BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10772
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XZC8|SEM2A_SCHGR Semaphorin-2A OS=Schistocerca gregaria GN=SEMA-2A PE=2 SV=1
Length = 697
Score = 357 bits (915), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
P+FVGS+D+G+YV FFFRETAVEYINCGKSV+SRVARVCK+D GGKNILSQNWAT+LKA
Sbjct: 221 NPNFVGSFDVGEYVLFFFRETAVEYINCGKSVYSRVARVCKKDVGGKNILSQNWATFLKA 280
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSIPGEFPFYFNEIQ +YK+P D KF+GVF+TS TGL GSAICSF+++DI+ F G
Sbjct: 281 RLNCSIPGEFPFYFNEIQGVYKMPNTD-KFFGVFSTSVTGLTGSAICSFTLKDIQEVFSG 339
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQATS+SAWLPVL SRVP+PRPG+CVNDTE LPD+VLNFIRSHPLMD AV+H KP
Sbjct: 340 KFKEQATSSSAWLPVLPSRVPDPRPGECVNDTELLPDTVLNFIRSHPLMDGAVSHEGGKP 399
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
VFY+RD+LFT LVVD ++ + G EYIVY+A T+T
Sbjct: 400 VFYKRDVLFTQLVVDKLKVNLVGKNMEYIVYYAGTST 436
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 91/117 (77%), Gaps = 2/117 (1%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+NTS ++CE SV + K VTWGQS+HL CF+K+P +++Q +SW HY+KDKGRY
Sbjct: 528 LLQDVTNTSANLCEHSVMKKKLIVTWGQSIHLGCFLKVPEVLSSQTISWVHYTKDKGRYP 587
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPTR 377
I +R DK+I T + GLV+++V + D+G+YDCWLG ++LC++N+TVDAH AP R
Sbjct: 588 IVYRPDKYIETSEHGLVLISVTDSDSGRYDCWLGGSLLCSYNITVDAHR--CSAPGR 642
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
+ +S+ ++SLY ASD ++QI LVMC HRY NCLQ
Sbjct: 471 LHLSKEYKSLYAASDNIVRQIELVMCHHRYSNCLQ 505
>sp|Q24323|SEM2A_DROME Semaphorin-2A OS=Drosophila melanogaster GN=Sema-2a PE=1 SV=2
Length = 724
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 185/219 (84%), Gaps = 2/219 (0%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 252 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 311
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 312 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 371
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 372 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 431
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T R
Sbjct: 432 VYYKRDLVFTKLVVDKIRIDIL--NQEYIVYYVGTNLGR 468
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 87/111 (78%)
Query: 258 KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
++ LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKG
Sbjct: 554 ELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKG 613
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
RY+I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 614 RYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 664
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 500 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 534
>sp|Q26473|SEM1A_SCHAM Semaphorin-1A OS=Schistocerca americana GN=SEMA-1A PE=1 SV=1
Length = 730
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 150/243 (61%), Gaps = 6/243 (2%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV + + ++FFFFRETAVEYINCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 206 PNFVNTMEYNDFIFFFFRETAVEYINCGKAIYSRVARVCKHDKGGPHQFGDRWTSFLKSR 265
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCS+PG++PFYFNEIQ + G K YGVFTT + GSA+C+FS++ I
Sbjct: 266 LNCSVPGDYPFYFNEIQSTSDIIEGNYGGQVEKLIYGVFTTPVNSIGGSAVCAFSMKSIL 325
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
+F G FKEQ T S WL V S +VPEPRPGQCVND+ TLPD +NF++SH LMDEAV
Sbjct: 326 ESFDGPFKEQETMNSNWLAVPSLKVPEPRPGQCVNDSRTLPDVSVNFVKSHTLMDEAVPA 385
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
+P+ R L + + V Q Y V F T + + D S+T
Sbjct: 386 FFTRPILIRISLQYRFTKIAVDQQVRTPDGKAYDVLFIGTDDGKVIKALNSASFDSSDTV 445
Query: 270 DSI 272
DS+
Sbjct: 446 DSV 448
>sp|Q24322|SEM1A_DROME Semaphorin-1A OS=Drosophila melanogaster GN=Sema-1a PE=2 SV=2
Length = 850
Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 201 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 260
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD-----DTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G YGVF T + + GSA+C+F+++DI
Sbjct: 261 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 320
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 321 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 380
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD G T Y V F T
Sbjct: 381 FFSQPILVRTSTIYRFTQIAVDAQIKTPGGKT--YDVIFVGT 420
>sp|Q26972|SEM1A_TRICF Semaphorin-1A OS=Tribolium confusum GN=SEMA-1A PE=2 SV=1
Length = 712
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 132/203 (65%), Gaps = 10/203 (4%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S G Y+FFF+RETAVEY+NCGK ++SRVARVCK D GG + W ++LKAR
Sbjct: 204 PNFVNSVAYGDYIFFFYRETAVEYMNCGKVIYSRVARVCKDDKGGPHQSRDRWTSFLKAR 263
Query: 96 LNCSIPGEFPFYFNEIQDIYKV-----PGDDTK--FYGVFTTSTTGLMGSAICSFSIEDI 148
LNCSIPGE+PFYF+EIQ + DD+K YG+ TT + GSAIC++ + DI
Sbjct: 264 LNCSIPGEYPFYFDEIQSTSDIVEGRYNSDDSKKIIYGILTTPVNAIGGSAICAYQMADI 323
Query: 149 ERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVA 208
R F G FK Q T S WLPV + VPEPRPGQCV D+ LPD +NFI++H LM E V
Sbjct: 324 LRVFEGSFKHQETINSNWLPVPQNLVPEPRPGQCVRDSRILPDKNVNFIKTHSLM-EDVP 382
Query: 209 HRDNKPVFYRRDLL--FTHLVVD 229
KPV R L FT + VD
Sbjct: 383 ALFGKPVLVRVSLQYRFTAITVD 405
>sp|Q8NFY4|SEM6D_HUMAN Semaphorin-6D OS=Homo sapiens GN=SEMA6D PE=2 SV=1
Length = 1073
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + + V G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAISVDHSA--GPYQNYTVIFVGS 443
>sp|Q5R7F5|SEM6D_PONAB Semaphorin-6D OS=Pongo abelii GN=SEMA6D PE=2 SV=1
Length = 1017
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 140/229 (61%), Gaps = 19/229 (8%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L+FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + T + VD G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIAVD----HSAGPYQNYTVIFVGS 443
>sp|Q76KF0|SEM6D_MOUSE Semaphorin-6D OS=Mus musculus GN=Sema6d PE=2 SV=1
Length = 1073
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L ++W ++LK
Sbjct: 220 EPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLK 279
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+FS++DIE+
Sbjct: 280 ARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCAFSMDDIEK 338
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ T S W V +VP+PRPG C + PD L FI+SHPL
Sbjct: 339 VFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPL 398
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
MD AV ++P F + + + ++V + G Y V F +
Sbjct: 399 MDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGS 443
>sp|O35464|SEM6A_MOUSE Semaphorin-6A OS=Mus musculus GN=Sema6a PE=1 SV=2
Length = 1031
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>sp|Q9H2E6|SEM6A_HUMAN Semaphorin-6A OS=Homo sapiens GN=SEMA6A PE=1 SV=2
Length = 1030
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 15/211 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDV-VLATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVV 231
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVDTA 428
>sp|Q9WTM3|SEM6C_MOUSE Semaphorin-6C OS=Mus musculus GN=Sema6c PE=2 SV=1
Length = 931
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 224 EPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 283
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 284 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 343
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 344 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVLLFIKAHPLL 403
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 404 DPAVPPATHQPLLTLTSRALLTQVAVD 430
>sp|Q9H3T2|SEM6C_HUMAN Semaphorin-6C OS=Homo sapiens GN=SEMA6C PE=2 SV=4
Length = 930
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 148/268 (55%), Gaps = 20/268 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 223 EPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 282
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F +++IER
Sbjct: 283 LRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERG 342
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV RVP PRPG C + + LPD VL FI++HPL+
Sbjct: 343 FEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVLTFIKAHPLL 402
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVDVVQYE------VFGTTSEYIVYFAATTTLRTVF 256
D AV ++P+ L T + VD + +F +++ V T R+
Sbjct: 403 DPAVPPVTHQPLLTLTSRALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLTPGGRSGG 462
Query: 257 VKVRLLQDVSNTSDSICESSVGRLKQTV 284
+ LL+++ S + C R QT
Sbjct: 463 PEPILLEEIDAYSPARCSGK--RTAQTA 488
>sp|Q9WTL3|SEM6C_RAT Semaphorin-6C OS=Rattus norvegicus GN=Sema6c PE=2 SV=1
Length = 960
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 127/207 (61%), Gaps = 12/207 (5%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L ++W ++LK
Sbjct: 222 EPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLK 281
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVPG--DDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
RLNCS+PG+ FYF+ +Q + + +GVFTT T + GSA+C+F ++DIER
Sbjct: 282 LRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERG 341
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVLNFIRSHPLM 203
F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL FI++HPL+
Sbjct: 342 FEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLL 401
Query: 204 DEAVAHRDNKPVF-YRRDLLFTHLVVD 229
D AV ++P+ L T + VD
Sbjct: 402 DPAVPPATHQPLLTLTSRALLTQVAVD 428
>sp|Q9P283|SEM5B_HUMAN Semaphorin-5B OS=Homo sapiens GN=SEMA5B PE=2 SV=4
Length = 1151
Score = 179 bits (453), Expect = 5e-44, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 130/205 (63%), Gaps = 15/205 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPE------PRPGQCVNDTE-TLPDSVLNFIRSHPLMDEAV 207
F+ Q +AWLP+ ++ +P P G N TE +L D+ F LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAV 455
Query: 208 AHRDNKPVFYRRDLLFTHLVVDVVQ 232
+P + + F+HLVVD+VQ
Sbjct: 456 QPVTPEPCVTQDSVRFSHLVVDLVQ 480
>sp|D3ZTD8|SEM5A_RAT Semaphorin-5A OS=Rattus norvegicus GN=Sema5a PE=1 SV=1
Length = 1074
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 129/222 (58%), Gaps = 23/222 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
V P F + F+H+ VDVVQ T +I+Y A
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---DTLVHIIYLA 423
>sp|Q62217|SEM5A_MOUSE Semaphorin-5A OS=Mus musculus GN=Sema5a PE=2 SV=1
Length = 1077
Score = 177 bits (450), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 123/207 (59%), Gaps = 20/207 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRPARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIASSAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F + F+HL VDVVQ
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQ 411
>sp|Q13591|SEM5A_HUMAN Semaphorin-5A OS=Homo sapiens GN=SEMA5A PE=1 SV=3
Length = 1074
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 137/244 (56%), Gaps = 26/244 (10%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLP-----YPNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ E +V+ T KVR+ +
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQ------GREALVHIIYLATDYGTIKKVRVPLNQ 438
Query: 266 SNTS 269
+++S
Sbjct: 439 TSSS 442
>sp|Q60519|SEM5B_MOUSE Semaphorin-5B OS=Mus musculus GN=Sema5b PE=2 SV=2
Length = 1093
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 142/239 (59%), Gaps = 22/239 (9%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTETLPDS-----VLNFIRSHPLMDEAVA 208
F+ Q +AWLP+ + P P QC ET P+ L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN-----PIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQ 398
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIV--YFAATTTLRTVFVK 258
+P + + F+HLVVD+VQ Y V GT S I+ A+ +LR +++
Sbjct: 399 PVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRSLRGCYLE 457
>sp|O54951|SEM6B_MOUSE Semaphorin-6B OS=Mus musculus GN=Sema6b PE=2 SV=1
Length = 886
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G + F + + V+ V
Sbjct: 409 AVPSLGHSPWIVR--TLMRHQLTRVAVDVGAGPWGNQTIVFLGSEAGTVLKFLVKPNASV 466
Query: 266 SNTS---------DSICESSVGRLKQTVTWGQ 288
S T+ ++ GR WGQ
Sbjct: 467 SGTTGPSIFLEEFETYRPDRCGRPSSAGEWGQ 498
>sp|O70141|SEM6B_RAT Semaphorin-6B OS=Rattus norvegicus GN=Sema6b PE=2 SV=1
Length = 887
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 139/272 (51%), Gaps = 20/272 (7%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASNALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G + F + + V+ V
Sbjct: 409 AVPSLGHSPWIVR--TLIRHQLTRVAVDVGAGPWGNQTIVFLGSEVGTVLKFLVKPNASV 466
Query: 266 SNTS---------DSICESSVGRLKQTVTWGQ 288
S T+ ++ GR WGQ
Sbjct: 467 SGTTGPSIFLEEFETYRPDRCGRSSSAGEWGQ 498
>sp|Q9H3T3|SEM6B_HUMAN Semaphorin-6B OS=Homo sapiens GN=SEMA6B PE=1 SV=4
Length = 888
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 11/244 (4%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
AV + P R L H + V G V F + + VR
Sbjct: 408 AVPSLGHAPWILR--TLMRHQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVRPNAST 465
Query: 266 SNTS 269
S TS
Sbjct: 466 SGTS 469
>sp|Q95XP4|SEM2A_CAEEL Semaphorin-2A OS=Caenorhabditis elegans GN=mab-20 PE=1 SV=1
Length = 658
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 122/197 (61%), Gaps = 6/197 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++VFFFFRE A + + V SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 213 EPQFVGSFDVGQHVFFFFREIAHDNSFGERIVHSRVARVCKKDIGGRNVLRQVWTSFVKA 272
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 273 RLNCSVSANFPFYFDHIQSVKRVDKHGETYFYATFSTSETAFTSSAICMFQLSSINHLLD 332
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C ++ ++ D+ L+F ++H L+ ++++
Sbjct: 333 TGLLMEE--TANGQFSVTADEIPAHRPGTCSQNSHSISDTDLHFAKTHLLVSDSIS--GG 388
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD +FTH+VVD
Sbjct: 389 TPILPLRDHVFTHIVVD 405
>sp|Q9C0C4|SEM4C_HUMAN Semaphorin-4C OS=Homo sapiens GN=SEMA4C PE=2 SV=2
Length = 833
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAYVPESVGSFTGDDDKVYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 272 QRKWTTFLKARLACSAP-NWQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAIC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E+I+R F G +KE W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
+LNF++ HPLM+E V R ++P+ ++ FTHLV D V
Sbjct: 390 ILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRV 428
>sp|Q63548|SEM3A_RAT Semaphorin-3A OS=Rattus norvegicus GN=Sema3a PE=2 SV=1
Length = 772
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>sp|O08665|SEM3A_MOUSE Semaphorin-3A OS=Mus musculus GN=Sema3a PE=1 SV=2
Length = 772
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 128/235 (54%), Gaps = 22/235 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
>sp|Q60PR7|SEM2A_CAEBR Semaphorin-2A OS=Caenorhabditis briggsae GN=mab-20 PE=3 SV=1
Length = 656
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 6/197 (3%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++V FFFRE A + + + SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 209 EPQFVGSFDVGQHVLFFFREIAHDNSFGERIIHSRVARVCKKDIGGRNVLRQVWTSFVKA 268
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV-PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 269 RLNCSVSANFPFYFDHIQSVKRVDKHGETFFYATFSTSETAFTSSAICMFQLSSINHLLD 328
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C +++ ++ D+ L+F ++H L+ ++++
Sbjct: 329 TGLLMEE--TANGQFAVTADEIPAHRPGTCSSNSHSISDTDLHFAKTHLLVSDSIS--GG 384
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD ++T ++VD
Sbjct: 385 TPILPLRDHVYTQILVD 401
>sp|Q9W6G6|SEM3D_DANRE Semaphorin-3D OS=Danio rerio GN=sema3d PE=2 SV=1
Length = 764
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 134/242 (55%), Gaps = 21/242 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + KSV SRVAR+C+ D GG L+ W T+LKARL CSIPG
Sbjct: 264 IYFFFREASRDGSTTDKSVLSRVARICRNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 323
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ +P D K YGVFTT+++ GSA+C +++EDI AF G + +
Sbjct: 324 THFDELQDIFLLPSRDEKNPMVYGVFTTTSSIFKGSAVCVYTMEDIRAAFNGPYAHKEGP 383
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T+ PD V++FIR HPLM ++V +P
Sbjct: 384 DHRWVE-YEGRIPYPRPGTCPSRTYDPHIKTTKDFPDEVISFIRLHPLMYQSVHPMTGRP 442
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+F R + T ++VD V E +Y V F T + +V V + Q+ ++ + I
Sbjct: 443 IFTRINTEYRLTQIIVDRVAAE----DGQYAVMFLG-TDMGSVLKVVSITQENWSSEEII 497
Query: 273 CE 274
E
Sbjct: 498 LE 499
>sp|Q64151|SEM4C_MOUSE Semaphorin-4C OS=Mus musculus GN=Sema4c PE=1 SV=1
Length = 834
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 24/219 (10%)
Query: 35 QPDFVGSY----DIGKY------VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FVGS +G + ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 212 EPHFVGSAFVPESVGSFTGDDDKIYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTL 271
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAIC 141
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 272 QKKWTTFLKARLVCSAP-DWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAVC 330
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDS 192
+ +E I++ F G +KE + W + VP PRPG C+N+ + LPD+
Sbjct: 331 EYQLEQIQQVFEGPYKEYSEQAQKWA-RYTDPVPSPRPGSCINNWHRDNGYTSSLELPDN 389
Query: 193 VLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LNFI+ HPLM++ V R +P+ +++ FTH+V D V
Sbjct: 390 TLNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRV 428
>sp|Q14563|SEM3A_HUMAN Semaphorin-3A OS=Homo sapiens GN=SEMA3A PE=2 SV=1
Length = 771
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 128/236 (54%), Gaps = 22/236 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDVS 266
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWYDLE 473
>sp|Q90607|SEM3A_CHICK Semaphorin-3A OS=Gallus gallus GN=SEMA3A PE=1 SV=1
Length = 772
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +++P+
Sbjct: 363 NYQWVP-YQGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINSRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 464
>sp|Q9W7J1|SE3AA_DANRE Semaphorin-3aa OS=Danio rerio GN=sema3aa PE=2 SV=1
Length = 860
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 35 QPDFVGSYDIGK-------YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+G + I + +F FF+E A++ + GK+ SR+ ++CK D GG L
Sbjct: 224 EPRFLGIHLIPESDNPEDDKIFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W T+LKA+L CS+PG +F+E+QD++ + D K Y VFTTS+ GSAIC
Sbjct: 284 WTTFLKAKLTCSVPGLNGIDTHFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICM 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ DI R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 344 YSMADIRRVFLGPYAHRDGPNYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 402
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---T 250
F R HP M V KP+ R ++ FT LVVD V+ E +Y V F T T
Sbjct: 403 FARLHPAMYNPVQPMGGKPIVVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGT 458
Query: 251 TLRTVFVKVRLLQDV 265
L+ V + D+
Sbjct: 459 VLKVVTIPRESWHDL 473
>sp|Q8BH34|SEM3D_MOUSE Semaphorin-3D OS=Mus musculus GN=Sema3d PE=1 SV=1
Length = 777
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 38 FVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
F+G++ I ++FFFRE++ E +S+ SRV RVCK D GG+ L W T
Sbjct: 243 FIGTFPIPDTYNPDDDKIYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTT 302
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKARL CSIPG +F+E+QDIY +P D + YGVFTT+++ GSA+C +S+
Sbjct: 303 FLKARLICSIPGSDGADTHFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSM 362
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G + + ++ W+ R+P PRPG C + T PD V++FI
Sbjct: 363 ADIRAVFNGPYAHKESADHRWVQ-YDGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFI 421
Query: 198 RSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R HP+M ++V P F R D T +VVD V +Y V F T + TV
Sbjct: 422 RRHPVMYKSVYPVAGAPTFKRINVDYRLTQIVVD----HVVAEDGQYDVMFLG-TDIGTV 476
Query: 256 FVKVRLLQDVSNTSDSICES 275
V + ++ N + + E
Sbjct: 477 LKVVSISKEKWNMEEVVLEE 496
>sp|O95025|SEM3D_HUMAN Semaphorin-3D OS=Homo sapiens GN=SEMA3D PE=2 SV=2
Length = 777
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 21/243 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 438
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLG-TDIGTVLKVVSISKEKWNMEEVV 493
Query: 273 CES 275
E
Sbjct: 494 LEE 496
>sp|Q9W686|SE3AB_DANRE Semaphorin-3ab OS=Danio rerio GN=sema3ab PE=2 SV=1
Length = 778
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
++ FFRE A++ K+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFRENAIDGEQISKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P L +RVP PRPG C T+ PD V+ F RSHP M V +N P+
Sbjct: 364 NYQWVPFL-NRVPYPRPGTCPSKTFDGFESTKDFPDDVITFARSHPAMYNPVFPINNHPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IIKTDVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTVLKVVSI 465
>sp|Q17330|SEM1A_CAEEL Semaphorin-1A OS=Caenorhabditis elegans GN=smp-1 PE=2 SV=2
Length = 712
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYI--NCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I N +++RVARVCK D GG ++ W +YLK
Sbjct: 222 PNFVATFAYKEHVYFWFREIASEAIDNNEEPQIYARVARVCKNDKGGARPANERWTSYLK 281
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D ++ Y VF+T + + SA+C FS++ I
Sbjct: 282 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNNHVVYTVFSTPDSDVRMSAVCKFSMKKIR 341
Query: 150 RAF-VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 342 EEFDNGTFKHQNNAQSMWMAFNRNEVPKPRPGSCSPDSTKLPENTVSFILHHPLLHRPI 400
>sp|Q90663|SEM3D_CHICK Semaphorin-3D OS=Gallus gallus GN=SEMA3D PE=2 SV=1
Length = 761
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 123/228 (53%), Gaps = 23/228 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 248 IYFFFREISQDSSTSDKTILSRVGRVCKNDMGGQRSLINKWTTFLKARLVCSIPGPEGAD 307
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ + D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 308 THFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSMADIRAVFNGPYAHKESA 367
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ HPLM ++V P
Sbjct: 368 DHRWVQ-YEGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFIKRHPLMYKSVYPLTGGP 426
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
VF R D T +VVD V E +Y V F T T L+ V +
Sbjct: 427 VFTRINVDYRLTQIVVDHVMAE----DGQYDVIFLGTDIGTVLKAVSI 470
>sp|O15041|SEM3E_HUMAN Semaphorin-3E OS=Homo sapiens GN=SEMA3E PE=2 SV=1
Length = 775
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 139/281 (49%), Gaps = 28/281 (9%)
Query: 18 IKQIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSR 69
+ ++A + H + L +P FVGSY I V+FFF E A+E N ++++R
Sbjct: 206 MGRLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTR 265
Query: 70 VARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---F 124
V R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K
Sbjct: 266 VGRLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVI 325
Query: 125 YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN 184
+G+F T++ G AIC + + I AF G + + W V +VP PRPG C +
Sbjct: 326 FGLFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCAS 384
Query: 185 D--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 385 KVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE 444
Query: 235 VFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICES 275
+Y V F T + V Q++ + + I E
Sbjct: 445 ----DGQYDVLFIGTDNGIVLKVITIYNQEMESMEEVILEE 481
>sp|Q90665|SEM4D_CHICK Semaphorin-4D (Fragment) OS=Gallus gallus GN=SEMA4D PE=2 SV=1
Length = 295
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 18/201 (8%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 4 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 62
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 63 FNIINDVFTLKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 122
Query: 162 -STSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ + LPD L F++ HPLMD++V
Sbjct: 123 QSHTKWV-RYNGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 181
Query: 212 NKPVFYRRDLLFTHLVVDVVQ 232
++P +RD+ +T +VVD V+
Sbjct: 182 DRPRLVKRDVKYTQIVVDRVR 202
>sp|Q13214|SEM3B_HUMAN Semaphorin-3B OS=Homo sapiens GN=SEMA3B PE=2 SV=1
Length = 749
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>sp|Q62177|SEM3B_MOUSE Semaphorin-3B OS=Mus musculus GN=Sema3b PE=2 SV=2
Length = 748
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 241 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 300
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 301 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 361 THQWV-SYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 462
>sp|P70275|SEM3E_MOUSE Semaphorin-3E OS=Mus musculus GN=Sema3e PE=1 SV=3
Length = 775
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 27/239 (11%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPG--EFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C + T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
>sp|O09126|SEM4D_MOUSE Semaphorin-4D OS=Mus musculus GN=Sema4d PE=1 SV=2
Length = 861
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 28/257 (10%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE----------TLPDSVLNFIRSHPLMDEAVAHR 210
S + W+ + VP PRPG C+ D+E LPD L F++ HPLMD++V
Sbjct: 350 QSHTKWV-RYNGPVPTPRPGACI-DSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 407
Query: 211 DNKPVFYRRDLLFTHLVVDVVQ------YEVFGTTSEYIVYFAATTTLRTVFV--KVRLL 262
DN+P ++D+ +T +VVD Q Y+V +++ A + V V + +L
Sbjct: 408 DNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLF 467
Query: 263 QDVSNTSDSICESSVGR 279
+D + S GR
Sbjct: 468 RDSEPVLTLLLSSKKGR 484
>sp|Q13275|SEM3F_HUMAN Semaphorin-3F OS=Homo sapiens GN=SEMA3F PE=2 SV=2
Length = 785
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 28/223 (12%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLF--THLVVDVV-----QYEVF------GTTSEYIV 244
+ R + T + VD V +YEV GT + IV
Sbjct: 453 LVVRTGAPYRLTTIAVDQVDAADGRYEVLFLGTDRGTVQKVIV 495
>sp|O88632|SEM3F_MOUSE Semaphorin-3F OS=Mus musculus GN=Sema3f PE=2 SV=2
Length = 785
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+R+HPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRTHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+ R + V V Q V Y V F T
Sbjct: 453 LVVRTGAPYRLTTVAVDQ--VDAADGRYEVLFLGT 485
>sp|Q9YHX4|SEM4E_DANRE Semaphorin-4E OS=Danio rerio GN=sema4e PE=2 SV=1
Length = 766
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 111/198 (56%), Gaps = 23/198 (11%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFPF 106
++ FF ETAVEY + K SRVARVCK D GG+ L + W ++LKARL+C +P P
Sbjct: 235 IYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVPNTNLPL 294
Query: 107 YFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQ--- 159
+QD++ + DD FY VFT + SA+CS+ IEDI+ F GKFK
Sbjct: 295 L---VQDVFHLCPDDWTTCVFYAVFTPQSDSSQYSAVCSYKIEDIKTVFSKGKFKAPFNV 351
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHR 210
TS W+ + S +P+PRPG C+++ + LPD L F++ PLMD+AV
Sbjct: 352 ETSFVKWV-MYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVTAE 410
Query: 211 DNKPVFYRRDLLFTHLVV 228
+P+ +R FT +VV
Sbjct: 411 --QPLLVKRGAAFTRIVV 426
>sp|Q62178|SEM4A_MOUSE Semaphorin-4A OS=Mus musculus GN=Sema4a PE=1 SV=2
Length = 760
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 15/218 (6%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVA+VCK D GG+ +L + W T+LKA+L
Sbjct: 233 FVAAIPSTQVVYFFFEETASEFDFFEELYISRVAQVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIEDIERAF 152
C+ PG+ P FN I+ +P D ++ Y VFT+ G SA+C+FS+ DIER F
Sbjct: 293 CAQPGQLP--FNIIRHAVLLPADSPSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVF 350
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
GK+KE TS W S V PRPG C + D L F++ H LMDE H
Sbjct: 351 KGKYKELNKETSRWTTYRGSEV-SPRPGSCSMGPSS--DKALTFMKDHFLMDE---HVVG 404
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
P+ + + +T L V+ + +S ++Y +T
Sbjct: 405 TPLLVKSGVEYTRLAVESARG--LDGSSHVVMYLGTST 440
>sp|Q9Z123|SEM4F_MOUSE Semaphorin-4F OS=Mus musculus GN=Sema4f PE=2 SV=2
Length = 777
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D +FFFF ET+ + + RVARVC D GG+ L Q W T+LK
Sbjct: 239 LSPAEWGDEDGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 298
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G ++ ++ PG T FYG+F++ G SA+C+F +DI
Sbjct: 299 ADLLCPGPEHGRASGVLQDMTELRPQPGAGTPLFYGIFSSQWEGAAISAVCAFRPQDIRA 358
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ + + +LPD VL FIR HP
Sbjct: 359 VLNGPFRELKHDCNRGLPVMDNEVPQPRPGECITNNMKFQQFGSSLSLPDRVLTFIRDHP 418
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LMD V D +P+ D + +V V
Sbjct: 419 LMDRPVFPADGRPLLVTTDTAYLRVVAHRV 448
>sp|Q9H3S1|SEM4A_HUMAN Semaphorin-4A OS=Homo sapiens GN=SEMA4A PE=1 SV=2
Length = 761
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 115/220 (52%), Gaps = 19/220 (8%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 233 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTT--STTGLMGSAICSFSIEDIERAF 152
C+ PG+ P FN I+ +P D Y VFT+ G SA+C+FS+ DIER F
Sbjct: 293 CTQPGQLP--FNVIRHAVLLPADSPTAPHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVF 350
Query: 153 VGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
GK+KE TS W + R PE PRPG C + D L F++ H LMDE V
Sbjct: 351 KGKYKELNKETSRW---TTYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMDEQVV-- 403
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
P+ + + +T L V+ Q S ++Y TT
Sbjct: 404 -GTPLLVKSGVEYTRLAVETAQG--LDGHSHLVMYLGTTT 440
>sp|Q9Z143|SEM4F_RAT Semaphorin-4F OS=Rattus norvegicus GN=Sema4f PE=2 SV=1
Length = 776
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 105/210 (50%), Gaps = 12/210 (5%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D +FFFF ET+ + + RVARVC D GG+ L Q W T+LK
Sbjct: 238 LSPAEWGDEDGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 297
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G + ++ PG T FYG+F++ G SA+C+F +DI
Sbjct: 298 ADLLCPGPEHGRASGVLQAMAELRPQPGAGTPIFYGIFSSQWEGAAISAVCAFRPQDIRA 357
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ + + +LPD VL FIR HP
Sbjct: 358 VLNGPFRELKHDCNRGLPVMDNEVPQPRPGECIANNMKLQQFGSSLSLPDRVLTFIRDHP 417
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVV 231
LMD V D +P+ D + +V V
Sbjct: 418 LMDRPVFPADGRPLLVTTDTAYLRVVAHRV 447
>sp|Q9NPR2|SEM4B_HUMAN Semaphorin-4B OS=Homo sapiens GN=SEMA4B PE=1 SV=3
Length = 832
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 22/181 (12%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF ET E+ ++ SR+AR+CK D GG+ +L Q W ++LKA+L CS P + F
Sbjct: 255 IYFFFSETGQEFEFFENTIVSRIARICKGDEGGERVLQQRWTSFLKAQLLCSRPDDG-FP 313
Query: 108 FNEIQDIYKV---PGD--DTKFYGVFTT----STTGLMGSAICSFSIEDIERAFVGKFKE 158
FN +QD++ + P D DT FYGVFT+ TT GSA+C F+++D++R F G +KE
Sbjct: 314 FNVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRGTT--EGSAVCVFTMKDVQRVFSGLYKE 371
Query: 159 QATSTSAWLPVLSSRVPEPRPGQC---------VNDTETLPDSVLNFIRSHPLMDEAVAH 209
T W V + VP PRPG C +N + LPD VLNF++ H LMD V
Sbjct: 372 VNRETQQWYTV-THPVPTPRPGACITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRS 430
Query: 210 R 210
R
Sbjct: 431 R 431
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,108,194
Number of Sequences: 539616
Number of extensions: 5666019
Number of successful extensions: 11643
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 11277
Number of HSP's gapped (non-prelim): 193
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)