaps = 23/242 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE + E KS+ SRVARVCK D GG L+ W T+LKARL CSIPG
Sbjct: 284 VYFFFREVSWE--GNDKSILSRVARVCKNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 341
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ +P D K Y VFTTS++ GSA+C +S+ DI F G + +
Sbjct: 342 THFDQLQDVFLLPTRDDKNPIVYAVFTTSSSIFRGSAVCVYSMADIRAVFNGPYAHKEGP 401
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD V+ FIR HPLM +V +P
Sbjct: 402 DHRWVE-YEGRIPYPRPGTCPSKTYDPRIRTTKDFPDEVVRFIRFHPLMYRSVYPLTGRP 460
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
VF R D TH+VVD V +Y V F T + ++ V + Q+ +T + +
Sbjct: 461 VFTRVKVDYTLTHIVVD----RVLADDGQYEVMFLG-TDVGSILKVVSITQENWSTEEVV 515
Query: 273 CE 274
E
Sbjct: 516 LE 517
>gi|301756314|ref|XP_002914006.1| PREDICTED: semaphorin-3D-like [Ailuropoda melanoleuca]
Length = 777
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMFKSVYPVAGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|47224113|emb|CAG13033.1| unnamed protein product [Tetraodon nigroviridis]
Length = 725
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 131/251 (52%), Gaps = 32/251 (12%)
Query: 22 ALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK 81
A + AH + PD ++FFFRE + E KS+ SRVARVCK D GG
Sbjct: 197 AKFIAAHPIADTYNPD-------DDKIYFFFREVSWE--GNDKSMLSRVARVCKNDVGGL 247
Query: 82 NILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLM 136
L+ W T+LKARL CSIPG +F+E+QDI+ +P DTK Y VFTTS++
Sbjct: 248 RSLTNKWTTFLKARLVCSIPGPEGVDTHFDELQDIFLLPNKDTKNPVVYAVFTTSSSIFR 307
Query: 137 GSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTET 188
GSA+C +S+ DI F G + + W+ R+P PRPG C + T+
Sbjct: 308 GSAVCVYSMADIRAVFNGPYAHKEGPDHRWVE-YEGRIPYPRPGTCPSKTYDSRIKTTKD 366
Query: 189 LPDSVLNFIRSHPLMDEAVAHRDNKPVF--YRRDLLFTHLVVDVV-----QYEV--FGTT 239
PD V++F+R HPLM +V +PVF R D T +VVD V QYEV GT
Sbjct: 367 FPDEVVSFVRFHPLMYHSVHPLTRRPVFTRVRVDYTLTKIVVDRVLAEDGQYEVMFLGTD 426
Query: 240 SEYIVYFAATT 250
+ ++ + T
Sbjct: 427 AGSVLKVVSIT 437
>gi|308485698|ref|XP_003105047.1| CRE-SMP-1 protein [Caenorhabditis remanei]
gi|308256992|gb|EFP00945.1| CRE-SMP-1 protein [Caenorhabditis remanei]
Length = 711
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 7/180 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W TYLK
Sbjct: 220 PNFVATFVYKEHVYFWFREIASEAIDNNEESQIYARVARVCKNDKGGARPANERWTTYLK 279
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D +D Y VF+T + + SA+C FS++ I
Sbjct: 280 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFSMKKIR 339
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ ++
Sbjct: 340 EEFDNGTFKHQNNAQSMWMAYNRNEVPKPRPGSCTPDSTKLPENTVSFILHHPLLHRPIS 399
>gi|344251606|gb|EGW07710.1| Semaphorin-3D [Cricetulus griseus]
Length = 759
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 225 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 284
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 285 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 344
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 345 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSRTYDPMIKSTRDFPDDVISFI 403
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T + VD V +Y V F T + TV
Sbjct: 404 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIAVD----HVVAEDGQYDVMFLG-TDIGTV 458
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 459 LKVVSISKEKWNMEEVVLEE 478
>gi|348514941|ref|XP_003444998.1| PREDICTED: semaphorin-3aa-like [Oreochromis niloticus]
Length = 777
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 29/255 (11%)
Query: 36 PDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P FVG + I + +F FF+E A++ + GK+ +R+ ++CK D GG L W
Sbjct: 222 PRFVGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATIARIGQLCKNDMGGHRSLVNKW 281
Query: 89 ATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSF 143
T+LKARL C++PG +F+E+QD++ + D K Y VFTTS+ GSA+C +
Sbjct: 282 TTFLKARLICAVPGVNGIDTHFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMY 341
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNF 196
++ DI R F+G + + W+P RVP PRPG C + T+ LPD V+ F
Sbjct: 342 NMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITF 400
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TT 251
R HP M V +P+ R D+ FT LVVD V+ E +Y V F T T
Sbjct: 401 ARGHPAMYNPVHPIGGRPIMVRTDVDYQFTQLVVDKVEAE----DGQYDVMFIGTDKGTV 456
Query: 252 LRTVFVKVRLLQDVS 266
L+ V + D+
Sbjct: 457 LKVVTIPRESWHDLE 471
>gi|326669440|ref|XP_689642.4| PREDICTED: semaphorin-4B [Danio rerio]
Length = 804
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 131/245 (53%), Gaps = 32/245 (13%)
Query: 32 NCLQ-PDFVGSYDI--------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN 82
N LQ P FVGS I ++FFF ET E+ ++ SR+ARVCK D GG+
Sbjct: 199 NWLQDPAFVGSAHITGSDSERNDDQIYFFFSETGKEFDFFDNTIVSRIARVCKEDQGGER 258
Query: 83 ILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTS-TTGLMG- 137
+L + W T+LKA+L CS+P + F FN IQD+Y +P +T Y VF + + GL G
Sbjct: 259 VLQKKWTTFLKAQLLCSLPDDG-FPFNIIQDVYVLPAKRKKNTLLYAVFASQWSKGLAGS 317
Query: 138 SAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTE---------T 188
SA+C FS++ ++RAF G++KE T W S VPEPRPG C+ +
Sbjct: 318 SAVCVFSMDQVDRAFTGRYKEVNRETQQWYTYTQS-VPEPRPGMCITNASRQLGIDSSLD 376
Query: 189 LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAA 248
+PD VLNF++ H LMD V ++PV + + +T + V + V G Y V F
Sbjct: 377 MPDKVLNFVKDHFLMDRPVR---SQPVLFTHTVHYTQIAV----HHVKGLHRAYDVMFIG 429
Query: 249 TTTLR 253
T R
Sbjct: 430 TADGR 434
>gi|194209582|ref|XP_001491387.2| PREDICTED: semaphorin-3D [Equus caballus]
Length = 777
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMYKSVYPVAGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDVGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|334348346|ref|XP_003342047.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3D-like [Monodelphis
domestica]
Length = 777
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNQDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QD++ +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTHFDELQDVFLLPTKDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMYKSVYPVAGGPTFTRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSIAKEKWNMEEVVLEE 496
>gi|73982001|ref|XP_533138.2| PREDICTED: semaphorin-3D [Canis lupus familiaris]
Length = 777
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFRGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M + + P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHPVMFKPIYPVAGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|332206565|ref|XP_003252365.1| PREDICTED: semaphorin-3D [Nomascus leucogenys]
Length = 777
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFSIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|341882443|gb|EGT38378.1| hypothetical protein CAEBREN_28508 [Caenorhabditis brenneri]
Length = 715
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W +YLK
Sbjct: 225 PNFVSTFAYKEHVYFWFREIASEAIDNNEESQIYARVARVCKNDKGGARPANERWTSYLK 284
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D +D Y VF+T + + SA+C FS++ I
Sbjct: 285 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFSMKKIR 344
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 345 EEFDNGTFKHQNNAQSMWMAFNRNEVPKPRPGSCTPDSTKLPENTVSFILHHPLLHRPI 403
>gi|355751509|gb|EHH55764.1| hypothetical protein EGM_05031 [Macaca fascicularis]
Length = 833
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 114/218 (52%), Gaps = 22/218 (10%)
Query: 35 QPDFVGSYDIGK----------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSLTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P + + + +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLACSAPDWLHYXXXLGAVHTLQDTSWHNTTFFGVFQARWGDMYLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSV 193
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 332 YQLEEIQRVFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNT 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 391 LNFIKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>gi|28279199|gb|AAH45964.1| Sema6d protein [Danio rerio]
Length = 366
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 3/147 (2%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLK 93
+P F+ + + G YV+FFF E AVE+ GK V+SRVARVCK D GG +L ++W ++LK
Sbjct: 216 EPHFLHAVEYGNYVYFFFSEIAVEHTAAGKVVYSRVARVCKNDNGGSTRVLDRHWTSFLK 275
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYF+ +Q + V + + GVFTT T + GSA+C F ++DIER
Sbjct: 276 ARLNCSVPGDTFFYFDVLQSLTNVLQINQRPAVVGVFTTQTNSIPGSAVCGFYLDDIERV 335
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPR 178
F G+FKEQ S S W V +VP+PR
Sbjct: 336 FNGRFKEQKNSDSMWTAVPEEQVPKPR 362
>gi|148691773|gb|EDL23720.1| sema domain, transmembrane domain (TM), and cytoplasmic domain,
(semaphorin) 6B [Mus musculus]
Length = 631
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 128/248 (51%), Gaps = 34/248 (13%)
Query: 66 VFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVP--GDDT 122
V SRVARVCK D GG +L + W ++LKARLNCS+PG+ FYFN +Q + V G
Sbjct: 5 VVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQAVTGVVSLGGRP 64
Query: 123 KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC 182
VF+T + + GSA+C+F + + F G+F+EQ + S W PV +VP PRPG C
Sbjct: 65 VILAVFSTPSNSIPGSAVCAFDMNQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCC 124
Query: 183 V------NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVV--- 231
N + LPD +LNF+++HPLMDEAV + P R + T + VDV
Sbjct: 125 AAPGMQYNASSALPDEILNFVKTHPLMDEAVPSLGHSPWIVRTLMRHQLTRVAVDVGAGP 184
Query: 232 ---QYEVF-----GTTSEYIVYFAAT---TTLRTVFVKVRLLQDVSNTSDSICESSVGRL 280
Q VF GT +++V A+ TT ++F L++ C GR
Sbjct: 185 WGNQTIVFLGSEAGTVLKFLVKPNASVSGTTGPSIF-----LEEFETYRPDRC----GRP 235
Query: 281 KQTVTWGQ 288
WGQ
Sbjct: 236 SSAGEWGQ 243
>gi|341901579|gb|EGT57514.1| CBN-SMP-1 protein [Caenorhabditis brenneri]
Length = 715
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W +YLK
Sbjct: 225 PNFVSTFAYKEHVYFWFREIASEAIDNNEEPQIYARVARVCKNDKGGARPANERWTSYLK 284
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D +D Y VF+T + + SA+C FS++ I
Sbjct: 285 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFSMKKIR 344
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 345 EEFDNGTFKHQNNAQSMWMAFNRNEVPKPRPGSCTPDSTKLPENTVSFILHHPLLHRPI 403
>gi|268569918|ref|XP_002640648.1| C. briggsae CBR-SMP-1 protein [Caenorhabditis briggsae]
Length = 712
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W +YLK
Sbjct: 221 PNFVATFAYKEHVYFWFREIASEAIDNNEESQIYARVARVCKNDKGGARPANERWTSYLK 280
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D +D Y VF+T + + SA+C FS++ I
Sbjct: 281 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNDHVVYTVFSTPDSDVRMSAVCKFSMKKIR 340
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 341 EEFDNGTFKHQNNAQSMWMAYNRNEVPKPRPGSCTPDSTKLPENTVSFILHHPLLHRPI 399
>gi|395539080|ref|XP_003771501.1| PREDICTED: semaphorin-3D [Sarcophilus harrisii]
Length = 777
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 129/245 (52%), Gaps = 30/245 (12%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNQDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDI+ +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGNDGADTHFDELQDIFLLPTKDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTL 252
+ HP+M ++V P F R D T +VVD V +Y V F T T L
Sbjct: 422 KRHPVMYKSVYPVAGGPTFTRINVDYRLTQIVVD----HVIAEDGQYDVMFLGTDIGTVL 477
Query: 253 RTVFV 257
+ V +
Sbjct: 478 KVVSI 482
>gi|426227493|ref|XP_004007852.1| PREDICTED: semaphorin-3D [Ovis aries]
Length = 775
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 242 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTIISRVGRVCKNDVGGQRSLINKWTT 301
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 302 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCMYSM 361
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C V T PD V++FI
Sbjct: 362 ADIRAVFNGPYAHKESADHCWVQ-YDGRIPYPRPGTCPSKTYDPLVKSTRDFPDDVISFI 420
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V +P F + D T +VVD V +Y V F T + TV
Sbjct: 421 KRHPVMYKSVYPVLGRPSFKQINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 475
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 476 LKVVSISKEKWNIEEVVLEE 495
>gi|208463448|gb|ACI29017.1| semaphorin 4b [Danio rerio]
Length = 250
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 122/220 (55%), Gaps = 23/220 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF ET E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS+P + F
Sbjct: 17 IYFFFSETGKEFDFFDNTIVSRIARVCKEDQGGERVLQKKWTTFLKAQLLCSLPDD-GFP 75
Query: 108 FNEIQDIYKVPG---DDTKFYGVFTTS-TTGLMG-SAICSFSIEDIERAFVGKFKEQATS 162
FN IQD+Y +P +T Y VF + + GL G SA+C FS++ ++RAF G++KE
Sbjct: 76 FNIIQDVYVLPAKRKKNTLLYAVFASQWSKGLAGSSAVCVFSMDQVDRAFTGRYKEVNRE 135
Query: 163 TSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRDNK 213
T W S VPEPRPG C+ + +PD VLNF++ H LMD V ++
Sbjct: 136 TQQWYTYTQS-VPEPRPGMCITNASRQLGIDSSLDMPDKVLNFVKDHFLMDRPVR---SQ 191
Query: 214 PVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
PV + + +T + V + V G Y V F T R
Sbjct: 192 PVLFTHTVHYTQIAV----HHVKGLHRAYDVMFIGTADGR 227
>gi|327265733|ref|XP_003217662.1| PREDICTED: semaphorin-3B-like [Anolis carolinensis]
Length = 812
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 125/236 (52%), Gaps = 23/236 (9%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
+FFFFRETAVE GK F+R+ ++C+ D GG+ L W T+LKARL C++ G
Sbjct: 285 IFFFFRETAVEGSQGLGKQTFARIGQICRNDMGGQRSLVNKWTTFLKARLVCAVQGSDGS 344
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
YF++++D++ +P + + Y VFTTS+T GSA+C + + DI RAF+G F +
Sbjct: 345 DTYFDQLRDVFLLPTREKRNPLLYAVFTTSSTVFKGSAVCVYHMNDIRRAFLGPFAHKEG 404
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ RVP PRPG C + T+ PD V+ F R+HPLM V KP
Sbjct: 405 PNYQWVS-FQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPHGQKP 463
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
VF + ++ FT + VD V Y V F T T L+ V V Q++
Sbjct: 464 VFLQTNVGYSFTRIAVD----RVAAADGHYDVLFIGTDVGTVLKVVSVPKETWQNM 515
>gi|297681160|ref|XP_002818334.1| PREDICTED: semaphorin-3D [Pongo abelii]
Length = 777
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFSIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|426356754|ref|XP_004045719.1| PREDICTED: semaphorin-3D [Gorilla gorilla gorilla]
Length = 760
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 243 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 303 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 363 DHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 421
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 422 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNMEEVV 476
Query: 273 CES 275
E
Sbjct: 477 LEE 479
>gi|345317940|ref|XP_001520007.2| PREDICTED: semaphorin-4C, partial [Ornithorhynchus anatinus]
Length = 440
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 118/219 (53%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSYDIGKYV----------FFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V +FFF E AVEY + V +RVARVCK D GG L
Sbjct: 209 EPRFVGSAHVPESVGSASGDDDKIYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTL 268
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL C+ P + +FN++Q ++ +PG +T F+GVF + SA+C
Sbjct: 269 QKKWTTFLKARLVCAAP-DRQLHFNQLQALHTLPGPTWPNTTFFGVFHARWGDVDLSAVC 327
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN---------DTETLPDS 192
+ + D++R F G +KE W + VP PRPG C++ + LPD+
Sbjct: 328 QYQLADVQRVFEGPYKEYREQAQKW-SRYTDPVPSPRPGSCIDAWHRRNGYASSLELPDN 386
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNF + HPLM+ V R +P+ ++D FT LV D V
Sbjct: 387 TLNFAKKHPLMEGQVGPRWGRPLLVKKDANFTRLVADRV 425
>gi|426226524|ref|XP_004007391.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4C [Ovis aries]
Length = 711
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKR--DTGGKN 82
+P FVGS +G Y V+FFF E AVEY + V +RVARV +R GG
Sbjct: 208 EPHFVGSAYVPESVGSYTGDDDKVYFFFSERAVEYDCYTEQVVARVARVAQRXGPPGGAX 267
Query: 83 ILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSA 139
L + W +LKARL CS PG + YFN +Q ++ + G +T F+GVF + SA
Sbjct: 268 TLQRKWTAFLKARLACSAPG-WQLYFNRLQALHTLQGASWHNTTFFGVFRARWGDMDLSA 326
Query: 140 ICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLP 190
+C + +E+I++ F G +KE W + VP PRPG C+N+ + LP
Sbjct: 327 VCEYQLEEIQKVFEGPYKEYHEQAQRW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELP 385
Query: 191 DSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
D++LNFI+ HPLM+E V R +P+ +++ THLV D V
Sbjct: 386 DNILNFIKKHPLMEEQVRPRWGRPLLVKKNANLTHLVADRV 426
>gi|134085182|emb|CAM60071.1| sema3ab [Danio rerio]
Length = 765
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
++ FFRE A++ K+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFRENAIDGEQISKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P L +RVP PRPG C T+ PD V+ F RSHP M V +N P+
Sbjct: 364 NYQWVPFL-NRVPYPRPGTCPSKTFDGFESTKDFPDDVITFARSHPAMYNPVFPINNHPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IIKTDVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTVLKVVSI 465
>gi|114614272|ref|XP_527805.2| PREDICTED: semaphorin-3D [Pan troglodytes]
gi|397504401|ref|XP_003822786.1| PREDICTED: semaphorin-3D [Pan paniscus]
Length = 777
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 438
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNMEEVV 493
Query: 273 CES 275
E
Sbjct: 494 LEE 496
>gi|37182992|gb|AAQ89296.1| Collapsin-2 [Homo sapiens]
Length = 777
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 438
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNMEEVV 493
Query: 273 CES 275
E
Sbjct: 494 LEE 496
>gi|41406086|ref|NP_689967.2| semaphorin-3D precursor [Homo sapiens]
gi|8134693|sp|O95025.2|SEM3D_HUMAN RecName: Full=Semaphorin-3D; Flags: Precursor
gi|51094939|gb|EAL24184.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D [Homo sapiens]
Length = 777
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 438
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNMEEVV 493
Query: 273 CES 275
E
Sbjct: 494 LEE 496
>gi|18859355|ref|NP_571136.1| semaphorin-3ab precursor [Danio rerio]
gi|8134733|sp|Q9W686.1|SE3AB_DANRE RecName: Full=Semaphorin-3ab; AltName: Full=Semaphorin-1B; AltName:
Full=Semaphorin-Z1B; Short=Sema Z1B; Flags: Precursor
gi|4704473|gb|AAD28103.1|AF083382_1 semaphorin Z1b [Danio rerio]
Length = 778
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
++ FFRE A++ K+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFRENAIDGEQISKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P L +RVP PRPG C T+ PD V+ F RSHP M V +N P+
Sbjct: 364 NYQWVPFL-NRVPYPRPGTCPSKTFDGFESTKDFPDDVITFARSHPAMYNPVFPINNHPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IIKTDVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTVLKVVSI 465
>gi|109126435|ref|XP_001112607.1| PREDICTED: semaphorin-6B-like [Macaca mulatta]
Length = 351
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 103/176 (58%), Gaps = 11/176 (6%)
Query: 66 VFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVP--GDDT 122
V SRVARVCK D GG +L + W ++LKARLNCS+PG+ FYFN +Q + V G
Sbjct: 76 VVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQAVTSVVSLGGRP 135
Query: 123 KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC 182
VF+T + + GSA+C+F + + F G+F+EQ + S W PV +VP PRPG C
Sbjct: 136 VVLAVFSTPSNSIPGSAVCAFDMTQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCC 195
Query: 183 V------NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDV 230
N + LPD +LNF+++HPLMDEAV + P R + T + VDV
Sbjct: 196 AAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIVRTLMRHQLTRVAVDV 251
>gi|109067640|ref|XP_001107897.1| PREDICTED: semaphorin-3D [Macaca mulatta]
gi|355747881|gb|EHH52378.1| hypothetical protein EGM_12809 [Macaca fascicularis]
Length = 777
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M +++ P F R D T +VVD V E +Y V F T + TV
Sbjct: 422 KRHSVMYKSIYPVAGGPTFKRINVDYRLTQIVVDHVTAE----DGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|402864347|ref|XP_003896432.1| PREDICTED: semaphorin-3D [Papio anubis]
Length = 777
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M +++ P F R D T +VVD V E +Y V F T + TV
Sbjct: 422 KRHSVMYKSIYPVAGGPTFKRINVDYRLTQIVVDHVTAE----DGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|348541195|ref|XP_003458072.1| PREDICTED: semaphorin-3D-like [Oreochromis niloticus]
Length = 1349
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 121/222 (54%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+PDFVGS+ I V+FFF+E AVE K V+SRVARVCK D GG+ L
Sbjct: 773 EPDFVGSFSIPDTRSPDDDKVYFFFKERAVEAGQWDKRVYSRVARVCKNDLGGRRSLINR 832
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKARL CS+PG F+E++DI+ + D + YGVF+TS++ GSA+C
Sbjct: 833 WTTFLKARLVCSVPGPSGVDTQFDELEDIFVLETKDPQNPSIYGVFSTSSSIFRGSAVCV 892
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
FS+ I AF G F + W+ R+P PRPG C ++ T+ PD V+
Sbjct: 893 FSMASIRAAFNGPFAHKEGPDYRWVE-YKGRIPYPRPGTCPSETYDALHKSTKDFPDEVV 951
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD--LLFTHLVVDVVQYE 234
+F+R H LM E V +P+ R + + +VVD V E
Sbjct: 952 SFMRQHQLMWEPVLPLGGRPILTRVNSAYMLKKVVVDRVDAE 993
>gi|410052990|ref|XP_001139016.3| PREDICTED: semaphorin-6B isoform 3 [Pan troglodytes]
Length = 944
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 111/213 (52%), Gaps = 11/213 (5%)
Query: 66 VFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVP--GDDT 122
V SRVARVCK D GG +L + W ++LKARLNCS+PG+ FYFN +Q + V G
Sbjct: 219 VVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHFYFNVLQAVTGVVSLGGRP 278
Query: 123 KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC 182
VF+T + + GSA+C+F + + F G+F+EQ + S W PV +VP PRPG C
Sbjct: 279 VVLAVFSTPSNSIPGSAVCAFDLTQVAAVFEGRFREQKSPESIWTPVPEDQVPRPRPGCC 338
Query: 183 V------NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVF 236
N + LPD +LNF+++HPLMDEAV + P R L H + V
Sbjct: 339 AAPGMQYNASSALPDDILNFVKTHPLMDEAVPSLGHAPWIVR--TLMRHQLTRVAVDVGA 396
Query: 237 GTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
G V F + + VR S TS
Sbjct: 397 GPWGNQTVVFLGSEAGTVLKFLVRPNASTSGTS 429
>gi|47212969|emb|CAF93357.1| unnamed protein product [Tetraodon nigroviridis]
Length = 710
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 128/248 (51%), Gaps = 30/248 (12%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGS+ + + VFFFFRETAVE GKS +SR+ ++C+ D GG+ L
Sbjct: 197 EPKFVGSFWVPESENPDDDKVFFFFRETAVEAQGLGKSTYSRIGQLCRNDMGGQRSLVNK 256
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLM----GSAIC 141
W T+LK RL CS+PG YF+E++D++ + D K V+T +T GSA+C
Sbjct: 257 WTTFLKTRLICSVPGADGSDTYFDELRDVFLLQTRDRKNPLVYTVFSTSSSSVFKGSAVC 316
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVL 194
+S+ DI RAF+G F + W+P +VP PRPG C T+ PD V+
Sbjct: 317 LYSMNDIRRAFLGPFAHKEGPNYQWVP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDDVI 375
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT--- 249
F R HPLM V +P+F R D FT + VD V +Y V F T
Sbjct: 376 QFARHHPLMYNPVYPMTRRPIFVRTNVDYSFTQIAVD----RVGAADGQYDVMFIGTDKG 431
Query: 250 TTLRTVFV 257
T L+ + V
Sbjct: 432 TVLKVINV 439
>gi|345327801|ref|XP_001505929.2| PREDICTED: semaphorin-3D [Ornithorhynchus anatinus]
Length = 775
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ + K+V SRV RVCK D GG L W T
Sbjct: 241 FIGTFPIPDTYNPDDDKIYFFFRESSQDGTTSDKTVLSRVGRVCKNDVGGLRSLINKWTT 300
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDI+ +P D + YGVFTT+++ GSA+C +S+
Sbjct: 301 FLKARLVCSIPGNDGADTHFDELQDIFLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 360
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 361 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 419
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ HP+M ++V P F R D T +VVD V +Y V F T + T+
Sbjct: 420 KRHPVMYKSVYPVSGGPSFTRINVDYRLTQIVVD----HVMAEDGQYDVMFLG-TDIGTI 474
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 475 LKVVSITKEKWNMEEVVLEE 494
>gi|417404886|gb|JAA49176.1| Putative semaphorin [Desmodus rotundus]
Length = 834
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFF E A+EY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFSERALEYDCYMEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKA+L CS P Y N++Q ++ + +T F+ VF + SAIC
Sbjct: 272 QKKWTTFLKAQLVCSAPSRH-LYLNQLQALHTLQDASWHNTTFFAVFRARWGDVDLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ + +I++ F G +KE + W + + +P PRPG C+N+ + LPD+
Sbjct: 331 EYQLGEIQKVFEGPYKEYREQSQKW-GLYTDPIPSPRPGACINNWHRHHGYSSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM+E V R +P+ ++D FTHLV D V
Sbjct: 390 TLNFIKKHPLMEEKVWPRWGRPLLVKKDTNFTHLVADRV 428
>gi|296209808|ref|XP_002751696.1| PREDICTED: semaphorin-3D [Callithrix jacchus]
Length = 777
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTIISRVGRVCKNDAGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + + W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESVDHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M ++V +P R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHSVMYKSVYPVAGRPTLKRINVDYKLTQIVVD----RVIAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|403257165|ref|XP_003921201.1| PREDICTED: semaphorin-3D [Saimiri boliviensis boliviensis]
Length = 777
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E K++ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDAGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + + W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESVDHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
+ H +M ++V +P R D T +VVD V +Y V F T + TV
Sbjct: 422 KRHSVMYKSVYPVAGRPTLKRINVDYKLTQIVVD----RVIAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>gi|188528965|ref|NP_001120908.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B precursor [Xenopus (Silurana)
tropicalis]
gi|183986447|gb|AAI66183.1| sema3b protein [Xenopus (Silurana) tropicalis]
Length = 773
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 117/217 (53%), Gaps = 20/217 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE---F 104
++FFF+ET VE K ++R+ ++C+ D GG+ L W T+LKARL CS+PG
Sbjct: 239 IYFFFKETPVEGAGGVKQSYARIGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGNEIGG 298
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ + D + Y +F+TS++ GSAIC +++ D+ RAF+G F +
Sbjct: 299 DTHFDELRDVFLLQTRDRRNPLIYALFSTSSSVFRGSAICVYTMNDVRRAFLGPFAHKEG 358
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ +VP PRPG C T++ PD VL F R+HPLM V +P
Sbjct: 359 PNYQWV-SYQGKVPYPRPGMCPSKTFGSFESTKSFPDDVLQFARNHPLMFNPVVPGSGRP 417
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
VF R DL FT L VD V EY V F T
Sbjct: 418 VFLRSHGDLSFTQLAVD----RVAAADGEYDVMFIGT 450
>gi|71995633|ref|NP_493582.3| Protein SMP-1, isoform a [Caenorhabditis elegans]
gi|8134675|sp|Q17330.2|SEM1A_CAEEL RecName: Full=Semaphorin-1A; AltName: Full=CeSema; Flags: Precursor
gi|3881120|emb|CAA21714.1| Protein SMP-1, isoform a [Caenorhabditis elegans]
Length = 712
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W +YLK
Sbjct: 222 PNFVATFAYKEHVYFWFREIASEAIDNNEEPQIYARVARVCKNDKGGARPANERWTSYLK 281
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D ++ Y VF+T + + SA+C FS++ I
Sbjct: 282 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNNHVVYTVFSTPDSDVRMSAVCKFSMKKIR 341
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 342 EEFDNGTFKHQNNAQSMWMAFNRNEVPKPRPGSCSPDSTKLPENTVSFILHHPLLHRPI 400
>gi|212286080|ref|NP_001131042.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4C precursor
[Xenopus laevis]
gi|50415520|gb|AAH78116.1| Sema4c protein [Xenopus laevis]
Length = 834
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 115/207 (55%), Gaps = 17/207 (8%)
Query: 36 PDFVGSYDIGK--YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ VGS +IG ++FFF E A+EY + V SRVAR+CK D GG L + W ++LK
Sbjct: 218 PESVGS-EIGDDDKIYFFFTERALEYDCQSEQVVSRVARICKGDLGGARTLQRKWTSFLK 276
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARL CSIP E FN ++ ++K+ + T FY F SAIC +SI+DI++
Sbjct: 277 ARLLCSIP-ELQLNFNLLKSVFKLEAKEWRSTHFYAAFQARWGDSPVSAICQYSIQDIQK 335
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
F G +KE + W S VP PRPG CV + + LPD+ LNF++ HP
Sbjct: 336 VFDGPYKEYREQSQKW-GRYSDSVPSPRPGSCVTNWHRNHGVYSSLELPDNTLNFVKKHP 394
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVV 228
LMD++V +P+ RR FT + V
Sbjct: 395 LMDDSVMSTHMRPLLVRRGANFTTIAV 421
>gi|395514180|ref|XP_003761297.1| PREDICTED: semaphorin-4D-like [Sarcophilus harrisii]
Length = 737
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 26/256 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCK D GG L + W ++LKARL CS+P E F
Sbjct: 227 IYFFFTEVSVEYEFFGKLLIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSLP-EKNFI 285
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + D K FY VF+ + SA+C++++ +E F GK+ + AT
Sbjct: 286 FNVINDVFILKSPDLKEPVFYAVFSPQLNNVGLSAVCAYNMSLVEEVFSKGKYMQSATVE 345
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ S +P+PRPG C+N+ + LPD L F++ HPLMD++V
Sbjct: 346 QSHTKWV-RYSGEIPKPRPGACINNEARAANYSSSLNLPDKTLQFVKDHPLMDDSVFPIT 404
Query: 212 NKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLLQ 263
N+P +RD+ +T +VVD +Q Y+V +++ A ++ + + + +L Q
Sbjct: 405 NRPRLIKRDVNYTQIVVDRIQALDKTVYDVMFISTDTGALHKAVSSENGMHIIEETQLFQ 464
Query: 264 DVSNTSDSICESSVGR 279
D + S G+
Sbjct: 465 DFEPVQTLLLSSKKGK 480
>gi|432885776|ref|XP_004074753.1| PREDICTED: semaphorin-4D-like [Oryzias latipes]
Length = 1050
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
+++FF E +VEY GK + RVARVCK D GG+ L + W ++LKA+L CS+P E F
Sbjct: 229 IYYFFTEVSVEYEFFGKLLIPRVARVCKGDLGGERTLQKKWTSFLKAKLVCSMP-ELNFV 287
Query: 108 FNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QDI+ + G DT FYGVFT+ + SA+C++++ +E F GK+ ++AT
Sbjct: 288 FNVVQDIFTLKGAEWKDTVFYGVFTSQWGNVGLSAVCAYNVSAVEEVFSKGKYMQKATVE 347
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + P PRPG C+N+ + LPD L F+R HPL+++ V
Sbjct: 348 QSHTKWV-RYNGVTPSPRPGACINNLMRRQNINSSLHLPDKTLQFVRDHPLLEDPVLPIG 406
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
NKP +D+ +T +VV+ V+
Sbjct: 407 NKPRLITKDVNYTQIVVERVE 427
>gi|301605936|ref|XP_002932613.1| PREDICTED: semaphorin-4C-like [Xenopus (Silurana) tropicalis]
Length = 772
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 17/207 (8%)
Query: 36 PDFVGSYDIGK--YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ VGS +IG +++FF E A+EY + V SRVAR+CK D GG L + W ++LK
Sbjct: 156 PESVGS-EIGDDDKIYYFFTERALEYDCSSEQVVSRVARICKGDLGGARTLQRKWTSFLK 214
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARL CSIP E FN ++ ++K+ ++ T+F+ F SA+C +SI DI++
Sbjct: 215 ARLLCSIP-ELQLNFNLLKSVFKLEAEEWRSTQFFAAFQARWGDSPVSAVCQYSIHDIQK 273
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
F G +KE + W S VP PRPG C+ + + LPD+ LNF++ HP
Sbjct: 274 VFDGPYKEYREQSQKW-GRYSDSVPSPRPGSCITNWHRNHGVYSSLELPDNTLNFVKKHP 332
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVV 228
LMD+ V +P+ RR + FT + V
Sbjct: 333 LMDDTVMPSQGRPLLVRRGINFTTIAV 359
>gi|6166501|gb|AAF04860.1|AF198084_1 semaphorin 5C [Drosophila melanogaster]
Length = 1081
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 130/216 (60%), Gaps = 19/216 (8%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SRVARVCK D GG +L NW ++LKARL
Sbjct: 225 FVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARL 284
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+P E+P+YF+EIQ + ++ Y F TS + + GSA+C++++ I AF G F
Sbjct: 285 NCSLPVEYPYYFDEIQGMTYAE-SESILYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 343
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+ S +AW V +++ + + G S+ +++ S + LMDEAV +P
Sbjct: 344 KQH--SDAAWKTVNTNQRSQFQCGT---------SSIGHWLESSRYQLMDEAVQPIGAEP 392
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
+++ + F L +D++ + T + V F A++
Sbjct: 393 LYHSKLEQFGRLALDIINTK----TEQVHVLFVASS 424
>gi|301605325|ref|XP_002932285.1| PREDICTED: semaphorin-4B-like [Xenopus (Silurana) tropicalis]
Length = 838
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 36/297 (12%)
Query: 5 RTHRSLYVASDERIKQIALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGK 64
+T SLY D A V A+ ++ + + VG D +++FF ET E+
Sbjct: 209 KTENSLYWLQDP-----AFVGSAYIQESLPKGNPVGDDD---KIYYFFSETGKEFDFFEN 260
Query: 65 SVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV-PGDD-- 121
++ SR+ARVCK D GG+ +L + W ++LKA+L CS PG+ F FN ++D++ + PG++
Sbjct: 261 TIVSRIARVCKGDLGGERVLQRRWTSFLKAQLICSCPGD-GFPFNVLKDMFVLTPGEEHW 319
Query: 122 --TKFYGVFTT--STTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEP 177
T FYGVFT+ + G SA+C+FS+++++ AF G FKE T W +S VPEP
Sbjct: 320 KSTIFYGVFTSQWNKGGAGSSAVCAFSMDEVQNAFNGLFKEVNRETQQWYTYTNS-VPEP 378
Query: 178 RPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVV 228
RPG C +N + +PD VLNF++ H LMD A+ ++P+ + + + + V
Sbjct: 379 RPGACITNSARDKKINSSLQMPDRVLNFVKDHFLMDSAIR---SQPLLLQSQIRYQQISV 435
Query: 229 DVVQ-----YEV--FGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVG 278
V+ Y+V GT + + + + +++L QD+ + + + S G
Sbjct: 436 QRVRGLKKTYDVLFLGTDDGRLHKAVSVNKMVHIIEEIKLFQDMQPVQELLLDPSKG 492
>gi|332866249|ref|XP_527803.3| PREDICTED: semaphorin-3E isoform 2 [Pan troglodytes]
Length = 775
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ +P D K
Sbjct: 266 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>gi|327263471|ref|XP_003216543.1| PREDICTED: semaphorin-4D-like, partial [Anolis carolinensis]
Length = 595
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY GK + R+ARVCK D GG L + W +YLKARL CS+P + +
Sbjct: 93 VYFFFTEVSVEYEFLGKLMIPRIARVCKGDQGGHRTLQKKWTSYLKARLLCSMPDK-NLF 151
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN + D++ + + K YGVFT + SA+C+++I +E F GK+ + T
Sbjct: 152 FNIVNDVFILKTPNLKEPVIYGVFTPQLNNVGLSAVCAYNISTVEDVFTKGKYMQSTTVE 211
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + WL + +P+PRPG C+N T LPD L F++ HPLMD++V
Sbjct: 212 QSHTKWL-RYNGEIPKPRPGACINKEARDEKINTTLNLPDKTLQFVKDHPLMDDSVIPIG 270
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
+KP +RD+ +T +VVD V+
Sbjct: 271 DKPKLVKRDVKYTQIVVDQVR 291
>gi|45382437|ref|NP_990704.1| semaphorin-3D precursor [Gallus gallus]
gi|8134684|sp|Q90663.1|SEM3D_CHICK RecName: Full=Semaphorin-3D; AltName: Full=Collapsin-2;
Short=COLL-2; Flags: Precursor
gi|886809|gb|AAA86896.1| collapsin-2 [Gallus gallus]
Length = 761
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 248 IYFFFREISQDSSTSDKTILSRVGRVCKNDMGGQRSLINKWTTFLKARLVCSIPGPEGAD 307
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ + D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 308 THFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSMADIRAVFNGPYAHKESA 367
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ HPLM ++V P
Sbjct: 368 DHRWVQ-YEGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFIKRHPLMYKSVYPLTGGP 426
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
VF R D T +VVD V E +Y V F T T L+ V +
Sbjct: 427 VFTRINVDYRLTQIVVDHVMAE----DGQYDVIFLGTDIGTVLKAVSI 470
>gi|326911088|ref|XP_003201894.1| PREDICTED: semaphorin-3D-like [Meleagris gallopavo]
Length = 761
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 248 IYFFFREISQDSSTSDKTILSRVGRVCKNDMGGQRSLINKWTTFLKARLVCSIPGPEGAD 307
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ + D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 308 THFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSMADIRAVFNGPYAHKESA 367
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ HPLM ++V P
Sbjct: 368 DHRWVQ-YEGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFIKRHPLMYKSVYPLTGGP 426
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
VF R D T +VVD V E +Y V F T T L+ V +
Sbjct: 427 VFTRINVDYRLTQIVVDHVMAE----DGQYDVIFLGTDIGTVLKAVSI 470
>gi|332866251|ref|XP_003318607.1| PREDICTED: semaphorin-3E isoform 1 [Pan troglodytes]
Length = 715
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 146 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ +P D K
Sbjct: 206 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLPTRDHKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 385 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 421
>gi|363743888|ref|XP_418232.3| PREDICTED: semaphorin-4E-like [Gallus gallus]
Length = 763
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 116/200 (58%), Gaps = 18/200 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++ FF ETAVE+ K + SR+AR+CK D GGK +L + W ++LKARL+CSIP E F+
Sbjct: 171 IYVFFTETAVEFEFYDKILVSRIARICKGDLGGKRLLQRRWTSFLKARLSCSIP-ELNFH 229
Query: 108 FNEIQDIY---KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN IQD++ + D+ FYG+F+ L SA+C++S+ I+ AF G ++ T
Sbjct: 230 FNIIQDVFFLRRGKWQDSIFYGIFSQQWGRLDISAVCAYSMASIQEAFSKGSYRGPVTVE 289
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S W+ V VP PRPG C+ N + LPD VL F R HPLMD +V
Sbjct: 290 HSHVRWM-VFRGEVPVPRPGACIDNFARNMGYNTSSDLPDKVLQFARDHPLMDSSVNPIG 348
Query: 212 NKPVFYRRDLLFTHLVVDVV 231
++P +R +T +VVD V
Sbjct: 349 DRPALLKRSSNYTRIVVDRV 368
>gi|426356744|ref|XP_004045715.1| PREDICTED: semaphorin-3E, partial [Gorilla gorilla gorilla]
Length = 800
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 245 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 304
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 305 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 364
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 365 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 423
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 424 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 483
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 484 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 520
>gi|6912650|ref|NP_036563.1| semaphorin-3E isoform 1 precursor [Homo sapiens]
gi|8134690|sp|O15041.1|SEM3E_HUMAN RecName: Full=Semaphorin-3E; Flags: Precursor
gi|51094941|gb|EAL24186.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|119597389|gb|EAW76983.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|156230170|gb|AAI52459.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|168267302|dbj|BAG09707.1| semaphorin-3E precursor [synthetic construct]
Length = 775
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 266 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>gi|397504408|ref|XP_003822788.1| PREDICTED: semaphorin-3E [Pan paniscus]
Length = 775
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 266 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>gi|40788215|dbj|BAA20789.2| KIAA0331 [Homo sapiens]
Length = 814
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 245 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 304
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 305 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 364
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 365 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 423
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 424 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 483
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 484 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 520
>gi|327290330|ref|XP_003229876.1| PREDICTED: semaphorin-4F-like, partial [Anolis carolinensis]
Length = 723
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 108/200 (54%), Gaps = 20/200 (10%)
Query: 36 PDFVGSYDI--GK-----YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNW 88
P+FV S + GK ++FFF ETA EY K +RVARVCK D GG+ L + W
Sbjct: 174 PEFVASAFVREGKDGEDDKIYFFFTETAREYDFYEKVKVARVARVCKGDLGGQKTLQKRW 233
Query: 89 ATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDD-----TKFYGVFTTSTTGLMGSAICSF 143
T+LKA+L CS P + FN ++D+ +P D T FYGVF GSA+C++
Sbjct: 234 TTFLKAQLYCSDP-KSGTVFNILRDVVTLPALDGAWNATIFYGVFAAQGREESGSAVCTY 292
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTE-------TLPDSVLNF 196
S+E + RA G FKE W + S VP PRPG CV + LPD VL F
Sbjct: 293 SMEAVRRAMEGHFKEFRRECDKWTRLTPSDVPHPRPGACVTSSTEGIGSSLALPDRVLTF 352
Query: 197 IRSHPLMDEAVAHRDNKPVF 216
+R HPLMDE V DN PV
Sbjct: 353 VRDHPLMDELVLPLDNAPVL 372
>gi|219518233|gb|AAI44339.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
gi|223461601|gb|AAI40707.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Homo sapiens]
Length = 775
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 131/263 (49%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G AIC
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFNTTSNIFRGHAICV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W V +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F RSHPLM +A+ KP+ + D + + VD V+ E +Y V F T
Sbjct: 403 RFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGTDNG 458
Query: 253 RTVFVKVRLLQDVSNTSDSICES 275
+ V Q++ + + I E
Sbjct: 459 IVLKVITIYNQEMESMEEVILEE 481
>gi|344276695|ref|XP_003410143.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B-like [Loxodonta
africana]
Length = 748
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 19/218 (8%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRELAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ +P D Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLPSRDRWSPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V ++P+
Sbjct: 362 MHQWM-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYSSVLPIGSRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
F + FT +V D V +Y V F T T
Sbjct: 421 FLQVGAGYTFTQIVAD----RVAAADGQYDVLFIGTDT 454
>gi|194386258|dbj|BAG59693.1| unnamed protein product [Homo sapiens]
Length = 766
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 131/263 (49%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G AIC
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFNTTSNIFRGHAICV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W V +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F RSHPLM +A+ KP+ + D + + VD V+ E +Y V F T
Sbjct: 403 QFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGTDNG 458
Query: 253 RTVFVKVRLLQDVSNTSDSICES 275
+ V Q++ + + I E
Sbjct: 459 IVLKVITIYNQEMESMEEVILEE 481
>gi|41472949|gb|AAS07488.1| unknown [Homo sapiens]
Length = 591
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 22 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 81
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 82 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 141
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 142 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 200
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 201 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 260
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 261 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 297
>gi|344242165|gb|EGV98268.1| Semaphorin-4D [Cricetulus griseus]
Length = 833
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 27/256 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 203 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 261
Query: 108 FNEIQDIY--KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT--- 161
FN +QD++ + PG + FY VFT + SA+C++S+ +E F GK+ + AT
Sbjct: 262 FNILQDVFVLRAPGLEAVFYAVFTPQLNNVGLSAVCAYSLATVEAVFSRGKYMQSATVEQ 321
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTET----------LPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ DTE LPD L F++ HPLMD++V D
Sbjct: 322 SHTKWV-RYNGPVPTPRPGACI-DTEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 379
Query: 212 NKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLLQ 263
N+P ++D+ +T +VVD Q Y+V +++ A + V V + +L Q
Sbjct: 380 NRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILGKEVHVVEETQLFQ 439
Query: 264 DVSNTSDSICESSVGR 279
D + S G+
Sbjct: 440 DSEPVQTLLLSSKKGK 455
>gi|296011008|ref|NP_001171600.1| semaphorin-3E isoform 2 [Homo sapiens]
gi|194384160|dbj|BAG64853.1| unnamed protein product [Homo sapiens]
Length = 715
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 146 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 206 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 385 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 421
>gi|354482818|ref|XP_003503593.1| PREDICTED: semaphorin-4D [Cricetulus griseus]
Length = 861
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 27/256 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 289
Query: 108 FNEIQDIY--KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT--- 161
FN +QD++ + PG + FY VFT + SA+C++S+ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLEAVFYAVFTPQLNNVGLSAVCAYSLATVEAVFSRGKYMQSATVEQ 349
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTET----------LPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ DTE LPD L F++ HPLMD++V D
Sbjct: 350 SHTKWV-RYNGPVPTPRPGACI-DTEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 407
Query: 212 NKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLLQ 263
N+P ++D+ +T +VVD Q Y+V +++ A + V V + +L Q
Sbjct: 408 NRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILGKEVHVVEETQLFQ 467
Query: 264 DVSNTSDSICESSVGR 279
D + S G+
Sbjct: 468 DSEPVQTLLLSSKKGK 483
>gi|449513850|ref|XP_002190148.2| PREDICTED: semaphorin-4D [Taeniopygia guttata]
Length = 977
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG IL + W ++LKARL C+IP +
Sbjct: 349 IYFFFTEVSVEYEFVGKLLIPRIARVCKRDQGGLRILQKKWTSFLKARLICTIPDKN-LI 407
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQATST 163
FN I D++ + K YGVFT + SA+C++S+ +E F GK+ + AT
Sbjct: 408 FNVINDVFILKSPTLKEPVIYGVFTPQLNDVGISAVCAYSLSAVEEVFSKGKYMQSATVE 467
Query: 164 S---AWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 468 QFHIKWVQ-YNGEIPNPRPGACINNEARASNYMSSLNLPDKTLQFVKDHPLMDDSVTPMG 526
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
++P +RD+ +T +VVD V+
Sbjct: 527 DRPRLVKRDVKYTQIVVDRVR 547
>gi|410899200|ref|XP_003963085.1| PREDICTED: semaphorin-3ab-like [Takifugu rubripes]
Length = 773
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 128/242 (52%), Gaps = 21/242 (8%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+ FF E A E GK ++SRVARVCK D GG+ L W+T+ KARL CS+PG
Sbjct: 238 VYVFFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARLECSVPGPDGL 297
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+++QDI+ + G D K YG+FTTS+ L GSA+C + +ED+ RAF G F +
Sbjct: 298 HTHFDQLQDIFILHGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRAFKGNFLHKEG 357
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W + +VP PRPG C + T PD V+ F R+HPL+ E+V +P
Sbjct: 358 PQYKWAE-FTGKVPYPRPGTCPSTTYGSYSSTREYPDDVIFFSRTHPLLQESVLPLGERP 416
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R + F+ LVVD V+ S Y V F T + V + L +D + +
Sbjct: 417 LLVRVGVHYKFSKLVVDRVE----AVDSTYDVLFIGTDS-GLVLKAIHLPKDHGQSQEIT 471
Query: 273 CE 274
E
Sbjct: 472 LE 473
>gi|432089128|gb|ELK23208.1| Semaphorin-4C [Myotis davidii]
Length = 834
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSYDIGK----------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS + + V+FFF E A+EY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSLTGDDDKVYFFFSERALEYNCYMEQVVARVARVCKGDVGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKA L CS P Y + +Q ++ + G +T F+ VF + SA+C
Sbjct: 272 QKKWTTFLKAHLVCSAPSRH-LYLSHLQALHTLQGTSWHNTTFFAVFRARWGDVDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEQSQKW-GRYTDPVPSPRPGSCINNWHRHHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPL++E V +P+ ++D FTHLV D V + Y V F AT
Sbjct: 390 TLNFIKKHPLLEEQVRPLWGRPLLVKKDTNFTHLVADRVTGL---DGASYTVLFIAT 443
>gi|449273916|gb|EMC83259.1| Semaphorin-3D, partial [Columba livia]
Length = 772
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 127/245 (51%), Gaps = 30/245 (12%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE + + K++ SRV RVCK D GG+ L W T
Sbjct: 242 FIGTFPIPDTYNPDDDKIYFFFREISQDSGTSDKTILSRVGRVCKNDMGGQRSLINKWTT 301
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDI+ + D + YGVFTT+++ GSA+C +S+
Sbjct: 302 FLKARLVCSIPGPEGADTHFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSM 361
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + + W+ R+P PRPG C + T PD V++FI
Sbjct: 362 ADIRAVFNGPYAHKESVDHRWVQ-YEGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFI 420
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTL 252
+ HPLM ++V PVF R D T +VVD V +Y V F T T L
Sbjct: 421 KRHPLMYKSVYPVTGGPVFTRINVDYRLTQIVVD----HVMAEDGQYDVIFLGTDIGTVL 476
Query: 253 RTVFV 257
+ V +
Sbjct: 477 KVVSI 481
>gi|326934523|ref|XP_003213338.1| PREDICTED: semaphorin-4E-like [Meleagris gallopavo]
Length = 656
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 114/200 (57%), Gaps = 18/200 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++ FF ETAVE+ K + SR+AR+CK D GGK +L + W ++LKARL+CS+P E F+
Sbjct: 171 IYVFFTETAVEFEFYDKILVSRIARICKGDLGGKRLLQRRWTSFLKARLSCSVP-ELNFH 229
Query: 108 FNEIQDIY---KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN IQDI+ + D+ FYG+F+ L SA+C++S+ I AF G ++ T
Sbjct: 230 FNIIQDIFFLRRRKWQDSIFYGIFSQQWGRLDTSAVCAYSMASIREAFSKGSYRGPITVE 289
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S W+ V VP PRPG C+ N + LPD VL F R HPLMD +V
Sbjct: 290 HSHVRWM-VFRGEVPVPRPGACIDNFARNLGYNTSSDLPDKVLQFARDHPLMDGSVNPIG 348
Query: 212 NKPVFYRRDLLFTHLVVDVV 231
+P +R +T +VVD V
Sbjct: 349 ERPALLKRSSNYTRIVVDRV 368
>gi|449480861|ref|XP_002187112.2| PREDICTED: semaphorin-3D [Taeniopygia guttata]
Length = 758
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 128/245 (52%), Gaps = 30/245 (12%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE + + K++ SRV RVCK D GG+ L W T
Sbjct: 228 FIGTFPIPDTYNPDDDKIYFFFREISQDSGTSDKTILSRVGRVCKNDMGGQRSLINKWTT 287
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDI+ + D + YGVFTT+++ GSA+C +S+
Sbjct: 288 FLKARLVCSIPGPEGADTHFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSM 347
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
+I F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 348 AEIRAVFNGPYAHKESADHRWVQ-YEGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFI 406
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTL 252
R HPLM + V PVF R D T +VVD V E +Y V F T T L
Sbjct: 407 RRHPLMYKPVYPVTGAPVFTRINVDYRLTQVVVDHVMAE----DGQYDVIFLGTDVGTVL 462
Query: 253 RTVFV 257
+ V +
Sbjct: 463 KVVSI 467
>gi|345785604|ref|XP_533551.3| PREDICTED: semaphorin-4D [Canis lupus familiaris]
Length = 854
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 118/211 (55%), Gaps = 20/211 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
PD V S D V+FFF E +VEY K + RVARVCK D GG L + W ++LKA
Sbjct: 218 HPDGVDSGD--DRVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKA 275
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERA 151
RL CS P + FN +QDI+ + D K FYGVFT + SA+C++++ E
Sbjct: 276 RLICSRP-DNNLVFNVLQDIFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAV 334
Query: 152 FV-GKFKEQAT---STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIR 198
F GK+ + AT S + W+ + VP PRPG C+N + TLPD L FI+
Sbjct: 335 FSGGKYMQSATVEQSHTKWV-RYNGAVPTPRPGACINREARAANFSSSLTLPDKTLQFIK 393
Query: 199 SHPLMDEAVAHRDNKPVFYRRDLLFTHLVVD 229
HPLMD +V DN+P +RD+ +T +VVD
Sbjct: 394 DHPLMDGSVTPIDNRPRLIKRDVNYTQIVVD 424
>gi|403291340|ref|XP_003936754.1| PREDICTED: semaphorin-3B [Saimiri boliviensis boliviensis]
Length = 676
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ + SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPAMGRLLVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V++F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIHFARNHPLMYNSVLPIGGQPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|561676|gb|AAA51021.1| CeSema [Caenorhabditis elegans]
Length = 562
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 9/181 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKS----VFSRVARVCKRDTGGKNILSQNWATY 91
P+FV ++ ++V+F+FRE A E I+ +S +++RVARVCK D GG ++ W +Y
Sbjct: 223 PNFVATFAYKEHVYFWFREIASEAIDNNRSRSFQIYARVARVCKNDKGGARPANERWTSY 282
Query: 92 LKARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIED 147
LKARLN S+P G PFYFNE++ D ++ Y VF+T + + SA+C FS++
Sbjct: 283 LKARLNYSLPSGSSPFYFNELKAVSDPRHAGNNNHVVYTVFSTPDSDVRMSAVCKFSMKK 342
Query: 148 IERAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
I F G FK+Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+
Sbjct: 343 IREEFDNGTFKQQNNAQSMWMAFNRNEVPKPRPGSCSPDSTKLPENTVSFILHHPLLHRP 402
Query: 207 V 207
+
Sbjct: 403 I 403
>gi|8134700|sp|Q90665.1|SEM4D_CHICK RecName: Full=Semaphorin-4D; AltName: Full=Collapsin-4;
Short=COLL-4
gi|886813|gb|AAA86898.1| collapsin-4, partial [Gallus gallus]
Length = 295
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 4 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 62
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 63 FNIINDVFTLKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 122
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ + LPD L F++ HPLMD++V
Sbjct: 123 QSHTKWV-RYNGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 181
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
++P +RD+ +T +VVD V+
Sbjct: 182 DRPRLVKRDVKYTQIVVDRVR 202
>gi|444513574|gb|ELV10420.1| Semaphorin-3B [Tupaia chinensis]
Length = 742
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRRAPLLYTVFSTSSGIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F RSHPLM +V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARSHPLMYNSVLPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + F+ +V D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFSQIVAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|432852686|ref|XP_004067334.1| PREDICTED: semaphorin-4B-like [Oryzias latipes]
Length = 844
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 25/218 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS+P + F
Sbjct: 257 IYFFFSEAGKEFDFFDNTIVSRIARVCKGDKGGERVLQKKWTTFLKAQLLCSLPDDG-FP 315
Query: 108 FNEIQDIY--KVPGD---DTKFYGVFTTS-TTGLMG-SAICSFSIEDIERAFVGKFKEQA 160
FN IQD++ K GD T FYGVFT+ G G SA+C+FS+ +ERAF G+++E
Sbjct: 316 FNIIQDMFVLKPVGDSWESTVFYGVFTSQWYKGASGSSAVCAFSMAQVERAFSGRYREVN 375
Query: 161 TSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
T W + +VPEPRPG CV + + +PD VLNF++ H LMD +
Sbjct: 376 RETQQWY-TYNHQVPEPRPGACVTNHARQLGIRSSLDMPDKVLNFVKDHFLMDSVIR--- 431
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ P+ +R++ +T + V +Q G Y V F T
Sbjct: 432 SSPLLLKRNVHYTQIAVHKIQ----GMERAYDVLFIGT 465
>gi|4759092|ref|NP_004627.1| semaphorin-3B isoform 1 precursor [Homo sapiens]
gi|8134673|sp|Q13214.1|SEM3B_HUMAN RecName: Full=Semaphorin-3B; AltName: Full=Sema A(V); AltName:
Full=Semaphorin-V; Short=Sema V; Flags: Precursor
gi|974284|gb|AAD09138.1| semaphorin V [Homo sapiens]
Length = 749
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|351694416|gb|EHA97334.1| Semaphorin-3D [Heterocephalus glaber]
Length = 783
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 129/251 (51%), Gaps = 36/251 (14%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVC------KRDTGGKNIL 84
F+G++ I ++FFFRE++ E K++ SRV RV + D GG+ L
Sbjct: 240 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDKAILSRVGRVWAMKMVEQNDVGGQRSL 299
Query: 85 SQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSA 139
W T+LKARL CSIPG +F+E+QDIY +P D + YGVFTTS++ GSA
Sbjct: 300 INKWTTFLKARLVCSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTSSSVFRGSA 359
Query: 140 ICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPD 191
+C +S+ D+ AF G + + ++ W+ R+P PRPG C + T PD
Sbjct: 360 VCVYSMADVRAAFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSRTYDPLIKSTRDFPD 418
Query: 192 SVLNFIRSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
V++FIR HPLM +AV P F R D T +VVD V +Y V F T
Sbjct: 419 DVVSFIRRHPLMYKAVYPAAGAPSFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLGT 474
Query: 250 ---TTLRTVFV 257
T L+ V +
Sbjct: 475 DIGTVLKVVSI 485
>gi|297288983|ref|XP_002803437.1| PREDICTED: semaphorin-3E-like [Macaca mulatta]
Length = 735
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 166 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 225
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG +F+E++D++ +P D K
Sbjct: 226 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDHKNPVI 285
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 286 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 344
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 345 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 404
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 405 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 441
>gi|395856553|ref|XP_003800692.1| PREDICTED: semaphorin-3B [Otolemur garnettii]
Length = 769
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 153/313 (48%), Gaps = 37/313 (11%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCL--------QPDFVGSYDIGK------ 46
++++R R L + + RY + L +P FV + I +
Sbjct: 178 LDLARAKRGLKLVTGAGSNAALGATACARYKDYLTPCFLLRPEPKFVKVFWIPESENPDD 237
Query: 47 -YVFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-E 103
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 238 DKIYFFFRESAVEAAPALGRQFVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGIE 297
Query: 104 FPFYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
+F+++QD++ + D Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 298 GDTHFDQLQDVFLLSSRDRLTPLLYAVFSTSSGIFQGSAVCMYSMNDVRRAFLGPFAHKE 357
Query: 161 TSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
T W+ RVP PRPG C + T+ PD V+ F R+HPLM AV +
Sbjct: 358 GPTHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNAVLPIGGR 416
Query: 214 PVFYR--RDLLFTHLVVDVV-----QYEVF--GTTSEYIVYFAATTTLRTVFVKVRLLQD 264
P+F + FT + D V Y+V GT S ++ + + V+ LL++
Sbjct: 417 PLFLQVGAGYTFTQIAADRVAAADGHYDVLFIGTDSGTVLKVISVPKSSSPSVEGLLLEE 476
Query: 265 VSNTSDSICESSV 277
+ DS +S+
Sbjct: 477 LQMFEDSAAVTSM 489
>gi|449271076|gb|EMC81669.1| Semaphorin-4D [Columba livia]
Length = 860
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 227 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDKN-LI 285
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 286 FNIINDVFILKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSTVEEVFSKGKYMQSATVE 345
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 346 QSHTKWV-RYNGEIPNPRPGACINNEARASNYMSSLNLPDKTLQFVKDHPLMDDSVTPMG 404
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
++P +RD+ +T +VVD V+
Sbjct: 405 DRPRLVKRDVKYTQIVVDRVR 425
>gi|332206512|ref|XP_003252337.1| PREDICTED: semaphorin-3E isoform 1 [Nomascus leucogenys]
Length = 775
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FV SY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVASYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 266 VGRLCGNDVGGQRILVNKWSTFLKARLICSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDEAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>gi|355560866|gb|EHH17552.1| hypothetical protein EGK_13979 [Macaca mulatta]
gi|355747882|gb|EHH52379.1| hypothetical protein EGM_12810 [Macaca fascicularis]
gi|380787549|gb|AFE65650.1| semaphorin-3E isoform 1 precursor [Macaca mulatta]
Length = 775
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG +F+E++D++ +P D K
Sbjct: 266 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>gi|2880035|gb|AAC02731.1| semaphorin V [Homo sapiens]
gi|119585469|gb|EAW65065.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_d [Homo sapiens]
Length = 750
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 243 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 303 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 363 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 421
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 422 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 464
>gi|395516347|ref|XP_003762351.1| PREDICTED: semaphorin-3B [Sarcophilus harrisii]
Length = 1015
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 125/241 (51%), Gaps = 22/241 (9%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP---GE 103
++FFFRE AVE G+ SR+ ++C+ D GG+ L W T+LKARL CS+P G
Sbjct: 487 IYFFFREVAVEGNPGLGRVSVSRIGQICRNDIGGQRSLVNKWTTFLKARLVCSVPGVDGA 546
Query: 104 FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
F+E++D++ +P D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 547 SDTVFDELRDVFLLPTKDRRSPLLYAVFSTSSSVFQGSAVCVYSMNDVRRAFLGPFAHKE 606
Query: 161 TSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
W+ RVP PRPG C T+ PD V+ F R+HPLM + +
Sbjct: 607 GPNYQWV-SYQGRVPYPRPGMCPSKTFGTFGSTKDFPDDVIQFARNHPLMYNPILPVGGR 665
Query: 214 PVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
P+F R D F +V D V T Y V F T + TV + + +D +++
Sbjct: 666 PIFLRTGTDYTFMQIVAD----RVAATDGHYDVLFIG-TDIGTVLKVISVPKDSWQSTEG 720
Query: 272 I 272
+
Sbjct: 721 L 721
>gi|119585468|gb|EAW65064.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_c [Homo sapiens]
gi|119585470|gb|EAW65066.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_c [Homo sapiens]
Length = 636
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 248
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 249 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 307
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 308 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 350
>gi|121583784|ref|NP_001073411.1| semaphorin-3B precursor [Rattus norvegicus]
gi|120537404|gb|AAI29104.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Rattus norvegicus]
Length = 749
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPAMGRMTVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPFLYAVFSTSSGIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|363744564|ref|XP_424426.3| PREDICTED: semaphorin-4D [Gallus gallus]
Length = 975
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 21/218 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 347 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDKN-LI 405
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 406 FNIINDVFILKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 465
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 466 QSHTKWV-RYNGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 524
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P +RD+ +T +VVD V+ + GT Y V F +T
Sbjct: 525 DRPRLVKRDVKYTQIVVDRVR-ALNGTI--YDVMFIST 559
>gi|334333745|ref|XP_001378534.2| PREDICTED: semaphorin-3B [Monodelphis domestica]
Length = 764
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 126/241 (52%), Gaps = 22/241 (9%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP---GE 103
++FFFRE AVE G++ SR+ ++C+ D GG+ L W T+LKARL CS+P G
Sbjct: 237 IYFFFREVAVEGNPGLGRASVSRIGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVDGA 296
Query: 104 FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
F+E++D++ +P D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 297 SDSVFDELRDVFLLPTKDRRSPLLYAVFSTSSNVFQGSAVCVYSMNDVRRAFLGPFAHKE 356
Query: 161 TSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
W+ RVP PRPG C T+ PD V+ F R+HPLM + +
Sbjct: 357 GPNYQWV-SYQGRVPYPRPGMCPSKTFGTFGSTKDFPDDVIQFARNHPLMYNPILPVGGR 415
Query: 214 PVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
P+F + D FT +V D V T Y V F T + TV + + +D +++
Sbjct: 416 PIFLQTGIDYSFTQIVAD----RVAATDGHYDVLFIG-TDIGTVLKVISVPKDSWQSTEG 470
Query: 272 I 272
+
Sbjct: 471 L 471
>gi|402864355|ref|XP_003896436.1| PREDICTED: semaphorin-3E-like, partial [Papio anubis]
Length = 623
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 54 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 113
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG +F+E++D++ +P D K
Sbjct: 114 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDHKNPVI 173
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 174 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 232
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 233 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 292
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 293 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 329
>gi|332206514|ref|XP_003252338.1| PREDICTED: semaphorin-3E isoform 2 [Nomascus leucogenys]
Length = 715
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FV SY I V+FFF E A+E N ++++R
Sbjct: 146 MGRLAHIRTEHDDERLLKEPKFVASYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 206 VGRLCGNDVGGQRILVNKWSTFLKARLICSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYGTTKDYPDEAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 385 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 421
>gi|207667286|gb|ACI25100.1| semaphorin 4g, partial [Danio rerio]
Length = 283
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 14/197 (7%)
Query: 48 VFFFFRETAVEYIN-CGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E + E S +RVARVCKRD GG L + W ++LKARL CS+P ++ F
Sbjct: 86 IYFFFTEKSQELSPYFSHSRVARVARVCKRDRGGLLTLQKKWTSFLKARLVCSLP-DYEF 144
Query: 107 YFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
+FN ++ ++ + G D+ FYG+F + SAIC +S+ DI+ AF G + E +
Sbjct: 145 HFNVLRSVFFLEGSSSQDSTFYGIFGLEWKNVKASAICQYSVSDIQWAFDGPYMESKEDS 204
Query: 164 SAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRDNKP 214
++ + +VPEPRPG C+ D LPD VL+F+R HPLM + + +P
Sbjct: 205 NSKWTQYTGKVPEPRPGSCITDQHRAKGINSSINLPDDVLHFVRRHPLMYRQILPQGQRP 264
Query: 215 VFYRRDLLFTHLVVDVV 231
+ +RR++ +T + V V
Sbjct: 265 LLFRRNVDYTKIAVHTV 281
>gi|348528172|ref|XP_003451592.1| PREDICTED: semaphorin-4D-like [Oreochromis niloticus]
Length = 1036
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK RVARVCK D GG+ L + W ++LKA+L CS+P E F
Sbjct: 229 IYFFFTEVSVEYEFFGKLFIPRVARVCKGDLGGQRTLQKKWTSFLKAKLVCSMP-ELNFV 287
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN + D++ + G D K YGVFT+ + SA+C++ I+D+E F GK+ ++AT
Sbjct: 288 FNVVHDVFILKGTDRKDTVIYGVFTSQWGNVGLSAVCAYEIKDVEDVFSKGKYMQKATVE 347
Query: 162 -STSAWLPVLSSRVPEPRPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + P PRPG C +N++ LPD L F++ HPL+++ +
Sbjct: 348 QSHTKWV-RYNGITPTPRPGACINNQMRLQNINNSLHLPDKTLQFVKDHPLLEDPILPIH 406
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P +D+ +T +VV+ VQ
Sbjct: 407 NRPRLITKDVNYTQIVVERVQ 427
>gi|292620076|ref|XP_001921423.2| PREDICTED: semaphorin-4G [Danio rerio]
Length = 880
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 113/197 (57%), Gaps = 14/197 (7%)
Query: 48 VFFFFRETAVEYIN-CGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E + E S +RVARVCKRD GG L + W ++LKARL CS+P ++ F
Sbjct: 259 IYFFFTEKSQELSPYFSHSRVARVARVCKRDRGGLLTLQKKWTSFLKARLVCSLP-DYEF 317
Query: 107 YFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
+FN ++ ++ + G D+ FYG+F + SAIC +S+ DI+ AF G + E +
Sbjct: 318 HFNVLRSVFFLEGSSSQDSAFYGIFGLEWKNVKASAICQYSVSDIQWAFDGPYMESKEDS 377
Query: 164 SAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRDNKP 214
++ + +VPEPRPG C+ D LPD VL+F+R HPLM + + +P
Sbjct: 378 NSKWTQYTGKVPEPRPGSCITDQHRAKGINSSINLPDDVLHFVRRHPLMYRQILPQGQRP 437
Query: 215 VFYRRDLLFTHLVVDVV 231
+ +RR++ +T + V V
Sbjct: 438 LLFRRNVDYTKIAVHTV 454
>gi|148689263|gb|EDL21210.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_b [Mus musculus]
Length = 736
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 229 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 288
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 289 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 348
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 349 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 407
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 408 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 450
>gi|334332689|ref|XP_001375624.2| PREDICTED: hypothetical protein LOC100024325 [Monodelphis
domestica]
Length = 1636
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GKS+ R+ARVCK D GG L + W ++LKARL CS+ E
Sbjct: 230 IYFFFTEVSVEYEFFGKSMIPRIARVCKGDQGGLRTLQKKWTSFLKARLACSL-LENNSL 288
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + D K FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 289 FNVINDVFILRAPDLKEPVFYAVFTPQWNNVGLSAVCAYNMSLVEDVFSKGKYMQSATVE 348
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ S VP+PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 349 QSHTKWV-RYSGEVPKPRPGACINNEAKAANYSSSLNLPDKTLQFVKDHPLMDDSVVPIS 407
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P +RD+ +T +VVD +Q
Sbjct: 408 NRPRLIKRDVNYTQIVVDRIQ 428
>gi|355746689|gb|EHH51303.1| hypothetical protein EGM_10651 [Macaca fascicularis]
Length = 749
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIATD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|402860035|ref|XP_003894441.1| PREDICTED: semaphorin-3B isoform 1 [Papio anubis]
Length = 749
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIATD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|187956411|gb|AAI50759.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Mus musculus]
Length = 749
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|341942016|sp|Q62177.2|SEM3B_MOUSE RecName: Full=Semaphorin-3B; AltName: Full=Semaphorin-A; Short=Sema
A; Flags: Precursor
Length = 748
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 241 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 300
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 301 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 361 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 462
>gi|148689260|gb|EDL21207.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689261|gb|EDL21208.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689262|gb|EDL21209.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689264|gb|EDL21211.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
gi|148689265|gb|EDL21212.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_a [Mus musculus]
Length = 749
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|426340617|ref|XP_004034225.1| PREDICTED: semaphorin-3B isoform 1 [Gorilla gorilla gorilla]
Length = 749
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVETAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|332216030|ref|XP_003257145.1| PREDICTED: semaphorin-3B [Nomascus leucogenys]
Length = 635
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 248 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V T Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIAAD----RVAATDGHYDVLFIGTDAGTVLKVISV 349
>gi|112421073|ref|NP_033179.2| semaphorin-3B precursor [Mus musculus]
gi|112421094|ref|NP_001036244.1| semaphorin-3B precursor [Mus musculus]
Length = 749
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|348500236|ref|XP_003437679.1| PREDICTED: semaphorin-4B-like [Oreochromis niloticus]
Length = 817
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 124/218 (56%), Gaps = 25/218 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS+P + F
Sbjct: 231 IYFFFSEAGKEFDFFDNTIVSRIARVCKGDKGGERVLQKKWTTFLKAQLLCSLPDD-GFP 289
Query: 108 FNEIQDIY--KVPGD---DTKFYGVFTTS-TTGLMG-SAICSFSIEDIERAFVGKFKEQA 160
FN IQD++ K GD T FYGVFT+ G G SA+C+F++E +++AF G+++E
Sbjct: 290 FNIIQDMFVLKPTGDSWESTVFYGVFTSQWYKGASGSSAVCAFTMEQVKKAFSGRYREVN 349
Query: 161 TSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
T W + VPEPRPG CV + + +PD VLNF++ H LMD A+
Sbjct: 350 RETQQWY-TYNHPVPEPRPGACVTNHARQMGIQSSLHMPDKVLNFVKDHFLMDSAIR--- 405
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ P+ +R + +T + V +Q G Y V F T
Sbjct: 406 STPLLLKRSVRYTQIAVHKIQ----GMERAYDVLFIGT 439
>gi|410951235|ref|XP_003982304.1| PREDICTED: semaphorin-3B [Felis catus]
Length = 748
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEY-INCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE + G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEASPSLGRQTVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+ +QD++ + D Y VF+TS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDHLQDMFLLSLRDRWSPLLYAVFSTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + D FT + D V Y V F T T L+ + V
Sbjct: 421 FIQVDAGYTFTQITAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|410037129|ref|XP_001149891.3| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3B [Pan troglodytes]
Length = 684
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 177 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 236
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 237 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 296
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 297 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPIGGRPL 355
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 356 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 398
>gi|397496062|ref|XP_003818862.1| PREDICTED: semaphorin-3B isoform 1 [Pan paniscus]
gi|410291182|gb|JAA24191.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Pan troglodytes]
Length = 749
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPIGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|291386475|ref|XP_002709664.1| PREDICTED: semaphorin W [Oryctolagus cuniculus]
Length = 755
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 12/210 (5%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D + ++FFF ET+ + + RVARVC D GG+ L Q W T+LK
Sbjct: 218 LSPAEWGDEDGDEEIYFFFTETSRAFDSYEPIKVPRVARVCAGDLGGRKTLQQRWTTFLK 277
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G P ++ + PG T FYG+F++ G SA+C+F +DI +
Sbjct: 278 ADLLCPRPEHGRAPSVLQDMAVLRPEPGTGTPIFYGIFSSQWEGAAISAVCAFQPQDIRK 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
F G F+E + LPVL + VP+PRPG+C+ + + +LPD VL FIR HP
Sbjct: 338 VFSGPFRELKHDCNRGLPVLDNDVPQPRPGECITNNMKLQQFSSSLSLPDRVLTFIRDHP 397
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LMD+ V+ D+ P+ D + +V V
Sbjct: 398 LMDKPVSPADSHPLLVTTDTAYLRVVAHRV 427
>gi|393906674|gb|EFO16578.2| hypothetical protein LOAG_11927 [Loa loa]
Length = 491
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 118/205 (57%), Gaps = 11/205 (5%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGK-SVFSRVARVCKRDTGGKNILSQNWATYLKA 94
P ++ + + +YV+ + RE AVE+ +C +++SR+AR+C+ D GG S W +++KA
Sbjct: 2 PLYIYTRNAKRYVYIWLREQAVEHESCNDGAIYSRIARLCRSDHGGPRPYSNEWTSFVKA 61
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKF-------YGVFTTSTTGLMGSAICSFSIED 147
RLNCSIPG +PFYF++I+ I P + Y VF + G+ SAIC+F I+
Sbjct: 62 RLNCSIPGHYPFYFDQIEAIAP-PVNSLHLSEMKQLVYAVFRSPLAGISSSAICAFDIQQ 120
Query: 148 IERAFV-GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
I F K+ ++ S W+ + S + RPG+C N++ LP+ + F R++PLM+EA
Sbjct: 121 INDVFSESKYGDRNNLQSLWMNAVYSGTSKYRPGKCTNNSRLLPEKAVAFARANPLMNEA 180
Query: 207 VAHRDNKPVFYRRDL-LFTHLVVDV 230
+ + P+ L FT +V+D
Sbjct: 181 IPNYFGAPIAIHTGLDHFTQIVIDA 205
>gi|354485787|ref|XP_003505063.1| PREDICTED: semaphorin-3E [Cricetulus griseus]
gi|344244058|gb|EGW00162.1| Semaphorin-3E [Cricetulus griseus]
Length = 777
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 126/247 (51%), Gaps = 29/247 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 226 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDVGGQRILVNK 285
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G AIC
Sbjct: 286 WSTFLKARLVCSVPGVNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAICV 345
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 346 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 404
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F R+HPLM + + KP+ + D + L VD V+ E +Y V F T
Sbjct: 405 RFARTHPLMYQPIKPAHKKPILVKTDGKYNLKQLAVDRVEAE----DGQYDVLFIGTD-- 458
Query: 253 RTVFVKV 259
R + +KV
Sbjct: 459 RGIMLKV 465
>gi|363738578|ref|XP_423897.3| PREDICTED: semaphorin-3B [Gallus gallus]
Length = 526
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 23/226 (10%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRETAVE GK+ SR+ ++C+ D GG+ L W T+LKARL C++PG
Sbjct: 223 IYFFFRETAVERQQGLGKASVSRIGQICRNDVGGQRSLVNKWTTFLKARLVCAVPGTDGA 282
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ + D + Y F+TS++ GSA+C +++ DI RAF+G F +
Sbjct: 283 DTHFDELRDVFLLQTRDKRNPLVYAAFSTSSSIFQGSAVCVYTMADIRRAFLGPFAHKEG 342
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P +RVP PRPG C + T+ PD V+ F R HPLM V +P
Sbjct: 343 PNYQWVP-YQARVPYPRPGMCPSRTFGTFSSTKDFPDEVIQFARHHPLMYNPVLPHGQRP 401
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTV 255
+F + + FT + VD V Y V F T T L+ V
Sbjct: 402 LFLQAGVPHTFTRIAVD----RVAAADGHYDVLFIGTDVGTVLKVV 443
>gi|344305875|ref|XP_003421615.1| PREDICTED: semaphorin-4D [Loxodonta africana]
Length = 861
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 115/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 229 VYFFFMEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSNLV 287
Query: 108 FNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + G + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 288 FNMLQDVFVLRGPWLKEPVFYAVFTPQLNNVGLSAVCAYNLSAVEEVFSHGKYMQSATVE 347
Query: 162 -STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N + LPD L F++ HPLMD++V D
Sbjct: 348 QSHTKWV-RYNGVVPRPRPGACINSEARAANFTSSLNLPDKTLQFVKDHPLMDDSVTPTD 406
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P ++D+ +T +VVD VQ
Sbjct: 407 NRPRLIKKDVNYTQIVVDRVQ 427
>gi|348506226|ref|XP_003440661.1| PREDICTED: semaphorin-4B-like [Oreochromis niloticus]
Length = 818
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 130/230 (56%), Gaps = 34/230 (14%)
Query: 32 NCLQ-PDFVGSYDIGK------------YVFFFFRETAVEYINCGKSVFSRVARVCKRDT 78
N LQ P FVGS I + ++FFF E E+ ++ SR+ARVCK D
Sbjct: 202 NWLQDPAFVGSAYIQESLPKGNPVGDDDKIYFFFSEAGKEFDFFDNTIVSRIARVCKGDV 261
Query: 79 GGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGD--DTKFYGVFTTS-T 132
GG+ +L + W T+LKA+L CS+P + F FN IQD++ + P D +T FYGVFT+
Sbjct: 262 GGERVLQKKWTTFLKAQLLCSLPDDG-FPFNIIQDMFVLTPSPEDWKNTVFYGVFTSQWY 320
Query: 133 TGLMG-SAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTE---- 187
G G SA+CSF+++ +E+AF G+++E T W + VPEPRPG C+ +
Sbjct: 321 KGASGSSAVCSFTMDQVEKAFNGRYREVNRETQQWY-TYNHPVPEPRPGACITNAARKQG 379
Query: 188 -----TLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+PD VLNF++ H LMD + ++P+ +R++ +T + V VQ
Sbjct: 380 ISSSLLMPDKVLNFVKDHFLMDSVIR---SQPLLLKRNVRYTQIAVHRVQ 426
>gi|449274941|gb|EMC83968.1| Semaphorin-3B, partial [Columba livia]
Length = 528
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 20/217 (9%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRETAVE GK+ F+R+ ++C+ D GG+ L W T+LKARL C++PG+
Sbjct: 206 IYFFFRETAVERQQGLGKTSFARIGQICRNDVGGQRSLVNKWTTFLKARLVCAVPGQDGA 265
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ + D + Y VF+TS++ GSA+C +++ DI RAF+G F +
Sbjct: 266 DTHFDELRDVFLLQTRDKRNPLVYAVFSTSSSVFQGSAVCVYTMADIRRAFLGPFAHKEG 325
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ RVP PRPG C + T+ PD V+ F R HPLM V +P
Sbjct: 326 PNYQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDEVIQFARHHPLMYNPVLPHGQRP 384
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+F + + FT + VD V Y V F T
Sbjct: 385 LFLQAAVPYTFTRIAVD----RVTAADGHYDVLFIGT 417
>gi|363737850|ref|XP_413950.3| PREDICTED: semaphorin-4B [Gallus gallus]
Length = 825
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 123/218 (56%), Gaps = 25/218 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF ET E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS P E F
Sbjct: 244 VYFFFSETGKEFDYFENTIVSRIARVCKGDQGGERVLQRRWTTFLKAQLLCSHP-EDGFP 302
Query: 108 FNEIQDIYKV-PGD----DTKFYGVFTT--STTGLMGSAICSFSIEDIERAFVGKFKEQA 160
FN +QD++ + PG+ +T FYGVFT+ + GL SA+C+F + +++AF G +KE
Sbjct: 303 FNVLQDVFVLTPGEQRWRETLFYGVFTSQWNKGGLGSSAVCAFPMHSVQKAFGGLYKEVN 362
Query: 161 TSTSAWLPVLSSRVPEPRPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAHRD 211
T W +S VPEPRPG C +N + +PD VLNF++ H LMD V
Sbjct: 363 RETQQWY-TDTSPVPEPRPGTCITSHTRHLKINSSLQMPDRVLNFVKDHFLMDSPV---R 418
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ + L + + V VQ G Y V F T
Sbjct: 419 SQPLLLQSRLRYQQIGVHRVQ----GLRGTYDVLFLGT 452
>gi|354476481|ref|XP_003500453.1| PREDICTED: semaphorin-3B [Cricetulus griseus]
gi|344252807|gb|EGW08911.1| Semaphorin-3B [Cricetulus griseus]
Length = 749
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPATGRMTVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSAIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 AHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|301764711|ref|XP_002917777.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3E-like, partial
[Ailuropoda melanoleuca]
Length = 812
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 137/281 (48%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E + ++++R
Sbjct: 243 MGRLAHIRSEHDDERLLKEPKFVGSYMIPDNEDQDDNKVYFFFTEKALEAESGAHAIYAR 302
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 303 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGTNGIDTYFDELEDIFLLHTTDHKNPVI 362
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + RVP PRPG C +
Sbjct: 363 FGLFNTTSNIFRGHAICVYHMSSIREAFNGPYAHKEGPEYHW-SLYEGRVPYPRPGSCAS 421
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + L VD V+ E
Sbjct: 422 KVNGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGRYNLKQLAVDRVEAE 481
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 482 ----DGQYDVLFIGTDNGIVLKVITIYNQEIESMEEVILEE 518
>gi|239985412|ref|NP_001121824.1| semaphorin 4B precursor [Danio rerio]
Length = 830
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 127/230 (55%), Gaps = 34/230 (14%)
Query: 32 NCLQ-PDFVGSYDIGK------------YVFFFFRETAVEYINCGKSVFSRVARVCKRDT 78
N LQ P FVGS I + ++FFF E E+ ++ SR+ARVCK D
Sbjct: 222 NWLQDPAFVGSAYIQESLPKGNAVGDDDKIYFFFSEAGKEFDFFDNTIVSRIARVCKGDK 281
Query: 79 GGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIY-----KVPGDDTKFYGVFTTS-T 132
GG+ +L + W T+LKA+L CS+P + F FN IQD++ K T FYGVFT+
Sbjct: 282 GGERVLQKKWTTFLKAQLLCSLPDDG-FPFNIIQDMFVLTPSKEDWKKTMFYGVFTSQWY 340
Query: 133 TGLMG-SAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--- 188
G G SA+C+F+++ +E AF G+++E T W + VPEPRPG C+ +T
Sbjct: 341 KGASGSSAVCAFTMDQVEEAFNGRYREVNRETQQWY-TYNHPVPEPRPGACITNTARAQG 399
Query: 189 ------LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+PD VLNF++ H LMD + ++P+ +R++ +T L V VQ
Sbjct: 400 ISSSLHMPDRVLNFVKDHFLMDNVIR---SQPLLLKRNVRYTQLAVHRVQ 446
>gi|431892312|gb|ELK02752.1| Semaphorin-4A [Pteropus alecto]
Length = 759
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + + V+FFF ETA E+ K SRVARVCK D GG+ +L + W T+
Sbjct: 224 LQPDASFVAAIPSTQVVYFFFEETASEFEFFDKLRTSRVARVCKNDVGGERLLQRKWTTF 283
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P + D Y VFT+ G SA+C+FS++
Sbjct: 284 LKAQLLCTEPGQLP--FNVIRHAVLLPANFSSDQHVYAVFTSQWQIGGTRSSAVCAFSLK 341
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE---PRPGQCVNDTETLPDSVLNFIRSHPLM 203
DIERAF GK+KE TS W + VP+ PRPG C + D L F+++H LM
Sbjct: 342 DIERAFEGKYKELNKETSRW---TTHGVPDDISPRPGSCSVGPSS--DKALTFMKAHFLM 396
Query: 204 DEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
DE V P+ + + +T L V+ Q S ++Y TT
Sbjct: 397 DEQVV---GTPLLVKSGVEYTRLAVEAAQD--LDGHSHLVMYLGTTT 438
>gi|111598847|gb|AAH90669.1| Sema3b protein [Mus musculus]
Length = 749
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ R+F+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRSFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|281338505|gb|EFB14089.1| hypothetical protein PANDA_006138 [Ailuropoda melanoleuca]
Length = 737
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 137/281 (48%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E + ++++R
Sbjct: 168 MGRLAHIRSEHDDERLLKEPKFVGSYMIPDNEDQDDNKVYFFFTEKALEAESGAHAIYAR 227
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 228 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGTNGIDTYFDELEDIFLLHTTDHKNPVI 287
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + RVP PRPG C +
Sbjct: 288 FGLFNTTSNIFRGHAICVYHMSSIREAFNGPYAHKEGPEYHW-SLYEGRVPYPRPGSCAS 346
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + L VD V+ E
Sbjct: 347 KVNGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGRYNLKQLAVDRVEAE 406
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 407 ----DGQYDVLFIGTDNGIVLKVITIYNQEIESMEEVILEE 443
>gi|449471897|ref|XP_004175082.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4B [Taeniopygia guttata]
Length = 791
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 122/222 (54%), Gaps = 25/222 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF ET E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS P E F
Sbjct: 234 VYFFFSETGKEFDYFENTIVSRIARVCKGDQGGERVLQRRWTTFLKAQLLCSHP-EDGFP 292
Query: 108 FNEIQDIYKV-PGD----DTKFYGVFTT--STTGLMGSAICSFSIEDIERAFVGKFKEQA 160
FN +QDI+ + PG+ +T FYGVFT+ + GL SA+C+F + ++RAF G +KE
Sbjct: 293 FNVLQDIFVLTPGELRWRETLFYGVFTSQWNKGGLGSSAVCAFPMRSVQRAFGGLYKEVN 352
Query: 161 TSTSAWLPVLSSRVPEPRPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAHRD 211
T W +S VPEPRPG C +N + +PD VLNFI+ H LMD V
Sbjct: 353 RETQQWY-TDTSPVPEPRPGMCITSHTRHLKINSSLQMPDRVLNFIKDHFLMDSPVR--- 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
++P+ + + + V Q G Y V F T R
Sbjct: 409 SQPLLLQSHRRYQQIGVHRAQ----GLHGTYDVLFLGTDDGR 446
>gi|348581943|ref|XP_003476736.1| PREDICTED: semaphorin-3B-like [Cavia porcellus]
Length = 751
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 124/239 (51%), Gaps = 20/239 (8%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFF E AVE G+ SRV ++C+ D GG+ L W T+LKARL CSIPG E
Sbjct: 244 IYFFFHELAVEAAPVLGRLTVSRVGQICRNDMGGQRSLVNKWTTFLKARLVCSIPGVEGD 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 304 THFDQLQDVFLLSSRDPRNPLLYTVFSTSSGIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +PV
Sbjct: 364 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPIGGRPV 422
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F + FT + VD V Y V F T + TV + L + +S+ +
Sbjct: 423 FMQVSAGYTFTQIAVD----RVAAADGHYDVLFIG-TDVGTVLKVISLPKGSQPSSEGL 476
>gi|224066009|ref|XP_002192378.1| PREDICTED: semaphorin-3B-like [Taeniopygia guttata]
Length = 616
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 121/228 (53%), Gaps = 23/228 (10%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRETAVE GK+ F+R+ ++C+ D GG+ L W T+LKARL C++PG
Sbjct: 307 IYFFFRETAVERQQGLGKTSFARIGQICRNDMGGQRSLVNKWTTFLKARLVCAVPGPDGA 366
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ + D + Y +F+TS++ GSA+C +++ DI RAF+G F +
Sbjct: 367 DTHFDELRDVFLLQTRDKRNPLIYAIFSTSSSVFQGSAVCVYTMADIRRAFLGPFAHKEG 426
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ RVP PRPG C T+ PD V+ F R HPLM V +P
Sbjct: 427 PNYQWV-SYQGRVPYPRPGMCPSKTFGTFGSTKDFPDEVIQFARHHPLMYNPVLPHGQRP 485
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+F + + FT + VD V Y V F T T L+ V V
Sbjct: 486 LFLQAAVPYTFTRIAVD----RVTAADGHYDVLFIGTDVGTVLKVVSV 529
>gi|139948846|ref|NP_001077334.1| semaphorin-4E isoform 2 precursor [Danio rerio]
gi|134054522|emb|CAM73255.1| sema4e [Danio rerio]
Length = 766
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 112/198 (56%), Gaps = 23/198 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFPF 106
++ FF ETAVEY +C K SRVARVCK D GG+ L + W ++LKARL+C +P P
Sbjct: 235 IYLFFSETAVEYESCTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVPNTNLPL 294
Query: 107 YFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQ--- 159
+QD++ + DD FY VFT + SA+CS+ IEDI+ F GKFK
Sbjct: 295 L---VQDVFHLCPDDWTTCVFYAVFTPQSDSSQYSAVCSYKIEDIKTVFSKGKFKAPFNV 351
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHR 210
TS W+ + S +P+PRPG C+++ + LPD L F++ PLMD+AV
Sbjct: 352 ETSFVKWV-MYSGELPDPRPGACIDNHARQKGITKSLELPDKTLQFVKDKPLMDQAVTAE 410
Query: 211 DNKPVFYRRDLLFTHLVV 228
+P+ +R FT +VV
Sbjct: 411 --QPLLVKRGAAFTRIVV 426
>gi|354481552|ref|XP_003502965.1| PREDICTED: semaphorin-4A [Cricetulus griseus]
gi|344250961|gb|EGW07065.1| Semaphorin-4A [Cricetulus griseus]
Length = 761
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + + V+FFF ETA E+ SRVARVCK D GG+ +L + W T+
Sbjct: 227 LHPDASFVAAIPSAQVVYFFFEETASEFDFFEALYTSRVARVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D ++ Y VFT+ G SA+C+FS+
Sbjct: 287 LKAQLLCTEPGQLP--FNVIRHAVLLPSDSPSASRVYAVFTSQWQVGGTRSSAVCAFSLT 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DIER F GKFKE TS W + R PE PRPG C + D L F++ H LMD
Sbjct: 345 DIERVFKGKFKELNKETSRW---TTYRGPEANPRPGSCSTGPSS--DKALTFMKDHFLMD 399
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
E V R P+ + + +T L V+ Q S ++V + T+T
Sbjct: 400 EHVVGR---PLLVKSGVEYTQLAVEHAQGL---DGSRHVVMYLGTST 440
>gi|291393721|ref|XP_002713257.1| PREDICTED: semaphorin 3B [Oryctolagus cuniculus]
Length = 752
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRELAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + + + Y F+TS+ GSA+C +S++D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRERRTPLLYAAFSTSSGVFQGSAVCVYSMDDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 THQWV-SYQGRVPYPRPGMCPSKTFGTFGSTKDFPDDVIQFARNHPLMYNSVLPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
F R FT + D V Y V F T
Sbjct: 421 FLRVGAGYTFTQIAAD----RVAAADGHYDVLFIGT 452
>gi|432863302|ref|XP_004070070.1| PREDICTED: semaphorin-4B-like [Oryzias latipes]
Length = 834
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 131/231 (56%), Gaps = 24/231 (10%)
Query: 18 IKQIALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRD 77
++ A V A+ ++ + + VG D ++FFF E E+ ++ SR+ARVCK D
Sbjct: 220 LQDPAFVGSAYIQESLPKGNLVGDDD---KIYFFFSEAGKEFDFFDNTIVSRIARVCKGD 276
Query: 78 TGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIY---KVPGD--DTKFYGVFTTS- 131
GG+ +L + W T+LKA+L CS+P + F FN IQD++ P D +T FYGVFT+
Sbjct: 277 IGGERVLQKKWTTFLKAQLLCSLPDD-GFPFNIIQDMFVLTSTPEDWKNTVFYGVFTSQW 335
Query: 132 TTGLMG-SAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET-- 188
G G SA+CSF+++ +E AF G+++E T W + VPEPRPG C+ +
Sbjct: 336 YKGASGSSAVCSFTMDQVEAAFNGRYREVNRETQQWY-TYNHPVPEPRPGACITNESREQ 394
Query: 189 -------LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+PD VLNF++ H LMD + ++P+ +R++ +T + V VQ
Sbjct: 395 GISSSLHVPDKVLNFVKDHFLMDSMIR---SQPLLLKRNVRYTQIAVHQVQ 442
>gi|431839066|gb|ELK00994.1| Semaphorin-3E [Pteropus alecto]
Length = 775
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 129/255 (50%), Gaps = 28/255 (10%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDQDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 266 VGRLCLNDVGGQRILVNKWSTFLKARLVCSVPGLNGIDTYFDELEDIFLLHTRDRKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F+RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFVRSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAAT 249
+Y V F T
Sbjct: 445 ----DGQYDVLFIGT 455
>gi|410952172|ref|XP_003982757.1| PREDICTED: semaphorin-3E [Felis catus]
Length = 715
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 136/281 (48%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 146 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 206 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDPKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYGTTKDYPDEAIRFARSHPLMYQPIKPAHKKPILVKTDGRYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q+ + + I E
Sbjct: 385 ----DGQYDVLFIGTDNGIVLKVITIYNQETESMEEVILEE 421
>gi|296209819|ref|XP_002751698.1| PREDICTED: semaphorin-3E [Callithrix jacchus]
Length = 774
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 129/263 (49%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E + ++++RV R+C D GG+ IL
Sbjct: 224 EPRFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCVNDIGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++DI+ +P D K +G+F T++ G AIC
Sbjct: 284 WSTFLKARLVCSVPGTNRIDTYFDELEDIFLLPTRDHKNPVIFGLFNTTSNVFRGHAICV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I F G + + W V +VP PRPG C + T PD +
Sbjct: 344 YHMSSIRAVFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASTVNGGGYRTTRDYPDDTI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F R+HPLM +A+ KP+ + D + + VD V+ E +Y V F T
Sbjct: 403 RFARNHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGTDNG 458
Query: 253 RTVFVKVRLLQDVSNTSDSICES 275
+ V Q++ + + I E
Sbjct: 459 IVLKVITIYNQEMESMEEVILEE 481
>gi|345782828|ref|XP_540506.3| PREDICTED: semaphorin-3E, partial [Canis lupus familiaris]
Length = 776
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 128/255 (50%), Gaps = 28/255 (10%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 237 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTR 296
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 297 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDHKNPVI 356
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + RVP PRPG C +
Sbjct: 357 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGRVPYPRPGSCAS 415
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 416 KVNGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGRYNLKQIAVDRVEAE 475
Query: 235 VFGTTSEYIVYFAAT 249
+Y V F T
Sbjct: 476 ----DGQYDVLFIGT 486
>gi|37359896|dbj|BAC97926.1| mKIAA0331 protein [Mus musculus]
Length = 574
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 23 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 82
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G A+C
Sbjct: 83 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 142
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 143 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 201
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 202 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 256
>gi|74210786|dbj|BAE25038.1| unnamed protein product [Mus musculus]
Length = 775
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
>gi|47217872|emb|CAG02365.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 120/218 (55%), Gaps = 25/218 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E E+ ++ SR+ARVCK D GG+ +L + W T+LKA+L CS+P + F
Sbjct: 98 IYFFFSEVGKEFDFFDNTIVSRIARVCKGDKGGERVLQKKWTTFLKAQLLCSLPDDG-FP 156
Query: 108 FNEIQDIY--KVPGD---DTKFYGVFTTS-TTGLMG-SAICSFSIEDIERAFVGKFKEQA 160
FN IQD++ K GD T FYGVFT+ G G SA+C+F++ +ERAF +++E
Sbjct: 157 FNIIQDMFVLKPTGDSWESTVFYGVFTSQWYRGASGSSAVCAFTMAQVERAFSSRYREVN 216
Query: 161 TSTSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
T W + VPEPRPG CV D +PD VLNF++ H LMD +
Sbjct: 217 RETQQWY-TYNHPVPEPRPGACVTDQARRMGIHSSLQMPDKVLNFVKDHFLMDSVIR--- 272
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ P+ +R + +T + V +Q G Y V F T
Sbjct: 273 SSPLLLKRSVRYTQIAVHKIQ----GMERAYDVLFIGT 306
>gi|149044998|gb|EDL98084.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149044999|gb|EDL98085.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 695
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 64 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 122
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 123 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLSTVEAVFSRGKYMQSATVE 182
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE----------TLPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 183 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 240
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 241 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFLSTDRGALHKAVILAKEVHVVEETQLF 300
Query: 263 QDVSNTSDSICESSVGR 279
QD + S GR
Sbjct: 301 QDFEPVLSLLLSSKKGR 317
>gi|281604106|ref|NP_001164034.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D precursor
[Rattus norvegicus]
Length = 862
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLSTVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTET----------LPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 350 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 407
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 408 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFLSTDRGALHKAVILAKEVHVVEETQLF 467
Query: 263 QDVSNTSDSICESSVGR 279
QD + S GR
Sbjct: 468 QDFEPVLSLLLSSKKGR 484
>gi|113199777|ref|NP_035478.2| semaphorin-3E precursor [Mus musculus]
gi|341942126|sp|P70275.3|SEM3E_MOUSE RecName: Full=Semaphorin-3E; AltName: Full=Semaphorin-H; Short=Sema
H; Flags: Precursor
gi|4104334|gb|AAD01996.1| semaphorin M-SemaK [Mus musculus]
gi|37046741|gb|AAH57956.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Mus musculus]
gi|74192779|dbj|BAE34903.1| unnamed protein product [Mus musculus]
gi|148706763|gb|EDL38710.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E [Mus musculus]
Length = 775
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
>gi|410903548|ref|XP_003965255.1| PREDICTED: semaphorin-4D-like [Takifugu rubripes]
Length = 985
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 136/244 (55%), Gaps = 26/244 (10%)
Query: 45 GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF 104
G +++FF E +VEY K + RVARVCK D GG+ L + W ++LKA+L CS+ E
Sbjct: 203 GDKIYYFFTEVSVEYEFFSKLLIPRVARVCKGDLGGQRTLQKKWTSFLKAKLVCSM-SEL 261
Query: 105 PFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQA 160
F FN + DI+ + G+ DT YGVFT+ + SA+C+++I +E+ F GK+ ++A
Sbjct: 262 NFVFNVVHDIFILKGETWRDTVIYGVFTSQWGNVGLSAVCAYNIAAVEKVFSKGKYMQKA 321
Query: 161 T---STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVA 208
T S + W+ + P PRPG C+N+ + LPD L F++ HPL+++ V
Sbjct: 322 TVEQSHTKWI-RHNGATPSPRPGACINNQMRQQNISSSLHLPDKTLQFVKDHPLLEDPVL 380
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVR 260
N P +D+ +T +VVD VQ Y+V T ++ V + + V + +++
Sbjct: 381 PIGNGPRLIAKDVNYTQIVVDRVQALDQKIYDVIFTGTDKGVLHKSVVFEKEVHIMEEIQ 440
Query: 261 LLQD 264
LL++
Sbjct: 441 LLKN 444
>gi|335295561|ref|XP_003130268.2| PREDICTED: semaphorin-3E [Sus scrofa]
Length = 715
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 136/281 (48%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N +++SR
Sbjct: 146 LGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYSR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K
Sbjct: 206 VGRICVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDHKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMAGIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q+ + + I E
Sbjct: 385 ----DGQYDVLFIGTDNGIVLKVITIYNQETESMEEVILEE 421
>gi|194224945|ref|XP_001493931.2| PREDICTED: semaphorin-4D-like [Equus caballus]
Length = 937
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P E
Sbjct: 306 VYFFFTEVSVEYEFIFKLMIPRVARVCKGDLGGLRTLQKKWTSFLKARLICSRP-ESNLI 364
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QDI+ + D K FYGVFT + SA+C++++ E F GK+ + AT
Sbjct: 365 FNVLQDIFVLRSPDLKEPVFYGVFTPQLNNMGLSAVCAYNLSTAEAVFSRGKYMQSATVE 424
Query: 162 -STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N + LPD L F++ HPLMD++V D
Sbjct: 425 QSHTKWV-SYNGAVPTPRPGACINREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPID 483
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P D+ +T +VVD Q
Sbjct: 484 NRPKLVISDVNYTQIVVDRTQ 504
>gi|351711910|gb|EHB14829.1| Semaphorin-3B [Heterocephalus glaber]
Length = 751
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFF E AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFHELAVEAAPVLGRLTVSRVGQICRNDMGGQRSLVNKWTTFLKARLVCSMPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 SHFDQLQDVFLLSSRDPRNPLLYTVFSTSSSIFQGSAVCMYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM + +PV
Sbjct: 362 TYQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPILPIGGRPV 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + VD V Y V F T T L+ + V
Sbjct: 421 FMQVSAGYTFTQIAVD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|326927795|ref|XP_003210074.1| PREDICTED: semaphorin-3B-like [Meleagris gallopavo]
Length = 556
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 120/226 (53%), Gaps = 23/226 (10%)
Query: 48 VFFFFRETAVE-YINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRE AVE GK+ SR+ ++C+ D GG+ L W T+LKARL C++PG
Sbjct: 231 IYFFFREMAVERQQGLGKASISRIGQICRNDVGGQRSLVNKWTTFLKARLVCAVPGTDGA 290
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ + D + Y F+TS++ GSA+C +++ DI RAF+G F +
Sbjct: 291 DTHFDELRDVFLLQTRDKRNPLVYAAFSTSSSIFQGSAVCIYTMADIRRAFLGPFAHKEG 350
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P +RVP PRPG C + T+ PD V+ F R HPLM V +P
Sbjct: 351 PNYQWVP-YQARVPYPRPGMCPSRTFGTFSSTKDFPDEVIQFARHHPLMYNPVLPHGQRP 409
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTV 255
+F + + FT + VD V Y V F T T L+ V
Sbjct: 410 LFLQAGVPHTFTRIAVD----RVAAADGHYDVLFIGTDVGTVLKVV 451
>gi|54607089|ref|NP_001005914.1| semaphorin-3B isoform 2 precursor [Homo sapiens]
gi|15559241|gb|AAH13975.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Homo sapiens]
gi|18999360|gb|AAH24220.1| Sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [Homo sapiens]
gi|190690475|gb|ACE87012.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B protein [synthetic construct]
gi|190691851|gb|ACE87700.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B protein [synthetic construct]
Length = 748
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 361 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 462
>gi|194041210|ref|XP_001927890.1| PREDICTED: semaphorin-3B [Sus scrofa]
Length = 747
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 119/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEATPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGTEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
FN++QD++ + D Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 TNFNQLQDVFLLSSRDRWTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 LHQWV-SYQGRVPYPRPGMCPSKTFGTFTSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|148706747|gb|EDL38694.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3D, isoform CRA_a [Mus musculus]
Length = 772
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 33/260 (12%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVC G+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVC-----GQRSLINKWTT 297
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 298 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 357
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 358 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 416
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 417 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 471
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 472 LKVVSISKEKWNMEEVVLEE 491
>gi|345786926|ref|XP_541878.3| PREDICTED: semaphorin-3B [Canis lupus familiaris]
Length = 719
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VFTTS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSLRDRWSPLLYTVFTTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|211970871|dbj|BAG82816.1| semaphorin-3A protein [Melopsittacus undulatus]
Length = 236
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 22/212 (10%)
Query: 61 NCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVP 118
+ GK+ +R+ ++CK D GG L W T+LKARL CS+PG +F+E+QD++ +
Sbjct: 4 HTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMN 63
Query: 119 GDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVP 175
D K YGVFTTS+ GSA+C +S+ D+ R F+G + + W+P RVP
Sbjct: 64 SKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGPNYQWVP-YQGRVP 122
Query: 176 EPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHL 226
PRPG C + T+ LPD V+ F RSHP M V +N+P+ + D+ FT +
Sbjct: 123 YPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPIMIKTDVDYQFTQI 182
Query: 227 VVDVVQYEVFGTTSEYIVYFAAT---TTLRTV 255
VVD V E +Y V F T T L+ V
Sbjct: 183 VVDRVDAE----DGQYDVMFIGTDVGTVLKVV 210
>gi|403257156|ref|XP_003921198.1| PREDICTED: semaphorin-3E isoform 1 [Saimiri boliviensis
boliviensis]
Length = 774
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E + ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCVNDIGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G AIC
Sbjct: 284 WSTFLKARLVCSVPGTNRIDTYFDELEDVFLLPTRDHKNPVIFGLFNTTSNVFRGHAICV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I F G + + W V +VP PRPG C + T PD +
Sbjct: 344 YHMSSIRAVFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASTVNGGGYRTTRDYPDDTI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F R+HPLM +A+ KP+ + D + + VD V+ E +Y V F T
Sbjct: 403 RFARNHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGTDNG 458
Query: 253 RTVFVKVRLLQDVSNTSDSICES 275
+ V Q++ + + I E
Sbjct: 459 IVLKVITIYNQEMESMEEVILEE 481
>gi|854324|emb|CAA59982.1| semaphorin A [Mus musculus]
Length = 748
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 119/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 241 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 300
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G +
Sbjct: 301 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPLPHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 361 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFGRNHPLMYNPVLPMGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 462
>gi|339254230|ref|XP_003372338.1| mucolipin-1 [Trichinella spiralis]
gi|316967269|gb|EFV51717.1| mucolipin-1 [Trichinella spiralis]
Length = 680
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 19 KQIALVMCAHRYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKR 76
K+ L + +R+D + +P FV S+ I YV+F+FRE E CGK+V++RV RVC
Sbjct: 110 KEEDLGLRTNRHDKKILNEPSFVASFKIEDYVYFWFREATYEQRGCGKAVYARVGRVCSH 169
Query: 77 DTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYK-VPG-----DDTKFYGVFTT 130
D G W +++KA LNCS PGEFP YF+E+ + +PG D+ Y VF +
Sbjct: 170 DHGHAR-RKDTWTSFVKAPLNCSAPGEFPHYFDELVATSESIPGSNSLSDNRLLYAVFNS 228
Query: 131 STTGLMGSAICSFSIEDIERAF-VGKFKEQATSTSAWLPVLSSRV---PEPRPGQCVNDT 186
++ + SAIC+FS+ D+++ F +FK Q LP S V +PG CVND+
Sbjct: 229 PSSIIPSSAICAFSMHDVKQVFEKSEFKVQHNIGMRHLPRYPSAVLASATVKPGFCVNDS 288
Query: 187 ETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIV 244
L D ++NF+ ++PL+++A+ + P+F FT + VD + G EY V
Sbjct: 289 RLLSDDIVNFVNNNPLLNDAIPNAFESPLFVHLGYSGSFTQIAVDAKVRGLDG--QEYDV 346
Query: 245 YFAAT 249
F T
Sbjct: 347 VFVGT 351
>gi|403257158|ref|XP_003921199.1| PREDICTED: semaphorin-3E isoform 2 [Saimiri boliviensis
boliviensis]
Length = 714
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 27/263 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E + ++++RV R+C D GG+ IL
Sbjct: 164 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEDNAHTIYARVGRLCVNDIGGQRILVNK 223
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G AIC
Sbjct: 224 WSTFLKARLVCSVPGTNRIDTYFDELEDVFLLPTRDHKNPVIFGLFNTTSNVFRGHAICV 283
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I F G + + W V +VP PRPG C + T PD +
Sbjct: 284 YHMSSIRAVFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASTVNGGGYRTTRDYPDDTI 342
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTTL 252
F R+HPLM +A+ KP+ + D + + VD V+ E +Y V F T
Sbjct: 343 RFARNHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGTDNG 398
Query: 253 RTVFVKVRLLQDVSNTSDSICES 275
+ V Q++ + + I E
Sbjct: 399 IVLKVITIYNQEMESMEEVILEE 421
>gi|14318630|gb|AAH09113.1| SEMA3B protein [Homo sapiens]
gi|119585471|gb|EAW65067.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B, isoform CRA_e [Homo sapiens]
gi|325464415|gb|ADZ15978.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3B [synthetic construct]
Length = 635
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 248 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 349
>gi|194210682|ref|XP_001915766.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-4A [Equus caballus]
Length = 726
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 22/228 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + + V+FFF ETA E+ K SRVARVCK D GG+ +L + W T+
Sbjct: 227 LQPDASFVAAIPSTQVVYFFFEETASEFEFFEKLHTSRVARVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P + +++ Y VFT+ G SA+C+FS+E
Sbjct: 287 LKAQLLCAQPGQLP--FNVIRHAVLLPANSSTESRVYAVFTSQWQIGGTRSSAVCAFSLE 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
+I+R F GK+KE TS W + VP+ PRPG C + D L F++ H LMD
Sbjct: 345 NIKRVFEGKYKELNKETSRW---TTYGVPDISPRPGSCSVGPSS--DKALTFMKDHFLMD 399
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTL 252
E V P+ + + +T L V+ Q ++ G + ++V + TT+L
Sbjct: 400 EQVV---GTPLLVKSGVEYTRLAVETAQ-DIHGHS--HVVMYLGTTSL 441
>gi|312092881|ref|XP_003147491.1| hypothetical protein LOAG_11927 [Loa loa]
Length = 479
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 112/194 (57%), Gaps = 11/194 (5%)
Query: 47 YVFFFFRETAVEYINCGK-SVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFP 105
YV+ + RE AVE+ +C +++SR+AR+C+ D GG S W +++KARLNCSIPG +P
Sbjct: 1 YVYIWLREQAVEHESCNDGAIYSRIARLCRSDHGGPRPYSNEWTSFVKARLNCSIPGHYP 60
Query: 106 FYFNEIQDIYKVPGDDTKF-------YGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFK 157
FYF++I+ I P + Y VF + G+ SAIC+F I+ I F K+
Sbjct: 61 FYFDQIEAIAP-PVNSLHLSEMKQLVYAVFRSPLAGISSSAICAFDIQQINDVFSESKYG 119
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFY 217
++ S W+ + S + RPG+C N++ LP+ + F R++PLM+EA+ + P+
Sbjct: 120 DRNNLQSLWMNAVYSGTSKYRPGKCTNNSRLLPEKAVAFARANPLMNEAIPNYFGAPIAI 179
Query: 218 RRDL-LFTHLVVDV 230
L FT +V+D
Sbjct: 180 HTGLDHFTQIVIDA 193
>gi|269784798|ref|NP_001161470.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D precursor
[Xenopus (Silurana) tropicalis]
gi|189442633|gb|AAI67391.1| Unknown (protein for MGC:135992) [Xenopus (Silurana) tropicalis]
Length = 729
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 115/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKA+L C E
Sbjct: 230 VYFFFTEVSVEYEFFSKLLIPRVARVCKGDQGGLRTLQKKWTSFLKAKLICH-SSENNLI 288
Query: 108 FNEIQDIYKVPGDDT---KFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN + D++ + D+ K YGVFT+ + SA+C++++ +E F GK+ AT
Sbjct: 289 FNVVSDVFILKHSDSSEPKIYGVFTSHLNNVGLSAVCAYNVSTVEEVFAKGKYMHSATVE 348
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP+PRPG C+N+ + LPD L F++ HPLMD++V+
Sbjct: 349 QSNTKWV-RYNGEVPKPRPGACINNEARAMNYTSSLNLPDMTLQFVKDHPLMDDSVSPVG 407
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
NKP RD+++T +VVD V+
Sbjct: 408 NKPKLVLRDVIYTQIVVDRVK 428
>gi|281338327|gb|EFB13911.1| hypothetical protein PANDA_009323 [Ailuropoda melanoleuca]
Length = 735
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VF+TS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSLRDRWSPLLYAVFSTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 LHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----HVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|355718429|gb|AES06264.1| sema domain, immunoglobulin domain , short basic domain, secreted,
3B [Mustela putorius furo]
Length = 559
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 245 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGD 304
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VF+TS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 305 THFDQLQDVFLLSLRDRWSPLLYAVFSTSSTVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 364
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 365 LHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPVGGRPL 423
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 424 FLQVGAGYTFTQITAD----RVAAADGHYDVLFIGTDAGTVLKVISV 466
>gi|417404531|gb|JAA49012.1| Putative semaphorin [Desmodus rotundus]
Length = 775
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 127/255 (49%), Gaps = 28/255 (10%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDIG-------KYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++ SR
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIADNEDRDDNKVYFFFTEKALEAENKAHAIHSR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ V D K
Sbjct: 266 VGRLCLNDVGGQRILVNKWSTFLKARLVCSVPGLNGIDTYFDELEDVFLVHTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCAS 384
Query: 185 --------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGSTKDYPDDAIRFARSHPLMYQPIKPVHKKPILVKTDGKYNLKQIAVDQVEAE 444
Query: 235 VFGTTSEYIVYFAAT 249
+Y V F T
Sbjct: 445 ----DGQYDVLFIGT 455
>gi|417404358|gb|JAA48938.1| Putative semaphorin [Desmodus rotundus]
Length = 750
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SR+ ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVETSPALGRLSVSRIGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGIEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRWTPLLYAVFSTSSGIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM + +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPILPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT +V D V Y V F T T L+ + V
Sbjct: 421 FLQVGAEYTFTQIVAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|380789223|gb|AFE66487.1| semaphorin-3B isoform 2 precursor [Macaca mulatta]
gi|384949352|gb|AFI38281.1| semaphorin-3B isoform 2 precursor [Macaca mulatta]
Length = 748
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 361 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGANYTFTQIATD----RVAAADGHYDVLFIGTDAGTVLKVISV 462
>gi|301770325|ref|XP_002920570.1| PREDICTED: semaphorin-3B-like [Ailuropoda melanoleuca]
Length = 748
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VF+TS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSLRDRWSPLLYAVFSTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 LHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPVGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----HVAAADGHYDVLFIGTDVGTVLKVISV 463
>gi|395733771|ref|XP_002813777.2| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F [Pongo abelii]
Length = 777
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 114/217 (52%), Gaps = 17/217 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
+ R + V V Q V Y V F T T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGTGT 487
>gi|402860037|ref|XP_003894442.1| PREDICTED: semaphorin-3B isoform 2 [Papio anubis]
Length = 635
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 248 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIATD----RVAAADGHYDVLFIGTDAGTVLKVISV 349
>gi|109039520|ref|XP_001102773.1| PREDICTED: semaphorin-3B isoform 1 [Macaca mulatta]
Length = 635
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 248 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIATD----RVAAADGHYDVLFIGTDAGTVLKVISV 349
>gi|426340619|ref|XP_004034226.1| PREDICTED: semaphorin-3B isoform 2 [Gorilla gorilla gorilla]
Length = 635
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVETAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 248 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 349
>gi|432865867|ref|XP_004070653.1| PREDICTED: semaphorin-3ab-like [Oryzias latipes]
Length = 759
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 20/219 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+ FF E A E GK ++SRVARVCK D GG+ L W+T+ KAR+ CS+PG
Sbjct: 238 VYVFFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGL 297
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+++QDI+ + G D K YG+FTTS+ L GSA+C + +ED+ RAF G F +
Sbjct: 298 QTHFDQLQDIFILNGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRAFKGNFLHKEG 357
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W + +VP PRPG C + T PD V+ F R+HPL+ E V +P
Sbjct: 358 PQYKWAE-FTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQEHVLPLGERP 416
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
+ R + F+ L+VD V+ S Y V F T +
Sbjct: 417 LLVRVGISYKFSKLLVDRVE----AVDSTYDVLFIGTDS 451
>gi|358411773|ref|XP_003582119.1| PREDICTED: semaphorin-3E-like [Bos taurus]
gi|359064625|ref|XP_003586003.1| PREDICTED: semaphorin-3E-like [Bos taurus]
Length = 715
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 128/255 (50%), Gaps = 28/255 (10%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 146 LGRLAQIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTR 205
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ + D K
Sbjct: 206 VGRLCVNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLHTRDHKNPVI 265
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + +VP PRPG C +
Sbjct: 266 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCAS 324
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 325 KVNGGRYETTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 384
Query: 235 VFGTTSEYIVYFAAT 249
+Y V F T
Sbjct: 385 ----DGQYDVLFIGT 395
>gi|440910561|gb|ELR60349.1| Semaphorin-3E, partial [Bos grunniens mutus]
Length = 737
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 128/255 (50%), Gaps = 28/255 (10%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 168 LGRLAQIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTR 227
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ + D K
Sbjct: 228 VGRLCVNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLHTRDHKNPVI 287
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W + +VP PRPG C +
Sbjct: 288 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCAS 346
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 347 KVNGGRYETTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 406
Query: 235 VFGTTSEYIVYFAAT 249
+Y V F T
Sbjct: 407 ----DGQYDVLFIGT 417
>gi|211970869|dbj|BAG82815.1| semaphorin-3A protein [Lonchura striata domestica]
Length = 236
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 22/214 (10%)
Query: 61 NCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVP 118
+ GK+ +R+ ++CK D GG L W T+LKARL CS+PG +F+E+QD++ +
Sbjct: 4 HTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMN 63
Query: 119 GDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVP 175
D K YGVFTTS+ GSA+C +S+ D+ R F+G + + W+P RVP
Sbjct: 64 SKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGPNYQWVP-YQGRVP 122
Query: 176 EPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHL 226
PRPG C + T+ LPD V+ F RSHP M V +N+P+ + D+ FT +
Sbjct: 123 YPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPIMIKTDVDYQFTQI 182
Query: 227 VVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
VVD V + +Y V F T T L+ V +
Sbjct: 183 VVDRVDAD----DGQYDVMFIGTDIGTVLKVVSI 212
>gi|397496064|ref|XP_003818863.1| PREDICTED: semaphorin-3B isoform 2 [Pan paniscus]
Length = 635
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 23/227 (10%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 129 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 188
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 189 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSI-FQGSAVCVYSMNDVRRAFLGPFAHKEGP 247
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 248 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPIGGRPL 306
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 307 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 349
>gi|444722109|gb|ELW62812.1| Semaphorin-4B [Tupaia chinensis]
Length = 818
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 127/231 (54%), Gaps = 26/231 (11%)
Query: 36 PDFVGS-YDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
P+ +GS + ++FFF ET E+ ++ SRVAR+CK D GG+ +L Q W ++LKA
Sbjct: 227 PESLGSLHGDDDKIYFFFSETGQEFEFFENTIVSRVARICKADRGGERVLQQRWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV---PGD--DTKFYGVFTTS--TTGLMGSAICSFSIED 147
+L CS P E F FN +QD++ + P D DT FYGVFT+ GSA+C F+++D
Sbjct: 287 QLLCSRP-EDGFPFNVLQDVFTLTPSPQDWRDTLFYGVFTSQWHRGTTEGSAVCVFTMKD 345
Query: 148 IERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---------VNDTETLPDSVLNFIR 198
++RAF G +KE T W + VP PRPG C +N + LPD VLNF++
Sbjct: 346 VQRAFHGLYKEVNRETQQWY-TATDPVPSPRPGACITNSTREKNINSSLQLPDRVLNFLK 404
Query: 199 SHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+H LMDE V ++P+ + + + + V + G Y V F T
Sbjct: 405 NHFLMDEQVR---SQPLLLQPQIRYQRVTV----HRTPGLHHTYDVLFLGT 448
>gi|344270786|ref|XP_003407223.1| PREDICTED: semaphorin-3E [Loxodonta africana]
Length = 775
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKARL CS+PG YF+E++DI+ + D K +G+F T++ G AIC
Sbjct: 284 WTTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDQKNPVIFGLFNTTSNIFRGHAICV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGRYGSTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
F RSHPLM + + KP+ + D + + VD V+ E +Y V F T
Sbjct: 403 RFARSHPLMYQTIKPAHKKPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGT 455
>gi|49274623|ref|NP_038688.2| semaphorin-4D precursor [Mus musculus]
gi|341942020|sp|O09126.2|SEM4D_MOUSE RecName: Full=Semaphorin-4D; AltName: Full=M-Sema G; AltName:
Full=Semaphorin-C-like 2; AltName: Full=Semaphorin-J;
Short=Sema J; AltName: CD_antigen=CD100; Flags:
Precursor
gi|49248072|gb|AAH49780.2| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D [Mus
musculus]
gi|148709159|gb|EDL41105.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D, isoform
CRA_a [Mus musculus]
gi|148709160|gb|EDL41106.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D, isoform
CRA_a [Mus musculus]
gi|148709161|gb|EDL41107.1| sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4D, isoform
CRA_a [Mus musculus]
Length = 861
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE----------TLPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 350 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 407
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 408 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLF 467
Query: 263 QDVSNTSDSICESSVGR 279
+D + S GR
Sbjct: 468 RDSEPVLTLLLSSKKGR 484
>gi|194221286|ref|XP_001916031.1| PREDICTED: semaphorin-3B [Equus caballus]
Length = 747
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRELAVEATPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDRWTPLLYAVFSTSSGIFQGSAVCMYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIKFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>gi|348581936|ref|XP_003476733.1| PREDICTED: semaphorin-3F-like isoform 2 [Cavia porcellus]
Length = 754
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAETAQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTHDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + + V V Q V Y V F T
Sbjct: 422 LVVRTGVPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|47224184|emb|CAG13104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 683
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 34/230 (14%)
Query: 32 NCLQ-PDFVGSYDIGK------------YVFFFFRETAVEYINCGKSVFSRVARVCKRDT 78
N LQ P FVGS I + ++FFF E E+ ++ SR+ARVCK D
Sbjct: 69 NWLQDPAFVGSAYIQESLPKGNEVGDDDKIYFFFSEVGKEFDFFDNTIVSRIARVCKGDL 128
Query: 79 GGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGD--DTKFYGVFTTS-- 131
GG+ +L + W T+LKA+L CS+P + F FN IQD++ + P D T FYGVFT+
Sbjct: 129 GGERVLQKKWTTFLKAQLLCSLPDDG-FPFNIIQDMFVLTPSPEDWKSTVFYGVFTSQWY 187
Query: 132 TTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--- 188
G SA+CSF+++ +E+AF G+++E T W + VPEPRPG C+ +
Sbjct: 188 KGGSESSAVCSFTMDQVEQAFTGRYREVNRETQQWY-TYNHPVPEPRPGMCITNEARKHG 246
Query: 189 ------LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+PD VLNF++ LMD + ++P+ +R+ +T + V VQ
Sbjct: 247 VSSSLHMPDKVLNFVKDRFLMDSVIR---SQPLLLKRNARYTQIAVHRVQ 293
>gi|348514696|ref|XP_003444876.1| PREDICTED: semaphorin-3ab-like [Oreochromis niloticus]
Length = 747
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 121/219 (55%), Gaps = 20/219 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+ FF E A E GK ++SRVARVCK D GG+ L W+T+ KAR+ CS+PG
Sbjct: 222 VYVFFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARMVCSVPGPDGL 281
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+++QDI+ + G D K YG+FTTS+ L GSA+C + +ED+ RAF G F +
Sbjct: 282 QTHFDQLQDIFILHGKDKKNPLIYGLFTTSSDILNGSAVCVYRMEDVVRAFKGNFLHKEG 341
Query: 162 STSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W + +VP PRPG C + T PD V+ F R+HPL+ E V +P
Sbjct: 342 PQYKWAE-FTGKVPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQENVLPLGERP 400
Query: 215 VFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
+ R + FT L+VD V+ V GT Y V F T +
Sbjct: 401 LLVRVGVHYKFTKLLVDRVE-AVDGT---YDVLFIGTDS 435
>gi|1750257|gb|AAC52964.1| semaphorin M-sema G [Mus musculus]
Length = 861
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE----------TLPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 350 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 407
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 408 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLF 467
Query: 263 QDVSNTSDSICESSVGR 279
+D + S GR
Sbjct: 468 RDFEPVLTLLLSSKKGR 484
>gi|395539086|ref|XP_003771504.1| PREDICTED: semaphorin-3E, partial [Sarcophilus harrisii]
Length = 736
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 120/237 (50%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E N ++++RV RVC D GG+ IL
Sbjct: 185 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALESENNAHTIYTRVGRVCANDMGGQRILVNK 244
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG +F+E++DI+ + D K +G+F T++ G AIC
Sbjct: 245 WSTFLKARLVCSVPGMNGIDTHFDELEDIFLLQTRDNKNPVIFGLFNTTSNIFRGYAICV 304
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 305 YHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDEAI 363
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
F RSHPLM + V +P+ + D + + VD V+ E +Y V F T
Sbjct: 364 RFARSHPLMHQPVKPVHKRPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGT 416
>gi|327261927|ref|XP_003215778.1| PREDICTED: semaphorin-3F-like [Anolis carolinensis]
Length = 760
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 154/318 (48%), Gaps = 50/318 (15%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A+E G +V +RV RVC D GG+ L W T+LKARL CS+ GE
Sbjct: 235 LYFFFREKALEGA-VGPAVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGEDGVE 293
Query: 106 FYFNEIQDIYKVPGDDTKF---YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ +P D K YGVF+T + GSA+C +S+ DI F G F +
Sbjct: 294 TFFDELRDVFLLPTQDEKHPLVYGVFSTLGSVFRGSAVCVYSMADIRTVFNGPFAHKEGH 353
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W + RVP PRPG C + T PD ++ F+R+HPLM AV +P
Sbjct: 354 NYQW-GSYTGRVPYPRPGACPGGTFTPGLRSTREFPDDLVTFVRAHPLMYNAVYPLQRRP 412
Query: 215 VFYRRDLL--FTHLVVDVV-----QYEVF------GTTSEYIVY---------------- 245
+ R ++ FT L VD+V +YEV GT + IV
Sbjct: 413 LLVRTNVPYSFTTLAVDLVDAVDGRYEVLFLGTDQGTVQKVIVLPKEQGVLEELTLEEVE 472
Query: 246 -FAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLP--ASM 302
F + ++T+++ + Q ++ + + S+ R ++ +G++ C + P A
Sbjct: 473 VFRVPSPVKTLWISSKRQQLYVSSDVGVSQLSLHRCRE---YGEACADCCLARDPYCAWD 529
Query: 303 ANQPMSWYHYSKDKGRYQ 320
+ + H +K + R Q
Sbjct: 530 GQRCTRYSHTAKRRSRRQ 547
>gi|207667290|gb|ACI25102.1| semaphorin 5b, partial [Danio rerio]
Length = 245
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +YD+G + FFF RE AVE+ +CGK+ +SRVARVCK D GG+ +L W + KA
Sbjct: 119 EPHFISAYDVGLFTFFFLRENAVEH-DCGKTAYSRVARVCKNDIGGRFLLEDTWTAFTKA 177
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C++++ I +AF G
Sbjct: 178 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAYNLSAITQAFNG 236
Query: 155 KFKEQ 159
F+ Q
Sbjct: 237 PFRSQ 241
>gi|348581934|ref|XP_003476732.1| PREDICTED: semaphorin-3F-like isoform 1 [Cavia porcellus]
Length = 785
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAETAQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTHDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + + V V Q V Y V F T
Sbjct: 453 LVVRTGVPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|26353700|dbj|BAC40480.1| unnamed protein product [Mus musculus]
Length = 799
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 169 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 227
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 228 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 287
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE----------TLPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 288 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 345
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 346 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLF 405
Query: 263 QDVSNTSDSICESSVGR 279
+D + S GR
Sbjct: 406 RDSEPVLTLLLSSKKGR 422
>gi|301768493|ref|XP_002919665.1| PREDICTED: semaphorin-4D-like [Ailuropoda melanoleuca]
Length = 860
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 229 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 287
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + D K YGVFT + SA+C++++ E F GK+ + AT
Sbjct: 288 FNVLQDVFVLRAPDLKEPVIYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 347
Query: 162 -STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N + +LPD L F++ HPLMD +V D
Sbjct: 348 QSHTKWV-RYNGAVPTPRPGACINREARAANFSSSLSLPDKTLQFVKDHPLMDSSVTPID 406
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P R D+ +T +VVD Q
Sbjct: 407 NRPRLIRSDVNYTQIVVDRTQ 427
>gi|74210023|dbj|BAE21302.1| unnamed protein product [Mus musculus]
Length = 814
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTET----------LPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 350 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 407
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 408 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLF 467
Query: 263 QDVSNTSDSICESSVGR 279
+D + S GR
Sbjct: 468 RDSEPVLTLLLSSKKGR 484
>gi|351711906|gb|EHB14825.1| Semaphorin-3F [Heterocephalus glaber]
Length = 845
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 273 LYFFFRERSAETAQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 331
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 332 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 391
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 392 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 450
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 451 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 483
>gi|281344472|gb|EFB20056.1| hypothetical protein PANDA_008310 [Ailuropoda melanoleuca]
Length = 862
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 289
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + D K YGVFT + SA+C++++ E F GK+ + AT
Sbjct: 290 FNVLQDVFVLRAPDLKEPVIYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N + +LPD L F++ HPLMD +V D
Sbjct: 350 QSHTKWV-RYNGAVPTPRPGACINREARAANFSSSLSLPDKTLQFVKDHPLMDSSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P R D+ +T +VVD Q
Sbjct: 409 NRPRLIRSDVNYTQIVVDRTQ 429
>gi|119914707|ref|XP_609627.3| PREDICTED: semaphorin-3F isoform 1 [Bos taurus]
gi|297488665|ref|XP_002697079.1| PREDICTED: semaphorin-3F [Bos taurus]
gi|296474903|tpg|DAA17018.1| TPA: sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3 F-like [Bos taurus]
gi|440909020|gb|ELR58979.1| Semaphorin-3F [Bos grunniens mutus]
Length = 792
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE ++E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSIEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +A+ +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAIYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|209862829|ref|NP_001100049.1| semaphorin-3E precursor [Rattus norvegicus]
gi|149046642|gb|EDL99467.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3E (predicted) [Rattus
norvegicus]
Length = 775
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDPEDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG +F+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGSTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
>gi|354476489|ref|XP_003500457.1| PREDICTED: semaphorin-3F isoform 2 [Cricetulus griseus]
Length = 754
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPMQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 422 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|211970873|dbj|BAG82817.1| semaphorin-3A protein [Coturnix japonica]
Length = 230
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 116/220 (52%), Gaps = 22/220 (10%)
Query: 64 KSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDD 121
K + +R+ ++CK D GG L W T+LKARL CS+PG +F+E+QD++ + D
Sbjct: 1 KPLHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKD 60
Query: 122 TK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPR 178
K YGVFTTS+ GSA+C +S+ D+ R F+G + + W+P RVP PR
Sbjct: 61 PKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGPNYQWVP-YQGRVPYPR 119
Query: 179 PGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVD 229
PG C + T+ LPD V+ F RSHP M V +N+P+ + D+ FT +VVD
Sbjct: 120 PGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINNRPIMIKTDVDYQFTQIVVD 179
Query: 230 VVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
V E +Y V F T T L+ V + D+
Sbjct: 180 RVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDLE 215
>gi|348521856|ref|XP_003448442.1| PREDICTED: semaphorin-3F-like [Oreochromis niloticus]
Length = 777
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 121/232 (52%), Gaps = 27/232 (11%)
Query: 48 VFFFFRETAVEYINCGKSVF--SRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE-- 103
++FFFRE A E G+S SR+ R+C D GG L W+T+LKARL CS+PG
Sbjct: 261 LYFFFREKASEM---GQSPMTQSRIGRICLNDDGGHCCLVNKWSTFLKARLICSVPGADG 317
Query: 104 FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
+F+E++D+Y P DTK YGVF+ S + GSA+C +S+ DI F G F +
Sbjct: 318 IETHFDELRDVYIQPTQDTKNPVIYGVFSVSGSVFKGSAVCVYSMADIRMVFNGPFAHKE 377
Query: 161 TSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
W+P + ++P PRPG C + T+ PD V+NF+R+HP M AV
Sbjct: 378 GPNYQWVP-YTGKIPYPRPGTCPGGTFTPNLKSTKDYPDEVINFMRNHPTMYNAVYPVHK 436
Query: 213 KPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAAT--TTLRTVFVKVR 260
+P+ R D FT + VD +V Y V F T T++ V V R
Sbjct: 437 RPLVVRTNVDYEFTTIAVD----QVTAADGSYEVLFLGTDRGTVQKVIVLPR 484
>gi|126307819|ref|XP_001374564.1| PREDICTED: semaphorin-4A [Monodelphis domestica]
Length = 743
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 18/225 (8%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV S + V+FFF ETA E+ K SRVARVCK D GG+ +L + W T+
Sbjct: 206 LQPDASFVASIPSTQVVYFFFGETAKEFDFFEKLTISRVARVCKNDVGGEKLLQKKWTTF 265
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ G+ P FN I+ +P D ++ Y +FT+ SA+C FS
Sbjct: 266 LKAQLLCAQSGQLP--FNVIRHAVLMPADPPASSRVYAIFTSQWQVGETRSSAVCEFSFA 323
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DIE+ F GK+KE +S W S V PRPG C + D L F++ H LMDE
Sbjct: 324 DIEKVFEGKYKEMNKESSRWN-TYSGPVSNPRPGSCSVGPSS--DKALTFVKEHFLMDEK 380
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V KP+ + D+ +T L V+ + +V G +Y+V + T+T
Sbjct: 381 VV---GKPLLVKLDVEYTKLAVEAAR-DVSG--KDYLVMYLGTST 419
>gi|426249513|ref|XP_004018494.1| PREDICTED: semaphorin-3F [Ovis aries]
Length = 792
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE ++E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSIEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +A+ +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAIYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGTPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|354476487|ref|XP_003500456.1| PREDICTED: semaphorin-3F isoform 1 [Cricetulus griseus]
gi|344252810|gb|EGW08914.1| Semaphorin-3F [Cricetulus griseus]
Length = 785
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPMQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|403224995|ref|NP_001012078.2| semaphorin-4A precursor [Rattus norvegicus]
gi|149048134|gb|EDM00710.1| rCG62756, isoform CRA_a [Rattus norvegicus]
gi|149048135|gb|EDM00711.1| rCG62756, isoform CRA_a [Rattus norvegicus]
gi|149048136|gb|EDM00712.1| rCG62756, isoform CRA_a [Rattus norvegicus]
gi|149048137|gb|EDM00713.1| rCG62756, isoform CRA_a [Rattus norvegicus]
Length = 762
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + + V+FFF ETA E+ + SRVA+VCK D GG+ +L + W T+
Sbjct: 229 LHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYTSRVAQVCKNDVGGEKLLQKKWTTF 288
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D + Y VFT+ G SA+C+FS+
Sbjct: 289 LKAQLLCAQPGQLP--FNIIRHAVLLPADSPSVPRIYAVFTSQWQVGGTRSSAVCAFSLT 346
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DIER F GK+KE TS W S V PRPG C + D L F++ H LMDE
Sbjct: 347 DIERVFKGKYKELNKETSRWTTYRGSEV-NPRPGSCSMGPSS--DKALTFMKDHFLMDE- 402
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
H P+ + + +T L V+ Q +S ++Y +T
Sbjct: 403 --HVVGAPLLVKSGVEYTQLAVETAQG--LDGSSHVVLYLGTST 442
>gi|395844638|ref|XP_003795064.1| PREDICTED: semaphorin-4D [Otolemur garnettii]
Length = 867
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 17/200 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY + + R+ARVCK D GG L + W ++LKARL CS +
Sbjct: 229 VYFFFTEVSVEYEFMFRVLLPRIARVCKGDQGGLRTLQKKWTSFLKARLICSR-QDSGLV 287
Query: 108 FNEIQDIY--KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT--- 161
FN ++D++ + PG D FYG+FT + SA+C++ + +E F GK+ + AT
Sbjct: 288 FNVLRDVFVLRAPGLDPVFYGLFTPQLNNVGLSAVCAYDLSTVEEVFSQGKYMQSATVEQ 347
Query: 162 STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRDN 212
S + W+ + VP PRPG C++ + LPD L F++ HPLMD++V DN
Sbjct: 348 SHTKWV-RYNGPVPTPRPGACIDREVRAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDN 406
Query: 213 KPVFYRRDLLFTHLVVDVVQ 232
+P ++D+ +T +VVD Q
Sbjct: 407 RPKLVKKDVNYTQIVVDRTQ 426
>gi|51858687|gb|AAH81943.1| Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM)
and short cytoplasmic domain, (semaphorin) 4A [Rattus
norvegicus]
Length = 760
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + + V+FFF ETA E+ + SRVA+VCK D GG+ +L + W T+
Sbjct: 227 LHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYTSRVAQVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D + Y VFT+ G SA+C+FS+
Sbjct: 287 LKAQLLCAQPGQLP--FNIIRHAVLLPADSPSVPRIYAVFTSQWQVGGTRSSAVCAFSLT 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DIER F GK+KE TS W S V PRPG C + D L F++ H LMDE
Sbjct: 345 DIERVFKGKYKELNKETSRWTTYRGSEV-NPRPGSCSMGPSS--DKALTFMKDHFLMDE- 400
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
H P+ + + +T L V+ Q +S ++Y +T
Sbjct: 401 --HVVGAPLLVKSGVEYTQLAVETAQG--LDGSSHVVLYLGTST 440
>gi|395856477|ref|XP_003800655.1| PREDICTED: semaphorin-3F [Otolemur garnettii]
Length = 786
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 276 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 334
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 335 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 394
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 395 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 453
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 454 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 486
>gi|296229154|ref|XP_002760138.1| PREDICTED: semaphorin-4A [Callithrix jacchus]
Length = 761
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 21/226 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + ++V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+
Sbjct: 227 LHPDASFVAAIPSTQFVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D Y VFT+ G SA+C+FS+
Sbjct: 287 LKAQLLCTQPGQLP--FNVIRHAVLLPADSLTAPHIYAVFTSQWQVGGTRNSAVCAFSLM 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DIER F GK+KE TS W + R PE PRPG C + D L F++ H LMD
Sbjct: 345 DIERVFEGKYKELNKETSRW---TTYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMD 399
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
E V P+ + + +T L V+ Q S ++Y TT
Sbjct: 400 EQVV---GTPLLVKSGVEYTRLAVETAQD--LDGHSHLVMYLGTTT 440
>gi|431892475|gb|ELK02912.1| Semaphorin-4D [Pteropus alecto]
Length = 554
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + R+ARVCK D GG L + W ++LKARL CS P +
Sbjct: 301 VYFFFTEVSVEYEFVFKLMIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 359
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN ++DI+ + PG + FYGVFT + SA+C++++ E F GK+ + AT
Sbjct: 360 FNVLRDIFVLRSPGLKEPVFYGVFTPQLNNIGLSAVCAYNLSTAEAVFSRGKYMQSATVE 419
Query: 162 -STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N + LPD L F++ HPLMD++V D
Sbjct: 420 QSHTKWV-RYNGPVPTPRPGACINREARAANVSSSLNLPDKTLQFVKDHPLMDDSVTPID 478
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
N+P + D+ +T +VVD Q
Sbjct: 479 NRPRLIKSDVSYTQIVVDRTQ 499
>gi|426340609|ref|XP_004034221.1| PREDICTED: semaphorin-3F isoform 2 [Gorilla gorilla gorilla]
Length = 754
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 422 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|301770333|ref|XP_002920574.1| PREDICTED: LOW QUALITY PROTEIN: semaphorin-3F-like [Ailuropoda
melanoleuca]
Length = 785
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 276 LYFFFRERSAEAAQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 334
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 335 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 394
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 395 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 453
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 454 LVVRTAAPYRLTTVAVDQ--VDAADGRYEVLFLGT 486
>gi|351711636|gb|EHB14555.1| Semaphorin-4D [Heterocephalus glaber]
Length = 862
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 21/218 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + R+ARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSWP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY +FT + SA+C++++ E F GK+ + AT
Sbjct: 290 FNVLQDVFVLRTPGLKEPVFYALFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+N LPD L F++ HPLMD++V D
Sbjct: 350 QSHTKWV-RYNGPVPSPRPGACINSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
N+P ++D+ +T +VVD Q + GT Y V F +T
Sbjct: 409 NRPKLIKKDVNYTQIVVDRAQ-ALDGTV--YDVMFVST 443
>gi|391342866|ref|XP_003745736.1| PREDICTED: semaphorin-5A-like [Metaseiulus occidentalis]
Length = 979
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P FV S+++G +V+FFFRE A+EY +CGK++FSR+ RVCK D G S++W T+LK R
Sbjct: 204 PQFVNSFEVGDFVYFFFRENAIEYSSCGKNIFSRIGRVCKNDQGSP-YNSKSWTTFLKGR 262
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
LNCS+PG PFYFNE+Q + + + FY FTT + GSA+CS+S+++I RAF G
Sbjct: 263 LNCSLPGAIPFYFNEMQSVDYIKRQEM-FYITFTTGENSIYGSAVCSYSLDEINRAFNGP 321
Query: 156 F 156
Sbjct: 322 L 322
>gi|410951229|ref|XP_003982301.1| PREDICTED: semaphorin-3F isoform 2 [Felis catus]
Length = 754
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 422 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|109039548|ref|XP_001103599.1| PREDICTED: semaphorin-3F isoform 5 [Macaca mulatta]
Length = 754
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 422 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|355718450|gb|AES06272.1| sema domain, immunoglobulin domain , short basic domain, secreted,
3F [Mustela putorius furo]
Length = 785
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|149728886|ref|XP_001496563.1| PREDICTED: semaphorin-3F [Equus caballus]
Length = 785
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|444715438|gb|ELW56306.1| Semaphorin-3E [Tupaia chinensis]
Length = 745
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 194 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLCVNDVGGQRILVNK 253
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ + D K +G+F T++ G AIC
Sbjct: 254 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLHTRDHKNPVIFGLFNTTSNIFRGHAICV 313
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 314 YHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAI 372
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
F RSHPLM + + KP+ + D + + VD V+ E +Y V F T
Sbjct: 373 RFARSHPLMYQPIKPAHKKPILVKTDGKYNLRQIAVDRVEAE----DGQYDVLFIGT 425
>gi|403293749|ref|XP_003937874.1| PREDICTED: semaphorin-4A isoform 1 [Saimiri boliviensis
boliviensis]
gi|403293751|ref|XP_003937875.1| PREDICTED: semaphorin-4A isoform 2 [Saimiri boliviensis
boliviensis]
Length = 761
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 21/226 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + ++V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+
Sbjct: 227 LHPDAAFVAAIPSTQFVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D Y VFT+ G SA+C+FS+
Sbjct: 287 LKAQLLCTQPGQLP--FNVIRHAVLLPADSPTAPHIYAVFTSQWQVGGTRSSAVCAFSLM 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DIER F GK+KE TS W + R PE PRPG C + D L F++ H LMD
Sbjct: 345 DIERVFKGKYKELNKETSRW---TTYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMD 399
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
E V P+ + + +T L V+ Q S ++Y TT
Sbjct: 400 EQVV---GTPLLVKSGVEYTRLAVETAQD--LDGHSHLVMYLGTTT 440
>gi|119585447|gb|EAW65043.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_a [Homo sapiens]
gi|119585449|gb|EAW65045.1| sema domain, immunoglobulin domain (Ig), short basic domain,
secreted, (semaphorin) 3F, isoform CRA_a [Homo sapiens]
Length = 754
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 28/223 (12%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLF--THLVVDVV-----QYEVF------GTTSEYIV 244
+ R + T + VD V +YEV GT + IV
Sbjct: 422 LVVRTGAPYRLTTIAVDQVDAADGRYEVLFLGTDRGTVQKVIV 464
>gi|57101622|ref|XP_541879.1| PREDICTED: semaphorin-3F [Canis lupus familiaris]
Length = 786
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|441610293|ref|XP_003257140.2| PREDICTED: semaphorin-3F isoform 1 [Nomascus leucogenys]
Length = 788
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 278 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 336
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 337 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 396
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 397 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 455
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 456 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 488
>gi|410951227|ref|XP_003982300.1| PREDICTED: semaphorin-3F isoform 1 [Felis catus]
Length = 785
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|402860053|ref|XP_003894450.1| PREDICTED: semaphorin-3F isoform 2 [Papio anubis]
Length = 754
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 422 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 454
>gi|397496104|ref|XP_003818883.1| PREDICTED: semaphorin-3F isoform 2 [Pan paniscus]
Length = 754
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 28/223 (12%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLF--THLVVDVV-----QYEVF------GTTSEYIV 244
+ R + T + VD V +YEV GT + IV
Sbjct: 422 LVVRTGAPYRLTTIAVDQVDAADGRYEVLFLGTDRGTVQKVIV 464
>gi|444510614|gb|ELV09636.1| Semaphorin-3F [Tupaia chinensis]
Length = 1311
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 118/225 (52%), Gaps = 19/225 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 902 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 960
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 961 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 1020
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 1021 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 1079
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q V Y V F T T++ V V
Sbjct: 1080 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVPFLGTDRGTVQKVIV 1122
>gi|355559618|gb|EHH16346.1| hypothetical protein EGK_11616 [Macaca mulatta]
Length = 785
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|426340607|ref|XP_004034220.1| PREDICTED: semaphorin-3F isoform 1 [Gorilla gorilla gorilla]
Length = 785
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|402860051|ref|XP_003894449.1| PREDICTED: semaphorin-3F isoform 1 [Papio anubis]
Length = 785
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>gi|109017331|ref|XP_001116400.1| PREDICTED: semaphorin-4A-like isoform 1 [Macaca mulatta]
Length = 628
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 21/226 (9%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+
Sbjct: 95 LHPDASFVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQRKWTTF 154
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIE 146
LKA+L C+ PG+ P FN I+ +P D + Y VFT+ G SA+C+FS+
Sbjct: 155 LKAQLLCTKPGQLP--FNVIRHAVLLPADSPTAPRIYAVFTSQWQIGGTRSSAVCAFSLL 212
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DIER F GK+KE TS W + R PE PRPG C + D L F++ H LMD
Sbjct: 213 DIERVFKGKYKELNKETSRW---TTYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMD 267
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
E V P+ + + +T L V+ Q S ++Y TT
Sbjct: 268 EQVV---GTPLLVKSGVEYTRLAVETAQG--LDGRSHLVMYLGTTT 308
>gi|291394891|ref|XP_002713905.1| PREDICTED: semaphorin 3E [Oryctolagus cuniculus]
Length = 838
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 120/237 (50%), Gaps = 27/237 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E + ++++RV R+C D GG+ IL
Sbjct: 260 EPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAEHGAHAIYARVGRLCVNDAGGQRILVNK 319
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ + D K +G+F T++ G AIC
Sbjct: 320 WSTFLKARLVCSVPGVNGIDTYFDELEDVFLLQTRDHKNPVIFGLFNTTSNIFRGHAICV 379
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
+ + I AF G + + W + RVP PRPG C + T+ PD +
Sbjct: 380 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGRVPYPRPGSCASKVNGGRYASTKDYPDDAV 438
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
F R HPLM + + KP+ + D + +VVD V+ E +Y V F T
Sbjct: 439 RFTRGHPLMYQPIKPAHKKPILVKTDGKYNLKQIVVDRVEAE----DGQYDVLFIGT 491
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,865,777,933
Number of Sequences: 23463169
Number of extensions: 239344544
Number of successful extensions: 455885
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 448653
Number of HSP's gapped (non-prelim): 2838
length of query: 378
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 234
effective length of database: 8,980,499,031
effective search space: 2101436773254
effective search space used: 2101436773254
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 78 (34.7 bits)