Query psy10772
Match_columns 378
No_of_seqs 216 out of 639
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:07:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olz_A Semaphorin 4D; developm 100.0 1.6E-77 5.6E-82 636.1 29.6 353 8-376 150-636 (663)
2 3nvq_A Semaphorin-7A; beta-pro 100.0 1.9E-73 6.6E-78 593.6 30.4 326 8-364 141-586 (590)
3 3oky_B Putative uncharacterize 100.0 7.7E-71 2.6E-75 571.1 24.1 246 8-257 165-435 (565)
4 1q47_A Semaphorin 3A; beta pro 100.0 3E-65 1E-69 526.1 24.7 245 8-257 159-436 (495)
5 4gz8_A Semaphorin-3A; multi-do 100.0 1.6E-62 5.5E-67 519.4 26.8 331 8-376 167-533 (667)
6 3nvx_A Protein A39; beta-prope 100.0 1.5E-58 5.2E-63 454.0 16.2 223 8-258 106-345 (383)
7 3al9_A Plexin-A2; beta-propell 100.0 3.5E-49 1.2E-53 410.4 22.6 194 35-257 210-428 (539)
8 3ol2_B Plexin-B1; beta-propell 100.0 1.3E-48 4.3E-53 403.8 20.4 216 7-258 147-416 (528)
9 3oky_A Plexin-A2; transmembran 100.0 3.1E-48 1.1E-52 411.2 21.8 223 6-257 147-427 (681)
10 4fww_A Macrophage-stimulating 100.0 4.3E-47 1.5E-51 394.3 18.5 231 8-258 154-434 (527)
11 2uzx_B Hepatocyte growth facto 100.0 1.4E-45 4.7E-50 395.4 16.1 196 34-257 224-444 (727)
12 3nvn_B Plexin-C1; beta-propell 100.0 6.2E-33 2.1E-37 279.5 19.8 195 7-258 138-369 (476)
13 2lu7_A Obscurin-like protein 1 99.0 3.9E-10 1.3E-14 88.1 7.7 76 280-367 4-83 (84)
14 1waa_A Titin; metal binding pr 99.0 7.5E-10 2.6E-14 87.8 8.4 77 279-367 12-92 (93)
15 2lvc_A Obscurin-like protein 1 99.0 6.8E-10 2.3E-14 88.1 6.6 72 282-365 16-91 (91)
16 3knb_A Titin; IG-like, titin, 99.0 8.5E-10 2.9E-14 88.5 7.1 81 279-367 12-99 (100)
17 3knb_B Obscurin-like protein 1 99.0 7.6E-10 2.6E-14 90.1 6.5 79 279-367 20-105 (107)
18 2eny_A Obscurin; beta-sandwich 98.9 2.1E-09 7.1E-14 86.6 7.3 86 278-373 14-103 (104)
19 2yuz_A Myosin-binding protein 98.9 4.2E-09 1.4E-13 84.4 7.6 79 278-368 13-96 (100)
20 2k1m_A Myosin-binding protein 98.9 7.2E-09 2.5E-13 81.3 8.3 76 279-366 15-94 (95)
21 2kdg_A Myotilin; immonoglobuli 98.8 7.1E-09 2.4E-13 81.3 8.0 82 279-368 12-99 (100)
22 2dlt_A Myosin binding protein 98.8 4.6E-09 1.6E-13 84.0 6.4 86 279-375 15-105 (106)
23 2dav_A SLOW MYBP-C, myosin-bin 98.8 1E-08 3.4E-13 86.8 8.4 96 279-374 14-118 (126)
24 2edn_A Myosin-binding protein 98.8 9.1E-09 3.1E-13 86.1 7.9 90 279-368 19-117 (118)
25 3qp3_A Titin; I-SET IG-like, s 98.8 8.1E-09 2.8E-13 81.6 7.2 80 279-368 15-101 (103)
26 2e6q_A Obscurin-like protein 1 98.8 1.8E-08 6.3E-13 83.3 9.5 79 278-368 14-106 (112)
27 2cqv_A MLCK, myosin light chai 98.8 1.9E-08 6.4E-13 81.3 9.1 81 279-369 14-101 (114)
28 2edf_A Obscurin; beta-sandwich 98.8 1.2E-08 4.3E-13 80.8 7.8 79 279-369 15-97 (103)
29 2yuv_A Myosin-binding protein 98.8 2.4E-08 8E-13 79.0 9.2 75 282-368 18-96 (100)
30 1g1c_A Immunoglobulin-like dom 98.8 1.2E-08 4.1E-13 79.8 7.2 79 279-367 12-98 (99)
31 1x44_A Myosin-binding protein 98.8 2.8E-08 9.6E-13 78.9 9.1 79 279-369 14-98 (103)
32 2edj_A Roundabout homolog 2; K 98.8 1.9E-08 6.6E-13 79.1 8.0 80 279-367 15-98 (100)
33 2bk8_A Connectin, M1, titin he 98.8 2E-08 6.9E-13 78.6 8.1 80 279-368 8-95 (97)
34 3irg_B Obscurin-like protein 1 98.8 1.1E-08 3.7E-13 81.3 6.5 79 279-367 20-105 (107)
35 1u2h_A APEG-1, aortic preferen 98.8 1.4E-08 4.7E-13 79.5 6.9 80 279-367 12-98 (99)
36 3puc_A Titin; I-SET IG-like do 98.8 1.6E-08 5.5E-13 79.0 7.2 78 279-366 13-97 (99)
37 2eo1_A OBSCN protein, cDNA FLJ 98.7 1.7E-08 5.9E-13 79.8 7.1 78 279-368 18-99 (102)
38 2e6p_A Obscurin-like protein 1 98.7 2.4E-08 8.2E-13 79.2 7.9 76 282-369 20-99 (104)
39 4hwu_A Fibroblast growth facto 98.7 2.9E-08 9.8E-13 77.6 8.2 78 279-368 8-88 (95)
40 2dm3_A KIAA0992 protein, palla 98.7 7.9E-09 2.7E-13 82.6 5.0 84 279-370 16-105 (110)
41 2edh_A Obscurin; structural ge 98.7 3.1E-08 1.1E-12 79.9 8.5 77 279-368 26-106 (113)
42 1pd6_A Cardiac MYBP-C;, myosin 98.7 2.8E-08 9.6E-13 80.1 8.1 75 281-367 25-104 (104)
43 2ckn_A Basic fibroblast growth 98.7 2.3E-08 7.8E-13 78.4 7.1 77 278-365 15-94 (95)
44 1gxe_A Myosin binding protein 98.7 2.6E-08 9E-13 85.2 8.0 84 279-366 25-138 (139)
45 2e7c_A Myosin-binding protein 98.7 3.4E-08 1.2E-12 80.4 8.4 79 279-367 31-115 (118)
46 2e7b_A Obscurin; IG-like domai 98.7 2.3E-08 8E-13 79.2 7.2 79 278-368 14-96 (103)
47 3cx2_A Myosin-binding protein 98.7 3.6E-08 1.2E-12 79.3 8.1 89 279-367 11-108 (108)
48 2cpc_A KIAA0657 protein; immun 98.7 7.6E-08 2.6E-12 77.3 10.0 77 281-369 22-102 (113)
49 2cr6_A KIAA1556 protein, obscu 98.7 4.3E-08 1.5E-12 79.7 8.3 81 279-370 20-105 (115)
50 2dku_A KIAA1556 protein; beta- 98.7 6.2E-08 2.1E-12 76.7 8.9 80 278-369 14-97 (103)
51 2edk_A Myosin-binding protein 98.7 1.8E-08 6.2E-13 79.8 5.7 78 279-368 15-100 (101)
52 2cr3_A Basic fibroblast growth 98.7 2.8E-08 9.6E-13 78.6 6.5 79 279-368 10-91 (99)
53 2eo9_A Roundabout homolog 1; b 98.7 4.1E-08 1.4E-12 79.8 7.6 81 279-368 15-99 (118)
54 2dm2_A Palladin; beta-sandwich 98.7 3.4E-08 1.2E-12 79.2 6.9 82 279-369 15-104 (110)
55 3kvq_A Vascular endothelial gr 98.7 4.5E-08 1.6E-12 77.7 7.6 80 279-368 17-101 (108)
56 2kkq_A Myotilin; unknown funct 98.7 6.9E-08 2.4E-12 78.9 8.9 82 279-369 22-111 (116)
57 2yr3_A Myosin light chain kina 98.7 3.5E-08 1.2E-12 77.4 6.6 77 279-365 18-98 (99)
58 1wit_A Twitchin 18TH IGSF modu 98.7 3.7E-08 1.3E-12 76.6 6.5 77 279-365 9-92 (93)
59 3irg_A Titin; IG-like, titin, 98.6 4.9E-08 1.7E-12 76.0 7.1 80 279-366 12-98 (100)
60 2dm7_A KIAA1556 protein; beta- 98.6 8.3E-08 2.8E-12 76.6 7.3 77 279-368 15-95 (108)
61 1gl4_B Basement membrane-speci 98.6 1.9E-07 6.4E-12 73.2 9.0 77 279-366 17-97 (98)
62 1nct_A Titin; cell adhesion, g 98.6 4E-08 1.4E-12 79.0 5.2 78 279-366 21-105 (106)
63 1fhg_A Telokin; immunoglobulin 98.6 1.1E-07 3.7E-12 81.4 7.6 82 280-371 49-138 (154)
64 3caf_A Fibroblast growth facto 98.6 8.5E-08 2.9E-12 75.2 6.1 79 279-365 15-99 (100)
65 3rbs_A Myomesin-1; immunoglobu 98.5 7.6E-08 2.6E-12 86.7 6.3 76 282-367 126-207 (207)
66 1wwb_X Protein (brain derived 98.5 2.3E-07 7.8E-12 74.2 8.0 74 285-368 14-99 (103)
67 1he7_A High affinity nerve gro 98.5 2.7E-07 9.3E-12 77.9 7.1 74 286-369 14-101 (126)
68 3kld_A Contactin 4, axcam, BIG 98.4 5.8E-07 2E-11 87.4 9.9 121 225-367 259-383 (384)
69 3m45_A Cell adhesion molecule 98.4 8.7E-07 3E-11 69.7 9.2 86 279-367 13-106 (108)
70 2cry_A KIN of IRRE-like protei 98.4 6E-08 2E-12 79.4 2.3 88 280-375 21-121 (122)
71 3rbg_A Cytotoxic and regulator 98.4 6.9E-07 2.4E-11 73.5 8.6 90 279-375 8-113 (124)
72 3s35_X Vascular endothelial gr 98.4 7.3E-07 2.5E-11 72.5 8.1 91 280-371 16-114 (122)
73 3s97_C Contactin-1; carbonic a 98.4 1.3E-06 4.5E-11 75.4 9.5 76 281-366 122-200 (201)
74 2j8h_A Titin, connectin; cardi 98.4 2.8E-06 9.5E-11 73.6 11.3 125 225-366 63-196 (197)
75 3bfo_A Mucosa-associated lymph 98.3 6.3E-07 2.2E-11 69.3 5.8 74 279-367 10-87 (91)
76 2r15_A Myomesin-1; sarcomeric 98.3 1.2E-06 4.2E-11 76.7 8.2 78 280-367 125-210 (212)
77 2ens_A Advanced glycosylation 98.3 7.7E-07 2.6E-11 69.5 5.8 61 280-355 18-78 (96)
78 1jhl_L IGG1-kappa D11.15 FV (l 98.3 3.2E-06 1.1E-10 67.6 9.5 75 279-356 8-93 (108)
79 4gjt_B Poliovirus receptor-rel 98.3 2E-06 6.7E-11 70.9 8.5 90 280-369 8-119 (123)
80 4fa8_A Secreted protein BARF1; 98.3 9.7E-07 3.3E-11 79.5 6.8 119 225-361 70-196 (203)
81 2oyp_A Hepatitis A virus cellu 98.3 4.1E-06 1.4E-10 66.1 9.7 75 280-355 2-93 (109)
82 4fa8_A Secreted protein BARF1; 98.3 2.1E-06 7.2E-11 77.2 9.0 87 281-367 2-105 (203)
83 3lcy_A Titin; A-BAND, IG tande 98.3 2.2E-06 7.5E-11 73.8 8.7 83 279-371 14-103 (197)
84 3rbs_A Myomesin-1; immunoglobu 98.3 6.5E-07 2.2E-11 80.5 5.4 68 279-355 9-82 (207)
85 2v44_A NCAM2, neural cell adhe 98.3 1.7E-06 5.9E-11 74.6 7.9 113 225-355 59-172 (189)
86 3r08_E T-cell surface glycopro 98.3 4.9E-07 1.7E-11 70.7 3.7 74 279-370 6-80 (82)
87 1zox_A CLM-1; IG-superfamily, 98.3 4.2E-06 1.5E-10 67.3 9.5 88 278-367 7-110 (113)
88 2rik_A Titin; I-SET IG fold, p 98.3 5.3E-06 1.8E-10 76.0 11.2 78 280-367 200-284 (284)
89 3khq_A B-cell antigen receptor 98.2 2.8E-06 9.6E-11 71.5 8.5 84 279-368 24-118 (133)
90 1xt5_A Variable region-contain 98.2 4.4E-06 1.5E-10 68.9 9.4 89 279-367 11-133 (135)
91 1hng_A CD2; T lymphocyte adhes 98.2 1.7E-06 5.9E-11 75.3 7.1 87 280-367 4-99 (176)
92 3lcy_A Titin; A-BAND, IG tande 98.2 7.4E-06 2.5E-10 70.4 11.0 124 225-367 64-196 (197)
93 2a38_A Titin; Z1Z2, structural 98.2 2E-06 6.8E-11 74.2 6.9 76 280-365 111-193 (194)
94 2yd1_A Tyrosine-protein phosph 98.2 7.5E-06 2.6E-10 72.2 10.8 80 280-368 118-201 (212)
95 1epf_A NCAM, protein (neural c 98.2 1.4E-06 4.6E-11 75.2 5.4 78 280-365 108-189 (191)
96 1h5b_A Murine T cell receptor 98.2 4.8E-06 1.6E-10 67.2 8.3 73 279-355 8-92 (113)
97 3qr2_A Basigin; CD147, EMMPRIN 98.2 1E-06 3.4E-11 73.5 4.4 74 279-355 28-111 (137)
98 2y25_A Myomesin; structural pr 98.2 4.5E-06 1.5E-10 77.5 9.2 78 280-367 230-315 (317)
99 2v9t_A Roundabout homolog 1; s 98.2 1.3E-06 4.5E-11 70.5 4.8 69 279-355 16-93 (117)
100 1hnf_A CD2; T lymphocyte adhes 98.2 3.4E-06 1.2E-10 74.6 7.7 83 279-367 6-104 (182)
101 2va4_A NCAM2, N-CAM 2, neural 98.2 2.6E-06 9E-11 73.1 6.8 78 279-366 11-93 (192)
102 1eaj_A Coxsackie virus and ade 98.2 4.4E-06 1.5E-10 67.0 7.7 88 279-366 12-124 (126)
103 3nl4_L Antigen binding fragmen 98.2 1E-05 3.5E-10 71.1 10.8 74 279-355 8-92 (213)
104 1z9m_A GAPA225; nectin-like, I 98.2 5E-06 1.7E-10 70.1 8.1 84 278-367 44-138 (145)
105 3mtr_A N-CAM-1, NCAM-1, neural 98.2 3.5E-06 1.2E-10 74.7 7.4 80 280-367 26-112 (215)
106 2j8h_A Titin, connectin; cardi 98.2 3.6E-06 1.2E-10 72.9 7.3 83 279-370 11-101 (197)
107 1f97_A Junction adhesion molec 98.2 7.8E-06 2.7E-10 71.1 9.5 88 278-368 7-104 (212)
108 3jz7_A MCAR, CAR, coxsackievir 98.1 4.6E-06 1.6E-10 72.6 8.0 75 284-366 133-211 (214)
109 2wv3_A Neuroplastin; igcam, me 98.1 9.5E-06 3.2E-10 70.2 9.8 81 280-366 100-189 (190)
110 2q20_A VK1 O18/O8 germline lig 98.1 8.4E-06 2.9E-10 65.4 8.8 74 279-355 10-94 (109)
111 3b5h_A Cervical EMMPRIN, HAB18 98.1 4.8E-06 1.7E-10 71.5 7.8 85 280-367 91-183 (184)
112 1wwc_A Protein (NT-3 growth fa 98.1 4.3E-06 1.5E-10 67.7 7.0 72 288-369 21-103 (118)
113 3ojm_B Fibroblast growth facto 98.1 3.6E-06 1.2E-10 74.3 7.0 82 278-369 25-114 (231)
114 2v44_A NCAM2, neural cell adhe 98.1 5.3E-06 1.8E-10 71.4 7.9 81 278-369 8-97 (189)
115 2qsq_A Carcinoembryonic antige 98.1 5.8E-06 2E-10 67.7 7.6 86 279-367 7-109 (111)
116 1rhf_A Tyrosine-protein kinase 98.1 6.3E-06 2.1E-10 70.5 8.1 80 279-368 9-98 (182)
117 1cs6_A Axonin-1; neural cell a 98.1 3.8E-06 1.3E-10 80.6 7.4 76 281-366 303-381 (382)
118 3so5_A LIG-3, leucine-rich rep 98.1 2E-06 6.8E-11 67.5 4.4 74 279-355 17-97 (112)
119 1qfw_M FV, antibody (anti beta 98.1 8.6E-06 2.9E-10 65.3 8.2 73 280-355 9-92 (108)
120 1i8k_A Epidermal growth factor 98.1 8.4E-06 2.9E-10 65.2 8.1 73 280-355 9-92 (107)
121 1pko_A Myelin oligodendrocyte 98.1 1.3E-05 4.4E-10 66.8 9.5 86 279-367 13-121 (139)
122 2iep_A Muscle-specific kinase 98.1 3.6E-06 1.2E-10 72.4 6.0 77 281-367 109-190 (192)
123 3s96_B 3B5H10 FAB light chain; 98.1 1.4E-05 4.7E-10 70.4 9.9 91 281-373 9-122 (218)
124 1bih_A Hemolin; insect immunit 98.1 5.8E-06 2E-10 79.4 8.0 73 282-365 319-394 (395)
125 2v5t_A NCAM2, N-CAM 2, neural 98.1 4E-06 1.4E-10 71.8 6.1 76 281-366 107-187 (189)
126 2v5t_A NCAM2, N-CAM 2, neural 98.1 5.7E-06 1.9E-10 70.8 7.0 68 280-355 10-78 (189)
127 2or8_A Hepatitis A virus cellu 98.1 2.1E-05 7.3E-10 63.0 10.0 87 278-366 3-110 (116)
128 4gos_A V-SET domain-containing 98.1 6.9E-06 2.4E-10 68.2 7.2 90 278-367 11-120 (125)
129 2e27_L Anti-ciguatoxin antibod 98.1 1.4E-05 4.7E-10 65.7 8.9 74 279-355 10-94 (119)
130 2a38_A Titin; Z1Z2, structural 98.1 7.4E-06 2.5E-10 70.5 7.6 80 279-366 12-98 (194)
131 1mqk_L Antibody 7E2 FV fragmen 98.1 1.3E-05 4.4E-10 65.9 8.7 75 279-356 8-93 (120)
132 2iep_A Muscle-specific kinase 98.1 6.7E-06 2.3E-10 70.7 7.2 80 279-367 14-99 (192)
133 2fbo_J V1V2;, variable region- 98.1 8.4E-06 2.9E-10 73.1 8.1 90 279-368 9-132 (250)
134 2y23_A Myomesin; structural pr 98.1 5.7E-06 2E-10 76.6 7.2 75 282-366 231-311 (312)
135 4dep_C Interleukin-1 receptor 98.1 9.6E-06 3.3E-10 76.9 8.8 89 279-368 14-116 (349)
136 4fqp_A Poliovirus receptor; im 98.1 9.3E-06 3.2E-10 76.1 8.5 75 282-368 227-305 (313)
137 2yd6_A PTPRD protein; hydrolas 98.0 9.5E-06 3.2E-10 71.7 8.0 81 279-369 13-102 (212)
138 2xot_A Amphoterin-induced prot 98.0 9.1E-06 3.1E-10 79.0 8.6 88 271-367 246-337 (361)
139 2v9r_A Roundabout homolog 1; p 98.0 5.6E-06 1.9E-10 72.2 6.4 83 280-371 119-206 (212)
140 2ny1_B T-cell surface glycopro 98.0 1.7E-05 5.8E-10 68.3 9.2 81 280-367 3-100 (184)
141 2yd1_A Tyrosine-protein phosph 98.0 1.3E-05 4.3E-10 70.8 8.6 82 279-369 13-104 (212)
142 3udw_C Poliovirus receptor; PV 98.0 1.3E-05 4.5E-10 63.7 7.8 87 281-367 9-116 (118)
143 1ry7_B FGFR-3, fibroblast grow 98.0 2.6E-05 8.9E-10 73.3 11.1 129 225-368 181-328 (334)
144 3bp6_B Programmed cell death 1 98.0 1.1E-05 3.7E-10 70.5 7.9 84 279-368 9-104 (202)
145 3grw_A Fibroblast growth facto 98.0 1.1E-05 3.6E-10 72.1 8.0 82 278-367 21-108 (241)
146 3grw_A Fibroblast growth facto 98.0 2.2E-05 7.4E-10 70.1 10.0 84 280-372 122-223 (241)
147 1qz1_A Neural cell adhesion mo 98.0 5.8E-06 2E-10 75.9 6.2 80 280-367 204-290 (291)
148 1neu_A Myelin P0 protein; stru 98.0 3.3E-05 1.1E-09 62.4 10.1 89 279-367 6-119 (124)
149 2if7_A SLAM family member 6; N 98.0 1.7E-05 5.9E-10 69.7 9.0 88 278-367 4-106 (193)
150 2id5_A Lingo-1, leucine rich r 98.0 7E-06 2.4E-10 82.2 7.1 80 279-366 392-476 (477)
151 2jll_A NCAM2, neural cell adhe 98.0 1.5E-05 5.2E-10 76.4 9.2 83 279-369 7-101 (389)
152 2ywz_A NEW antigen receptor va 98.0 1.2E-05 4.2E-10 64.8 7.3 75 279-355 7-87 (111)
153 1j05_L T84.66 antibody, anti-C 98.0 1.3E-05 4.4E-10 64.4 7.3 76 280-355 9-96 (111)
154 2r15_A Myomesin-1; sarcomeric 98.0 5.8E-06 2E-10 72.3 5.6 74 284-366 14-94 (212)
155 3qs7_E FL cytokine receptor; i 98.0 1.7E-05 5.9E-10 79.0 9.6 85 281-368 236-324 (423)
156 1qz1_A Neural cell adhesion mo 98.0 3.5E-05 1.2E-09 70.6 11.1 122 225-366 63-192 (291)
157 2ny1_B T-cell surface glycopro 98.0 1.3E-05 4.3E-10 69.1 7.6 70 283-368 108-180 (184)
158 2x1w_L Vascular endothelial gr 98.0 1.2E-05 4.2E-10 71.4 7.7 77 279-366 14-100 (213)
159 2c5d_C AXL oncogene, tyrosine- 98.0 9.7E-06 3.3E-10 70.3 6.8 82 279-368 9-106 (195)
160 3mj6_A Junctional adhesion mol 98.0 1.9E-05 6.4E-10 71.9 9.0 126 226-365 86-235 (268)
161 2wim_A N-CAM 2, NCAM2, neural 98.0 7.8E-06 2.7E-10 75.0 6.5 77 281-367 203-284 (291)
162 3ojm_B Fibroblast growth facto 98.0 4.6E-05 1.6E-09 67.1 11.2 87 279-369 125-223 (231)
163 3b43_A Titin; I-SET IG fold, e 98.0 1.2E-05 4E-10 82.6 8.3 79 280-368 392-477 (570)
164 2yd9_A Receptor-type tyrosine- 98.0 1.8E-05 6E-10 73.7 8.7 83 279-371 13-104 (304)
165 2yd6_A PTPRD protein; hydrolas 98.0 3.3E-05 1.1E-09 68.2 10.1 68 280-355 116-188 (212)
166 2rik_A Titin; I-SET IG fold, p 98.0 1.4E-05 4.6E-10 73.3 7.7 81 279-369 12-99 (284)
167 3juy_B 3B3 single chain varian 98.0 2E-05 6.9E-10 71.9 8.7 78 278-356 12-107 (256)
168 2va4_A NCAM2, N-CAM 2, neural 98.0 2.4E-05 8.3E-10 67.0 8.8 79 282-366 104-192 (192)
169 1moe_A Anti-CEA MAB T84.66; an 98.0 2.8E-05 9.5E-10 69.8 9.4 90 279-368 8-113 (240)
170 1q0x_L FAB 9B1, light chain; a 98.0 2.8E-05 9.5E-10 68.4 9.3 87 280-366 8-109 (212)
171 1oaq_L Light chain; antibody, 97.9 2.7E-05 9.2E-10 63.6 8.4 93 281-373 9-116 (120)
172 3jz7_A MCAR, CAR, coxsackievir 97.9 3.7E-05 1.3E-09 66.7 9.8 90 279-368 7-121 (214)
173 1i3g_L Antibody FV fragment; a 97.9 2.3E-05 7.8E-10 63.1 7.8 74 279-355 11-95 (111)
174 1sq2_N Novel antigen receptor; 97.9 2.3E-05 8E-10 63.5 7.8 75 279-355 7-87 (113)
175 2x1w_L Vascular endothelial gr 97.9 2.7E-05 9.4E-10 69.1 8.8 88 280-368 113-208 (213)
176 1jbj_A CD3 epsilon and gamma e 97.9 1.5E-05 5.1E-10 69.8 6.9 59 284-358 119-177 (186)
177 2wv3_A Neuroplastin; igcam, me 97.9 7.2E-06 2.5E-10 70.9 4.8 77 282-367 12-91 (190)
178 1fo0_B Protein (BM3.3 T cell r 97.9 3.2E-05 1.1E-09 62.6 8.4 73 280-355 9-95 (112)
179 2y23_A Myomesin; structural pr 97.9 1.5E-05 5E-10 73.8 7.2 79 279-366 8-92 (312)
180 1itb_B Type 1 interleukin-1 re 97.9 2.8E-06 9.4E-11 79.4 2.1 80 271-355 4-83 (315)
181 3mjg_X Beta-type platelet-deri 97.9 2.1E-05 7.2E-10 72.3 8.1 85 281-369 190-280 (289)
182 2fbo_J V1V2;, variable region- 97.9 1.5E-05 5.1E-10 71.5 6.9 74 279-355 143-234 (250)
183 1nbq_A JAM, junctional adhesio 97.9 1.7E-05 5.8E-10 68.8 7.0 89 278-369 10-108 (209)
184 1eeq_A Kappa-4 immunoglobulin 97.9 3.1E-05 1E-09 62.6 8.1 77 279-355 8-98 (114)
185 1ccz_A Protein (CD58); LFA-3, 97.9 3.3E-05 1.1E-09 67.1 8.8 85 280-368 3-95 (171)
186 2nzi_A Titin; IG-domain, FNIII 97.9 1.5E-05 5.2E-10 73.8 7.1 82 279-369 11-100 (305)
187 3oq3_B IFN-alpha/beta binding 97.9 1.4E-05 4.9E-10 75.7 7.0 125 226-368 91-225 (329)
188 3sob_L Antibody light chain; b 97.9 4.6E-05 1.6E-09 67.8 10.0 86 279-367 31-131 (237)
189 1dlf_L Anti-dansyl immunoglobu 97.9 3.8E-05 1.3E-09 61.9 8.6 76 280-355 9-97 (113)
190 4f80_A Butyrophilin subfamily 97.9 2.6E-05 8.9E-10 69.5 8.3 76 279-355 11-104 (226)
191 3mj8_L Stimulatory hamster ant 97.9 4.7E-05 1.6E-09 66.8 9.8 84 281-367 9-109 (213)
192 3o4o_C Interleukin-1 receptor 97.9 1.2E-05 4.1E-10 75.9 6.3 95 271-368 16-118 (339)
193 3p3y_A Neurofascin; IG domains 97.9 1.5E-05 5.1E-10 76.6 6.9 123 225-367 276-403 (404)
194 2ptt_A CD48 antigen; CD244, CD 97.9 3.3E-05 1.1E-09 61.7 7.9 87 279-367 10-108 (110)
195 3r06_A Anti-mouse CD3epsilon a 97.9 3E-05 1E-09 68.1 8.3 84 279-365 8-106 (213)
196 3r4d_A CEA-related cell adhesi 97.9 1.1E-05 3.6E-10 70.5 5.2 61 284-355 122-184 (208)
197 1lk3_L 9D7 light chain; antige 97.9 3.5E-05 1.2E-09 67.8 8.6 86 279-367 7-107 (210)
198 1svz_A Immunoglobulin;, single 97.9 4E-05 1.4E-09 69.3 9.2 90 279-368 8-114 (247)
199 3d9a_L Light chain of hyhel10 97.9 2.9E-05 9.9E-10 68.2 8.0 75 279-356 8-93 (213)
200 3laf_A Deleted in colorectal c 97.9 1.4E-05 4.7E-10 77.0 6.4 78 280-367 320-401 (403)
201 3qs7_E FL cytokine receptor; i 97.9 2.1E-05 7.3E-10 78.3 7.9 81 279-366 55-138 (423)
202 3moq_A NEW antigen receptor va 97.9 3E-05 1E-09 64.8 7.6 75 279-355 7-87 (126)
203 2coq_A NEW antigen receptor va 97.9 2E-05 7E-10 63.1 6.3 75 279-355 7-87 (108)
204 1ncn_A T lymphocyte activation 97.9 5.3E-05 1.8E-09 60.3 8.8 75 281-355 3-90 (110)
205 1sy6_A T-cell surface glycopro 97.9 8.2E-06 2.8E-10 72.8 4.3 61 285-355 126-188 (204)
206 3bj9_1 Immunoglobulin IOTA cha 97.9 5.7E-05 1.9E-09 61.0 9.0 75 281-355 7-98 (116)
207 3zyj_A Leucine-rich repeat-con 97.9 2.6E-05 8.9E-10 77.6 8.3 83 279-369 348-435 (440)
208 3s97_C Contactin-1; carbonic a 97.9 1.2E-05 4.2E-10 69.2 5.2 70 279-355 15-87 (201)
209 4frw_A Poliovirus receptor-rel 97.9 3.4E-05 1.1E-09 66.7 8.0 76 280-355 7-100 (218)
210 4dzb_B Vbeta2 (MAIT T cell rec 97.9 4.4E-05 1.5E-09 68.8 9.1 74 279-355 8-98 (246)
211 1itb_B Type 1 interleukin-1 re 97.9 3.5E-05 1.2E-09 71.7 8.7 130 225-367 163-314 (315)
212 2pet_A Lutheran blood group gl 97.9 2.9E-05 9.9E-10 68.7 7.7 88 279-368 7-115 (231)
213 2wim_A N-CAM 2, NCAM2, neural 97.9 3.2E-05 1.1E-09 70.9 8.2 80 278-368 10-98 (291)
214 3to4_D NKT vbeta2 (mouse varia 97.9 6.8E-05 2.3E-09 68.4 10.3 74 279-355 8-95 (253)
215 3q0h_A T cell immunoreceptor w 97.9 4.1E-05 1.4E-09 62.5 7.9 89 279-368 10-109 (117)
216 4dep_C Interleukin-1 receptor 97.9 8.3E-05 2.8E-09 70.4 11.2 125 226-367 81-217 (349)
217 3zyi_A Leucine-rich repeat-con 97.9 1.7E-05 5.7E-10 79.3 6.7 84 279-371 359-447 (452)
218 2dru_A Chimera of CD48 antigen 97.9 5.5E-05 1.9E-09 66.2 9.2 87 279-367 6-104 (180)
219 1jbj_A CD3 epsilon and gamma e 97.9 3E-05 1E-09 67.8 7.4 67 282-365 9-79 (186)
220 2znx_A SCFV; fluorotryptohpan, 97.8 4.1E-05 1.4E-09 69.4 8.6 86 279-367 8-108 (242)
221 1tvd_A T cell receptor, ES204 97.8 5.6E-05 1.9E-09 61.1 8.6 75 279-355 7-97 (116)
222 3tv3_L PGT128 light chain, IG 97.8 6.2E-05 2.1E-09 66.1 9.5 83 281-368 9-107 (211)
223 2edo_A CD48 antigen; beta-sand 97.8 2E-05 6.9E-10 64.9 5.9 88 279-368 11-111 (121)
224 3esu_F Antibody 14B7* light ch 97.8 4.5E-05 1.5E-09 68.9 8.8 74 279-355 11-95 (250)
225 4f80_A Butyrophilin subfamily 97.8 8.3E-05 2.8E-09 66.2 10.4 123 225-367 84-213 (226)
226 3mj6_A Junctional adhesion mol 97.8 4E-05 1.4E-09 69.6 8.4 78 278-355 11-105 (268)
227 2y25_A Myomesin; structural pr 97.8 2.1E-05 7.1E-10 73.0 6.5 78 280-366 14-96 (317)
228 3nfj_J T cell receptor beta ch 97.8 3.8E-05 1.3E-09 69.3 8.0 74 279-355 8-95 (245)
229 2jll_A NCAM2, neural cell adhe 97.8 0.00012 4E-09 70.2 11.8 123 224-366 63-193 (389)
230 2d9c_A Signal-regulatory prote 97.8 6.4E-05 2.2E-09 62.5 8.7 88 279-369 15-123 (136)
231 3b43_A Titin; I-SET IG fold, e 97.8 2.9E-05 1E-09 79.6 7.9 79 279-367 12-97 (570)
232 1epf_A NCAM, protein (neural c 97.8 4.1E-05 1.4E-09 65.7 7.7 81 279-367 9-99 (191)
233 3sgj_C Human FCG3A receptor; r 97.8 2.5E-05 8.6E-10 69.5 6.5 75 282-369 98-176 (204)
234 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.8 0.00012 4E-09 67.0 11.1 92 279-374 144-255 (256)
235 2yc1_B Single chain antibody f 97.8 5.4E-05 1.8E-09 65.0 8.3 74 279-355 23-107 (146)
236 1fnl_A Low affinity immunoglob 97.8 3.2E-05 1.1E-09 66.3 6.9 72 282-366 98-173 (175)
237 1n26_A IL-6 receptor alpha cha 97.8 4.6E-05 1.6E-09 72.6 8.6 88 272-367 5-93 (325)
238 1fo0_A Protein (BM3.3 T cell r 97.8 4.9E-05 1.7E-09 61.6 7.6 75 279-355 7-95 (116)
239 2nzi_A Titin; IG-domain, FNIII 97.8 0.0001 3.4E-09 68.1 10.7 125 225-368 63-198 (305)
240 4frw_A Poliovirus receptor-rel 97.8 5.9E-05 2E-09 65.2 8.6 77 281-366 127-212 (218)
241 2qhl_A Novel immune-type recep 97.8 4.2E-05 1.4E-09 61.5 7.1 74 279-355 6-97 (111)
242 3kld_A Contactin 4, axcam, BIG 97.8 2.1E-05 7.2E-10 76.3 6.3 80 280-368 213-295 (384)
243 3u83_A Poliovirus receptor-rel 97.8 2.7E-05 9.2E-10 72.9 6.8 75 283-369 243-322 (331)
244 4ffy_L DENV1-E111 single chain 97.8 5.9E-05 2E-09 62.2 8.1 77 279-355 8-96 (126)
245 1ugn_A LIR1, leukocyte immunog 97.8 1.6E-05 5.4E-10 69.6 4.8 64 282-356 110-179 (198)
246 2gi7_A GPVI protein; IG-like d 97.8 1.4E-05 4.7E-10 69.5 4.4 63 283-356 104-166 (184)
247 2ifg_A High affinity nerve gro 97.8 2.2E-05 7.5E-10 75.3 6.2 75 283-367 257-345 (347)
248 3auv_A SC-DSFV derived from th 97.8 4.5E-05 1.5E-09 70.7 8.1 87 279-368 19-120 (276)
249 1nfd_E H57 FAB; complex (immun 97.8 4.8E-05 1.7E-09 66.8 7.9 73 280-355 7-90 (212)
250 3pv7_A B7-H6, IG-like domain-c 97.8 9.5E-05 3.2E-09 66.7 9.9 89 279-367 10-118 (248)
251 2o26_X MAST/stem cell growth f 97.8 4.3E-05 1.5E-09 70.4 7.6 83 281-367 197-288 (290)
252 3qs9_E FL cytokine receptor; i 97.8 1.7E-05 5.7E-10 81.6 5.3 77 281-367 335-414 (527)
253 1f3r_B FV antibody fragment; I 97.8 5E-05 1.7E-09 69.5 8.0 90 279-372 146-250 (257)
254 2z35_A T-cell receptor alpha-c 97.8 0.00011 3.8E-09 59.0 9.2 73 279-354 7-92 (112)
255 3bdb_A Novel immune-type recep 97.8 7E-05 2.4E-09 63.1 8.3 92 280-374 7-120 (137)
256 3sgj_C Human FCG3A receptor; r 97.8 3.7E-05 1.3E-09 68.4 6.8 70 282-366 17-87 (204)
257 1f2q_A High affinity immunoglo 97.8 1.7E-05 5.8E-10 68.0 4.4 72 282-367 95-171 (176)
258 3noi_A Natural cytotoxicity tr 97.8 2.4E-05 8.1E-10 63.9 5.1 76 279-354 14-101 (120)
259 2ol3_A BM3.3 T-cell receptor a 97.8 0.00013 4.5E-09 62.0 9.9 95 279-375 7-124 (142)
260 1nko_A Sialic acid binding IG- 97.8 5.3E-05 1.8E-09 62.6 7.2 77 279-355 13-109 (132)
261 3d9a_H Heavy chain of hyhel10 97.8 7.2E-05 2.5E-09 65.8 8.5 86 281-367 9-113 (210)
262 2vr9_A Roundabout 1, ROBO; imm 97.8 2.4E-05 8.3E-10 68.8 5.3 73 280-355 116-191 (217)
263 3nl4_H Antigen binding fragmen 97.8 9E-05 3.1E-09 65.5 9.1 76 280-356 7-97 (215)
264 3gkz_A Anti-methamphetamine si 97.8 3.7E-05 1.3E-09 70.1 6.7 76 280-356 16-108 (257)
265 4fmk_A Poliovirus receptor-rel 97.8 4.4E-05 1.5E-09 66.3 6.9 75 281-355 10-104 (225)
266 1xau_A B- and T-lymphocyte att 97.7 5.3E-05 1.8E-09 62.4 6.8 80 282-365 24-112 (122)
267 3oq3_B IFN-alpha/beta binding 97.7 0.00012 4.2E-09 69.2 10.5 80 280-365 236-328 (329)
268 3esu_F Antibody 14B7* light ch 97.7 4E-05 1.4E-09 69.2 6.9 75 280-355 139-231 (250)
269 1u3h_A T-cell receptor alpha-c 96.9 3.9E-06 1.3E-10 67.7 0.0 73 280-355 7-92 (110)
270 3bkj_L WO2 IGG2A FAB fragment 97.7 6.9E-05 2.4E-09 68.1 8.4 89 279-367 41-146 (252)
271 1pz5_B Heavy chain of FAB (SYA 97.7 7.5E-05 2.6E-09 66.2 8.4 87 280-367 8-120 (220)
272 2zg1_A Sialic acid-binding IG- 97.7 3E-05 1E-09 68.0 5.7 78 279-356 7-104 (214)
273 1oll_A NK receptor; immune sys 97.7 1.9E-05 6.5E-10 68.9 4.3 64 282-356 108-171 (188)
274 1wio_A CD4, T-cell surface gly 97.7 9E-05 3.1E-09 70.9 9.5 84 280-367 2-99 (363)
275 2p1y_A Bispecific alpha/beta T 97.7 6.6E-05 2.3E-09 67.2 8.0 74 279-356 7-95 (238)
276 2ghw_B Anti-SARS SCFV antibody 97.7 0.00011 3.6E-09 66.3 9.3 85 279-366 142-241 (247)
277 1f3r_B FV antibody fragment; I 97.7 7.2E-05 2.5E-09 68.4 8.3 75 281-356 9-100 (257)
278 1mju_H Immunoglobulin MS6-12; 97.7 0.00011 3.8E-09 66.1 9.4 87 280-367 8-116 (227)
279 3uzq_A Anti-dengue MAB 4E11; d 97.7 7.4E-05 2.5E-09 68.0 8.3 88 279-367 8-117 (253)
280 2p45_B Antibody CAB-RN05; seMe 97.7 0.00014 4.7E-09 59.6 9.1 74 281-355 11-102 (123)
281 2q87_A CMRF35-H antigen; all-b 97.7 4E-05 1.4E-09 61.3 5.7 75 280-356 4-90 (110)
282 3uzq_A Anti-dengue MAB 4E11; d 97.7 8.4E-05 2.9E-09 67.6 8.6 96 279-374 140-251 (253)
283 2jju_A Signal regulatory prote 97.7 9.4E-05 3.2E-09 61.0 8.1 74 279-355 10-95 (127)
284 1nqb_A Single-chain antibody f 97.7 7.7E-05 2.6E-09 68.5 8.3 76 280-356 8-101 (256)
285 1bih_A Hemolin; insect immunit 97.7 5.6E-05 1.9E-09 72.4 7.7 81 280-368 220-308 (395)
286 3r4d_A CEA-related cell adhesi 97.7 0.0001 3.6E-09 64.0 8.8 84 281-367 8-108 (208)
287 3umt_A SCFV heavy chain and li 97.7 9.4E-05 3.2E-09 67.4 8.8 75 281-356 11-103 (256)
288 2h32_A Immunoglobulin IOTA cha 97.7 4.8E-05 1.6E-09 63.1 6.2 87 281-367 9-115 (126)
289 2v5m_A Dscam; neurobiology SPL 97.7 3.7E-05 1.3E-09 73.7 6.3 70 280-365 315-387 (388)
290 2wng_A Tyrosine-protein phosph 97.7 5.9E-05 2E-09 71.0 7.6 75 279-356 10-96 (327)
291 2ghw_B Anti-SARS SCFV antibody 97.7 6.5E-05 2.2E-09 67.7 7.6 88 280-368 10-120 (247)
292 2gki_A Nuclease; anti-DNA anti 97.7 8.1E-05 2.8E-09 69.8 8.5 99 279-377 166-282 (291)
293 1xed_A Polymeric-immunoglobuli 97.7 0.00017 5.9E-09 59.0 9.4 90 279-368 7-112 (117)
294 2p1y_A Bispecific alpha/beta T 97.7 4.8E-05 1.7E-09 68.1 6.6 75 279-356 134-221 (238)
295 2d7t_H Anti polyhydroxybutyrat 97.7 0.00014 4.6E-09 61.6 9.0 96 281-377 9-126 (139)
296 3ry4_A Low affinity immunoglob 97.7 3.2E-05 1.1E-09 65.4 5.0 60 282-355 95-155 (170)
297 2i24_N NEW antigen receptor PB 97.7 9.3E-05 3.2E-09 61.2 7.7 74 279-354 7-86 (121)
298 3ux9_B SCFV antibody; five hel 97.7 8.3E-05 2.8E-09 67.5 8.1 75 280-355 10-95 (256)
299 1f97_A Junction adhesion molec 97.7 6.2E-05 2.1E-09 65.3 6.9 78 282-367 114-207 (212)
300 2c1o_A IGK-C protein; FAB frag 97.7 8.5E-05 2.9E-09 67.3 8.1 78 279-356 45-135 (254)
301 3omz_A Human vdelta1 gamma del 97.7 6.3E-05 2.2E-09 68.7 7.2 74 279-355 9-100 (259)
302 2otu_A FV light chain variable 97.7 9.5E-05 3.2E-09 59.8 7.5 74 280-355 9-97 (115)
303 4dkd_C Macrophage colony-stimu 97.7 6.1E-05 2.1E-09 69.0 7.1 80 280-367 97-181 (292)
304 3m8o_H Immunoglobulin A1 heavy 97.7 0.00012 4.1E-09 65.0 8.9 76 280-356 8-103 (221)
305 3sbw_C Programmed cell death 1 97.7 0.00013 4.5E-09 64.1 9.0 89 279-367 8-115 (222)
306 1uct_A Immunoglobulin alpha FC 97.7 3.4E-05 1.2E-09 69.5 5.2 64 282-355 18-85 (218)
307 1cs6_A Axonin-1; neural cell a 97.7 2.3E-05 8E-10 75.0 4.3 63 285-355 20-83 (382)
308 3ry4_A Low affinity immunoglob 97.7 5.6E-05 1.9E-09 63.9 6.2 72 281-367 13-85 (170)
309 3bik_B Programmed cell death p 97.7 0.00017 6E-09 60.4 9.2 96 279-376 16-132 (134)
310 3qs9_E FL cytokine receptor; i 97.7 0.00011 3.8E-09 75.4 9.6 87 280-369 235-325 (527)
311 2v5m_A Dscam; neurobiology SPL 97.7 0.00011 3.9E-09 70.2 9.1 84 280-367 220-306 (388)
312 3p3y_A Neurofascin; IG domains 97.7 7.3E-05 2.5E-09 71.7 7.7 79 280-368 230-312 (404)
313 3q5y_A TCR N15 beta; IG, T cel 97.7 0.0001 3.6E-09 66.2 8.3 72 279-354 9-95 (240)
314 3ux9_B SCFV antibody; five hel 97.7 5.7E-05 2E-09 68.6 6.6 74 281-355 143-234 (256)
315 3p2t_A Leukocyte immunoglobuli 97.7 1.7E-05 5.7E-10 69.3 2.8 65 283-355 15-79 (196)
316 3k0w_A Mucosa-associated lymph 97.7 5.7E-05 1.9E-09 67.1 6.3 76 279-369 125-204 (218)
317 2vr9_A Roundabout 1, ROBO; imm 97.7 3.1E-05 1.1E-09 68.1 4.4 69 279-355 16-90 (217)
318 3mlr_H Human monoclonal anti-H 97.7 0.00017 5.8E-09 64.9 9.4 75 281-356 9-101 (226)
319 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.7 9.9E-05 3.4E-09 67.5 8.0 74 279-355 10-97 (256)
320 1q9r_B S25-2 FAB (IGG1K) heavy 97.7 0.00015 5.3E-09 64.2 9.0 86 281-367 9-122 (222)
321 4fom_A Poliovirus receptor-rel 97.7 1.4E-05 4.7E-10 74.4 2.1 75 282-368 222-301 (308)
322 1ypz_E T cell receptor delta, 97.6 0.00011 3.6E-09 65.6 7.9 74 279-356 8-93 (207)
323 2c5d_C AXL oncogene, tyrosine- 97.6 6E-05 2E-09 65.2 6.1 73 280-365 114-191 (195)
324 1pew_A JTO2, A lambda-6 type i 97.6 7.8E-05 2.7E-09 59.6 6.3 72 280-355 8-93 (109)
325 2ec8_A MAST/stem cell growth f 97.6 6.7E-05 2.3E-09 75.5 7.2 79 280-367 321-411 (524)
326 2gi7_A GPVI protein; IG-like d 97.6 4.3E-05 1.5E-09 66.3 5.1 56 283-355 18-73 (184)
327 2yc1_A Single chain antibody f 97.6 0.00015 5E-09 58.7 8.0 74 281-355 9-100 (117)
328 2xzc_L FAB A.17 light chain; i 97.6 8E-05 2.7E-09 65.7 6.9 85 280-366 8-109 (216)
329 3ejj_X Macrophage colony-stimu 97.6 6.1E-05 2.1E-09 68.9 6.3 84 281-367 195-281 (289)
330 1c5d_H Monoclonal antibody aga 97.6 0.00021 7.1E-09 63.5 9.6 87 280-367 8-117 (215)
331 2yd9_A Receptor-type tyrosine- 97.6 3.7E-05 1.3E-09 71.4 4.9 74 282-369 215-293 (304)
332 1n4x_H Immunoglobulin heavy ch 97.6 0.00012 4.2E-09 59.5 7.4 74 281-355 9-100 (120)
333 2d3v_A Leukocyte immunoglobuli 97.6 2.1E-05 7.1E-10 68.8 2.9 65 283-355 15-79 (196)
334 2fbj_H IGA-kappa J539 FAB (hea 97.6 0.00018 6.1E-09 64.3 9.2 86 281-367 9-118 (220)
335 1dr9_A B7-1 (CD80), T lymphocy 97.6 3.7E-05 1.3E-09 67.0 4.5 83 281-368 3-107 (201)
336 3pl6_D MBP peptide / T-cell re 97.6 0.00018 6.3E-09 65.8 9.4 73 279-355 33-121 (268)
337 1p4b_L Antibody variable light 97.6 0.00012 4.1E-09 61.7 7.5 76 281-356 14-100 (135)
338 1c1e_H Catalytic antibody 1E9 97.6 0.00017 5.9E-09 63.6 8.9 87 280-367 8-119 (219)
339 2gjj_A A21 single-chain antibo 97.6 0.00012 4.1E-09 67.6 8.1 90 279-368 12-119 (264)
340 3b5h_A Cervical EMMPRIN, HAB18 97.6 0.00012 4.1E-09 62.6 7.5 77 281-368 7-83 (184)
341 3rrq_A Protein PD-1, programme 97.6 0.00012 4.3E-09 60.7 7.4 93 279-373 8-121 (129)
342 3bqu_C 3H6 FAB light chain; be 97.6 4E-05 1.4E-09 68.4 4.6 75 279-356 30-115 (233)
343 3umt_A SCFV heavy chain and li 97.6 0.00015 5.1E-09 66.0 8.6 73 280-355 146-229 (256)
344 3kg5_A B-cell antigen receptor 97.6 0.00019 6.6E-09 60.6 8.6 72 279-355 25-101 (134)
345 2oi9_C V beta, T cell receptor 97.6 0.00022 7.4E-09 58.6 8.7 73 279-355 8-95 (121)
346 1ry7_B FGFR-3, fibroblast grow 97.6 8.4E-06 2.9E-10 76.7 0.0 80 279-367 15-96 (334)
347 1dee_B IGM RF 2A2; FAB-IBP com 97.6 0.00018 6.2E-09 64.3 8.8 87 280-367 8-121 (223)
348 1a2y_B IGG1-kappa D1.3 FV (hea 97.6 0.00013 4.3E-09 59.2 7.0 73 282-355 10-99 (116)
349 3laf_A Deleted in colorectal c 97.6 8E-05 2.7E-09 71.6 6.8 79 280-367 229-311 (403)
350 1vca_A VCAM-D1,2, human vascul 97.6 0.00017 5.8E-09 63.9 8.5 75 282-367 11-90 (202)
351 1oll_A NK receptor; immune sys 97.6 4E-05 1.4E-09 66.8 4.2 64 283-355 14-78 (188)
352 1op3_H FAB 2G12, heavy chain; 97.6 0.00017 5.7E-09 64.6 8.4 76 280-356 8-101 (225)
353 3omz_A Human vdelta1 gamma del 97.6 0.00023 7.9E-09 64.9 9.5 74 279-354 143-229 (259)
354 2xt1_B Camelid VHH 9; viral pr 97.6 0.00023 7.9E-09 58.4 8.6 74 280-354 10-101 (121)
355 2d9q_B Granulocyte colony-stim 97.6 0.00011 3.6E-09 69.4 7.4 80 279-366 7-96 (313)
356 1fnl_A Low affinity immunoglob 97.6 6.5E-05 2.2E-09 64.4 5.4 72 280-366 15-87 (175)
357 2ocw_A Polymeric-immunoglobuli 97.6 0.00049 1.7E-08 69.9 12.8 128 225-367 76-221 (585)
358 1za6_B IGG heavy chain; immuno 97.6 0.0003 1E-08 67.0 10.6 86 281-367 9-115 (344)
359 4i0k_A CD276 antigen; immunogl 97.6 8.4E-05 2.9E-09 65.5 6.2 79 283-368 121-207 (222)
360 1qfo_A Protein (sialoadhesin); 97.6 0.00023 7.7E-09 57.5 8.3 76 280-356 8-101 (119)
361 2or7_A T-cell immunoglobulin a 97.6 0.0002 6.9E-09 57.6 8.0 87 279-367 4-110 (115)
362 1ugn_A LIR1, leukocyte immunog 97.6 2.7E-05 9.2E-10 68.1 2.9 76 283-367 15-97 (198)
363 2v9r_A Roundabout homolog 1; p 97.6 7.3E-05 2.5E-09 65.0 5.7 81 279-367 16-109 (212)
364 3liz_H 4C3 monoclonal antibody 97.6 0.00018 6.1E-09 65.8 8.5 76 280-356 8-101 (253)
365 3r0n_A Poliovirus receptor-rel 97.6 9.7E-05 3.3E-09 60.3 6.0 76 280-355 10-114 (128)
366 2oz4_A Intercellular adhesion 97.6 7.5E-05 2.6E-09 68.2 5.9 70 280-368 193-265 (265)
367 3gkz_A Anti-methamphetamine si 97.6 0.00016 5.5E-09 65.7 8.2 74 279-355 148-233 (257)
368 3o4o_C Interleukin-1 receptor 97.6 0.00018 6.3E-09 67.6 8.8 79 281-368 129-221 (339)
369 1kxt_B Immunoglobulin VHH frag 97.6 0.00025 8.5E-09 58.7 8.5 75 281-356 9-100 (127)
370 3b9v_A Heavy chain variable do 97.6 0.00015 5.2E-09 58.9 7.1 74 281-355 9-100 (120)
371 1moe_A Anti-CEA MAB T84.66; an 97.6 0.00018 6.1E-09 64.4 8.1 74 280-354 127-218 (240)
372 3k0w_A Mucosa-associated lymph 97.6 7.1E-05 2.4E-09 66.5 5.4 76 278-368 24-103 (218)
373 4ei6_B Vbeta16 XV19 type II na 97.6 0.0002 6.7E-09 64.4 8.4 73 279-355 9-97 (245)
374 1nbq_A JAM, junctional adhesio 97.5 4.2E-05 1.4E-09 66.2 3.6 66 282-355 117-192 (209)
375 3dmk_A DOWN syndrome cell adhe 97.5 0.00032 1.1E-08 74.5 11.1 115 224-355 677-794 (816)
376 2atp_B T-cell surface glycopro 97.5 0.0002 6.8E-09 57.7 7.4 74 280-355 6-100 (115)
377 3u6r_L Antibody 1:7 (light cha 97.5 0.00029 1E-08 60.0 8.8 74 280-356 8-92 (143)
378 3juy_B 3B3 single chain varian 97.5 0.00024 8.2E-09 64.6 8.8 75 279-355 156-241 (256)
379 3ejj_X Macrophage colony-stimu 97.5 0.00016 5.5E-09 66.1 7.6 80 280-367 97-181 (289)
380 2wzp_D Camelid VHH5; baseplate 97.5 0.00022 7.6E-09 58.3 7.7 74 281-355 9-100 (123)
381 1bec_A 14.3.D T cell antigen r 97.5 0.00023 7.7E-09 64.3 8.5 74 279-356 6-94 (238)
382 1sjv_A R9; camelids antibody, 97.5 0.00011 3.6E-09 59.3 5.7 74 281-355 9-99 (114)
383 2wbj_D OB TCR; transmembrane, 97.5 0.00013 4.4E-09 67.7 6.9 74 279-355 31-121 (279)
384 1j05_H T84.66 antibody, anti-C 97.5 0.00016 5.4E-09 59.0 6.7 74 281-355 9-100 (121)
385 1nez_G T-cell surface glycopro 97.5 0.00029 1E-08 58.7 8.4 73 280-355 12-106 (128)
386 1hkf_A NKP44, NK cell activati 97.5 0.00057 1.9E-08 56.3 10.1 77 278-355 16-105 (122)
387 2d3v_A Leukocyte immunoglobuli 97.5 3.9E-05 1.3E-09 67.1 3.1 66 282-355 109-177 (196)
388 3p2t_A Leukocyte immunoglobuli 97.5 5.1E-05 1.7E-09 66.2 3.8 68 283-356 110-177 (196)
389 1kxv_C Camelid VHH domain CAB1 97.5 0.0003 1E-08 57.4 8.3 74 281-355 9-99 (121)
390 2ocw_A Polymeric-immunoglobuli 97.5 0.00025 8.6E-09 72.1 9.5 85 280-369 450-548 (585)
391 2xqy_G A13-D6.3 monoclonal ant 97.5 0.00038 1.3E-08 64.5 9.9 87 280-367 14-124 (261)
392 1x9q_A SCFV, 4M5.3 anti-fluore 97.5 0.00016 5.4E-09 66.6 7.3 89 279-367 22-127 (268)
393 1hxm_B Gamma-delta T-cell rece 97.5 0.00027 9.2E-09 64.0 8.7 77 279-356 8-102 (242)
394 3bp6_B Programmed cell death 1 97.5 6.9E-05 2.4E-09 65.3 4.5 73 283-367 114-193 (202)
395 2nms_A CMRF35-like-molecule 1; 97.5 0.00067 2.3E-08 56.0 10.3 89 279-369 9-113 (124)
396 1mqk_H Antibody 7E2 FV fragmen 97.5 0.00032 1.1E-08 57.9 8.3 89 281-370 9-121 (127)
397 4hwn_A FC receptor-like A; FCR 97.5 8.2E-05 2.8E-09 59.9 4.6 61 284-355 19-81 (108)
398 4fom_A Poliovirus receptor-rel 97.5 0.00028 9.5E-09 65.5 8.8 74 280-355 7-95 (308)
399 1u9k_A Triggering receptor exp 97.5 0.00015 5E-09 58.7 6.0 76 279-355 6-97 (114)
400 1uct_A Immunoglobulin alpha FC 97.5 4.9E-05 1.7E-09 68.5 3.4 64 282-355 115-178 (218)
401 3n9g_H FAB fragment of MAB CR4 97.5 0.00022 7.6E-09 64.1 7.7 74 281-355 9-100 (230)
402 3auv_A SC-DSFV derived from th 97.5 0.00018 6E-09 66.6 7.2 76 280-356 142-235 (276)
403 2rcj_C Light chain; immunoglob 97.5 0.00033 1.1E-08 70.4 9.8 85 280-367 8-109 (523)
404 2yz1_A Tyrosine-protein phosph 97.5 0.00022 7.4E-09 57.7 6.9 74 279-355 14-99 (120)
405 1z7z_I Intercellular adhesion 97.5 0.0001 3.5E-09 72.4 5.9 69 280-367 378-449 (450)
406 3bp6_A Programmed cell death p 97.5 0.00047 1.6E-08 56.0 8.9 74 280-355 7-94 (117)
407 1nkr_A P58-CL42 KIR; inhibitor 97.5 0.00011 3.6E-09 64.6 5.3 66 282-354 17-83 (201)
408 2znx_A SCFV; fluorotryptohpan, 97.5 0.00028 9.6E-09 63.8 8.3 74 282-356 132-222 (242)
409 1f2q_A High affinity immunoglo 97.5 7.8E-05 2.7E-09 63.8 4.3 72 280-366 12-84 (176)
410 1yc7_A Anti-VSG immunoglobulin 97.5 0.00033 1.1E-08 57.9 7.9 75 280-355 8-99 (124)
411 3fku_X Neutralizing antibody F 97.5 0.00012 4.1E-09 68.2 5.9 76 280-356 8-101 (280)
412 3dmm_D T-cell surface glycopro 97.5 0.00072 2.5E-08 57.8 10.4 94 280-376 9-127 (150)
413 1ypz_F T-cell receptor gamma c 97.5 0.00033 1.1E-08 63.2 8.6 76 279-355 8-100 (230)
414 1qok_A MFE-23 recombinant anti 97.5 0.00026 8.8E-09 65.8 8.1 88 280-368 34-147 (282)
415 3t0v_A Immunoglobulin variable 97.5 0.0004 1.4E-08 57.4 8.4 75 280-355 8-93 (123)
416 1svz_A Immunoglobulin;, single 97.5 0.0002 7E-09 64.5 7.2 74 282-356 137-228 (247)
417 3bia_X T-cell immunoglobulin a 97.5 0.00089 3E-08 53.8 10.3 89 279-368 3-112 (116)
418 2vsd_A CHIR AB1; immune system 97.5 5.1E-05 1.7E-09 60.7 2.7 61 283-355 15-77 (105)
419 3o3u_N Maltose-binding peripla 97.5 0.0002 6.9E-09 73.0 7.8 87 279-367 373-469 (581)
420 1gsm_A Madcam-1, mucosal addre 97.5 0.00018 6E-09 65.7 6.6 78 280-367 15-95 (210)
421 3tv3_H PGT128 heavy chain, IG 97.4 0.00045 1.5E-08 62.6 9.3 76 280-356 8-108 (239)
422 1rhf_A Tyrosine-protein kinase 97.4 0.00015 5.1E-09 61.8 5.8 61 280-355 106-167 (182)
423 3v2a_R Vascular endothelial gr 97.4 1.9E-05 6.5E-10 82.8 0.0 78 281-368 675-757 (772)
424 2x1q_A Gelsolin nanobody; cont 97.4 0.00028 9.6E-09 58.3 7.2 74 281-355 9-100 (127)
425 2j6e_L IGM, FAB light chain; a 97.4 0.00016 5.4E-09 64.4 6.1 76 280-356 27-113 (234)
426 1oga_E TRBC1, T-cell receptor 97.4 0.00044 1.5E-08 63.0 9.2 74 279-356 10-98 (252)
427 1mfa_H IGG1-lambda Se155-4 FAB 97.4 0.00028 9.4E-09 57.4 7.0 74 281-355 9-100 (120)
428 4i0k_A CD276 antigen; immunogl 97.4 5.9E-05 2E-09 66.5 3.1 75 281-355 4-93 (222)
429 3sbw_C Programmed cell death 1 97.4 0.00015 5.1E-09 63.7 5.6 80 283-369 127-213 (222)
430 3qib_D 2B4 beta chain; IG doma 97.4 0.00031 1E-08 64.4 8.0 73 279-355 34-122 (270)
431 1rjc_A 1D2L19, camelid heavy c 97.4 0.0004 1.4E-08 58.6 8.0 74 281-355 9-100 (137)
432 3r8b_B G5-8, enterotoxin type 97.4 0.00042 1.4E-08 57.2 8.0 74 279-355 12-100 (125)
433 1i3u_A Antibody VHH LAMA domai 97.4 0.00024 8.1E-09 58.6 6.5 74 281-355 9-105 (127)
434 3iu4_H CHP3 FAB heavy chain; a 97.4 0.00034 1.2E-08 64.9 8.2 74 281-355 9-99 (263)
435 1sy6_A T-cell surface glycopro 97.4 0.00011 3.8E-09 65.3 4.7 56 285-356 16-71 (204)
436 3rjd_A High affinity immunoglo 97.4 0.00017 5.8E-09 64.8 5.9 61 280-355 9-69 (262)
437 4dkd_C Macrophage colony-stimu 97.4 0.00016 5.4E-09 66.2 5.8 84 282-369 196-283 (292)
438 2wng_A Tyrosine-protein phosph 97.4 0.00011 3.9E-09 69.0 5.0 65 284-355 232-304 (327)
439 3mjg_X Beta-type platelet-deri 97.4 0.00014 4.9E-09 66.6 5.5 65 280-355 8-72 (289)
440 3uto_A Twitchin; kinase, muscl 97.4 0.0002 6.8E-09 74.6 7.2 77 279-365 489-572 (573)
441 1iga_A IGA1; immunoglobulin; N 97.4 0.00048 1.6E-08 68.7 9.7 94 273-367 2-122 (475)
442 2hp4_A T-cell surface glycopro 97.4 0.00031 1.1E-08 56.9 6.8 74 280-355 8-98 (114)
443 3bae_H WO2 IGG2A FAB fragment 97.4 0.00035 1.2E-08 62.6 7.8 77 280-356 8-102 (228)
444 1dn0_B IGM-kappa cold agglutin 97.4 0.00072 2.5E-08 60.9 9.8 73 281-354 9-98 (232)
445 3rjd_A High affinity immunoglo 97.4 0.00033 1.1E-08 62.8 7.5 74 281-367 91-167 (262)
446 1qok_A MFE-23 recombinant anti 97.4 0.0004 1.4E-08 64.5 8.3 87 279-369 169-270 (282)
447 3cx5_J Heavy chain (VH) of FV- 97.4 0.00028 9.6E-09 58.2 6.5 74 281-355 9-100 (127)
448 1wio_A CD4, T-cell surface gly 97.4 0.00028 9.6E-09 67.4 7.3 87 280-366 184-292 (363)
449 1zvy_A Immunoglobulin heavy ch 97.4 0.00046 1.6E-08 58.1 7.8 74 281-355 9-100 (136)
450 1xiw_D Immunoglobulin heavy ch 97.4 0.00032 1.1E-08 57.3 6.6 74 281-355 9-100 (122)
451 1nqb_A Single-chain antibody f 97.4 0.00051 1.7E-08 62.9 8.7 77 279-355 128-217 (256)
452 3k1k_C Enhancer; nanobody, ant 97.4 0.00058 2E-08 56.4 8.2 73 282-355 12-102 (123)
453 2o26_X MAST/stem cell growth f 97.4 0.00028 9.7E-09 64.8 6.9 78 279-366 98-182 (290)
454 3bn9_D E2 FAB heavy chain; ant 97.3 0.00081 2.8E-08 62.3 9.9 75 281-356 9-101 (257)
455 1e07_A Carcinoembryonic antige 97.3 0.001 3.5E-08 68.6 11.6 75 282-367 121-201 (642)
456 2ec8_A MAST/stem cell growth f 97.3 0.00092 3.1E-08 67.1 11.0 85 280-368 219-310 (524)
457 3u83_A Poliovirus receptor-rel 97.3 0.00037 1.3E-08 65.1 7.5 90 279-368 21-130 (331)
458 1dlf_H Anti-dansyl immunoglobu 97.3 0.00053 1.8E-08 56.2 7.6 74 281-355 9-102 (124)
459 4fqp_A Poliovirus receptor; im 97.3 0.00043 1.5E-08 64.6 7.8 75 280-354 8-99 (313)
460 1dr9_A B7-1 (CD80), T lymphocy 97.3 0.00026 8.8E-09 61.5 5.9 62 285-355 119-186 (201)
461 3qhz_H Human monoclonal antibo 97.3 0.0005 1.7E-08 61.7 7.8 75 281-356 9-105 (232)
462 3vh8_G Killer cell immunoglobu 97.3 0.00014 4.9E-09 68.0 4.4 62 282-354 33-94 (316)
463 3k74_B Nanobody; immunoglobuli 97.3 0.00063 2.2E-08 55.1 7.7 74 281-355 7-98 (115)
464 1e07_A Carcinoembryonic antige 97.3 0.0003 1E-08 72.6 7.1 70 280-366 567-639 (642)
465 3sob_H Antibody heavy chain, l 97.3 0.00067 2.3E-08 62.0 8.8 74 281-355 32-123 (256)
466 1zvh_A Immunoglobulin heavy ch 97.3 0.00034 1.2E-08 58.5 6.3 74 281-355 9-100 (134)
467 3dmk_A DOWN syndrome cell adhe 97.3 0.0021 7.1E-08 68.2 13.7 84 280-367 256-342 (816)
468 1qgc_4 Protein (immunoglobulin 97.3 0.00056 1.9E-08 66.6 8.7 75 280-355 226-318 (438)
469 3u2s_H PG9 heavy chain; greek 97.3 0.00052 1.8E-08 63.0 8.0 75 280-355 7-99 (248)
470 2nw2_A ELS4 TCR alpha chain; T 97.3 0.00068 2.3E-08 60.7 8.5 73 280-355 7-91 (200)
471 1hng_A CD2; T lymphocyte adhes 97.3 0.0003 1E-08 61.0 5.8 96 226-355 63-161 (176)
472 1jtp_A Single-domain antibody; 97.3 0.00087 3E-08 57.2 8.6 74 281-355 9-100 (148)
473 1hzh_H IGG, immunoglobulin hea 97.3 0.00064 2.2E-08 67.2 8.9 75 281-356 9-101 (457)
474 1p6f_A NKP46, natural cytotoxi 97.3 0.00017 5.8E-09 66.3 4.4 64 282-356 111-174 (242)
475 2gki_A Nuclease; anti-DNA anti 97.3 0.00041 1.4E-08 64.9 7.1 76 280-356 30-123 (291)
476 1lp9_E T-cell receptor alpha c 97.3 0.00092 3.1E-08 59.4 8.9 74 279-355 8-94 (194)
477 3iy0_H FAB 14, heavy domain; c 97.2 0.00063 2.2E-08 55.6 7.1 74 281-355 9-100 (120)
478 3mj8_L Stimulatory hamster ant 97.2 0.00017 5.8E-09 63.2 3.9 77 286-370 128-212 (213)
479 2eys_A NKT15; natural killer T 97.2 0.00067 2.3E-08 61.3 7.7 74 279-355 10-96 (210)
480 1nkr_A P58-CL42 KIR; inhibitor 97.2 0.00039 1.3E-08 60.9 5.9 61 283-355 118-182 (201)
481 2aw2_A B and T lymphocyte atte 97.2 0.00081 2.8E-08 54.9 7.2 76 282-365 21-106 (120)
482 1igt_B IGG2A intact antibody - 97.2 0.0008 2.7E-08 66.1 8.7 87 280-367 8-118 (444)
483 3k81_A Single strand antibody 97.2 0.0011 3.8E-08 55.4 8.0 74 281-355 9-99 (127)
484 1b6u_A KIR2DL3, P58 killer cel 97.2 0.00056 1.9E-08 63.6 6.7 66 282-354 16-82 (257)
485 1qgc_4 Protein (immunoglobulin 97.2 0.00073 2.5E-08 65.7 7.8 88 279-366 8-111 (438)
486 3fku_X Neutralizing antibody F 97.2 0.00074 2.5E-08 62.8 7.4 92 282-374 149-257 (280)
487 3d85_D IL-12B, interleukin-12 97.2 0.00049 1.7E-08 65.8 6.3 67 284-367 18-84 (306)
488 3nn8_A Engineered SCFV, heavy 97.2 0.00096 3.3E-08 54.7 7.3 73 281-354 9-100 (122)
489 2gjj_A A21 single-chain antibo 97.2 0.0006 2.1E-08 62.8 6.7 74 282-356 148-239 (264)
490 1hxm_A Gamma-delta T-cell rece 97.1 0.00091 3.1E-08 61.0 7.8 77 279-356 8-97 (229)
491 1x9q_A SCFV, 4M5.3 anti-fluore 97.1 0.00069 2.4E-08 62.2 7.1 75 280-355 159-253 (268)
492 3u1s_H FAB PGT145 heavy chain; 97.1 0.00089 3E-08 62.0 7.8 73 281-354 32-122 (267)
493 1kgc_D T-cell receptor alpha c 97.1 0.0015 5.2E-08 58.5 9.1 74 280-355 7-91 (206)
494 2frg_P TREM-like transcript-1; 97.1 0.0019 6.5E-08 51.8 8.8 85 279-366 4-104 (106)
495 3tpk_A Immunoglobulin heavy ch 97.1 0.001 3.5E-08 56.0 7.4 73 282-355 14-104 (136)
496 2pnd_A V-SET and immunoglobuli 97.1 0.00091 3.1E-08 54.2 6.8 76 279-355 8-99 (119)
497 1i1r_A GP130, interleukin-6 re 97.1 0.00046 1.6E-08 64.6 5.7 69 278-355 10-85 (303)
498 3vh8_G Killer cell immunoglobu 97.1 0.00039 1.3E-08 65.1 5.2 64 284-355 130-195 (316)
499 1p6f_A NKP46, natural cytotoxi 97.1 0.0003 1E-08 64.6 4.3 64 283-355 17-81 (242)
500 2vyr_E Human single domain ant 97.1 0.0014 4.7E-08 56.4 8.1 74 281-355 9-100 (153)
No 1
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=100.00 E-value=1.6e-77 Score=636.10 Aligned_cols=353 Identities=31% Similarity=0.532 Sum_probs=300.4
Q ss_pred CeEEEEEcccccee----ee-----eeccccccCC--CCCceEEEEEe----------CCEEEEEEEeccccccccCcee
Q psy10772 8 RSLYVASDERIKQI----AL-----VMCAHRYDNC--LQPDFVGSYDI----------GKYVFFFFRETAVEYINCGKSV 66 (378)
Q Consensus 8 ~~l~v~~~~~~~~~----~~-----~~rt~~~ds~--~~p~FV~sf~~----------~d~VYFfF~E~a~e~~~~~~~~ 66 (378)
+.||||+..+.... ++ .+||+ ||++ ++|+||+++.+ ++||||||+|++.|++.+++.+
T Consensus 150 g~Ly~gt~~~~~g~~p~i~Rs~~~~~lrTe-~~~~~L~~p~FV~s~~i~~~~~~~~~~~~~VYFff~e~~~e~~~~~k~~ 228 (663)
T 1olz_A 150 GELYSGTSYNFLGSEPIISRNSSHSPLRTE-YAIPWLNEPSFVFADVIRKSPDSPDGEDDRVYFFFTEVSVEYEFVFRVL 228 (663)
T ss_dssp TEEEEEEESSTTSCSEEEEEECSSCCBCCC-SSTTTCSSCEEEEEEEECCCC----CCCCEEEEEEEEECSSCBCSSCCE
T ss_pred CeEEEEEeccccCCCceEEecccccccccc-chhhhccCCceeEeeeeeccccccccCCCEEEEEEeeccccccccCcce
Confidence 57999998765443 22 35885 7888 99999999744 6999999999999998889999
Q ss_pred eeeEeeccccccCCcccccccceeeeeeeeeccCCCCCCcccceeeeEEeecC---CCcEEEEEEecccCCCCceeeeee
Q psy10772 67 FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSF 143 (378)
Q Consensus 67 ~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~~---~~~~ly~vFtt~~~~~~~SAVC~y 143 (378)
+||||||||+|.||+++|+++||||+||||+|+.|+ .+++||+|||||+++. ++++|||||+++++++++||||+|
T Consensus 229 ~SRVaRvCk~D~GG~~~l~~~wtSflka~L~Cs~~~-~~~~fn~lq~~~~~~~~~~~~~vlygvFst~~~~~~~SAvC~f 307 (663)
T 1olz_A 229 IPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRPD-SGLVFNVLRDVFVLRSPGLKVPVFYALFTPQLNNVGLSAVCAY 307 (663)
T ss_dssp EEEEEEEETTCCCCSSSSTTSCSSCEEEEECCEEGG-GTEECCEEEEEEEECCTTCSSCEEEEEEECSSSCSSEEEEEEE
T ss_pred eeEEEEECCCCCCcccccccccceEEEEeEEecCCC-CCcccCceeeEEEeccCCCCCCEEEEEEccCCCCCCCcEEEEE
Confidence 999999999999999999999999999999999984 4789999999999864 468999999999999999999999
Q ss_pred eHHHHHHHhc-cccccc---cCCCCceeeccCCCCCCCCCCCCCCC---------CCCCCcccceeeccccCcccccccC
Q psy10772 144 SIEDIERAFV-GKFKEQ---ATSTSAWLPVLSSRVPEPRPGQCVND---------TETLPDSVLNFIRSHPLMDEAVAHR 210 (378)
Q Consensus 144 sl~dI~~~F~-g~f~~~---~~~~~~w~~~~~~~vP~prpg~C~~~---------s~~~pd~~l~fi~~hpLm~~~V~P~ 210 (378)
+|+||+++|+ |+|+++ +.++..|++ |.+++|+||||+|+++ +.++||++++|++.||||++.|.|+
T Consensus 308 ~l~~I~~~F~~g~~~~~~~~~~~~~~w~~-~~~~vp~prpg~C~~~~~~~~~~~ss~~lpd~~l~f~~~hpLm~~~v~pi 386 (663)
T 1olz_A 308 NLSTAEEVFSHGKYMQSTTVEQSHTKWVR-YNGPVPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPI 386 (663)
T ss_dssp EHHHHHHHHHHSCBEEEECCSTTCCEEEE-CCSCCCSSCTTCCCCHHHHTTTCCSGGGSCHHHHHHHHHCCEEEEEECCG
T ss_pred EHHHHHHHHhhccccccccccCCCceeEe-cCCCCCCCCCccCCCcccccccccccccCCcccccccccCcccccccccc
Confidence 9999999998 999987 346789998 5899999999999864 4678999999999999999999999
Q ss_pred CCceeEEecCCcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE---------------------------------
Q psy10772 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV--------------------------------- 257 (378)
Q Consensus 211 ~~~Pll~~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V--------------------------------- 257 (378)
.++|+|++.+.+||+||||++++.+ +++|+|+||||++|+||||
T Consensus 387 ~~~pll~~~~~~~T~iaVd~v~~~~---~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~ 463 (663)
T 1olz_A 387 DNRPRLIKKDVNYTQIVVDRTQALD---GTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGN 463 (663)
T ss_dssp GGSCSEEEESCCEEEEEEEEEECTT---SCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSS
T ss_pred CCcceEEeCCCceEEEEEEEEeccC---CCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCc
Confidence 9999999999999999999998875 5789999999999999976
Q ss_pred ------------------------------------------------------eceeeeeccCCCCCccccccc--cee
Q psy10772 258 ------------------------------------------------------KVRLLQDVSNTSDSICESSVG--RLK 281 (378)
Q Consensus 258 ------------------------------------------------------~~~~lqd~~~~~~~~C~~~~~--~k~ 281 (378)
...|+||+. +++++|..... .+.
T Consensus 464 ~~Lyv~s~~~V~~vpl~~C~~y~sC~~Cl~arDPyCgW~~~~~~C~~~~~c~~~~~~~~Qd~~-~~~~~C~~~~~~~~~~ 542 (663)
T 1olz_A 464 RFVYAGSNSGVVQAPLAFCGKHGTCEDCVLARDPYCAWSPPTATCVALHQTESPSRGLIQEMS-GDASVCPDKSKGSYRQ 542 (663)
T ss_dssp CEEEEECSSCEEEEESCCGGGCCSHHHHHHTTCTTEEEETTTTEEEETTTCCTTGGGCBCCTT-CCGGGSSSCCCCEEEE
T ss_pred cEEEEEEcCeEEEEEchhCCCCCCHHHHhcCCCCCccccCCCCceeCcccCCCccccceeecc-cCcccCCCcccccceE
Confidence 024578887 56688975432 366
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe-----
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT----- 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~----- 356 (378)
+++.+|++++|+|.+++|.+ .++|++|+.+ +....+++++.+++||+|++++.+|+|.|.|++.|.
T Consensus 543 v~v~~g~~~~L~C~~~sp~a----~v~W~~~~~~-----l~~~~~~~~~~~~~~LlI~~v~~~DsG~Y~C~A~e~~~~~~ 613 (663)
T 1olz_A 543 HFFKHGGTAELKCSQKSNLA----RVFWKFQNGV-----LKAESPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNKT 613 (663)
T ss_dssp EEEETTSCEEECCCCSCTTC----EEEEEESSSB-----CCCCSSSBCCTTTTCEEECSCCGGGCEEEEEEEEEECSSSE
T ss_pred EEEecCCcEEEEccCCCCCC----cEEEEECCee-----ccccCcceEEecCCeEEEEecCcccCeEEEEEEEECccCCC
Confidence 79999999999999988543 8999999875 443455677777899999999999999999999997
Q ss_pred ---eeEEEeeeecccccCCCCCC
Q psy10772 357 ---VLCTHNLTVDAHSNVADAPT 376 (378)
Q Consensus 357 ---~l~~~~~~v~~~~c~~~~~~ 376 (378)
+++.|.|+|...+-+.+.|+
T Consensus 614 ~~~~~~~~~l~V~v~P~~~~~p~ 636 (663)
T 1olz_A 614 VFQVVAKHVLEVKVVPKPVVAPT 636 (663)
T ss_dssp EEEEEEEEEEEEEC---------
T ss_pred ceEEEEEEEEEEEeCCccCCCCC
Confidence 79999999998777666543
No 2
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-73 Score=593.60 Aligned_cols=326 Identities=24% Similarity=0.404 Sum_probs=276.5
Q ss_pred CeEEEEEc---cccce--eee-----eeccccccCC--CCCceEEEEEe------CCEEEEEEEeccccccccCceeeee
Q psy10772 8 RSLYVASD---ERIKQ--IAL-----VMCAHRYDNC--LQPDFVGSYDI------GKYVFFFFRETAVEYINCGKSVFSR 69 (378)
Q Consensus 8 ~~l~v~~~---~~~~~--~~~-----~~rt~~~ds~--~~p~FV~sf~~------~d~VYFfF~E~a~e~~~~~~~~~sR 69 (378)
+.||.|+. ..+.. +++ .+||+ ++ |||+||+|+.+ ||||||||||++.|++..++.++||
T Consensus 141 g~LYs~t~~~~f~g~~p~i~R~~g~~~lrt~---~~wL~eP~FV~s~~i~~~~~~~d~VYFFFrE~a~e~~~~~~~~~SR 217 (590)
T 3nvq_A 141 DEVYSTIRKQEYNGKIPRFRRIRGESELYTS---DTVMQNPQFIKATIVHQDQAYDDKIYYFFREDNPDKNPEAPLNVSR 217 (590)
T ss_dssp TEEEECSCSSTTCCSCCCCEEEESSSCEECC---TTSCSSCEEEEEEEECCSSGGGCEEEEEEEEECSCCCTTSCSEEEE
T ss_pred CceeeeeeeccccCCCceeEEcCCCCccccc---cchhcCCceeEEEeccccCCCCCEEEEEecccccccccccceeeee
Confidence 67899983 22222 333 35666 56 99999999987 5899999999999998888889999
Q ss_pred EeeccccccCCcc-cccccceeeeeeeeeccCCCCCCcccceeeeEEeecC-----CCcEEEEEEecccCCCCceeeeee
Q psy10772 70 VARVCKRDTGGKN-ILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG-----DDTKFYGVFTTSTTGLMGSAICSF 143 (378)
Q Consensus 70 VaRVCk~D~GG~~-~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~~-----~~~~ly~vFtt~~~~~~~SAVC~y 143 (378)
||||||||.||.+ +|+++||||+||||+|+.||. ++|||+|||||++++ ++++|||||++++ ++||||+|
T Consensus 218 VARVCknD~GG~~~ll~~~WTSFlKarL~Cs~pg~-~~~FN~LQ~a~~~~~~~~~~~~~vlYgVFt~~~---~~SAVCaf 293 (590)
T 3nvq_A 218 VAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDAAT-NKNFNRLQDVFLLPDPSGQWRDTRVYGVFSNPW---NYSAVCVY 293 (590)
T ss_dssp EEEEETTCCCBSSTTTTTBCSCCEEEEBCCBCTTT-CCBCCEEEEEEEECCTTCCGGGCEEEEEEECTT---CCEEEEEE
T ss_pred eeeecCCCccccchhhhcceeEEEEEEEECCCCCC-CCCccceeeEEEccccCCCCCCCEEEEEEecCC---CCceEEEe
Confidence 9999999999986 569999999999999999975 789999999999875 3579999999764 57999999
Q ss_pred eHHHHHHHhccccccccCCCCceeeccCCCCCCCCCCCCCCCCCCCCcccceeeccccCcccccccCC--CceeEEecCC
Q psy10772 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRD--NKPVFYRRDL 221 (378)
Q Consensus 144 sl~dI~~~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~s~~~pd~~l~fi~~hpLm~~~V~P~~--~~Pll~~~~~ 221 (378)
+|+||+++|+|+ +|.. |.+++|.||||+|++++..+||++++|++.||||+++|.|++ +.|||. .+.
T Consensus 294 sl~dI~~~F~~~---------~~~~-y~~~vp~prPg~C~~~s~~~pd~~l~f~~~hplM~~~v~p~~p~~~pL~~-~~~ 362 (590)
T 3nvq_A 294 SLGDIDKVFRTS---------SLKG-YHSSLPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRVEPMGPLKTPLFH-SKY 362 (590)
T ss_dssp EHHHHHHHHHHC---------CBTT-CCSCCCSSCTTCCCSSSCCBCHHHHHHHHHCCBBSSCBCCSSSSCCCSEE-ESS
T ss_pred eHHHHHHHHhcC---------ceee-ecCCCCCCCCCcCcCCCCCCcccccchhhcccccccccCCCCccccceEe-cCC
Confidence 999999999964 2333 467899999999999888999999999999999999999987 678886 567
Q ss_pred cceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE--------------------------------------------
Q psy10772 222 LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-------------------------------------------- 257 (378)
Q Consensus 222 ~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-------------------------------------------- 257 (378)
+||+||||+|++.+ +.+|+|+||||++|+||||
T Consensus 363 ~~T~IaVd~v~a~~---g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~ 439 (590)
T 3nvq_A 363 HYQKVAVHRMQASH---GETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQW 439 (590)
T ss_dssp CEEEEEEEEEECTT---SCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSS
T ss_pred cEEEEEEEEEeccC---CCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecc
Confidence 89999999998875 5699999999999999976
Q ss_pred -----------------------------------------eceeeeeccCCCC-Cccccc----ccceeEEEEeCCeee
Q psy10772 258 -----------------------------------------KVRLLQDVSNTSD-SICESS----VGRLKQTVTWGQSVH 291 (378)
Q Consensus 258 -----------------------------------------~~~~lqd~~~~~~-~~C~~~----~~~k~~~~~~G~s~~ 291 (378)
...|+||+.++++ .+|.+. ...|.+++.+|++++
T Consensus 440 ~V~qVPl~~C~~y~~sC~~Cl~ArDPYCGWc~~~C~~~~~~~~~~~Qdv~~~~~~~~C~~~~~~~~~~~~v~~~~~~~~~ 519 (590)
T 3nvq_A 440 EVSQVPLDLCEVYGGGCHGCLMSRDPYCGWDQGRCISIYSSERSVLQSINPAEPHKECPNPKPDKAPLQKVSLAPNSRYY 519 (590)
T ss_dssp EEEEEETTCCTTCCSHHHHHHHTCCTTEEEETTEEEETTSSSSCCBCCCSSSCTTTTSSSSSCCCCCEEEEEECTTCCEE
T ss_pred eEEEcchhhccccccchhHHhcCCCCCCCCccccceecCCCCCcceeeccCCCchhhcCCCccCCccceEEEEccCCceE
Confidence 1347899999997 889842 245789999999999
Q ss_pred eeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC----eeeEEEeee
Q psy10772 292 LSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN----TVLCTHNLT 364 (378)
Q Consensus 292 L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~----~~l~~~~~~ 364 (378)
|+|.++|+.| ++.|++++.. +.. .+.++..+++||||++++.+|+|.|.|++.| +++++|.|.
T Consensus 520 L~C~~~S~~A----~~~W~~~~~~-----~~~-~~~~~~~~~~~lli~~~~~~~~G~Y~C~~~E~gf~~~~~~y~l~ 586 (590)
T 3nvq_A 520 LSCPMESRHA----TYSWRHKENV-----EQS-CEPGHQSPNCILFIENLTAQQYGHYFCEAQEGSYFREAQHWQLL 586 (590)
T ss_dssp EEEECCCTTS----EEEEEETTEE-----EEE-ECTTCSSSEEEEEESSCCSTTCEEEEEEEESSSCEEEEEEEEEE
T ss_pred eeCCCCCCcc----eeEEEeCCCc-----ccc-ccccccccccEEEEeccChhhCcEEEEEEEECCceEEEEEEEEe
Confidence 9999987755 7899998754 321 2234566789999999999999999999988 999999994
No 3
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=100.00 E-value=7.7e-71 Score=571.05 Aligned_cols=246 Identities=41% Similarity=0.729 Sum_probs=225.0
Q ss_pred CeEEEEEccccce----eee------eeccccccCC--CCCceEEEEEeCCEEEEEEEeccccccccCceeeeeEeeccc
Q psy10772 8 RSLYVASDERIKQ----IAL------VMCAHRYDNC--LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCK 75 (378)
Q Consensus 8 ~~l~v~~~~~~~~----~~~------~~rt~~~ds~--~~p~FV~sf~~~d~VYFfF~E~a~e~~~~~~~~~sRVaRVCk 75 (378)
+.||.|+..+-.. +++ .+||++||++ |||+||++|.+||||||||+|+++|++.++|.++||||||||
T Consensus 165 g~LYsgt~~dF~g~d~~I~Rs~g~~~~lRT~~~~s~wLneP~FV~a~~~~d~VYFfF~E~a~E~~~~~k~~~sRVARVCk 244 (565)
T 3oky_B 165 GKLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCK 244 (565)
T ss_dssp TEEEEEEESSTTCCCEEEEEECTTSCCEECCTTCTTTCSSCEEEEEEEETTEEEEEEEEECGGGSSSSCCEEEEEEEEET
T ss_pred CEEEEEEecccCCCCceEEecCCCCCceeeeccchhhhcCCceeEEEeeCCEEEEEEccccccccccCcceeeeEeeeCC
Confidence 6799999664332 232 5899999999 999999999999999999999999999999999999999999
Q ss_pred cccCC-cccccccceeeeeeeeeccCCCCCCcccceeeeEEee--cCCCcEEEEEEecccCCCCceeeeeeeHHHHHHHh
Q psy10772 76 RDTGG-KNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152 (378)
Q Consensus 76 ~D~GG-~~~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~--~~~~~~ly~vFtt~~~~~~~SAVC~ysl~dI~~~F 152 (378)
||.|| +++|+++|||||||||+|+.||+.++|||+||||+.+ ...+++||||||++|+++.+||||+|+|+||+++|
T Consensus 245 ~D~GG~~r~L~~~WtSFlKarL~Cs~pg~~~~~fn~lQav~~~~~~~~~~~~YgvFtt~~~~~~~SAVC~y~l~dI~~~F 324 (565)
T 3oky_B 245 NDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVF 324 (565)
T ss_dssp TCCCCCSSSSTTBCSSCEEEEBCCEECSSSCEECCEEEEECCCEEETTEEEEEEEEECCSSSSCCEEEEEEEHHHHHHHT
T ss_pred CCCCCcccccccceeEEEEEEEEcCCCCCCCccccceeeeeeeeccCCCCEEEEEEccCCCCCCccEEeeccHHHHHHHh
Confidence 99999 6999999999999999999999889999999999743 23467999999999999999999999999999999
Q ss_pred ccccccccCCCCceeeccCCCCCCCCCCCCCCC--------CCCCCcccceeeccccCcccccccCCCceeEEecCC--c
Q psy10772 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDL--L 222 (378)
Q Consensus 153 ~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~--------s~~~pd~~l~fi~~hpLm~~~V~P~~~~Pll~~~~~--~ 222 (378)
+|+||++++++++|++++.++||+||||+|+++ ++++||++|+|+|.||||+++|+|+.++|||++++. +
T Consensus 325 ~G~fk~~~~~~~~W~~~~~~~vP~PrPg~C~~~~~~~~~~ss~~lpd~~L~fik~hPLM~~~V~p~~~~Pll~~~~~~y~ 404 (565)
T 3oky_B 325 TGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYR 404 (565)
T ss_dssp TSCBEEESSTTSCEEECCGGGSCSSCTTCCTTSSTTTTCSSGGGCCHHHHHHHHHCCBBSSCBCCGGGSCSEEECSSSSC
T ss_pred cCCcccccCCCcceEecCCCcCCCCCCCcccCCCccccccccccCCHHHhhHhhhCcccccCCCCccceeEEEEcCCccc
Confidence 999999999999999988899999999999975 357999999999999999999999999999999875 5
Q ss_pred ceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE
Q psy10772 223 FTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV 257 (378)
Q Consensus 223 ~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V 257 (378)
||+||||++++. +++|+|+||||++|+||||
T Consensus 405 lT~IaVd~~~g~----~~~ytVlFLGTd~G~l~Kv 435 (565)
T 3oky_B 405 LTKIAVDNAAGP----YQNHTVVFLGSEKGIILKF 435 (565)
T ss_dssp EEEEEEEEEETT----TTCEEEEEEEETTSEEEEE
T ss_pred eEEEEEEEEecC----CCceEEEEEECCCCeEEEE
Confidence 699999998754 5899999999999999999
No 4
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=100.00 E-value=3e-65 Score=526.08 Aligned_cols=245 Identities=37% Similarity=0.690 Sum_probs=224.9
Q ss_pred CeEEEEEccccceee----------eeeccccccCC--CCCceEEEEEe-------CCEEEEEEEeccccccccCceeee
Q psy10772 8 RSLYVASDERIKQIA----------LVMCAHRYDNC--LQPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFS 68 (378)
Q Consensus 8 ~~l~v~~~~~~~~~~----------~~~rt~~~ds~--~~p~FV~sf~~-------~d~VYFfF~E~a~e~~~~~~~~~s 68 (378)
+.||||+..+....+ ..+||+++|++ ++|+||++|.+ ++||||||+|++.|.+++++.++|
T Consensus 159 ~~LY~gt~~d~~g~~~~i~rsl~~~~~lrT~~~d~~~l~~p~FV~s~~i~~~~~~~~~~VYFff~e~~~e~~~~~~~~~S 238 (495)
T 1q47_A 159 GELYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHA 238 (495)
T ss_dssp TEEEEEEECSTTSCCEEEEEEESSSCCEECCSSCTTTCSSCEEEEEEEECCSSSGGGCEEEEEEEEECCCCSSCCCCEEE
T ss_pred CeEEEEEeccCCCCCcceeeecCccccccccccCcccccCcceEEEEEecccccCCCCEEEEEEEeecccccccCcceEE
Confidence 689999987765432 25699999999 99999999976 599999999999999888999999
Q ss_pred eEeeccccccCCcccccccceeeeeeeeeccCCCCC--CcccceeeeEEeecC---CCcEEEEEEecccCCCCceeeeee
Q psy10772 69 RVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF--PFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICSF 143 (378)
Q Consensus 69 RVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~--~~~fn~lq~v~~~~~---~~~~ly~vFtt~~~~~~~SAVC~y 143 (378)
|||||||+|.||+++|+++||||+||||+|+.||+. +++||+|||||+++. ++++|||||+++++++++||||+|
T Consensus 239 RVaRvCk~D~GG~~~l~~~wtSflka~L~Cs~~g~~g~~~~fn~lq~v~~~~~~~~~~~vlygvFst~~~~~~~SAvC~f 318 (495)
T 1q47_A 239 RIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMY 318 (495)
T ss_dssp EEEEEETTCCCBSSSSBTBCSSCEEEEBCCEECCTTSCCEECCEEEEEEEECCSSTTCCEEEEEEECSCSSSCCEEEEEE
T ss_pred EEEEECCCCCCccccchhccceEEEEEEEccCCCCCCCccccCceeeEEEeccCCCCCcEEEEEEecCCCCCCCcEEEEe
Confidence 999999999999999999999999999999999875 689999999999864 368999999999999999999999
Q ss_pred eHHHHHHHhccccccccCCCCceeeccCCCCCCCCCCCCCCC-------CCCCCcccceeeccccCcccccccCCCceeE
Q psy10772 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETLPDSVLNFIRSHPLMDEAVAHRDNKPVF 216 (378)
Q Consensus 144 sl~dI~~~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~-------s~~~pd~~l~fi~~hpLm~~~V~P~~~~Pll 216 (378)
+|+||+++|+|+|+++++++++|.++ .+++|+||||.|.+. +.++||++++|++.||||++.|.|+.++|||
T Consensus 319 ~l~~I~~~F~g~~~~~~~~~~~w~~~-~g~vp~prpg~C~~~~~~~~~~s~~~pd~~l~f~~~hpLm~~~v~pi~~~Pll 397 (495)
T 1q47_A 319 SMSDVRRVFLGPYAHRDGPNYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIM 397 (495)
T ss_dssp CHHHHHHHHTSCBEECSSTTBCCEEC-CSCCCSSCTTCCCCSSTTSCSCGGGCCHHHHHHHHTCCBBSSCBCCGGGSCSE
T ss_pred EHHHHHHHHhhhhhhccCCccceeee-cCccCCCCCCccCCCCccccccccccchhhhhhcccCccccccccccCcccEE
Confidence 99999999999999999999999985 899999999999874 4568999999999999999999999999999
Q ss_pred EecCC--cceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE
Q psy10772 217 YRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV 257 (378)
Q Consensus 217 ~~~~~--~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V 257 (378)
++.+. +||+||||++++. +++|+|+||||++|+||||
T Consensus 398 ~~~~~~~~lT~IaVd~v~~~----~~~~tV~flGT~~G~l~Kv 436 (495)
T 1q47_A 398 IKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKV 436 (495)
T ss_dssp EESSSSSCEEEEEEEEEECS----SCEEEEEEEEETTSCEEEE
T ss_pred EecCCccceEEEEEEEEccC----CCcEEEEEEeCCCcEEEEE
Confidence 98764 7999999999887 4789999999999999999
No 5
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=100.00 E-value=1.6e-62 Score=519.43 Aligned_cols=331 Identities=30% Similarity=0.546 Sum_probs=259.7
Q ss_pred CeEEEEEccccce----ee------eeeccccccCC--CCCceEEEEEe-------CCEEEEEEEeccccccccCceeee
Q psy10772 8 RSLYVASDERIKQ----IA------LVMCAHRYDNC--LQPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFS 68 (378)
Q Consensus 8 ~~l~v~~~~~~~~----~~------~~~rt~~~ds~--~~p~FV~sf~~-------~d~VYFfF~E~a~e~~~~~~~~~s 68 (378)
+.||+|+...-.. ++ ..+||+++|++ ++|+||++|.+ +|||||||+|+++|++.+++.++|
T Consensus 167 g~LYsGT~~df~g~d~~I~Rsl~~~~~lrT~~~~s~~l~~P~FV~s~~i~~~~~~~~d~VYFFFrE~a~e~~~~~k~~~S 246 (667)
T 4gz8_A 167 GELYSGTAADFMGRDFAIFRTLGHHHPIRTEQHDSRWLNDPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHA 246 (667)
T ss_dssp TEEEEEEECSTTSCCEEEEEESCSSCCEECCSSCTTTCSSCEEEEEEEECCSSSTTSCEEEEEEEEECCCC-CCCCCEEE
T ss_pred CeEEEEeccccCCCCceEEecCCCCCcceeeecccccccCCcceeeeeecccccCCCCEEEEEEEEEeeccCCcccceee
Confidence 5799998654211 22 36799999999 99999999977 689999999999999999999999
Q ss_pred eEeeccccccCCcccccccceeeeeeeeeccCCCC--CCcccceeeeEEeecCC---CcEEEEEEecccCCCCceeeeee
Q psy10772 69 RVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICSF 143 (378)
Q Consensus 69 RVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~--~~~~fn~lq~v~~~~~~---~~~ly~vFtt~~~~~~~SAVC~y 143 (378)
|||||||||.||+++|+++||||+||||+|++||+ .+++||+||+++.+++. +++|||||+++++++++||||+|
T Consensus 247 RVaRVCknD~GG~~~L~~~wtSFlKarL~Cs~pg~~~~~~~fn~Lq~v~~~~~~~~~~~vlYaVFtt~~~~~~~SAVC~F 326 (667)
T 4gz8_A 247 RIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMY 326 (667)
T ss_dssp EEEEEETTCCCCSSSSTTBCSSCEEEEECCEECCTTSCCEECCEEEEEEEECCSCTTCCEEEEEEECSCSSSCCEEEEEE
T ss_pred eeeeeCCCCCCCccccccceeeEEEEEEEeecCCCCcccchhHhhhheeEccCCCCCCcEEEEEecCCCCCCCCcEEEEE
Confidence 99999999999999999999999999999999986 46899999999998653 57999999999999999999999
Q ss_pred eHHHHHHHhccccccccCCCCceeeccCCCCCCCCCCCCCC-------CCCCCCcccceeeccccCcccccccCCCceeE
Q psy10772 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPVF 216 (378)
Q Consensus 144 sl~dI~~~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~-------~s~~~pd~~l~fi~~hpLm~~~V~P~~~~Pll 216 (378)
+|+||+++|+|+|++++++.++|.++ .+++|.||||.|+. .+.++||++++|++.||||+++|.|+.++|+|
T Consensus 327 sL~dI~~~F~g~~k~~~~~~~~w~~~-~~~vp~prpg~c~~~~~~~~~ss~~lpd~~L~f~k~hpLm~~~V~Pi~~~Pll 405 (667)
T 4gz8_A 327 SMSDVRRVFLGPYAHRDGPNYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPIM 405 (667)
T ss_dssp EHHHHHHHHHSCBEECSSTTBCCEEC-CSCCCSSCTTCCCCSSSSCCCSSTTSCHHHHHTTTSCCBBSSCBCCGGGSCSE
T ss_pred EcHHHHHHHhhhhhcccCCCcccccc-cCCcCCCCccccCCCccCcccCcccCChhhccccccCCCcccccCCCCCCceE
Confidence 99999999999999999999999984 89999999999975 35689999999999999999999999999999
Q ss_pred EecC--CcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeee
Q psy10772 217 YRRD--LLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSC 294 (378)
Q Consensus 217 ~~~~--~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C 294 (378)
++.+ .+||+||||++++. +++|+|+||||++|+||||-...-+.. . ....+.+.+. .-
T Consensus 406 ~~~~~~~~lT~IaVd~v~~~----~g~ytVlFLGT~~G~I~Kvv~~~~~~~------~-----~~~~~~leEi-----~v 465 (667)
T 4gz8_A 406 IKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETW------H-----DLEEVLLEEM-----TV 465 (667)
T ss_dssp EECSSSCCEEEEEEEEEECS----SCEEEEEEEEETTSEEEEEEEEC-----------------CEEEEEEEE-----EC
T ss_pred EEcCcccceeEEEEEEEecC----CCcEEEEEEECCCCeEEEEEEcCCCCc------c-----ccceEEEEEE-----ee
Confidence 9875 48999999999876 578999999999999999831100100 0 0001111000 00
Q ss_pred eeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCC---eEEEEEeCCeeeEEEeeeecccccC
Q psy10772 295 FVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDA---GKYDCWLGNTVLCTHNLTVDAHSNV 371 (378)
Q Consensus 295 ~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~Ds---G~Y~C~~~~~~l~~~~~~v~~~~c~ 371 (378)
.. .+ . +|.=+. |..+.+..++.++.+++=..|+.+.. -+-.|.+..++.|.|+= ..|.|.
T Consensus 466 ~~-~~-~----pI~~L~---------ld~~~~~LYV~t~~~V~kVPl~~C~~y~~sC~~Cl~ArDPYCGW~~--~~Csr~ 528 (667)
T 4gz8_A 466 FR-EP-T----TISAME---------LSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYCAWDG--SSCSRY 528 (667)
T ss_dssp SS-SC-C----CCCEEE---------EETTTTEEEEEBSSCEEEEESCCGGGSCSSHHHHHHTCCTTEECCS--SSCEEC
T ss_pred cC-CC-c----eeeeEE---------EcCCCCEEEEEECCEEEEEEhhhccCccccHHHHhcCCCCCCCCcc--CcCeeE
Confidence 00 01 1 121000 11011223556788888888887752 25679999999999983 666666
Q ss_pred CCCCC
Q psy10772 372 ADAPT 376 (378)
Q Consensus 372 ~~~~~ 376 (378)
.|+..
T Consensus 529 ~~~~~ 533 (667)
T 4gz8_A 529 FPTAK 533 (667)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 77654
No 6
>3nvx_A Protein A39; beta-propeller, viral protein; HET: NAG; 2.00A {Vaccinia virus} PDB: 3nvn_A*
Probab=100.00 E-value=1.5e-58 Score=454.02 Aligned_cols=223 Identities=21% Similarity=0.387 Sum_probs=190.7
Q ss_pred CeEEEEEccccce---eee-------eeccccccCC--CCCceEEEEEe----CCEEEEEEEeccccccccCceeeeeEe
Q psy10772 8 RSLYVASDERIKQ---IAL-------VMCAHRYDNC--LQPDFVGSYDI----GKYVFFFFRETAVEYINCGKSVFSRVA 71 (378)
Q Consensus 8 ~~l~v~~~~~~~~---~~~-------~~rt~~~ds~--~~p~FV~sf~~----~d~VYFfF~E~a~e~~~~~~~~~sRVa 71 (378)
+.||.|+..+-.. +++ .+||. ++ |+|+||++|.. +|||||||+|++.|. .+.++||||
T Consensus 106 g~LYsat~~d~G~~p~i~R~~g~~~~~LrT~---d~wLn~P~FV~s~~~~~~dddkVYFFFrE~a~e~---~~~~~SRVA 179 (383)
T 3nvx_A 106 ECVLSDINISKEGIKRWRRFDGPCGYDLYTA---DNVIPKDGLRGAFVDKDGTYDKVYILFTDTIGSK---RIVKIPYIA 179 (383)
T ss_dssp TEEEECSCSSTTCCCCCEECSBTTBSCEECC---TTSSCTTCCSEEEEEEETTEEEEEEEEEEEECSS---SCEEEEEEE
T ss_pred CeEEEEEcccCCCCceEEecCCCCCcccccc---ccccCCcceeEEEccccCCCCEEEEEEEeecccc---cceeeehhh
Confidence 5688887554211 122 23443 45 99999999974 699999999999764 256899999
Q ss_pred eccccccCCccccc-ccceeeeeeeeeccCCCCCCcccceeeeEEeecCCCcEEEEEEecccCCCCceeeeeeeHHHHHH
Q psy10772 72 RVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150 (378)
Q Consensus 72 RVCk~D~GG~~~L~-~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~~~~~~ly~vFtt~~~~~~~SAVC~ysl~dI~~ 150 (378)
||||||.||+++|+ ++|||||||||+|++||.. +||++|++++.+.++++|||+||+++ .+||||+|+|+||++
T Consensus 180 RVCknD~GG~~~L~~~kWTSFLKArL~Cs~pG~~--~~nllq~~~~~~~~~~vlYgvFss~~---~~SAVC~ysl~dI~~ 254 (383)
T 3nvx_A 180 QMCLNDEGGPSSLSSHRWSTFLKVELECDIDGRS--YRQIIHSRTIKTDNDTILYVFFDSPY---SKSALCTYSMNTIKQ 254 (383)
T ss_dssp EEETTCCCCSSGGGTTBCSSCEEEEECCEETTEE--CCEEEEEEEEECSSCEEEEEEEECSS---SEEEEEEEEHHHHHH
T ss_pred hcCccCCCCcccchhcceeeEEEEEEECCCCCcc--cccEEEEEEecCCCCcEEEEEecCCC---CCcEEEeeeHHHHHH
Confidence 99999999998875 9999999999999999853 78999999987666789999999864 689999999999999
Q ss_pred HhccccccccCCCCceeeccCCCCCCCCCCCCCCCCCCCCcccceeeccccCcccccccCCCceeEEecCCcceEEEEEE
Q psy10772 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDV 230 (378)
Q Consensus 151 ~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~s~~~pd~~l~fi~~hpLm~~~V~P~~~~Pll~~~~~~~T~IaVd~ 230 (378)
+|+|++++ . +++++|+||||+|.+++..+||++++|+|.||||+++|+|++++|+|+ .+.+||+||||+
T Consensus 255 ~F~g~~~~---------~-~~~~vP~PRPG~C~~~~~~lpd~tl~fik~hpLMd~~V~P~~~~Pl~~-~~~~ft~IaVD~ 323 (383)
T 3nvx_A 255 SFSTSKLE---------G-YTKQLPSPAPGICLPAGKVVSHTTFEVIEKYNVLDDIIKPLSNQPIFE-GPSGVKWFDIKE 323 (383)
T ss_dssp HHHHCCBT---------T-CCSCCCSSCTTCCCCTTCCCCHHHHHHHHHCCEEEEEECCGGGSCSEE-EETTCCEEEEEE
T ss_pred HhcCCccc---------c-cCCCCCCCCCCcccCCCCCCChHHHHHHHhCcccccccCCCCCCceEe-cCcceEEEEEEE
Confidence 99998653 2 478999999999999988899999999999999999999999999999 678999999999
Q ss_pred EEeeeecCCCeEEEEEEECCCeeEEEEe
Q psy10772 231 VQYEVFGTTSEYIVYFAATTTLRTVFVK 258 (378)
Q Consensus 231 v~~~~~~~~~~ytV~flGT~~G~v~~V~ 258 (378)
+++. ++.|+||||||+ .|++.+
T Consensus 324 v~~~----~~~y~VlflgTn--~~~~~~ 345 (383)
T 3nvx_A 324 KENE----HREYRIYFIKEN--SIYSFD 345 (383)
T ss_dssp CSSS----TTCEEEEEEETT--EEEEEE
T ss_pred EcCC----CCeEEEEEEecc--cceecc
Confidence 8874 699999999999 577663
No 7
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=100.00 E-value=3.5e-49 Score=410.43 Aligned_cols=194 Identities=18% Similarity=0.340 Sum_probs=170.1
Q ss_pred CCceEEEEEeCCEEEEEEEeccc-----cccccCceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCCCCcccc
Q psy10772 35 QPDFVGSYDIGKYVFFFFRETAV-----EYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFN 109 (378)
Q Consensus 35 ~p~FV~sf~~~d~VYFfF~E~a~-----e~~~~~~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~~~~fn 109 (378)
+|+||++|+.++||||||+|.+. |++.+++.++||||||||+|. +||||+||||+|+.|| .+||
T Consensus 210 ~~~fV~aF~~~~~VYF~~~e~~~~~~~~e~~~~~~~~~SRvaRvCk~D~--------~wtSflka~L~Cs~~g---~~fn 278 (539)
T 3al9_A 210 DIFYIYGFASGGFVYFLTVQPETPDGMAINSAGDLFYTSRIVRLCKDDP--------KFHSYVSLPFGCTRAG---VEYR 278 (539)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCC----------CBEEEEEEEEESSCT--------TCTTCEEEEEEEEETT---EEEE
T ss_pred CcceEEEEecCCEEEEEEEecccccccccccccccceeeEEEEEcCCcc--------ccceEEEEEeecCCCC---cCcc
Confidence 68899999999999999999875 555678999999999999997 5999999999999987 4899
Q ss_pred eeeeEEeecC------------CCcEEEEEEeccc----CCCCceeeeeeeHHHHHHHhccc----cccccCCCCceeec
Q psy10772 110 EIQDIYKVPG------------DDTKFYGVFTTST----TGLMGSAICSFSIEDIERAFVGK----FKEQATSTSAWLPV 169 (378)
Q Consensus 110 ~lq~v~~~~~------------~~~~ly~vFtt~~----~~~~~SAVC~ysl~dI~~~F~g~----f~~~~~~~~~w~~~ 169 (378)
+|||||+++. ++++|||||++++ +++++||||+|+|+||+++|+|+ |+++...+..|+.
T Consensus 279 ~lqa~~~~~~g~~La~~l~~~~~~~vlygvFs~~~~~~~~~~~~SAvC~f~l~~I~~~F~~~~~~cf~~~~~~~~~w~~- 357 (539)
T 3al9_A 279 LLQAAYLAKPGEALAQAFNISSDEDVLFAIFSKGQKQYHHPPDDSALCAFPIRAINLQIKERLQSCYHGEGNLELNWLL- 357 (539)
T ss_dssp EEEEEEEECCCHHHHHHHTCCTTSCEEEEEEEEBSBCSSSCCSCEEEEEEEHHHHHHHHHHHHHHHHTTCSBCCCHHHH-
T ss_pred hhheeeeccccccchhhcccCCCCCEEEEEEecCccccCCCCCCCEEEEEEHHHHHHHHHhhHHhhhccCCccccceec-
Confidence 9999998643 4789999999864 57889999999999999999987 6777667788973
Q ss_pred cCCCCCCCCCCCCCCCCCCCCcccceeeccccCcccccccCCCceeEEecCCcceEEEEEEEEeeeecCCCeEEEEEEEC
Q psy10772 170 LSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249 (378)
Q Consensus 170 ~~~~vP~prpg~C~~~s~~~pd~~l~fi~~hpLm~~~V~P~~~~Pll~~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT 249 (378)
++||.|.+.+..++|++++|++.||||. +.|+.++|+|++.+.+||+|+|+. .++|+|+||||
T Consensus 358 -------~~pg~C~~~~~~~~d~~~~~~~~~pL~~--~~p~~~~pl~~~~~~~lT~vav~~--------~~~~tV~flGT 420 (539)
T 3al9_A 358 -------GKDVQCTKAPVPIDDNFCGLDINQPLGG--STPVEGLTLYTTSRDRLTSVASYV--------YNGYSVVFVGT 420 (539)
T ss_dssp -------CSCCBCCCCCCCCCTTCCCCSSSCSBCC--SSCEECEEEEEESSSCEEEEEEEE--------ETTEEEEEEEE
T ss_pred -------CCCCCCcCCCCCCccccccccccccccc--cccccccceEEecccceEEEEeec--------cCCeEEEEEEc
Confidence 4789999988889999999999999994 679999999999989999999987 47899999999
Q ss_pred CCeeEEEE
Q psy10772 250 TTLRTVFV 257 (378)
Q Consensus 250 ~~G~v~~V 257 (378)
++|+||||
T Consensus 421 ~~G~l~KV 428 (539)
T 3al9_A 421 KSGKLKKI 428 (539)
T ss_dssp TTSEEEEE
T ss_pred CCCeEEEE
Confidence 99999998
No 8
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=403.80 Aligned_cols=216 Identities=15% Similarity=0.276 Sum_probs=176.4
Q ss_pred cCeEEEEEcccccee---e--ee--------------------eccccccCCCCCceEEEEEeCCEEEEEEEeccccccc
Q psy10772 7 HRSLYVASDERIKQI---A--LV--------------------MCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYIN 61 (378)
Q Consensus 7 ~~~l~v~~~~~~~~~---~--~~--------------------~rt~~~ds~~~p~FV~sf~~~d~VYFfF~E~a~e~~~ 61 (378)
...||||++.+.... . .+ +||+ |+++++|+||++|..|+||||||+|++.|..
T Consensus 147 ~~~LyvGt~~d~~~~~~~~p~Is~R~L~~~~~~~~F~~~~~~~l~t~-~~~~~~~~FV~aF~~~~~VYF~f~e~~~~~~- 224 (528)
T 3ol2_B 147 EPLLFVGRGYTSRGVGGGIPPITTRALWPPDPQAAFSYEETAKLAVG-RLSEYSHHFVSAFARGASAYFLFLRRDLQAQ- 224 (528)
T ss_dssp CEEEEEEECCCC---CCCCCSEEEEESSCSSGGGTTCEEEEEECCCS-CHHHHCCEEEEEEEETTEEEEEEEEECTTST-
T ss_pred ceEEEEEEeccCCCccCCCcceEEeecCCccccccccccccceeEec-ccccCCCcEEEEEecCCEEEEEEEEEccccc-
Confidence 369999999988751 1 22 3342 4555899999999999999999999998875
Q ss_pred cCceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCCCCcccceeeeEEeecC----CCcEEEEEEecccCCC--
Q psy10772 62 CGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG----DDTKFYGVFTTSTTGL-- 135 (378)
Q Consensus 62 ~~~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~~----~~~~ly~vFtt~~~~~-- 135 (378)
++.++||||||||+|.. |+||+||||+|+.+ +||+|||||+++. ++++|||||+++++.+
T Consensus 225 -~~~~~sRvaRvCk~D~~--------w~Sy~k~~L~C~g~-----~fn~lQaa~~~~~g~~l~~~vly~vFs~~~~~~~~ 290 (528)
T 3ol2_B 225 -SRAFRAYVSRVCLRDQH--------YYSYVELPLACEGG-----RYGLIQAAAVATSREVAHGEVLFAAFSSAAPPTVG 290 (528)
T ss_dssp -TCCEEEEEEEEESSCSS--------CTTCEEEEEESTTT-----TSCEEEEEEEEEC---CCCSEEEEEEECBCCC---
T ss_pred -ccccccceeeeeCCCCC--------eeEEEEEEEecCCC-----CCCceeEEEEccCCCccCCCEEEEEEecCCCCccc
Confidence 68899999999999994 99999999999943 7999999999874 2689999999988765
Q ss_pred ----------CceeeeeeeHHHHHHHhccccccc--------cCCCCceeeccCCCCCCCCCCCCCCCCCCCCccccee-
Q psy10772 136 ----------MGSAICSFSIEDIERAFVGKFKEQ--------ATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNF- 196 (378)
Q Consensus 136 ----------~~SAVC~ysl~dI~~~F~g~f~~~--------~~~~~~w~~~~~~~vP~prpg~C~~~s~~~pd~~l~f- 196 (378)
.+||||+|+|++|+++|+|+|+++ ++....|++ +||||.|++.+.+. ..+|
T Consensus 291 ~~~~~~~~p~~~SAVC~f~l~~I~~~f~~~~~~Cy~~~~~~~~~~~~~~~p-------~~~~~~C~~~~~~~---~~~f~ 360 (528)
T 3ol2_B 291 RPPSAAAGASGASALCAFPLDEVDRLANRTRDACYTREGRAEDGTEVAYIE-------YDVNSDCAQLPVDT---LDAYP 360 (528)
T ss_dssp --CCBCCGGGCCEEEEEEEHHHHHHHHHHHHHHHHHSTTTCSSSCCCEEEC-------TTCSCCCCCCCTTH---HHHCT
T ss_pred cccccccCCCCccEEEEEEHHHHHHHHhhhhhhhhccccccccCCccccee-------cCCCCCCCCCCccc---ccccc
Confidence 789999999999999999997641 223456754 57999999876432 2334
Q ss_pred ----eccccCcccccccCCCceeEEecCCcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEe
Q psy10772 197 ----IRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVK 258 (378)
Q Consensus 197 ----i~~hpLm~~~V~P~~~~Pll~~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~ 258 (378)
...||||++ .|+.++|+|++.+.+||+||||++ ..|+|+||||++|+||||-
T Consensus 361 Cg~~~~~~pL~~~--~p~~~~Pll~~~~~~lT~IaVd~~--------~g~tV~FlGT~~G~l~Kv~ 416 (528)
T 3ol2_B 361 CGSDHTPSPMASR--VPLEATPILEWPGIQLTAVAVTME--------DGHTIAFLGDSQGQLHRVY 416 (528)
T ss_dssp TCCTTSCCSEEES--SCEECCCSEEETTCCEEEEEEEEE--------TTEEEEEEEETTSEEEEEE
T ss_pred ccccCcCCccccc--ccccccceEEecCCceEEEEEEee--------cCeEEEEEECCCCeEEEEE
Confidence 247999987 499999999999999999999985 3499999999999999993
No 9
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=100.00 E-value=3.1e-48 Score=411.21 Aligned_cols=223 Identities=18% Similarity=0.307 Sum_probs=188.6
Q ss_pred ccCeEEEEEccccceee---eeecccccc------------------------------CCCCCceEEEEEeCCEEEEEE
Q psy10772 6 THRSLYVASDERIKQIA---LVMCAHRYD------------------------------NCLQPDFVGSYDIGKYVFFFF 52 (378)
Q Consensus 6 ~~~~l~v~~~~~~~~~~---~~~rt~~~d------------------------------s~~~p~FV~sf~~~d~VYFfF 52 (378)
...+||||+++++++.+ .++|..+-+ +.+.++||++|+.|+||||||
T Consensus 147 ~~~~l~Vg~~~~~~~~~~p~ISsR~L~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~s~~~~y~i~fV~aF~~~~fVYFlf 226 (681)
T 3oky_A 147 EDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLALVSHFDIFYIYGFASGGFVYFLT 226 (681)
T ss_dssp CCCEEEEEECCTTCTTTSCSEEEEECCSSTTCTTTTCBSCCCSSCCSEECCCHHHHHHSTTCCCEEEEEEEETTEEEEEE
T ss_pred CceeEEEEeecCCCCCCCceeEEeecccccccccccccccccccccceeeeeccccccccccccceEEEEEcCCEEEEEE
Confidence 34699999999888633 343333210 126799999999999999999
Q ss_pred Eecccccc-----ccCceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCCCCcccceeeeEEeec---------
Q psy10772 53 RETAVEYI-----NCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVP--------- 118 (378)
Q Consensus 53 ~E~a~e~~-----~~~~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~--------- 118 (378)
+|++.+.. ..++.++||||||||+|. +||||+||||+|+.+|. +||+|||||+++
T Consensus 227 ~q~~~~~~~~~~~~~~~~~~SRVaRvCk~D~--------~wtSylka~L~C~~~g~---~fn~lQaa~~~~pg~~LA~~l 295 (681)
T 3oky_A 227 VQPETPDGMAINSAGDLFYTSRIVRLCKDDP--------KFHSYVSLPFGCTRAGV---EYRLLQAAYLAKPGEALAQAF 295 (681)
T ss_dssp EEECCC----------CCEEEEEEEEESSCT--------TCTTCEEEEEEEEETTE---EECEEEEEEEECCCHHHHHHH
T ss_pred EeecccccccccccccceeeEEEEEecCCCC--------CeeEEEEEEEecCCCCc---CCCceeEEEeccCcchhhhhc
Confidence 99988752 234689999999999996 59999999999999864 799999999874
Q ss_pred ---CCCcEEEEEEecccC----CCCceeeeeeeHHHHHHHhccc----cccccCCCCceeeccCCCCCCCCCCCCCCCCC
Q psy10772 119 ---GDDTKFYGVFTTSTT----GLMGSAICSFSIEDIERAFVGK----FKEQATSTSAWLPVLSSRVPEPRPGQCVNDTE 187 (378)
Q Consensus 119 ---~~~~~ly~vFtt~~~----~~~~SAVC~ysl~dI~~~F~g~----f~~~~~~~~~w~~~~~~~vP~prpg~C~~~s~ 187 (378)
.++++|||||+++++ ++++||||+|+|+||+++|++. |+++...+..|+. |+|+.|++.+.
T Consensus 296 g~~~~~~vlygVFs~~~~~~~~~~~~SAVCaF~l~~I~~~f~~~~~~Cy~~~~~~~~~w~~--------~~~~~C~~~~~ 367 (681)
T 3oky_A 296 NISSDEDVLFAIFSKGQKQYHHPPDDSALCAFPIRAINLQIKERLQSCYHGEGNLELNWLL--------GKDVQCTKAPV 367 (681)
T ss_dssp TCCTTSCEEEEEEESBSSCSSSCCSCEEEEEEEHHHHHHHHHHHHHHHHTTCSBCCCHHHH--------SSCCBCCCCCC
T ss_pred ccCccCCEEEEEEecCCcCCCCCCCceEEEEEEHHHHHHHHhhhhhhhhcCCCCCCccccc--------CCCCCCcCCCc
Confidence 247899999999763 5679999999999999999987 8888777888962 58899999988
Q ss_pred CCCcccceeeccccCcccccccCCCceeEEecCCcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE
Q psy10772 188 TLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV 257 (378)
Q Consensus 188 ~~pd~~l~fi~~hpLm~~~V~P~~~~Pll~~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V 257 (378)
++||++++|++.||||+. .|+.++|||++.+.+||+|||+. .++|+|+||||++|+||||
T Consensus 368 ~~~d~~c~~~~~~pL~~~--~pi~~~Pll~~~~~~lT~VaV~~--------~~~~tVlFLGT~~G~l~Kv 427 (681)
T 3oky_A 368 PIDDNFCGLDINQPLGGS--TPVEGLTLYTTSRDRLTSVASYV--------YNGYSVVFVGTKSGKLKKI 427 (681)
T ss_dssp CCCTTCCCCSSSCSBCCS--SCEECEEEEEESSSCBCCCEEEE--------ETTEEEEEEEBTTSEEEEE
T ss_pred CCCccccccccccccccc--ccccccceEEecCcceEEEEEEe--------cCceEEEEEECCCceEEEE
Confidence 999999999999999986 58999999999989999999997 3789999999999999998
No 10
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.3e-47 Score=394.25 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=186.5
Q ss_pred CeEEEEEccccceee------eeeccccccC------------------CCCCceEEEEEeCCEEEEEEEeccccccccC
Q psy10772 8 RSLYVASDERIKQIA------LVMCAHRYDN------------------CLQPDFVGSYDIGKYVFFFFRETAVEYINCG 63 (378)
Q Consensus 8 ~~l~v~~~~~~~~~~------~~~rt~~~ds------------------~~~p~FV~sf~~~d~VYFfF~E~a~e~~~~~ 63 (378)
+.||||+..+....+ .++|+...+. .++++||++|+.|+||||||+|.+.+. .++
T Consensus 154 ~~Lyvgt~~~~~~~~~~~~rsis~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~fV~~F~~~~~vYF~f~e~~~~~-~~~ 232 (527)
T 4fww_A 154 SYFYVASSLDAAVAASFSPRSVSIRRLKADASGFAPGFVALSVLPKHLVSYSIEYVHSFHTGAFVYFLTVQPASVT-DDP 232 (527)
T ss_dssp EEEEEEECCCHHHHSSSCCCSEEEEEBCTTSSCBCTTCEEECCCHHHHTTCCCEEEEEEEETTEEEEEEEEESSTT-SCT
T ss_pred ceEEEeeecccCCCCCccccccccccccccccccccceeEEEecccccccCCCceEeeeecCCEEEEEEEEEcccc-CCC
Confidence 569999998765432 3445543222 156899999999999999999999776 468
Q ss_pred ceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCCC--------CcccceeeeEEeec------------CCCcE
Q psy10772 64 KSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF--------PFYFNEIQDIYKVP------------GDDTK 123 (378)
Q Consensus 64 ~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~--------~~~fn~lq~v~~~~------------~~~~~ 123 (378)
+.++||||||||||.| |+||+|+||+|+.++.. .++||+|||||+.+ .++++
T Consensus 233 ~~~~SRvaRVCk~D~~--------~~Sy~e~~L~C~~~~~~~~~~~~~~~~~yn~lQ~a~~~~~g~~La~~l~~~~~~~v 304 (527)
T 4fww_A 233 SALHTRLARLSATEPE--------LGDYRELVLDCRFAPKLVPRGSPEGGQPYPVLQVAHSAPVGAQLATELSIAEGQEV 304 (527)
T ss_dssp TSEEEEEEEEESSSSC--------CTTCEEEEEEEEECC----------CEEECEEEEEEEEECCHHHHHHHTSCTTCEE
T ss_pred cccceeeeEEcccCCC--------cceEEEEEEEeeccccccccccccCCcccceeeeEeecCccchhhhhcccCCCCCE
Confidence 8999999999999998 99999999999987542 45699999999864 24789
Q ss_pred EEEEEecccCC----CCceeeeeeeHHHHHHHhccccccccCCCCceeeccCCCCCCCCCCCCCCCCCCCCcccceeecc
Q psy10772 124 FYGVFTTSTTG----LMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS 199 (378)
Q Consensus 124 ly~vFtt~~~~----~~~SAVC~ysl~dI~~~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~s~~~pd~~l~fi~~ 199 (378)
|||||+++++. +++||||+|+|+||+++|+|+|+++......|.. +.+.+|.|||+.|.+.+...++....+++.
T Consensus 305 ly~vFs~~~~~~~~~~~~SAvC~f~m~~I~~~F~~~~~~c~~~~~~~~~-~~~~~~~~~p~~c~~~~~~~~~~~~~~~~~ 383 (527)
T 4fww_A 305 LFGVFVTGKDGGPGVGPNSVVCAFPIDLLDTLIDEGVERCCESPVHPGL-RRGLDFFQSPSFCPNPPGLEALSPNTSCRH 383 (527)
T ss_dssp EEEEEECCC----CCSCSCEEEEEEHHHHHHHHHHHHHHHHSSSCCTTC-BCCCTTTSCCCBTTSCTTCSSCCTTCCGGG
T ss_pred EEEEEeCccCCCCCCCCccEEEEEEHHHHHHHHHhhhhhcccCCCCCCc-eeccCCCCCCCcCcCCCcccccccCccccc
Confidence 99999987643 4569999999999999999998876555556643 467889999999999887778888889999
Q ss_pred ccCcccccccCCCceeEE--ecCCcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEe
Q psy10772 200 HPLMDEAVAHRDNKPVFY--RRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVK 258 (378)
Q Consensus 200 hpLm~~~V~P~~~~Pll~--~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~ 258 (378)
||||...+.| +.|++. ..+.+||+|+||++ ++|||+||||++|+||||.
T Consensus 384 ~pl~~~~~~~--~~~~~~~~~~~~~~T~iav~~~--------~~~tV~FlGT~~G~l~Kv~ 434 (527)
T 4fww_A 384 FPLLVSSSFS--RVDLFNGLLGPVQVTALYVTRL--------DNVTVAHMGTMDGRILQVE 434 (527)
T ss_dssp SCEECSSCEE--EECTTTTTTTTCCEEEEEEEEE--------TTEEEEEEEETTSEEEEEE
T ss_pred CCccccCccc--CcccccccCCceEEEEEEEecc--------CCEEEEEEECCCCeEEEEE
Confidence 9999886544 445554 35688999999984 6799999999999999993
No 11
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=100.00 E-value=1.4e-45 Score=395.36 Aligned_cols=196 Identities=17% Similarity=0.286 Sum_probs=148.6
Q ss_pred CCCceEEEEEeCCEEEEEEEeccccccccCceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCC------CCcc
Q psy10772 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE------FPFY 107 (378)
Q Consensus 34 ~~p~FV~sf~~~d~VYFfF~E~a~e~~~~~~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~------~~~~ 107 (378)
++|+||++|..|+||||||+|.+.+. ++.++||||||||+|.+ ||||+||||+|+.||+ .+++
T Consensus 224 ~~~~fV~~f~~~~~vYF~f~e~~~~~---~~~~~SRvaRvCk~D~~--------wtSflka~L~Cs~~~~~~~r~~~~~~ 292 (727)
T 2uzx_B 224 YPIKYVHAFESNNFIYFLTVQRETLD---AQTFHTRIIRFCSINSG--------LHSYMEMPLECILTEKRKKRSTKKEV 292 (727)
T ss_dssp SCEEEEEEEEETTEEEEEEEEBSSTT---CSSBCCEEEEECCSSSC--------CCSCEEEEEEEEEC---------CEE
T ss_pred cCCCceeeeecCCEEEEEEeeccccc---cccceeEEEEEecCCCC--------eeEEEEEEEEecCCCcccccccCCcC
Confidence 68999999999999999999987643 58899999999999995 9999999999999975 4679
Q ss_pred cceeeeEEeec------------CCCcEEEEEEeccc----CCCCceeeeeeeHHHHHHHhccccccccCCCCceeeccC
Q psy10772 108 FNEIQDIYKVP------------GDDTKFYGVFTTST----TGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLS 171 (378)
Q Consensus 108 fn~lq~v~~~~------------~~~~~ly~vFtt~~----~~~~~SAVC~ysl~dI~~~F~g~f~~~~~~~~~w~~~~~ 171 (378)
||+|||+|+++ .++++|||||++++ +++++||||+|+|+||+++|+|+|+++....+.|.+
T Consensus 293 fn~lQa~~~~~~g~~La~~l~i~~~~~vlygVFs~~~~~~~~~~~~SAvC~f~l~~I~~~F~~~~~~~~~~~~~~~~--- 369 (727)
T 2uzx_B 293 FNILQAAYVSKPGAQLARQIGASLNDDILFAVFAQSKPDSAEPMDRSAMCAFPIKYVNDFFNKIVNKNNVRCLQHFY--- 369 (727)
T ss_dssp ECEEEEEEEECCCHHHHHHHTCCTTCCEEEEEEEEECTTSSCEEEEEEEEEEEHHHHHHHHTCC----CEECCHHHH---
T ss_pred cCceeEEeecCCchhhhhhccCCCCCCEEEEEEcCCccccCCCCCCcEEEEEEHHHHHHHHhhhHhhcCcccccccc---
Confidence 99999999974 24789999999986 678899999999999999999999987666677863
Q ss_pred CCCCCCCCCCCCCCCCCCCccccee-eccccCcccccccCCCceeEEe--cCCcceEEEEEEEEeeeecCCCeEEEEEEE
Q psy10772 172 SRVPEPRPGQCVNDTETLPDSVLNF-IRSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAA 248 (378)
Q Consensus 172 ~~vP~prpg~C~~~s~~~pd~~l~f-i~~hpLm~~~V~P~~~~Pll~~--~~~~~T~IaVd~v~~~~~~~~~~ytV~flG 248 (378)
.||||.|.+++....+..+.. ++.||||.. +|+.+.|+|.+ .+++||+|||+++ ++|||+|||
T Consensus 370 ----~p~p~~C~~~~~~~~~~~~~~~~~~~pl~~~--~~l~~~~l~~~~~~~~~lT~iav~~~--------~~~tV~flG 435 (727)
T 2uzx_B 370 ----GPNHEHCFNRTLLRNSSGCEARRDEYRTEFT--TALQRVDLFMGQFSEVLLTSISTFIK--------GDLTIANLG 435 (727)
T ss_dssp ----CCC--------------------CCCCEEES--SCEEEECTTTTTTTTSCEEEEEEEEE--------TTEEEEEEE
T ss_pred ----CCCCCcCCCCCcccccCcCcccccccccccc--CcccCccceeecccceeEEEEEEEec--------CCEEEEEEE
Confidence 478999998754211111111 367899854 46677777765 4578999999984 789999999
Q ss_pred CCCeeEEEE
Q psy10772 249 TTTLRTVFV 257 (378)
Q Consensus 249 T~~G~v~~V 257 (378)
|++|+||||
T Consensus 436 T~~G~l~Kv 444 (727)
T 2uzx_B 436 TSEGRFMQV 444 (727)
T ss_dssp ETTSCEEEE
T ss_pred cCCCeEEEE
Confidence 999999999
No 12
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=100.00 E-value=6.2e-33 Score=279.47 Aligned_cols=195 Identities=14% Similarity=0.158 Sum_probs=152.9
Q ss_pred cCeEEEEEccc-------------cceee------------eeeccccccCC--C---CC-ceEEEEEeCCEEEEEEEec
Q psy10772 7 HRSLYVASDER-------------IKQIA------------LVMCAHRYDNC--L---QP-DFVGSYDIGKYVFFFFRET 55 (378)
Q Consensus 7 ~~~l~v~~~~~-------------~~~~~------------~~~rt~~~ds~--~---~p-~FV~sf~~~d~VYFfF~E~ 55 (378)
.++||||++.+ ++..+ +.++|+++++. + ++ +||.+|+.+++|||+|.+-
T Consensus 138 ~~~lfvg~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~r~l~~~~~~~~~~~~~~~~~~fV~af~~~~~vyf~~y~y 217 (476)
T 3nvn_B 138 NNRWYLAVAATYVLPEPETASRCNPAASDHDTAIALKDTEGRSLATQELGRLKLCEGAGSLHFVDAFLWNGSIYFPYYPY 217 (476)
T ss_dssp TTEEEEEEEECCCCCCCCTTTCCCCCGGGTTEEEEEEESSSGGGCCCTTSEEEBCTTSCCEEECCCEECSSEEEEEEEEE
T ss_pred CceeEEEecccccccccccccccCCCccccccceeeccCcccccchhhhcceeeccCCCCceeeeehhcCceeEEEEEee
Confidence 46999999998 55544 23566666655 3 67 9999999999999999875
Q ss_pred cccccccCceeeeeEeeccccccCCcccccccceeeeeeeeeccCCCCCCcccceeeeEEeecCCCcEEEEEEeccc---
Q psy10772 56 AVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTST--- 132 (378)
Q Consensus 56 a~e~~~~~~~~~sRVaRVCk~D~GG~~~L~~~wtSflKarL~Cs~~g~~~~~fn~lq~v~~~~~~~~~ly~vFtt~~--- 132 (378)
.-.. ..-.++||||||||+|. + +||+|++|+|+.++.. .||+||++.+. .+|++|||||+++.
T Consensus 218 ~~~s--~~~~~~sriaRvCk~D~--------~-~sy~e~~L~C~~~~~~--~y~ll~slgi~-~~ddVLfaVFS~~~~~~ 283 (476)
T 3nvn_B 218 NYTS--GAATGWPSMARIAQSTE--------V-LFQGQASLDCGHGHPD--GRRLLLSSSLV-EALDVWAGVFSAAAGEG 283 (476)
T ss_dssp ETTT--TEECSCCEEEEEESSSS--------C-CEEEEEEECCCSSCSS--CCCEEEEEEEE-TTTTEEEEEEECCCCSS
T ss_pred cccc--CCccceeeEEEEeecCC--------C-cEEEEEEEeccCCCCC--CcceEEecCcc-CCCCEEEEEEecCCCCc
Confidence 4221 11268999999999997 3 8999999999997543 39999999775 55679999999863
Q ss_pred ---CCCCceeeeeeeHHHHHHHhccccccccCCCCceeeccCCCCCCCCCCCCCCCCCCCCcccceeeccccCccccccc
Q psy10772 133 ---TGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209 (378)
Q Consensus 133 ---~~~~~SAVC~ysl~dI~~~F~g~f~~~~~~~~~w~~~~~~~vP~prpg~C~~~s~~~pd~~l~fi~~hpLm~~~V~P 209 (378)
+++.+||||+|+|++|+++|.. + .|... .++..|..+ +|||| |+|
T Consensus 284 ~~~~p~~~SALC~F~L~~I~~~iqs----C-----~w~~~-------~~~~~Cg~~-------------n~PL~---vqP 331 (476)
T 3nvn_B 284 QERRSPTTTALCLFRMSEIQARAKR----V-----SWDFK-------TAESHCKEG-------------DQPER---VQP 331 (476)
T ss_dssp SCSCCTTSEEEEEEEHHHHHHHCBC----C-----CSSBC-------CSSCCSSSS-------------CCCEE---ECC
T ss_pred ccCCCCCCcEEEEEEHHHHHHHHhh----C-----Ccccc-------cCccccccC-------------CCcce---eec
Confidence 3678999999999999999632 2 57421 123346531 69999 789
Q ss_pred CCCceeEEecCCcceEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEe
Q psy10772 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVK 258 (378)
Q Consensus 210 ~~~~Pll~~~~~~~T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~ 258 (378)
+.+.|||.. .+|+|+|++ .++|+|+||||++|+||||-
T Consensus 332 I~~~PL~~~---~LTsVav~v--------v~~~TVlFLGTd~G~L~KVv 369 (476)
T 3nvn_B 332 IASSTLIHS---DLTSVYGTV--------VMNRTVLFLGTGDGQLLKVI 369 (476)
T ss_dssp CTTCCEEES---SEEEEEEEE--------SSSSEEEEEEETTSEEEEEE
T ss_pred cCCCCeEec---CCceEEEEE--------eCCeEEEEEECCCceEEEEE
Confidence 999999973 599999998 47899999999999999993
No 13
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.05 E-value=3.9e-10 Score=88.11 Aligned_cols=76 Identities=21% Similarity=0.343 Sum_probs=59.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|....| .|.|+|+.++.+ |. .++++.....| |.|.+++.+|+|.|.|.+.|
T Consensus 4 t~v~~~~G~~v~l~C~vs~p----~p~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 72 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSGP----GGPVRWYKDGER-----LA--SQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ 72 (84)
T ss_dssp CCEEECTTSCEEEECCCSCC----STTCEEEETTEE-----CC--CCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT
T ss_pred eEEEEecCCCEEEEEEECCC----CcEEEEEECCEE-----cc--ccccEEEeecCCeEEEEecCCCCcccEEEEEEECC
Confidence 46788999999999998543 358999998764 54 44554444344 99999999999999999987
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
+ -++..|+|.+
T Consensus 73 ~-~~~a~l~V~e 83 (84)
T 2lu7_A 73 D-SRIFLVSVEE 83 (84)
T ss_dssp T-CEEEEEEECC
T ss_pred E-EEEEEEEEEC
Confidence 4 5788888864
No 14
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.02 E-value=7.5e-10 Score=87.82 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=59.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|....++ +.|+|++++.+ |. .++++.+..+| |.|.+++.+|+|.|.|.+.
T Consensus 12 ~~~~~v~~G~~v~l~C~v~~~~----~~v~W~k~g~~-----i~--~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~ 80 (93)
T 1waa_A 12 LYGVEVFVGETAHFEIELSEPD----VHGQWKLKGQP-----LA--ASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAA 80 (93)
T ss_dssp CCCEEEETTSCEEEEEEESSSS----CCCEEEETTEE-----CC--CBTTEEEEEETTEEEEEECSCCGGGCEEEEEEET
T ss_pred CcceEEeCCCCEEEEEEECCCC----CeEEEEECCEE-----Cc--CCCCEEEEEECCEEEEEECCCChhhCEEEEEEEC
Confidence 4678899999999999986442 47999998764 43 44454444444 9999999999999999999
Q ss_pred CeeeEEEeeeecc
Q psy10772 355 NTVLCTHNLTVDA 367 (378)
Q Consensus 355 ~~~l~~~~~~v~~ 367 (378)
|. .++=.|+|.+
T Consensus 81 n~-~~sa~L~V~~ 92 (93)
T 1waa_A 81 NT-KSAANLKVKE 92 (93)
T ss_dssp TE-EEEEEEEEEC
T ss_pred CC-cEEEEEEEEc
Confidence 74 4777787764
No 15
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.98 E-value=6.8e-10 Score=88.06 Aligned_cols=72 Identities=24% Similarity=0.537 Sum_probs=55.0
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCCee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGNTV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~~~ 357 (378)
+.+.+|+++.|+|.+..| .|.|+|+.++.+ |. .++++.+..+| |.|.+++.+|+|.|.|.+.|+
T Consensus 16 v~~~~g~~v~l~C~v~~p----~~~v~W~k~g~~-----i~--~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~- 83 (91)
T 2lvc_A 16 VHAITSECVMLACEVDRE----DAPVRWYKDGQE-----VE--ESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE- 83 (91)
T ss_dssp EECCTTCCEEEEEECSCT----TSCCEEEETTSC-----CC--CCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC-
T ss_pred EEEECCCcEEEEEEECCC----CcEEEEEECCEE-----ee--eeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce-
Confidence 456789999999998543 247999998875 54 44444444344 999999999999999999864
Q ss_pred eEEEeeee
Q psy10772 358 LCTHNLTV 365 (378)
Q Consensus 358 l~~~~~~v 365 (378)
-++..|+|
T Consensus 84 ~~~~~ltV 91 (91)
T 2lvc_A 84 CAYFTVTI 91 (91)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 57777776
No 16
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.97 E-value=8.5e-10 Score=88.48 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=60.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|++++.+ |....+.++.....+ |.|.+++.+|+|.|.|.+.
T Consensus 12 p~~~~v~~G~~~~l~C~~~g~P~---p~v~W~k~g~~-----i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 12 PSDISIDEGKVLTVACAFTGEPT---PEVTWSCGGRK-----IHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESC---CEEEEEETTEE-----CCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEeCCCeEEEEEEEEEecC---CEEEEEECceE-----eeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 45688999999999999876544 68999998764 432122233333222 9999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|.+
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 7 667888888864
No 17
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.96 E-value=7.6e-10 Score=90.05 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=61.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|++++.+ |. .++++....+ -|.|.+++.+|+|.|.|.+.
T Consensus 20 p~~~~v~~G~~~~l~C~~~G~P~---p~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 20 PRPVRVVSGAEAELKCVVLGEPP---PVVVWEKGGQQ-----LA--ASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCCEEEETTSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEeCCCcEEEEEEEEEecC---CEEEEEECccc-----cc--ceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 46688999999999999876544 68999998764 43 4444443322 39999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|+|.+
T Consensus 90 N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 90 NAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEc
Confidence 7 667788888875
No 18
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=2.1e-09 Score=86.59 Aligned_cols=86 Identities=20% Similarity=0.258 Sum_probs=64.4
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEe
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~ 353 (378)
..+.+.+.+|+++.|.|.....+. ++.+.|+.++.+ |. .++++....+| |.|.+++.+|+|.|.|.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~v~~~~~--~~~v~W~k~g~~-----i~--~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 84 (104)
T 2eny_A 14 RLKTMEVLEGESCSFECVLSHESA--SDPAMWTVGGKT-----VG--SSSRFQATRQGRKYILVVREAAPSDAGEVVFSV 84 (104)
T ss_dssp CCCCEEEESSCCEEEEEECSSCCC--SSCBCCBSSSSB-----CS--BCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE
T ss_pred cCCCcEEcCCCcEEEEEEEcCCCC--CceeEEEECCEE-----CC--CCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE
Confidence 346788999999999999865432 235999988765 43 34444444444 999999999999999999
Q ss_pred CCeeeEEEeeeecccccCCC
Q psy10772 354 GNTVLCTHNLTVDAHSNVAD 373 (378)
Q Consensus 354 ~~~~l~~~~~~v~~~~c~~~ 373 (378)
.|. .++-.|+|.+.+-..+
T Consensus 85 ~~~-~~~a~L~V~~~p~~~~ 103 (104)
T 2eny_A 85 RGL-TSKASLIVRERSGPSS 103 (104)
T ss_dssp TTE-EEEECEEEECCCSSCC
T ss_pred CCe-eEEEEEEEeCCCcCCC
Confidence 864 5888999988665443
No 19
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=4.2e-09 Score=84.37 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=60.3
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEe
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~ 353 (378)
..+.+.+.+|+++.|.|.+ .| .|.|+|+.++.+ |. .++++.+..+| |.|.+++.+|+|.|.|.+
T Consensus 13 ~~~~~~v~~G~~v~l~C~v-~p----~p~v~W~k~g~~-----l~--~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 13 PLTDQTVNLGKEICLKCEI-SE----NIPGKWTKNGLP-----VQ--ESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp CCCCEEEETTSCCCEEEEC-SS----CCCEEEEETTEE-----CC--CCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred cCCceEEcCCCCEEEEEEe-CC----CCeEEEEECCEE-----CC--CCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence 3567889999999999998 33 258999998764 43 44454444444 999999999999999999
Q ss_pred CCe-eeEEEeeeeccc
Q psy10772 354 GNT-VLCTHNLTVDAH 368 (378)
Q Consensus 354 ~~~-~l~~~~~~v~~~ 368 (378)
.|. .-++-.|+|.+.
T Consensus 81 ~N~~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 81 DAYNVTLPAKVHVISG 96 (100)
T ss_dssp SSSCCCEEEEEEEECC
T ss_pred cCCCeeEEEEEEEeCC
Confidence 985 346777888754
No 20
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.85 E-value=7.2e-09 Score=81.32 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=57.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|.. +.+ .+.|+|+.++.+ |. .+.++....+| |.|.+++..|+|.|.|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~-~~p---~~~v~W~k~~~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ag 83 (95)
T 2k1m_A 15 PRSVEVAAGSPAVFEAET-ERA---GVKVRWQRGGSD-----IS--ASNKYGLATEGTRHTLTVREVGPADQGSYAVIAG 83 (95)
T ss_dssp CCCEEEETTSCEEEEEEC-SSS---SCCCEEECSSSE-----EC--SSTTCEEEEETTEEEEEESSCCTTCCSEEEEEET
T ss_pred CCcEEEeCCCcEEEEEEe-CCC---CCeEEEEECCEE-----CC--CCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEEC
Confidence 467889999999999998 333 358999988754 43 34444444444 9999999999999999996
Q ss_pred CeeeEEEeeeec
Q psy10772 355 NTVLCTHNLTVD 366 (378)
Q Consensus 355 ~~~l~~~~~~v~ 366 (378)
+ .-++..|+|.
T Consensus 84 ~-~~~~~~l~V~ 94 (95)
T 2k1m_A 84 S-SKVKFDLKVI 94 (95)
T ss_dssp T-EEEEEEEEEE
T ss_pred C-ceEEEEEEEe
Confidence 5 5567777775
No 21
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.84 E-value=7.1e-09 Score=81.32 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=60.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc---eEEeeecCCCCeEEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG---LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G---LlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+.+.+|+++.|.|...+.+. |.+.|+.++.+ +......++...++| |.|.+++..|+|.|.|.+.|
T Consensus 12 p~~~~~~~G~~~~l~C~~~g~p~---p~v~W~~~g~~-----~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 12 PENMSIDEGRFCRMDFKVSGLPA---PDVSWYLNGRT-----VQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp CCCEEEETTCCEEEEEECEEESC---CEEEEEETTEE-----ECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEecCCCEEEEEEEEEeeCC---CEEEEEECCEE-----CcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 35678899999999999875443 58999988654 431122234444554 99999999999999999987
Q ss_pred ---eeeEEEeeeeccc
Q psy10772 356 ---TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ---~~l~~~~~~v~~~ 368 (378)
..-++..|.|.+.
T Consensus 84 ~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 84 RAGEATFTVQLDVLAK 99 (100)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCeEEEEEEEEEEec
Confidence 5667777777654
No 22
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.83 E-value=4.6e-09 Score=84.04 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=64.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|.....+. +++|+.++.+ |. .++++....+| |.|.+++.+|+|.|.|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~~----~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 15 IADLTVKAAEQAVFKCEVSDEKV----TGKWYKNGVE-----VR--PSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCEEEESSCCEECCCEESCSSC----EEEEEESSCB-----CC--CCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCCeEEeCCCeEEEEEEEcCCCc----ceEEEcCCEE-----Cc--CCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEc
Confidence 46688999999999999875543 4999998764 43 34444444344 9999999999999999998
Q ss_pred Ce-eeEEEeeeecccccCCCCC
Q psy10772 355 NT-VLCTHNLTVDAHSNVADAP 375 (378)
Q Consensus 355 ~~-~l~~~~~~v~~~~c~~~~~ 375 (378)
|. .-++..|+|.+.....|.+
T Consensus 84 n~~~~~~~~l~V~~~~~~~p~s 105 (106)
T 2dlt_A 84 GYALSLSAKLNFLEIKVSGPSS 105 (106)
T ss_dssp TSCCCCCBCEEEECCCCCSCCC
T ss_pred cCCceEEEEEEEEEEeCCCCCC
Confidence 84 3466677777777666653
No 23
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.82 E-value=1e-08 Score=86.81 Aligned_cols=96 Identities=18% Similarity=0.258 Sum_probs=67.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecc------cCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSK------DKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~------~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+.++.|.|+|+.+.. +..+.+++...+.+-...+..|.|.+|+.+|+|.|.|.
T Consensus 14 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Ce 93 (126)
T 2dav_A 14 PQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCE 93 (126)
T ss_dssp CCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEE
Confidence 466889999999999998765445668999988631 11222332100111112346799999999999999999
Q ss_pred eCC---eeeEEEeeeecccccCCCC
Q psy10772 353 LGN---TVLCTHNLTVDAHSNVADA 374 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~~~c~~~~ 374 (378)
+.| ..-|..+|+|....-..|+
T Consensus 94 vsn~~g~~~~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 94 VTYKDKFDSCSFDLEVHESTGTTPN 118 (126)
T ss_dssp EECSSCEEEECCEEEEECCCCSCCC
T ss_pred EEeCCCcEEEEEEEEEEecCCCCCe
Confidence 887 6678899999985555554
No 24
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=9.1e-09 Score=86.06 Aligned_cols=90 Identities=18% Similarity=0.130 Sum_probs=63.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc------CceeeEeeccCcceEeecCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD------KGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~------~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+.++.|+|+|+.+..- ..+.+++...+.+-......|.|.+|+.+|+|.|.|.
T Consensus 19 P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Ce 98 (118)
T 2edn_A 19 PDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE 98 (118)
T ss_dssp CCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEE
T ss_pred CCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEE
Confidence 4668899999999999987654456689999886311 1122222111111112245699999999999999999
Q ss_pred eCC---eeeEEEeeeeccc
Q psy10772 353 LGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~~ 368 (378)
+.| ..-|..+|+|.+.
T Consensus 99 vsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 99 VKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EECSSCEEEEEECCEEECC
T ss_pred EEEcCCcEEEEEEEEEEcC
Confidence 887 7779999999864
No 25
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.81 E-value=8.1e-09 Score=81.60 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=59.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.+ +. .+.++..... -|.|.+++.+|+|.|.|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~---p~i~W~k~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 15 MRSHRVPCGQNTRFILNVQSKPT---AEVKWYHNGVE-----LQ--ESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp CCCEEEETTCCEEEEEEEEEESC---CEEEEEETTEE-----CC--CCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CcceEEeCCCeEEEEEEEEecCC---CEEEEEECCEE-----CC--CCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 35678899999999999875544 68999988754 32 3333333322 29999999999999999998
Q ss_pred C---eeeEEEeeeeccc
Q psy10772 355 N---TVLCTHNLTVDAH 368 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~ 368 (378)
| ..-++..|.|.+.
T Consensus 85 N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 85 NYKGEASDYATLDVTGG 101 (103)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCcEEEEEEEEEECC
Confidence 7 5677778877653
No 26
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=1.8e-08 Score=83.29 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=60.8
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc----------ceEeecCc----eEEeeecC
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK----------FIRTVDGG----LVIMAVEE 343 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~----------~~~~~~~G----LlI~~v~~ 343 (378)
..+.+.+.+|+++.|+|.+.. .|.++|++|+.+ |. .++ ++.+..+| |+|.+++.
T Consensus 14 ~l~d~~v~eG~~a~f~C~vs~-----~p~v~W~knG~~-----l~--~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~ 81 (112)
T 2e6q_A 14 GLEDVQVYDGEDAVFSLDLST-----IIQGTWFLNGEE-----LK--SNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH 81 (112)
T ss_dssp CCCCEEEETTCEEEEEEEESS-----CCCCEEEESSCB-----CC--SSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred CCCCeEEcCCCcEEEEEEECC-----CCeEEEEECCEE-----Cc--cCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence 356788999999999999963 257999999876 54 443 66665555 99999999
Q ss_pred CCCeEEEEEeCCeeeEEEeeeeccc
Q psy10772 344 LDAGKYDCWLGNTVLCTHNLTVDAH 368 (378)
Q Consensus 344 ~DsG~Y~C~~~~~~l~~~~~~v~~~ 368 (378)
+|+|.|.|..-+..-.+=.|+|.+.
T Consensus 82 ~D~G~Y~~~~~~~~~ssA~L~V~~~ 106 (112)
T 2e6q_A 82 QDSGALVGFSCPGVQDSAALTIQES 106 (112)
T ss_dssp TTCSEEEEEEETTEEEEEEEEEECS
T ss_pred HHCccEEEEEECCeeEEEEEEEeCC
Confidence 9999997743344556778888764
No 27
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.79 E-value=1.9e-08 Score=81.34 Aligned_cols=81 Identities=25% Similarity=0.318 Sum_probs=61.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee----cCceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV----DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~----~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.+ |. .+.++... ..-|.|.+++.+|+|.|.|.+.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~g~p~---p~i~W~k~~~~-----~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 14 PEDQKVRAGESVELFGKVTGTQP---ITCTWMKFRKQ-----IQ--ESEHMKVENSENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCSEEEETTCCEEEEEEEESSSS---CEEEEEESSSB-----CC--CSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCCeEEeCCCeEEEEEEEEcCCC---CEEEEEECCEE-----Cc--CCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEE
Confidence 45678899999999999976544 68999998764 32 23333332 2349999999999999999998
Q ss_pred C---eeeEEEeeeecccc
Q psy10772 355 N---TVLCTHNLTVDAHS 369 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~ 369 (378)
| ..-+...|.|.+.+
T Consensus 84 N~~g~~~~~~~l~V~~~p 101 (114)
T 2cqv_A 84 NKLGSRQAQVNLTVVDKP 101 (114)
T ss_dssp CSSCEEECCEEEEEECSC
T ss_pred ECCCcEEEEEEEEEECCC
Confidence 7 55667788877544
No 28
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.79 E-value=1.2e-08 Score=80.76 Aligned_cols=79 Identities=29% Similarity=0.421 Sum_probs=60.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|....| .+.|.|+.++.. |. .+.++....+| |.|.+++.+|+|.|.|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~----~~~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 15 LEDQWVAPGEDVELRCELSRA----GTPVHWLKDRKA-----IR--KSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp CCCEEECTTSCEEECCEESSS----SCCCCEEESSCB-----CC--CSSSEEEEEETTEEEEEESSCCTTTCSEEEEECS
T ss_pred CCccEEcCCCCEEEEEEEeCC----CCcEEEEECCEE-----cc--CCCCEEEEECCCEEEEEECCCCcccCEEEEEEEc
Confidence 456788999999999999753 247999988764 32 33444444344 9999999999999999999
Q ss_pred CeeeEEEeeeecccc
Q psy10772 355 NTVLCTHNLTVDAHS 369 (378)
Q Consensus 355 ~~~l~~~~~~v~~~~ 369 (378)
| .-.+..|+|.+.+
T Consensus 84 n-~~~~~~l~V~~~p 97 (103)
T 2edf_A 84 A-SKSTASLHVEEKA 97 (103)
T ss_dssp S-CEEEEEEEECCCS
T ss_pred c-CCcEEEEEEeCCC
Confidence 8 5677888887643
No 29
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.78 E-value=2.4e-08 Score=78.96 Aligned_cols=75 Identities=20% Similarity=0.281 Sum_probs=57.0
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCCee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGNTV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~~~ 357 (378)
+.+.+|+++.|.|.... +.+.|+|++++.+ |. .+.++....+| |.|.+++.+|+|.|.|.+. ..
T Consensus 18 ~~v~~G~~v~l~C~~~~----p~~~v~W~k~g~~-----i~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ag-~~ 85 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELAD----PKLEVKWYKNGQE-----IR--PSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAG-DE 85 (100)
T ss_dssp EEECTTEEEEEEEEESC----TTSCEEEEESSCB-----CC--CBTTEEEEEETTEEEEEEEEECTTTCCEEEEEET-TE
T ss_pred cEEcCCCcEEEEEEecC----CCceEEEEECCEE-----CC--CCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEEC-Cc
Confidence 56779999999999862 2358999998765 43 33344433333 9999999999999999995 56
Q ss_pred eEEEeeeeccc
Q psy10772 358 LCTHNLTVDAH 368 (378)
Q Consensus 358 l~~~~~~v~~~ 368 (378)
-++..|+|.+.
T Consensus 86 ~~~~~l~V~~~ 96 (100)
T 2yuv_A 86 KCSTELFVRSG 96 (100)
T ss_dssp EEEEEEEECCS
T ss_pred eEEEEEEEecC
Confidence 67888888864
No 30
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.78 E-value=1.2e-08 Score=79.83 Aligned_cols=79 Identities=24% Similarity=0.178 Sum_probs=58.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--ecCc---eEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--VDGG---LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~~~G---LlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.+ +. .+.++.. ...+ |.|.+++.+|+|.|.|.+
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (99)
T 1g1c_A 12 IQSQTVGQGSDAHFRVRVVGKPD---PECEWYKNGVK-----IE--RSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKA 81 (99)
T ss_dssp CCCEEEETTSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEEcCCCcEEEEEEEEEeCC---CEEEEEECCEE-----CC--CCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEE
Confidence 45678899999999999875544 68999988754 32 2233221 2333 999999999999999999
Q ss_pred CC---eeeEEEeeeecc
Q psy10772 354 GN---TVLCTHNLTVDA 367 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~ 367 (378)
.| ...++..|.|.+
T Consensus 82 ~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 82 INIAGETSSHAFLLVQA 98 (99)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCcEEEEEEEEEec
Confidence 87 666777787764
No 31
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.76 E-value=2.8e-08 Score=78.94 Aligned_cols=79 Identities=23% Similarity=0.292 Sum_probs=59.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc--ceEeec----CceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK--FIRTVD----GGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~--~~~~~~----~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|....+. +.|+|+.++.+ |. .+. ++.... .-|.|.+++.+|+|.|.|.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~~----~~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 82 (103)
T 1x44_A 14 LEDTTAYCGERVELECEVSEDD----ANVKWFKNGEE-----II--PGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM 82 (103)
T ss_dssp CCCEEEETTEEEEEEEECSSSS----CCCEEEETTEE-----CC--CSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEE
T ss_pred CCCEEEECCCCEEEEEEecCCC----CeEEEEECCEE-----CC--CCCceEEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence 4567899999999999986532 58999998754 33 232 223322 3499999999999999999
Q ss_pred eCCeeeEEEeeeecccc
Q psy10772 353 LGNTVLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~~~l~~~~~~v~~~~ 369 (378)
+.| .-++..|+|....
T Consensus 83 a~n-~~~~~~l~V~~~p 98 (103)
T 1x44_A 83 TTG-GQSSAKLSVDLKS 98 (103)
T ss_dssp ETT-EEEEEEEEEECCC
T ss_pred ECC-CcEEEEEEEeCCC
Confidence 998 5677788887643
No 32
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.76 E-value=1.9e-08 Score=79.09 Aligned_cols=80 Identities=20% Similarity=0.216 Sum_probs=58.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cCceEEeeecCCCCeEEEEEeCC--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.. +.. .+.++... +.-|.|.+++.+|+|.|.|.+.|
T Consensus 15 p~~~~v~~G~~~~l~C~~~g~p~---p~v~W~~~~~~-----~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (100)
T 2edj_A 15 PANQTLAVDGTALLKCKATGDPL---PVISWLKEGFT-----FPG-RDPRATIQEQGTLQIKNLRISDTGTYTCVATSSS 85 (100)
T ss_dssp CCCEEEESSSEEEECCEEECSSC---CEEEEEESSSE-----ESS-SCSSCEECTTCCEEEESCCTTTCCEEEEEEECSS
T ss_pred cCCEEEcCCCcEEEEEEEEEcCC---CEEEEEECCEE-----CCC-CCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCC
Confidence 45678889999999999875544 57999998754 421 23333333 34499999999999999999987
Q ss_pred -eeeEEEeeeecc
Q psy10772 356 -TVLCTHNLTVDA 367 (378)
Q Consensus 356 -~~l~~~~~~v~~ 367 (378)
..-++..|.|.+
T Consensus 86 g~~~~~~~l~V~~ 98 (100)
T 2edj_A 86 GETSWSAVLDVTE 98 (100)
T ss_dssp CCCBCCEEEEEES
T ss_pred CCEEEEEEEEEec
Confidence 456667777764
No 33
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.76 E-value=2e-08 Score=78.64 Aligned_cols=80 Identities=19% Similarity=0.300 Sum_probs=60.1
Q ss_pred ceeEEEEeCCeeeeeeeeccC-CCCCCCCeEEEEecccCceeeEeeccCcceEe-ecC---ceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLP-ASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDG---GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~-~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~---GLlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+. +. |.|+|++++.+ +. .+.++.. ..+ -|.|.+++.+|+|.|.|.+
T Consensus 8 ~~~~~v~~G~~v~l~C~~~g~~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 8 IMHAVGEEGGHVKYVCKIENYDQS---TQVTWYFGVRQ-----LE--NSEKYEITYEDGVAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp CCCEEECTTCCEEEEEEEESCCTT---CEEEEEETTEE-----CC--SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcCEEEcCCCcEEEEEEEeccCCC---CEEEEEECCEE-----Cc--CCCCEEEEEcCCeEEEEEecCChhhCeEEEEEE
Confidence 456789999999999998753 33 58999998653 32 3333332 233 4999999999999999999
Q ss_pred CC---eeeEEEeeeeccc
Q psy10772 354 GN---TVLCTHNLTVDAH 368 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~~ 368 (378)
.| ...++..|.|.+.
T Consensus 78 ~n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVKGV 95 (97)
T ss_dssp ECSSCEEEEEEEEEETTT
T ss_pred ECCCCeEeEEEEEEEEec
Confidence 87 6677778888754
No 34
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.76 E-value=1.1e-08 Score=81.27 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=59.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.+.|+.++.. +. .+.++....+| |.|.+++.+|+|.|.|.+.
T Consensus 20 ~~~~~v~~G~~v~l~C~~~g~p~---p~i~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 20 PRPVRVVSGAEAELKCVVLGEPP---PVVVWEKGGQQ-----LA--ASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCCEEEETTSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CccEEEeCCCeEEEEEEEeecCC---CEEEEEECCeE-----CC--CCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 35678899999999999876544 57999987653 32 34454444445 9999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|.+
T Consensus 90 n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEEc
Confidence 7 455777777764
No 35
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.76 E-value=1.4e-08 Score=79.50 Aligned_cols=80 Identities=29% Similarity=0.391 Sum_probs=58.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.+.|+.++.+ +. ..+.++....+| |.|.+++.+|+|.|.|.+.
T Consensus 12 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~k~~~~-----~~-~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 12 LMDQSVREGQDVIMSIRVQGEPK---PVVSWLRNRQP-----VR-PDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp CCCEEEETTCCEEEEEEEEEESC---CEEEEEETTEE-----CC-CBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCceEecCCCEEEEEEEEEEcCC---CEEEEEECCEE-----CC-CCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 34568899999999999875544 58999998754 32 122333333344 9999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|.+
T Consensus 83 N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 83 NEYGARQCEARLEVRG 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCceeEEEEEEEEC
Confidence 7 556666777753
No 36
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.75 E-value=1.6e-08 Score=78.96 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=57.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC-c---eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG-G---LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~-G---LlI~~v~~~DsG~Y~C~~~ 354 (378)
...+.+.+|+++.|.|...+.+. |.+.|+.++.. +. .+.++....+ + |.|.+++.+|+|.|.|.+.
T Consensus 13 ~~~~~v~~G~~~~l~C~~~g~p~---p~v~W~~~g~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 13 LQDTTVSSDSVAKFAVKATGEPR---PTAIWTKDGKA-----IT--QGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp CCCEEEESSSCEEEEEEEEEESC---CEEEEEETTEE-----CC--SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CccEEEeCCCcEEEEEEEEecCC---CEEEEEECCEE-----Cc--CCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 34578899999999999875544 58999987653 32 3344333332 2 9999999999999999998
Q ss_pred C---eeeEEEeeeec
Q psy10772 355 N---TVLCTHNLTVD 366 (378)
Q Consensus 355 ~---~~l~~~~~~v~ 366 (378)
| ..-++..|+|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 83 NSAGSVSSSCKLTIK 97 (99)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEeEEEEEEEE
Confidence 7 55666677665
No 37
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=1.7e-08 Score=79.81 Aligned_cols=78 Identities=28% Similarity=0.476 Sum_probs=58.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|... .+ .+.|+|+.++.. |. .+.++....+| |.|.+++.+|+|.|.|.+.
T Consensus 18 ~~~~~v~~G~~v~L~C~~~-~p---~~~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 86 (102)
T 2eo1_A 18 HREVQAEAGASATLSCEVA-QA---QTEVTWYKDGKK-----LS--SSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAG 86 (102)
T ss_dssp CEEEEEETTCCEEECCBCS-CS---SSCCEEEETTEE-----CC--CCSSEEEEEETTEEEEEETTCCTTTCSCEEEEET
T ss_pred cccEEEeCCCcEEEEEEec-CC---CCceEEEECCEE-----CC--CCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcC
Confidence 3567899999999999986 22 258999988754 32 33344443333 9999999999999999998
Q ss_pred CeeeEEEeeeeccc
Q psy10772 355 NTVLCTHNLTVDAH 368 (378)
Q Consensus 355 ~~~l~~~~~~v~~~ 368 (378)
+. -++..|+|.+.
T Consensus 87 ~~-~~~~~l~V~~p 99 (102)
T 2eo1_A 87 GQ-QLSFRLQVAGQ 99 (102)
T ss_dssp TE-ECCEEEEEESC
T ss_pred CC-cEEEEEEEeCC
Confidence 64 46788888753
No 38
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=2.4e-08 Score=79.24 Aligned_cols=76 Identities=20% Similarity=0.378 Sum_probs=57.0
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCCee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGNTV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~~~ 357 (378)
+.+.+|+++.|.|...+.+. + |.|+.++.. |. .+.++.....| |.|.+++.+|+|.|.|.+.|.
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~---~-v~W~k~g~~-----~~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~- 87 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDF---P-ATWYKDGQK-----VE--ESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGV- 87 (104)
T ss_dssp EEEESSSCEECCEECSSTTC---C-CEEEETTEE-----CC--CBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSC-
T ss_pred EEEeCCCcEEEEEEecCCCC---c-cEEeeCCEE-----CC--CCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCc-
Confidence 78899999999999865443 4 899988754 32 23333333223 999999999999999999986
Q ss_pred eEEEeeeecccc
Q psy10772 358 LCTHNLTVDAHS 369 (378)
Q Consensus 358 l~~~~~~v~~~~ 369 (378)
.....|+|.+.+
T Consensus 88 ~~~~~l~V~~~P 99 (104)
T 2e6p_A 88 SAFFGVTVQDPS 99 (104)
T ss_dssp CCCEEEEEECCC
T ss_pred eEEEEEEEcCCC
Confidence 557788887654
No 39
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.74 E-value=2.9e-08 Score=77.59 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=61.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
.+.+.+.+|+++.|.|...+ .|.++|+.++.+ +. .+.++......|.|.+++.+|+|.|.|.+.|
T Consensus 8 p~~~~v~~G~~~~l~C~~~~-----~p~v~W~k~g~~-----~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g 75 (95)
T 4hwu_A 8 PEAYVVAPGESLELQCMLKD-----AAVISWTKDGVH-----LG--PNNRTVLIGEYLQIKGATPRDSGLYACTAARTVD 75 (95)
T ss_dssp CEEEEECTTSCEEEECCCCT-----TCEEEEEETTEE-----EC--CCSSEEEETTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCcEEECCCCEEEEEEEeCC-----CCEEEEEECCEE-----CC--CCceEEEeCCEEEECcCCcccCEEEEEEEccCCC
Confidence 45678889999999999864 257999987653 43 4556666677899999999999999999987
Q ss_pred eeeEEEeeeeccc
Q psy10772 356 TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ~~l~~~~~~v~~~ 368 (378)
..-++..|.|.+.
T Consensus 76 ~~~~~~~l~V~~~ 88 (95)
T 4hwu_A 76 SETWIFMVNVTDA 88 (95)
T ss_dssp EEEEEEEEEECCC
T ss_pred cEEEEEEEEEeCC
Confidence 5667778877653
No 40
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=7.9e-09 Score=82.62 Aligned_cols=84 Identities=26% Similarity=0.333 Sum_probs=61.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc---eEEeeecCCCCeEEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG---LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G---LlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+.+.+|+++.|.|...+.+. |.|.|++++.. +......++...++| |.|.+++.+|+|.|.|.+.|
T Consensus 16 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~~~g~~-----~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 16 PGDLTVQEGKLCRMDCKVSGLPT---PDLSWQLDGKP-----VRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCEEEEESSSCBCCEEEEECSSC---CEEECBBSSSB-----CCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCcEEEeCCCEEEEEEEEEEcCC---CEEEEEECCEE-----CCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 45678999999999999875544 58999988754 321111223333444 99999999999999999987
Q ss_pred ---eeeEEEeeeeccccc
Q psy10772 356 ---TVLCTHNLTVDAHSN 370 (378)
Q Consensus 356 ---~~l~~~~~~v~~~~c 370 (378)
..-++..|.|.+.+-
T Consensus 88 ~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKES 105 (110)
T ss_dssp SSCEEEECCEEEEECCCC
T ss_pred CCCEEEEEEEEEEeCCCC
Confidence 667777888876543
No 41
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.73 E-value=3.1e-08 Score=79.88 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=59.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|....+ |.|+|+.++.+ |. .++++....+| |.|.+++.+|+|.|.|.+
T Consensus 26 ~~~~~v~~G~~v~l~C~~~~~-----p~v~W~k~~~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a- 92 (113)
T 2edh_A 26 LRNEEATEGATAVLRCELSKM-----APVEWWKGHET-----LR--DGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC- 92 (113)
T ss_dssp CCCCEECTTSCEEEEEEESSC-----CCCEEEESSSB-----CC--CSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE-
T ss_pred CCceEEeCCCeEEEEEEECCC-----CcEEEEECCEE-----CC--CCCcEEEEECCCEEEEEECCCChhhCEEEEEEe-
Confidence 345678899999999998533 47999998764 43 44555555556 999999999999999999
Q ss_pred CeeeEEEeeeeccc
Q psy10772 355 NTVLCTHNLTVDAH 368 (378)
Q Consensus 355 ~~~l~~~~~~v~~~ 368 (378)
.+.-++..|+|.+.
T Consensus 93 ~~~~~~~~l~V~~~ 106 (113)
T 2edh_A 93 GKERTSAMLTVRAM 106 (113)
T ss_dssp TTEEEEEEEEECCC
T ss_pred CCCCEEEEEEEeCC
Confidence 46677788888764
No 42
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.73 E-value=2.8e-08 Score=80.08 Aligned_cols=75 Identities=20% Similarity=0.342 Sum_probs=55.3
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccC-cceEee-cC---ceEEeeecCCCCeEEEEEeCC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD-KFIRTV-DG---GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~-~~~~~~-~~---GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+.+|+++.|.|.+. .+. +.|+|+.++.+ |. .+ .++... +. -|.|.+++.+|+|.|.|.+.+
T Consensus 25 ~~~v~~G~~v~L~C~~~-~p~---~~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 25 AYQVSKGHKIRLTVELA-DHD---AEVKWLKNGQE-----IQ--MSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp EEEEETTSCEEEEEECS-SSS---SCCEEEESSSE-----EC--CCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred cEEEecCCCEEEEEEEc-CCC---CEEEEEECCEE-----CC--CCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 37789999999999983 322 57999998764 43 33 333333 33 599999999999999999976
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
.-++..|+|.+
T Consensus 94 -~~~~~~l~V~e 104 (104)
T 1pd6_A 94 -EKCSTELFVKE 104 (104)
T ss_dssp -EEECCEEEEEC
T ss_pred -CcEEEEEEEeC
Confidence 44677777753
No 43
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.72 E-value=2.3e-08 Score=78.42 Aligned_cols=77 Identities=16% Similarity=0.233 Sum_probs=58.9
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC--
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
..+.+.+.+|+++.|.|...+.+ |.+.|+.++.. |. .+.++.....-|.|.+++.+|+|.|.|.+.|
T Consensus 15 ~~~~~~v~~G~~v~l~C~~~g~p----p~i~W~k~g~~-----~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 83 (95)
T 2ckn_A 15 EVESLLVHPGDLLQLRCRLRDDV----QSINWLRDGVQ-----LV--ESNRTRITGEEVEVRDSIPADSGLYACVTSSPS 83 (95)
T ss_dssp BBCCEEECTTSCEEEECCEESSC----CEEEEEBTTBC-----CC--CCSSEEECSSEEEESSCCGGGSEEEEEEEEETT
T ss_pred CcceEEEcCCCeEEEEEECCCCC----CceEEEECCEe-----cC--CCCCEEEeCCEEEECCCChHHCEEEEEEeccCC
Confidence 34667889999999999987542 37999987654 43 4456666667799999999999999999987
Q ss_pred -eeeEEEeeee
Q psy10772 356 -TVLCTHNLTV 365 (378)
Q Consensus 356 -~~l~~~~~~v 365 (378)
..-++..|+|
T Consensus 84 g~~~~~~~l~V 94 (95)
T 2ckn_A 84 GSDTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEEEE
T ss_pred CcEEEEEEEEE
Confidence 4555555554
No 44
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.72 E-value=2.6e-08 Score=85.16 Aligned_cols=84 Identities=13% Similarity=0.145 Sum_probs=60.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc-----------------------CceeeEeeccCcceEe-ecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD-----------------------KGRYQIKFRSDKFIRT-VDG 334 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~-----------------------~~~~~l~~~~~~~~~~-~~~ 334 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.. .+...|. ..+.++.+ ...
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~---P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~r~~i~~~~ 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPA---PTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC-ETEGRVRVETTK 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSC---CEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCC-SCSSSCEEEEET
T ss_pred CCCEEEeCCCeEEEEEEEEEcCC---CeEEEEECCcccccccccccccccccccccccccccceeec-CCCCeEEEEeCC
Confidence 46789999999999999876654 78999998720 0000121 12334433 233
Q ss_pred c---eEEeeecCCCCeEEEEEeCC---eeeEEEeeeec
Q psy10772 335 G---LVIMAVEELDAGKYDCWLGN---TVLCTHNLTVD 366 (378)
Q Consensus 335 G---LlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~ 366 (378)
+ |.|.+++.+|+|.|.|.+.| ..-++..|.|-
T Consensus 101 ~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 101 DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 3 99999999999999999998 67777777774
No 45
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=3.4e-08 Score=80.41 Aligned_cols=79 Identities=14% Similarity=0.155 Sum_probs=58.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecCc--eEEeeecCCCCeEEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDGG--LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~G--LlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.+ |. .+...+ ..+.. |.|.+++.+|+|.|.|.+.|
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~---p~i~W~k~g~~-----l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 100 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPR---PQVVWTKGGAP-----LD--TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQI 100 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CSSCEEEECSSEEEEEESSCCTTTCEEEEEEEEC
T ss_pred CCCEEEECCCEEEEEEEEccCCC---CEEEEEECCEE-----CC--CCcEEEEECCCeEEEEECCCChhcCEEEEEEEEe
Confidence 45678899999999999876554 68999988754 32 222222 22333 99999999999999999987
Q ss_pred ---eeeEEEeeeecc
Q psy10772 356 ---TVLCTHNLTVDA 367 (378)
Q Consensus 356 ---~~l~~~~~~v~~ 367 (378)
..-++..|.|.+
T Consensus 101 ~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 101 ENMKDTATIRIRVVE 115 (118)
T ss_dssp SSCEECCEEEEEEEC
T ss_pred CCCeEEEEEEEEEEc
Confidence 566777777764
No 46
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.72 E-value=2.3e-08 Score=79.17 Aligned_cols=79 Identities=23% Similarity=0.368 Sum_probs=58.8
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEe
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~ 353 (378)
..+.+.+.+|+++.|.|...+.+. + |+|+.++.. |. .+.++....+| |.|.+++.+|+|.|.|.+
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~p~---~-v~W~k~~~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2e7b_A 14 ALKDLEVLEGGAATLRCVLSSVAA---P-VKWCYGNNV-----LR--PGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF 82 (103)
T ss_dssp CCCCEEEESSSCEEEEEECSSCCC---S-CEEEESSSB-----CC--CSSSEEEEECSSEEEEEECSCCTTTCCCEEEEC
T ss_pred cCccEEEECCCcEEEEEEEeCCCC---C-eEEEECCEE-----CC--CCCcEEEEEcCCEEEEEEccCCcccCEEEEEEE
Confidence 356788999999999999865544 4 999998764 42 34444444444 999999999999999995
Q ss_pred CCeeeEEEeeeeccc
Q psy10772 354 GNTVLCTHNLTVDAH 368 (378)
Q Consensus 354 ~~~~l~~~~~~v~~~ 368 (378)
. ..-++..|+|.+.
T Consensus 83 g-~~~~~~~l~V~~~ 96 (103)
T 2e7b_A 83 G-DQTTSATLTVTAL 96 (103)
T ss_dssp S-SCBCCBCEEEECC
T ss_pred C-CcEEEEEEEEEec
Confidence 5 4556677777653
No 47
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.71 E-value=3.6e-08 Score=79.25 Aligned_cols=89 Identities=20% Similarity=0.179 Sum_probs=58.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc------CceeeEeeccCcceEeecCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD------KGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~------~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+....|.|+|+.++.. ..++++....+..-.....-|.|.+|+.+|+|.|.|.
T Consensus 11 p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (108)
T 3cx2_A 11 PQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCE 90 (108)
T ss_dssp CCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEE
Confidence 4567899999999999987543323368999885411 0111111000000000123599999999999999999
Q ss_pred eCC---eeeEEEeeeecc
Q psy10772 353 LGN---TVLCTHNLTVDA 367 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~ 367 (378)
+.| ..-++..|+|.+
T Consensus 91 a~N~~G~~~~~~~L~V~~ 108 (108)
T 3cx2_A 91 VSTKDKFDCSNFNLTVHE 108 (108)
T ss_dssp EECSSCEEEEEEEEEEEC
T ss_pred EecCCCceEEEEEEEEeC
Confidence 998 778888888853
No 48
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=7.6e-08 Score=77.32 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=58.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeCCe
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+.+.+|+++.|.|... . +.+.+.|+.++.+ |. .+.++....+ -|.|.+++.+|+|.|.|.+.|
T Consensus 22 ~~~~~~G~~v~L~C~~~-~---p~~~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 89 (113)
T 2cpc_A 22 YVAAVRLERVVLTCELC-R---PWAEVRWTKDGEE-----VV--ESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD- 89 (113)
T ss_dssp EEEEETTCCEEEEEEES-C---TTCCCEEEETTEE-----CC--CBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS-
T ss_pred eEEEEcCCeEEEEEEec-C---CCCeEEEEECCEE-----Cc--cCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec-
Confidence 36788999999999985 2 2358999998754 32 3334444333 499999999999999999998
Q ss_pred eeEEEeeeecccc
Q psy10772 357 VLCTHNLTVDAHS 369 (378)
Q Consensus 357 ~l~~~~~~v~~~~ 369 (378)
.-++..|+|.+.+
T Consensus 90 ~~~~~~l~V~~~p 102 (113)
T 2cpc_A 90 ESASFTVTVTEPP 102 (113)
T ss_dssp CEEEEEEEEECCC
T ss_pred CcEEEEEEEecCC
Confidence 6678888888655
No 49
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=4.3e-08 Score=79.68 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=59.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-c----CceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-D----GGLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~----~GLlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.+ |. .+.++.+. . .-|.|.+++.+|+|.|.|.+
T Consensus 20 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (115)
T 2cr6_A 20 LEDVDVQEGSSATFRCRISPANY---EPVHWFLDKTP-----LH--ANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA 89 (115)
T ss_dssp CCEEEEETTSCEECCCEEESTTC---CSCEEEESSCE-----EC--CSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE
T ss_pred CccEEEeCCCcEEEEEEEcCCCC---CccEEEECCEE-----CC--CCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE
Confidence 45678999999999999875544 58999998764 43 33333332 1 23999999999999999997
Q ss_pred CCeeeEEEeeeeccccc
Q psy10772 354 GNTVLCTHNLTVDAHSN 370 (378)
Q Consensus 354 ~~~~l~~~~~~v~~~~c 370 (378)
.+ ..++..|+|.+.+-
T Consensus 90 g~-~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 90 GD-QRASAALRVTEKPS 105 (115)
T ss_dssp TT-EECCEEEEEECCSS
T ss_pred CC-eeEEEEEEEECCCc
Confidence 64 45667788877654
No 50
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=6.2e-08 Score=76.68 Aligned_cols=80 Identities=18% Similarity=0.300 Sum_probs=59.1
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEe
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~ 353 (378)
..+.+.+.+|+++.|.|... .+ .+.|+|+.++.+ |. .+.++....+| |.|.+++.+|+|.|.|..
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~-~p---~~~v~W~k~~~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 82 (103)
T 2dku_A 14 ELTNLQVEEKGTAVFTCKTE-HP---AATVTWRKGLLE-----LR--ASGKHQPSQEGLTLRLTISALEKADSDTYTCDI 82 (103)
T ss_dssp CCCCEEEETTSEEEEEEECS-SC---CSCCEEEESSCB-----CC--SSSSEEEEEETTEEEEEEESCCTTTCSEEEEEC
T ss_pred cCCcEEEeCCCcEEEEEEeC-CC---CCeEEEEeCCEE-----CC--CCCeEEEEeCCCEEEEEECCCCcccCEEEEEEe
Confidence 35678899999999999953 22 248999998764 43 34444444344 999999999999999994
Q ss_pred CCeeeEEEeeeecccc
Q psy10772 354 GNTVLCTHNLTVDAHS 369 (378)
Q Consensus 354 ~~~~l~~~~~~v~~~~ 369 (378)
. ..-++..|+|.+.+
T Consensus 83 g-~~~~~~~l~V~~~p 97 (103)
T 2dku_A 83 G-QAQSRAQLLVQGRR 97 (103)
T ss_dssp S-SCBCCEEEEEECSC
T ss_pred C-CceEEEEEEEeCcc
Confidence 4 55567788887654
No 51
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.8e-08 Score=79.76 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=57.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc----ceEeecCc----eEEeeecCCCCeEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK----FIRTVDGG----LVIMAVEELDAGKYD 350 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~----~~~~~~~G----LlI~~v~~~DsG~Y~ 350 (378)
.+.+.+.+|+++.|.|.....+ +.|+|+.++.+ |. .+. ++....+| |.|.+++.+|+|.|.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~----~~v~W~k~g~~-----i~--~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 83 (101)
T 2edk_A 15 LEDQQVFVGDRVEMAVEVSEEG----AQVMWMKNGVE-----LT--REDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQ 83 (101)
T ss_dssp CCCEEEESSCCCBCCEEESCSS----CCCEEEESSCB-----CC--CSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEE
T ss_pred CCceEEcCCCCEEEEEEEeCCC----CEEEEEECCEE-----CC--CCCCcceeEEEEECCCEEEEEECCCChhhCEEEE
Confidence 4567899999999999986554 47999998765 32 222 22333333 999999999999999
Q ss_pred EEeCCeeeEEEeeeeccc
Q psy10772 351 CWLGNTVLCTHNLTVDAH 368 (378)
Q Consensus 351 C~~~~~~l~~~~~~v~~~ 368 (378)
|.+.| .-++-.|+|.+.
T Consensus 84 C~a~n-~~~~~~l~V~~~ 100 (101)
T 2edk_A 84 VITNG-GQCEAELIVEEK 100 (101)
T ss_dssp EECSS-CEECCBEEEECC
T ss_pred EEEcC-CcEEEEEEEeCC
Confidence 99997 456667777653
No 52
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.8e-08 Score=78.61 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=61.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
...+.+.+|+++.|.|...+++ |.++|+.++.. |. .+.++.....-|.|.+++.+|+|.|.|.+.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p----p~i~W~k~g~~-----~~--~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 78 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV----QSINWLRDGVQ-----LA--ESNRTRITGEEVEVQDSVPADSGLYACVTSSPSG 78 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC----CEEEEEESSSB-----CC--CCSSEEECSSEEEETTCCTTTCEEEEEEEEETTE
T ss_pred CcCeEEeCCCcEEEEEEecCCC----CeEEEEECCEE-----CC--CCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCc
Confidence 4566788899999999987642 47999998754 43 3445555567799999999999999999987
Q ss_pred eeeEEEeeeeccc
Q psy10772 356 TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ~~l~~~~~~v~~~ 368 (378)
...+++.|.|.+.
T Consensus 79 ~~~~~~~l~V~~~ 91 (99)
T 2cr3_A 79 SDTTYFSVNVSDA 91 (99)
T ss_dssp EEEEEEEECBCSC
T ss_pred eEEEEEEEEEecC
Confidence 5677777777653
No 53
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=4.1e-08 Score=79.81 Aligned_cols=81 Identities=21% Similarity=0.294 Sum_probs=60.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCC--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.. +.. .+.++.. .+.-|.|.+++.+|+|.|.|.+.|
T Consensus 15 p~~~~v~~G~~v~l~C~~~g~p~---p~i~W~k~g~~-----~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (118)
T 2eo9_A 15 PVNQTVAVDGTFVLSCVATGSPV---PTILWRKDGVL-----VST-QDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPS 85 (118)
T ss_dssp CCCEEEETTCEEEEECBCCCSSC---CEEEEEESSSB-----CCT-TSTTEEEEETTEEEEESCCGGGCCCEEEEEECSS
T ss_pred CCCEEEcCCCeEEEEEEEEecCC---CEEEEEECCEE-----CcC-CCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCC
Confidence 45678999999999999865444 58999998754 321 2334433 344599999999999999999987
Q ss_pred -eeeEEEeeeeccc
Q psy10772 356 -TVLCTHNLTVDAH 368 (378)
Q Consensus 356 -~~l~~~~~~v~~~ 368 (378)
...++..|+|.+.
T Consensus 86 g~~~~~~~l~V~~~ 99 (118)
T 2eo9_A 86 GEATWSAYIEVQEF 99 (118)
T ss_dssp CEEEEECCEEEECC
T ss_pred CcEEEEEEEEEEeC
Confidence 5566677777754
No 54
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=3.4e-08 Score=79.16 Aligned_cols=82 Identities=23% Similarity=0.291 Sum_probs=60.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cCc---eEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DGG---LVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~G---LlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.. +.. .+.++... .+| |.|.+++.+|+|.|.|.+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~k~g~~-----~~~-~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 15 LKHYKIFEGMPVTFTCRVAGNPK---PKIYWFKDGKQ-----ISP-KSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp CCCEEEETTCCEEEEEEBCCSSC---CEEEEECSSCB-----CCT-TCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CcCeEEeCCCeEEEEEEEEecCC---CEEEEEECCEE-----CCC-CCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 46678999999999999875443 68999998754 321 12233222 244 999999999999999999
Q ss_pred CC---eeeEEEeeeecccc
Q psy10772 354 GN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~~~ 369 (378)
.| ...+...|.|.+..
T Consensus 86 ~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp ECTTCCEEECCCEEEECCS
T ss_pred EECCCeEEEEEEEEEECCC
Confidence 87 56677788887643
No 55
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.67 E-value=4.5e-08 Score=77.73 Aligned_cols=80 Identities=20% Similarity=0.322 Sum_probs=56.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cCceEEeeecCCCCeEEEEEeCC-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DGGLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
...+.+.+|+++.|.|...+.+. |.+.|++++.. +. .+.++... ..-|.|.+++.+|+|.|.|.+.|
T Consensus 17 ~~~~~v~~G~~v~l~C~~~g~p~---p~i~W~~~~~~-----~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 17 LENQTTSIGESIEVSCTASGNPP---PQIMWFKDNET-----LV--EDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSV 86 (108)
T ss_dssp CCCEEEETTCCEEEECBCC-------CCEEEEESSSB-----CC--CBTTEEEETTTTEEEECSCCGGGCEEEEEEEC--
T ss_pred CCCeEEeCCCeEEEEEECcCcCC---CeEEEEECCeE-----cc--cCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeC
Confidence 35678899999999999864433 58999998764 32 22333322 23499999999999999999987
Q ss_pred --eeeEEEeeeeccc
Q psy10772 356 --TVLCTHNLTVDAH 368 (378)
Q Consensus 356 --~~l~~~~~~v~~~ 368 (378)
..-++..|.|...
T Consensus 87 ~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 87 LGCAKVEAFFIIEGA 101 (108)
T ss_dssp --CEEEEEEEEEEC-
T ss_pred CCceEEEEEEEEeCC
Confidence 5667778887754
No 56
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.67 E-value=6.9e-08 Score=78.88 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=60.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec--C---ceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD--G---GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~--~---GLlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. |.|.|+.++.. +.. .++++.... . -|.|.+++.+|+|.|.|.+
T Consensus 22 p~~~~v~~G~~v~L~C~~~g~p~---p~v~W~k~~~~-----~~~-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (116)
T 2kkq_A 22 PQSKKVLEGDSVKLECQISAIPP---PKLFWKRNNEM-----VQF-NTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSA 92 (116)
T ss_dssp CCCEEEETTEEEEEEEEBCCBSC---CEEEEEETTEE-----CCC-CBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEE
T ss_pred CCcEEEeCCCcEEEEEEEeccCC---CEEEEEECCEE-----CcC-CCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEE
Confidence 46688999999999999865443 58999988753 321 123333322 2 3999999999999999999
Q ss_pred CC---eeeEEEeeeecccc
Q psy10772 354 GN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~~~ 369 (378)
.| ..-++..|.|...+
T Consensus 93 ~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 93 VNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp EETTEEEEEEEEEEEECCS
T ss_pred EcCCCeEEEEEEEEEeCCC
Confidence 87 56677888887643
No 57
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.66 E-value=3.5e-08 Score=77.41 Aligned_cols=77 Identities=25% Similarity=0.323 Sum_probs=54.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cCceEEeeecCCCCeEEEEEeCC--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
.+.+.+.+|+++.|.|...+.+. |.+.|+.++.. +. .+...... ..-|.|.+++.+|+|.|.|.+.|
T Consensus 18 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~~~g~~-----~~--~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~ 87 (99)
T 2yr3_A 18 LKDCAVIEGQDFVLQCSVRGTPV---PRITWLLNGQP-----IQ--YARSTCEAGVAELHIQDALPEDHGTYTCLAENAL 87 (99)
T ss_dssp CCCEEECTTCCEEEECEEEEESC---CCCEEEESSSB-----CS--SCCCEEETTEEEEEECSCCTTCCBCEEEEEECSS
T ss_pred CCCCEEeCCCeEEEEEEEeeeCC---CeEEEEECCEE-----Cc--ccceEeeCCeEEEEECCCChhhCEEEEEEEEECC
Confidence 35577889999999999875544 58999998764 32 22222211 23499999999999999999987
Q ss_pred -eeeEEEeeee
Q psy10772 356 -TVLCTHNLTV 365 (378)
Q Consensus 356 -~~l~~~~~~v 365 (378)
..-++..|+|
T Consensus 88 g~~~~~~~l~V 98 (99)
T 2yr3_A 88 GQVSCSAWVTV 98 (99)
T ss_dssp CEEEEECCEEE
T ss_pred CeEEEEEEEEE
Confidence 4455555554
No 58
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.65 E-value=3.7e-08 Score=76.60 Aligned_cols=77 Identities=12% Similarity=0.151 Sum_probs=55.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEec--ccCceeeEeeccCcceEee--cCceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYS--KDKGRYQIKFRSDKFIRTV--DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~--~~~~~~~l~~~~~~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++ .. +. .+.++... ..-|.|.+++.+|+|.|.|.+.
T Consensus 9 ~~~~~v~~G~~~~l~C~~~g~P~---p~i~W~k~~~~~~-----~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 9 SRKIKIKAGFTHNLEVDFIGAPD---PTATWTVGDSGAA-----LA--PELLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEEEECTTBCCEEEEEEECCSS---CEEEEECSTTTCB-----CS--TTSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCceEEeCCCEEEEEEEEEEcCC---CEEEEEECCCCcc-----cC--CcEEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 45778999999999999976654 689999987 43 31 11111111 1238999999999999999999
Q ss_pred C---eeeEEEeeee
Q psy10772 355 N---TVLCTHNLTV 365 (378)
Q Consensus 355 ~---~~l~~~~~~v 365 (378)
| ..-++..|.|
T Consensus 79 N~~G~~~~~~~l~V 92 (93)
T 1wit_A 79 NELGEDEAIFEVIV 92 (93)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEE
Confidence 8 5556666655
No 59
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.65 E-value=4.9e-08 Score=76.02 Aligned_cols=80 Identities=20% Similarity=0.332 Sum_probs=57.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec----CceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD----GGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~----~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.+.|+.++.+ +....+.++.... .-|.|.+++.+|+|.|.|.+.
T Consensus 12 ~~~~~~~~G~~~~l~C~~~g~p~---p~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 12 PSDISIDEGKVLTVACAFTGEPT---PEVTWSCGGRK-----IHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp CSEEEEETTSEEEEEEEEEEESC---CEEEEEETTEE-----CCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcEEEcCCCcEEEEEEEEEcCC---CceEEEECCEE-----eecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 35678899999999999865544 58999987653 3211233433332 239999999999999999998
Q ss_pred C---eeeEEEeeeec
Q psy10772 355 N---TVLCTHNLTVD 366 (378)
Q Consensus 355 ~---~~l~~~~~~v~ 366 (378)
| ..-++..|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 7 55566666664
No 60
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.60 E-value=8.3e-08 Score=76.57 Aligned_cols=77 Identities=25% Similarity=0.389 Sum_probs=58.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cCc---eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DGG---LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~G---LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|..... |.|+|++++.+ +. .+.++... +.+ |.|.+++.+|+|.|.|.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~-----p~v~W~k~~~~-----~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 82 (108)
T 2dm7_A 15 LKTKEASEGATATLQCELSKV-----APVEWKKGPET-----LR--DGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG 82 (108)
T ss_dssp CBCCEEETTSCEEEEEEBSSS-----CCCEEESSSSB-----CC--SSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET
T ss_pred CCcEEEeCCCcEEEEEEeCCC-----CeeEEEECCEE-----CC--CCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc
Confidence 466789999999999998532 47999988754 43 34444443 334 9999999999999999997
Q ss_pred CeeeEEEeeeeccc
Q psy10772 355 NTVLCTHNLTVDAH 368 (378)
Q Consensus 355 ~~~l~~~~~~v~~~ 368 (378)
| .-++..|+|...
T Consensus 83 n-~~~~~~l~V~~~ 95 (108)
T 2dm7_A 83 Q-ERTSATLTVRAL 95 (108)
T ss_dssp T-EEEEEECEEECC
T ss_pred C-CEEEEEEEEecC
Confidence 6 467777888764
No 61
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.59 E-value=1.9e-07 Score=73.17 Aligned_cols=77 Identities=26% Similarity=0.305 Sum_probs=56.2
Q ss_pred ceeEEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC--
Q psy10772 279 RLKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
.+.+.+.+|+++.|.|... ..+. +.++|+.++.. + ...+....+.-|.|.+++.+|+|.|.|.+.|
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~k~~~~-----~---~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSPA---YTLVWTRLHNG-----K---LPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMF 85 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSSC---CEEEEEEGGGB-----C---CCTTEEEETTEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCCeEEecCCCEEEEEeCCCCCCC---cEEEEEeCCCC-----C---CCceeecCCCEEEEeCCChhhCEEEEEEecCCC
Confidence 3567888999999999987 2333 58999987543 1 1123344566799999999999999999987
Q ss_pred -eeeEEEeeeec
Q psy10772 356 -TVLCTHNLTVD 366 (378)
Q Consensus 356 -~~l~~~~~~v~ 366 (378)
..-++..|.|.
T Consensus 86 g~~~~~~~l~V~ 97 (98)
T 1gl4_B 86 AMDQGTATLHVQ 97 (98)
T ss_dssp CEEEEEEEEEEC
T ss_pred CccccEEEEEEe
Confidence 45556666553
No 62
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.59 E-value=4e-08 Score=79.01 Aligned_cols=78 Identities=19% Similarity=0.278 Sum_probs=57.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee----cCceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV----DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~----~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.|.|+.++.+ |. .+.++... ..-|.|.+++.+|+|.|.|.+.
T Consensus 21 p~~~~v~~G~~v~L~C~~~g~p~---p~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 21 PRSMTVYEGESARFSCDTDGEPV---PTVTWLRKGQV-----LS--TSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp CCCEEESSSSCEECCEEEECSSC---CBCCBCSSSSC-----CT--TCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCEEEeCCCcEEEEEEEEEcCC---CEEEEEECCEE-----CC--CCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 45678899999999999875544 68999988754 32 23333332 2359999999999999999998
Q ss_pred C---eeeEEEeeeec
Q psy10772 355 N---TVLCTHNLTVD 366 (378)
Q Consensus 355 ~---~~l~~~~~~v~ 366 (378)
| ..-++..|+|.
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 7 55667777664
No 63
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.57 E-value=1.1e-07 Score=81.40 Aligned_cols=82 Identities=23% Similarity=0.381 Sum_probs=59.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cC---ceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DG---GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~---GLlI~~v~~~DsG~Y~C~~~ 354 (378)
+.+.+.+|+++.|.|...+.+. |.|+|+.++.. |. .+.++... .+ -|.|.+++..|+|.|.|.+.
T Consensus 49 ~~~~v~~G~~v~L~C~~~g~P~---p~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 118 (154)
T 1fhg_A 49 LDMEVVEGSAARFDCKVEGYPD---PEVMWFKDDNP-----VK--ESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAV 118 (154)
T ss_dssp CCEEEETTSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecC---CEEEEEECCEE-----CC--CCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEE
Confidence 4578899999999999876544 58999998754 32 33333332 22 49999999999999999998
Q ss_pred C---eeeEEEeeeecccccC
Q psy10772 355 N---TVLCTHNLTVDAHSNV 371 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~c~ 371 (378)
| ..-++..|.|....-.
T Consensus 119 N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 119 NSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp ETTEEEEEEEEEEEECC---
T ss_pred ECCCeEEEEEEEEEeCcCcC
Confidence 7 5667778888765533
No 64
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.56 E-value=8.5e-08 Score=75.19 Aligned_cols=79 Identities=22% Similarity=0.316 Sum_probs=54.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccC-cceEee--cCceEEeeecCCCCeEEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD-KFIRTV--DGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~-~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+.+.+|+++.|.|...+.+. |.++|+.++.+ +..... ..+... ..-|.|.+++.+|+|.|.|.+.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~---p~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 86 (100)
T 3caf_A 15 KRLHAVPAANTVKFRCPAGGNPM---PTMRWLKNGKE-----FKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVEN 86 (100)
T ss_dssp CCEEEECTTCCEEEECCEEEESC---CEEEEEETTEE-----CCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEE
T ss_pred ccEEEecCCCEEEEEEEccccCC---CEEEEEECCEE-----cccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEe
Confidence 45678889999999999875543 57999987654 321011 011222 22499999999999999999987
Q ss_pred ---eeeEEEeeee
Q psy10772 356 ---TVLCTHNLTV 365 (378)
Q Consensus 356 ---~~l~~~~~~v 365 (378)
...++..|.|
T Consensus 87 ~~g~~~~~~~l~V 99 (100)
T 3caf_A 87 EYGSINHTYHLDV 99 (100)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE
Confidence 4455666654
No 65
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.55 E-value=7.6e-08 Score=86.66 Aligned_cols=76 Identities=26% Similarity=0.336 Sum_probs=57.6
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc---eEEeeecCCCCeEEEEEeCC---
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG---LVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G---LlI~~v~~~DsG~Y~C~~~~--- 355 (378)
+.+.+|+++.|.|.+.+.. |.|.|+|+.++.+ |. .+.++.. ..| |.|.+++.+|+|.|.|.+.|
T Consensus 126 ~~v~~g~~v~l~C~v~g~~--P~p~i~W~k~g~~-----l~--~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 195 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVANIK--KETHIVWYKDERE-----IS--VDEKHDF-KDGICTLLITEFSKKDAGIYEVILKDDRG 195 (207)
T ss_dssp EEEETTTEEEEEEEEESCC--TTCEEEEEETTEE-----EC--CCCCCCC-SSEEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred cEEcCCCcEEEEEEEeCCC--CCCEEEEEECCEE-----CC--CCCceEc-CCCEEEEEECCCCcccCEEEEEEEEcCCC
Confidence 6788999999999986541 2368999998764 54 3444332 233 99999999999999999998
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
...++..|++++
T Consensus 196 ~~~~~~~L~~~~ 207 (207)
T 3rbs_A 196 KDKSRLKLVDEA 207 (207)
T ss_dssp EEEEEEEECCC-
T ss_pred EEEEEEEEecCC
Confidence 778888887754
No 66
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.53 E-value=2.3e-07 Score=74.24 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=54.9
Q ss_pred EeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe---------ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 285 TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT---------VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 285 ~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~---------~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..|..+.|+|.+.+.+. |.|+|++++.+ |. .++++.. ...-|.|.+++.+|+|.|.|.+.|
T Consensus 14 ~~~~~~~~~c~v~G~P~---P~i~W~k~g~~-----l~--~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 83 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPK---PALQWFYNGAI-----LN--ESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKN 83 (103)
T ss_dssp CCCCEEEEEEEEECSSC---CEEEEEETTEE-----EC--CCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEC
T ss_pred eECcEEEEEEEEEEeCC---CEEEEEECCEE-----CC--CCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEe
Confidence 35788999999876655 78999998754 43 3333211 111299999999999999999998
Q ss_pred ---eeeEEEeeeeccc
Q psy10772 356 ---TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ---~~l~~~~~~v~~~ 368 (378)
..-++..|+|.+.
T Consensus 84 ~~G~~~~~~~l~V~~~ 99 (103)
T 1wwb_X 84 EYGKDEKQISAHFMGW 99 (103)
T ss_dssp SSCEEEEEEEECCSCC
T ss_pred CCCcEeEEEEEEECCC
Confidence 6778888888754
No 67
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.46 E-value=2.7e-07 Score=77.95 Aligned_cols=74 Identities=12% Similarity=0.151 Sum_probs=54.9
Q ss_pred eCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE--ee---------cCceEEeeecCCCCeEEEEEeC
Q psy10772 286 WGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR--TV---------DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 286 ~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~--~~---------~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+..+.|+|.+.+.+. |.|+|++|+.+ |. .+.++. .. ..-|.|.+++..|+|.|.|.|.
T Consensus 14 ~~~~~~l~c~v~G~P~---P~I~W~knG~~-----l~--~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~ 83 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPA---PSLRWLFNGSV-----LN--ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAA 83 (126)
T ss_dssp CCCEEEEEEEECCSSC---CEEEEEETTEE-----CC--CCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEE
T ss_pred cCccEEEEEEEeeeCC---CeEEEEECCEE-----CC--CCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEE
Confidence 5678889999876665 79999999865 32 222211 11 1239999999999999999999
Q ss_pred C---eeeEEEeeeecccc
Q psy10772 355 N---TVLCTHNLTVDAHS 369 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~ 369 (378)
| ...++..|.|.+.+
T Consensus 84 N~~G~~~~t~~l~v~~~P 101 (126)
T 1he7_A 84 NPFGQASASIMAAFMDNP 101 (126)
T ss_dssp ETTEEEEEEEEECCCSCT
T ss_pred ECCCeEEEEEEEEEEcCC
Confidence 8 77778888777543
No 68
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.44 E-value=5.8e-07 Score=87.43 Aligned_cols=121 Identities=21% Similarity=0.236 Sum_probs=81.0
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..+...| .+.|++. +-...|....- ...+... |..= ...+.+.+..|+++.|.|...+.+.
T Consensus 259 ~L~I~~v~~~D---~G~Y~C~-a~N~~G~~~~~~~l~v~~~-----P~~~---~~~~~~~v~~g~~v~l~C~~~g~P~-- 324 (384)
T 3kld_A 259 ILEIPNFQQED---AGSYECV-AENSRGKNVAKGQLTFYAQ-----PNWV---QIINDIHVAMEESVFWECKANGRPK-- 324 (384)
T ss_dssp EEEECSCCGGG---CEEEEEE-EEETTEEEEEEEEEEEEEE-----EEEE---ECCCCEEECTTCCEEEECEEEEESC--
T ss_pred EEEECCCChhh---CEEEEEE-EEcCCCeEEEEEEEEEecC-----Cccc---cCCCceEecCCCCEEEEeECCccCC--
Confidence 35566665555 5789887 44555654321 1111110 0000 0123567888999999999976554
Q ss_pred CCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 304 NQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|.++|++++.+ |. .++++...+.-|.|.+++.+|+|.|.|.+.| ...++-.|+|.+
T Consensus 325 -p~i~W~k~g~~-----l~--~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 325 -PTYRWLKNGDP-----LL--TRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp -CEEEEEETTEE-----CC--CBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred -CeEEEEECCEE-----CC--CCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 68999998764 43 4556666666799999999999999999988 777888888864
No 69
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.44 E-value=8.7e-07 Score=69.74 Aligned_cols=86 Identities=22% Similarity=0.261 Sum_probs=56.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee-eEeeccCcceEe-----ecCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRT-----VDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~-~l~~~~~~~~~~-----~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|.....+. +.|.|+.++...-.. .-....+.|+.. ....|.|.+|+.+|+|.|.|.
T Consensus 13 ~~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (108)
T 3m45_A 13 TQNVTVVEGGTAILTCRVDQNDN---TSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCS 89 (108)
T ss_dssp CCCEEEETTSCEEEEEEESSCSS---CCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEE
T ss_pred CCeeEEEeCCcEEEEeEEcCCCc---cEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEE
Confidence 45688999999999999976543 589998754310000 000012234433 234599999999999999999
Q ss_pred eCC--eeeEEEeeeecc
Q psy10772 353 LGN--TVLCTHNLTVDA 367 (378)
Q Consensus 353 ~~~--~~l~~~~~~v~~ 367 (378)
+.+ ..-+...|+|.+
T Consensus 90 ~~n~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 90 LFTMPVKTSKAYLTVLG 106 (108)
T ss_dssp ECSSSCEEEEEEEEEEC
T ss_pred EEcCCCcEEEEEEEEEc
Confidence 987 334455566643
No 70
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.43 E-value=6e-08 Score=79.41 Aligned_cols=88 Identities=14% Similarity=0.211 Sum_probs=65.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCC-eEEEEecccCceeeEeeccCcceEe----ecC----ceEEeeecCCCC-eEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQP-MSWYHYSKDKGRYQIKFRSDKFIRT----VDG----GLVIMAVEELDA-GKY 349 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~-v~W~~~~~~~~~~~l~~~~~~~~~~----~~~----GLlI~~v~~~Ds-G~Y 349 (378)
+.+.+.+|+++.|.|...+.+. |. |+|++++.. |....+.++.. .++ -|.|.+++..|+ |.|
T Consensus 21 ~~~~~~~G~~v~l~C~~~g~P~---p~~i~W~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y 92 (122)
T 2cry_A 21 QTQHALHGEKGQIKCFIRSTPP---PDRIAWSWKENV-----LESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIY 92 (122)
T ss_dssp CCCCCCTTSCCCCCEEECCSSC---CSEEEEESSSCE-----ECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCE
T ss_pred CeEEEecCCCEEEEEEEeecCC---CcEeEEEECCEE-----ccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceE
Confidence 4456788999999999875543 55 999998654 32111233322 133 499999999999 999
Q ss_pred EEEeCC---eeeEEEeeeecccccCCCCC
Q psy10772 350 DCWLGN---TVLCTHNLTVDAHSNVADAP 375 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v~~~~c~~~~~ 375 (378)
.|.+.| ..-+...|.|.+.+-..|++
T Consensus 93 ~C~a~N~~G~~~~~~~l~V~~~~~~~pss 121 (122)
T 2cry_A 93 NCTAWNSFGSDTEIIRLKEQGSEMSGPSS 121 (122)
T ss_dssp EEEEECSSCEEEEEECCCCSCSSCCCCCC
T ss_pred EEEEECCCCeEEEEEEEEECCCCCCCCCC
Confidence 999998 66789999999888888775
No 71
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.43 E-value=6.9e-07 Score=73.51 Aligned_cols=90 Identities=19% Similarity=0.192 Sum_probs=56.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----ccCcceEee-----cCceEEeeecCCCCeE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----RSDKFIRTV-----DGGLVIMAVEELDAGK 348 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----~~~~~~~~~-----~~GLlI~~v~~~DsG~ 348 (378)
...+.+.+|+++.|.|...+.+. +.|.|+..+.. .+.. ..++++... ...|.|.+|+.+|+|.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~----~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 80 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKN---SSLQWLTPSGF----TIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGV 80 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTT---CEEEEECTTSC----EEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CccEEEcCCCCEEEEeEEeccCC---CEEEEECCCCe----EEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEE
Confidence 45678999999999999875433 58999843322 0110 123333332 2459999999999999
Q ss_pred EEEEeCC--eeeEEEeeeecccc----cCCCCC
Q psy10772 349 YDCWLGN--TVLCTHNLTVDAHS----NVADAP 375 (378)
Q Consensus 349 Y~C~~~~--~~l~~~~~~v~~~~----c~~~~~ 375 (378)
|.|.+.+ .......|+|...+ |.-|..
T Consensus 81 Y~C~a~n~g~~~~~~~l~V~~~P~~~~~~~P~~ 113 (124)
T 3rbg_A 81 YKCLHYSDSVSTKEVKVIVLATMKGEFCRYPSH 113 (124)
T ss_dssp EEEEEESSSEEEEEEEEEEECC-----------
T ss_pred EEEEEEcCCCCcEEEEEEEEeCCCCCcccccCc
Confidence 9999976 45666677776543 555544
No 72
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.40 E-value=7.3e-07 Score=72.46 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=59.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc-----CcceEeecCceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-----DKFIRTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~-----~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+.+|+++.|.|...+.+. +.+.+.|++++....+..+.... .........-|.|.+++.+|+|.|.|.+.
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELN-VGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTT-CCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEecCCeEEEEEEEEcCCC-CcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 4467889999999999976333 22478999887631110000000 01111223359999999999999999998
Q ss_pred C---eeeEEEeeeecccccC
Q psy10772 355 N---TVLCTHNLTVDAHSNV 371 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~c~ 371 (378)
| ..-++..|+|.+.+-+
T Consensus 95 n~~g~~~~~~~l~V~~~p~i 114 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHEKPFV 114 (122)
T ss_dssp CSSCEEEEEEEEEEEEEECC
T ss_pred cCCCceEEEEEEEEeccCeE
Confidence 8 4557888888765543
No 73
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.37 E-value=1.3e-06 Score=75.43 Aligned_cols=76 Identities=24% Similarity=0.313 Sum_probs=57.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
.+.+.+|+++.|.|...+.+. |.++|++++.. +. .+.++.....-|.|.+++..|+|.|.|.+.| ..
T Consensus 122 ~~~~~~g~~~~l~C~~~g~p~---p~v~W~~~~~~-----~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 191 (201)
T 3s97_C 122 DVYALMGQNVTLECFALGNPV---PDIRWRKVLEP-----MP--STAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKD 191 (201)
T ss_dssp CEEEETTCCEEEEEEEEEESC---CEEEEEETTBC-----CC--TTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ceEEecCCcEEEEEEccCCCC---CceEEEeCCCc-----CC--CceeecCCCCEEEEccCChhhCEEEEEEEEecCCce
Confidence 567889999999999865533 68999998764 32 2333333455699999999999999999987 45
Q ss_pred eEEEeeeec
Q psy10772 358 LCTHNLTVD 366 (378)
Q Consensus 358 l~~~~~~v~ 366 (378)
-.+..|.|.
T Consensus 192 ~~~~~l~V~ 200 (201)
T 3s97_C 192 KHQARIYVQ 200 (201)
T ss_dssp EEEEEEEEE
T ss_pred eeeEEEEEe
Confidence 566666665
No 74
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.36 E-value=2.8e-06 Score=73.59 Aligned_cols=125 Identities=17% Similarity=0.094 Sum_probs=75.0
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..+...| .+.|++.. -...|..... ...+........+.. ......+.+.+|+++.|.|...+.+.
T Consensus 63 ~L~i~~~~~~d---~G~Y~C~~-~n~~g~~~~~~~l~V~~~p~~~~~~~---~~~~~~~~~~~g~~~~l~C~~~g~p~-- 133 (197)
T 2j8h_A 63 QLIIASVTDDD---ATVYQVRA-TNQGGSVSGTASLEVEVPAKIHLPKT---LEGMGAVHALRGEVVSIKIPFSGKPD-- 133 (197)
T ss_dssp EEEECSCCGGG---CSEEEEEE-EETTEEEEEEEEEEEEEEEEECCSSC---BTTBEEEEEETTCCCEEEEEEEEESC--
T ss_pred EEEECcCCHHh---CEEEEEEE-EECCCceeEEEEEEEcCCCcCCCCcc---ccccCeEEEeCCCEEEEEEEEEecCC--
Confidence 44555555554 57898874 3455654321 111111110000010 01235677889999999999876543
Q ss_pred CCCeEEEEecccCceeeEeeccCcceEee----cCceEEee-ecCCCCeEEEEEeCC---eeeEEEeeeec
Q psy10772 304 NQPMSWYHYSKDKGRYQIKFRSDKFIRTV----DGGLVIMA-VEELDAGKYDCWLGN---TVLCTHNLTVD 366 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~~~~~~~~~~----~~GLlI~~-v~~~DsG~Y~C~~~~---~~l~~~~~~v~ 366 (378)
|.++|+.++.. |. .+.++... ..-|.|.+ ++..|+|.|.|.+.| ..-++..|.|.
T Consensus 134 -p~i~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 134 -PVITWQKGQDL-----ID--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp -CEEEEEESSCE-----EC--SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -CcEEEEECCEE-----ee--cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 58999988753 43 33333321 23488889 999999999999987 55666666664
No 75
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.33 E-value=6.3e-07 Score=69.34 Aligned_cols=74 Identities=15% Similarity=0.241 Sum_probs=52.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCee-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV- 357 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~- 357 (378)
...+.+.+|+++.|.|...+.+. |.+.|+.++.+ +. .+ ...-|.|.+++.+|+|.|.|.+.|..
T Consensus 10 p~~~~v~~G~~~~l~C~~~g~p~---p~i~W~~~~~~-----~~--~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g 74 (91)
T 3bfo_A 10 PTSQKLMPGSTLVLQCVAVGSPI---PHYQWFKNELP-----LT--HE-----TKKLYMVPYVDLEHQGTYWCHVYNDRD 74 (91)
T ss_dssp CCCEEECTTSCEEEECEEECSSC---CEEEEEETTEE-----CT--TC-----CSSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred CCccEecCCCcEEEEEEeccCCC---CEEEEEcCCee-----CC--cC-----CCCeEEECCCCHHhCEEEEEEEEcCCC
Confidence 34567889999999999865444 58999987653 32 11 13469999999999999999998721
Q ss_pred ---eEEEeeeecc
Q psy10772 358 ---LCTHNLTVDA 367 (378)
Q Consensus 358 ---l~~~~~~v~~ 367 (378)
-....|.|.+
T Consensus 75 ~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 75 SQDSKKVEIIIDE 87 (91)
T ss_dssp EEECCCEEEEEC-
T ss_pred CEEeeeEEEEEeh
Confidence 1335555543
No 76
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.32 E-value=1.2e-06 Score=76.65 Aligned_cols=78 Identities=22% Similarity=0.272 Sum_probs=57.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec--C---ceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD--G---GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~--~---GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.+ +. .+.++.... + -|.|.+++..|+|.|.|.+.
T Consensus 125 ~~~~v~~g~~~~l~C~~~g~p~---p~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 194 (212)
T 2r15_A 125 DVVTIQEGKALNLTCNVWGDPP---PEVSWLKNEKA-----LA--QTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 194 (212)
T ss_dssp SEEEEETTCCEEEEEEEECSSC---CEEEEEETTEE-----EC--CCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CcEEEccCCeEEEEEEEcCCCC---ceEEEEECCeE-----Cc--cCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEE
Confidence 3567889999999999876544 67999998754 43 333333222 2 59999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|..
T Consensus 195 N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 195 NKYGSETSDFTVSVFI 210 (212)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEEc
Confidence 7 556666776653
No 77
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=7.7e-07 Score=69.55 Aligned_cols=61 Identities=21% Similarity=0.339 Sum_probs=47.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.+.|+.++.+ +. .. ...-|.|.+++.+|+|.|.|.+.|
T Consensus 18 ~~~~v~~G~~v~l~C~~~g~p~---~~v~W~k~~~~-----~~--~~-----~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 18 EGGAVAPGGTVTLTCEVPAQPS---PQIHWMKDGVP-----LP--LP-----PSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp TTSEECTTCEEEEECCCSSCSS---CCCCCEESSSB-----CS--SC-----CCSEEEEESCCTTTCEEEECEECC
T ss_pred CCCEEcCCCeEEEEEEEccCCC---CEEEEEECCEE-----Cc--CC-----CCCEEEECCCCcccCEEEEEEEEe
Confidence 3456889999999999865443 57999987654 32 11 245699999999999999999998
No 78
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.30 E-value=3.2e-06 Score=67.62 Aligned_cols=75 Identities=16% Similarity=0.246 Sum_probs=50.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec----CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD----GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~----~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+...++...|.. ...+|+.... .-|.|.+|+.+|+|
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 84 (108)
T 1jhl_L 8 PSYLVASPGETITINCRASKSI---SKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFA 84 (108)
T ss_dssp CSEEEECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCS
T ss_pred CCeeEEcCCCCEEEEeEECCCC---CceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCE
Confidence 3457889999999999986543 35799998753222111210 0123444332 13999999999999
Q ss_pred EEEEEeCCe
Q psy10772 348 KYDCWLGNT 356 (378)
Q Consensus 348 ~Y~C~~~~~ 356 (378)
.|.|.+.+.
T Consensus 85 ~Y~C~~~n~ 93 (108)
T 1jhl_L 85 MYICQQHNE 93 (108)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEccC
Confidence 999999874
No 79
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.30 E-value=2e-06 Score=70.92 Aligned_cols=90 Identities=20% Similarity=0.402 Sum_probs=54.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-cc----------CcceEee----c---CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-RS----------DKFIRTV----D---GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~~----------~~~~~~~----~---~GLlI~~v 341 (378)
..+++..|+++.|+|....++......|.|+.+........+.. .. .+|+... . --|.|.+|
T Consensus 8 ~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v 87 (123)
T 4gjt_B 8 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 87 (123)
T ss_dssp SEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEESC
T ss_pred CEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEECCC
Confidence 45788999999999987654442223578987643322211111 00 1232221 1 13999999
Q ss_pred cCCCCeEEEEEeCC----eeeEEEeeeecccc
Q psy10772 342 EELDAGKYDCWLGN----TVLCTHNLTVDAHS 369 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~----~~l~~~~~~v~~~~ 369 (378)
+.+|+|.|.|.... ..-+...|+|.+|-
T Consensus 88 ~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~~ 119 (123)
T 4gjt_B 88 VQADEGEYECRVSTFPAGSFQARLRLRVLEHH 119 (123)
T ss_dssp CSSSCSEEEEEEEESSSCEEEEEEEEEC----
T ss_pred ChHHCEEEEEEEEECCCCeEEeEEEEEEEECc
Confidence 99999999997643 44567788888763
No 80
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.29 E-value=9.7e-07 Score=79.45 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=69.8
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEE-EeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVF-VKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~-V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..++..| .+.|++. +-+..|.... +...+..+. .. ....+.+.+.+|+++.|.|...+.|.
T Consensus 70 ~L~I~~v~~~D---~G~Y~C~-a~n~~g~~~~~~~l~V~~p~-----~~---~~~~~~~~v~~g~~~~l~C~~~G~P~-- 135 (203)
T 4fa8_A 70 FLVVTAANISH---DGNYLCR-MKLGETEVTKQEHLSVVKPL-----TL---SVHSERSQFPDFSVLTVTCTVNAFPH-- 135 (203)
T ss_dssp EEEESSCCGGG---CEEEEEE-EEETTEEEEEEEEEEEEEEE-----EE---EEEEEECCSSCSCCEEEEEEEEEESC--
T ss_pred EEEEccCCHHH---CeEEEEE-EEcCCCcEEEEEEEEecCCc-----ee---eecceeEEEcCCCEEEEEEEcCCCCC--
Confidence 45666666655 6889987 4556676542 111121111 00 01234455678999999999976544
Q ss_pred CCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCC---eeeEEE
Q psy10772 304 NQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGN---TVLCTH 361 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~---~~l~~~ 361 (378)
|.|+|++++.... .....+.++....+| |.|.+++.+|+|.|.|.+.| +.-+.|
T Consensus 136 -P~v~W~~~~~~~~---~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v~ 196 (203)
T 4fa8_A 136 -PHVQWLMPEGVEP---APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGVY 196 (203)
T ss_dssp -CEEEECCC---------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEEE
T ss_pred -CEEEEEECCeeec---CcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEEE
Confidence 7899988754310 111234566666666 34468999999999999998 444444
No 81
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.28 E-value=4.1e-06 Score=66.14 Aligned_cols=75 Identities=24% Similarity=0.293 Sum_probs=49.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC-----------ceeeEeeccCcceEeec------CceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK-----------GRYQIKFRSDKFIRTVD------GGLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~-----------~~~~l~~~~~~~~~~~~------~GLlI~~v~ 342 (378)
+.+.+.+|+++.|+|.....+......|.|+.+.... +. .+......|+.... --|.|.+|+
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~-~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 80 (109)
T 2oyp_A 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDER-NVTYQKSSRYQLKGDLNKGDVSLIIKNVT 80 (109)
T ss_dssp EEEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSS-SEEEESCTTEEECSCGGGTBCCEEECSCC
T ss_pred CCEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCc-CccccccceEEEccCccCCcEeEEEccCC
Confidence 3567889999999999865433222358998865321 10 01111233443322 259999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 81 ~~D~G~Y~C~v~~ 93 (109)
T 2oyp_A 81 LDDHGTYCCRIQF 93 (109)
T ss_dssp GGGCEEEEEEECC
T ss_pred ChhCeEEEEEEEc
Confidence 9999999999987
No 82
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.28 E-value=2.1e-06 Score=77.21 Aligned_cols=87 Identities=20% Similarity=0.265 Sum_probs=56.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe--------ec--cCcceEe-ecC---ceEEeeecCCCC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK--------FR--SDKFIRT-VDG---GLVIMAVEELDA 346 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~--------~~--~~~~~~~-~~~---GLlI~~v~~~Ds 346 (378)
.+++..|+++.|+|........+.+.|+|+.++.+.....+. .+ ...++.. .+. -|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 568899999999997543334455789999887542111000 00 0111111 111 299999999999
Q ss_pred eEEEEEeCC---eeeEEEeeeecc
Q psy10772 347 GKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 347 G~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|.|.|.+.| ...+...|+|..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVK 105 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecC
Confidence 999999987 566677777754
No 83
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.28 E-value=2.2e-06 Score=73.81 Aligned_cols=83 Identities=24% Similarity=0.456 Sum_probs=59.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. +.+.|+.++.+ +. .+.++....+| |.|.+++..|+|.|.|.+.
T Consensus 14 ~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 14 MKDVTTKLGEAAQLSCQIVGRPL---PDIKWYRFGKE-----LI--QSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp CCCEEEETTSEEEEEEEEEEESC---CEEEEEETTEE-----EC--CCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred CCceEEeCCCcEEEEEEEecCCC---CEEEEEECCEE-----CC--CCccEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 45678899999999999865433 57999987654 42 33344443343 9999999999999999987
Q ss_pred C---eeeEEEeeeecccccC
Q psy10772 355 N---TVLCTHNLTVDAHSNV 371 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~c~ 371 (378)
+ ....+..|.|...+-.
T Consensus 84 n~~~~~~~~~~l~v~~~p~~ 103 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQATPQF 103 (197)
T ss_dssp CSSCEEEEEEEEEEEEEEEE
T ss_pred CCCCceeEEEEEEEEcCCCC
Confidence 6 4555666666654433
No 84
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.28 E-value=6.5e-07 Score=80.49 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=49.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cC--c---eEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DG--G---LVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~--G---LlI~~v~~~DsG~Y~C~ 352 (378)
...+.+.+|+.+.|.|.... .-|.|.|+|++|+.+ |. .++++... +. | |+|.+++.+|+|.|.|.
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~--~~P~p~i~W~kng~~-----l~--~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEK--LSGNAKVNYIFNEKE-----IF--EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp EEEEEECGGGCEEEEEECSC--CCSCCEEEEEETTEE-----EC--SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCceEEEeCCeEEEEEEEec--CCCCCEEEEEECCEE-----Cc--cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 34578899999999998742 123468999999875 53 33333322 22 3 99999999999999998
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
+.|
T Consensus 80 a~N 82 (207)
T 3rbs_A 80 LQD 82 (207)
T ss_dssp EEE
T ss_pred EEC
Confidence 766
No 85
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.27 E-value=1.7e-06 Score=74.57 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=67.7
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMAN 304 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~ 304 (378)
.+.+..+...| .+.|++. +....|....... .+. +. ..|..- .....+.+.+|+++.|.|...+.+.
T Consensus 59 ~L~i~~~~~~d---~G~Y~C~-~~~~~g~~~~~~~-~l~-v~-~~p~~~---~~~~~~~~~~g~~~~l~C~~~g~p~--- 125 (189)
T 2v44_A 59 RLTIYNANIED---AGIYRCQ-ATDAKGQTQEATV-VLE-IY-QKLTFR---EVVSPQEFKQGEDAEVVCRVSSSPA--- 125 (189)
T ss_dssp EEEECSCCGGG---CEEEEEE-EECTTSCEEEEEE-EEE-EE-CCCEEE---SCCCSEEEETTSCEEECCEEECSSC---
T ss_pred EEEEccCCccc---CeEEEEE-EEeCCCCcEEEEE-EEE-Ee-cCCcee---ecCCcEEEeCCCCEEEEEEECcCCC---
Confidence 44454554444 5789988 4555565432211 111 10 011100 1123456889999999999875443
Q ss_pred CCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 305 QPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 305 ~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
|.++|+.++.+ +....+.++.. .+..|.|.+++..|+|.|.|.+.|
T Consensus 126 p~v~W~~~~~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 172 (189)
T 2v44_A 126 PAVSWLYHNEE-----VTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRV 172 (189)
T ss_dssp CEEEEEEEC-------CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred CcEEEEECCcE-----EeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEc
Confidence 58999998765 33223344443 344699999999999999999976
No 86
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.26 E-value=4.9e-07 Score=70.74 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=53.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeee-cCCCCeEEEEEeCCee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV-EELDAGKYDCWLGNTV 357 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v-~~~DsG~Y~C~~~~~~ 357 (378)
.+-..+..|+++.|.|...+.+ +|+|+.++.+ |. .+ .+.-|.|.+| +.+|+|.|.|.+.. .
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P-----~i~W~kdg~~-----l~--~~-----~~~~L~I~~v~~~~DsG~Y~C~A~t-~ 67 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDE-----NLKWEKNGQE-----LP--QK-----HDKHLVLQDFSEVEDSGYYVCYTPA-S 67 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCS-----SCEEEETTEE-----CT--TC-----CSSCCBCCSCCTTTTCSCEEEECSS-C
T ss_pred CceeEEEcCCeEEEEEECCCCC-----cEEEEECCEE-----Cc--CC-----CCCEEEECccCccCcCEEEEEEEcc-C
Confidence 4556778899999999986442 4999998754 42 22 3456999996 77999999999975 2
Q ss_pred eEEEeeeeccccc
Q psy10772 358 LCTHNLTVDAHSN 370 (378)
Q Consensus 358 l~~~~~~v~~~~c 370 (378)
-..+-|-|++.-|
T Consensus 68 ~~~~~lylkarvc 80 (82)
T 3r08_E 68 NKNTYLYLKARVS 80 (82)
T ss_dssp TTCCCCCCTTSCS
T ss_pred CccEEEEEEEEeE
Confidence 2345566666555
No 87
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.26 E-value=4.2e-06 Score=67.34 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=58.8
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec---C---ceEEeeecCC
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD---G---GLVIMAVEEL 344 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~---~---GLlI~~v~~~ 344 (378)
..+.+.+.+|+++.|+|....... ...|.|+.+....+...|.. ...+|+.... . .|.|.+++.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 84 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWK--DYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMS 84 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGT--TSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcc--cceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHH
Confidence 345688999999999999864322 12599998753221111210 0123444331 2 4999999999
Q ss_pred CCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 345 DAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 345 DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|+|.|.|...+ ......+|+|..
T Consensus 85 DsG~Y~C~v~~~~~~~~~~v~L~V~~ 110 (113)
T 1zox_A 85 DAGIYWCGITKGGLDPMFKVTVNIGP 110 (113)
T ss_dssp GCEEEEEEECCSSSCCEEEEEEEEEC
T ss_pred HCEEEEEeeEcCCCCccEEEEEEEEc
Confidence 99999999987 467778888853
No 88
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.25 E-value=5.3e-06 Score=76.04 Aligned_cols=78 Identities=24% Similarity=0.471 Sum_probs=57.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.++|++++.+ |. .+.++..... -|.|.+++.+|+|.|.|.+.|
T Consensus 200 ~~~~~~~g~~v~l~C~~~g~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 269 (284)
T 2rik_A 200 HPVETLKGADVHLECELQGTPP---FQVSWHKDKRE-----LR--SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASN 269 (284)
T ss_dssp CCEEECTTCCEEEEEECBSSSC---CEEEEEETTEE-----EC--BTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CcceecCCCeEEEEEEEEecCC---CEEEEEECCEE-----Cc--CCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEe
Confidence 3466788999999999875543 68999998754 43 3333333222 488999999999999999987
Q ss_pred ---eeeEEEeeeecc
Q psy10772 356 ---TVLCTHNLTVDA 367 (378)
Q Consensus 356 ---~~l~~~~~~v~~ 367 (378)
..-++..|+|.+
T Consensus 270 ~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 270 DVGSYTCVGSITLKA 284 (284)
T ss_dssp TTEEEEEEEEEEECC
T ss_pred CCCceeEEEEEEEcC
Confidence 666777777753
No 89
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.25 E-value=2.8e-06 Score=71.53 Aligned_cols=84 Identities=17% Similarity=0.300 Sum_probs=57.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+. +.+.|+.+........| ...++|+....+| |.|.+++.+|+|.|.|.+.
T Consensus 24 p~~~~v~~G~~v~L~C~~~~~-----~~v~W~r~~~g~~~~~l-~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~ 97 (133)
T 3khq_A 24 PRFAAKKRSSMVKFHCYTNHS-----GALTWFRKRGSQQPQEL-VSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQK 97 (133)
T ss_dssp CSEEEECTTCCEEEEEEESSS-----SCEEEEEECTTSCCEEC-CCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEES
T ss_pred CceEEEeCCCeEEEEEEeCCC-----CEEEEEEeCCCCCCEEE-EEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEE
Confidence 456788899999999998654 37999988432221112 1234455544444 9999999999999999998
Q ss_pred Cee-------eEEEeeeeccc
Q psy10772 355 NTV-------LCTHNLTVDAH 368 (378)
Q Consensus 355 ~~~-------l~~~~~~v~~~ 368 (378)
|.. -+.-.|+|.+.
T Consensus 98 n~~g~~~~~~g~gt~L~V~~~ 118 (133)
T 3khq_A 98 CDSANHNVTDSCGTELLVLGF 118 (133)
T ss_dssp SCC-------CCCEEEEEC--
T ss_pred eCCCCcceeECCCEEEEEEec
Confidence 742 24467777763
No 90
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.24 E-value=4.4e-06 Score=68.85 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=58.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee---------------------ccC--cceEeec--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF---------------------RSD--KFIRTVD-- 333 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~---------------------~~~--~~~~~~~-- 333 (378)
.+.+.+.+|+++.|+|....+...+.+.|.|+.+........|.. .++ .|+....
T Consensus 11 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~ 90 (135)
T 1xt5_A 11 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 90 (135)
T ss_dssp CSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEESCTT
T ss_pred CceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEecCC
Confidence 456789999999999986532223345799999865422111110 011 4444332
Q ss_pred -CceEEeeecCCCCeEEEEEeCCe--------eeEEEeeeecc
Q psy10772 334 -GGLVIMAVEELDAGKYDCWLGNT--------VLCTHNLTVDA 367 (378)
Q Consensus 334 -~GLlI~~v~~~DsG~Y~C~~~~~--------~l~~~~~~v~~ 367 (378)
.-|.|.+|+.+|+|.|.|...+. ...+-.|.|.+
T Consensus 91 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 91 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred CCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 34999999999999999998862 23677777765
No 91
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.24 E-value=1.7e-06 Score=75.34 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=56.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee---eEeeccCcceEeecCc-eEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY---QIKFRSDKFIRTVDGG-LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~---~l~~~~~~~~~~~~~G-LlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|..- +...+.+.|+|++++..-..+ +.....++|+.+..+| |.|.+|+.+|+|.|.|.+.|
T Consensus 4 ~~v~~~~G~~v~L~c~~~-~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNF-QMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEEEETTSCEEECCTTC-CCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred eEEEEEcCCcEEEcCCCC-CcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEe
Confidence 457889999999999421 211223479999876420000 0011234555554444 99999999999999999986
Q ss_pred ---e--eeEEEeeeecc
Q psy10772 356 ---T--VLCTHNLTVDA 367 (378)
Q Consensus 356 ---~--~l~~~~~~v~~ 367 (378)
. .-....|.|..
T Consensus 83 ~~g~~~~~~~~~l~V~~ 99 (176)
T 1hng_A 83 TNGTRILNKALDLRILE 99 (176)
T ss_dssp TTCCEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEEEeC
Confidence 2 24556777765
No 92
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.23 E-value=7.4e-06 Score=70.40 Aligned_cols=124 Identities=20% Similarity=0.193 Sum_probs=74.6
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEE-EeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVF-VKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~-V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..+...| .+.|++.. -...|.... +...+.... ..-........+.+..|+++.|.|...+.+.
T Consensus 64 ~L~i~~~~~~d---~G~Y~C~~-~n~~~~~~~~~~l~v~~~p-----~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-- 132 (197)
T 3lcy_A 64 TLTVMTEEQED---EGVYTCIA-TNEVGEVETSSKLLLQATP-----QFHPGYPLKEKYYGAVGSTLRLHVMYIGRPV-- 132 (197)
T ss_dssp EEEEECCSGGG---CEEEEEEE-ECSSCEEEEEEEEEEEEEE-----EECTTSCCCSEEEEETTSCEEEEEEEEEESC--
T ss_pred EEEEecCCccC---CEEEEEEE-ECCCCceeEEEEEEEEcCC-----CCCCCccCCcceeecCCCeEEEEEEEeeeeC--
Confidence 45555555554 57898874 344555431 111111110 0000001234567788999999999865443
Q ss_pred CCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecC-CCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 304 NQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEE-LDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~-~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|.++|+.++.. +. .+.++..... -|.|.+++. +|+|.|.|.+.| ..-.+..|.|.+
T Consensus 133 -p~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 133 -PAMTWFHGQKL-----LQ--NSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp -CEEEEEETTEE-----CC--CCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred -CeeEEeECCEE-----CC--CCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 68999987653 32 3334333332 399999985 899999999988 566677777654
No 93
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.21 E-value=2e-06 Score=74.20 Aligned_cols=76 Identities=24% Similarity=0.242 Sum_probs=54.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.+ +. .+.++....+ -|.|.+++..|+|.|.|.+.|
T Consensus 111 ~~~~~~~g~~~~l~C~~~g~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 180 (194)
T 2a38_A 111 QSMTVRQGSQVRLQVRVTGIPT---PVVKFYRDGAE-----IQ--SSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATN 180 (194)
T ss_dssp CCEEECTTEEEEEEEEEEEESC---CEEEEEETTEE-----CC--CSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEE
T ss_pred ccEEEcCCCEEEEEEEEEEecC---CeEEEEECCEE-----CC--CCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEe
Confidence 3567888999999999875443 57999998754 32 3333333333 399999999999999999987
Q ss_pred ---eeeEEEeeee
Q psy10772 356 ---TVLCTHNLTV 365 (378)
Q Consensus 356 ---~~l~~~~~~v 365 (378)
..-.+..|.|
T Consensus 181 ~~g~~~~~~~l~V 193 (194)
T 2a38_A 181 SVGRATSTAELLV 193 (194)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 4455555555
No 94
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.21 E-value=7.5e-06 Score=72.22 Aligned_cols=80 Identities=25% Similarity=0.357 Sum_probs=58.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.. +.. .+.++...+.-|.|.+++.+|+|.|.|.+.| .
T Consensus 118 ~~~~~~~g~~v~l~C~~~g~p~---p~i~W~~~~~~-----~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 188 (212)
T 2yd1_A 118 GTRVIEVGHTVLMTCKAIGNPT---PNIYWIKNQTK-----VDM-SNPRYSLKDGFLQIENSREEDQGKYECVAENSMGT 188 (212)
T ss_dssp CCEEEETTCCEEECCEEECSSC---CEEEEEETTEE-----CCT-TSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CceEeecCCeEEEEEEeccCCC---CeEEEEECCeE-----ccc-CCCeEEccCCeEEEccCChhhCEEEEEEeecCCCc
Confidence 4567788999999999875543 57999998754 321 2334555566799999999999999999987 3
Q ss_pred eeEE-Eeeeeccc
Q psy10772 357 VLCT-HNLTVDAH 368 (378)
Q Consensus 357 ~l~~-~~~~v~~~ 368 (378)
..++ ..|.|...
T Consensus 189 ~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 189 EHSKATNLYVKVR 201 (212)
T ss_dssp EECCCEEEEEEC-
T ss_pred eeEEEEEEEEEec
Confidence 3332 67777654
No 95
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.19 E-value=1.4e-06 Score=75.22 Aligned_cols=78 Identities=19% Similarity=0.320 Sum_probs=55.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cCceEEeeecCCCCeEEEEEeCCee-
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DGGLVIMAVEELDAGKYDCWLGNTV- 357 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C~~~~~~- 357 (378)
....+.+|+++.|.|...+.+. |.++|+.++.. +....+.++... +..|.|.+++.+|+|.|.|.+.|..
T Consensus 108 ~~~~~~~g~~~~l~C~~~g~p~---~~v~W~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 179 (191)
T 1epf_A 108 TPQEFKEGEDAVIVCDVVSSLP---PTIIWKHKGRD-----VILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR 179 (191)
T ss_dssp SSEECCTTSCEEECCEEECSSC---CEEEEEETTEE-----GGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGG
T ss_pred CcEeecCCCeEEEEEEECCCCC---CEEEEEECCEE-----eeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecc
Confidence 3456778999999999875443 68999998754 322223344443 4459999999999999999999833
Q ss_pred --eEEEeeee
Q psy10772 358 --LCTHNLTV 365 (378)
Q Consensus 358 --l~~~~~~v 365 (378)
+.+..++|
T Consensus 180 ~~~~~~~i~v 189 (191)
T 1epf_A 180 GEINFKDIQV 189 (191)
T ss_dssp TEEEEEEEEE
T ss_pred eeEEEEEEEE
Confidence 55555554
No 96
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.19 E-value=4.8e-06 Score=67.23 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=49.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-----eccCcceEeecC-------ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-----FRSDKFIRTVDG-------GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-----~~~~~~~~~~~~-------GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|...... +.|.|+.+....+...|. ...+.|+....+ -|.|.+|+.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~----~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~Ds 83 (113)
T 1h5b_A 8 PSALSLHEGTDSALRCNFTTTM----RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDS 83 (113)
T ss_dssp CSEEEEETTCCEEEEEEESSCC----SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGC
T ss_pred CCEEEEecCCcEEEEEEECCCC----ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhC
Confidence 3457889999999999986432 379999875332221111 012334444332 499999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 84 G~Y~C~~~n 92 (113)
T 1h5b_A 84 GTYFCAAEA 92 (113)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999999876
No 97
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.19 E-value=1e-06 Score=73.47 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=49.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c--cCcceEe-------ecCceEEeeecCCCCeE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R--SDKFIRT-------VDGGLVIMAVEELDAGK 348 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~--~~~~~~~-------~~~GLlI~~v~~~DsG~ 348 (378)
...+.+.+|+++.|.|...+.+. |.|.|+.++.......... . ...++.. ...-|.|.+++.+|+|.
T Consensus 28 p~~~~v~~G~~v~L~C~~~g~P~---p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 104 (137)
T 3qr2_A 28 PLSQQRWVGGSVELHCEAVGSPV---PEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGT 104 (137)
T ss_dssp CCCEEEETTSCEEEEEEEECSSC---CEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEE
T ss_pred CCCEEEeCCCCEEEEEEEeeecC---CeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEE
Confidence 45678889999999999876543 6899999875411000000 0 0011111 23459999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.|
T Consensus 105 Y~C~a~N 111 (137)
T 3qr2_A 105 YECRASN 111 (137)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999987
No 98
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.18 E-value=4.5e-06 Score=77.54 Aligned_cols=78 Identities=23% Similarity=0.269 Sum_probs=58.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC-----ceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG-----GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~-----GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+.+|+++.|.|...+.+. |.++|++++.+ |. .+.++..... -|.|.+++..|+|.|.|.+.
T Consensus 230 ~~~~v~~g~~~~l~C~~~g~p~---p~i~W~~~g~~-----~~--~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 299 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVWGDPP---PEVSWLKNEKA-----LA--SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 299 (317)
T ss_dssp SEEEEETTSBBCEEEEEECSSC---CEEEEEESSSE-----EC--CCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEE
T ss_pred ccEEEEcCCEEEEEEEEecCCC---CEEEEEECCEe-----CC--CCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 3567889999999999875544 58999998764 43 3444333322 49999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|..
T Consensus 300 N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 300 NKYGSETSDFTVSVFI 315 (317)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCeEEEEEEEEEEc
Confidence 7 566777777753
No 99
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.18 E-value=1.3e-06 Score=70.49 Aligned_cols=69 Identities=19% Similarity=0.349 Sum_probs=47.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc----CcceEeecCceEEee-----ecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS----DKFIRTVDGGLVIMA-----VEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~----~~~~~~~~~GLlI~~-----v~~~DsG~Y 349 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.+ +.... ..+....++.+.+.. ++.+|+|.|
T Consensus 16 p~~~~v~~G~~v~L~C~~~g~P~---p~v~W~k~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y 87 (117)
T 2v9t_A 16 PSDLIVSKGEPATLNCKAEGRPT---PTIEWYKGGER-----VETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (117)
T ss_dssp CCCEEECTTCCEEECCEEEEESC---CEEEEEETTEE-----CCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEE
T ss_pred CCCEEEcCCCcEEEEEECCccCC---CeEEEEECCEe-----ccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEE
Confidence 34677889999999999876544 67999998754 32111 012223344455554 479999999
Q ss_pred EEEeCC
Q psy10772 350 DCWLGN 355 (378)
Q Consensus 350 ~C~~~~ 355 (378)
.|.+.|
T Consensus 88 ~C~a~N 93 (117)
T 2v9t_A 88 VCVARN 93 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999997
No 100
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.17 E-value=3.4e-06 Score=74.65 Aligned_cols=83 Identities=19% Similarity=0.237 Sum_probs=56.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE--ecccCceeeEe--------eccCcceEeecCc-eEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH--YSKDKGRYQIK--------FRSDKFIRTVDGG-LVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~--~~~~~~~~~l~--------~~~~~~~~~~~~G-LlI~~v~~~DsG 347 (378)
...+.+..|+++.|.|... +..-+.+.|+|++ ++.. |. ...++|+....+| |.|.+|+..|+|
T Consensus 6 ~~~v~g~~G~sv~L~~~~~-~~~~~~~~i~W~k~~~~~~-----i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG 79 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSF-QMSDDIDDIKWEKTSDKKK-----IAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQD 79 (182)
T ss_dssp CEEEEEETTSCEEECCTTC-CCCSSEEEEEEEEGGGCCE-----EEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCE
T ss_pred ccEEEEecCCCEEEeCCcc-cccCcCCEEEEEECCCCcE-----EEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCE
Confidence 3568899999999999431 2111224799998 6542 31 0134565555555 999999999999
Q ss_pred EEEEEeCCe-----eeEEEeeeecc
Q psy10772 348 KYDCWLGNT-----VLCTHNLTVDA 367 (378)
Q Consensus 348 ~Y~C~~~~~-----~l~~~~~~v~~ 367 (378)
.|.|.+.+. .-..+.|.|.+
T Consensus 80 ~Y~c~~~n~~g~~~~~~~~~L~V~~ 104 (182)
T 1hnf_A 80 IYKVSIYDTKGKNVLEKIFDLKIQE 104 (182)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCceeEEEEEEEEEcC
Confidence 999998651 12567787765
No 101
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.17 E-value=2.6e-06 Score=73.13 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=54.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC--ceEEeeecCCCCeEEEEEeCC-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG--GLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~--GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
...+.+.+|+++.|.|...+.+. +.++|+.++.. +. .+.++....+ .|.|.+++..|+|.|.|.+.+
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 11 SFNATAERGEEMTFSCRASGSPE---PAISWFRNGKL-----IE--ENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp EEEEETTSCCCEEEECEEECSSC---CEEEEEETTEE-----CC--CSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CcEEEEecCCCEEEEEeeccCCC---CeEEEEECCeE-----cC--CCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 34577888999999999865433 57999988753 32 3333333322 399999999999999999975
Q ss_pred --eeeEEEeeeec
Q psy10772 356 --TVLCTHNLTVD 366 (378)
Q Consensus 356 --~~l~~~~~~v~ 366 (378)
....+..|.|.
T Consensus 81 ~~~~~~~~~l~V~ 93 (192)
T 2va4_A 81 AGEDEKQAFLQVF 93 (192)
T ss_dssp TEEEEEEEEEEEE
T ss_pred ccccceEEEEEEE
Confidence 33344555554
No 102
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.17 E-value=4.4e-06 Score=66.96 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=56.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC-CCCCeEEEEecccCc--eeeEee------------ccCcceEeec-------Cce
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM-ANQPMSWYHYSKDKG--RYQIKF------------RSDKFIRTVD-------GGL 336 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L-a~~~v~W~~~~~~~~--~~~l~~------------~~~~~~~~~~-------~GL 336 (378)
...+.+.+|+++.|+|.....+.. ..+.|.|++++.... ...+.. ....|+.... .-|
T Consensus 12 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL 91 (126)
T 1eaj_A 12 EEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASI 91 (126)
T ss_dssp EEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCE
T ss_pred CceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEE
Confidence 466789999999999998654331 112499998863210 011110 1123443333 349
Q ss_pred EEeeecCCCCeEEEEEeCC---eeeEEEeeeec
Q psy10772 337 VIMAVEELDAGKYDCWLGN---TVLCTHNLTVD 366 (378)
Q Consensus 337 lI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~ 366 (378)
.|.+|+.+|+|.|.|...+ ..-....|+|.
T Consensus 92 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 92 NVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EECcCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 9999999999999999876 33456666664
No 103
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.17 E-value=1e-05 Score=71.11 Aligned_cols=74 Identities=16% Similarity=0.271 Sum_probs=50.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+ .+.|.|+.+........+... .++|+..... -|.|.+|+.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQASQSI---SSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAA 84 (213)
T ss_dssp CSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCeEEEcCCCCEEEEEEecCCC---CceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCE
Confidence 4567899999999999986553 368999886432221111110 1234443333 3999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 85 ~Y~C~~~~ 92 (213)
T 3nl4_L 85 TYYCQSTY 92 (213)
T ss_dssp EEEEEECC
T ss_pred EEEEecCC
Confidence 99999987
No 104
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.16 E-value=5e-06 Score=70.07 Aligned_cols=84 Identities=24% Similarity=0.309 Sum_probs=56.1
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc----CceeeEeeccCcceEee-----cCceEEeeecCCCCeE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD----KGRYQIKFRSDKFIRTV-----DGGLVIMAVEELDAGK 348 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~----~~~~~l~~~~~~~~~~~-----~~GLlI~~v~~~DsG~ 348 (378)
..+.+.+.+|+++.|.|...+.+. +.|.|+..+.. +....+ .++|+... ...|.|.+|+.+|+|.
T Consensus 44 ~p~~~~v~~G~~v~L~C~~~~~~~---~~i~W~~~~~~~i~~~~~~~~---~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 44 WTSDETVVAGGTVVLKCQVKDHED---SSLQWSNPAQQTLYFGEKRAL---RDNRIQLVTSTPHELSISISNVALADEGE 117 (145)
T ss_dssp BCCCEEEETTSCEEEEEECSCCTT---CCEEEECTTCCEEEETTEECS---CCTTEEEEEECSSEEEEEECSCCGGGCEE
T ss_pred CCceEEEEcCCCEEEEEEEcCCCC---cEEEEECCCCcEEEECCceec---ccCCEEEecCCCCeEEEEECCCChhhCEE
Confidence 356788999999999999875543 57999832211 000001 23343332 2459999999999999
Q ss_pred EEEEeCC--eeeEEEeeeecc
Q psy10772 349 YDCWLGN--TVLCTHNLTVDA 367 (378)
Q Consensus 349 Y~C~~~~--~~l~~~~~~v~~ 367 (378)
|.|.+.+ ..-....|+|.+
T Consensus 118 Y~C~~~n~~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 118 YTCSIFTMPVRTAKSLVTVLG 138 (145)
T ss_dssp EEEEECSSSCEEEEEEEEEEC
T ss_pred EEEEEEcCCCceEEEEEEEEe
Confidence 9999987 345556677765
No 105
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.15 E-value=3.5e-06 Score=74.70 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=57.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee----cCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV----DGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~----~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+.+.+|+++.|.|...+.+. |.|+|++++.. |......++... ..-|.|.+++..|+|.|.|.+.|
T Consensus 26 ~~~~~~~G~~v~l~C~~~g~p~---p~i~W~~~g~~-----l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 97 (215)
T 3mtr_A 26 VAVYTWEGNQVNITCEVFAYPS---ATISWFRDGQL-----LPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVN 97 (215)
T ss_dssp SEEEECTTCCEEEEEEEEEESC---CEEEEEETTEE-----SSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEEC
T ss_pred ceEEEECCCCEEEEEEEeecCC---CEEEEEECCeE-----CCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEE
Confidence 4578889999999999876544 58999998754 321111233332 23499999999999999999987
Q ss_pred ---eeeEEEeeeecc
Q psy10772 356 ---TVLCTHNLTVDA 367 (378)
Q Consensus 356 ---~~l~~~~~~v~~ 367 (378)
..-++..|.|.+
T Consensus 98 ~~g~~~~~~~l~v~~ 112 (215)
T 3mtr_A 98 RIGQESLEFILVQAD 112 (215)
T ss_dssp SSCEEEEEEEEEECC
T ss_pred CCCceEEEEEEEECC
Confidence 555667777754
No 106
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.15 E-value=3.6e-06 Score=72.87 Aligned_cols=83 Identities=25% Similarity=0.336 Sum_probs=58.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--ecC---ceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--VDG---GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~~~---GLlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.+ +.. .+.++.. ..+ -|.|.+++..|+|.|.|.+
T Consensus 11 ~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (197)
T 2j8h_A 11 LRNLNVRYQSNATLVCKVTGHPK---PIVKWYRQGKE-----IIA-DGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (197)
T ss_dssp CCCEEEETTSCEEEEEEEECSSC---CEEEEEETTEE-----CCC-CSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEE
T ss_pred CCccEEcCCCEEEEEEEEeecCC---CEEEEEECCEE-----Ccc-CCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEE
Confidence 35678899999999999875443 57999998754 321 1222222 233 4999999999999999998
Q ss_pred CC---eeeEEEeeeeccccc
Q psy10772 354 GN---TVLCTHNLTVDAHSN 370 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~~~c 370 (378)
.+ ....+..|.|...+.
T Consensus 82 ~n~~g~~~~~~~l~V~~~p~ 101 (197)
T 2j8h_A 82 TNQGGSVSGTASLEVEVPAK 101 (197)
T ss_dssp EETTEEEEEEEEEEEEEEEE
T ss_pred EECCCceeEEEEEEEcCCCc
Confidence 76 445666777765443
No 107
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.15 E-value=7.8e-06 Score=71.13 Aligned_cols=88 Identities=19% Similarity=0.254 Sum_probs=62.5
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee-----eEeeccCcceEeecCceEEeeecCCCCeEEEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY-----QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~-----~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
....+.+.+|+++.|.|...+.+. +.+.|+.++.....+ .+....+.++......|.|.+++..|+|.|.|.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~ 83 (212)
T 1f97_A 7 AQSDVQVPENESIKLTCTYSGFSS---PRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCM 83 (212)
T ss_dssp SCSEEEEETTCCEEEECEEESCSS---EEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEE
T ss_pred cCCCeEEEcCCCEEEEeEeCCCCC---cEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEE
Confidence 346678999999999999875333 589999987641000 011123456666677899999999999999999
Q ss_pred eCC-----eeeEEEeeeeccc
Q psy10772 353 LGN-----TVLCTHNLTVDAH 368 (378)
Q Consensus 353 ~~~-----~~l~~~~~~v~~~ 368 (378)
+.+ ..-....|.|...
T Consensus 84 ~~~~~g~~~~~~~~~l~V~~~ 104 (212)
T 1f97_A 84 VSEEGGQNYGEVSIHLTVLVP 104 (212)
T ss_dssp EEETTSSSEEEEEEEEEEEBC
T ss_pred EEccCCCcccEEEEEEEEEcC
Confidence 876 3456667777654
No 108
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.15 E-value=4.6e-06 Score=72.55 Aligned_cols=75 Identities=16% Similarity=0.272 Sum_probs=53.1
Q ss_pred EEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---eeeE
Q psy10772 284 VTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TVLC 359 (378)
Q Consensus 284 ~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l~ 359 (378)
+.+|+++.|.|.. .+.+ .|.++|+.++... .+. ...+....+.-|.|.+++.+|+|.|.|.+.| ..-+
T Consensus 133 ~~~g~~v~l~C~~~~g~p---~~~v~W~~~~~~~---~~~--~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~ 204 (214)
T 3jz7_A 133 EEIGNDFKLKCEPKEGSL---PLQFEWQKLSDSQ---TMP--TPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQC 204 (214)
T ss_dssp CBTTCCEEEEEECSBCCS---SCEEEEEECSTTC---CCC--GGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred eecCCcEEEEecCCCCCC---CCEEEEEECCCCC---ccC--ccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEE
Confidence 6779999999998 4333 3689999865431 121 2222223345699999999999999999988 5667
Q ss_pred EEeeeec
Q psy10772 360 THNLTVD 366 (378)
Q Consensus 360 ~~~~~v~ 366 (378)
+..|.|.
T Consensus 205 ~~~l~V~ 211 (214)
T 3jz7_A 205 MLRLDVV 211 (214)
T ss_dssp EEEECCB
T ss_pred EEEEEEe
Confidence 7777765
No 109
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.14 E-value=9.5e-06 Score=70.17 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=55.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-ccCcceEeecC----ceEEeeec-CCCCeEEEEEe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-RSDKFIRTVDG----GLVIMAVE-ELDAGKYDCWL 353 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~~~~~~~~~~~----GLlI~~v~-~~DsG~Y~C~~ 353 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++... .+.. ..+.++....+ -|.|.+++ ..|+|.|.|.+
T Consensus 100 ~~~~~~~g~~v~l~C~~~g~p~---p~i~W~~~~~g~---~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a 173 (190)
T 2wv3_A 100 RSENKNEGQDAMMYCKSVGYPH---PEWMWRKKENGV---FEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNA 173 (190)
T ss_dssp SEEEEETTSCEEEEEEEECSSC---CEEEEEEEETTE---EEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEE
T ss_pred CcceeeCCCcEEEEEEeCccCC---CceEEEEcCCCc---eeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEE
Confidence 4567889999999999875543 589999853220 1222 13334444332 29999999 79999999999
Q ss_pred CC---eeeEEEeeeec
Q psy10772 354 GN---TVLCTHNLTVD 366 (378)
Q Consensus 354 ~~---~~l~~~~~~v~ 366 (378)
.| ..-++..|.|.
T Consensus 174 ~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 174 TNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSSCEEEEEEEEEEE
T ss_pred EecCCcceeEEEEEEE
Confidence 87 55566666653
No 110
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.14 E-value=8.4e-06 Score=65.44 Aligned_cols=74 Identities=14% Similarity=0.238 Sum_probs=50.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec----CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD----GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~----~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|+|.....+ .+.|.|+.+....+...|-. ..++|+.... --|.|.+++.+|+|
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 86 (109)
T 2q20_A 10 PSSLSASVGDRVTITCQASQDI---SNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIA 86 (109)
T ss_dssp CSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCEEEecCCCcEEEEEeeccCC---CCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCE
Confidence 3567899999999999986543 35799998753222111210 0123444321 13999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 87 ~Y~C~~~~ 94 (109)
T 2q20_A 87 TYYCQQYD 94 (109)
T ss_dssp EEEEEECS
T ss_pred EEEEEEee
Confidence 99999986
No 111
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.14 E-value=4.8e-06 Score=71.53 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=55.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeec-CCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVE-ELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~-~~DsG~Y~C~~~ 354 (378)
....+.+|+++.|.|...+.+. .|.++|+........ .+....+.++....+ -|.|.+++ ..|+|.|.|.+.
T Consensus 91 ~~~~~~~g~~~~l~C~~~g~p~--~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 167 (184)
T 3b5h_A 91 SSEHINEGETAMLVCKSESVPP--VTDWAWYKITDSEDK-ALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGT 167 (184)
T ss_dssp SEEEECTTSCEEEEEECCCSSC--CCEEEEEECCSSSCE-ECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEE
T ss_pred CCcEEcCCCcEEEEEEECCCCC--CCeEEEEEcCCCCCE-EeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEE
Confidence 4567888999999999865541 358999983211110 121112234443333 39999999 999999999999
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|.+
T Consensus 168 N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 168 SSKGSDQAIITLRVRS 183 (184)
T ss_dssp ETTEEEEEEEEEEEC-
T ss_pred eCCCcceEEEEEEEec
Confidence 7 556667777653
No 112
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.14 E-value=4.3e-06 Score=67.75 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=50.7
Q ss_pred CeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--------ecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 288 QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--------VDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 288 ~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--------~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
....|.|...+.+. |.++|+.++.+ +. .+.++.. ...-|.|.+++.+|+|.|.|.+.| .
T Consensus 21 ~~~~l~C~~~g~P~---p~i~W~k~g~~-----l~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 90 (118)
T 1wwc_A 21 LEHCIEFVVRGNPP---PTLHWLHNGQP-----LR--ESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGT 90 (118)
T ss_dssp CEEEEEEEEECSSC---CEEEEEETTEE-----CC--CSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEE
T ss_pred cceEEEEEeeeeCC---CeEEEEECCEE-----CC--CCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCe
Confidence 45678899987554 68999998754 32 2222111 233599999999999999999998 5
Q ss_pred eeEEEeeeecccc
Q psy10772 357 VLCTHNLTVDAHS 369 (378)
Q Consensus 357 ~l~~~~~~v~~~~ 369 (378)
..++..|.|...+
T Consensus 91 ~~~~~~l~v~~~P 103 (118)
T 1wwc_A 91 ANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEEECCSCCC
T ss_pred EeeEEEEEEccCC
Confidence 6667776665543
No 113
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.13 E-value=3.6e-06 Score=74.28 Aligned_cols=82 Identities=22% Similarity=0.315 Sum_probs=57.9
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcc----eEe-ecCceEEeeecCCCCeEEEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF----IRT-VDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~----~~~-~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
..+.+.+.+|+++.|.|...+.+. +.++|++++.+ +. .+.+ ... ...-|.|.+++..|+|.|.|.
T Consensus 25 ~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (231)
T 3ojm_B 25 EKRLHAVPAANTVKFRCPAGGNPM---PTMRWLKNGKE-----FK--QEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 94 (231)
T ss_dssp CCSCEEEETTSCEEEECCEEEESC---CEEEEEETTEE-----CC--GGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CceeEEEccCCCEEEEEecccCCC---CeEEEEECCcc-----cc--ccccccceeeecCcceEEEecCCcccCEEEEEE
Confidence 346788999999999999875433 57999998754 32 1111 111 222499999999999999999
Q ss_pred eCC---eeeEEEeeeecccc
Q psy10772 353 LGN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~~~ 369 (378)
+.+ ..-....|.|....
T Consensus 95 ~~n~~~~~~~~~~l~V~~~~ 114 (231)
T 3ojm_B 95 VENEYGSINHTYHLDVVERS 114 (231)
T ss_dssp EEETTEEEEEEEEEEEECCC
T ss_pred EecccCcccccEEEEEEcCC
Confidence 976 44566777776543
No 114
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.13 E-value=5.3e-06 Score=71.43 Aligned_cols=81 Identities=21% Similarity=0.288 Sum_probs=58.1
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE-ecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH-YSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~-~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~ 352 (378)
....+.+.+|+++.|.|...+.+. .++|+. ++.. +. .+.++....+ -|.|.+++..|+|.|.|.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~p~----~v~W~~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 76 (189)
T 2v44_A 8 SLSKVELSVGESKFFTCTAIGEPE----SIDWYNPQGEK-----II--STQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 76 (189)
T ss_dssp SCSEEEEETTCCEEEEEEEEECCS----EEEEECTTSCB-----CC--CCSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred cCCceEEecCCcEEEEEEeecCCe----eEEEEeCCCCc-----cC--CCceEEEECCCCeEEEEEccCCcccCeEEEEE
Confidence 345678899999999999865543 699998 4432 32 3444444443 499999999999999999
Q ss_pred eCCe----eeEEEeeeecccc
Q psy10772 353 LGNT----VLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~~----~l~~~~~~v~~~~ 369 (378)
+.+. .-....|.|....
T Consensus 77 ~~~~~g~~~~~~~~l~v~~~p 97 (189)
T 2v44_A 77 ATDAKGQTQEATVVLEIYQKL 97 (189)
T ss_dssp EECTTSCEEEEEEEEEEECCC
T ss_pred EEeCCCCcEEEEEEEEEecCC
Confidence 9872 2456677776544
No 115
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.12 E-value=5.8e-06 Score=67.74 Aligned_cols=86 Identities=23% Similarity=0.210 Sum_probs=55.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe---------e---ccCcceEeecCc-eEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK---------F---RSDKFIRTVDGG-LVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~---------~---~~~~~~~~~~~G-LlI~~v~~~D 345 (378)
.....+.+|+++.|.|.. .|.++ +.++|+..........|. . .-.+|..+..+| |+|.+|+.+|
T Consensus 7 ~~p~~~~~G~~v~L~~~~-~p~~~--~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D 83 (111)
T 2qsq_A 7 STPFNVAEGKEVLLLVHN-LPQHL--FGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQND 83 (111)
T ss_dssp EESSEEETTSCEEEEEES-CCSSE--EEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGG
T ss_pred eccceeccCCCEEEEEeC-CCCCc--eEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccC
Confidence 334578999999999974 24332 258997643211000111 0 114566666656 9999999999
Q ss_pred CeEEEEEeCCe----eeEEEeeeecc
Q psy10772 346 AGKYDCWLGNT----VLCTHNLTVDA 367 (378)
Q Consensus 346 sG~Y~C~~~~~----~l~~~~~~v~~ 367 (378)
+|.|.|...+. .-+...|.|..
T Consensus 84 ~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 84 AGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp CEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 99999998862 34556676653
No 116
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.12 E-value=6.3e-06 Score=70.54 Aligned_cols=80 Identities=28% Similarity=0.352 Sum_probs=56.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE--ee----cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR--TV----DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~--~~----~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.. +. ...+.. .. ..-|.|.+++..|+|.|.|.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~p~---~~v~W~k~~~~-----~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 9 PVKLTVSQGQPVKLNCSVEGMEE---PDIQWVKDGAV-----VQ--NLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp CEEEEEETTCCEEEEEEEESCSS---CCEEEEETTEE-----CC--SSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CcceEEeCCCcEEEEEEEeCCCC---CeEEEEECCee-----cC--CCCceEEEecCCCceEEEEEeecCcccCeEEEEE
Confidence 45678999999999999875333 58999987654 22 122211 11 13488999999999999999
Q ss_pred eCCe----eeEEEeeeeccc
Q psy10772 353 LGNT----VLCTHNLTVDAH 368 (378)
Q Consensus 353 ~~~~----~l~~~~~~v~~~ 368 (378)
+.+. .-....|.|...
T Consensus 79 ~~~~~~~~~~~~~~l~V~~~ 98 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEGV 98 (182)
T ss_dssp ESSCTTCEECCCEEEEEECS
T ss_pred EEcCCCcEEEEEEEEEEecC
Confidence 9873 335666777643
No 117
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.12 E-value=3.8e-06 Score=80.58 Aligned_cols=76 Identities=24% Similarity=0.390 Sum_probs=60.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
...+..|+++.|.|...+.+. |.++|++++.+ |. .+.++...+.-|.|.+++.+|+|.|.|.+.| ..
T Consensus 303 ~~~~~~g~~~~l~C~~~g~p~---p~v~W~~~g~~-----~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 372 (382)
T 1cs6_A 303 DTEADIGSDLRWSCVASGKPR---PAVRWLRDGQP-----LA--SQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTV 372 (382)
T ss_dssp CEEEETTCCEEEECEEEEESC---CEEEEEETTEE-----CC--CCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ccEEcCCCeEEEEEEeeeecC---CEEEEEECCEE-----CC--CCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeE
Confidence 456788999999999876544 58999998754 43 4556666677799999999999999999987 56
Q ss_pred eEEEeeeec
Q psy10772 358 LCTHNLTVD 366 (378)
Q Consensus 358 l~~~~~~v~ 366 (378)
-++..|.|.
T Consensus 373 ~~~~~l~V~ 381 (382)
T 1cs6_A 373 YASAELTVQ 381 (382)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 677777775
No 118
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.11 E-value=2e-06 Score=67.54 Aligned_cols=74 Identities=18% Similarity=0.298 Sum_probs=48.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-------eecCceEEeeecCCCCeEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-------TVDGGLVIMAVEELDAGKYDC 351 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-------~~~~GLlI~~v~~~DsG~Y~C 351 (378)
...+.+.+|+++.|.|...+.+.. .+.++|+.++.+....... ...++. ....-|.|.+++..|+|.|.|
T Consensus 17 p~~~~v~~G~~v~L~C~~~~~~~~-~~~i~W~k~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 93 (112)
T 3so5_A 17 PETQSAIXGSDVSFTCSAASSSDS-PMTFAWXXDNEALQDAEME--NYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQC 93 (112)
T ss_dssp CCCEEECTTCCEEEEEEEEESCCC-CCEEEEEETTEECTTCEEE--EEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEE
T ss_pred CCCcEEECCCCEEEEEEEecCCCC-CEEEEEccCCccccccccc--ceeeeeccCCCccccceEEEEeccccccCCeEEE
Confidence 345688899999999998744332 2579999887541100000 001111 112459999999999999999
Q ss_pred EeCC
Q psy10772 352 WLGN 355 (378)
Q Consensus 352 ~~~~ 355 (378)
.+.|
T Consensus 94 ~a~n 97 (112)
T 3so5_A 94 VISN 97 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 119
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.11 E-value=8.6e-06 Score=65.26 Aligned_cols=73 Identities=21% Similarity=0.326 Sum_probs=49.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|.....+ .+.|.|+.+....+...|... ..+|+..... -|.|.+|+.+|+|.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (108)
T 1qfw_M 9 KSMSMSVGERVTLSCKASETV---DSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFAD 85 (108)
T ss_dssp SCEECCTTCCEEEEEEESSCC---CSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSE
T ss_pred CeEEEcCCCCEEEEeeeCCCC---CcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEE
Confidence 457788999999999986443 247999987532221112100 1234443322 39999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.+
T Consensus 86 Y~C~~~~ 92 (108)
T 1qfw_M 86 YHCGQTY 92 (108)
T ss_dssp EEEEECS
T ss_pred EEEEEcc
Confidence 9999986
No 120
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.11 E-value=8.4e-06 Score=65.19 Aligned_cols=73 Identities=16% Similarity=0.270 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|.....+ .+.|.|+.+...++...|-.. ..+|+..... -|.|.+++.+|+|.
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 85 (107)
T 1i8k_A 9 ASLSVATGEKVTIRCMTSTDI---DDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGD 85 (107)
T ss_dssp SEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEEecCCCCEEEEEEECCCC---CCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEE
Confidence 457888999999999986432 357999987532221112100 1234443222 39999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.+
T Consensus 86 Y~C~~~~ 92 (107)
T 1i8k_A 86 YYCLQSF 92 (107)
T ss_dssp EEEEECS
T ss_pred EEEEEee
Confidence 9999986
No 121
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.10 E-value=1.3e-05 Score=66.76 Aligned_cols=86 Identities=16% Similarity=0.307 Sum_probs=56.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e------------ccCcceEeecC-------ceEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F------------RSDKFIRTVDG-------GLVI 338 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~------------~~~~~~~~~~~-------GLlI 338 (378)
...+.+..|+++.|+|.....+....+.|.|+.++... .+. . .-.+|+....+ -|.|
T Consensus 13 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~---~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 89 (139)
T 1pko_A 13 GHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSR---VVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRI 89 (139)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CC---EEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEE
T ss_pred CCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCc---eEEEEeCCcccccccCcccCCceEEccccccCCeEEEEE
Confidence 44678999999999999864432222479999876421 010 0 01234433221 3999
Q ss_pred eeecCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 339 MAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
.+|+.+|+|.|.|.+.+ ..-+...|.|.+
T Consensus 90 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 121 (139)
T 1pko_A 90 QNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 121 (139)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccCCHHHCEEEEEEEEcCCCceEEEEEEEEec
Confidence 99999999999999986 344667788763
No 122
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.09 E-value=3.6e-06 Score=72.45 Aligned_cols=77 Identities=23% Similarity=0.355 Sum_probs=54.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCCe---
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGNT--- 356 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~~--- 356 (378)
.+.+.+|+++.|.|...+.+. +.++|+.++.. +. .+.++.. ....|.|.+++..|+|.|.|.+.|.
T Consensus 109 ~~~~~~g~~~~l~C~~~g~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 178 (192)
T 2iep_A 109 NVKIIEGLKAVLPCTTMGNPK---PSVSWIKGDSA-----LR--ENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGT 178 (192)
T ss_dssp CEEEETTSCEEECCEEEEESC---CEEEEEETTEE-----CC--CCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ceEEeCCCcEEEEEEEeccCC---ceEEEEeCCEE-----cc--CCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCc
Confidence 467888999999999876544 57999988653 32 3334333 3445999999999999999999872
Q ss_pred e-eEEEeeeecc
Q psy10772 357 V-LCTHNLTVDA 367 (378)
Q Consensus 357 ~-l~~~~~~v~~ 367 (378)
. -.+..|.|..
T Consensus 179 ~~s~~~~l~V~~ 190 (192)
T 2iep_A 179 AYSKLVKLEVEV 190 (192)
T ss_dssp EECCCEEEEEEC
T ss_pred EEEEEEEEEEEe
Confidence 2 2235666653
No 123
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.09 E-value=1.4e-05 Score=70.42 Aligned_cols=91 Identities=19% Similarity=0.268 Sum_probs=57.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc-----------CcceEee-cC---ceEEeeecCCC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-----------DKFIRTV-DG---GLVIMAVEELD 345 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~-----------~~~~~~~-~~---GLlI~~v~~~D 345 (378)
.+.+.+|+++.|.|...... +.+.|.|+.+........+.... .+|+... .. -|.|.+|+.+|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQH--STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPED 86 (218)
T ss_dssp EEEEETTSCEEEEEEECGGG--TTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEECCCCcEEEEEECCCCC--CCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCccc
Confidence 67889999999999997652 33589998864221111111001 1233321 22 29999999999
Q ss_pred CeEEEEEeCCee--------eEEEeeeecccccCCC
Q psy10772 346 AGKYDCWLGNTV--------LCTHNLTVDAHSNVAD 373 (378)
Q Consensus 346 sG~Y~C~~~~~~--------l~~~~~~v~~~~c~~~ 373 (378)
+|.|.|.+.+.. -....|+|....-.+|
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P 122 (218)
T 3s96_B 87 EAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTP 122 (218)
T ss_dssp CEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCC
T ss_pred CEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCc
Confidence 999999997643 1234677765443333
No 124
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.09 E-value=5.8e-06 Score=79.37 Aligned_cols=73 Identities=29% Similarity=0.411 Sum_probs=57.1
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---eee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TVL 358 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l 358 (378)
+.+.+|+++.|.|...+.+. |.++|++++.+ |. +.++...++-|.|.+++.+|+|.|.|.+.| ..-
T Consensus 319 ~~~~~g~~~~l~C~~~g~p~---p~v~W~~~g~~-----~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 387 (395)
T 1bih_A 319 IVVKQGQDVTIPCKVTGLPA---PNVVWSHNAKP-----LS---GGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKY 387 (395)
T ss_dssp EEECTTSCEEEECEEEEESC---CCCEEEETTEE-----CC---SSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred eEecCCCeEEEEEEECcccC---CeeEEEECCEE-----CC---CCceEEECCEEEEeeCCcccCEEEEEEEEccCCCce
Confidence 67888999999999875444 58999998754 42 335666677899999999999999999987 555
Q ss_pred EEEeeee
Q psy10772 359 CTHNLTV 365 (378)
Q Consensus 359 ~~~~~~v 365 (378)
++..|.|
T Consensus 388 ~~~~l~V 394 (395)
T 1bih_A 388 FETLVQV 394 (395)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 5555554
No 125
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.08 E-value=4e-06 Score=71.76 Aligned_cols=76 Identities=21% Similarity=0.279 Sum_probs=54.3
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec--CceEEeeecCCCCeEEEEEeCC---
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD--GGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~--~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
...+.+|+++.|.|...+.+. |.++|+.++.. +. .+.++.... .-|.|.+++.+|+|.|.|.+.|
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~---~~v~W~~~g~~-----~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 176 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPE---PAISWFRNGKL-----IE--ENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAG 176 (189)
T ss_dssp EEETTSCCCEEEECEEEEESC---CEEEEEETTEE-----CC--CSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred cccccCCCcEEEEEEEccCCC---CeEEEEECCEE-----Cc--CCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCC
Confidence 455677999999999975543 58999988754 32 333333322 3399999999999999999987
Q ss_pred eeeEEEeeeec
Q psy10772 356 TVLCTHNLTVD 366 (378)
Q Consensus 356 ~~l~~~~~~v~ 366 (378)
..-++..|.|.
T Consensus 177 ~~~~~~~l~V~ 187 (189)
T 2v5t_A 177 EDEKQAFLQVF 187 (189)
T ss_dssp EEEEEEEEEEE
T ss_pred ceeEEEEEEEE
Confidence 45556666654
No 126
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.08 E-value=5.7e-06 Score=70.81 Aligned_cols=68 Identities=21% Similarity=0.354 Sum_probs=47.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. +.+.|+.++.. +....+.++.. .+..|.|.+++..|+|.|.|.+.+
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 10 SPQEFKQGEDAEVVCRVSSSPA---PAVSWLYHNEE-----VTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp SSEEEETTSCEEECCEEECSSC---CEEEEEC----------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCcEEEEEEEcCCCC---CEEEEEECCcc-----ceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEE
Confidence 4567889999999999865433 57999988754 32212334333 344599999999999999999764
No 127
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.08 E-value=2.1e-05 Score=62.98 Aligned_cols=87 Identities=17% Similarity=0.187 Sum_probs=55.3
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC--ceee--------EeeccCcceEeec------CceEEeee
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK--GRYQ--------IKFRSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~--~~~~--------l~~~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+.+|+++.|+|....... ...+.|+.+.... .... +.....+|+.... -.|.|.+|
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 80 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRG--ITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENS 80 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTC--CCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSC
T ss_pred CcceEEEEeCCcEEEEEEeeCCCC--CcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCC
Confidence 346788999999999999754222 2369999875221 0000 1011233444321 24999999
Q ss_pred cCCCCeEEEEEeCCe-----eeEEEeeeec
Q psy10772 342 EELDAGKYDCWLGNT-----VLCTHNLTVD 366 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~-----~l~~~~~~v~ 366 (378)
+.+|+|.|.|...+. .-....|.|.
T Consensus 81 ~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~ 110 (116)
T 2or8_A 81 VESDSGLYCCRVEIPGWFNDQKVTFSLQVK 110 (116)
T ss_dssp CGGGCEEEEEEECCSSTTCCEEEEEEEEEE
T ss_pred CcccCEEEEEEEEcCCcccccEEEEEEEEC
Confidence 999999999999862 2455566553
No 128
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.07 E-value=6.9e-06 Score=68.21 Aligned_cols=90 Identities=14% Similarity=0.205 Sum_probs=54.6
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC-------ceeeEe---eccCcceEeec-------CceEEee
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK-------GRYQIK---FRSDKFIRTVD-------GGLVIMA 340 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~-------~~~~l~---~~~~~~~~~~~-------~GLlI~~ 340 (378)
....+.+..|+++.|+|....+.......|.|+.++... ++.... .+-..|+.... --|.|.+
T Consensus 11 ~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~ 90 (125)
T 4gos_A 11 TTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKN 90 (125)
T ss_dssp EEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESS
T ss_pred cCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECC
Confidence 345677888999999998753333322358998754321 000000 00112322221 2499999
Q ss_pred ecCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 341 VEELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|+.+|+|.|.|...+ ..-+..+|.|.-
T Consensus 91 v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG~ 120 (125)
T 4gos_A 91 VQLTDAGTYKCYIITSKGKGNANLEYKTGH 120 (125)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CChHHCEEEEEEEEeCCCeEEEEEEEEECC
Confidence 999999999999876 445666666654
No 129
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.07 E-value=1.4e-05 Score=65.72 Aligned_cols=74 Identities=18% Similarity=0.311 Sum_probs=50.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec----CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD----GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~----~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+....+...|-.. ..+|+.... --|.|.+|+.+|+|
T Consensus 10 p~~v~v~~G~~vtL~C~~~~~~---~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 86 (119)
T 2e27_L 10 PSSLSASLGGKVTITCKANQDI---KKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAA 86 (119)
T ss_dssp CSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCeEEEeCCCCEEEEEEeCCCC---CceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCE
Confidence 3567899999999999986443 257999987532221112100 123444321 13999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 87 ~Y~C~~~~ 94 (119)
T 2e27_L 87 TYYCLQYD 94 (119)
T ss_dssp EEEEEECG
T ss_pred EEEEEEcc
Confidence 99999986
No 130
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.07 E-value=7.4e-06 Score=70.54 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=55.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc-CcceEeecCc---eEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGG---LVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~-~~~~~~~~~G---LlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.. +.... ....+...+| |.|.+++..|+|.|.|.+.
T Consensus 12 ~~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 12 LQSVVVLEGSTATFEAHISGFPV---PEVSWFRDGQV-----ISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp CCCEEEETTSCEEEEEEEEEESC---CEEEEEESSSB-----CCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCceEEECCCEEEEEEEEEecCC---CEEEEEECCEE-----cccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 35678899999999999865433 57999998764 32111 1112222333 9999999999999999997
Q ss_pred C---eeeEEEeeeec
Q psy10772 355 N---TVLCTHNLTVD 366 (378)
Q Consensus 355 ~---~~l~~~~~~v~ 366 (378)
+ ....+..|.|.
T Consensus 84 n~~~~~~~~~~l~v~ 98 (194)
T 2a38_A 84 NGSGQATSTAELLVK 98 (194)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCceEeEEEEEEEc
Confidence 5 44555666665
No 131
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.07 E-value=1.3e-05 Score=65.90 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=50.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec----CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD----GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~----~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+....+...|-.. ..+|+.... --|.|.+|+.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 84 (120)
T 1mqk_L 8 PVSLSASVGETVTITCRASENI---YSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFG 84 (120)
T ss_dssp CSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEEEcCCCcEEEEEEeCCCC---CceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCE
Confidence 3567889999999999986443 357999987532221111100 123444321 13999999999999
Q ss_pred EEEEEeCCe
Q psy10772 348 KYDCWLGNT 356 (378)
Q Consensus 348 ~Y~C~~~~~ 356 (378)
.|.|.+.+.
T Consensus 85 ~Y~C~~~~~ 93 (120)
T 1mqk_L 85 SYYCQHHYG 93 (120)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEEeC
Confidence 999999874
No 132
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.07 E-value=6.7e-06 Score=70.71 Aligned_cols=80 Identities=25% Similarity=0.282 Sum_probs=56.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc--eEEeeecCCCCeEEEEEeCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG--LVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G--LlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.. +. ..+.++....+| |.|.+++..|+|.|.|.+.+.
T Consensus 14 ~~~~~~~~G~~v~l~C~~~~~p~---~~i~W~~~~~~-----~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 14 LETVDALVEEVATFMCAVESYPQ---PEISWTRNKIL-----IK-LFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp CCEEEEETTSCEEEECCEEEESC---CEEEEEETTEE-----CC-TTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECS
T ss_pred ccceeeeCCCcEEEEeeCCCCCC---CeEEEEECCEE-----cc-ccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcC
Confidence 45678899999999999865433 57999987653 32 123344444445 889999999999999999862
Q ss_pred ----eeEEEeeeecc
Q psy10772 357 ----VLCTHNLTVDA 367 (378)
Q Consensus 357 ----~l~~~~~~v~~ 367 (378)
.-....|.|..
T Consensus 85 ~~~~~~~~~~l~v~~ 99 (192)
T 2iep_A 85 VGGAVESCGALQVKM 99 (192)
T ss_dssp SSCCEEEEEEEEEEE
T ss_pred CCceeEeEEEEEEEe
Confidence 23344555543
No 133
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.07 E-value=8.4e-06 Score=73.12 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=61.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-----------------------eccCcceEeec--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-----------------------FRSDKFIRTVD-- 333 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-----------------------~~~~~~~~~~~-- 333 (378)
.+.+.+.+|+++.|.|...++...+.+.|+|++++....+..+. .....|+....
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (250)
T 2fbo_J 9 HTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88 (250)
T ss_dssp CSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTT
T ss_pred CCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCC
Confidence 45788999999999999876444445689999987442110010 01123433332
Q ss_pred -CceEEeeecCCCCeEEEEEeCCee--------eEEEeeeeccc
Q psy10772 334 -GGLVIMAVEELDAGKYDCWLGNTV--------LCTHNLTVDAH 368 (378)
Q Consensus 334 -~GLlI~~v~~~DsG~Y~C~~~~~~--------l~~~~~~v~~~ 368 (378)
..|.|.+|+.+|+|.|.|.+.+.. -.+..|.|...
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 369999999999999999998822 34778888764
No 134
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.06 E-value=5.7e-06 Score=76.62 Aligned_cols=75 Identities=25% Similarity=0.303 Sum_probs=54.9
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEeec--CceEEeeecCCCCeEEEEEeCC---
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRTVD--GGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~--~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+|+++.|.|...+.+. | .++|++++.+ |. .+.++...+ .-|.|.+++.+|+|.|.|.+.|
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~---~~~v~W~~~g~~-----~~--~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G 300 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKK---ETHIVWYKDERE-----IS--VDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRG 300 (312)
T ss_dssp EEEETTTEEEEEEEEESCCS---SCEEEEEETTEE-----EE--EECCC----CEEEEEECSCSGGGCEEEEEEEESTTC
T ss_pred EEEeCCCEEEEEEEEcCCCC---CCEEEEeeCCEE-----CC--CCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCC
Confidence 67889999999999976443 4 7999998754 43 233333322 2499999999999999999987
Q ss_pred eeeEEEeeeec
Q psy10772 356 TVLCTHNLTVD 366 (378)
Q Consensus 356 ~~l~~~~~~v~ 366 (378)
..-++..|+|+
T Consensus 301 ~~~~~~~l~i~ 311 (312)
T 2y23_A 301 KDKSRLKLVDE 311 (312)
T ss_dssp CEEEEEEECSC
T ss_pred ceeeeeEEEec
Confidence 66677777664
No 135
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.06 E-value=9.6e-06 Score=76.89 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=63.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCC--------CCCCCCeEEEEecccCceeeEeec---cCcceEeecCceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA--------SMANQPMSWYHYSKDKGRYQIKFR---SDKFIRTVDGGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~--------~La~~~v~W~~~~~~~~~~~l~~~---~~~~~~~~~~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .-+.+.|+|+.++..... ..... .+.++...+..|.|.+++.+|+|
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 92 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDL-EEPINFRLPENRISKEKDVLWFRPTLLNDTG 92 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCC-EEECCCCCGGGCEEEETTEEEESSCCGGGCE
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcc-cccccccccCceEeecCCEEEEccCChhhCE
Confidence 5678899999999999986432 122358999998743111 11111 34456666777999999999999
Q ss_pred EEEEEeCC---eeeEEEeeeeccc
Q psy10772 348 KYDCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 348 ~Y~C~~~~---~~l~~~~~~v~~~ 368 (378)
.|.|.+.| ..-++..|+|...
T Consensus 93 ~Y~C~a~n~~~~~~~~~~l~V~~~ 116 (349)
T 4dep_C 93 NYTCMLRNTTYCSKVAFPLEVVQK 116 (349)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECC
T ss_pred EEEEEEecCCceEEEEEEEEEecC
Confidence 99999987 4455677877653
No 136
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.05 E-value=9.3e-06 Score=76.06 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=56.9
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
..+..|+++.|.|...+.+. | .|+|++++.+ |. + .....+.-|.|.+++.+|+|.|.|.+.| ..
T Consensus 227 ~~~~~g~~v~l~C~~~g~P~---p~~v~W~~~~~~-----l~---~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 294 (313)
T 4fqp_A 227 NWYLGQNEATLTCDARSNPE---PTGYNWSTTMGP-----LP---P-FAVAQGAQLLIRPVDKPINTTLICNVTNALGAR 294 (313)
T ss_dssp CEETTCCCEEEEEEEEEESC---CCEEEEEETTBS-----CC---T-TEEEETTEEEECCCSSCCEEEEEEEEECSSCEE
T ss_pred eeecCCCeEEEEEEecCCCC---CcEEEEEECCEE-----CC---C-ceEEeCCEEEECcCChhhCEEEEEEEEeCCCcE
Confidence 34566899999999976544 4 5899998765 42 1 2234456699999999999999999987 66
Q ss_pred eEEEeeeeccc
Q psy10772 358 LCTHNLTVDAH 368 (378)
Q Consensus 358 l~~~~~~v~~~ 368 (378)
-++..|.|.+.
T Consensus 295 ~~~~~l~V~~~ 305 (313)
T 4fqp_A 295 QAELTVQVKEG 305 (313)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEEeC
Confidence 77888888763
No 137
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.05 E-value=9.5e-06 Score=71.71 Aligned_cols=81 Identities=20% Similarity=0.288 Sum_probs=56.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc-ceEeec--C--ceEEeee-cCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK-FIRTVD--G--GLVIMAV-EELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~-~~~~~~--~--GLlI~~v-~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+. +.++|+.++.. +. .+. ...... . -|.|.++ +..|+|.|.|.
T Consensus 13 p~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~~~~-----~~--~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 13 PVDQTGVSGGVASFICQATGDPR---PKIVWNKKGKK-----VS--NQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp CCCEEEETTSCEEEEEEEEEESC---CEEEEEETTEE-----CC--CTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred cceeEEecCCeEEEEEEEeeCCC---CEEEEEECCcC-----CC--CCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 34578899999999999875443 58999998754 32 222 122222 2 2999999 59999999999
Q ss_pred eCC---eeeEEEeeeecccc
Q psy10772 353 LGN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~~~ 369 (378)
+.+ ..-.+..|+|....
T Consensus 83 a~n~~g~~~~~~~l~V~~~~ 102 (212)
T 2yd6_A 83 ASNNVGEISVSTRLTVLRED 102 (212)
T ss_dssp EEETTEEEEEEEEEEEECGG
T ss_pred EEcCCCcEEEEEEEEEeccC
Confidence 987 44566777776543
No 138
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.05 E-value=9.1e-06 Score=79.03 Aligned_cols=88 Identities=18% Similarity=0.285 Sum_probs=62.7
Q ss_pred CcccccccceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-ccCcceEeecCceEEeeecCCCCeEE
Q psy10772 271 SICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-RSDKFIRTVDGGLVIMAVEELDAGKY 349 (378)
Q Consensus 271 ~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~~~~~~~~~~~GLlI~~v~~~DsG~Y 349 (378)
..|.. .....+.+.+|+++.|.|.+.+| .|.|+|+.++.+. +.. ..+.++...+.-|.|.+|+.+|+|.|
T Consensus 246 ~~C~~-~~~~~v~v~~G~~~~l~C~~~gp----~p~i~W~~~~~~~----~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y 316 (361)
T 2xot_A 246 FNCSE-YKESAWEAHLGDTLTIRCDTKQQ----GMTKVWVSPSNEQ----VLSQGSNGSVSVRNGDLFFKKVQVEDGGVY 316 (361)
T ss_dssp TTCCS-CCCCCCEEETTCCEEECCCCSST----TCEEEEECTTSCB----CCSCCSSSSEEEETTEEEESSCCTTSCEEE
T ss_pred ccCCC-ccccCceecCCCeEEEEeEeeCC----CCeEEEEeCCCee----EeecccCCceEeecCeEEEeecCcccCEEE
Confidence 45653 34556789999999999998763 3589999865431 110 12224445455599999999999999
Q ss_pred EEEeCC---eeeEEEeeeecc
Q psy10772 350 DCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v~~ 367 (378)
.|.+.| ..-++..|+|..
T Consensus 317 ~C~a~N~~g~~~~~~~l~V~~ 337 (361)
T 2xot_A 317 TCYAMGETFNETLSVELKVYN 337 (361)
T ss_dssp EEEEECSSCEEEEEEEEEEES
T ss_pred EEEEecCCCccEEEEEEEEEe
Confidence 999998 566677777754
No 139
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.04 E-value=5.6e-06 Score=72.21 Aligned_cols=83 Identities=24% Similarity=0.314 Sum_probs=58.3
Q ss_pred eeEEEEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+..|+++.|.|.. .+.+. |.++|+.++.. |. ..+.++...+..|.|.+++.+|+|.|.|.+.|
T Consensus 119 ~~~~~~~g~~~~l~C~~~~~~p~---~~v~W~~~~~~-----l~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 189 (212)
T 2v9r_A 119 SDVMVAVGEPAVMECQPPRGHPE---PTISWKKDGSP-----LD-DKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVG 189 (212)
T ss_dssp CCEEEETTSCEEEECBCCCEESC---CEEEEEETTEE-----EC-TTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CceEecCCCcEEEEEecCCCCCC---CEEEEEECCcc-----CC-CCcceEEccCCeEEEeeCCHhhCeeEEEEEecccC
Confidence 35678899999999987 44433 58999987653 43 12445566677799999999999999999987
Q ss_pred eeeE-EEeeeecccccC
Q psy10772 356 TVLC-THNLTVDAHSNV 371 (378)
Q Consensus 356 ~~l~-~~~~~v~~~~c~ 371 (378)
.... ...|+|...+-.
T Consensus 190 ~~~s~~~~l~V~~~P~~ 206 (212)
T 2v9r_A 190 ERESEVAELTVLERPSF 206 (212)
T ss_dssp EEECCCEEEEEEC----
T ss_pred ceecceEEEEEEeCchH
Confidence 2222 367777765433
No 140
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.04 E-value=1.7e-05 Score=68.33 Aligned_cols=81 Identities=19% Similarity=0.225 Sum_probs=53.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEee----cCc---eEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTV----DGG---LVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~----~~G---LlI~~v~ 342 (378)
+.+.+.+|+++.|.|.....+ .+.++|+.++... .+.. +-..|+... .+| |.|.+++
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~---~~~i~W~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~ 76 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKK---SIQFHWKNSNQIK---ILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLK 76 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSS---CCCEEEEETTCCE---EEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCC
T ss_pred CcEEEeCCCCEEEEEEEcCCC---ceEEEEEeCCccc---eEEecCceEecCChhhCCccccccccccCCeEEEEEecCC
Confidence 467899999999999976333 3589999876420 0100 001222221 223 9999999
Q ss_pred CCCCeEEEEEeCCeeeEEEeeeecc
Q psy10772 343 ELDAGKYDCWLGNTVLCTHNLTVDA 367 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~~l~~~~~~v~~ 367 (378)
.+|+|.|.|.+.+.. ....|.|..
T Consensus 77 ~~D~G~Y~C~~~~~~-~~~~l~V~~ 100 (184)
T 2ny1_B 77 IEDSDTYICEVEDQK-EEVQLLVFG 100 (184)
T ss_dssp GGGCEEEEEEETTEE-EEEEEEEEE
T ss_pred HHHCEEEEEEEEcCC-CcEEEEEEE
Confidence 999999999999853 355666653
No 141
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.04 E-value=1.3e-05 Score=70.75 Aligned_cols=82 Identities=22% Similarity=0.324 Sum_probs=59.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--ecCc---eEEeeecC-CCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--VDGG---LVIMAVEE-LDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~~~G---LlI~~v~~-~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+. +.|+|+.++.. |. ..+.++.. ..+| |.|.+++. .|+|.|.|.
T Consensus 13 p~~~~v~~G~~v~l~C~~~g~p~---~~v~W~~~~~~-----~~-~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 13 PQNQGVRVGGVASFYCAARGDPP---PSIVWRKNGKK-----VS-GTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp CCCEEEETTSCEEEEEEEECSSC---CEEEEEETTEE-----CC-TTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCceEEecCCEEEEEEEEccCCC---CeEEEEECCEE-----CC-CCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 45578899999999999875433 58999998754 32 12223222 2344 89999999 999999999
Q ss_pred eCCe----eeEEEeeeecccc
Q psy10772 353 LGNT----VLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~~----~l~~~~~~v~~~~ 369 (378)
+.+. .-.+..|+|....
T Consensus 84 ~~n~~g~~~~~~~~l~V~~~~ 104 (212)
T 2yd1_A 84 AENGVGDAVSADATLTIYEGD 104 (212)
T ss_dssp EECSSSCEEEEEEEEEEECTT
T ss_pred EEeCCCCeEEeeEEEEEeccc
Confidence 9872 5677888887653
No 142
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.03 E-value=1.3e-05 Score=63.70 Aligned_cols=87 Identities=20% Similarity=0.347 Sum_probs=53.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCC--CCeEEEEecccCcee------eEeeccCcceEee---------cCceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMAN--QPMSWYHYSKDKGRY------QIKFRSDKFIRTV---------DGGLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~--~~v~W~~~~~~~~~~------~l~~~~~~~~~~~---------~~GLlI~~v~~ 343 (378)
.+.+.+|+++.|+|....+..-+. ..|.|+.++...... ........|+... ..-|.|.+|+.
T Consensus 9 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~ 88 (118)
T 3udw_C 9 QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV 88 (118)
T ss_dssp EEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSCCG
T ss_pred eEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeecCh
Confidence 378899999999999853321110 138999874321000 0001112233222 23599999999
Q ss_pred CCCeEEEEEeCC----eeeEEEeeeecc
Q psy10772 344 LDAGKYDCWLGN----TVLCTHNLTVDA 367 (378)
Q Consensus 344 ~DsG~Y~C~~~~----~~l~~~~~~v~~ 367 (378)
+|+|.|.|...+ ..-....|.|.+
T Consensus 89 ~D~G~Y~C~v~~~~~~~~~~~~~L~V~~ 116 (118)
T 3udw_C 89 EDEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (118)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred HHCeEEEEEEEECCCCCccceEEEEEEe
Confidence 999999999876 444556666654
No 143
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.03 E-value=2.6e-05 Score=73.28 Aligned_cols=129 Identities=19% Similarity=0.235 Sum_probs=74.9
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..+...| .+.|++.. -...|....- ...+.... ..+.... ......+.+.+|+++.|.|...+.+.
T Consensus 181 ~L~i~~v~~~d---~G~Y~C~a-~n~~g~~~~~~~l~V~~~~--~~~p~~~-~~~~~~~~~~~G~~v~l~C~~~g~p~-- 251 (334)
T 1ry7_B 181 SLVMESVVPSD---RGNYTCVV-ENKFGSIRQTYTLDVLERS--PHRPILQ-AGLPANQTAVLGSDVEFHCKVYSDAQ-- 251 (334)
T ss_dssp EEEECSCCGGG---CCCEEEEE-EETTEEEEEEEEEEEECCC--CSSCBCC-TTCSCCEEEESSCCEEECCCCBCSSC--
T ss_pred EEEECCCCccc---CEEEEEEE-EeCCCCEEEEEEEEEecCC--CCCCceE-ecCCCceEEeCCCCEEEEEEEecCCC--
Confidence 45565555554 57899883 3445554321 11111100 0001111 00124567889999999999865443
Q ss_pred CCCeEEEE----ecccCceeeEeeccCcceEeec-----------CceEEeeecCCCCeEEEEEeCC---eeeEEEeeee
Q psy10772 304 NQPMSWYH----YSKDKGRYQIKFRSDKFIRTVD-----------GGLVIMAVEELDAGKYDCWLGN---TVLCTHNLTV 365 (378)
Q Consensus 304 ~~~v~W~~----~~~~~~~~~l~~~~~~~~~~~~-----------~GLlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v 365 (378)
|.++|++ ++.. +......++.... .-|.|.+++..|+|.|.|.+.| ..-++..|.|
T Consensus 252 -p~v~W~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 325 (334)
T 1ry7_B 252 -PHIQWLKHVEVNGSK-----VGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVV 325 (334)
T ss_dssp -EEEEEEECCCGGGCS-----BCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEE
T ss_pred -CeEEEEECCcCCCcc-----ccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEE
Confidence 5899998 4443 3211111111111 1399999999999999999987 5667777877
Q ss_pred ccc
Q psy10772 366 DAH 368 (378)
Q Consensus 366 ~~~ 368 (378)
...
T Consensus 326 ~~~ 328 (334)
T 1ry7_B 326 LPA 328 (334)
T ss_dssp ECS
T ss_pred EEC
Confidence 653
No 144
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.03 E-value=1.1e-05 Score=70.48 Aligned_cols=84 Identities=20% Similarity=0.174 Sum_probs=55.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC--CCCCCeEEEEecccCceeeEeeccCcceEee-------cCceEEeeecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS--MANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-------DGGLVIMAVEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~--La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-------~~GLlI~~v~~~DsG~Y 349 (378)
...+.+.+|+++.|.|...+.+. ...+.|+|+..+... +. ..+++... ...|.|.+|+.+|+|.|
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~----~~--~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDT----SL--QSERATLLEEQLPLGKALFHIPSVQVRDSGQY 82 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--C----CC--BCSSCEECGGGGGGTEEEEEECSCCGGGCEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcc----cc--cCCceEEeeccccCCeeEEEECCCCHHHCcEE
Confidence 45678999999999999865542 222479999833210 11 12222222 13599999999999999
Q ss_pred EEEeCC---eeeEEEeeeeccc
Q psy10772 350 DCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v~~~ 368 (378)
.|.+.+ ..-....|.|...
T Consensus 83 ~C~~~~~~~~~~~~~~l~V~~~ 104 (202)
T 3bp6_B 83 RCLVICGAAWDYKYLTVKVKAS 104 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBC
T ss_pred EEEEEeCCCcceEEEEEEecCC
Confidence 999987 3456677777653
No 145
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.03 E-value=1.1e-05 Score=72.15 Aligned_cols=82 Identities=21% Similarity=0.312 Sum_probs=57.4
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc--Cc-ceEeecCceEEeeecCCCCeEEEEEeC
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS--DK-FIRTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~--~~-~~~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+.+.+|+++.|.|...+.+. +.++|+.++.+ +.... .. .......-|.|.+++..|+|.|.|.+.
T Consensus 21 ~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 92 (241)
T 3grw_A 21 DKKLLAVPAANTVRFRCPAAGNPT---PSISWLKNGRE-----FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVE 92 (241)
T ss_dssp SCCEEEEETTSEEEEECCEECSSC---CEEEEEETTEE-----CCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEE
T ss_pred CCcceEEcCCCeEEEEEEecCCCC---ceeEEEECCcc-----cCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEe
Confidence 345788999999999999865433 58999988754 32101 01 112223459999999999999999997
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
+ ..-.+..|.|..
T Consensus 93 ~~~~~~~~~~~l~V~~ 108 (241)
T 3grw_A 93 NKFGSIRQTYTLDVLE 108 (241)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ecCCceEEEEEEEEec
Confidence 6 445666777755
No 146
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.02 E-value=2.2e-05 Score=70.11 Aligned_cols=84 Identities=23% Similarity=0.286 Sum_probs=54.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE----ecccCceeeEeeccCcceE-----------eecCceEEeeecCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYH----YSKDKGRYQIKFRSDKFIR-----------TVDGGLVIMAVEEL 344 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~----~~~~~~~~~l~~~~~~~~~-----------~~~~GLlI~~v~~~ 344 (378)
....+.+|+++.|.|...+.+. |.+.|+. ++.. +.. .+.... ....-|.|.+++.+
T Consensus 122 ~~~~~~~g~~v~L~C~~~~~p~---p~v~W~~~~~~~g~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 192 (241)
T 3grw_A 122 ANQTAVLGSDVEFHCKVYSDAQ---PHIQWLKHVEVNGSK-----VGP-DGTPYVTVLKSWISESVEADVRLRLANVSER 192 (241)
T ss_dssp CSEECCTTCCEEEEEEEECSSC---CEEEEEEECCSSSCS-----SCT-TTCCCEEEEEEEECSBSEEEEEEEECSCCGG
T ss_pred ccceecCCCEEEEEEEEecCCC---CEEEEEEcccCCCcc-----cCC-CCceeeeeeeEeeeeecCCceEEEECcCCcc
Confidence 4556788999999999976544 5899998 4432 210 111111 12234999999999
Q ss_pred CCeEEEEEeCC---eeeEEEeeeecccccCC
Q psy10772 345 DAGKYDCWLGN---TVLCTHNLTVDAHSNVA 372 (378)
Q Consensus 345 DsG~Y~C~~~~---~~l~~~~~~v~~~~c~~ 372 (378)
|+|.|.|.+.| ..-.+..|.|...+-.+
T Consensus 193 d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 193 DGGEYLCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEC-------
T ss_pred cCcEEEEEEecCcceEEEEEEEEecCCCCCC
Confidence 99999999987 66778888887655443
No 147
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.02 E-value=5.8e-06 Score=75.94 Aligned_cols=80 Identities=29% Similarity=0.319 Sum_probs=56.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc--CcceEeecCc--eEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS--DKFIRTVDGG--LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~--~~~~~~~~~G--LlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.++|++++.+ |.... ..++.....+ |.|.+++.+|+|.|.|.+.|
T Consensus 204 ~~~~~~~g~~v~l~C~~~g~p~---p~i~W~~~g~~-----~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 275 (291)
T 1qz1_A 204 VNATANLGQSVTLVCDADGFPE---PTMSWTKDGEP-----IENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAEN 275 (291)
T ss_dssp EEEETTSCCCEEEEEEEEEESC---CEEEEEETTEE-----CCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEE
T ss_pred cccccccCceEEEEEEEEEeCC---CcEEEEECCEE-----CcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEe
Confidence 3456778999999999876544 58999998754 32111 1234433333 99999999999999999987
Q ss_pred ---eeeEEEeeeecc
Q psy10772 356 ---TVLCTHNLTVDA 367 (378)
Q Consensus 356 ---~~l~~~~~~v~~ 367 (378)
..-++..|.|.+
T Consensus 276 ~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 276 KAGEQDASIHLKVFA 290 (291)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceEEEEEEEEEc
Confidence 556677777653
No 148
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.01 E-value=3.3e-05 Score=62.40 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=57.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCC-CCCCCCeEEEEecccCceee-E-ee-----------ccCcceEee------cCceEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA-SMANQPMSWYHYSKDKGRYQ-I-KF-----------RSDKFIRTV------DGGLVI 338 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~-~La~~~v~W~~~~~~~~~~~-l-~~-----------~~~~~~~~~------~~GLlI 338 (378)
.+.+.+.+|+++.|+|....+. ....+.|.|+++........ + .. ...+|+... +..|.|
T Consensus 6 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (124)
T 1neu_A 6 DREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVI 85 (124)
T ss_dssp CSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEEE
T ss_pred CCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEEE
Confidence 3467899999999999976431 11234799998864211000 1 00 012344432 235999
Q ss_pred eeecCCCCeEEEEEeCCe-----eeEEEeeeecc
Q psy10772 339 MAVEELDAGKYDCWLGNT-----VLCTHNLTVDA 367 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~~-----~l~~~~~~v~~ 367 (378)
.+|+.+|+|.|.|...+. .-....|.|.+
T Consensus 86 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~ 119 (124)
T 1neu_A 86 HNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFE 119 (124)
T ss_dssp CSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC
T ss_pred ccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEec
Confidence 999999999999998873 24567777765
No 149
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.01 E-value=1.7e-05 Score=69.74 Aligned_cols=88 Identities=16% Similarity=0.187 Sum_probs=55.8
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee--------eEeecc---CcceEeecC-ceEEeeecCCC
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY--------QIKFRS---DKFIRTVDG-GLVIMAVEELD 345 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~--------~l~~~~---~~~~~~~~~-GLlI~~v~~~D 345 (378)
..+.+.+.+|+++.|+|....... .+.|.|++++..-..+ .+.... .+|+....+ .|.|.+|+.+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D 81 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEK--VNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMED 81 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSC--CCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGG
T ss_pred CCeEEEEEecCeEEEeccCCCccc--ccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCccc
Confidence 346788999999999998753222 2479999875320000 000000 124333333 49999999999
Q ss_pred CeEEEEEeCC---eeeEEEeeeecc
Q psy10772 346 AGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 346 sG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
+|.|.|.+.+ .....+.|.|.+
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~ 106 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILR 106 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEEEEc
Confidence 9999999987 233466677654
No 150
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.01 E-value=7e-06 Score=82.18 Aligned_cols=80 Identities=21% Similarity=0.302 Sum_probs=56.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-ccCcceEee-cCceEEeeecCCCCeEEEEEeCC-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-RSDKFIRTV-DGGLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
.+.+.+.+|+++.|.|.+.+.+. |.|+|+.++.+ +.. ....++... ++.|.|.+|+.+|+|.|.|.+.|
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~---p~i~W~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 463 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPP---PAILWLSPRKH-----LVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANA 463 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESC---CEEEEECTTSC-----BC-------CEECTTSCEEESSCCSTTCEEEEEEEEET
T ss_pred cccEEEeCCCeEEEEEeccccCC---CEEEEEECCcc-----ccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeC
Confidence 36678999999999999876544 68999988754 211 122334433 44599999999999999999987
Q ss_pred --eeeEEEeeeec
Q psy10772 356 --TVLCTHNLTVD 366 (378)
Q Consensus 356 --~~l~~~~~~v~ 366 (378)
..-+...|.|.
T Consensus 464 ~g~~~~~~~l~V~ 476 (477)
T 2id5_A 464 GGNDSMPAHLHVR 476 (477)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEEEEEe
Confidence 44555666664
No 151
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.01 E-value=1.5e-05 Score=76.39 Aligned_cols=83 Identities=19% Similarity=0.200 Sum_probs=58.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEe--cccCceeeEee---ccCcceEeec----CceEEeeecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHY--SKDKGRYQIKF---RSDKFIRTVD----GGLVIMAVEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~--~~~~~~~~l~~---~~~~~~~~~~----~GLlI~~v~~~DsG~Y 349 (378)
.+...+.+|+++.|.|...+.+. |.|+|+.+ +.. |.. ..+.++.... .-|.|.+++.+|+|.|
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~---p~v~W~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 78 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPI---PEITWKRAVDGFT-----FTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 78 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSC---CEEEEEETTTTEE-----ECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred cCceEEeCCCeEEEEEEeecccC---CeEEEEeCCCCce-----eccCcCCCCCeEEEeccCCcceEEEcccChhhCEEE
Confidence 34567889999999999876544 68999988 432 321 0134444432 3499999999999999
Q ss_pred EEEeCC---eeeEEEeeeecccc
Q psy10772 350 DCWLGN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v~~~~ 369 (378)
.|.+.| ..-.+..|+|...+
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~~P 101 (389)
T 2jll_A 79 DCEAASRIGGHQKSMYLDIEYAP 101 (389)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEE
T ss_pred EEEEEeCCCCcceEEEEEEEeCC
Confidence 999977 45566777776443
No 152
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.00 E-value=1.2e-05 Score=64.82 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=49.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee------cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV------DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~------~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...... .+.+.|.|+.+........+ +..+.|+... .--|.|.+++.+|+|.|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (111)
T 2ywz_A 7 PRTITKETGESLTIKCVLKDHS-CGLSSTTWYRTQLGSTNEKT-ISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQ 84 (111)
T ss_dssp CSEEEECTTCCEEEEEEEESCS-SCCCEEEEEEEETTCCCCEE-CCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcEEEccCCCEEEEeEECCCC-CCCCEEEEEEeCCCCCceEe-eEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEEEE
Confidence 3457889999999999986432 13357999987532211111 1123344321 12399999999999999999
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
+.+
T Consensus 85 ~~~ 87 (111)
T 2ywz_A 85 ADY 87 (111)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 153
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.00 E-value=1.3e-05 Score=64.45 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCC-CCCCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCCCCe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPAS-MANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~-La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
+.+.+.+|+++.|.|.....+. ...+.|.|+.+....+...|-.. ..+|+..... -|.|.+++.+|+|
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 88 (111)
T 1j05_L 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (111)
T ss_dssp SEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCE
Confidence 4577889999999999864430 01247999987532222112110 1235443322 3999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 89 ~Y~C~~~~ 96 (111)
T 1j05_L 89 TYYCQQTN 96 (111)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 99999986
No 154
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.00 E-value=5.8e-06 Score=72.28 Aligned_cols=74 Identities=23% Similarity=0.250 Sum_probs=49.4
Q ss_pred EEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec-Cc---eEEeeecCCCCeEEEEEeCC---e
Q psy10772 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD-GG---LVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~-~G---LlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
.-.++.+.|.|...+.+ +.+.++|++++.+ |. .++++.... .+ |.|.+++.+|+|.|.|.+.+ .
T Consensus 14 ~c~~~~~~l~C~~~~~~--p~~~i~W~~~g~~-----i~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~ 84 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYV--EDLKVNWSHNGSA-----IR--YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTG 84 (212)
T ss_dssp EECSSEEEEEEEBSSCC--SSCEEEEEETTEE-----CC--CCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCE
T ss_pred EEcCceEEEEEEEeccC--CCceEEEEECCEE-----cc--CCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcc
Confidence 34577888888886532 1358999998754 43 334433322 22 99999999999999999887 3
Q ss_pred eeEEEeeeec
Q psy10772 357 VLCTHNLTVD 366 (378)
Q Consensus 357 ~l~~~~~~v~ 366 (378)
......|.|.
T Consensus 85 ~~~~~~l~v~ 94 (212)
T 2r15_A 85 HQKTVDLSGQ 94 (212)
T ss_dssp EEEEEEECHH
T ss_pred eEEEEEEEEe
Confidence 3345555443
No 155
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=97.99 E-value=1.7e-05 Score=79.00 Aligned_cols=85 Identities=13% Similarity=0.117 Sum_probs=58.5
Q ss_pred eEEEEeCCeeeeeeeecc-CCCCCCCCeEEEEecccCc---eeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 281 KQTVTWGQSVHLSCFVKL-PASMANQPMSWYHYSKDKG---RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~-~~~La~~~v~W~~~~~~~~---~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+.+.+|+++.|.|...+ ++. |.|+|++++.... .++.....+.+......-|.|.+|+.+|+|.|.|.+.|.
T Consensus 236 ~~~v~~G~~v~L~C~~~g~~p~---p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 236 QLFLKVGEPLWIRCKAVHVNHG---FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp EEEEETTSCEEEEEEEEESSSC---CCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred ceEEeCCCeEEEEEEEEcCCCC---cEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 567889999999999976 332 5899999876411 000000011222222334999999999999999999998
Q ss_pred eeEEEeeeeccc
Q psy10772 357 VLCTHNLTVDAH 368 (378)
Q Consensus 357 ~l~~~~~~v~~~ 368 (378)
.-++..|+|...
T Consensus 313 ~~~~~~L~V~~~ 324 (423)
T 3qs7_E 313 PSQSALVTIVEK 324 (423)
T ss_dssp EEEEEEEEEESS
T ss_pred CCceEEEEEEeC
Confidence 667777777654
No 156
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=97.99 E-value=3.5e-05 Score=70.60 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=72.5
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE--eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV--KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V--~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~L 302 (378)
.+.+..+...| .+.|++. +....|..... ...+... +..- .....+.+.+|+++.|.|...+.+.
T Consensus 63 ~L~i~~~~~~D---~G~Y~C~-~~n~~g~~~~~~~~l~v~~~-----~~~~---~~~~~~~~~~g~~v~l~C~~~~~p~- 129 (291)
T 1qz1_A 63 TLTIYNANIDD---AGIYKCV-VTAEDGTQSEATVNVKIFQK-----LMFK---NAPTPQEFKEGEDAVIVCDVVSSLP- 129 (291)
T ss_dssp EEEECSCCGGG---CEEEEEE-EECTTSCEEEEEEEEEEECC-----SEEE---ECCSSEEEETTSCEEECCEEECSSC-
T ss_pred EEEEecCCCCC---CEEEEEE-EEcCCCCeeEEEEEEEeecc-----cccc---CCCCcccccCCCeEEEEEEeccCCC-
Confidence 45555555554 5789988 44555433211 1111111 1100 1223467889999999999865533
Q ss_pred CCCCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCC-----eeeEEEeeeec
Q psy10772 303 ANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGN-----TVLCTHNLTVD 366 (378)
Q Consensus 303 a~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~-----~~l~~~~~~v~ 366 (378)
|.++|++++.+ +....+.++.. .+..|.|.+++..|+|.|.|.+.+ .......|.|.
T Consensus 130 --~~v~W~~~~~~-----~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~ 192 (291)
T 1qz1_A 130 --PTIIWKHKGRD-----VILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN 192 (291)
T ss_dssp --CEEEEEETTSC-----SSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE
T ss_pred --CEEEEEECCEE-----cccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe
Confidence 58999998764 32112333333 344599999999999999999875 22344455554
No 157
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.99 E-value=1.3e-05 Score=69.15 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=53.2
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---eeeE
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TVLC 359 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l~ 359 (378)
.+.+|+++.|.|...+.+ .|.++|++++.. + .....-|.|.+++.+|+|.|.|.+.| ..-+
T Consensus 108 ~v~~g~~~~l~C~~~~~p---~~~v~W~~~~~~-----~--------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~ 171 (184)
T 2ny1_B 108 HLLQGQSLTLTLESPPGS---SPSVQCRSPRGK-----N--------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEF 171 (184)
T ss_dssp EEETTCCEEEEEECCTTC---CCEEEEECTTSC-----E--------EEESSEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eeecCCCEEEEEEcCCCC---CCEEEEEeCCCc-----c--------ccCceEEEEecCCcCCCeEEEEEEEECCceEEE
Confidence 568899999999986543 468999876542 2 23456799999999999999999986 5556
Q ss_pred EEeeeeccc
Q psy10772 360 THNLTVDAH 368 (378)
Q Consensus 360 ~~~~~v~~~ 368 (378)
+..|.|.+.
T Consensus 172 ~~~l~V~~~ 180 (184)
T 2ny1_B 172 KIDIVVLAF 180 (184)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEec
Confidence 667776553
No 158
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.99 E-value=1.2e-05 Score=71.39 Aligned_cols=77 Identities=14% Similarity=0.056 Sum_probs=52.8
Q ss_pred ceeEEEEeC--CeeeeeeeeccCCCCCCCCeEEEEe---cccCceeeEeeccCcceE-eecCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWG--QSVHLSCFVKLPASMANQPMSWYHY---SKDKGRYQIKFRSDKFIR-TVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G--~s~~L~C~~r~~~~La~~~v~W~~~---~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
...+.+.+| +++.|.|.+..|. +.|+|... +.. +. .+.++. ....+|+|.+++.+|+|.|.|.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~p~----~~v~w~~~~~~g~~-----~~--~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~ 82 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSISN----LNVSLCARYPEKRF-----VP--DGNRISWDSKKGFTIPSYMISYAGMVFCE 82 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSSTT----CCEEEEEETTTEEE-----CC--CSSSCEEETTTEEEEEGGGTTTCSEEEEE
T ss_pred ceEEEEecCCCccEEEeeccCCCC----cEEEEEhhcCCCcc-----cc--CCCcccccCCccEEEccCChhcCceEEEE
Confidence 367889999 9999999986543 48999774 221 21 223332 3456899999999999999999
Q ss_pred eCC--eeeEE--Eeeeec
Q psy10772 353 LGN--TVLCT--HNLTVD 366 (378)
Q Consensus 353 ~~~--~~l~~--~~~~v~ 366 (378)
+.+ ....+ +.|.|.
T Consensus 83 a~n~~~~~~s~~~~l~v~ 100 (213)
T 2x1w_L 83 AKINDESYQSIMYIVVVV 100 (213)
T ss_dssp EC----CEECCCEEEEEC
T ss_pred EEECCeeEEEEEEEEEEe
Confidence 986 22222 566653
No 159
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=97.99 E-value=9.7e-06 Score=70.27 Aligned_cols=82 Identities=13% Similarity=0.196 Sum_probs=54.6
Q ss_pred ceeEEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEeeccCcceEe--e---------cCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--V---------DGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~---------~~GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|... +.+. +.++|+.++.+ |......++.. . ..-|.|.+++..|+
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~p~---~~v~W~~~g~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 9 PGNITGARGLTGTLRCQLQVQGEP---PEVHWLRDGQI-----LELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCCEEECTTCCEEEEEEEEEESSC---CCCEEEETTEE-----CCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred hhheEEecCCcEEEecccccCCCC---cEEEEEECCEE-----cccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 4567889999999999987 4433 57999998754 22100011111 1 23599999999999
Q ss_pred eEEEEEeCCe---ee-EEEeeeeccc
Q psy10772 347 GKYDCWLGNT---VL-CTHNLTVDAH 368 (378)
Q Consensus 347 G~Y~C~~~~~---~l-~~~~~~v~~~ 368 (378)
|.|.|.+.+. .. ....|.|...
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~ 106 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGL 106 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCS
T ss_pred cEEEEEEEeCCCceecccEEEEEecC
Confidence 9999999862 11 2256666544
No 160
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.99 E-value=1.9e-05 Score=71.86 Aligned_cols=126 Identities=18% Similarity=0.198 Sum_probs=72.1
Q ss_pred EEEEEEEeeeecCCCeEEEEEEECCCeeEEEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCCCC
Q psy10772 226 LVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQ 305 (378)
Q Consensus 226 IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~~ 305 (378)
+.+..++..| .+.|.+................+ .-. . ...+.+.+.+|+++.|.|...+....+.+
T Consensus 86 L~I~~v~~~D---~G~Y~C~~~~~~~~~~~~~~~~l-~V~-~---------~~p~~~~v~~G~~v~L~C~~~~~~~~p~~ 151 (268)
T 3mj6_A 86 LLLQDVQKAD---EGIYTCEIRLKNESMVMKKPVEL-WVL-P---------EEPRDLRVRVGDTTQMRCSIQSTEEKRVT 151 (268)
T ss_dssp EEECSCCGGG---CEEEEEEEEETTCCCEEEEEEEE-EEE-C---------CCCSEEEEETTCCEEECCBCEESSSSCCC
T ss_pred EEECCCCHhH---CEEEEEEEEecCCcceEEEEEEE-EEe-c---------cCCCccccccCCcEEEEEEecCCCCCCcc
Confidence 4555555555 57898885433222222221111 110 0 02246788899999999998544444556
Q ss_pred CeEEEEecccCceeeE--ee---------ccCc----ceE------eecCceEEeeecCCCCeEEEEEeCC---eeeEEE
Q psy10772 306 PMSWYHYSKDKGRYQI--KF---------RSDK----FIR------TVDGGLVIMAVEELDAGKYDCWLGN---TVLCTH 361 (378)
Q Consensus 306 ~v~W~~~~~~~~~~~l--~~---------~~~~----~~~------~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l~~~ 361 (378)
.++|+.+........+ .. ..+. ++. ....-|.|.+++.+|+|.|.|.+.| ..-++.
T Consensus 152 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 231 (268)
T 3mj6_A 152 KVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTI 231 (268)
T ss_dssp EEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEE
Confidence 8999986432110001 00 0111 111 1234599999999999999999987 445666
Q ss_pred eeee
Q psy10772 362 NLTV 365 (378)
Q Consensus 362 ~~~v 365 (378)
.|.|
T Consensus 232 ~l~V 235 (268)
T 3mj6_A 232 VLHV 235 (268)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6766
No 161
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=97.99 E-value=7.8e-06 Score=75.05 Aligned_cols=77 Identities=21% Similarity=0.276 Sum_probs=54.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeec--CceEEeeecCCCCeEEEEEeCC---
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD--GGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~--~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
.+.+.+|+++.|.|...+.+. |.++|++++.. |. .+.++.... .-|.|.+++.+|+|.|.|.+.|
T Consensus 203 ~~~~~~g~~~~l~C~~~g~p~---p~v~W~~~g~~-----~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G 272 (291)
T 2wim_A 203 NATAERGEEMTFSCRASGSPE---PAISWFRNGKL-----IE--ENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAG 272 (291)
T ss_dssp ECCSSSCCEEEEECBCCCBSC---CEEEEEETTEE-----CC--CTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTE
T ss_pred cceecCCCeEEEEEEeecCCC---CeEEEEECCEE-----Cc--CCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCC
Confidence 345678999999999875543 68999998754 33 333433332 2399999999999999999998
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
..-++-.|.|.+
T Consensus 273 ~~~~~~~l~v~~ 284 (291)
T 2wim_A 273 EDEKQAFLQVFV 284 (291)
T ss_dssp EEEEEEEEEC--
T ss_pred ceeeeEEEEEEE
Confidence 556666666654
No 162
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=97.98 E-value=4.6e-05 Score=67.05 Aligned_cols=87 Identities=22% Similarity=0.281 Sum_probs=56.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcc---------eEeecCceEEeeecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF---------IRTVDGGLVIMAVEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~---------~~~~~~GLlI~~v~~~DsG~Y 349 (378)
.....+.+|+++.|.|...+.+. |.+.|+.+....+. .+......+ ......-|.|.+++..|+|.|
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~---p~v~W~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 200 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQ---PHIQWIKHVEKNGS-KYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEY 200 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSC---CEEEEEEECCBTTB-SBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCC---CEEEEEECCCCCCc-cccCCCcceEeEecccccccCCccEEEEecCCHHHCeEE
Confidence 34567889999999999865543 58999983221111 121000001 011122399999999999999
Q ss_pred EEEeCC---eeeEEEeeeecccc
Q psy10772 350 DCWLGN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v~~~~ 369 (378)
.|.+.| ..-.+..|.|...+
T Consensus 201 ~C~a~n~~g~~~~~~~l~V~~~p 223 (231)
T 3ojm_B 201 ICKVSNYIGQANQSAWLTVLPKQ 223 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEEEeccceEeeEEEEEEecCC
Confidence 999987 45667777776543
No 163
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=97.98 E-value=1.2e-05 Score=82.62 Aligned_cols=79 Identities=24% Similarity=0.467 Sum_probs=58.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cC---ceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DG---GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~---GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.|+|+.++.+ |. .++++.+. ++ -|.|.+++.+|+|.|.|.+.|
T Consensus 392 ~~~~~~~G~~v~l~C~~~g~P~---p~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N 461 (570)
T 3b43_A 392 HPVETLKGADVHLECELQGTPP---FQVSWHKDKRE-----LR--SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASN 461 (570)
T ss_dssp CCEEECTTCCEEEEEEEESSSS---CCCEEEETTEE-----CC--SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CceeecCCCEEEEEEEEecCCC---CEEEEEECCEE-----Cc--CCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEE
Confidence 3456788999999999976544 68999998754 43 33333322 22 388999999999999999988
Q ss_pred ---eeeEEEeeeeccc
Q psy10772 356 ---TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ---~~l~~~~~~v~~~ 368 (378)
...++..|.|...
T Consensus 462 ~~G~~~~~~~l~v~~~ 477 (570)
T 3b43_A 462 DVGSDTCVGSITLKAP 477 (570)
T ss_dssp SSCEEEEEEEEEECCC
T ss_pred CCCeEEEEEEEEeccC
Confidence 5667778888754
No 164
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=97.97 E-value=1.8e-05 Score=73.68 Aligned_cols=83 Identities=20% Similarity=0.315 Sum_probs=55.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcc-eEeecCc----eEEeeecC-CCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF-IRTVDGG----LVIMAVEE-LDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~-~~~~~~G----LlI~~v~~-~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.. +. .+.. +....+| |.|.+++. .|+|.|.|.
T Consensus 13 p~~~~v~~G~~v~l~C~~~g~p~---~~i~W~k~g~~-----i~--~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~ 82 (304)
T 2yd9_A 13 PKDQIGVSGGVASFVCQATGDPK---PRVTWNKKGKK-----VN--SQRFETIEFDESAGAVLRIQPLRTPRDENVYECV 82 (304)
T ss_dssp CCCEEEETTSCEEEEEEEECSSC---CEEEEC--------------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEE
T ss_pred CCceEecCCCeEEEEEEEEEeCC---CeEEEEECCEE-----CC--CCceEEEEecCCCceEEEEecccccCCCeEEEEE
Confidence 45678899999999999865433 58999988764 32 2221 2222343 99999998 999999999
Q ss_pred eCC---eeeEEEeeeecccccC
Q psy10772 353 LGN---TVLCTHNLTVDAHSNV 371 (378)
Q Consensus 353 ~~~---~~l~~~~~~v~~~~c~ 371 (378)
+.| ..-.+..|+|....-.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~~ 104 (304)
T 2yd9_A 83 AQNSVGEITVHAKLTVLREDQL 104 (304)
T ss_dssp EECSSCEECCEEEEEEECGGGC
T ss_pred EECCCCeEEEEEEEEEeccccC
Confidence 987 4456777877765443
No 165
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=97.97 E-value=3.3e-05 Score=68.16 Aligned_cols=68 Identities=22% Similarity=0.379 Sum_probs=48.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-cCcceEee----cCceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-SDKFIRTV----DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-~~~~~~~~----~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
....+.+|+++.|.|...+.+. |.++|+.++.+ |... ...++... ..-|.|.+++.+|+|.|.|.+.
T Consensus 116 ~~~~~~~g~~v~l~C~~~g~p~---p~v~W~~~g~~-----l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 187 (212)
T 2yd6_A 116 QLKVVERTRTATMLCAASGNPD---PEITWFKDFLP-----VDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVAT 187 (212)
T ss_dssp CCEEEETTSCEEEEEEEECSSC---CEEEEEETTEE-----C------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred cceeEecCCCEEEEEEecCCCC---CeEEEEECCcc-----ccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEE
Confidence 4467788999999999975543 68999998754 3211 11232222 2459999999999999999998
Q ss_pred C
Q psy10772 355 N 355 (378)
Q Consensus 355 ~ 355 (378)
|
T Consensus 188 N 188 (212)
T 2yd6_A 188 N 188 (212)
T ss_dssp E
T ss_pred C
Confidence 7
No 166
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=97.97 E-value=1.4e-05 Score=73.30 Aligned_cols=81 Identities=23% Similarity=0.468 Sum_probs=57.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE--ee--cCceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR--TV--DGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~--~~--~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
...+.+.+|+++.|.|...+.+. +.++|+.++.+ +. .+.++. .. ...|.|.+++..|+|.|.|.+.
T Consensus 12 p~~~~~~~G~~v~l~C~~~g~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 12 PVSVDLALGESGTFKCHVTGTAP---IKITWAKDNRE-----IR--PGGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp CCCEEEETTCCEEEEEEEESSSC---CEEEEEETTEE-----CC--SSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred ccceEecCCCcEEEEEEEEcCCC---CEEEEEECCEE-----Cc--CCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEE
Confidence 34567889999999999875433 58999988754 32 222221 11 2359999999999999999997
Q ss_pred C---eeeEEEeeeecccc
Q psy10772 355 N---TVLCTHNLTVDAHS 369 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~~ 369 (378)
+ ..-++..|.|...+
T Consensus 82 n~~g~~~~~~~l~V~~~p 99 (284)
T 2rik_A 82 NVAGKDSCSAQLGVQEPP 99 (284)
T ss_dssp ETTEEEEEEEEEEEECCC
T ss_pred ECCceEEEEEEEEccCCC
Confidence 6 45567777776543
No 167
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.96 E-value=2e-05 Score=71.92 Aligned_cols=78 Identities=12% Similarity=0.133 Sum_probs=52.3
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeecCc------eEEe
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVDGG------LVIM 339 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~~G------LlI~ 339 (378)
..+.+++.+|+++.|.|..... .++.+.|.|+.+...+....+.. . ..+|+....++ |.|.
T Consensus 12 ~~~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 90 (256)
T 3juy_B 12 QSGAEVKKPGASVKVSCQASGY-RFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 90 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCceecCCCeEEEEEEeecc-cccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEEC
Confidence 3567889999999999998652 22335899987643222111110 0 12355544222 9999
Q ss_pred eecCCCCeEEEEEeCCe
Q psy10772 340 AVEELDAGKYDCWLGNT 356 (378)
Q Consensus 340 ~v~~~DsG~Y~C~~~~~ 356 (378)
+|+.+|+|.|.|.+.+.
T Consensus 91 ~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 91 SLRSADTAVYYCARVGE 107 (256)
T ss_dssp SCCGGGCEEEEEEECCC
T ss_pred CCCcccCEEEEEeEEec
Confidence 99999999999999875
No 168
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=97.96 E-value=2.4e-05 Score=66.98 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=53.6
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee---ccCcceEeec----CceEEeeecCCCCeEEEEEeC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF---RSDKFIRTVD----GGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~---~~~~~~~~~~----~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+|+++.|.|...+.+. |.++|+.++... .+.. ..+.++.... .-|.|.+++.+|+|.|.|.+.
T Consensus 104 ~~~~~g~~v~l~C~~~~~p~---~~v~W~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 177 (192)
T 2va4_A 104 ETTYENGQVTLVCDAEGEPI---PEITWKRAVDGF---TFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 177 (192)
T ss_dssp EEECTTSEEEEEEEEEEESC---CEEEEEETTTTE---EECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred ceEEeCCeEEEEEEecCCCC---CcEEEEeCCCCc---eeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEE
Confidence 45677999999999875543 579999874320 1210 0123333321 349999999999999999998
Q ss_pred C---eeeEEEeeeec
Q psy10772 355 N---TVLCTHNLTVD 366 (378)
Q Consensus 355 ~---~~l~~~~~~v~ 366 (378)
| ..-++..|.|+
T Consensus 178 n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 178 SRIGGHQKSMYLDIE 192 (192)
T ss_dssp CSSCEEEEEEEEEEC
T ss_pred ecCCceEEEEEEEeC
Confidence 7 55666666663
No 169
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.96 E-value=2.8e-05 Score=69.77 Aligned_cols=90 Identities=18% Similarity=0.233 Sum_probs=57.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC-CCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS-MANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~-La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|.....+. ...+.|.|+.+........+.. ..+.|+..... -|.|.+|+.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDV 87 (240)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhC
Confidence 34578899999999999876541 0125799998743211111110 01234443322 399999999999
Q ss_pred eEEEEEeCCe----eeEEEeeeeccc
Q psy10772 347 GKYDCWLGNT----VLCTHNLTVDAH 368 (378)
Q Consensus 347 G~Y~C~~~~~----~l~~~~~~v~~~ 368 (378)
|.|.|.+.+. .-....|+|...
T Consensus 88 G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 88 ATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred EEEEEEEccCCceeecCCEEEEEecC
Confidence 9999999884 223456777654
No 170
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.96 E-value=2.8e-05 Score=68.38 Aligned_cols=87 Identities=21% Similarity=0.141 Sum_probs=53.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec-C---ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD-G---GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~-~---GLlI~~v~~~DsG~ 348 (378)
..+.+.+|+++.|.|...+.+....+.|.|+.+........+.. ...+|+.... . .|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 87 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAI 87 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEE
Confidence 45778899999999998654321024799998753211100100 0123443322 2 49999999999999
Q ss_pred EEEEeCCeee----EEEeeeec
Q psy10772 349 YDCWLGNTVL----CTHNLTVD 366 (378)
Q Consensus 349 Y~C~~~~~~l----~~~~~~v~ 366 (378)
|.|.+.+..- ....|+|.
T Consensus 88 Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 88 YFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp EEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEecCchhhcCCCeEEEEe
Confidence 9999987432 22356664
No 171
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=97.95 E-value=2.7e-05 Score=63.60 Aligned_cols=93 Identities=19% Similarity=0.145 Sum_probs=54.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-cC---ceEEeeecCCCCeEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DG---GLVIMAVEELDAGKY 349 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~---GLlI~~v~~~DsG~Y 349 (378)
.+.+.+|+++.|.|.......-..+.+.|+.+...++...|-. ...+|+... .. -|.|.+++.+|+|.|
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~DsG~Y 88 (120)
T 1oaq_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIY 88 (120)
T ss_dssp EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChhhCeEE
Confidence 3788999999999998644210124689998754322211210 012344332 12 399999999999999
Q ss_pred EEEeCCeee----EEEeeeecccccCCC
Q psy10772 350 DCWLGNTVL----CTHNLTVDAHSNVAD 373 (378)
Q Consensus 350 ~C~~~~~~l----~~~~~~v~~~~c~~~ 373 (378)
.|...+..- ..-.|+|....-..|
T Consensus 89 ~C~~~~~~~~~fg~gt~L~V~~~~~~~p 116 (120)
T 1oaq_L 89 FCALWYSNHLVFGGGTKLTVLGQPKSSP 116 (120)
T ss_dssp EEEEEETTEEEECCCEEEEECC------
T ss_pred EEEEccCCCcEECCCEEEEEcCCCCCCC
Confidence 999875211 123777766554444
No 172
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.94 E-value=3.7e-05 Score=66.67 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=58.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCC-CCCeEEEEecccC-----------ceeeEe---eccCcceEee-------cCce
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMA-NQPMSWYHYSKDK-----------GRYQIK---FRSDKFIRTV-------DGGL 336 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La-~~~v~W~~~~~~~-----------~~~~l~---~~~~~~~~~~-------~~GL 336 (378)
.+.+.+.+|+++.|.|....++... .+.|+|++++... +...+. .....|+... ..-|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 4678899999999999987654321 3579999864321 000010 0012333332 2349
Q ss_pred EEeeecCCCCeEEEEEeCC---eeeEEEeeeeccc
Q psy10772 337 VIMAVEELDAGKYDCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 337 lI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~~~ 368 (378)
.|.+++.+|+|.|.|.+.+ ..-....|.|...
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~ 121 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcC
Confidence 9999999999999999976 3566677777654
No 173
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.94 E-value=2.3e-05 Score=63.13 Aligned_cols=74 Identities=16% Similarity=0.286 Sum_probs=50.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-cC---ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DG---GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~---GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+...++...|-. ...+|+... .. -|.|.+|+.+|+|
T Consensus 11 p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 87 (111)
T 1i3g_L 11 HKFMSTSVGDRVSITCKASQDV---GTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLA 87 (111)
T ss_dssp CSEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred CCEEEEcCCCCEEEEEEeCCCC---CCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCE
Confidence 3467888999999999986443 24799998864322211211 012344432 11 3999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 88 ~Y~C~~~~ 95 (111)
T 1i3g_L 88 DYFCQQYS 95 (111)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 99999986
No 174
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.94 E-value=2.3e-05 Score=63.54 Aligned_cols=75 Identities=21% Similarity=0.319 Sum_probs=50.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee------cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV------DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~------~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|.....+ .+.+.|.|+.+........+ +..+.|+... .--|.|.+++.+|+|.|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~~-~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 84 (113)
T 1sq2_N 7 PRSVTKETGESLTINCVLRDAS-YALGSTCWYRKKSGEGNEES-ISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCG 84 (113)
T ss_dssp CSEEEECTTCCEEEEEEECSCS-SCCCCEEEEEEETTSCCCEE-CCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CccEEEecCCCEEEEEEECCCc-CCCCEEEEEEeCCCCCceEe-EEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 3457888999999999986443 22357999988532221111 1223444332 11399999999999999999
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
+.+
T Consensus 85 ~~~ 87 (113)
T 1sq2_N 85 LGV 87 (113)
T ss_dssp ECB
T ss_pred EEe
Confidence 875
No 175
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.93 E-value=2.7e-05 Score=69.09 Aligned_cols=88 Identities=16% Similarity=0.223 Sum_probs=56.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-eeccCc-c---eEeecCceEEeeecCCCCeEEEEEeC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-KFRSDK-F---IRTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~~~~~~-~---~~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+.+|+++.|.|...+.+.. .+.++|+.++.+..+... ....+. + ......-|.|.+++.+|+|.|.|.+.
T Consensus 113 ~~~~v~~G~~v~L~C~~~g~p~~-~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 191 (213)
T 2x1w_L 113 HGIELSVGEKLVLNCTARTELNV-GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 191 (213)
T ss_dssp SCEEEETTCCEEEEEEEEECTTB-CCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEcCCCCEEEEEEEECCCCC-ceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEe
Confidence 34588999999999999753321 136899888765221000 000000 0 01112349999999999999999998
Q ss_pred C---eeeEEEeeeeccc
Q psy10772 355 N---TVLCTHNLTVDAH 368 (378)
Q Consensus 355 ~---~~l~~~~~~v~~~ 368 (378)
| ..-++..|+|.+.
T Consensus 192 N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 192 SGLMTKKNSTFVRVHED 208 (213)
T ss_dssp CSSCEEEEEEEEEEEC-
T ss_pred cCCCcEEEEEEEEEecc
Confidence 8 5577778888654
No 176
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.93 E-value=1.5e-05 Score=69.76 Aligned_cols=59 Identities=15% Similarity=0.193 Sum_probs=45.3
Q ss_pred EEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCeee
Q psy10772 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVL 358 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~l 358 (378)
+.+|+++.|.|.. | .|.|+|+.++.+ |. .... ...-|.|.+++.+|+|.|.|.+.|..-
T Consensus 119 ~~~G~~v~l~C~~--p----~p~i~W~k~g~~-----i~--~~~~---~~~~L~i~~v~~~D~G~Y~C~a~N~~g 177 (186)
T 1jbj_A 119 SRGDGSVLLTCGL--T----DKTIKWLKDGSI-----IS--PLNA---TKNTWNLGNNAKDPRGTYQCQGAKETS 177 (186)
T ss_dssp CSSSCEEEEECSS--S----CSCEEEEETTEE-----CC--CSSC---CSSCCEEEETTSCCEEEEEEEESSCEE
T ss_pred cCCCCeEEEEeeC--C----CCeEEEEECCEE-----Cc--ccCC---CcceEEECCCCcCcCEEEEEEEEcCcC
Confidence 3489999999987 3 358999998764 42 2221 456699999999999999999998443
No 177
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=97.93 E-value=7.2e-06 Score=70.92 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=54.5
Q ss_pred EEEEe-CCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC--eee
Q psy10772 282 QTVTW-GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--TVL 358 (378)
Q Consensus 282 ~~~~~-G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--~~l 358 (378)
+.+.+ |+++.|.|...+.+. +.+.++|+.++.+ +. .+. ....+..|.|.+++..|+|.|.|.+.+ ...
T Consensus 12 ~~v~~~G~~v~l~C~~~~~~~-~~~~v~W~~~~~~-----~~--~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~ 82 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSSSH-TLMYSYWTKNGVE-----LT--ATR-KNASNMEYRINKPRAEDSGEYHCVYHFVSAPK 82 (190)
T ss_dssp EECCCSSSCEEEEEEEEECSS-CEEEEEEEETTEE-----CT--TCC-BCCSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEccCCceEEEEEEeccCCC-CceEEEEEECCEE-----Cc--ccc-eEeccEEEEEecCCcccCEEEEEEEEeCCccc
Confidence 45556 999999999875443 2247899988654 32 222 223455699999999999999999975 455
Q ss_pred EEEeeeecc
Q psy10772 359 CTHNLTVDA 367 (378)
Q Consensus 359 ~~~~~~v~~ 367 (378)
.+..|.|..
T Consensus 83 ~~~~l~V~~ 91 (190)
T 2wv3_A 83 ANATIEVKA 91 (190)
T ss_dssp EEEEEEEEC
T ss_pred ccEEEEEec
Confidence 666676654
No 178
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.93 E-value=3.2e-05 Score=62.56 Aligned_cols=73 Identities=19% Similarity=0.163 Sum_probs=48.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-----------cCcceEeecC---ceEEeeecCCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-----------SDKFIRTVDG---GLVIMAVEELD 345 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-----------~~~~~~~~~~---GLlI~~v~~~D 345 (378)
+.+.+.+|+++.|.|.....+ .+.|.|+.+....+...|-.. .++|+..... -|.|.+++.+|
T Consensus 9 ~~~~v~~G~~vtL~C~~~~~~---~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~L~I~~~~~~D 85 (112)
T 1fo0_B 9 RWRLVPRGQAVNLRCILKNSQ---YPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQ 85 (112)
T ss_dssp SEEECCTTCCEEEEEEESCTT---CCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETTEEEEEEESCCS
T ss_pred CeEEEecCCcEEEEEEeCCCC---CceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCCeEEEcCCCHhH
Confidence 457788999999999985322 247999987543222112100 0144443211 59999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|...+
T Consensus 86 sg~Y~C~~~~ 95 (112)
T 1fo0_B 86 GRTLYCTCSA 95 (112)
T ss_dssp CEEEEEEEES
T ss_pred CEEEEEEEEc
Confidence 9999999864
No 179
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=97.92 E-value=1.5e-05 Score=73.83 Aligned_cols=79 Identities=10% Similarity=0.126 Sum_probs=56.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~~ 354 (378)
+..+.+.+|+++.|.|... ...+.|.++|+.++.+ |. .+.++..... -|.|.+++.+|+|.|.|.+.
T Consensus 8 ~~~~~v~eg~~v~l~~~~~--~~~p~~~v~W~k~~~~-----i~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~ 78 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECD--KMTPKSEFSWSKDYVS-----TE--DSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVT 78 (312)
T ss_dssp CCEEEECTTCCEEEEEECS--SCCTTCCEEEEETTEE-----CT--TCTTEEEEEETTEEEEEESSCCGGGCEEEEEEES
T ss_pred ceeEEEecCCeEEEEEEEe--CCCCCcEEEEEECCEE-----CC--CCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEE
Confidence 4567788999999998875 2234468999998754 32 3445444443 49999999999999999999
Q ss_pred C--eeeEEEeeeec
Q psy10772 355 N--TVLCTHNLTVD 366 (378)
Q Consensus 355 ~--~~l~~~~~~v~ 366 (378)
+ ..-.++.|.|.
T Consensus 79 n~~g~~~s~~l~v~ 92 (312)
T 2y23_A 79 DTDGIASSYLIDEE 92 (312)
T ss_dssp SSCCCCEEEEECHH
T ss_pred eCCCcEEEEEEEEe
Confidence 7 22235666654
No 180
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.92 E-value=2.8e-06 Score=79.36 Aligned_cols=80 Identities=14% Similarity=0.263 Sum_probs=58.9
Q ss_pred CcccccccceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEE
Q psy10772 271 SICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350 (378)
Q Consensus 271 ~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~ 350 (378)
..|.....+..+.+.+|+++.|.|...+.+. .+.++|+.++.+.. +....+.++...+..|.|.+++.+|+|.|.
T Consensus 4 ~~c~~~~~~~~~~v~~G~~v~L~C~~~~~~~--~~~v~W~k~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 78 (315)
T 1itb_B 4 DKCKEREEKIILVSSANEIDVRPCPLNPNEH--KGTITWYKDDSKTP---VSTEQASRIHQHKEKLWFVPAKVEDSGHYY 78 (315)
T ss_dssp --CCCBCCCCCCEEETTSCCCCBCCCCSCCC--SSCCCEECTTSCSC---SCCCTTSSSEECSSBEECTTCCGGGCSCCE
T ss_pred ccchhhcCceEEEEcCCCcEEEEeeccCcCC--CceEEEEeCCCcCc---cccccCCcEeccCCeEEECCCChhhCEEEE
Confidence 4577555566788999999999999865542 24899998875311 222245566666778999999999999999
Q ss_pred EEeCC
Q psy10772 351 CWLGN 355 (378)
Q Consensus 351 C~~~~ 355 (378)
|.+.|
T Consensus 79 C~a~n 83 (315)
T 1itb_B 79 CVVRN 83 (315)
T ss_dssp ECCCS
T ss_pred EEEeC
Confidence 99987
No 181
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.92 E-value=2.1e-05 Score=72.32 Aligned_cols=85 Identities=19% Similarity=0.256 Sum_probs=57.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe---eccCcceEeecCceEEeeecCCCCeEEEEEeCC--
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK---FRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~---~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
...+.+|+++.|.|...+.+. |.++|++++...++. +. ............-|.|.+++.+|+|.|.|.+.|
T Consensus 190 ~~~v~~G~~v~L~C~~~g~p~---p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 265 (289)
T 3mjg_X 190 QTVVRQGENITLMCIVIGNEV---VNFEWTYPRKESGRL-VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESV 265 (289)
T ss_dssp CSEEETTSCEEEEEEEESCSS---BEEEEECTTSSSSCC-CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETT
T ss_pred cceeEcCCCEEEEEEECCCCC---cceEEEcCCccCCCc-ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCC
Confidence 356889999999999976543 589999876542210 10 000000011234599999999999999999988
Q ss_pred -eeeEEEeeeecccc
Q psy10772 356 -TVLCTHNLTVDAHS 369 (378)
Q Consensus 356 -~~l~~~~~~v~~~~ 369 (378)
..-++-.|+|...+
T Consensus 266 G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 266 NDHQDEKAINITVVE 280 (289)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCceeEEEEEEEEEe
Confidence 56666677666543
No 182
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.92 E-value=1.5e-05 Score=71.47 Aligned_cols=74 Identities=26% Similarity=0.262 Sum_probs=49.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCce-----eeEe----------ecc--CcceEe-ecCceEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR-----YQIK----------FRS--DKFIRT-VDGGLVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~-----~~l~----------~~~--~~~~~~-~~~GLlI~~ 340 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.+-.. ++.. ..+ ..+... ...-|.|.+
T Consensus 143 ~~~~~v~~g~~v~L~C~~~g~p~---p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 219 (250)
T 2fbo_J 143 AEVVQVDEGNDITMTCPCTDCAN---ANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRA 219 (250)
T ss_dssp CSEEECCTTCCEEECCCEESCTT---CEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECS
T ss_pred CceEEecCCCcEEEEEEecCCCC---CeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEec
Confidence 34567778999999999976433 58999998754110 0000 000 011111 225699999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
++.+|+|.|.|.+.|
T Consensus 220 v~~~D~G~Y~C~a~N 234 (250)
T 2fbo_J 220 AKITDAGRVWCELAT 234 (250)
T ss_dssp CCGGGCEEEEEEEES
T ss_pred CCcccCEEEEEEecC
Confidence 999999999999998
No 183
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.92 E-value=1.7e-05 Score=68.79 Aligned_cols=89 Identities=19% Similarity=0.259 Sum_probs=60.7
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee-----eEeeccCcceEeecCceEEeeecCCCCeEEEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY-----QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~-----~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
....+.+.+|+++.|.|...+.+. +.++|+.++.....+ .+......++......|.|.+++..|+|.|.|.
T Consensus 10 ~~~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~ 86 (209)
T 1nbq_A 10 SEPEVRIPENNPVKLSCAYSGFSS---PRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCM 86 (209)
T ss_dssp SCSBCCEETTCCCEEECEEESCSS---EEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEE
T ss_pred CCCceEEEcCCCEEEEEEEeCCCC---cEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEE
Confidence 345677889999999999875433 589999987541000 011112445666667799999999999999999
Q ss_pred eCC-----eeeEEEeeeecccc
Q psy10772 353 LGN-----TVLCTHNLTVDAHS 369 (378)
Q Consensus 353 ~~~-----~~l~~~~~~v~~~~ 369 (378)
+.+ ..-....|.|...+
T Consensus 87 ~~~~~g~~~~~~~~~l~V~~~p 108 (209)
T 1nbq_A 87 VSEEGGNSYGEVKVKLIVLVPP 108 (209)
T ss_dssp EEETTSSCEECCEEECCEEBCC
T ss_pred EecCCCCccceEEEEEEEecCC
Confidence 875 23345666665443
No 184
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.92 E-value=3.1e-05 Score=62.58 Aligned_cols=77 Identities=14% Similarity=0.241 Sum_probs=50.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC---CCCCCeEEEEecccCceeeEee-------ccCcceEeec-C---ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS---MANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD-G---GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~---La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~-~---GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|.....+. ...+.|.|+.+....+...|-. ...+|+.... . -|.|.+++.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 87 (114)
T 1eeq_A 8 PDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAE 87 (114)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcc
Confidence 34678899999999999864431 0124799998753322211210 0123444322 1 3999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|.+.+
T Consensus 88 DsG~Y~C~~~~ 98 (114)
T 1eeq_A 88 DVAVYYCQQYY 98 (114)
T ss_dssp GCEEEEEEECS
T ss_pred cCEEEEEEEee
Confidence 99999999986
No 185
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.92 E-value=3.3e-05 Score=67.10 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=55.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee---eEee--ccCcceEe--ecCceEEeeecCCCCeEEEEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY---QIKF--RSDKFIRT--VDGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~---~l~~--~~~~~~~~--~~~GLlI~~v~~~DsG~Y~C~ 352 (378)
+.+.+.+|+++.|.|... + +.+.|.|++++..-..+ .... +..+|+.. ....|.|.+++..|+|.|.|.
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~---~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~ 78 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-V---PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEME 78 (171)
T ss_dssp EEEEEETTCCEEECCCCS-S---CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEE
T ss_pred cEEEEEcCCCEEEcCCCC-C---CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEE
Confidence 467899999999999873 2 33589999875420000 0100 01224333 234599999999999999999
Q ss_pred eCCe-eeEEEeeeeccc
Q psy10772 353 LGNT-VLCTHNLTVDAH 368 (378)
Q Consensus 353 ~~~~-~l~~~~~~v~~~ 368 (378)
+.+. ....+.|.|.+.
T Consensus 79 ~~n~~~~~~~~L~V~~~ 95 (171)
T 1ccz_A 79 SPNITDTMKFFLYVLEM 95 (171)
T ss_dssp CTTCCSCEEEEEEEECC
T ss_pred EeCCCCcEEEEEEEECc
Confidence 9762 256677777653
No 186
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=97.92 E-value=1.5e-05 Score=73.77 Aligned_cols=82 Identities=26% Similarity=0.337 Sum_probs=57.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--ecC---ceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--VDG---GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~~~---GLlI~~v~~~DsG~Y~C~~ 353 (378)
.+.+.+.+|+++.|.|...+.+. +.|+|+.++.+ +.. .+.++.. ..+ -|.|.+++..|+|.|.|.+
T Consensus 11 p~~~~v~~G~~v~l~C~~~g~p~---~~v~W~~~~~~-----~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 81 (305)
T 2nzi_A 11 LRNLNVRYQSNATLVCKVTGHPK---PIVKWYRQGKE-----IIA-DGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81 (305)
T ss_dssp CCCEEECTTCCEEEEEEEECSSC---CEEEEEETTEE-----CCC-CSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEE
T ss_pred ccceEEeCCCcEEEEEEEeCCCC---CeEEEEECCEE-----ccc-CCCeEEEEECCCCEEEEEEccCChhhCeEEEEEE
Confidence 35678899999999999865543 58999998754 321 1222222 233 3999999999999999999
Q ss_pred CC---eeeEEEeeeecccc
Q psy10772 354 GN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 354 ~~---~~l~~~~~~v~~~~ 369 (378)
.| ..-.+..|.|....
T Consensus 82 ~n~~g~~~~~~~l~V~~~p 100 (305)
T 2nzi_A 82 TNQGGSVSGTASLEVEVPA 100 (305)
T ss_dssp EETTEEEEEEEEEEECEEE
T ss_pred EcCCCCccceEEEEEecCC
Confidence 76 44556667776443
No 187
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.91 E-value=1.4e-05 Score=75.70 Aligned_cols=125 Identities=16% Similarity=0.212 Sum_probs=74.3
Q ss_pred EEEEEEEeeeecCCC-eEEEEEEECCCeeEEEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCCC
Q psy10772 226 LVVDVVQYEVFGTTS-EYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMAN 304 (378)
Q Consensus 226 IaVd~v~~~~~~~~~-~ytV~flGT~~G~v~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~ 304 (378)
+.+..++..| .+ .|++. +....|...... ...+-... ..+.. ....+.+.+|+++.|.|...+.+. .
T Consensus 91 L~i~~v~~~D---~Gs~Y~C~-a~n~~g~~~~~~---~~~v~~~~-p~~~~--~~~~~~~~~G~~v~L~C~~~g~p~--~ 158 (329)
T 3oq3_B 91 LWIANYTSND---SHRRYLCT-VTTKNGDCVQGI---VRSHIRKP-PSCIP--ETYELGTHDKYGIDLYCGILYAKH--Y 158 (329)
T ss_dssp EEESSCCGGG---GGCCEEEE-EECTTSCEEEEE---EEEEECCC-CSCEE--EEEETTSSTTTCEEEECCCCSCCC--C
T ss_pred EEEcCCChHh---CCCcEEEE-EEeCCCceeeEE---EEEEEcCC-CcEec--cccceEEeCCCcEEEEeccCCCCC--C
Confidence 4444454444 57 79997 455565432211 11111111 22221 111223567999999998866541 3
Q ss_pred CCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe-----eeEE----Eeeeeccc
Q psy10772 305 QPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT-----VLCT----HNLTVDAH 368 (378)
Q Consensus 305 ~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~-----~l~~----~~~~v~~~ 368 (378)
|.++|+.++.+ +. ..+.++......|.|.+++.+|+|.|.|.+.|. .... ..|+|...
T Consensus 159 ~~i~W~k~~~~-----l~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~ 225 (329)
T 3oq3_B 159 NNITWYKNNQE-----LI-IDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPS 225 (329)
T ss_dssp CEEEEEETTEE-----CC-CSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECC
T ss_pred ceEEEEECCcc-----CC-CCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECC
Confidence 68999988754 32 123455555778999999999999999999853 3233 66777643
No 188
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.91 E-value=4.6e-05 Score=67.77 Aligned_cols=86 Identities=14% Similarity=0.218 Sum_probs=55.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-c---CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-D---GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~---~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+........+.. ..++|+... . ..|.|.+|+.+|+|
T Consensus 31 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 107 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRASQDV---STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFA 107 (237)
T ss_dssp CSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEEEeCCCcEEEEEecCCCC---CceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCe
Confidence 3467899999999999986553 35899988643222111110 112343332 1 23999999999999
Q ss_pred EEEEEeCCee----eEEEeeeecc
Q psy10772 348 KYDCWLGNTV----LCTHNLTVDA 367 (378)
Q Consensus 348 ~Y~C~~~~~~----l~~~~~~v~~ 367 (378)
.|.|.+.+.. -....|.|..
T Consensus 108 ~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 108 TYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp EEEEEECSSSSCEECCCEEEEEEC
T ss_pred EEEEeeccCCceEEcCcEEEEEec
Confidence 9999997622 2334666644
No 189
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.91 E-value=3.8e-05 Score=61.94 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=49.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCC--CCCCCeEEEEecccCceeeEee-------ccCcceEeec-C---ceEEeeecCCCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPAS--MANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD-G---GLVIMAVEELDA 346 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~--La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~-~---GLlI~~v~~~Ds 346 (378)
+.+.+.+|+++.|+|....... ...+.|.|+.+...++...|-. ...+|+.... . -|.|.+|+.+|+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 88 (113)
T 1dlf_L 9 LSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDL 88 (113)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCCChHHC
Confidence 4578899999999999864431 0124799998754322211211 0123444321 2 399999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|...+
T Consensus 89 G~Y~C~~~~ 97 (113)
T 1dlf_L 89 GVYFCSQST 97 (113)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999986
No 190
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.91 E-value=2.6e-05 Score=69.52 Aligned_cols=76 Identities=20% Similarity=0.303 Sum_probs=48.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC-------ceeeEee----ccCcceEeec-------CceEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK-------GRYQIKF----RSDKFIRTVD-------GGLVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~-------~~~~l~~----~~~~~~~~~~-------~GLlI~~ 340 (378)
.+.+.+.+|+++.|+|....++......|+|+.++... ++. +.. .-..|+.... .-|.|.+
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~-~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKE-VEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEE-CGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeE-cccccCccccceEEEecccccCCeEEEEEee
Confidence 45678999999999998865444333368998765431 110 000 0011222111 1399999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
|+.+|+|.|.|.+.|
T Consensus 90 v~~~D~G~Y~C~a~n 104 (226)
T 4f80_A 90 VTASDSGKYLCYFQD 104 (226)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CchHHCeeEEEEEEC
Confidence 999999999999987
No 191
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.91 E-value=4.7e-05 Score=66.84 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=53.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee-cC---ceEEeeecCCCCeEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV-DG---GLVIMAVEELDAGKY 349 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~-~~---GLlI~~v~~~DsG~Y 349 (378)
.+.+.+|+++.|.|...+.+ .+.|.|+.+........+... ..+|+... .. -|.|.+|+.+|+|.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLS---DVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADY 85 (213)
T ss_dssp EEEEETTSCEEEEEECSSTT---TSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEcCCCC---CceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEE
Confidence 67899999999999986333 358999885432221111100 12233321 22 299999999999999
Q ss_pred EEEeCCee------eEEEeeeecc
Q psy10772 350 DCWLGNTV------LCTHNLTVDA 367 (378)
Q Consensus 350 ~C~~~~~~------l~~~~~~v~~ 367 (378)
.|.+.+.. -....|.|..
T Consensus 86 ~C~~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 86 YCQSWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp EEEEEETTTTEEEEBCCEEEEEEC
T ss_pred EEEeccCCcceeEEcCceEEEEeC
Confidence 99997622 2345666654
No 192
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.90 E-value=1.2e-05 Score=75.87 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=64.4
Q ss_pred Cccccc-ccceeEEEEeCCeeeeeeeeccCC----CCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCC
Q psy10772 271 SICESS-VGRLKQTVTWGQSVHLSCFVKLPA----SMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELD 345 (378)
Q Consensus 271 ~~C~~~-~~~k~~~~~~G~s~~L~C~~r~~~----~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~D 345 (378)
..|+.- ...+.+.+.+|+++.|.|...... ..+.+.|+|+.++.+.. +....+.++...+..|.|.+++..|
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~---~~~~~~~~~~~~~~~L~i~~v~~~D 92 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSART---VPGEEETRMWAQDGALWLLPALQED 92 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSC---CSCCSSSCEEEETTEEEESSBCTTC
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcc---cCccccccEEeeCCeEEECCCCccc
Confidence 445532 235678999999999999985111 23346899999875410 2111234566667779999999999
Q ss_pred CeEEEEEeCC---eeeEEEeeeeccc
Q psy10772 346 AGKYDCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 346 sG~Y~C~~~~---~~l~~~~~~v~~~ 368 (378)
+|.|.|.+.+ ..-.+..|.|...
T Consensus 93 ~G~Y~C~~~n~~g~~~~~~~l~V~~~ 118 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDKMSIELRVFEN 118 (339)
T ss_dssp CEEEECCEEETTEEEEEEEEEEEECS
T ss_pred CEEEEEEEECCcceEEEEEEEEEEcC
Confidence 9999999987 3556667777654
No 193
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=97.90 E-value=1.5e-05 Score=76.57 Aligned_cols=123 Identities=14% Similarity=0.143 Sum_probs=75.9
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..+...| .+.|++. +-...|....- ...+... |..- .....+.+.+|+++.|.|...+.+.
T Consensus 276 ~L~i~~~~~~d---~G~Y~C~-a~n~~g~~~~~~~l~V~~~-----p~~~---~~~~~~~v~~g~~~~l~C~~~g~p~-- 341 (404)
T 3p3y_A 276 ALRITNVSEED---SGEYFCL-ASNKMGSIRHTISVRVKAA-----PYWL---DEPKNLILAPGEDGRLVCRANGNPK-- 341 (404)
T ss_dssp EEEESSCCGGG---CEEEEEE-EECSSCEEEEEEEEEEEEE-----EEEE---ECCCCEEECTTCCEEEECEEEEESC--
T ss_pred eEEEccCCHhH---CEEEEEE-EEeCCCcEEEEEEEEEeCC-----Ceee---ccCCcceeecCCcEEEEEEccccCC--
Confidence 35555555444 5788887 34445554321 1111111 0100 1234467888999999999876543
Q ss_pred CCCeEEEEecccCceeeEeec-cCcceEeecCceEEeeecCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 304 NQPMSWYHYSKDKGRYQIKFR-SDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~~-~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|.++|++++.+ |... ...+....+.-|.|.+++.+|+|.|.|.+.| ...++..|.|.+
T Consensus 342 -p~v~W~~~g~~-----~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 342 -PTVQWMVNGEP-----LQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp -CEEEEEETTEE-----GGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred -CceEEEECCEe-----cCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 58999998754 3211 1123444555699999999999999999987 566777777754
No 194
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.90 E-value=3.3e-05 Score=61.71 Aligned_cols=87 Identities=20% Similarity=0.191 Sum_probs=53.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC-cee-----eEee--ccCcceEee--cCceEEeeecCCCCeE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK-GRY-----QIKF--RSDKFIRTV--DGGLVIMAVEELDAGK 348 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~-~~~-----~l~~--~~~~~~~~~--~~GLlI~~v~~~DsG~ 348 (378)
...+.+.+|+++.|+|....+.. .+.|.|+...... ..+ .... .-.+|+... ...|.|.+|+.+|+|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~ 87 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGP--YRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGT 87 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCS--CSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEE
T ss_pred CCCEEEecCCcEEEeCCccCCCC--cCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeE
Confidence 45678999999999998732222 2479998832110 000 0000 011354442 3349999999999999
Q ss_pred EEEEeCCee--eEEEeeeecc
Q psy10772 349 YDCWLGNTV--LCTHNLTVDA 367 (378)
Q Consensus 349 Y~C~~~~~~--l~~~~~~v~~ 367 (378)
|.|...+.. -....|+|.+
T Consensus 88 Y~C~v~~~~~~~~~~~L~V~d 108 (110)
T 2ptt_A 88 YYMRVLRETENELKITLEVFD 108 (110)
T ss_dssp EEEEEESSSBCCEEEEEEEEC
T ss_pred EEEEEEcCCCcEEEEEEEEEc
Confidence 999997632 3356666653
No 195
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=97.89 E-value=3e-05 Score=68.08 Aligned_cols=84 Identities=15% Similarity=0.248 Sum_probs=54.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+ .+.|.|+.+........+... .++|+..... .|.|.+++.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQASQDI---SNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIG 84 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred CCEEEecCCCcEEEEEEeCCCc---CceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCE
Confidence 3467889999999999987653 368999876432221111110 1234333222 4999999999999
Q ss_pred EEEEEeCCee----eEEEeeee
Q psy10772 348 KYDCWLGNTV----LCTHNLTV 365 (378)
Q Consensus 348 ~Y~C~~~~~~----l~~~~~~v 365 (378)
.|.|.+.+.. -....|+|
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 85 SYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp EEEEEECSSSSCEECCCEEEEE
T ss_pred EEEEecccCCceEEcCCceEEE
Confidence 9999997631 23345666
No 196
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.89 E-value=1.1e-05 Score=70.50 Aligned_cols=61 Identities=25% Similarity=0.396 Sum_probs=47.2
Q ss_pred EEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC--ceEEeeecCCCCeEEEEEeCC
Q psy10772 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG--GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~--GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+|+++.|.|....++ |.++|+.++.+ +. .+.++..... -|.|.+++..|+|.|.|.+.|
T Consensus 122 ~~~g~~v~l~C~~~~~p----p~i~W~~~g~~-----l~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 184 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG----ANIQWLFNSQS-----LQ--LTERMTLSQNNSILRIDPIKREDAGEYQCEISN 184 (208)
T ss_dssp CCTTCCEEEEEECSCTT----CEEEEEETTEE-----CC--CCSSEEEETTTTEEEESSCCGGGCEEEEEEEEC
T ss_pred EeeCCCEEEEEECCCCC----CceEEEECCEe-----CC--CCCCeEEcCCCCEEEEeccCHHhCeEEEEEEec
Confidence 67799999999986543 47999997754 33 3444444443 399999999999999999998
No 197
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.89 E-value=3.5e-05 Score=67.76 Aligned_cols=86 Identities=19% Similarity=0.217 Sum_probs=54.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+. +.|.|+.+........+.. ....|+..... .|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVT---SRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTA 83 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCcEEEcCCCCEEEEeeCCCccC---CCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCe
Confidence 35678899999999999865543 5799998643211100100 01234333222 5999999999999
Q ss_pred EEEEEeCCeeeE----EEeeeecc
Q psy10772 348 KYDCWLGNTVLC----THNLTVDA 367 (378)
Q Consensus 348 ~Y~C~~~~~~l~----~~~~~v~~ 367 (378)
.|.|.+.+..-. ...|+|..
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 84 IYFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEEcCCCceeCCCEEEEEcC
Confidence 999999874311 23566654
No 198
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.89 E-value=4e-05 Score=69.27 Aligned_cols=90 Identities=21% Similarity=0.332 Sum_probs=55.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC--CCCCeEEEEecccCceeeEeec-------cCcceEeec-C---ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM--ANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD-G---GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L--a~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~-~---GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|.....+.. ..+.|.|+.+........+... .+.|+.... . -|.|.+|+.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 87 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 87 (247)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHH
Confidence 356789999999999998654310 0257999986532221111100 123444322 2 39999999999
Q ss_pred CeEEEEEeCCee----eEEEeeeeccc
Q psy10772 346 AGKYDCWLGNTV----LCTHNLTVDAH 368 (378)
Q Consensus 346 sG~Y~C~~~~~~----l~~~~~~v~~~ 368 (378)
+|.|.|.+.+.. -....|+|...
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 88 LGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CEEEEEEEccCCccEECCCEEEEEECC
Confidence 999999998742 12345666553
No 199
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.88 E-value=2.9e-05 Score=68.20 Aligned_cols=75 Identities=25% Similarity=0.311 Sum_probs=50.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-----e--ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-----F--RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-----~--~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
...+.+.+|+++.|.|...+.+. +.|+|+.+........+. . ...+|+..... -|.|.+++.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRASQSIG---NNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (213)
T ss_dssp CSEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CccEEEeCCCcEEEEEECCCCCC---CCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCE
Confidence 35678899999999999875543 579999865322110010 0 01134333222 4999999999999
Q ss_pred EEEEEeCCe
Q psy10772 348 KYDCWLGNT 356 (378)
Q Consensus 348 ~Y~C~~~~~ 356 (378)
.|.|.+.+.
T Consensus 85 ~Y~C~~~~~ 93 (213)
T 3d9a_L 85 MYFCQQSNS 93 (213)
T ss_dssp EEEEEECSS
T ss_pred EEEEeeecC
Confidence 999999874
No 200
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=97.88 E-value=1.4e-05 Score=76.95 Aligned_cols=78 Identities=17% Similarity=0.283 Sum_probs=58.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-ecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+.+|+++.|.|...+.+. |.++|++++.. +. .+.++.. .+.-|.|.+++.+|+|.|.|.+.|
T Consensus 320 ~~~~~~~g~~v~l~C~~~g~p~---p~v~W~~~g~~-----~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 389 (403)
T 3laf_A 320 SNLYAYESMDIEFECAVSGKPV---PTVNWMKNGDV-----VI--PSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAG 389 (403)
T ss_dssp CCEECCTTCCEEECCEEEEESC---CEEEEEETTEE-----CC--CSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cceEEecCCeEEEEEEEeeccC---CEEEEEECCEE-----CC--CCCcEEEecCccEEEeccccccCEEEEEEEEcCCc
Confidence 3456778999999999875544 58999998754 32 3343333 344599999999999999999987
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
..-++-.|.|.+
T Consensus 390 ~~~~~~~l~V~~ 401 (403)
T 3laf_A 390 NAQSSAQLIVPK 401 (403)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEEEEeC
Confidence 666777777764
No 201
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=97.88 E-value=2.1e-05 Score=78.31 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=54.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
...+.+.+|+++.|+|.+.+++. +.++|++++..... ......+.+.. ..|.|.+|+.+|+|.|.|.+.|
T Consensus 55 ~~~v~V~~G~~v~L~C~v~g~P~---p~i~W~~~~~~l~~-~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N~~g 127 (423)
T 3qs7_E 55 AAAVEVDVSASITLQVLVDAPGN---ISCLWVFKHSSLNC-QPHFDLQNRGV---VSMVILKMTETQAGEYLLFIQSEAT 127 (423)
T ss_dssp -CEEEECSSCCEEEEEECSCCSS---CEEEEEETTEEECC-CCBC-----CE---EEEEESSCCSSSCSEEEEEEEC--C
T ss_pred cccEEEecCCcEEEEEEEEcCCC---CeEEEEECCCccCc-cceeccccceE---EEEEEeecCcccCEEEEEEEEcCCC
Confidence 34788999999999999876544 67899987643000 00000111211 2489999999999999999988
Q ss_pred eeeEEEeeeec
Q psy10772 356 TVLCTHNLTVD 366 (378)
Q Consensus 356 ~~l~~~~~~v~ 366 (378)
..-....|.|.
T Consensus 128 ~~~~~~~l~V~ 138 (423)
T 3qs7_E 128 NYTILFTVSIR 138 (423)
T ss_dssp EEEEEEEEEEC
T ss_pred cEEEEEEEEEe
Confidence 44456666665
No 202
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.88 E-value=3e-05 Score=64.85 Aligned_cols=75 Identities=17% Similarity=0.224 Sum_probs=50.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee------cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV------DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~------~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...... .+.+.+.|+.+...+....+ ...++|+... .--|.|.+++.+|+|.|.|.
T Consensus 7 p~~v~v~~G~svtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l-i~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~ 84 (126)
T 3moq_A 7 PRTATKETGESLTINCVLRDAS-FELKDTGWYRTKLGSTNEQS-ISIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQ 84 (126)
T ss_dssp CSEEEEETTCCEEEEEEEESCS-SCCCEEEEEEEETTCCCCEE-CCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CceEEEeCCCCEEEEEEeecCc-cCCceEEEEEeCCCCCceEE-EEeCCcEEEEEeCCCCEEEEEECcCChHhCEEEEEE
Confidence 3567889999999999986442 23346999987543221112 1233444332 11399999999999999999
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
..+
T Consensus 85 ~~~ 87 (126)
T 3moq_A 85 AFY 87 (126)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 203
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.87 E-value=2e-05 Score=63.10 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=49.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee------cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV------DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~------~~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...... .+.+.|.|+.+........+ +..++|+... .--|.|.+++.+|+|.|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~-~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 84 (108)
T 2coq_A 7 PRIATKETGESLTINCVLRDTA-CALDSTNWYRTKLGSTKEQT-ISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYKCK 84 (108)
T ss_dssp CSEEEECTTCCEEEEEEECCSS-EEEEEEEEEEEETTCCCEEE-CCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CceEEEcCCCCEEEEeEeCCCc-CCCCEEEEEEcCCCCCcEEE-EEeCCceEEEEcCCCCEEEEEECCCCcccCEEEEEE
Confidence 3457888999999999986432 12247999988532221112 1233444321 12399999999999999999
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
+.+
T Consensus 85 ~~~ 87 (108)
T 2coq_A 85 AYR 87 (108)
T ss_dssp EEE
T ss_pred EEe
Confidence 875
No 204
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=97.87 E-value=5.3e-05 Score=60.33 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=45.9
Q ss_pred eEEEEeCCeeeeeeeeccCCCCC--CCCeEEEEeccc------Cceee---EeeccCcceEee--cCceEEeeecCCCCe
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMA--NQPMSWYHYSKD------KGRYQ---IKFRSDKFIRTV--DGGLVIMAVEELDAG 347 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La--~~~v~W~~~~~~------~~~~~---l~~~~~~~~~~~--~~GLlI~~v~~~DsG 347 (378)
.+.+..|+++.|+|.....+... ...|.|+.++.+ .+... ...+-..|+... +.-|.|.+|+.+|+|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G 82 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKG 82 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCE
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCE
Confidence 56788999999999875332211 013899876432 01000 000011233322 234999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|...+
T Consensus 83 ~Y~C~v~~ 90 (110)
T 1ncn_A 83 LYQCIIHH 90 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 99999876
No 205
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.87 E-value=8.2e-06 Score=72.82 Aligned_cols=61 Identities=23% Similarity=0.322 Sum_probs=44.5
Q ss_pred EeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecCceEEeee-cCCCCeEEEEEeCC
Q psy10772 285 TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDGGLVIMAV-EELDAGKYDCWLGN 355 (378)
Q Consensus 285 ~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v-~~~DsG~Y~C~~~~ 355 (378)
++|+++.|.|.. .+ .|.++|++++.. |....+.+.+ .....|.|.+| +.+|+|.|.|.+.|
T Consensus 126 ~~G~~v~L~C~g--~p---~p~i~W~k~~~~-----l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N 188 (204)
T 1sy6_A 126 ISGTTVILTCPQ--YP---GSEILWQHNDKN-----IGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRG 188 (204)
T ss_dssp EETTEEEEECSC--CC---SSCEEEEETTEE-----ESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETT
T ss_pred ecCCcEEEEcCC--CC---CCceEEEECCEE-----CCCccCCceEecCCCEEEEeeCCccccCEEEEEEecc
Confidence 489999999983 22 257999998754 4311122223 34566999999 99999999999998
No 206
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.87 E-value=5.7e-05 Score=60.96 Aligned_cols=75 Identities=15% Similarity=0.270 Sum_probs=49.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--------c---cCcceEeec----C--ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--------R---SDKFIRTVD----G--GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--------~---~~~~~~~~~----~--GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|............|.|+.+...++...|-. . ..+|+.... . -|.|.+++.
T Consensus 7 ~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~ 86 (116)
T 3bj9_1 7 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 86 (116)
T ss_dssp EEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCCCh
Confidence 4788999999999998643222234799988753322211210 0 123444322 2 499999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|...+
T Consensus 87 ~DsG~Y~C~~~~ 98 (116)
T 3bj9_1 87 EDEAMYYCAMGA 98 (116)
T ss_dssp GGCEEEEEEECC
T ss_pred hHCEEEEEEEeC
Confidence 999999999886
No 207
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.87 E-value=2.6e-05 Score=77.56 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=57.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-cCcceEeec-CceEEeeecCCCCeEEEEEeCC-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-SDKFIRTVD-GGLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-~~~~~~~~~-~GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
...+.+.+|+++.|.|....| .|.++|++++.. .+... .+.++.... ..|.|.+|+.+|+|.|.|.+.|
T Consensus 348 ~~~~~v~~G~~v~L~C~~~~p----~p~i~W~~~~~~----~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 419 (440)
T 3zyj_A 348 PADLNVTEGMAAELKCRASTS----LTSVSWITPNGT----VMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNS 419 (440)
T ss_dssp CCCEEECTTSCCEECCEESST----TSEEEEECTTSC----EEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECS
T ss_pred ccceeeccCceEEEEeecCCC----CCceEEEeCCCc----eeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcC
Confidence 455788899999999998433 358999975432 12111 122444443 4499999999999999999987
Q ss_pred --eeeEEEeeeecccc
Q psy10772 356 --TVLCTHNLTVDAHS 369 (378)
Q Consensus 356 --~~l~~~~~~v~~~~ 369 (378)
..-++-.+.|+...
T Consensus 420 ~G~~~~~~~~~v~~~~ 435 (440)
T 3zyj_A 420 VGNTTASATLNVTGTH 435 (440)
T ss_dssp SCEEEEEEEEEEC---
T ss_pred CCcEEEEEEEEEeccc
Confidence 77788888887654
No 208
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=97.87 E-value=1.2e-05 Score=69.23 Aligned_cols=70 Identities=24% Similarity=0.380 Sum_probs=49.9
Q ss_pred ceeEEEEeCCeeeeeee-eccCCCCCCCCeEEEEecccCceeeEeeccCcc-eEe-ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCF-VKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF-IRT-VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~-~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~-~~~-~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
...+.+.+|+++.|.|. ..+.+. .+.++|++++.+ +....+.+ ... .+..|.|.+++.+|+|.|.|.+.+
T Consensus 15 ~~~~~v~~G~~v~L~C~~~~~~p~--~~~v~W~~~~~~-----~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 15 RPEVRVKEGKGMVLLCDPPYHFPD--DLSYRWLLNEFP-----VFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCEEEETTCCEEECCCCCSEESS--CCEEEEEESSTT-----CBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CceEEEECCCCEEEeccccccCCC--ceEEEEEECCce-----eeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 45678999999999999 543322 157999998765 32112222 222 344599999999999999999986
No 209
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.87 E-value=3.4e-05 Score=66.72 Aligned_cols=76 Identities=20% Similarity=0.435 Sum_probs=48.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c----------cCcceEee-------cCceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R----------SDKFIRTV-------DGGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~----------~~~~~~~~-------~~GLlI~~v 341 (378)
..+++..|+++.|+|...+++....+.|+|+.++.+.....+.. . ...|+... +.-|.|.++
T Consensus 7 ~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v 86 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNA 86 (218)
T ss_dssp SEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSC
T ss_pred CeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeec
Confidence 46889999999999998755442112489998875422211110 0 01122111 123999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.+
T Consensus 87 ~~~D~G~Y~C~~~~ 100 (218)
T 4frw_A 87 VQADEGEYECRVST 100 (218)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred cHHHCCceeEEEEe
Confidence 99999999998765
No 210
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.86 E-value=4.4e-05 Score=68.80 Aligned_cols=74 Identities=15% Similarity=0.133 Sum_probs=48.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec---------c---CcceEeecC-----ceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR---------S---DKFIRTVDG-----GLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~---------~---~~~~~~~~~-----GLlI~~v 341 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+........+... . .+|+....+ .|.|.+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 84 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSLDFQ---ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSA 84 (246)
T ss_dssp CSEEEEETTSCEEEEEEESSSC---CCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSC
T ss_pred CcEEEEeCCCcEEEEeEecCCC---ceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCC
Confidence 3467889999999999876543 368999885322211111100 0 134443321 3999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.+
T Consensus 85 ~~~D~G~Y~C~~~~ 98 (246)
T 4dzb_B 85 HPEDSSFYICSART 98 (246)
T ss_dssp CGGGCEEEEEEECC
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999985
No 211
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.86 E-value=3.5e-05 Score=71.72 Aligned_cols=130 Identities=18% Similarity=0.150 Sum_probs=76.1
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEece--e--eeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVR--L--LQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPA 300 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~~~--~--lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~ 300 (378)
.+.+..+...| .+.|++..--...|....+... + ........|.+-. .....+.+.+|+++.|.|...+.+
T Consensus 163 ~L~i~~v~~~d---~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~--~~~~~~~~~~g~~v~l~C~~~g~P 237 (315)
T 1itb_B 163 RLIVMNVAEKH---RGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS--PANETMEVDLGSQIQLICNVTGQL 237 (315)
T ss_dssp EEEESSCCGGG---CEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS--CCSEEEECCSSSCEEEEEEEEECT
T ss_pred eEEEEeceehh---CcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec--CCCCcEEEeCCCcEEEEEEEecCC
Confidence 34454554444 5789988442566766433211 1 1111011121111 112236788999999999997654
Q ss_pred CCCCCCeEEEEecccCceeeEeecc----CcceE----------eecCceEEeeecCCC-CeEEEEEeCC---eeeEEEe
Q psy10772 301 SMANQPMSWYHYSKDKGRYQIKFRS----DKFIR----------TVDGGLVIMAVEELD-AGKYDCWLGN---TVLCTHN 362 (378)
Q Consensus 301 ~La~~~v~W~~~~~~~~~~~l~~~~----~~~~~----------~~~~GLlI~~v~~~D-sG~Y~C~~~~---~~l~~~~ 362 (378)
. |.++|++++.+ |.... ++++. ....-|.|.+++..| +|.|.|.+.| ..-++..
T Consensus 238 ~---p~i~W~~~g~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~ 309 (315)
T 1itb_B 238 S---DIAYWKWNGSV-----IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 309 (315)
T ss_dssp T---SEEEEEETTEE-----CCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEE
T ss_pred C---CeeEEEECCEE-----CCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEE
Confidence 4 68999998754 21000 11111 122369999999999 9999999988 5566777
Q ss_pred eeecc
Q psy10772 363 LTVDA 367 (378)
Q Consensus 363 ~~v~~ 367 (378)
|.|.+
T Consensus 310 l~v~~ 314 (315)
T 1itb_B 310 LIYPV 314 (315)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 76643
No 212
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.86 E-value=2.9e-05 Score=68.67 Aligned_cols=88 Identities=22% Similarity=0.286 Sum_probs=57.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe---ecc---CcceE----------eec-CceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK---FRS---DKFIR----------TVD-GGLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~---~~~---~~~~~----------~~~-~GLlI~~v 341 (378)
...+.+.+|+++.|.|.....+. .+.|+|+.++....+..+. ... ..++. ... ..|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v 84 (231)
T 2pet_A 7 PPLVEVMRGKSVILDCTPTGTHD--HYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEA 84 (231)
T ss_dssp CSEEEEETTCCEEECCCCBSCCS--EEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSC
T ss_pred CCcEEEEcCCCEEEecccCCCCC--ceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEccc
Confidence 45678999999999999876543 2479999876541100011 000 12222 233 34999999
Q ss_pred cCCCCeEEEEEeCC----eeeEEEeeeeccc
Q psy10772 342 EELDAGKYDCWLGN----TVLCTHNLTVDAH 368 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~----~~l~~~~~~v~~~ 368 (378)
+.+|+|.|.|.+.+ ..-....|.|...
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 115 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAK 115 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBC
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEec
Confidence 99999999999765 3455666777654
No 213
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=97.86 E-value=3.2e-05 Score=70.89 Aligned_cols=80 Identities=23% Similarity=0.332 Sum_probs=56.5
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE-ecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH-YSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCW 352 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~-~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~ 352 (378)
....+.+.+|+++.|.|...+.+. .++|+. ++.. +. .+.++....+| |.|.+++..|+|.|.|.
T Consensus 10 ~~~~~~v~~G~~v~l~C~~~~~p~----~v~W~~~~g~~-----~~--~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (291)
T 2wim_A 10 SLSKVELSVGESKFFTCTAIGEPE----SIDWYNPQGEK-----II--STQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 78 (291)
T ss_dssp SCSEEEEETTCCEEEEEEEESCCS----EEECBCTTCCB-----CC--CBTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred eccceEecCCCcEEEEEEEeCCCC----ceEEECCCCcC-----cc--CCCcEEEecCCCEEEEEEccCCcccCEEEEEE
Confidence 346678999999999999875432 799987 3332 32 33444444444 99999999999999999
Q ss_pred eCCe----eeEEEeeeeccc
Q psy10772 353 LGNT----VLCTHNLTVDAH 368 (378)
Q Consensus 353 ~~~~----~l~~~~~~v~~~ 368 (378)
+.+. .-....|.|...
T Consensus 79 ~~n~~g~~~~~~~~l~v~~~ 98 (291)
T 2wim_A 79 ATDAKGQTQEATVVLEIYQK 98 (291)
T ss_dssp EECSSSCEEEEEEEEEEECC
T ss_pred EecccCceEEEEEEEEecCC
Confidence 9762 235566666544
No 214
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.86 E-value=6.8e-05 Score=68.41 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=48.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc----------Cc-ceEeecCc---eEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS----------DK-FIRTVDGG---LVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~----------~~-~~~~~~~G---LlI~~v~~~ 344 (378)
.+.+.+.+|+++.|+|..... +.+.|.|+.+....+...+.... .+ |+.....+ |.|.+|+.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~---~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~ 84 (253)
T 3to4_D 8 PRWRLVPRGQAVNLRCILKNS---QYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMS 84 (253)
T ss_dssp CSEEEEESSCCEEEEEECSCT---TCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCS
T ss_pred CCeEEEeCCCcEEEEEEeCCC---CcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChh
Confidence 346789999999999975432 33589998864332221111100 11 44444444 999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|.+.+
T Consensus 85 DsG~Y~C~~~~ 95 (253)
T 3to4_D 85 QGRTLYCTSSA 95 (253)
T ss_dssp SCEEEEEEEEC
T ss_pred hCeEEEEEEec
Confidence 99999999863
No 215
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=97.86 E-value=4.1e-05 Score=62.55 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=56.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCce------eeEeeccCcceEee-cCceEEeeecCCCCeEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR------YQIKFRSDKFIRTV-DGGLVIMAVEELDAGKYDC 351 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~------~~l~~~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C 351 (378)
...+.+.+|+++.|+|....+ ......|.|+.+...... ..+..+-.+|+... +..|.|.+|+.+|+|.|.|
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C 88 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSST-TAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFC 88 (117)
T ss_dssp SCCEEEETTCCEEECEEEESC-CCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEE
T ss_pred cCCEEEecCCCEEEEEEecCC-CCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEE
Confidence 456789999999999998653 222236899876421000 00100113354433 3459999999999999999
Q ss_pred EeC----CeeeEEEeeeeccc
Q psy10772 352 WLG----NTVLCTHNLTVDAH 368 (378)
Q Consensus 352 ~~~----~~~l~~~~~~v~~~ 368 (378)
... ...-+...|+|...
T Consensus 89 ~v~~~~~g~~~~~~~L~V~~p 109 (117)
T 3q0h_A 89 IYHTYPDGTYTGRIFLEVLES 109 (117)
T ss_dssp EEEEETTCCEEEEEEEEEECC
T ss_pred EEEECCCCCeEEEEEEEEEcc
Confidence 863 24456778888754
No 216
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=97.85 E-value=8.3e-05 Score=70.35 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=74.2
Q ss_pred EEEEEEEeeeecCCCeEEEEEEECCCeeEEE-EeceeeeeccCCCCCccccc--ccceeEEEEeCCeeeeeeeeccC--C
Q psy10772 226 LVVDVVQYEVFGTTSEYIVYFAATTTLRTVF-VKVRLLQDVSNTSDSICESS--VGRLKQTVTWGQSVHLSCFVKLP--A 300 (378)
Q Consensus 226 IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~-V~~~~lqd~~~~~~~~C~~~--~~~k~~~~~~G~s~~L~C~~r~~--~ 300 (378)
+.+..++..| .+.|++. +....|.... +...+... ..+... .......+.+|+++.|.|..... .
T Consensus 81 L~i~~~~~~D---~G~Y~C~-a~n~~~~~~~~~~l~V~~~------~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 150 (349)
T 4dep_C 81 LWFRPTLLND---TGNYTCM-LRNTTYCSKVAFPLEVVQK------DSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFP 150 (349)
T ss_dssp EEESSCCGGG---CEEEEEE-EECSSCEEEEEEEEEEECC------CTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSC
T ss_pred EEEccCChhh---CEEEEEE-EecCCceEEEEEEEEEecC------CcccCcccccCcceeeecCccEEEEcCCCccccc
Confidence 3444444444 5889987 4445554431 22222221 122211 12345678889999999963111 1
Q ss_pred CCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCee-------eEEEeeeecc
Q psy10772 301 SMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV-------LCTHNLTVDA 367 (378)
Q Consensus 301 ~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~-------l~~~~~~v~~ 367 (378)
.-+.|.++|+.++.+ |. ...++...+..|.|.+++.+|+|.|.|.+.|.. -+...|.|..
T Consensus 151 g~p~~~v~W~k~~~~-----l~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 151 SSVKPTITWYMGCYK-----IQ--NFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVG 217 (349)
T ss_dssp TTSCCEEEEEETTEE-----CC--SCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred CCCCceEEEeeCCEE-----CC--CccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEc
Confidence 223368999988754 42 224445555569999999999999999998732 4566666654
No 217
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=97.85 E-value=1.7e-05 Score=79.26 Aligned_cols=84 Identities=18% Similarity=0.272 Sum_probs=57.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-cCcceEeec-CceEEeeecCCCCeEEEEEeCC-
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-SDKFIRTVD-GGLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-~~~~~~~~~-~GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
.+.+.+.+|+++.|.|... |.|.|+|+.++.. .+... .+.++.... ..|.|.+|+.+|+|.|.|.+.|
T Consensus 359 ~~~~~v~~G~~~~l~C~~~-----p~p~i~W~~~~~~----~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~ 429 (452)
T 3zyi_A 359 PRDLNISEGRMAELKCRTP-----PMSSVKWLLPNGT----VLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNV 429 (452)
T ss_dssp CCCEECCTTSCCEECCBCC-----TTSEEEEECTTSC----EECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECS
T ss_pred cccccccCCCEEEEEEeCC-----CCCcEEEEeCCCc----EeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcC
Confidence 4557889999999999985 3468999875432 12111 122444444 4499999999999999999988
Q ss_pred --eeeEEEeeeecccccC
Q psy10772 356 --TVLCTHNLTVDAHSNV 371 (378)
Q Consensus 356 --~~l~~~~~~v~~~~c~ 371 (378)
..-++..|.|.+.+=.
T Consensus 430 ~G~~~~~~~l~v~~~~~~ 447 (452)
T 3zyi_A 430 AGNSNASAYLNVSTAGTH 447 (452)
T ss_dssp SCEEEEEEEEEC------
T ss_pred CCcEEEEEEEEEEccccc
Confidence 7788888988876543
No 218
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.85 E-value=5.5e-05 Score=66.19 Aligned_cols=87 Identities=23% Similarity=0.255 Sum_probs=55.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC-cee----eE-eeccC--cceEe-ecCc-eEEeeecCCCCeE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK-GRY----QI-KFRSD--KFIRT-VDGG-LVIMAVEELDAGK 348 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~-~~~----~l-~~~~~--~~~~~-~~~G-LlI~~v~~~DsG~ 348 (378)
.+.+.+.+|+++.|.|....+.. .+.|.|++.+... ..+ .. ....+ +|+.. ..+| |.|.+|+.+|+|.
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~--~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLAS--YQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCS--CSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCc--eeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeE
Confidence 45788999999999998743322 3579998842110 000 00 00011 35444 3444 9999999999999
Q ss_pred EEEEeCC--eeeEEEeeeecc
Q psy10772 349 YDCWLGN--TVLCTHNLTVDA 367 (378)
Q Consensus 349 Y~C~~~~--~~l~~~~~~v~~ 367 (378)
|.|...+ ..-..+.|.|.+
T Consensus 84 Y~C~v~~~~~~~~~~~L~V~~ 104 (180)
T 2dru_A 84 YYMRMLHETEDQWKITMEVYE 104 (180)
T ss_dssp EEEEEESSSEEEEEEEEEEEC
T ss_pred EEEEEEcCCeEEEEEEEEEEC
Confidence 9999654 345667788765
No 219
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.85 E-value=3e-05 Score=67.82 Aligned_cols=67 Identities=22% Similarity=0.386 Sum_probs=48.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEee-ecCCCCeEEEEEeCCe---e
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA-VEELDAGKYDCWLGNT---V 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~-v~~~DsG~Y~C~~~~~---~ 357 (378)
.....|+++.|.|...++ ++|+|+.++.+ |. .+ .+.-|.|.+ ++.+|+|.|.|.+.|. .
T Consensus 9 ~v~~~G~~v~L~C~~~~~-----~~i~W~k~g~~-----l~--~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~ 71 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDSD-----ENLKWEKNGQE-----LP--QK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNT 71 (186)
T ss_dssp EEEEETTEEEEECSSCCC-----TTCEEEETTEE-----EC--SC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCC
T ss_pred EEEeCCcEEEEEEeCCCC-----CceEEEECCEE-----CC--CC-----CCCEEEECCCCccccCEEEEEEEEeCCCcE
Confidence 345789999999998541 35999988754 53 21 234599999 9999999999999873 3
Q ss_pred eEEEeeee
Q psy10772 358 LCTHNLTV 365 (378)
Q Consensus 358 l~~~~~~v 365 (378)
.....+.|
T Consensus 72 ~~~~~~~v 79 (186)
T 1jbj_A 72 YLYLKARV 79 (186)
T ss_dssp CEEECCCC
T ss_pred EEEEEEEE
Confidence 34444444
No 220
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.85 E-value=4.1e-05 Score=69.44 Aligned_cols=86 Identities=23% Similarity=0.234 Sum_probs=54.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-cC---ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DG---GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~---GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+. +.|.|+.+........+.. ..+.|+... .+ .|.|.+|+.+|+|
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRASQSIG---NNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (242)
T ss_dssp CSEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEEEcCCCcEEEEEEeCCCCC---ceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCE
Confidence 35578899999999999865543 5899988753221111110 012344432 12 3999999999999
Q ss_pred EEEEEeCCee----eEEEeeeecc
Q psy10772 348 KYDCWLGNTV----LCTHNLTVDA 367 (378)
Q Consensus 348 ~Y~C~~~~~~----l~~~~~~v~~ 367 (378)
.|.|.+.+.. -....|.|..
T Consensus 85 ~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 85 MYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEEeEecCCceEECCCEEEEEcC
Confidence 9999998741 1234566654
No 221
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.85 E-value=5.6e-05 Score=61.12 Aligned_cols=75 Identities=24% Similarity=0.291 Sum_probs=49.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEee---cC---ceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTV---DG---GLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~---~~---GLlI~~v~ 342 (378)
.+.+.+.+|+++.|.|..... .....|.|+.+....+..-|.. ...+|+... .. -|.|.+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~--~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 84 (116)
T 1tvd_A 7 SPDQTVASGSEVVLLCTYDTV--YSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPVR 84 (116)
T ss_dssp SCCEEEETTCCEEECCEEECC--SSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSCC
T ss_pred CCcEEEecCCeEEEEeEeEcC--CCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccCC
Confidence 356788999999999997532 1234799988753322211210 013454433 22 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 85 ~~DsG~Y~C~~~~ 97 (116)
T 1tvd_A 85 TEDSATYYCAFTL 97 (116)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hHHCEEEEEEEeC
Confidence 9999999999875
No 222
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.85 E-value=6.2e-05 Score=66.07 Aligned_cols=83 Identities=22% Similarity=0.266 Sum_probs=53.2
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee-cC---ceEEeeecCCCCeEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV-DG---GLVIMAVEELDAGKY 349 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~-~~---GLlI~~v~~~DsG~Y 349 (378)
.+.+.+|+++.|.|... +.+.|.|+.+........+... ..+|+... .. -|.|.+|+.+|+|.|
T Consensus 9 ~~~v~~G~~v~L~C~~~-----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 83 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT-----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVY 83 (211)
T ss_dssp EEEECTTCEEEEEEECC-----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred eEEEcCCCCEEEEEEEC-----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEE
Confidence 67888999999999986 2358999986422211111100 12233322 11 399999999999999
Q ss_pred EEEeCCe-----eeEEEeeeeccc
Q psy10772 350 DCWLGNT-----VLCTHNLTVDAH 368 (378)
Q Consensus 350 ~C~~~~~-----~l~~~~~~v~~~ 368 (378)
.|.+.+. .-....|+|...
T Consensus 84 ~C~~~~~~~~~~~~~~~~l~V~~~ 107 (211)
T 3tv3_L 84 YCGSLVGNWDVIFGGGTKLTVLGQ 107 (211)
T ss_dssp EEEEEETTTEEEECCCEEEEECCS
T ss_pred EEEEecCCCceeECCCceEEEeCC
Confidence 9999862 223456777643
No 223
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=97.85 E-value=2e-05 Score=64.89 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=56.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc------CceeeEe-eccCcceEee-c-CceEEeeecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD------KGRYQIK-FRSDKFIRTV-D-GGLVIMAVEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~------~~~~~l~-~~~~~~~~~~-~-~GLlI~~v~~~DsG~Y 349 (378)
...+.+.+|+++.|.|....+... ..+.|+++... .+..... .+-.+|+... . ..|.|.+++.+|+|.|
T Consensus 11 ~~pv~~~~G~~VtL~c~~~~~~~~--~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y 88 (121)
T 2edo_A 11 LVHMTVVSGSNVTLNISESLPENY--KQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTY 88 (121)
T ss_dssp CBCCEEETTSCEEECCSSCCCSSE--EEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEE
T ss_pred cEEEEEEeCCCEEEeCCCCCCCce--eEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEE
Confidence 345789999999999986323221 36899998631 0000000 0012243332 2 3599999999999999
Q ss_pred EEEeCC----eeeEEEeeeeccc
Q psy10772 350 DCWLGN----TVLCTHNLTVDAH 368 (378)
Q Consensus 350 ~C~~~~----~~l~~~~~~v~~~ 368 (378)
.|...+ .....+.|+|.+.
T Consensus 89 ~c~v~~~~~~~~~~~~~L~V~~~ 111 (121)
T 2edo_A 89 IMRVLKKTGNEQEWKIKLQVLDP 111 (121)
T ss_dssp EEEEEETTTEEEECCEECEEECC
T ss_pred EEEEEcCCCcEEEEEEEEEEECC
Confidence 999863 3456788888763
No 224
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.84 E-value=4.5e-05 Score=68.91 Aligned_cols=74 Identities=22% Similarity=0.362 Sum_probs=50.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+. +.+.|+.+........+.. ...+|+..... -|.|.+++.+|+|
T Consensus 11 p~~~~v~~G~~v~L~C~~~~~~~---~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 87 (250)
T 3esu_F 11 TSSLSASLGDRVTISCRASQDIR---NYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIG 87 (250)
T ss_dssp CSEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCEEEeeCCCcEEEEEEecccCC---ceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCE
Confidence 45678899999999999865433 5899998753222111110 01234433222 3999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 88 ~Y~C~~~n 95 (250)
T 3esu_F 88 TYFCQQGN 95 (250)
T ss_dssp EEEEEECS
T ss_pred EEEEEEee
Confidence 99999986
No 225
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.84 E-value=8.3e-05 Score=66.21 Aligned_cols=123 Identities=13% Similarity=0.149 Sum_probs=66.9
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMAN 304 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~ 304 (378)
.+.+..++..| .+.|.+. +....|..... ..+.... . .........+.+|+.+.|.|...+. -+.
T Consensus 84 ~L~I~~v~~~D---~G~Y~C~-a~n~~~~~~~~-v~~~~~~---~-----~~~~~~~~~~~~g~~v~l~c~~~g~--~P~ 148 (226)
T 4f80_A 84 ALRIHNVTASD---SGKYLCY-FQDGDFYEKAL-VELKVAA---L-----GSDLHVDVKGYKDGGIHLECRSTGW--YPQ 148 (226)
T ss_dssp EEEESSCCGGG---CEEEEEE-EEETTEEEEEE-EEEEEEB---C-----CCCCEEEEEEEETTEEEEEEEEEEE--BSC
T ss_pred EEEEeeCchHH---CeeEEEE-EECCCcEEEEE-EEEeecc---c-----eecccceeeeccCCceeeEEEeccC--CCC
Confidence 34455555555 6889887 34455543211 1111110 0 0012345677889999999998652 123
Q ss_pred CCeEEEEecccCceeeEeeccCcceEeecCce----EEeeecCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 305 QPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGL----VIMAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 305 ~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GL----lI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
|.|+|+.++.+. +. .....+...++|+ .+..|+.+|+|.|.|.+.| ..-++..|.|.+
T Consensus 149 p~i~W~k~~~~~----~~-~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 149 PQIQWSNNKGEN----IP-TVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CEEEEECTTSCB----CC-CEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred CEEEEEECCceE----cC-CCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 689998754320 21 1122334445664 3567899999999999987 334566666644
No 226
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.84 E-value=4e-05 Score=69.62 Aligned_cols=78 Identities=19% Similarity=0.325 Sum_probs=50.7
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--c---------cCcceEeec------CceEEee
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--R---------SDKFIRTVD------GGLVIMA 340 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--~---------~~~~~~~~~------~GLlI~~ 340 (378)
....+.+.+|+++.|.|....+...+.+.|.|+.++.......+.. . -..|+.... .-|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 4566889999999999998633333335799998764321111100 0 013333222 4599999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
|+.+|+|.|.|.+.+
T Consensus 91 v~~~D~G~Y~C~~~~ 105 (268)
T 3mj6_A 91 VQKADEGIYTCEIRL 105 (268)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCHhHCEEEEEEEEe
Confidence 999999999999964
No 227
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=97.83 E-value=2.1e-05 Score=72.96 Aligned_cols=78 Identities=24% Similarity=0.260 Sum_probs=53.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe--ecCceEEeeecCCCCeEEEEEeCC--
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT--VDGGLVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~--~~~GLlI~~v~~~DsG~Y~C~~~~-- 355 (378)
..+.+.+|+++.|.|...... +.+.++|+.++.. |. .+.++.. ....|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~~~~v~~G~~v~l~C~~~~~~--p~~~v~W~~~~~~-----~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 84 (317)
T 2y25_A 14 LSWEVTGECNVLLKCKVANIK--KETHIVWYKDERE-----IS--VDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDR 84 (317)
T ss_dssp EEEEEETTTEEEEEEEEESCC--TTCEEEEEETTEE-----EC--CSCC-----CCEEEEETTCCSTTCSCEEEEEESSS
T ss_pred eeEEECCCCeEEEEEEEcCCC--CCCEEEEEECCeE-----cC--CCCcEEEECCeEEEEEccCCcccCeEEEEEEECCC
Confidence 347889999999999986541 2258999988754 43 2333222 223699999999999999999976
Q ss_pred -eeeEEEeeeec
Q psy10772 356 -TVLCTHNLTVD 366 (378)
Q Consensus 356 -~~l~~~~~~v~ 366 (378)
....+..|.|.
T Consensus 85 g~~~~~~~l~v~ 96 (317)
T 2y25_A 85 GKDKSRLKLVDE 96 (317)
T ss_dssp CEEEEEECCSTH
T ss_pred CcEEEEEEEEEe
Confidence 44455555554
No 228
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.83 E-value=3.8e-05 Score=69.32 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=49.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec---------cCcceEeecC-----ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR---------SDKFIRTVDG-----GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~---------~~~~~~~~~~-----GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|+|...+.+. +.|.|+.+........+... ..+|+....+ .|.|.+|+.+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 8 PATLVQPVGSPLSLECTVEGTSN---PNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp CSEEEEETTCCEEEEEEEESCSS---CEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred CceEEecCCCCEEEEEEecCCCC---ceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 45678899999999999875333 58999985432221111100 1123333221 3999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|.+.+
T Consensus 85 D~G~Y~C~~~~ 95 (245)
T 3nfj_J 85 DSGFYLCAWSV 95 (245)
T ss_dssp GCEEEEEEEEC
T ss_pred hCEEEEEEEee
Confidence 99999999976
No 229
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=97.82 E-value=0.00012 Score=70.15 Aligned_cols=123 Identities=18% Similarity=0.198 Sum_probs=74.3
Q ss_pred eEEEEEEEEeeeecCCCeEEEEEEECCCeeEEE-EeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCC
Q psy10772 224 THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVF-VKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302 (378)
Q Consensus 224 T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~-V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~L 302 (378)
..+.+..++..| .+.|.+. +-...|.... +...+... |. .. .....+.+.+|+++.|.|...+.+.
T Consensus 63 ~~L~i~~v~~~D---~G~Y~C~-a~n~~g~~~~~~~l~V~~~-----P~-~~--~~~~~~~~~~g~~~~l~C~~~g~p~- 129 (389)
T 2jll_A 63 SSLHIKDVKLSD---SGRYDCE-AASRIGGHQKSMYLDIEYA-----PK-FI--SNQTIYYSWEGNPINISCDVKSNPP- 129 (389)
T ss_dssp EEEEEESCCGGG---CEEEEEE-EECSSCEEEEEEEEEEEEE-----EE-EC--CSCCEEEECTTCCEEEEECEEEESC-
T ss_pred ceEEEcccChhh---CEEEEEE-EEeCCCCcceEEEEEEEeC-----CE-Ee--cCcceEEeccCCEEEEEEEEEecCC-
Confidence 355666665555 5789988 4445565431 11111111 01 10 1223356788999999999876553
Q ss_pred CCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCC---eeeEEEeeeec
Q psy10772 303 ANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGN---TVLCTHNLTVD 366 (378)
Q Consensus 303 a~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~ 366 (378)
+.++|+.++.+ |......++.....| |.|.+++..|+|.|.|.+.| ....+..|.|.
T Consensus 130 --~~i~W~~~g~~-----l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 130 --ASIHWRRDKLV-----LPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALA 193 (389)
T ss_dssp --CEEEEEETTEE-----SSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred --CeEEEEECCcc-----CCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEec
Confidence 68999998754 321112233333232 99999999999999999987 44455555553
No 230
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=6.4e-05 Score=62.51 Aligned_cols=88 Identities=24% Similarity=0.349 Sum_probs=56.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccC---cceEe---------ecCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD---KFIRT---------VDGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~---~~~~~---------~~~GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|...... +.+.|.|+.+... ...-+....+ .|+.. ..--|.|.+|+.+|+
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~~--~~~~v~W~r~~~~-~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 91 (136)
T 2d9c_A 15 EKSVSVAAGESATLRCAMTSLI--PVGPIMWFRGAGA-GRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA 91 (136)
T ss_dssp CSEEEEETTSCEEECCEESCCC--SCCCCEEEETTTS-SCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTTC
T ss_pred CcEEEEcCCCCEEEEEEEcCCC--CCceEEEEeecCC-CeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHHC
Confidence 4568899999999999986431 2347999987522 1111211111 12211 123499999999999
Q ss_pred eEEEEEeCCe------ee---EEEeeeecccc
Q psy10772 347 GKYDCWLGNT------VL---CTHNLTVDAHS 369 (378)
Q Consensus 347 G~Y~C~~~~~------~l---~~~~~~v~~~~ 369 (378)
|.|.|.+.+. .+ ..-.|+|.+..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~ 123 (136)
T 2d9c_A 92 GTYYCVKFRKGSPDDVEFKSGAGTELSVRAKP 123 (136)
T ss_dssp EEEEEEEEECCSSSCEEEEECCCEEEEEECCC
T ss_pred EEEEEEEEeCCCCcccceeeCCCeEEEEEeCC
Confidence 9999997642 12 35678887654
No 231
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=97.82 E-value=2.9e-05 Score=79.64 Aligned_cols=79 Identities=23% Similarity=0.414 Sum_probs=55.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-ec---CceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-VD---GGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-~~---~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+.+.+.+|+++.|.|...+.+. |.|+|+.++.+ |. .+.++.. .. .-|.|.+++.+|+|.|.|.+.
T Consensus 12 ~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~k~g~~-----l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (570)
T 3b43_A 12 LEHVEAAIGEPITLQCKVDGTPE---IRIAWYKEHTK-----LR--SAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAE 81 (570)
T ss_dssp CCCEEECTTSCEEEEEEEESSSS---CEEEEECSSSB-----CC--CCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCceEEcCCCEEEEEEEEccCCC---CEEEEEECCEE-----cc--CCCCEEEEEECCEEEEEEccCChhhCEEEEEEEE
Confidence 34577889999999999976544 68999998764 43 2222222 12 239999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ....+-.|.|..
T Consensus 82 N~~g~~~~~~~l~v~~ 97 (570)
T 3b43_A 82 NSVGAVASSAVLVIKE 97 (570)
T ss_dssp ETTEEEEEEEEEEECC
T ss_pred eCCceEEEEEEEEECC
Confidence 7 334455555543
No 232
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=97.82 E-value=4.1e-05 Score=65.73 Aligned_cols=81 Identities=22% Similarity=0.342 Sum_probs=55.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE-ecccCceeeEeeccCcceEee-----cCceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH-YSKDKGRYQIKFRSDKFIRTV-----DGGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~-~~~~~~~~~l~~~~~~~~~~~-----~~GLlI~~v~~~DsG~Y~C~ 352 (378)
...+.+.+|+++.|.|...+.+ +.+.++|+. ++.. +.. .+.++... ...|.|.+++..|+|.|.|.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~--~~~~v~W~~~~g~~-----~~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 9 PSQGEISVGESKFFLCQVAGDA--KDKDISWFSPNGEK-----LSP-NQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp SSSEEEETTCCEEEEEEECCCS--CCCEEEEECTTSCE-----ECC-BSSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCcEEcCCCCEEEEEECCCCC--CCceEEEEeCCCcc-----ccC-CCCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 4557789999999999987643 235899998 5543 321 22333322 23599999999999999999
Q ss_pred eCCe----eeEEEeeeecc
Q psy10772 353 LGNT----VLCTHNLTVDA 367 (378)
Q Consensus 353 ~~~~----~l~~~~~~v~~ 367 (378)
+.+. .-+...|.|..
T Consensus 81 ~~~~~~~~~~~~~~l~v~~ 99 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIFQ 99 (191)
T ss_dssp EEETTTEEEEEEEEEEEEC
T ss_pred EEcCCCcceEEEEEEEeec
Confidence 8863 33455555543
No 233
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.81 E-value=2.5e-05 Score=69.50 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=53.5
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC----ee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN----TV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~----~~ 357 (378)
..+.+|+++.|.|.....+. .+.++|+.++.. +. .......|.|.+++.+|+|.|.|.+.| ..
T Consensus 98 ~~v~~G~~v~L~C~~~~~~p--~~~v~W~k~g~~-----~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~ 164 (204)
T 3sgj_C 98 WVFKEEDPIHLRCHSWKNTA--LHKVTYLQNGKG-----RK------YFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVS 164 (204)
T ss_dssp SEEETTCCEEEEEEEGGGCC--CEEEEEEETTEE-----EE------EEEECCCEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred eeEeCCCcEEEEEEecCCCC--CceEEEEECCcE-----ee------cccCCceEEECcCCcccCEEEEEEEEeCCCcee
Confidence 46778999999999854311 247999987754 42 122356799999999999999999987 34
Q ss_pred eEEEeeeecccc
Q psy10772 358 LCTHNLTVDAHS 369 (378)
Q Consensus 358 l~~~~~~v~~~~ 369 (378)
-+...|.|.+..
T Consensus 165 s~~~~l~V~~~~ 176 (204)
T 3sgj_C 165 SETVQITITQGL 176 (204)
T ss_dssp CCCEEEEEEC--
T ss_pred cCcEEEEEeCcC
Confidence 455667776543
No 234
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.81 E-value=0.00012 Score=67.00 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=57.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEeecC-----ceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTVDG-----GLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~~~-----GLlI~~v~~ 343 (378)
...+.+.+|+++.|.|..... .+.+.|+.+........+.. ...+|+..... -|.|.+|+.
T Consensus 144 p~~~~v~~G~~v~L~C~~~~~----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 219 (256)
T 3tf7_C 144 PRNKVTVTGENVTLSCRQTNS----HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASP 219 (256)
T ss_dssp CSEEEEETTCCEEECEEECSC----CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCG
T ss_pred CCEEEEeCCCcEEEEEEcCCC----ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCH
Confidence 345677899999999998643 24799988643322111110 01223333222 399999999
Q ss_pred CCCeEEEEEeCCe-----eeEEEeeeecccccCCCC
Q psy10772 344 LDAGKYDCWLGNT-----VLCTHNLTVDAHSNVADA 374 (378)
Q Consensus 344 ~DsG~Y~C~~~~~-----~l~~~~~~v~~~~c~~~~ 374 (378)
+|+|.|.|.+.|. -=..=.|+|.+.++..++
T Consensus 220 ~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~~~~~~~~ 255 (256)
T 3tf7_C 220 SQTSLYFCASSDAPGQLYFGEGSKLTVLELEHHHHH 255 (256)
T ss_dssp GGCEEEEEEEEEETTEEEECCCEEEEEECGGGGCCC
T ss_pred HHCEEEEEEecCCCCccEECCCeEEEEEccccCccC
Confidence 9999999999652 111234677777776654
No 235
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.81 E-value=5.4e-05 Score=64.99 Aligned_cols=74 Identities=18% Similarity=0.188 Sum_probs=50.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec----CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD----GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~----~GLlI~~v~~~DsG 347 (378)
.+.+++.+|+++.|.|.....+ .+.|.|+.+...++...|-.. ..+|+.... --|.|.+|+.+|+|
T Consensus 23 p~~v~v~~G~sVtL~C~~s~~~---~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~~DsG 99 (146)
T 2yc1_B 23 PATLSVSPGERATLSCRASQSV---RSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEPEDFA 99 (146)
T ss_dssp CSEEEECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred CCEEEEecCCCEEEEEEECCCC---CCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCHHHCE
Confidence 4567899999999999986443 247999987543222112110 123444321 13999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 100 ~Y~C~~~~ 107 (146)
T 2yc1_B 100 IYYCQQYR 107 (146)
T ss_dssp EEEEEECS
T ss_pred EEEEEEec
Confidence 99999986
No 236
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.81 E-value=3.2e-05 Score=66.34 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=51.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe----e
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT----V 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~----~ 357 (378)
..+.+|+++.|.|...+.+. .+.++|+.++.+ +. ......-|.|.+++.+|+|.|.|.+.|. .
T Consensus 98 ~~~~~g~~~~l~C~~~~~~~--~~~~~W~k~g~~-----~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 164 (175)
T 1fnl_A 98 WVFKEEDPIHLRCHSWKNTA--LHKVTYLQNGKD-----RK------YFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVS 164 (175)
T ss_dssp SEEETTCCEEEEEEECTTCC--CEEEEEEETTEE-----EE------EEEECCCEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceecCCCCEEEEEEcCCCCC--ceEEEEEECCeE-----cc------CCCCCCEEEEcccChhhCeEEEEEEEcCCCCcc
Confidence 45778999999998754322 247999987754 43 1223567999999999999999999872 3
Q ss_pred eEEEeeeec
Q psy10772 358 LCTHNLTVD 366 (378)
Q Consensus 358 l~~~~~~v~ 366 (378)
-....|+|.
T Consensus 165 s~~~~l~V~ 173 (175)
T 1fnl_A 165 SETVNITIT 173 (175)
T ss_dssp CCCEEEEEE
T ss_pred CccEEEEEe
Confidence 334455554
No 237
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.81 E-value=4.6e-05 Score=72.64 Aligned_cols=88 Identities=25% Similarity=0.321 Sum_probs=62.2
Q ss_pred ccccc-ccceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEE
Q psy10772 272 ICESS-VGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350 (378)
Q Consensus 272 ~C~~~-~~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~ 350 (378)
.|... .....+.+..|+++.|.|.....+ ..+.|+|++++.. +.. ...++......|.|.+++..|+|.|.
T Consensus 5 ~~~~~~~p~~~v~~~~G~~v~l~C~~~~~~--~~~~i~W~~~~~~-----~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~ 76 (325)
T 1n26_A 5 RCPAQEVARGVLTSLPGDSVTLTCPGVEPE--DNATVHWVLRKPA-----AGS-HPSRWAGMGRRLLLRSVQLHDSGNYS 76 (325)
T ss_dssp CCCCCCCCTTEEEECTTCCEEEECTTSCTT--CCSEEEEEEECSS-----SSC-CCEEEEEESSEEEECSCCGGGCEEEE
T ss_pred cCCccccCCCcEECCCCCcEEEEeCCCCCC--CCceEEEEECCcc-----CCc-cccccccccceEEecccchhhCeEeE
Confidence 35542 245556668999999999876432 1257999998754 110 11233444566999999999999999
Q ss_pred EEeCCeeeEEEeeeecc
Q psy10772 351 CWLGNTVLCTHNLTVDA 367 (378)
Q Consensus 351 C~~~~~~l~~~~~~v~~ 367 (378)
|...+...++-.|.|..
T Consensus 77 C~~~g~~~~~~~L~V~~ 93 (325)
T 1n26_A 77 CYRAGRPAGTVHLLVDV 93 (325)
T ss_dssp EESSSSCSCEEEEEECC
T ss_pred EEeCCEEeeeEEEEecc
Confidence 99877788888888875
No 238
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.81 E-value=4.9e-05 Score=61.62 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=49.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-------cCcceEee---cC---ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-------SDKFIRTV---DG---GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-------~~~~~~~~---~~---GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|...... ..+.|.|+.+...++..-|-. . .++|+... .. -|.|.+++.+
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~--~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 84 (116)
T 1fo0_A 7 QTSISVMEKTTVTMDCVYETQD--SSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIE 84 (116)
T ss_dssp CCEEEEETTCCEEECCEECCCC--SSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCGG
T ss_pred CCcEEEecCCcEEEEeEecCCC--CCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 3567899999999999986442 224799998754322211210 0 12344442 11 3999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|...+
T Consensus 85 DsG~Y~C~~~~ 95 (116)
T 1fo0_A 85 DSAVYFCAMRG 95 (116)
T ss_dssp GCEEEEEEEEC
T ss_pred hCEEEEEEEEc
Confidence 99999999875
No 239
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=97.81 E-value=0.0001 Score=68.14 Aligned_cols=125 Identities=18% Similarity=0.124 Sum_probs=75.4
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCccccc--ccceeEEEEeCCeeeeeeeeccCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESS--VGRLKQTVTWGQSVHLSCFVKLPAS 301 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~--~~~k~~~~~~G~s~~L~C~~r~~~~ 301 (378)
.+.+..++..| .+.|++. +-...|....- ...+.... ...... .....+.+..|+++.|.|...+.+.
T Consensus 63 ~L~i~~v~~~d---~G~Y~C~-a~n~~g~~~~~~~l~V~~~p-----~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 133 (305)
T 2nzi_A 63 QLIIASVTDDD---ATVYQVR-ATNQGGSVSGTASLEVEVPA-----KIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPD 133 (305)
T ss_dssp EEEESSCCGGG---CSEEEEE-EEETTEEEEEEEEEEECEEE-----EECCCHHHHSSCCEEEETTCCEEEEEEEEEESC
T ss_pred EEEEccCChhh---CeEEEEE-EEcCCCCccceEEEEEecCC-----ccCCCccccccccEEecCCCEEEEEEEECCCCC
Confidence 45555555554 5789988 34456664321 11111110 111000 0124567888999999999876544
Q ss_pred CCCCCeEEEEecccCceeeEeeccCcceEee----cCceEEee-ecCCCCeEEEEEeCC---eeeEEEeeeeccc
Q psy10772 302 MANQPMSWYHYSKDKGRYQIKFRSDKFIRTV----DGGLVIMA-VEELDAGKYDCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 302 La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~----~~GLlI~~-v~~~DsG~Y~C~~~~---~~l~~~~~~v~~~ 368 (378)
|.++|+.++.. +. .+.++... ..-|+|.+ ++..|+|.|.|.+.| ..-.+..|.|.+.
T Consensus 134 ---p~i~W~~~~~~-----~~--~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 198 (305)
T 2nzi_A 134 ---PVITWQKGQDL-----ID--NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADV 198 (305)
T ss_dssp ---CEEEEEESSSB-----CC--SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred ---CEEEEEECCEE-----CC--CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecC
Confidence 58999987754 32 23332221 23488998 999999999999987 5556667777643
No 240
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.81 E-value=5.9e-05 Score=65.17 Aligned_cols=77 Identities=14% Similarity=0.241 Sum_probs=51.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----ccCcceEeecCceEEeeecCCCCeEEEEEeCC-
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----RSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN- 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~- 355 (378)
...+..|..+.|.|...+.+. |.|+|+.++.+ +.. ..+. ......-|.|.++...|+|.|.|.+.|
T Consensus 127 ~~~~~~~~~~~~~c~~~g~p~---p~i~W~~~~~~-----~~~~~~~~~~~-~~~~~s~L~i~~~~~~d~g~YtC~a~N~ 197 (218)
T 4frw_A 127 ALEEGQGLTLAASCTAEGSPA---PSVTWDTEVKG-----TTSSRSFKHSR-SAAVTSEFHLVPSRSMNGQPLTCVVSHP 197 (218)
T ss_dssp CEETTCCSEEEEEEEEEEBSC---CEEEEEESSCC-----EEEEEEEECSS-SEEEEEEEEECCCGGGTTCEEEEEEECT
T ss_pred eeeeeeccccceeeeccCCcC---ceEEEEECCcc-----cccCceEecCC-cEEEEEEEEEeeCCHHhCeEEEEEEEeC
Confidence 345566889999999876554 68999998764 321 0111 111223488999999999999999988
Q ss_pred ----eeeEEEeeeec
Q psy10772 356 ----TVLCTHNLTVD 366 (378)
Q Consensus 356 ----~~l~~~~~~v~ 366 (378)
..-..+.|.|-
T Consensus 198 ~g~~~~~~t~~v~V~ 212 (218)
T 4frw_A 198 GLLQDQRITHILHVS 212 (218)
T ss_dssp TCSSCEEEEEECCEE
T ss_pred CCCeEEEEEEEEEEC
Confidence 33345555554
No 241
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=97.80 E-value=4.2e-05 Score=61.53 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=49.1
Q ss_pred ceeEEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEe-e-c----------c-CcceEeecC----ceEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIK-F-R----------S-DKFIRTVDG----GLVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~-~-~----------~-~~~~~~~~~----GLlI~~ 340 (378)
...+.+.+|+++.|.|... ..+ .+.|.|+.+...++...|. . . . .+|+..... -|.|.+
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~~---~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~ 82 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVKD---KDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIG 82 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCSC---GGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESS
T ss_pred CceEEEeCCCCEEEEEEccCCcc---cceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECC
Confidence 3567888999999999975 322 2479999875432221121 0 0 0 345444322 399999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
++.+|+|.|.|.+.+
T Consensus 83 ~~~~DsG~Y~C~~~~ 97 (111)
T 2qhl_A 83 TREDDGGEYFCGEVE 97 (111)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CChhHCEEEEEEEcc
Confidence 999999999999875
No 242
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=97.80 E-value=2.1e-05 Score=76.26 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=55.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.. .+. ...+......-|.|.+++.+|+|.|.|.+.| .
T Consensus 213 ~~~~~~~G~~v~l~C~~~g~P~---p~i~W~k~~~~----~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 283 (384)
T 3kld_A 213 ETVPAEKGTTVKLECFALGNPV---PTILWRRADGK----PIA--RKARRHKSNGILEIPNFQQEDAGSYECVAENSRGK 283 (384)
T ss_dssp SEEEEETTSCEEEEEEEEEESC---CEEEEEETTCC----CCC--TTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CceEecCCCcEEEEEEEeecCC---CcEEEEeCCCc----ccc--ccceecCCCcEEEECCCChhhCEEEEEEEEcCCCe
Confidence 3567888999999999876654 68999875321 021 1222222233489999999999999999987 5
Q ss_pred eeEEEeeeeccc
Q psy10772 357 VLCTHNLTVDAH 368 (378)
Q Consensus 357 ~l~~~~~~v~~~ 368 (378)
..++..|+|...
T Consensus 284 ~~~~~~l~v~~~ 295 (384)
T 3kld_A 284 NVAKGQLTFYAQ 295 (384)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEecC
Confidence 556667776543
No 243
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.80 E-value=2.7e-05 Score=72.93 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=55.9
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCC-eEEEEecccCceeeEeeccCcceEeecCceEEe-eecCCCCeEEEEEeCC---ee
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQP-MSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIM-AVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~-v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~-~v~~~DsG~Y~C~~~~---~~ 357 (378)
.+.+|+++.|.|...+.+. |. ++|++++.+ +. .+ ......-|.|. +++..|+|.|.|.+.| ..
T Consensus 243 ~~~~g~~~~l~C~~~g~p~---p~~i~W~~~~~~-----~~--~~--~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~ 310 (331)
T 3u83_A 243 WYLQRMDVKLTCKADANPP---ATEYHWTTLNGS-----LP--KG--VEAQNRTLFFKGPINYSLAGTYICEATNPIGTR 310 (331)
T ss_dssp CBTTCCCEEEEEEEEEESC---CCEEEEEETTBS-----CC--TT--EEEETTEEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred eEeCCCeEEEEEeCcCCCC---CCEEEEEECCCc-----cc--cc--ceecCcEEEEeCCCccccCeEEEEEEEeccccc
Confidence 3567999999999876544 56 999988764 32 11 23345668898 8999999999999987 66
Q ss_pred eEEEeeeecccc
Q psy10772 358 LCTHNLTVDAHS 369 (378)
Q Consensus 358 l~~~~~~v~~~~ 369 (378)
-++..|.|.+.+
T Consensus 311 ~~~~~l~V~~~~ 322 (331)
T 3u83_A 311 SGQVEVNITEAA 322 (331)
T ss_dssp EEEEEECCBC--
T ss_pred eEEEEEEEeccc
Confidence 778888887654
No 244
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.80 E-value=5.9e-05 Score=62.24 Aligned_cols=77 Identities=22% Similarity=0.296 Sum_probs=49.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC-CCCCCeEEEEecccCceeeEeec-------cCcceEee-cC---ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS-MANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV-DG---GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~-La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~-~~---GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|.....+. ...+.|.|+.+...+....|-.. ..+|+... .. -|.|.+|+.+|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~~Ds 87 (126)
T 4ffy_L 8 PASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDA 87 (126)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCHHHC
Confidence 34578899999999999864430 01247999987532222112110 12343332 12 399999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 88 G~Y~C~~~~ 96 (126)
T 4ffy_L 88 ATYYCQQNN 96 (126)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEec
Confidence 999999987
No 245
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.80 E-value=1.6e-05 Score=69.62 Aligned_cols=64 Identities=14% Similarity=0.156 Sum_probs=44.0
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcc---eEe---ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF---IRT---VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~---~~~---~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+.+|+++.|.|...+. .+.++|+.++.. +. +... ... ....|.|.+|+.+|+|.|.|.+.|
T Consensus 110 ~~v~~G~~v~L~C~~~~~----~~~v~W~k~g~~-----~~--~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 178 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA----FDGFILCKEGED-----EH--PQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYD 178 (198)
T ss_dssp SEEETTCCEEEEEECSSC----CSEEEEEEC-------------CEEEC------CCEEEEEECCCCTTSCEEEEEEEEC
T ss_pred cccCCCCcEEEEEecCCC----CcEEEEEECCCc-----cC--CccccccccCCCcceeEEEecccCcccCeEEEEEEEe
Confidence 567899999999998655 248999998764 21 1111 111 125699999999999999999987
Q ss_pred e
Q psy10772 356 T 356 (378)
Q Consensus 356 ~ 356 (378)
.
T Consensus 179 ~ 179 (198)
T 1ugn_A 179 S 179 (198)
T ss_dssp T
T ss_pred C
Confidence 3
No 246
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.80 E-value=1.4e-05 Score=69.52 Aligned_cols=63 Identities=19% Similarity=0.318 Sum_probs=46.6
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+.+|+++.|.|....++ +.++|+.++.. +. ...+.......|.|.+++.+|+|.|.|.+.|.
T Consensus 104 ~v~~G~~v~l~C~~~~~~----~~~~w~k~g~~-----~~--~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 166 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGF----DQFALYKEGDP-----AP--YKNPERWYRASFPIITVTAAHSGTYRCYSFSS 166 (184)
T ss_dssp SSCCTTCEEEEEECSSCC----CEEEEEECCCC-----TT--SCCCCEEEEESSSEEEETTCCSEEEEEEEECT
T ss_pred eecCCCcEEEEEEcCCCC----cEEEEEECCCc-----Cc--ceecCCCceEEEEEccCCccCCeEEEEEEEeC
Confidence 456799999999975442 37999988764 21 11122334567999999999999999999873
No 247
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=97.80 E-value=2.2e-05 Score=75.30 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=54.0
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe-----------ecCceEEeeecCCCCeEEEE
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT-----------VDGGLVIMAVEELDAGKYDC 351 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~-----------~~~GLlI~~v~~~DsG~Y~C 351 (378)
.+.+|+++.|.|.+.+.+. |.|+|+.++.. +. .+.+... ...-|.|.+++.+|+|.|.|
T Consensus 257 ~~~~g~~v~l~C~~~g~P~---p~i~W~~~g~~-----l~--~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 326 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPA---PSLRWLFNGSV-----LN--ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL 326 (347)
T ss_dssp CCEESSSEEEEEEEEEESC---CEEEEEETTEE-----CC--CCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEE
T ss_pred cCccCceEEEEEEeeecCC---CcEEEEeCCEE-----CC--CCcceeeEEEeecCCCcccceEEEECCCCcccCceEEE
Confidence 3567999999999976644 68999987653 32 2222111 12239999999999999999
Q ss_pred EeCC---eeeEEEeeeecc
Q psy10772 352 WLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 352 ~~~~---~~l~~~~~~v~~ 367 (378)
.+.| ..-++..|+|.+
T Consensus 327 ~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 327 LAANPFGQASASIMAAFMD 345 (347)
T ss_dssp EEEETTEEEEEEEEECSCC
T ss_pred EEecCCCceeeEEEEEecC
Confidence 9987 666777777654
No 248
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.80 E-value=4.5e-05 Score=70.72 Aligned_cols=87 Identities=15% Similarity=0.281 Sum_probs=55.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+........+.. ..+.|+..... -|.|.+++.+|+|
T Consensus 19 p~~~~v~~G~~v~L~C~~~~~p---~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 95 (276)
T 3auv_A 19 PSSLSASVGDRVTITCRASQDV---STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFA 95 (276)
T ss_dssp CSEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEEEcCCCCEEEEeEcCCCC---CCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCE
Confidence 4567888999999999986543 35899998754322111211 01234443322 4999999999999
Q ss_pred EEEEEeCCee----eEEEeeeeccc
Q psy10772 348 KYDCWLGNTV----LCTHNLTVDAH 368 (378)
Q Consensus 348 ~Y~C~~~~~~----l~~~~~~v~~~ 368 (378)
.|.|.+.+.. -....|+|...
T Consensus 96 ~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 96 TYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp EEEEEECSSSSCCCCCCEEEEC---
T ss_pred EEEEEEecCCcccccCCEEEEEecC
Confidence 9999998741 12245666543
No 249
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.79 E-value=4.8e-05 Score=66.81 Aligned_cols=73 Identities=18% Similarity=0.285 Sum_probs=48.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|.....+. +.|.|+.+........+.. ...+|+..... .|.|.+++.+|+|.
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPK---NFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAA 83 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGG---SCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSE
T ss_pred CeEEEeCCCcEEEEEecCCCCC---CeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEE
Confidence 4578899999999999765433 4799988643211111100 01234333222 49999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.+
T Consensus 84 Y~C~~~n 90 (212)
T 1nfd_E 84 YYCLSSY 90 (212)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999983
No 250
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.78 E-value=9.5e-05 Score=66.67 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=53.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC--CCCCCeEEEEecccCceeeEee-ccCc---------ceE-----eecCceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS--MANQPMSWYHYSKDKGRYQIKF-RSDK---------FIR-----TVDGGLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~--La~~~v~W~~~~~~~~~~~l~~-~~~~---------~~~-----~~~~GLlI~~v 341 (378)
...+.+..|+++.|.|...+.+. .....|.|+.+........+.. ..+. ++. .....|.|.+|
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 89 (248)
T 3pv7_A 10 GGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGI 89 (248)
T ss_dssp TSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSC
T ss_pred CCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCC
Confidence 45678899999999999854322 1112499998754322110100 0001 100 01112999999
Q ss_pred cCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+ ..-....|.|..
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~ 118 (248)
T 3pv7_A 90 QLEEAGEYRCEVVVTPLKAQGTVQLEVVA 118 (248)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred CHHHCeEEEEEEEeCCccceeEEEEEEec
Confidence 99999999999875 334556676655
No 251
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.78 E-value=4.3e-05 Score=70.39 Aligned_cols=83 Identities=17% Similarity=0.303 Sum_probs=54.9
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCC-eEEEEecccCceeeEeeccC-----cceEeecCceEEeeecCCCCeEEEEEeC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQP-MSWYHYSKDKGRYQIKFRSD-----KFIRTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~-v~W~~~~~~~~~~~l~~~~~-----~~~~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
...+.+|+++.|.|...+.+. |. ++|++++....+. +..... ........-|.|.+++..|+|.|.|.+.
T Consensus 197 ~~~v~~G~~v~l~C~~~g~p~---p~~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 272 (290)
T 2o26_X 197 SHLLKKGDTFTVVCTIKDVST---SVNSMWLKMNPQPQHI-AQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYAN 272 (290)
T ss_dssp BCCCCTTCCEEEEEEEEESST---TCEEEEEEESSSEEEC-CCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEE
T ss_pred cceEecCCcEEEEEEEecCCc---ceeEEEecCCCCCccc-eeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEe
Confidence 346788999999999975544 54 9999997651000 010011 1112233459999999999999999998
Q ss_pred C---eeeEEEeeeecc
Q psy10772 355 N---TVLCTHNLTVDA 367 (378)
Q Consensus 355 ~---~~l~~~~~~v~~ 367 (378)
| ..-++..|.|.+
T Consensus 273 N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 273 NTFGSANVTTTLKVVE 288 (290)
T ss_dssp CSSCEEEEEEEECC--
T ss_pred CCCCcEEEEEEEEEEe
Confidence 7 556666777654
No 252
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.78 E-value=1.7e-05 Score=81.56 Aligned_cols=77 Identities=10% Similarity=0.054 Sum_probs=56.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
.+.+.+|+++.|.|...+.+. |.|+|+.++.+ |. .+.+.......|.|.+++.+|+|.|.|.+.| ..
T Consensus 335 ~~~v~~G~~v~L~C~~~g~P~---p~i~W~k~g~~-----l~--~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~ 404 (527)
T 3qs9_E 335 DYEIDQYEEFCFSVRFKAYPQ---IRCTWTFSRKS-----FP--CEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQF 404 (527)
T ss_dssp EECCCTTCCCCEEEEEEEESC---CEEEEEETTEE-----EE--CBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEE
T ss_pred cEEEcCCCeEEEEEEEEecCC---CEEEEEECCEE-----Cc--CCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcE
Confidence 456778999999999876544 68999988754 53 2333333455699999999999999999987 45
Q ss_pred eEEEeeeecc
Q psy10772 358 LCTHNLTVDA 367 (378)
Q Consensus 358 l~~~~~~v~~ 367 (378)
-.+..|.|..
T Consensus 405 ~~~~~L~V~~ 414 (527)
T 3qs9_E 405 TKMFTLNIRR 414 (527)
T ss_dssp EEEEEEC--C
T ss_pred EEEEEEEEec
Confidence 5677777763
No 253
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.78 E-value=5e-05 Score=69.52 Aligned_cols=90 Identities=19% Similarity=0.270 Sum_probs=56.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee-cC---ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV-DG---GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~-~~---GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+. +.|.|+.+........|... .+.|+... .. -|.|.+++.+|+|
T Consensus 146 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 222 (257)
T 1f3r_B 146 PSLLSASVGDRVTLSCKGSQNIN---NYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVA 222 (257)
T ss_dssp TSEECCCTTCCEEEEEECSSCCB---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCS
T ss_pred CCEEEEcCCCCEEEEEEECCcCC---CcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCE
Confidence 34567889999999999865433 47999985422111011100 12343322 11 3999999999999
Q ss_pred EEEEEeCCeeeEEE----eeeecccccCC
Q psy10772 348 KYDCWLGNTVLCTH----NLTVDAHSNVA 372 (378)
Q Consensus 348 ~Y~C~~~~~~l~~~----~~~v~~~~c~~ 372 (378)
.|.|.+.|.. ..+ .|+|....-.+
T Consensus 223 ~Y~C~a~n~~-~~~g~gt~l~V~~~~~~~ 250 (257)
T 1f3r_B 223 TYFCYQYNNG-YTFGAGTKLELKAAEQKL 250 (257)
T ss_dssp EEEEEEESSS-EEECCCCEECCSSSCCCC
T ss_pred EEEEEEeCCC-CeECCCEEEEEeCCCcCC
Confidence 9999998854 333 56666554433
No 254
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.77 E-value=0.00011 Score=59.01 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=49.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c------cCcceEee------cCceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R------SDKFIRTV------DGGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~------~~~~~~~~------~~GLlI~~v~~~D 345 (378)
.+.+++.+|+++.|.|...... .+.|.|+.+...++...|-. . ..+|+... .--|.|.+++.+|
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~D 83 (112)
T 2z35_A 7 GGQVALSEEDFLTIHCNYSASG---YPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESD 83 (112)
T ss_dssp CSEEEEETTCCEEECCEEECSS---CCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTT
T ss_pred CCcEEEcCCCCEEEEEEECCCC---CCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhh
Confidence 3567899999999999986442 24799998754322211211 0 12344432 1239999999999
Q ss_pred CeEEEEEeC
Q psy10772 346 AGKYDCWLG 354 (378)
Q Consensus 346 sG~Y~C~~~ 354 (378)
+|.|.|.+.
T Consensus 84 sG~Y~C~~~ 92 (112)
T 2z35_A 84 SAVYYCALS 92 (112)
T ss_dssp CSEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999986
No 255
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=97.77 E-value=7e-05 Score=63.08 Aligned_cols=92 Identities=20% Similarity=0.322 Sum_probs=59.3
Q ss_pred eeEEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEe-ec-----------c-CcceEeecC----ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIK-FR-----------S-DKFIRTVDG----GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~-~~~~~~~~~----GLlI~~v 341 (378)
+.+.+.+|+++.|.|... ... ...+.|+.+...++...|. .. . .+|+..... -|.|.++
T Consensus 7 ~~v~v~~G~~vtL~C~~s~~~~---~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~L~I~~~ 83 (137)
T 3bdb_A 7 HVKTVKRGENVTMECSMSKVTN---KNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGA 83 (137)
T ss_dssp EECCCCTTCEECCCCBCTTCCC---GGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEEESC
T ss_pred CeEEEcCCCCEEEEeecCCCcC---cceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecCCEEEEEECCC
Confidence 456778899999999975 222 2479999875432221121 00 0 245443322 2999999
Q ss_pred cCCCCeEEEEEeCCeee----EEEeeeecccccCCCC
Q psy10772 342 EELDAGKYDCWLGNTVL----CTHNLTVDAHSNVADA 374 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~l----~~~~~~v~~~~c~~~~ 374 (378)
+.+|+|.|.|...+... ..-.|+|.......|+
T Consensus 84 ~~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~~~~~~~ 120 (137)
T 3bdb_A 84 REDDGGEYFCGEVEGIIIKFTSGTRLQFEGSNEGSKS 120 (137)
T ss_dssp CSTTCEEEEEEEECSSCEEEEEEEEECCCCCCCCSSS
T ss_pred CHHHCEEEEEEEccCCeEEECCCEEEEEECCCCCccc
Confidence 99999999999976322 3447888777665544
No 256
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.77 E-value=3.7e-05 Score=68.39 Aligned_cols=70 Identities=27% Similarity=0.343 Sum_probs=50.5
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC-eeeEE
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN-TVLCT 360 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~-~~l~~ 360 (378)
..+.+|+++.|.|...+.+. ...++|+.++.. |. .+ ..-|.|.+++.+|+|.|.|.+.| ..-..
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~--~~~v~W~k~g~~-----l~--~~------~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~ 81 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPE--DQSTQWFHNESL-----IS--SQ------ASSYFIDAATVDDSGEYRCQTQLSTLSDP 81 (204)
T ss_dssp SEEETTCCEEEEEECCSSSS--CCCEEEEETTEE-----ES--CC------SSEEEESSCCGGGCEEEEEEETTSBCCCC
T ss_pred eEEECCCCEEEEEcCCCCCC--CcEEEEEECCEE-----cc--cC------ccEEEEecccccCCEEEEEEeCCCccccc
Confidence 57889999999999865432 124999987653 42 11 26799999999999999999987 22233
Q ss_pred Eeeeec
Q psy10772 361 HNLTVD 366 (378)
Q Consensus 361 ~~~~v~ 366 (378)
..|.|.
T Consensus 82 ~~l~V~ 87 (204)
T 3sgj_C 82 VQLEVH 87 (204)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 445554
No 257
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.77 E-value=1.7e-05 Score=68.04 Aligned_cols=72 Identities=21% Similarity=0.155 Sum_probs=51.5
Q ss_pred EEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe----
Q psy10772 282 QTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT---- 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~---- 356 (378)
..+.+|+++.|.|... .++. +.++|+.++.. +. . ......|.|.+++.+|+|.|.|.+.|.
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~g~~-----~~--~----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 160 (176)
T 1f2q_A 95 EVVMEGQPLFLRCHGWRNWDV---YKVIYYKDGEA-----LK--Y----WYENHNISITNATVEDSGTYYCTGKVWQLDY 160 (176)
T ss_dssp SEEETTSCEEEEEEEGGGCCE---EEEEEEETTEE-----CC--S----CCCSSEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred ceeeCCCCEEEEEEecCCCCc---eEEEEEECCEE-----Ee--e----ecCCCeEEECCCCcccCEEEEEEEEeCCcce
Confidence 4577899999999984 3333 47999987653 42 1 122456999999999999999999973
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-....|+|..
T Consensus 161 ~s~~~~l~V~~ 171 (176)
T 1f2q_A 161 ESEPLNITVIK 171 (176)
T ss_dssp ECCCEEEEEEC
T ss_pred EecCEEEEEec
Confidence 23345666654
No 258
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=97.77 E-value=2.4e-05 Score=63.92 Aligned_cols=76 Identities=18% Similarity=0.216 Sum_probs=48.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCC-CCCCCCeEEEEec--ccCceeeEeeccCcceEee---------cCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA-SMANQPMSWYHYS--KDKGRYQIKFRSDKFIRTV---------DGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~-~La~~~v~W~~~~--~~~~~~~l~~~~~~~~~~~---------~~GLlI~~v~~~Ds 346 (378)
...+.+.+|+++.|+|....+. +.....|.|+.+. ..+..........+|+... .--|.|.+|+.+|+
T Consensus 14 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~~Ds 93 (120)
T 3noi_A 14 PPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRGHDA 93 (120)
T ss_dssp CSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCGGGC
T ss_pred CCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCChhhC
Confidence 3467899999999999986543 1112368999875 2111000000112343322 12499999999999
Q ss_pred eEEEEEeC
Q psy10772 347 GKYDCWLG 354 (378)
Q Consensus 347 G~Y~C~~~ 354 (378)
|.|.|...
T Consensus 94 G~Y~C~v~ 101 (120)
T 3noi_A 94 SIYVCRVE 101 (120)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999976
No 259
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=97.76 E-value=0.00013 Score=61.96 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=56.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-------cCcceEeec------CceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-------SDKFIRTVD------GGLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-------~~~~~~~~~------~GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|...... ....|.|+.+....+...|-. . ..+|+.... --|.|.+|+.+
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~--~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~ 84 (142)
T 2ol3_A 7 QTSISVMEKTTVTMDCVYETQD--SSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQIE 84 (142)
T ss_dssp CSEEEEETTCCEEECCBCCCCC--SSCEEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCCTT
T ss_pred CCeEEEecCCCEEEEEEecCCc--CCceEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCChh
Confidence 3567889999999999975432 123699998854332221211 1 123554421 13999999999
Q ss_pred CCeEEEEEeCCe-----ee----EEEeeeecccccCCCCC
Q psy10772 345 DAGKYDCWLGNT-----VL----CTHNLTVDAHSNVADAP 375 (378)
Q Consensus 345 DsG~Y~C~~~~~-----~l----~~~~~~v~~~~c~~~~~ 375 (378)
|+|.|.|...+. .. .--.|+|......+|.+
T Consensus 85 Dsg~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~~~~~~~~ 124 (142)
T 2ol3_A 85 DSAVYFCAMRGDYGGSGNKLIFGTGTLLSVKPGSADDAKK 124 (142)
T ss_dssp TCEEEEEEEECSSSSCSSCEEECCCEEEEEECCC------
T ss_pred hCEEEEEEEEcCcCCcccccEECCCEEEEEecCCcCCCCc
Confidence 999999998641 11 12367787766555544
No 260
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=97.76 E-value=5.3e-05 Score=62.60 Aligned_cols=77 Identities=19% Similarity=0.274 Sum_probs=49.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCC----CCCCCCeEEEEecccCcee-eEee---------ccCcceEeecC------ceEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA----SMANQPMSWYHYSKDKGRY-QIKF---------RSDKFIRTVDG------GLVI 338 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~----~La~~~v~W~~~~~~~~~~-~l~~---------~~~~~~~~~~~------GLlI 338 (378)
...+.+.+|+++.|+|....+. ......|.|+.+....+.. -+.. ...+|+....+ -|.|
T Consensus 13 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 92 (132)
T 1nko_A 13 QSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSI 92 (132)
T ss_dssp CSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTBCCEEE
T ss_pred CCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCceEEEE
Confidence 3567899999999999986432 2233579999875432111 0111 11245554332 4999
Q ss_pred eeecCCCCeEEEEEeCC
Q psy10772 339 MAVEELDAGKYDCWLGN 355 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~ 355 (378)
.+|+.+|+|.|.|...+
T Consensus 93 ~~v~~~DsG~Y~C~v~~ 109 (132)
T 1nko_A 93 RDARMSDAGRYFFRMEK 109 (132)
T ss_dssp CSCCGGGCEEEEEEEEE
T ss_pred cccCcccCeeEEEEEEc
Confidence 99999999999999875
No 261
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=97.76 E-value=7.2e-05 Score=65.82 Aligned_cols=86 Identities=19% Similarity=0.116 Sum_probs=54.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----------ccCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|...+.+. ..+.|.|+.+........+.. ...+|+.... . .|.|.+|+.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 87 (210)
T 3d9a_H 9 PSLVKPSQTLSLTCSVTGDSI-TSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTT 87 (210)
T ss_dssp CSEECTTSCEEEEEEEESSCG-GGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEecCCCcEEEEEEEecccC-CCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCc
Confidence 457889999999999875421 125799988743221111110 0134544331 1 599999999
Q ss_pred CCCeEEEEEeCCee--eEEEeeeecc
Q psy10772 344 LDAGKYDCWLGNTV--LCTHNLTVDA 367 (378)
Q Consensus 344 ~DsG~Y~C~~~~~~--l~~~~~~v~~ 367 (378)
+|+|.|.|.+.+.. -....|+|..
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~l~V~~ 113 (210)
T 3d9a_H 88 EDTATYYCANWDGDYWGQGTLVTVSA 113 (210)
T ss_dssp GGCEEEEEEETTSSCBCCCEEEEECC
T ss_pred ccCEEEEEEEecCcccccceEEEecc
Confidence 99999999998742 1234566654
No 262
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=97.76 E-value=2.4e-05 Score=68.76 Aligned_cols=73 Identities=26% Similarity=0.423 Sum_probs=48.9
Q ss_pred eeEEEEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCce-eeEeeccCcceEee-cCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGR-YQIKFRSDKFIRTV-DGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~-~~l~~~~~~~~~~~-~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
....+.+|+++.|.|.. .+.+ .|.++|+.++.+... .......+.++... ..-|.|.+++.+|+|.|.|.+.|
T Consensus 116 ~~~~~~~g~~v~l~C~~~~g~p---~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N 191 (217)
T 2vr9_A 116 KDTRVAKGETALLECGPPKGIP---EPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQN 191 (217)
T ss_dssp CCEEECTTSCEEECCBCCCEES---CCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEE
T ss_pred CccEEcCCCeEEEEEECCCCCC---CCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEc
Confidence 45678889999999987 4443 368999998754100 00001123344333 34499999999999999999987
No 263
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=97.75 E-value=9e-05 Score=65.55 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=49.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e----------ccCcceEee-cCc---eEEeeecCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F----------RSDKFIRTV-DGG---LVIMAVEEL 344 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~----------~~~~~~~~~-~~G---LlI~~v~~~ 344 (378)
..+.+.+|+++.|.|.....+ ...+.|.|+.+........+- . ...+|+... ..+ |.|.+|+.+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFS-LNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSC-TTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCEEEcCCCcEEEEEEecCcc-cCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 356788999999999986422 223579998764332221110 0 112343332 334 999999999
Q ss_pred CCeEEEEEeCCe
Q psy10772 345 DAGKYDCWLGNT 356 (378)
Q Consensus 345 DsG~Y~C~~~~~ 356 (378)
|+|.|.|.+.+.
T Consensus 86 D~G~Y~C~~~~~ 97 (215)
T 3nl4_H 86 DTATYFCVRKYG 97 (215)
T ss_dssp GCEEEEEEEECS
T ss_pred cCEEEEEEEecC
Confidence 999999999764
No 264
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.75 E-value=3.7e-05 Score=70.07 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=50.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-ee----------ccCcceEeecC------ceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-KF----------RSDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~~----------~~~~~~~~~~~------GLlI~~v~ 342 (378)
..+.+.+|+++.|.|.....+ .+.+.+.|+.+........+ .. ...+|+....+ -|.|.+|+
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 94 (257)
T 3gkz_A 16 GPSLVKPSQTLSLTCSVTGDS-VTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVS 94 (257)
T ss_dssp CCSEECTTCCEEEEEEEEESC-CSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCeEEcCCCcEEEEEEEEccc-ccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCC
Confidence 445688999999999987532 13358999886432221111 00 11234444432 29999999
Q ss_pred CCCCeEEEEEeCCe
Q psy10772 343 ELDAGKYDCWLGNT 356 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~ 356 (378)
.+|+|.|.|.+.+.
T Consensus 95 ~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 95 SEDTATYYCSYFDS 108 (257)
T ss_dssp GGGCEEEEEEEECT
T ss_pred hhhCEEEEEEEecC
Confidence 99999999999874
No 265
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.75 E-value=4.4e-05 Score=66.29 Aligned_cols=75 Identities=19% Similarity=0.370 Sum_probs=45.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCce-----eeEeec----cCcce-----------EeecCceEEee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR-----YQIKFR----SDKFI-----------RTVDGGLVIMA 340 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~-----~~l~~~----~~~~~-----------~~~~~GLlI~~ 340 (378)
.+.+..|+++.|+|...+++......|+|+.++...-. +.+... ...+. ...+.-|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 47788999999999986554411113899876532100 000000 00010 01123499999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
|+.+|+|.|.|.+.+
T Consensus 90 v~~~D~G~Y~C~~~~ 104 (225)
T 4fmk_A 90 LRVEDEGNYTCEFAT 104 (225)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCHHHCcceEEEEEe
Confidence 999999999999865
No 266
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.75 E-value=5.3e-05 Score=62.44 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=50.8
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecc-cCceeeEeeccCcceE------eecCceEEeeecCCCCeEEEEEeC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSK-DKGRYQIKFRSDKFIR------TVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~-~~~~~~l~~~~~~~~~------~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.++..|+++.|+|..+.=. ++|+|+|.-.+. ...+ |.....-+-- ++.-=|-|-+|..+|+|.|.|.++
T Consensus 24 ~tv~~G~~~~LeCpv~yc~--~rPnVtWcK~~~~~c~~--L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn 99 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCV--HRPNVTWCKHNGTIWVP--LEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTN 99 (122)
T ss_dssp EEECTTSCEEEEEEEECSS--SCCCEEEEEECSSSEEE--CCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEE
T ss_pred EEEecCCeEEEEeEecCCC--CCCcEEEEecCCeeccc--cccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEee
Confidence 5677899999999997521 246899966532 2111 1110110000 112247788999999999999999
Q ss_pred C--eeeEEEeeee
Q psy10772 355 N--TVLCTHNLTV 365 (378)
Q Consensus 355 ~--~~l~~~~~~v 365 (378)
+ ...-|+.+++
T Consensus 100 ~~~g~ieSHs~ti 112 (122)
T 1xau_A 100 FNSQVINSHSVTI 112 (122)
T ss_dssp ETTEEEECCCEEE
T ss_pred CCCCceeeeEEEE
Confidence 8 7777766654
No 267
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.75 E-value=0.00012 Score=69.16 Aligned_cols=80 Identities=21% Similarity=0.256 Sum_probs=55.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEe--------ecCceEEeeecCCCCe-EE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRT--------VDGGLVIMAVEELDAG-KY 349 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~--------~~~GLlI~~v~~~DsG-~Y 349 (378)
..+.+.+|+++.|.|...+.+.++.| .++|++++.+ +. ..+.+... ...-|.|.+++.+|+| .|
T Consensus 236 ~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~-----i~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y 309 (329)
T 3oq3_B 236 PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGW-----II-GLDFGVYSILTSSGGITEATLYFENVTEEYIGNTY 309 (329)
T ss_dssp SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSC-----BC-CBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEE
T ss_pred CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCee-----ee-ccCCceeeeecccCceeEeEEEEEeccHHHCCCcE
Confidence 34778899999999999877644445 6799998764 11 01111111 2345999999999999 99
Q ss_pred EEEeCC---eeeEEEeeee
Q psy10772 350 DCWLGN---TVLCTHNLTV 365 (378)
Q Consensus 350 ~C~~~~---~~l~~~~~~v 365 (378)
.|.+.| ..-.+-.|.|
T Consensus 310 ~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 310 TCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCceEEEEEEEe
Confidence 999988 4445555554
No 268
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.75 E-value=4e-05 Score=69.23 Aligned_cols=75 Identities=19% Similarity=0.181 Sum_probs=49.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-e-----------eccCcceEeecCc------eEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-K-----------FRSDKFIRTVDGG------LVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~-----------~~~~~~~~~~~~G------LlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.+.|+.+........+ . ....+|+....++ |.|.+|
T Consensus 139 ~~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 217 (250)
T 3esu_F 139 GPELVKPGASVKISCKDSGYAF-SSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSL 217 (250)
T ss_dssp CCEEECTTCCEEEEEECCSTTG-GGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CceEEcCCceEEEEEEecCCcc-cCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCC
Confidence 4567889999999999865321 1357999987322111111 0 0112455555443 999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.+
T Consensus 218 ~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 218 TSVDSAVYFCARSG 231 (250)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CcccCEEEEEEEec
Confidence 99999999999985
No 269
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.94 E-value=3.9e-06 Score=67.65 Aligned_cols=73 Identities=21% Similarity=0.203 Sum_probs=48.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-------eccCcceEeec------CceEEeeecCCCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-------FRSDKFIRTVD------GGLVIMAVEELDA 346 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-------~~~~~~~~~~~------~GLlI~~v~~~Ds 346 (378)
+.+.+.+|+++.|.|.....+ .+.|.|+.+....+...|- ...++|+.... --|.|.+++.+|+
T Consensus 7 ~~v~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 83 (110)
T 1u3h_A 7 QSLTVWEGETAILNCSYENSA---FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 83 (110)
Confidence 456788999999999985432 3579998874321110010 01233443322 2499999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 84 G~Y~C~~~~ 92 (110)
T 1u3h_A 84 ATYFCAASA 92 (110)
Confidence 999999986
No 270
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.75 E-value=6.9e-05 Score=68.13 Aligned_cols=89 Identities=19% Similarity=0.297 Sum_probs=55.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCC-CC-CCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA-SM-ANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~-~L-a~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~D 345 (378)
...+.+.+|+++.|.|.....+ .. ..+.|.|+.++.......+.. ...+|+..... .|.|.+++.+|
T Consensus 41 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 120 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAED 120 (252)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCccc
Confidence 3567888999999999986554 10 025799998753221111110 01234433322 49999999999
Q ss_pred CeEEEEEeCCeee----EEEeeeecc
Q psy10772 346 AGKYDCWLGNTVL----CTHNLTVDA 367 (378)
Q Consensus 346 sG~Y~C~~~~~~l----~~~~~~v~~ 367 (378)
+|.|.|.+.+..- ....|+|..
T Consensus 121 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 121 LGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CEEEEEEEEcCCccEECCCEEEEEeC
Confidence 9999999987421 123566643
No 271
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.74 E-value=7.5e-05 Score=66.19 Aligned_cols=87 Identities=24% Similarity=0.239 Sum_probs=55.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-------------ccCcceEeec---C---ceEEe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-------------RSDKFIRTVD---G---GLVIM 339 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-------------~~~~~~~~~~---~---GLlI~ 339 (378)
..+.+.+|+++.|.|.....+. ..+.|.|+.+........+. . ...+|+.... . .|.|.
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~-~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 8 GGGLVQPGGSMKLSCVASGFTF-SNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCeEEEEEEEcCCcc-CCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4568889999999999875431 12579998875322111110 0 0124544331 2 59999
Q ss_pred eecCCCCeEEEEEeCCee----e--EEEeeeecc
Q psy10772 340 AVEELDAGKYDCWLGNTV----L--CTHNLTVDA 367 (378)
Q Consensus 340 ~v~~~DsG~Y~C~~~~~~----l--~~~~~~v~~ 367 (378)
+|+.+|+|.|.|.+.+.. . ..-.|+|..
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 120 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS 120 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEcc
Confidence 999999999999998741 2 235666664
No 272
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.74 E-value=3e-05 Score=67.97 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=50.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCC----CCCCCCeEEEEecccCceeeEee----------ccCcceEeecC------ceEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA----SMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTVDG------GLVI 338 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~----~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~~~------GLlI 338 (378)
.+.+.+.+|+++.|+|....+. ..+.+.|.|+.++.......+.. ...+|+....+ -|.|
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I 86 (214)
T 2zg1_A 7 QKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSI 86 (214)
T ss_dssp CSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEE
T ss_pred CcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEE
Confidence 3567889999999999987541 11235799998754211100100 11234444332 3999
Q ss_pred eeecCCCCeEEEEEeCCe
Q psy10772 339 MAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~~ 356 (378)
.+|+.+|+|.|.|.+.+.
T Consensus 87 ~~v~~~D~G~Y~C~~~~~ 104 (214)
T 2zg1_A 87 GDARMEDTGSYFFRVERG 104 (214)
T ss_dssp CSCCGGGCEEEEEEEEET
T ss_pred ccCCHhhCceEEEEEEcC
Confidence 999999999999998763
No 273
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.74 E-value=1.9e-05 Score=68.86 Aligned_cols=64 Identities=14% Similarity=0.229 Sum_probs=45.6
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
..+.+|+++.|.|....+. +.+.|+.++.. +. ...........|.|.+|+.+|+|.|.|.+.+.
T Consensus 108 ~~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~-----~~--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 171 (188)
T 1oll_A 108 PEVISGEKVTFYCRLDTAT----SMFLLLKEGRS-----SH--VQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYN 171 (188)
T ss_dssp SEEETTCEEEEEEECSSSC----SEEEEEEESSS-----CE--EEEEECSSEEEEEEEECCGGGCEEEEEECEEE
T ss_pred CccccCCEEEEEEEcCCCC----CEEEEEECCcc-----cc--ccccCCCceeEEEECCCCcCCCcEEEEEEEcC
Confidence 4578999999999975432 47899988764 22 11111112345999999999999999998764
No 274
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.74 E-value=9e-05 Score=70.86 Aligned_cols=84 Identities=18% Similarity=0.180 Sum_probs=54.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC--c-ee-eEee---ccCcceEee-------cCceEEeeecCCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK--G-RY-QIKF---RSDKFIRTV-------DGGLVIMAVEELD 345 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~--~-~~-~l~~---~~~~~~~~~-------~~GLlI~~v~~~D 345 (378)
+.+.+.+|+++.|.|.....+. +.|+|++++... + .. .+.. ....|+... ..-|.|.+++.+|
T Consensus 2 e~v~~~~G~~v~L~C~~~~~p~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 78 (363)
T 1wio_A 2 KVVLGKKGDTVELTCTASQKKS---IQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIED 78 (363)
T ss_dssp EEEEEETTSCEEECCCCTTCSS---CCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGG
T ss_pred CeEEEeCCCeEEEEEEecCCCc---eEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHH
Confidence 4578899999999999864433 689999886420 0 00 0000 012333221 2239999999999
Q ss_pred CeEEEEEeCCeeeEEEeeeecc
Q psy10772 346 AGKYDCWLGNTVLCTHNLTVDA 367 (378)
Q Consensus 346 sG~Y~C~~~~~~l~~~~~~v~~ 367 (378)
+|.|.|.+.+.. ....|.|..
T Consensus 79 ~G~Y~C~~~n~~-~~~~l~V~~ 99 (363)
T 1wio_A 79 SDTYICEVEDQK-EEVQLLVFG 99 (363)
T ss_dssp CEEEEEEETTEE-EEEEEEEEE
T ss_pred CEEEEEEEEECC-CcEEEEEEe
Confidence 999999999853 356666654
No 275
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.74 E-value=6.6e-05 Score=67.15 Aligned_cols=74 Identities=19% Similarity=0.232 Sum_probs=48.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe----------eccCcceEeec-----CceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK----------FRSDKFIRTVD-----GGLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~----------~~~~~~~~~~~-----~GLlI~~v~~ 343 (378)
...+.+.+|+++.|.|.. +. +.+.|.|+.+....+...+. .....|+.... .-|.|.+|+.
T Consensus 7 p~~~~v~~G~~v~L~C~~-~~---~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCNQ-TN---NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp CSEEEEETTCCEEEEEEE-CS---CCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred ccceEEeCCCEEEEEeec-CC---CCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 346789999999999993 33 23589999874221111110 00123443321 2399999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.+.
T Consensus 83 ~DsG~Y~C~~~~~ 95 (238)
T 2p1y_A 83 SQTSVYFCASGDL 95 (238)
T ss_dssp GGCEEEEEEEEC-
T ss_pred ccCeeEEEEEEeC
Confidence 9999999999874
No 276
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.73 E-value=0.00011 Score=66.31 Aligned_cols=85 Identities=15% Similarity=0.222 Sum_probs=53.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|...+.+. +.|.|+.+........+.. ..+.++..... -|.|.+++.+|+|
T Consensus 142 ~~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 218 (247)
T 2ghw_B 142 PATLSLSPGERATLSCRASQSVR---SNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFA 218 (247)
T ss_dssp CSEEEECTTSCEEEEEEESSCCT---TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCE
T ss_pred CCEEEecCCCcEEEEEEeCCCcc---ceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCE
Confidence 34567889999999999865543 5799998532211100100 01234333211 2999999999999
Q ss_pred EEEEEeCCee----eEEEeeeec
Q psy10772 348 KYDCWLGNTV----LCTHNLTVD 366 (378)
Q Consensus 348 ~Y~C~~~~~~----l~~~~~~v~ 366 (378)
.|.|.+.+.. =....|.|.
T Consensus 219 ~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 219 VYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEccCCCceEcCCEEEEEC
Confidence 9999998721 123456665
No 277
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.73 E-value=7.2e-05 Score=68.44 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=49.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----------ccCcceEeecC------ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVDG------GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~~------GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|...+.+ ++.+.|.|+.+....+...+.. ....|+....+ -|.|.+|+.
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p-~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFS-LTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CSEECTTSEEEEEEEEESSC-TTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CccccCCceEEEEEEEeccc-CCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 45688999999999986542 1235799998743211111100 01345444321 499999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.+.
T Consensus 88 ~DsG~Y~C~a~n~ 100 (257)
T 1f3r_B 88 DDTGTYYCTRDLY 100 (257)
T ss_dssp TCCEEEEEEEESS
T ss_pred ccCEEEEEEEccc
Confidence 9999999999875
No 278
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.73 E-value=0.00011 Score=66.09 Aligned_cols=87 Identities=20% Similarity=0.107 Sum_probs=55.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+. ..+.|.|+.+........|. .. ..+|+.... .-|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 8 GAELVKPGASVKLSCKASGYTF-TNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp SEEEECTTCCEEEEEEEESSCG-GGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEcCCCCEEEEEEecCCcc-ccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 3567889999999999864431 12479999875322211110 00 124544432 24999999
Q ss_pred cCCCCeEEEEEeCCeee----EEEeeeecc
Q psy10772 342 EELDAGKYDCWLGNTVL----CTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~l----~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+... ....|+|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSA 116 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECS
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcC
Confidence 99999999999976311 223677765
No 279
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.73 E-value=7.4e-05 Score=67.97 Aligned_cols=88 Identities=23% Similarity=0.171 Sum_probs=54.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe------------eccCcceEeecCc------eEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK------------FRSDKFIRTVDGG------LVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~------------~~~~~~~~~~~~G------LlI~~ 340 (378)
...+.+.+|+++.|.|...+.+ ++.+.|.|+.+........+. ....+|+....++ |.|.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 86 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFN-IKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSS 86 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSC-GGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCeeecCCCcEEEEEEeeCCc-ccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCC
Confidence 3457888999999999976422 223579998854322211110 0112344443222 99999
Q ss_pred ecCCCCeEEEEEeCCee----eEEEeeeecc
Q psy10772 341 VEELDAGKYDCWLGNTV----LCTHNLTVDA 367 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~~~----l~~~~~~v~~ 367 (378)
|+.+|+|.|.|.+.+.. -....|.|.+
T Consensus 87 v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 87 LTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 99999999999998721 1234566654
No 280
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=97.73 E-value=0.00014 Score=59.57 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=49.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~~------GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......|.|+.+...++...|-. . ..+|+....+ -|.|.+++
T Consensus 11 ~~~~~~G~~vtL~C~~~~~-~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 89 (123)
T 2p45_B 11 GGLVQAGGSLRLSCAASGY-AYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLK 89 (123)
T ss_dssp CEEEETTCCEEEEEEEESC-SSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCC
T ss_pred CEEEeCCCCEEEEEEecCc-cCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4678899999999998632 12234799998754322211211 0 1235554432 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 90 ~~Dsg~Y~C~~~~ 102 (123)
T 2p45_B 90 PEDTATYYCAAGG 102 (123)
T ss_dssp GGGCEEEEEEESS
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999875
No 281
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=97.73 E-value=4e-05 Score=61.31 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=48.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----cCcceEeec------CceEEeeecCCCCe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----SDKFIRTVD------GGLVIMAVEELDAG 347 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----~~~~~~~~~------~GLlI~~v~~~DsG 347 (378)
+.+.+.+|+++.|+|....... .+.+.|+.+........|-. . ..+|+.... -.|.|.+++.+|+|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG 81 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHR--TLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAG 81 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGT--TSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCE
T ss_pred cEEEEeCCCcEEEEeEecCCcC--CceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCE
Confidence 4678899999999999754321 23699988753211100110 0 123444332 14999999999999
Q ss_pred EEEEEeCCe
Q psy10772 348 KYDCWLGNT 356 (378)
Q Consensus 348 ~Y~C~~~~~ 356 (378)
.|.|...+.
T Consensus 82 ~Y~C~~~~~ 90 (110)
T 2q87_A 82 TYWCGVDTP 90 (110)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEecC
Confidence 999998764
No 282
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.72 E-value=8.4e-05 Score=67.60 Aligned_cols=96 Identities=19% Similarity=0.201 Sum_probs=54.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCC-CCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMA-NQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La-~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|.....+... ...+.|+.+........+.. ...+|+..... -|.|.+|+.+|+
T Consensus 140 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 219 (253)
T 3uzq_A 140 PASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDV 219 (253)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHC
Confidence 3457888999999999986543200 01799998743221110110 01133332222 299999999999
Q ss_pred eEEEEEeCCe----eeEEEeeeecccccCCCC
Q psy10772 347 GKYDCWLGNT----VLCTHNLTVDAHSNVADA 374 (378)
Q Consensus 347 G~Y~C~~~~~----~l~~~~~~v~~~~c~~~~ 374 (378)
|.|.|.+.+. -=..-.|.|.+..-.++.
T Consensus 220 G~Y~C~~~n~~~~~fg~gt~l~v~~~~~~~~~ 251 (253)
T 3uzq_A 220 ATYFCQRSNEVPWTFGGGTKLEIKRPLEHHHH 251 (253)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCC------
T ss_pred EEEEEEEccCCCcEECCCEEEEEcCCCCCccc
Confidence 9999999872 122445666666554443
No 283
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.72 E-value=9.4e-05 Score=61.00 Aligned_cols=74 Identities=24% Similarity=0.359 Sum_probs=48.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccC---cceEe---------ecCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD---KFIRT---------VDGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~---~~~~~---------~~~GLlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|...+.. +.+.|.|+.+.. ..+.-+....+ .|+.. ..--|.|.+|+.+|+
T Consensus 10 p~~~~v~~G~~vtL~C~~~~~~--~~~~v~W~r~~~-~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 86 (127)
T 2jju_A 10 EKSVSVAAGESATLRCAMTSLI--PVGPIMWFRGAG-AGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADA 86 (127)
T ss_dssp CSEEEEETTSCEEECCEESCCC--SCCCEEEEECSS-TTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGGC
T ss_pred CCeEEEeCCCCEEEEEEEeCCC--CCCEEEEEecCC-CCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHHC
Confidence 3567899999999999986431 234799988752 22211211111 13221 123499999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 87 G~Y~C~~~~ 95 (127)
T 2jju_A 87 GTYYCVKFR 95 (127)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999764
No 284
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.72 E-value=7.7e-05 Score=68.52 Aligned_cols=76 Identities=18% Similarity=0.135 Sum_probs=50.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+ ++.+.|.|+.+........|.. ..+.|+....+ -|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 8 GAELVKPGASVKLSCKASGYT-FTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCEEECTTCCEEEEEEECSSC-GGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeeecCCCcEEEEEEecccc-CCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 456888999999999986432 1235799998643211111110 11345544321 3999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~DsG~Y~C~~~n~ 101 (256)
T 1nqb_A 87 TSEDSAVYYCARYDY 101 (256)
T ss_dssp CGGGCEEEEEEECCT
T ss_pred ChhhCEEEEEEEeec
Confidence 999999999999975
No 285
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.72 E-value=5.6e-05 Score=72.41 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=56.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cC--ceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DG--GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~--GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.+ +......++... .. -|.|.+++..|+|.|.|.+.|
T Consensus 220 ~~~~~~~G~~v~l~C~~~g~p~---~~i~W~~~g~~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 291 (395)
T 1bih_A 220 KDMMAKAGDVTMIYCMYGSNPM---GYPNYFKNGKD-----VNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDN 291 (395)
T ss_dssp CSEEEETTSCEEEEEEEECSSC---CCCEEEETTEE-----CCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECC
T ss_pred CceEEECCCcEEEEEEeccCCC---CeEEEEECCEE-----cCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEe
Confidence 4577889999999999865544 57999998754 321122232221 12 499999999999999999998
Q ss_pred e---eeE-EEeeeeccc
Q psy10772 356 T---VLC-THNLTVDAH 368 (378)
Q Consensus 356 ~---~l~-~~~~~v~~~ 368 (378)
. ... +..|.|...
T Consensus 292 ~~g~~~~~~~~l~V~~~ 308 (395)
T 1bih_A 292 GVGKPQKHSLKLTVVSA 308 (395)
T ss_dssp SSSSCEEEEEEEEEEEE
T ss_pred CCCCceEEEEEEEEEcC
Confidence 2 233 667777643
No 286
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.72 E-value=0.0001 Score=64.03 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=52.9
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeec-CceEEeeecCCCCe
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVD-GGLVIMAVEELDAG 347 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~-~GLlI~~v~~~DsG 347 (378)
.+.+.+|+++.|.|.....+ .+.++|+.+.......++. . .-..|+.... ..|.|.+++..|+|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G 84 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLA---LGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMG 84 (208)
T ss_dssp SSEEETTCCEEEEEECCCSS---CSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCE
T ss_pred cceeecCCcEEEEEeCCCCC---ceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCe
Confidence 45788999999999954332 2479998654321111110 0 0122333333 35999999999999
Q ss_pred EEEEEeCCe----eeEEEeeeecc
Q psy10772 348 KYDCWLGNT----VLCTHNLTVDA 367 (378)
Q Consensus 348 ~Y~C~~~~~----~l~~~~~~v~~ 367 (378)
.|.|.+.+. .-....|.|..
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVHQ 108 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEEC
T ss_pred EEEEEEEcccCceeEEEEEEEecc
Confidence 999999873 34555666654
No 287
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.71 E-value=9.4e-05 Score=67.40 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=49.2
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-e-----------eccCcceEeecCc------eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-K-----------FRSDKFIRTVDGG------LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~-----------~~~~~~~~~~~~G------LlI~~v~ 342 (378)
.+.+.+|+++.|.|...+.+ +..+.|.|+.+........+ . ....+|+....++ |.|.+|+
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYT-FTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEEeccc-ccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 45688999999999986432 12357999876432221111 0 0122344443222 9999999
Q ss_pred CCCCeEEEEEeCCe
Q psy10772 343 ELDAGKYDCWLGNT 356 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~ 356 (378)
.+|+|.|.|.+.+.
T Consensus 90 ~~DsG~Y~C~~~~~ 103 (256)
T 3umt_A 90 SEDSAVYYCARDDR 103 (256)
T ss_dssp GGGCEEEEEEECCS
T ss_pred cccCEEEEEEEccC
Confidence 99999999999875
No 288
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=97.71 E-value=4.8e-05 Score=63.11 Aligned_cols=87 Identities=13% Similarity=0.162 Sum_probs=53.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c----------cCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R----------SDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~----------~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|............+.|+.+...++...|-. . ..+|+.... . -|.|.+++.
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 88 (126)
T 2h32_A 9 AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQP 88 (126)
T ss_dssp EEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCCCh
Confidence 5788999999999998643112224699998754322211211 0 123554431 1 399999999
Q ss_pred CCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 344 LDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 344 ~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
+|+|.|.|...+ +..+...|.|..
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~t~l~v~~ 115 (126)
T 2h32_A 89 EDEAMYYCAMGARSSEKEEREREWEEE 115 (126)
T ss_dssp GGCEEEEEEEECSCCCCCCTTCC----
T ss_pred hHCEEEEEEEEcCCCCcceeEEEeecc
Confidence 999999999876 334444555533
No 289
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=97.71 E-value=3.7e-05 Score=73.66 Aligned_cols=70 Identities=26% Similarity=0.458 Sum_probs=53.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.++|++++.+ |. . .+.-|.|.+++.+|+|.|.|.+.| .
T Consensus 315 ~~~~v~~g~~~~l~C~~~g~p~---p~i~W~~~g~~-----i~--~------~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 378 (388)
T 2v5m_A 315 PTQTVDFGRPAVFTCQYTGNPI---KTVSWMKDGKA-----IG--H------SESVLRIESVKKEDKGMYQCFVRNDRES 378 (388)
T ss_dssp SEEEECTTSCEEEEEEEEEECC---CEEEEEETTEE-----CS--C------CSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CcEEecCCCCEEEEEEeccccC---CeEEEEECCEE-----Cc--c------CCCEEEEecCChhhCEEEEEEEEcCCCc
Confidence 4567888999999999876544 58999998754 42 1 234589999999999999999988 5
Q ss_pred eeEEEeeee
Q psy10772 357 VLCTHNLTV 365 (378)
Q Consensus 357 ~l~~~~~~v 365 (378)
.-++..|.|
T Consensus 379 ~~~~~~l~V 387 (388)
T 2v5m_A 379 AEASAELKL 387 (388)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 566666655
No 290
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=97.71 E-value=5.9e-05 Score=70.97 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=50.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec---cCcceE---------eecCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR---SDKFIR---------TVDGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~---~~~~~~---------~~~~GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|...+.. +.+.|+|+.++.+... .+... ...|+. .....|.|.+++.+|+
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~--p~~~v~W~k~~~~~~~-~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~ 86 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLI--PVGPIQWFRGAGPARE-LIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADA 86 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCC--SCCCEEEEESCSTTCE-EEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGC
T ss_pred CCceEEecCCcEEEEEEccCcC--CCceEEEEECCCCCce-EEEEcCCCCcceeeeecccccccCceeEEEEccCccccC
Confidence 4678899999999999986541 2358999988654211 11110 011333 2233599999999999
Q ss_pred eEEEEEeCCe
Q psy10772 347 GKYDCWLGNT 356 (378)
Q Consensus 347 G~Y~C~~~~~ 356 (378)
|.|.|.+.+.
T Consensus 87 G~Y~C~a~n~ 96 (327)
T 2wng_A 87 GTYYCVKFRK 96 (327)
T ss_dssp EEEEEEEEES
T ss_pred eEEEEEeecC
Confidence 9999998763
No 291
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.71 E-value=6.5e-05 Score=67.73 Aligned_cols=88 Identities=19% Similarity=0.147 Sum_probs=55.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe------------eccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK------------FRSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~------------~~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.|.|+.+........+. .....|+....+ -|.|.+|
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAF-SSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEecCCcEEEEEEeccccC-CCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 3578889999999999875431 12479998864322111010 011234443321 2999999
Q ss_pred cCCCCeEEEEEeCCe--ee---EEEeeeeccc
Q psy10772 342 EELDAGKYDCWLGNT--VL---CTHNLTVDAH 368 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~--~l---~~~~~~v~~~ 368 (378)
+.+|+|.|.|.+.+. .. ....|+|...
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~ 120 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSG 120 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSC
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecc
Confidence 999999999999875 11 1236777643
No 292
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.71 E-value=8.1e-05 Score=69.80 Aligned_cols=99 Identities=16% Similarity=0.233 Sum_probs=54.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCC---CCCeEEEEecccCceeeEeec-------cCcceEeecC----ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMA---NQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDG----GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La---~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~----GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|.....+... .+.+.|+.+........+... .++|+..... -|.|.+++.+
T Consensus 166 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 245 (291)
T 2gki_A 166 PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAE 245 (291)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHH
Confidence 3467889999999999986443210 027999987422111111100 1334433222 3999999999
Q ss_pred CCeEEEEEeCCeeeE----EEeeeecccccCCCCCCC
Q psy10772 345 DAGKYDCWLGNTVLC----THNLTVDAHSNVADAPTR 377 (378)
Q Consensus 345 DsG~Y~C~~~~~~l~----~~~~~v~~~~c~~~~~~~ 377 (378)
|+|.|.|.+.+.... .-.|.|..+.=.-|++.+
T Consensus 246 DsG~Y~C~a~~~~~~~fg~gt~l~v~~~~~~~~~~~~ 282 (291)
T 2gki_A 246 DLAVYYCKQSYYHMYTFGSGTKLEIKHHHHHGLVPRG 282 (291)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEECC---------
T ss_pred HCEEEEEEEccCCceEEcCCEEEEEEeeEcCCCceee
Confidence 999999999873222 224555555444555544
No 293
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.70 E-value=0.00017 Score=58.97 Aligned_cols=90 Identities=18% Similarity=0.246 Sum_probs=55.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec---C---ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD---G---GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~---~---GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|+|............+.|+.+...++...|-.. ..+|+.... . -|.|.+++.+|
T Consensus 7 p~~v~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~D 86 (117)
T 1xed_A 7 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDD 86 (117)
T ss_dssp CSEEEEETTCCEEEEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCeEEEecCCCEEEEeEecCCcCCCCceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChHH
Confidence 3567899999999999975321000136899987543221112110 123443321 2 29999999999
Q ss_pred CeEEEEEeCC---eeeEEEeeeeccc
Q psy10772 346 AGKYDCWLGN---TVLCTHNLTVDAH 368 (378)
Q Consensus 346 sG~Y~C~~~~---~~l~~~~~~v~~~ 368 (378)
+|.|.|.... .+.-.=.++|.+|
T Consensus 87 sG~Y~C~v~~~~~~l~f~~~~~~~~~ 112 (117)
T 1xed_A 87 SGRYKCGLGINSRGLSFDVSLEVLEH 112 (117)
T ss_dssp CEEEEEEESCGGGCCEEEEEEEEECC
T ss_pred CEEEEEEEEeCCCCeeEEEEEEEeee
Confidence 9999999986 4666677777765
No 294
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.70 E-value=4.8e-05 Score=68.06 Aligned_cols=75 Identities=21% Similarity=0.217 Sum_probs=50.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-------eccCcceEee------cCceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-------FRSDKFIRTV------DGGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-------~~~~~~~~~~------~~GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|...+.+. +.|.|+.+........|. ...++++... ..-|.|.+++.+|
T Consensus 134 p~~~~v~~G~~v~L~C~~~~~p~---~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 210 (238)
T 2p1y_A 134 PQSLTVWEGETAILNCSYENSAF---DYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGD 210 (238)
T ss_dssp CSEEEEETTSCEEEEEECCCTTC---CEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGG
T ss_pred CceEEEeCCCeEEEEEEEecCCC---CcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHH
Confidence 35577899999999999865433 589999875321111110 0123344432 1249999999999
Q ss_pred CeEEEEEeCCe
Q psy10772 346 AGKYDCWLGNT 356 (378)
Q Consensus 346 sG~Y~C~~~~~ 356 (378)
+|.|.|.+.|.
T Consensus 211 ~G~Y~C~a~n~ 221 (238)
T 2p1y_A 211 SATYFCAAIDT 221 (238)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEeeC
Confidence 99999999863
No 295
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=97.70 E-value=0.00014 Score=61.59 Aligned_cols=96 Identities=16% Similarity=0.111 Sum_probs=54.9
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 87 (139)
T 2d7t_H 9 AEVKKPGASVKVSCKASGY-TFTGNYMHWVRQAPGQGLEYMGWINPKSGDTNYAQKFQGRVTMTRDTSISTVYMEVRRLR 87 (139)
T ss_dssp CEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCCEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEEeCC-cccCCEEEEEEECCCCCCEEEEEEEcCCCceeeCcccCCeEEEEEeCCCCEEEEEECcCC
Confidence 3578889999999998532 11223699998864333221211 1 123554432 2 29999999
Q ss_pred CCCCeEEEEEeCCee----eEEEeeeecccccCCCCCCC
Q psy10772 343 ELDAGKYDCWLGNTV----LCTHNLTVDAHSNVADAPTR 377 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~~----l~~~~~~v~~~~c~~~~~~~ 377 (378)
.+|+|.|.|...+.. -..-.|+|.+.+-..|.+.|
T Consensus 88 ~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~~~~~~~~~~ 126 (139)
T 2d7t_H 88 SDDTAVYYCATGWWGMDVWGQGTLVTVSSASEQKLISKE 126 (139)
T ss_dssp GGGCEEEEEEECSSSCCEECCCEEEEECC----------
T ss_pred HHHCEEEEEEEeeCCcCEECCCEEEEEecccCCCccccc
Confidence 999999999987521 12347788777666665543
No 296
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.70 E-value=3.2e-05 Score=65.43 Aligned_cols=60 Identities=18% Similarity=0.317 Sum_probs=44.8
Q ss_pred EEEEeCCeeeeeeeecc-CCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 282 QTVTWGQSVHLSCFVKL-PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~-~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+|+++.|.|.... ++. +.++|+.++.. +.. ......|.|.+++.+|+|.|.|.+.|
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~g~~-----~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~n 155 (170)
T 3ry4_A 95 LEFQEGETIMLRCHSWKDKPL---VKVTFFQNGKS-----QKF------SHLDPTFSIPQANHSHSGDYHCTGNI 155 (170)
T ss_dssp SEECTTCCEEEEEEEGGGCCE---EEEEEEETTEE-----EEE------ESSCCEEEESSCCGGGCEEEEEEEEE
T ss_pred ceeecCCeEEEEEECCCCCCC---ceEEEEECCeE-----ccc------cCCCCeEEEEeccccCCEEEEEEEEe
Confidence 35678999999999842 322 47999987653 431 11245699999999999999999987
No 297
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.70 E-value=9.3e-05 Score=61.18 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=49.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee---c---CceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV---D---GGLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~---~---~GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+.+|+++.|.|...... .+.+.|.|+.+........+ +..++|+... . --|.|.+++.+|+|.|.|.
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~~-~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 84 (121)
T 2i24_N 7 PQRITKETGESLTINCVVRDSR-CVLSTGYWYRKPPGSRNEES-ISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCK 84 (121)
T ss_dssp CSEEEEETTCCEEEEEEECSCC-CCEEEEEEEEECTTCSCCEE-ECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred CcEEEEecCCcEEEEeEccCCC-CCCCEEEEEEeCCCCCceee-EecCCCeEEEecCCCCEEEEEECCCChhhCEEEEEE
Confidence 3467889999999999985432 22247999987533221112 1233444321 1 1399999999999999998
Q ss_pred eC
Q psy10772 353 LG 354 (378)
Q Consensus 353 ~~ 354 (378)
+.
T Consensus 85 ~~ 86 (121)
T 2i24_N 85 PE 86 (121)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 298
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.69 E-value=8.3e-05 Score=67.53 Aligned_cols=75 Identities=19% Similarity=0.317 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeecCc----eEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVDGG----LVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~G----LlI~~v~~~DsG~ 348 (378)
..+.+.+|+++.|.|..... .++.+.+.|+.+........+... ..+|+.....+ |.|.+|+.+|+|.
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSS-NIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp SEEEECTTCCEEEEEECCTT-TTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CcEEEcCCCcEEEEEecCCC-CCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 35788999999999998643 223458999986432211111100 12344333332 9999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.+
T Consensus 89 Y~C~~~~ 95 (256)
T 3ux9_B 89 YYCQVRD 95 (256)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
No 299
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=97.69 E-value=6.2e-05 Score=65.32 Aligned_cols=78 Identities=21% Similarity=0.326 Sum_probs=52.1
Q ss_pred EEEEeCCeeeeeee-eccCCCCCCCCeEEEEecc-cCceeeEeecc-------CcceEe--ecCceEEeeecCCCCeEEE
Q psy10772 282 QTVTWGQSVHLSCF-VKLPASMANQPMSWYHYSK-DKGRYQIKFRS-------DKFIRT--VDGGLVIMAVEELDAGKYD 350 (378)
Q Consensus 282 ~~~~~G~s~~L~C~-~r~~~~La~~~v~W~~~~~-~~~~~~l~~~~-------~~~~~~--~~~GLlI~~v~~~DsG~Y~ 350 (378)
..+.+|+++.|.|. ..+.+ .|.++|+.++. + |.... ..++.. ...-|.|.+++..|+|.|.
T Consensus 114 ~~~~~g~~~~l~C~~~~~~p---~~~i~W~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 185 (212)
T 1f97_A 114 SSVTIGNRAVLTCSEHDGSP---PSEYSWFKDGISM-----LTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYY 185 (212)
T ss_dssp SEEETTSCEEEEEECSCCBS---CCEEEEEETTEES-----BC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEE
T ss_pred cccCCCCeEEEEEEcccCcC---CCEEEEEeCCccc-----ccccccccccccCceeEecCCCceEEEEecChhhCcEEE
Confidence 46788999999998 44433 36899999876 4 22100 011222 2445999999999999999
Q ss_pred EEeCC---e--eeEEEeeeecc
Q psy10772 351 CWLGN---T--VLCTHNLTVDA 367 (378)
Q Consensus 351 C~~~~---~--~l~~~~~~v~~ 367 (378)
|.+.| . .-....|+|.+
T Consensus 186 C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 186 CQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp EEEECSSSCCEECCCEEEEEES
T ss_pred EEEccccCCccccceEEEEEEE
Confidence 99998 2 23445565554
No 300
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.69 E-value=8.5e-05 Score=67.26 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=50.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC--CCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM--ANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L--a~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|...+.+.. ..+.|.|+.+........+.. ....|+..... .|.|.+++.+|
T Consensus 45 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 124 (254)
T 2c1o_A 45 PLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAED 124 (254)
T ss_dssp CSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCccc
Confidence 456789999999999998655410 025799998643211100100 01234433222 49999999999
Q ss_pred CeEEEEEeCCe
Q psy10772 346 AGKYDCWLGNT 356 (378)
Q Consensus 346 sG~Y~C~~~~~ 356 (378)
+|.|.|.+.+.
T Consensus 125 ~G~Y~C~a~n~ 135 (254)
T 2c1o_A 125 LGIYYCVQGSH 135 (254)
T ss_dssp CSEEEEEECSS
T ss_pred CEEEEEEEEcC
Confidence 99999999874
No 301
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.69 E-value=6.3e-05 Score=68.68 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=44.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc-------------CcceEeec-----CceEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-------------DKFIRTVD-----GGLVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~-------------~~~~~~~~-----~GLlI~~ 340 (378)
...+.+.+|+++.|.|.....+ .+.|.|+.+....+...+.... +.+..... .-|.|.+
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 85 (259)
T 3omz_A 9 TKSVIRQTGSSAEITCDLAEGS---TGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRN 85 (259)
T ss_dssp --CEEEETTCCEEEECCC--------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESS
T ss_pred CceeEecCCCcEEEEEEEccCC---CcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECC
Confidence 3567899999999999986544 3579998864322211111000 11222111 1299999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
|+.+|+|.|.|.+.+
T Consensus 86 v~~~DsG~Y~C~~~~ 100 (259)
T 3omz_A 86 LIENDSGVYYCATWD 100 (259)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CCcccCEEEEEEEee
Confidence 999999999999976
No 302
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.69 E-value=9.5e-05 Score=59.81 Aligned_cols=74 Identities=19% Similarity=0.312 Sum_probs=48.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c----------cCcceEeec-C---ceEEeeecCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R----------SDKFIRTVD-G---GLVIMAVEEL 344 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~----------~~~~~~~~~-~---GLlI~~v~~~ 344 (378)
..+.+.+|+++.|.|...... ....|.|+.+...++...|-. . -.+|+.... . -|.|.+++.+
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~--~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~ 86 (115)
T 2otu_A 9 SSASFSLGASAKLTCTLSSQH--STYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPE 86 (115)
T ss_dssp CCEECCTTCCEEEEEEECGGG--TTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCEEECCCCCEEEEEEecCCC--CCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCCChh
Confidence 456788999999999986432 224799998753322211210 0 023544332 2 3999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|...+
T Consensus 87 Dsg~Y~C~~~~ 97 (115)
T 2otu_A 87 DEAIYICGVGD 97 (115)
T ss_dssp GCEEEEEEEEE
T ss_pred HCEEEEEEEec
Confidence 99999999864
No 303
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.69 E-value=6.1e-05 Score=69.04 Aligned_cols=80 Identities=15% Similarity=0.148 Sum_probs=56.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+.+|+++.|.|....|.. .+.++|+.++.. .+. .+.++. ....+|.|.+++..|+|.|.|.+.+
T Consensus 97 ~~~~v~~g~~v~l~C~~~~~~~--~~~v~W~~~~~~----~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 168 (292)
T 4dkd_C 97 QEVVVFEDQDALLPCLLTDPVL--EAGVSLVRVRGR----PLM--RHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGR 168 (292)
T ss_dssp SEEEEETTSCEECCEEESSGGG--GSSEEEEEGGGC----CCC--SSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTS
T ss_pred CeEEEcCCCcEEEeeeCCCCCc--ceeEEEEecCCC----ccc--cCCcccccCCceEEECCCCHHHCeEEEEEEEeCCC
Confidence 4577889999999999876431 137999987432 121 233333 3355699999999999999999986
Q ss_pred -eeeEEEeeeecc
Q psy10772 356 -TVLCTHNLTVDA 367 (378)
Q Consensus 356 -~~l~~~~~~v~~ 367 (378)
..-....|.|..
T Consensus 169 ~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 169 KVMSISIRLKVQK 181 (292)
T ss_dssp CEECCCEEEEEEC
T ss_pred ceeEEEEEEEEeC
Confidence 222366777765
No 304
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=97.69 E-value=0.00012 Score=65.00 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=50.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-------------ccCcceEeecCc------eEEe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-------------RSDKFIRTVDGG------LVIM 339 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-------------~~~~~~~~~~~G------LlI~ 339 (378)
..+.+.+|+++.|.|.....+ ...+.|.|+.+....+...+- . ...+|+....++ |.|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFT-LSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSC-GGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred CCEEEcCCCCEEEEEEccccc-ccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 346788999999999986432 223579998865332211110 0 112455544333 9999
Q ss_pred eecCCCCeEEEEEeCCe
Q psy10772 340 AVEELDAGKYDCWLGNT 356 (378)
Q Consensus 340 ~v~~~DsG~Y~C~~~~~ 356 (378)
+|+.+|+|.|.|.+.+.
T Consensus 87 ~v~~~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGD 103 (221)
T ss_dssp SCCGGGCEEEEEEEESC
T ss_pred CCCHHHCEEEEEEEECC
Confidence 99999999999999764
No 305
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.69 E-value=0.00013 Score=64.06 Aligned_cols=89 Identities=21% Similarity=0.330 Sum_probs=55.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCC--CCCCCeEEEEeccc-----CceeeEe---eccCcceEeecC-------ceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPAS--MANQPMSWYHYSKD-----KGRYQIK---FRSDKFIRTVDG-------GLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~--La~~~v~W~~~~~~-----~~~~~l~---~~~~~~~~~~~~-------GLlI~~v 341 (378)
.+.+.+.+|+++.|.|...+.+. ...+.|+|+.++.. .+..... .....|.....+ .|.|.+|
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 45678899999999999643222 11237999886421 0000000 001123333222 5999999
Q ss_pred cCCCCeEEEEEeCC--eeeEEEeeeecc
Q psy10772 342 EELDAGKYDCWLGN--TVLCTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~--~~l~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+ .......|.|.+
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~ 115 (222)
T 3sbw_C 88 KLQDAGVYRCMISYGGADYKRITVKVNA 115 (222)
T ss_dssp CGGGCEEEEEEEESSSEEEEEEEEEEEB
T ss_pred ccccCeEEEEEEEeCCCceeEEEEEEEC
Confidence 99999999999986 445566777764
No 306
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.68 E-value=3.4e-05 Score=69.52 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=45.1
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcce--EeecC--ceEEeeecCCCCeEEEEEeCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI--RTVDG--GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~--~~~~~--GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+|+++.|.|....+ .+.+.|+.++.. +.. ..... ..... -|.|.+|+.+|+|.|.|.+.+
T Consensus 18 ~~v~~G~~vtL~C~~~~~----~~~~~W~k~g~~-----~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 18 PVIPLDGSVKIQCQAIRE----AYLTQLMIIKNS-----TYR-EIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp SEEETTCCEEEEECCCTT----CSEEEEEEEETT-----EEE-ECSEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CccCCCCCEEEEEEcCCC----CCEEEEEECCCc-----ccc-cccccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 367889999999998643 247999998765 321 11111 11122 599999999999999999987
No 307
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=97.68 E-value=2.3e-05 Score=75.02 Aligned_cols=63 Identities=29% Similarity=0.469 Sum_probs=49.0
Q ss_pred EeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecC-CCCeEEEEEeCC
Q psy10772 285 TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEE-LDAGKYDCWLGN 355 (378)
Q Consensus 285 ~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~-~DsG~Y~C~~~~ 355 (378)
.+|+++.|.|...+.+. +.++|+.++.+ |....+.++...+..|+|.++.. .|+|.|.|.+.|
T Consensus 20 ~~g~~v~l~C~~~g~p~---~~v~W~k~g~~-----~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 83 (382)
T 1cs6_A 20 SAEEKVTLTCRARANPP---ATYRWKMNGTE-----LKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATN 83 (382)
T ss_dssp CSCCEEEECCEEEEESC---CEEEEEETTEE-----CCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEE
T ss_pred CCCCcEEEEEEecCCCC---CEEEEEECCEE-----CCcCCCccEEeeCCeEEEecccccccCEEEEEEEEc
Confidence 68999999999875433 58999998754 43223445666667799999997 999999999987
No 308
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.68 E-value=5.6e-05 Score=63.89 Aligned_cols=72 Identities=24% Similarity=0.317 Sum_probs=50.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe-eeE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT-VLC 359 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~-~l~ 359 (378)
.+.+.+|+++.|.|.....+. .+.++|+.++.+ +. . ....|+|.+++.+|+|.|.|.+.+. .-.
T Consensus 13 ~~~v~~G~~v~l~C~~~~~p~--~~~~~W~~~g~~-----~~--~------~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~ 77 (170)
T 3ry4_A 13 WINVLQEDSVTLTCQGARSPE--SDSIQWFHNGNL-----IP--T------HTQPSYRFKANNNDSGEYTCQTGQTSLSD 77 (170)
T ss_dssp CSEEETTCEEEEEEESCCCSS--SSCEEEEETTEE-----CT--T------CCSSEEEEECCGGGCEEEEEEETTSBCCC
T ss_pred CeEEECCCcEEEEEEecCCCC--cceEEEEECCeE-----cc--c------CccceEEEecccccCeEEEEEEeCCCceE
Confidence 346788999999999865431 247999987653 32 1 1356788999999999999999872 223
Q ss_pred EEeeeecc
Q psy10772 360 THNLTVDA 367 (378)
Q Consensus 360 ~~~~~v~~ 367 (378)
...|.|..
T Consensus 78 ~~~l~v~~ 85 (170)
T 3ry4_A 78 PVHLTVLF 85 (170)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEEC
Confidence 34455543
No 309
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=97.68 E-value=0.00017 Score=60.37 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=59.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--------ccCcceEee---cC---ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--------RSDKFIRTV---DG---GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--------~~~~~~~~~---~~---GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|....... ...+.|+.+...++...|-. ...+|+... .. -|.|.+++.+
T Consensus 16 p~~v~v~~G~~vtL~C~~~~~~~--~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~ 93 (134)
T 3bik_B 16 PAWLTVSEGANATFTCSLSNWSE--DLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRN 93 (134)
T ss_dssp CSEEEEETTSCEEEEEEESSCCT--TCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCCGG
T ss_pred CCeEEEeCCCCEEEEEEeCCCCC--CcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCChH
Confidence 45678999999999999864321 23699998854322211210 123455443 12 3999999999
Q ss_pred CCeEEEEEeCCee-------eEEEeeeecccccCCCCCC
Q psy10772 345 DAGKYDCWLGNTV-------LCTHNLTVDAHSNVADAPT 376 (378)
Q Consensus 345 DsG~Y~C~~~~~~-------l~~~~~~v~~~~c~~~~~~ 376 (378)
|+|.|.|...+.. -....|+|.+..-.+|+.+
T Consensus 94 Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~~~~P~~~ 132 (134)
T 3bik_B 94 DSGIYLCGAISLHPKAKIEESPGAELVVTERILETSTRY 132 (134)
T ss_dssp GCEEEEEEEEECSSSCEEEECCCEEEEEECCC-------
T ss_pred HCEEEEEEEEeCCCCceEEEcCCEEEEEeCCCCCCCCcC
Confidence 9999999986421 2356888887776777654
No 310
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.68 E-value=0.00011 Score=75.40 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=58.2
Q ss_pred eeEEEEeCCeeeeeeeec-cCCCCCCCCeEEEEecccCc---eeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKG---RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~---~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|... +.+. |.|+|++++.... .++.....+.+......-|.|.+++.+|+|.|.|.+.|
T Consensus 235 ~~~~v~~G~~v~L~C~~~~g~p~---p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N 311 (527)
T 3qs9_E 235 PQLFLKVGEPLWIRCKAVHVNHG---FGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311 (527)
T ss_dssp CEEEECTTSCEEEEEEEEESSSC---CCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETT
T ss_pred CceEEeCCCeEEEEEEEccCCCC---eEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEe
Confidence 467788999999999985 4433 6899999876411 10010001111122223499999999999999999999
Q ss_pred eeeEEEeeeecccc
Q psy10772 356 TVLCTHNLTVDAHS 369 (378)
Q Consensus 356 ~~l~~~~~~v~~~~ 369 (378)
..-++..|+|....
T Consensus 312 ~~~~~~~L~V~~~p 325 (527)
T 3qs9_E 312 HPSQSALVTIVEKG 325 (527)
T ss_dssp EEEEEEEEEEC--C
T ss_pred CCCceEEEEEEccC
Confidence 87777778776544
No 311
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=97.67 E-value=0.00011 Score=70.24 Aligned_cols=84 Identities=23% Similarity=0.340 Sum_probs=58.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
+...+.+|+++.|.|...+.+. |.++|+.++...... .....+.++.....-|.|.+++..|+|.|.|.+.| .
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~---p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 295 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPA---PSFRWYKFIEGTTRK-QAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG 295 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESC---CEEEEEEECTTSSCE-EECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred CceEEeeCCcEEEEEECCCCCC---CEEEEEecCCCCccc-ccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCc
Confidence 3456788999999999865433 589999985431110 11123445555667799999999999999999987 4
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-....|.|..
T Consensus 296 ~~~~~~l~V~~ 306 (388)
T 2v5m_A 296 ESVETVLTVTA 306 (388)
T ss_dssp EEEEEEEEEEE
T ss_pred eeEEEEEEEeC
Confidence 44555666654
No 312
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=97.67 E-value=7.3e-05 Score=71.69 Aligned_cols=79 Identities=29% Similarity=0.459 Sum_probs=57.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc-ceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK-FIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~-~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.+ +. .+. ++.....-|.|.+++..|+|.|.|.+.|
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~---~~v~W~~~~~~-----~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 299 (404)
T 3p3y_A 230 SSQMVLRGMDLLLECIASGVPT---PDIAWYKKGGD-----LP--SDKAKFENFNKALRITNVSEEDSGEYFCLASNKMG 299 (404)
T ss_dssp EEEEEETTSCEEEECCBCCSSC---CEEEEEETTBC-----CC--TTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSC
T ss_pred CCceEecCCCEEEEEEECCCCC---CcEEEEECCEE-----CC--CCcccccccCceEEEccCCHhHCEEEEEEEEeCCC
Confidence 4577889999999998865433 58999998765 32 222 2233345699999999999999999987
Q ss_pred eeeEEEeeeeccc
Q psy10772 356 TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ~~l~~~~~~v~~~ 368 (378)
..-.+..|.|...
T Consensus 300 ~~~~~~~l~V~~~ 312 (404)
T 3p3y_A 300 SIRHTISVRVKAA 312 (404)
T ss_dssp EEEEEEEEEEEEE
T ss_pred cEEEEEEEEEeCC
Confidence 4455666666543
No 313
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.67 E-value=0.0001 Score=66.17 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=47.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEeecC-----ceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTVDG-----GLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~~~-----GLlI~~v~~ 343 (378)
.+.+.+.+|+++.|.|.... +.+.|.|+.+........+.. ...+|+....+ -|.|.+|+.
T Consensus 9 p~~v~v~~G~~v~L~C~~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~ 84 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPIS----GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALEL 84 (240)
T ss_dssp CSEEEEETTCCEEEEEECCT----TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCG
T ss_pred cceeeecCCCcEEEEEEeCC----CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCCh
Confidence 35678999999999998754 234899988543221111100 01134433322 299999999
Q ss_pred CCCeEEEEEeC
Q psy10772 344 LDAGKYDCWLG 354 (378)
Q Consensus 344 ~DsG~Y~C~~~ 354 (378)
+|+|.|.|.+.
T Consensus 85 ~D~G~Y~C~~~ 95 (240)
T 3q5y_A 85 EDSAMYFCASS 95 (240)
T ss_dssp GGCEEEEEEEE
T ss_pred hHCEEEEEEEc
Confidence 99999999995
No 314
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.67 E-value=5.7e-05 Score=68.60 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=48.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-ee-----------ccCcceEeecC-c-----eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-KF-----------RSDKFIRTVDG-G-----LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~~-----------~~~~~~~~~~~-G-----LlI~~v~ 342 (378)
...+.+|+++.|.|...+.+. +.+.+.|+.+........+ .. ...+|+....+ . |.|.+++
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTF-SSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCG-GGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEEcCCCeEEEEEEEeCCcc-cccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 356888999999999865321 1357999987432221111 00 11224443322 2 9999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 222 ~~DsG~Y~C~~~~ 234 (256)
T 3ux9_B 222 AEDTAVYYCARYI 234 (256)
T ss_dssp GGGCEEEEEEEEE
T ss_pred hhhCEEEEEEEEc
Confidence 9999999999986
No 315
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.67 E-value=1.7e-05 Score=69.34 Aligned_cols=65 Identities=20% Similarity=0.332 Sum_probs=45.2
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|...++. +.+.|+.++...... .. ..........|.|.+++.+|+|.|.|.+.|
T Consensus 15 ~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~~~~~-~~---~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTLEA----REYRLDKEESPAPWD-RQ---NPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp EEETTCCEEEEEECCTTC----CEEEEEETTSCSCSE-EE---CCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCCCcEEEEeeCCCCC----CEEEEEECCCCCccc-cc---ccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 678899999999986542 479999887652110 00 000001234599999999999999999876
No 316
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=97.66 E-value=5.7e-05 Score=67.14 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=55.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
.....+..|+++.|.|...+.+. |.++|+.++.. +. .+ ...-|.|.+++.+|+|.|.|.+.|
T Consensus 125 ~~~~~v~~G~~v~L~C~~~g~p~---~~v~W~~~~~~-----~~--~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g 189 (218)
T 3k0w_A 125 PTSQKLMPGSTLVLQCVAVGSPI---PHYQWFKNELP-----LT--HE-----TKKLYMVPYVDLEHQGTYWCHVYNDRD 189 (218)
T ss_dssp CCCEEECTTCCEEEECEEEBSSC---CEEEEEETTEE-----CT--TC-----CSSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred CCceeecCCCcEEEEEEecccCC---CeEEEEECCEE-----CC--CC-----CCCEEEEeecChhcCEEEEEEEEcCCC
Confidence 34567888999999999865543 68999987653 32 22 124599999999999999999998
Q ss_pred -eeeEEEeeeecccc
Q psy10772 356 -TVLCTHNLTVDAHS 369 (378)
Q Consensus 356 -~~l~~~~~~v~~~~ 369 (378)
..-....|.|++..
T Consensus 190 ~~~s~~~~l~V~~~~ 204 (218)
T 3k0w_A 190 SQDSKKVEIIIDELN 204 (218)
T ss_dssp EEECCCEEEEECC--
T ss_pred CceeeeEEEEEeCCc
Confidence 24556777777644
No 317
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=97.66 E-value=3.1e-05 Score=68.06 Aligned_cols=69 Identities=20% Similarity=0.379 Sum_probs=48.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec--cCcceEeecCce----EEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR--SDKFIRTVDGGL----VIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~--~~~~~~~~~~GL----lI~~v~~~DsG~Y~C~ 352 (378)
...+.+.+|+++.|.|...+.+. +.++|+.++.+ +... ...++...++++ .|.+++..|+|.|.|.
T Consensus 16 p~~~~v~~G~~v~L~C~~~g~p~---~~v~W~~~g~~-----~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 87 (217)
T 2vr9_A 16 PTDLVVKKNEPATLNCKVEGKPE---PTIEWFKDGEP-----VSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87 (217)
T ss_dssp CCCEEECTTSCEEECCEEECSSC---CEEEEEETTEE-----CCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEE
T ss_pred CCceEEeCCCcEEEEEEcCCCCC---CeEEEEECCcC-----ccCCCccceeEEecCCceEEEEEeccCCcccCceEEEE
Confidence 45578889999999999875433 57999987654 3211 122333333444 5788999999999999
Q ss_pred eCC
Q psy10772 353 LGN 355 (378)
Q Consensus 353 ~~~ 355 (378)
+.+
T Consensus 88 ~~n 90 (217)
T 2vr9_A 88 AKN 90 (217)
T ss_dssp EEE
T ss_pred Eec
Confidence 986
No 318
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=97.65 E-value=0.00017 Score=64.89 Aligned_cols=75 Identities=20% Similarity=0.191 Sum_probs=49.7
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecCc------eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDGG------LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~G------LlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......|.|+.+...++...+- . ...+|+....++ |.|.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGY-NFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQ 87 (226)
T ss_dssp CEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCC
T ss_pred CEEEecCCCEEEEEEecCc-cccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 4778899999999998532 2223479999875432221120 0 112355443333 9999999
Q ss_pred CCCCeEEEEEeCCe
Q psy10772 343 ELDAGKYDCWLGNT 356 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~ 356 (378)
.+|+|.|.|...+.
T Consensus 88 ~~DsG~Y~C~~~~~ 101 (226)
T 3mlr_H 88 ASDTGKYFCTRLYL 101 (226)
T ss_dssp GGGCEEEEEEEEEE
T ss_pred cccCEEEEEeEccC
Confidence 99999999998653
No 319
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.65 E-value=9.9e-05 Score=67.46 Aligned_cols=74 Identities=20% Similarity=0.257 Sum_probs=49.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--------ccCcceEee---cC---ceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--------RSDKFIRTV---DG---GLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--------~~~~~~~~~---~~---GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+........+.. ..++|+... .. -|.|.+|+.+
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 86 (256)
T 3tf7_C 10 DARVTVSEGASLQLRCKYSYSA---TPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRS 86 (256)
T ss_dssp CSEEEEETTSCEEECCEEECSS---CCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGG
T ss_pred CceEEecCCCeEEEEEEeCCCC---CceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcc
Confidence 4568899999999999986553 36899988643221111110 113343331 12 2999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|.+.+
T Consensus 87 DsG~Y~C~~~~ 97 (256)
T 3tf7_C 87 DSAVYFCAVSA 97 (256)
T ss_dssp GCSEEEEEEEC
T ss_pred cCEEEEEEEec
Confidence 99999999976
No 320
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.65 E-value=0.00015 Score=64.23 Aligned_cols=86 Identities=20% Similarity=0.152 Sum_probs=54.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-------------ccCcceEeec------CceEEee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-------------RSDKFIRTVD------GGLVIMA 340 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-------------~~~~~~~~~~------~GLlI~~ 340 (378)
.+.+.+|+++.|.|.....+ ...+.|.|+.+........+. . ...+|+.... ..|.|.+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFT-FTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred ceeEcCCCEEEEEEEecCcc-CCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 46788999999999987532 112479998875322111110 0 0123544432 1599999
Q ss_pred ecCCCCeEEEEEeCCee------e--EEEeeeecc
Q psy10772 341 VEELDAGKYDCWLGNTV------L--CTHNLTVDA 367 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~~~------l--~~~~~~v~~ 367 (378)
|+.+|+|.|.|.+.+.. . ....|+|..
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEecc
Confidence 99999999999998743 1 234666665
No 321
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.65 E-value=1.4e-05 Score=74.45 Aligned_cols=75 Identities=15% Similarity=0.174 Sum_probs=53.6
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEeecCceE-EeeecCCCCeEEEEEeCC---e
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLV-IMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLl-I~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+..|+++.|.|...+.+. | .++|++++.+ +. +. ....++.|+ |.+++.+|+|.|.|.+.| .
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~---p~~v~W~k~~~~-----~~---~~-~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~ 289 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPP---PFKSVWSRLDGQ-----WP---DG-LLASDNTLHFVHPLTFNYSGVYICKVTNSLGQ 289 (308)
T ss_dssp CEETTCCSCEEECCEEEESC---EEEEECCBSSSC-----CC---SS-CBCSTTEEECCSCCCSCCCSEEEEEEEETTEE
T ss_pred eeeeccccEEEEEEEecCCC---CcEEEEEECCeE-----CC---Cc-EEEcCCeEEEECCCChhhCEEEEEEEEeCCCc
Confidence 34567899999999876543 3 5899987754 32 22 223344554 678999999999999987 5
Q ss_pred eeEEEeeeeccc
Q psy10772 357 VLCTHNLTVDAH 368 (378)
Q Consensus 357 ~l~~~~~~v~~~ 368 (378)
.-++..|.|.+.
T Consensus 290 ~~~~~~l~V~~~ 301 (308)
T 4fom_A 290 RSDQKVIYISDP 301 (308)
T ss_dssp EEEEEECCEECC
T ss_pred EEEEEEEEEEcC
Confidence 677778888653
No 322
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.65 E-value=0.00011 Score=65.63 Aligned_cols=74 Identities=14% Similarity=0.219 Sum_probs=50.3
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-----eccCcceEeecC-------ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-----FRSDKFIRTVDG-------GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-----~~~~~~~~~~~~-------GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|.|...... +.|.|+.+....+...|. ....+|+....+ -|.|.+++.+|+
T Consensus 8 p~~v~v~~G~~v~L~C~~~~~~----~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 8 PSALSLHEGTDSALRCNFTTTM----RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp CSEEEEETTCCEEEEEEESSCC----SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred CCeEEEccCCcEEEEEEEeCCC----eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 3567899999999999986432 269999875322211120 012345444322 499999999999
Q ss_pred eEEEEEeCCe
Q psy10772 347 GKYDCWLGNT 356 (378)
Q Consensus 347 G~Y~C~~~~~ 356 (378)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (207)
T 1ypz_E 84 GTYFCAADTW 93 (207)
T ss_dssp EEEEEEEECB
T ss_pred EEEEEEEecC
Confidence 9999999764
No 323
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=97.65 E-value=6e-05 Score=65.18 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=51.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
....+.+|+++.|.|...+.+. | .++|+.++.. +. ..... ....-|.|.+++ |+|.|.|.+.|
T Consensus 114 ~~~~~~~g~~~~l~C~~~g~p~---p~~v~W~~~~~~-----~~--~~~~~-~~~~~L~i~~~~--d~G~Y~C~a~N~~g 180 (195)
T 2c5d_C 114 EDRTVAANTPFNLSCQAQGPPE---PVDLLWLQDAVP-----LA--TAPGH-GPQRSLHVPGLN--KTSSFSCEAHNAKG 180 (195)
T ss_dssp CCEEECTTCCEEEEEEEECSSC---CCEEEEEESSCB-----SS--SSTTS-SCCEEEEECCCS--SCEEEEEEEEETTE
T ss_pred CcEEEcCCCEEEEEeECCCCCC---CCEEEEEECCEe-----cc--CCCCc-CCCCeEEEcccc--cCceEEEEEEcCCC
Confidence 3467888999999999875543 5 7999998764 32 22221 233448888877 89999999987
Q ss_pred eee-EEEeeee
Q psy10772 356 TVL-CTHNLTV 365 (378)
Q Consensus 356 ~~l-~~~~~~v 365 (378)
... ++..|+|
T Consensus 181 ~~~s~~~~l~V 191 (195)
T 2c5d_C 181 VTTSRTATITV 191 (195)
T ss_dssp EEECCCEEEEE
T ss_pred ceEEEEEEEEE
Confidence 333 5666666
No 324
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=97.65 E-value=7.8e-05 Score=59.63 Aligned_cols=72 Identities=15% Similarity=0.271 Sum_probs=47.0
Q ss_pred eeEEEEeCCeeeeeee-eccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee--c-C---ceEEeeecCCC
Q psy10772 280 LKQTVTWGQSVHLSCF-VKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV--D-G---GLVIMAVEELD 345 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~-~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~--~-~---GLlI~~v~~~D 345 (378)
+.+.+.+|+++.|.|. ....+. .+.+.|+.+.. +...|-.. ..+|+... . . -|.|.+++.+|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~~--~~~v~W~r~~~--~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 83 (109)
T 1pew_A 8 HSVSESPGKTVTISCTRSSGNIA--SNYVQWYQQRS--APITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTED 83 (109)
T ss_dssp SEEEECTTSCEEEEEEESSSCGG--GSCCEEEEC-C--CCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCEEEcCCCCEEEEEEeCCCCCC--CccEEEEEECC--CCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhh
Confidence 4678899999999999 643321 24799998762 11112100 12344433 1 1 39999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|.+.+
T Consensus 84 sG~Y~C~~~~ 93 (109)
T 1pew_A 84 EADYYCQSYD 93 (109)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999865
No 325
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.64 E-value=6.7e-05 Score=75.49 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=56.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCC-eEEEEecccCceeeEeeccCcceEeec--------CceEEeeecCCCCeEEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQP-MSWYHYSKDKGRYQIKFRSDKFIRTVD--------GGLVIMAVEELDAGKYD 350 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~-v~W~~~~~~~~~~~l~~~~~~~~~~~~--------~GLlI~~v~~~DsG~Y~ 350 (378)
..+.+.+|+++.|.|...+.+. |. ++|+.++.+ +.. ..+++.... .-|.|.+++.+|+|.|.
T Consensus 321 ~~~~v~~G~~v~l~C~~~g~P~---p~~v~W~k~g~~-----~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 391 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYEAFPK---PEHQQWIYMNRT-----FTD-KWEDYPKSENESNIRYVSELHLTRLKGTEGGTYT 391 (524)
T ss_dssp SEEEECTTCCEEEEEEEEEESC---CCEEEEESSSCB-----CSS-SBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEE
T ss_pred ceEEEcCCCcEEEEEEEeecCC---CcEEEEEECCee-----ccC-CccceeEEccCCCceeEEEEEEeecCcccCeEEE
Confidence 4678889999999999876544 57 999998765 321 111223222 24999999999999999
Q ss_pred EEeCC---eeeEEEeeeecc
Q psy10772 351 CWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 351 C~~~~---~~l~~~~~~v~~ 367 (378)
|.+.| ..-++..|.|..
T Consensus 392 C~a~N~~g~~~~~~~l~V~~ 411 (524)
T 2ec8_A 392 FLVSNSDVNAAIAFNVYVNT 411 (524)
T ss_dssp EEEECSSCEEEEEEEEEECE
T ss_pred EEEEecCceEEEEEEEEEec
Confidence 99988 455666676654
No 326
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.64 E-value=4.3e-05 Score=66.33 Aligned_cols=56 Identities=23% Similarity=0.198 Sum_probs=44.3
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|...++ .+.++|+.++.. .......|.|.+++.+|+|.|.|.+.|
T Consensus 18 ~v~~G~~v~L~C~~~~~----~~~~~W~k~g~~-------------~~~~~~~L~i~~v~~~D~G~Y~C~a~n 73 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPPG----VDLYRLEKLSSS-------------RYQDQAVLFIPAMKRSLAGRYRCSYQN 73 (184)
T ss_dssp EEETTCCEEEEEECSTT----CSEEEEEETTTC-------------CEESSSEEEESSCCGGGCEEEEEEEEE
T ss_pred cccCCCcEEEEEeCCCC----CCEEEEEECCcc-------------ccCcccEEEECcCChhhCceEEEEEEc
Confidence 67899999999998653 247999887643 112345699999999999999999976
No 327
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=97.64 E-value=0.00015 Score=58.69 Aligned_cols=74 Identities=20% Similarity=0.208 Sum_probs=48.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....|.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~-~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (117)
T 2yc1_A 9 GGLVQPGGSLRLSCTGSGFT-FDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSLR 87 (117)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCeEEEEEEecCcc-cCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCCC
Confidence 46788999999999986321 1224799998754332211210 0 123554432 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (117)
T 2yc1_A 88 AEDTAVYYCARGG 100 (117)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999864
No 328
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=97.64 E-value=8e-05 Score=65.70 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=52.9
Q ss_pred eeEEEEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 280 LKQTVTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
..+.+.+|+++.|.|.. ..++ +.+.|.|+.+........+.. ...+|+..... .|.|.+++.+|+|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 8 PSVSAAPGQKVTISCSGSSSNI--GNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp SEEEECTTCCEEEEEECCTTTG--GGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CcEEecCCCeEEEEEEeecCCC--CCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 45788999999999994 3332 124799998653211100100 01234433222 3999999999999
Q ss_pred EEEEEeCCeee-----EEEeeeec
Q psy10772 348 KYDCWLGNTVL-----CTHNLTVD 366 (378)
Q Consensus 348 ~Y~C~~~~~~l-----~~~~~~v~ 366 (378)
.|.|.+.+..- ..-.|+|.
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEEC
T ss_pred EEEEEEEeCCCcceECCCEEEEEc
Confidence 99999987431 23456664
No 329
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.64 E-value=6.1e-05 Score=68.92 Aligned_cols=84 Identities=19% Similarity=0.139 Sum_probs=55.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
...+.+|+++.|.|..... -+.+.++|+.++..... ...............-|.|.+++..|+|.|.|.+.| ..
T Consensus 195 ~~~~~~g~~~~l~C~~~~~--~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 271 (289)
T 3ejj_X 195 KLVRIRGEAAQIVCSATNA--EVGFNVILKRGDTKLEI-PLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR 271 (289)
T ss_dssp SEECCSSSCEEEEEEEEES--SSCCEEEEEETTEECCC-CEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred ceEEEeCCcEEEEEEeCCC--CCceEEEEEECCEEeec-cCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCc
Confidence 4455789999999999752 12358999998754110 000000112223345699999999999999999988 66
Q ss_pred eEEEeeeecc
Q psy10772 358 LCTHNLTVDA 367 (378)
Q Consensus 358 l~~~~~~v~~ 367 (378)
-++-.|.|+.
T Consensus 272 ~~s~~L~~~~ 281 (289)
T 3ejj_X 272 TATMNFQVVE 281 (289)
T ss_dssp EEEEEEECC-
T ss_pred cccEEEEEEe
Confidence 6776776654
No 330
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.64 E-value=0.00021 Score=63.52 Aligned_cols=87 Identities=18% Similarity=0.134 Sum_probs=55.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----------ccCcceEeec---C---ceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~---~---GLlI~~v~ 342 (378)
..+.+.+|+++.|.|.....+ ...+.|.|+.+....+...|.. ...+|+.... . -|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFP-LTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSC-TTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCeeecCCCcEEEEEEECCCc-CCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 346788999999999986432 1235799988743222111110 0123544331 1 49999999
Q ss_pred CCCCeEEEEEeCCee-----e-EEEeeeecc
Q psy10772 343 ELDAGKYDCWLGNTV-----L-CTHNLTVDA 367 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~~-----l-~~~~~~v~~ 367 (378)
.+|+|.|.|.+.+.. . ....|+|..
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecC
Confidence 999999999998742 1 235677764
No 331
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=97.63 E-value=3.7e-05 Score=71.44 Aligned_cols=74 Identities=16% Similarity=0.323 Sum_probs=48.1
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc--eEEeeecCCCCeEEEEEeCC---e
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG--LVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G--LlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
+.+.+|+++.|.|...+.+. |.++|+.++.+ |. .+.++. ... |.|.+ .+|+|.|.|.+.| .
T Consensus 215 ~~v~~G~~v~l~C~~~g~p~---p~v~W~~~~~~-----l~--~~~~~~--~~~~~L~i~~--~~d~G~Y~C~a~N~~G~ 280 (304)
T 2yd9_A 215 HEIMPGGNVNITCVAVGSPM---PYVKWMQGAED-----LT--PEDDMP--VGRNVLELTD--VKDSANYTCVAMSSLGV 280 (304)
T ss_dssp BCCCTTCCEEEEEEEEEESC---CEEEEEETTEE-----CS--CSSSCC--BSEEEEEECS--CCSCEEEEEEEEETTEE
T ss_pred eEEcCCCeEEEEEEEeeeCC---CEEEEEECCEE-----CC--Cccccc--CCcEEEEEcc--cccCEEEEEEEEeCCCc
Confidence 45678999999999875544 58999998754 42 222221 223 44444 4799999999987 5
Q ss_pred eeEEEeeeecccc
Q psy10772 357 VLCTHNLTVDAHS 369 (378)
Q Consensus 357 ~l~~~~~~v~~~~ 369 (378)
.-++..|.|.+..
T Consensus 281 ~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 281 IEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEEEC-----
T ss_pred EEEEEEEEEecCc
Confidence 6677777776543
No 332
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=97.63 E-value=0.00012 Score=59.53 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=48.9
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|+|..... .+....|.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~-~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (120)
T 1n4x_H 9 PELKKPGETVKISCKATNY-AFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLK 87 (120)
T ss_dssp CEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCeEEEEEEecCc-ccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 4678899999999998532 1122479999876433322121 00 123554432 1 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~DsG~Y~C~~~~ 100 (120)
T 1n4x_H 88 NEDTATYFCVRDR 100 (120)
T ss_dssp GGGCEEEEEEEES
T ss_pred HHHCEEEEEEEEc
Confidence 9999999999875
No 333
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.63 E-value=2.1e-05 Score=68.84 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=44.9
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|...+++ +.+.|+.++...... . ...........|.|.+++.+|+|.|.|.+.|
T Consensus 15 ~v~~G~~v~L~C~~~~~~----~~~~W~k~g~~~~~~-~---~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEA----QEYRLVKEGSPEPWD-T---QNPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp EEETTCCEEEEEECCTTC----CEEEEEETTCSSCSE-E---ECCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cccCCCeEEEEEeCCCCC----cEEEEEECCCCCCcc-c---ccccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 678999999999986442 279999887642100 0 0001112234599999999999999999965
No 334
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.63 E-value=0.00018 Score=64.26 Aligned_cols=86 Identities=23% Similarity=0.117 Sum_probs=54.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~~------GLlI~~v~ 342 (378)
.+.+.+|+++.|.|.....+ +..+.|.|+.+...++...|.. ...+|+....+ -|.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFD-FSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CeEecCCCcEEEEEEecCcc-CCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 46788999999999986432 1124799988753222111210 01245544322 49999999
Q ss_pred CCCCeEEEEEeCCee------eEEEeeeecc
Q psy10772 343 ELDAGKYDCWLGNTV------LCTHNLTVDA 367 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~~------l~~~~~~v~~ 367 (378)
.+|+|.|.|.+.+.. -....|+|..
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 999999999987631 1234677764
No 335
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.63 E-value=3.7e-05 Score=67.00 Aligned_cols=83 Identities=22% Similarity=0.275 Sum_probs=54.1
Q ss_pred eEEEEeCCeeeeeeeeccCC-CCCCCCeEEEEecccCceeeEee----------ccCcceEe---ecCceEEeeecCCCC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPA-SMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRT---VDGGLVIMAVEELDA 346 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~-~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~---~~~GLlI~~v~~~Ds 346 (378)
.+.+..|+++.|.|....+. ..+.+.+.|..++.. +.. +-..|... ...-|.|.+|+.+|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~-----i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~ 77 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKM-----VLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDE 77 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEE-----EEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGC
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcE-----EEEEeCCceeecCcccceeEEccCCCcEEEEecccchhC
Confidence 46788999999999974321 123347889876543 210 01123222 123499999999999
Q ss_pred eEEEEEeCCee--------eEEEeeeeccc
Q psy10772 347 GKYDCWLGNTV--------LCTHNLTVDAH 368 (378)
Q Consensus 347 G~Y~C~~~~~~--------l~~~~~~v~~~ 368 (378)
|.|.|.+.+.. -+...|.|...
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 78 GTYECVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEEEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred eEEEEEEEcCCCCccccccccEEEEEEcCC
Confidence 99999998721 35677777653
No 336
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=97.62 E-value=0.00018 Score=65.76 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=48.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c------c----CcceEeec--C---ceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R------S----DKFIRTVD--G---GLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~------~----~~~~~~~~--~---GLlI~~v~ 342 (378)
...+.+.+|+++.|.|.... +.+.|.|+.+........+.. . . ++|+.... . -|.|.+|+
T Consensus 33 p~~v~v~~G~~v~L~C~~~~----~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (268)
T 3pl6_D 33 PSNKVTEKGKYVELRCDPIS----GHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTE 108 (268)
T ss_dssp CSEEEEETTCCEEEEEBCBT----TCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCC
T ss_pred CCEEEecCCCCEEEEEEeCC----CCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCC
Confidence 45678999999999999752 235799988542211111100 0 0 14444332 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 109 ~~D~G~Y~C~~~~ 121 (268)
T 3pl6_D 109 RGDSAVYLCATSA 121 (268)
T ss_dssp GGGCEEEEEEEES
T ss_pred cccCEEEEEEEec
Confidence 9999999999985
No 337
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=97.62 E-value=0.00012 Score=61.71 Aligned_cols=76 Identities=20% Similarity=0.126 Sum_probs=49.2
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCeEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAGKY 349 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG~Y 349 (378)
.+++.+|+++.|.|.......-..+.|.|+.+...+....|-. ...+|+..... -|.|.+|+.+|+|.|
T Consensus 14 ~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~~~DsG~Y 93 (135)
T 1p4b_L 14 ALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 93 (135)
T ss_dssp EEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred cEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCChhHCEEE
Confidence 3889999999999998643210124689998754322111210 01234443322 399999999999999
Q ss_pred EEEeCCe
Q psy10772 350 DCWLGNT 356 (378)
Q Consensus 350 ~C~~~~~ 356 (378)
.|...+.
T Consensus 94 ~C~~~~~ 100 (135)
T 1p4b_L 94 FCALWYS 100 (135)
T ss_dssp EEEEECS
T ss_pred EEEEecC
Confidence 9998763
No 338
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.62 E-value=0.00017 Score=63.65 Aligned_cols=87 Identities=21% Similarity=0.186 Sum_probs=54.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.|.|+.+...+....+. . ...+|+.... .-|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 8 GPELKKPGETVKISCKASGYMF-TNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCeEecCCCcEEEEEEEeCccc-ccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 3467889999999999874321 12579999874221111010 0 0123444332 24999999
Q ss_pred cCCCCeEEEEEeCCee-----e--EEEeeeecc
Q psy10772 342 EELDAGKYDCWLGNTV-----L--CTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~-----l--~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+.. . ....|+|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 9999999999998742 1 244667765
No 339
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.62 E-value=0.00012 Score=67.59 Aligned_cols=90 Identities=14% Similarity=0.142 Sum_probs=56.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC---CCCCeEEEEecccCceeeEee-------ccCcceEeec----CceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM---ANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD----GGLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L---a~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~----~GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|.....+.. ..+.|.|+.+........|.. ..+.|+.... ..|.|.+|+.+
T Consensus 12 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 91 (264)
T 2gjj_A 12 PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAE 91 (264)
T ss_dssp CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHH
Confidence 456789999999999998654310 024799998742211111110 0123444332 14999999999
Q ss_pred CCeEEEEEeCCee----eEEEeeeeccc
Q psy10772 345 DAGKYDCWLGNTV----LCTHNLTVDAH 368 (378)
Q Consensus 345 DsG~Y~C~~~~~~----l~~~~~~v~~~ 368 (378)
|+|.|.|.+.+.. -....|+|...
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 92 DLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred HCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 9999999998742 12346777543
No 340
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.62 E-value=0.00012 Score=62.64 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=51.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCeeeEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCT 360 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~l~~ 360 (378)
...+.+|+++.|.|...+.+. +...++|+.++.+ |. .+.. ....++++.. +..|+|.|.|.+.+.....
T Consensus 7 ~~~v~~G~~v~l~C~~~~~~~-p~~~~~W~k~~~~-----l~--~~~~--~~~~~~l~i~-~~~d~G~Y~C~~~n~~~~~ 75 (184)
T 3b5h_A 7 TTVEDLGSKILLTCSLNDSAT-EVTGHRWLKGGVV-----LK--EDAL--PGQKTEFKVD-SDDQWGEYSCVFLPEPMGT 75 (184)
T ss_dssp EEEEEETTEEEEEEEEESCSS-CCCEEEEESSSEE-----EE--CTTC--CCSEEEEEEC-GGGCCEEEEEEEESTTSCE
T ss_pred EEEEecCCCEEEEEECCCCCC-CceEEEEEeCCEE-----ee--cccc--cCCcEEEEEe-chhhCeEEEEEEECCcCcE
Confidence 456788999999999764433 1227899987643 53 2221 1123344444 6899999999999866677
Q ss_pred Eeeeeccc
Q psy10772 361 HNLTVDAH 368 (378)
Q Consensus 361 ~~~~v~~~ 368 (378)
..|+|...
T Consensus 76 ~~l~V~~~ 83 (184)
T 3b5h_A 76 ANIQLHGP 83 (184)
T ss_dssp EEEEECCS
T ss_pred EEEEEecC
Confidence 77877643
No 341
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=97.62 E-value=0.00012 Score=60.73 Aligned_cols=93 Identities=16% Similarity=0.217 Sum_probs=57.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-------cCcceEeec------CceEEeeecCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-------SDKFIRTVD------GGLVIMAVEEL 344 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-------~~~~~~~~~------~GLlI~~v~~~ 344 (378)
.+.+.+.+|+++.|.|...... ....+.|+.+...++...|-. . ..+|+.... --|.|.+++.+
T Consensus 8 P~~~~v~~G~~vtL~C~~s~~~--~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~ 85 (129)
T 3rrq_A 8 PALLVVTEGDNATFTCSFSNTS--ESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRN 85 (129)
T ss_dssp CSEEEEETTSCEEEEEECCCCC---CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCGG
T ss_pred CCEEEEeCCCCEEEEeEecCCC--CCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCChh
Confidence 3567889999999999986432 123689988754322211211 0 123554431 13999999999
Q ss_pred CCeEEEEEeCCe---e----eEEEeeeecccccCCC
Q psy10772 345 DAGKYDCWLGNT---V----LCTHNLTVDAHSNVAD 373 (378)
Q Consensus 345 DsG~Y~C~~~~~---~----l~~~~~~v~~~~c~~~ 373 (378)
|+|.|.|...+. . -+.-.|+|-+..=.+|
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~~~p 121 (129)
T 3rrq_A 86 DSGTYLCGAISLAPKLQIKESLRAELRVTERRAEVP 121 (129)
T ss_dssp GCEEEEEEEEECGGGCEEEECCCEEEEEECCCC---
T ss_pred HCEEEEEEEEecCCCceeeEeceEEEEEecCccccC
Confidence 999999998751 1 2446777766543333
No 342
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.62 E-value=4e-05 Score=68.40 Aligned_cols=75 Identities=13% Similarity=0.244 Sum_probs=37.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+. +.|.|+.+........+.. ...+|+..... -|.|.+++.+|+|
T Consensus 30 p~~~~v~~G~~v~L~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 106 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITSTDID---DDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVA 106 (233)
T ss_dssp CSBC-------CCEEEEEEEEES---SCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCS
T ss_pred CCeEEEecCCCEEEEEecCCcCC---CeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCE
Confidence 34567889999999999865543 4799988753211110110 01223322212 4999999999999
Q ss_pred EEEEEeCCe
Q psy10772 348 KYDCWLGNT 356 (378)
Q Consensus 348 ~Y~C~~~~~ 356 (378)
.|.|.+.+.
T Consensus 107 ~Y~C~~~~~ 115 (233)
T 3bqu_C 107 DYYCLQSDN 115 (233)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEecC
Confidence 999999873
No 343
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.62 E-value=0.00015 Score=66.04 Aligned_cols=73 Identities=18% Similarity=0.299 Sum_probs=48.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-cCc---eEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DGG---LVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~G---LlI~~v~~~DsG~ 348 (378)
..+.+.+|+++.|.|.....+. +.|.|+.+........+.. ...+|+... ..+ |.|.+|+.+|+|.
T Consensus 146 ~~~~v~~G~~v~L~C~~~~~~~---~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 222 (256)
T 3umt_A 146 SSLSASLGERVSITCRASQDIG---SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVD 222 (256)
T ss_dssp SEEEECTTCCEEEEEEESSCCT---TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSE
T ss_pred CeEEEECCCCEEEEEEEecCCC---cEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEE
Confidence 4577889999999999865432 4899988643221110100 012333322 222 9999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|.+.+
T Consensus 223 Y~C~~~~ 229 (256)
T 3umt_A 223 YYCLQYA 229 (256)
T ss_dssp EEEEECS
T ss_pred EEEEEee
Confidence 9999987
No 344
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=97.61 E-value=0.00019 Score=60.57 Aligned_cols=72 Identities=18% Similarity=0.251 Sum_probs=49.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEe-cccCceeeEeeccCcceEeecC----ceEEeeecCCCCeEEEEEe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHY-SKDKGRYQIKFRSDKFIRTVDG----GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~-~~~~~~~~l~~~~~~~~~~~~~----GLlI~~v~~~DsG~Y~C~~ 353 (378)
...+.+.+|+++.|.|...+. ...+.|+.+ ...++...| +...+|+..... -|.|.+++.+|+|.|.|.+
T Consensus 25 p~~~~v~~G~svtL~C~~s~~----~~~v~Wyrq~~~g~~~~~l-~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~ 99 (134)
T 3kg5_A 25 PRFIARKRGFTVKMHCYMNSA----SGNVSWLWKQEMDENPQQL-KLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQ 99 (134)
T ss_dssp CSEEEEETTCCEEEEEECCCT----TCCCEEEEESSSSSCCEEC-CCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEE
T ss_pred CCEEEEeCCCCEEEEEEECCC----CceEEEEEECCCCCCcEEE-EEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEE
Confidence 356789999999999998543 147899988 332222112 112334443222 2999999999999999998
Q ss_pred CC
Q psy10772 354 GN 355 (378)
Q Consensus 354 ~~ 355 (378)
.+
T Consensus 100 ~~ 101 (134)
T 3kg5_A 100 KC 101 (134)
T ss_dssp EC
T ss_pred Ec
Confidence 65
No 345
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=97.61 E-value=0.00022 Score=58.65 Aligned_cols=73 Identities=18% Similarity=0.260 Sum_probs=48.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec----------cCcceEee--cC---ceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR----------SDKFIRTV--DG---GLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~----------~~~~~~~~--~~---GLlI~~v~~ 343 (378)
...+.+.+|+++.|.|..... ...|.|+.+....+..-|-.. ..+|+... .. -|.|.+|+.
T Consensus 8 p~~v~v~~G~~vtL~C~~~~~----~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (121)
T 2oi9_C 8 PRNKVAVTGEKVTLSCNQTNN----HNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASRPSQENFSLTLESATP 83 (121)
T ss_dssp CSEEEEETTCCEEEEEEESSC----CSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEECCSSSEEEEEESSCCG
T ss_pred CCeEEecCCCcEEEEEEecCC----CCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEcCCCCEEEEEECCCCH
Confidence 356789999999999996422 247999987543222112110 12354433 22 399999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|...+
T Consensus 84 ~DsG~Y~C~~~~ 95 (121)
T 2oi9_C 84 SQTSVYFCASGG 95 (121)
T ss_dssp GGCEEEEEEEES
T ss_pred HHCEEEEEEEcc
Confidence 999999999875
No 346
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.61 E-value=8.4e-06 Score=76.67 Aligned_cols=80 Identities=21% Similarity=0.332 Sum_probs=0.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe--
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT-- 356 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~-- 356 (378)
.+.+.+.+|+++.|.|...... +.+.++|+.++.+ |. .+.++...+..|.|.+++.+|+|.|.|.+.+.
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~--p~~~v~W~k~g~~-----~~--~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 85 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGG--PMGPTVWVKDGTG-----LV--PSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQR 85 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCC--CCcceEEEECCee-----CC--CcccEEeccceEEEeecccccCEEEEEEEEeCCe
Confidence 4567888999999999986432 2257999998764 43 44555556677999999999999999999874
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
......|.|..
T Consensus 86 ~~~~~~l~V~~ 96 (334)
T 1ry7_B 86 VLCHFSVRVTD 96 (334)
T ss_dssp -----------
T ss_pred EEEEEEEEEec
Confidence 34455565554
No 347
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=97.60 E-value=0.00018 Score=64.35 Aligned_cols=87 Identities=18% Similarity=0.142 Sum_probs=55.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+ ...+.|.|+.+....+...+.. ...+|+.... --|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFT-FSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEcCCCcEEEEEEecCcc-cCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 356788999999999986432 1124799998753222111210 0124554432 14999999
Q ss_pred cCCCCeEEEEEeCCee-------e--EEEeeeecc
Q psy10772 342 EELDAGKYDCWLGNTV-------L--CTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~-------l--~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+.. . ....|+|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 121 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS 121 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEcc
Confidence 9999999999997642 1 233677764
No 348
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=97.60 E-value=0.00013 Score=59.16 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=48.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec----------cCcceEeec---C---ceEEeeecCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR----------SDKFIRTVD---G---GLVIMAVEEL 344 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~----------~~~~~~~~~---~---GLlI~~v~~~ 344 (378)
+.+.+|+++.|+|...... .....|.|+.+...++...|- .. ..+|+.... . -|.|.+++.+
T Consensus 10 ~~~~~G~~vtL~C~~~~~~-~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~ 88 (116)
T 1a2y_B 10 GLVAPSQSLSITCTVSGFS-LTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTD 88 (116)
T ss_dssp SEECTTSCEEEEEEEESSC-TTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEeCCCcEEEEEEEcCCC-cCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCHH
Confidence 5788899999999986332 122479999875432221121 11 123554432 2 3999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|...+
T Consensus 89 Dsg~Y~C~~~~ 99 (116)
T 1a2y_B 89 DTARYYCARER 99 (116)
T ss_dssp GCEEEEEEEES
T ss_pred HCEEEEEEEec
Confidence 99999999875
No 349
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=97.60 E-value=8e-05 Score=71.55 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=55.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecCceEEeeecCCCCeEEEEEeCC---
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
..+.+.+|+++.|.|...+.+. +.++|+.++.. +.. .+.++. ....-|.|.+++..|+|.|.|.+.|
T Consensus 229 ~~~~~~~g~~~~l~C~~~~~p~---~~~~W~~~~~~-----~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 299 (403)
T 3laf_A 229 SNVIAIEGKDAVLECCVSGYPP---PSFTWLRGEEV-----IQL-RSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNE 299 (403)
T ss_dssp CCEEEETTSCEEECCEEEEESC---CEEEEEETTEE-----CCC-SSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CceEecCCCcEEEEEEcCCCCC---CeEEEEECCee-----ccC-CCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCC
Confidence 3467889999999999875433 58999987653 321 222333 3344599999999999999999976
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
..-.+..|.|..
T Consensus 300 ~~~~~~~l~V~~ 311 (403)
T 3laf_A 300 NISASAELTVLV 311 (403)
T ss_dssp EEEEEEEEEEEE
T ss_pred ceEEEEEEEEEC
Confidence 445556666644
No 350
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=97.60 E-value=0.00017 Score=63.92 Aligned_cols=75 Identities=16% Similarity=0.149 Sum_probs=49.4
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
+.+.+|+++.|.|...+.+. |.+.|..+... .+ .+..... ...|.|.+|+.+|+|.|.|.+.| .
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~---p~i~W~~~~~~----~~----~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 79 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCES---PFFSWRTQIDS----PL----NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRK 79 (202)
T ss_dssp EEEETTSCEEEEEEEESCSS---CEEEEEETTCC----CC----SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEE
T ss_pred EEEcCCCcEEEEEeecCCCC---CeEEEECCCCC----Cc----cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCce
Confidence 34458999999999875443 57999763211 01 1111111 12399999999999999999987 3
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-....|+|..
T Consensus 80 ~~~~~~l~V~~ 90 (202)
T 1vca_A 80 LEKGIQVEIYS 90 (202)
T ss_dssp EEEEEEEEEEB
T ss_pred EeeEEEEEEEe
Confidence 34456677754
No 351
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.59 E-value=4e-05 Score=66.79 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=43.8
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCc-ceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK-FIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~-~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|....+ .+.+.|+.++.. +...... .......-|.|.+++.+|+|.|.|.+.+
T Consensus 14 ~v~~G~~v~L~C~~~~~----~~~~~w~k~g~~-----~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG----AVEYQLHFEGSL-----FAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp EEETTCCEEEEEECCTT----CCEEEEEETTEE-----EEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCCCCEEEEEecCCC----CCEEEEEECCCc-----ccccccccCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 67889999999997532 236899877653 2210111 1112234599999999999999999865
No 352
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=97.59 E-value=0.00017 Score=64.60 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=50.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+ ...+.|.|+.+...++...|.. ...+|+.... .-|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFR-ISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEecCCCCEEEEEEecCcc-cCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 346789999999999986432 1125799988753222111100 0124544432 24999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~D~G~Y~C~~~~~ 101 (225)
T 1op3_H 87 RVEDTAIYYCARKGS 101 (225)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999874
No 353
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.59 E-value=0.00023 Score=64.86 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=48.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec------CceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD------GGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~------~GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|..... .+.+.+.|+.+........+.. ..++|+.... .-|.|.+++.+|
T Consensus 143 p~~~~v~~G~~v~L~C~~~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 220 (259)
T 3omz_A 143 QSSVSMPVRKAVTLNCLYETS--WWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLED 220 (259)
T ss_dssp CCCEEEETTCCEEECCEEECC--CSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGG
T ss_pred CCEEEEcCCCCEEEEEECCCc--cCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhH
Confidence 455788999999999987642 1235899988753222111100 0123444331 129999999999
Q ss_pred CeEEEEEeC
Q psy10772 346 AGKYDCWLG 354 (378)
Q Consensus 346 sG~Y~C~~~ 354 (378)
+|.|.|.+.
T Consensus 221 sG~Y~C~~~ 229 (259)
T 3omz_A 221 SAKYFCALG 229 (259)
T ss_dssp CSEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999995
No 354
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=97.59 E-value=0.00023 Score=58.41 Aligned_cols=74 Identities=22% Similarity=0.256 Sum_probs=48.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeec---C---ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVD---G---GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~---~---GLlI~~v 341 (378)
..+.+.+|+++.|+|.....+ .....|.|+.+...++...|- . ...+|+.... . -|.|.++
T Consensus 10 ~~~~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (121)
T 2xt1_B 10 GGGLVQAGGSLRLSCAASGSF-FMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDL 88 (121)
T ss_dssp CCEEEETTCCEEEEEEEESSS-CCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEeCCCCEEEEEEecCee-ccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCC
Confidence 357889999999999986321 223479999875332222121 0 0123544432 1 3999999
Q ss_pred cCCCCeEEEEEeC
Q psy10772 342 EELDAGKYDCWLG 354 (378)
Q Consensus 342 ~~~DsG~Y~C~~~ 354 (378)
+.+|+|.|.|...
T Consensus 89 ~~~DsG~Y~C~~~ 101 (121)
T 2xt1_B 89 KPEDTAMYYCKAS 101 (121)
T ss_dssp CGGGCEEEEEEET
T ss_pred CHHHCEEEEEEEE
Confidence 9999999999986
No 355
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=97.59 E-value=0.00011 Score=69.42 Aligned_cols=80 Identities=11% Similarity=0.046 Sum_probs=54.0
Q ss_pred ceeEEEEeCCeeeeeeeeccC--CCCCCCCeEEEEecccCceeeEeeccCcceEeecC-----ceEEeeecCCCCeEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLP--ASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG-----GLVIMAVEELDAGKYDC 351 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~--~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~-----GLlI~~v~~~DsG~Y~C 351 (378)
.....+..|+++.|.|..... +..+.+.|.|++++.. |. ++++....+ -|.|.+++..|+|.|.|
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~-----l~---~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c 78 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAEL-----QP---GGRQQRLSDGTQESIITLPHLNHTQAFLSCS 78 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCB-----CT---TCEECCCSSSCCCEEEEESCCCSSEEEEEEE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEE-----CC---ccceEEEecCeEEEEEEEeccCCCccceEEe
Confidence 345678899999999998764 1123468999988754 31 222222122 39999999999999999
Q ss_pred EeCC---eeeEEEeeeec
Q psy10772 352 WLGN---TVLCTHNLTVD 366 (378)
Q Consensus 352 ~~~~---~~l~~~~~~v~ 366 (378)
.+.+ +..+.-.|.|.
T Consensus 79 ~~~~~~~~~~~~~~l~v~ 96 (313)
T 2d9q_B 79 LNWGNSLQILDQVELRAG 96 (313)
T ss_dssp EESSSSEEEEEEEEEEEC
T ss_pred eecCCCceeEEEEEEccC
Confidence 9965 33444455554
No 356
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.59 E-value=6.5e-05 Score=64.39 Aligned_cols=72 Identities=24% Similarity=0.304 Sum_probs=50.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe-ee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT-VL 358 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~-~l 358 (378)
..+.+.+|+++.|.|...+.+. ...+.|+.++.. +. . ...-|.|.+++.+|+|.|.|.+.+. .-
T Consensus 15 ~~~~v~~G~~v~L~C~~~~~p~--~~~~~W~~~~~~-----~~--~------~~~~L~i~~~~~~d~G~Y~C~~~n~~~s 79 (175)
T 1fnl_A 15 QWYSVLEKDSVTLKCQGAYSPE--DNSTQWFHNESL-----IS--S------QASSYFIDAATVNDSGEYRCQTNLSTLS 79 (175)
T ss_dssp CCSEEETTCCEEEEEECCCBTT--BCCCEEEETTEE-----EE--S------SCSEEEESSCCGGGCEEEEEECSSSCCC
T ss_pred CceeeeCCCcEEEEeeCCCCCC--CcceEEEECCEE-----cc--C------CceEEEEeCCCcccCEEEEEEeeCCccc
Confidence 3457889999999999865433 113789987653 42 1 2346899999999999999999872 22
Q ss_pred EEEeeeec
Q psy10772 359 CTHNLTVD 366 (378)
Q Consensus 359 ~~~~~~v~ 366 (378)
....|.|.
T Consensus 80 ~~~~l~V~ 87 (175)
T 1fnl_A 80 DPVQLEVH 87 (175)
T ss_dssp CCEEEEEE
T ss_pred ccEEEEEe
Confidence 33444444
No 357
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.59 E-value=0.00049 Score=69.90 Aligned_cols=128 Identities=19% Similarity=0.139 Sum_probs=73.8
Q ss_pred EEEEEEEEeeeecCCCeEEEEEEECCCeeE-EEEeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCCC
Q psy10772 225 HLVVDVVQYEVFGTTSEYIVYFAATTTLRT-VFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMA 303 (378)
Q Consensus 225 ~IaVd~v~~~~~~~~~~ytV~flGT~~G~v-~~V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La 303 (378)
.+.+..++..| .+.|.+. +....|.. ..+...+... |..- ...+.+.+.+|+++.|.|.....+ +
T Consensus 76 ~L~I~~v~~~D---~G~Y~C~-~~n~~~~~~~~~~l~V~~~-----p~~~---~~~~~~~v~~G~~v~l~C~~~~~~--~ 141 (585)
T 2ocw_A 76 VVNIAQLSQDD---SGRYKCG-LGINSRGLSFDVSLEVSQG-----PGLL---NDTKVYTVDLGRTVTINCPFKTEN--A 141 (585)
T ss_pred EEEECCCCccc---CEEEEEE-cccCCCCceEEEEEEEecC-----cccc---CCCccEEEEcCCCEEEEEEecCCC--C
Confidence 34555555554 5889987 34444432 2222112111 1111 134567889999999999986432 2
Q ss_pred CCCeEEEEecccCceeeEee-------ccCcceEeecC-------ceEEeeecCCCCeEEEEEeCC---eeeEEEeeeec
Q psy10772 304 NQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG-------GLVIMAVEELDAGKYDCWLGN---TVLCTHNLTVD 366 (378)
Q Consensus 304 ~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~-------GLlI~~v~~~DsG~Y~C~~~~---~~l~~~~~~v~ 366 (378)
.+.+.|+.++.+.-. .+.. ...+++....+ -|.|.+++.+|+|.|.|.+.| ..-....|+|.
T Consensus 142 ~~~v~W~k~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (585)
T 2ocw_A 142 QKRKSLYKQIGLYPV-LVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL 220 (585)
T ss_pred CccEEEEECCCCCce-EEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc
Confidence 246999988643100 0100 01233333322 399999999999999999987 33456667665
Q ss_pred c
Q psy10772 367 A 367 (378)
Q Consensus 367 ~ 367 (378)
.
T Consensus 221 ~ 221 (585)
T 2ocw_A 221 K 221 (585)
T ss_pred c
Confidence 4
No 358
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.58 E-value=0.0003 Score=66.97 Aligned_cols=86 Identities=16% Similarity=0.177 Sum_probs=55.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v~ 342 (378)
.+.+.+|+++.|.|.....+ .+.+.|.|+.+........+.. ...+|+.... .-|.|.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (344)
T 1za6_B 9 AEVVKPGASVKISCKASGYT-FTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLR 87 (344)
T ss_dssp CEEECTTCCEEEEEEEESSC-TTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEEeCCCcEEEEEEcCCcc-ccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCC
Confidence 46788999999999986542 2335799998742211110100 1134554432 149999999
Q ss_pred CCCCeEEEEEeCCee---eEEEeeeecc
Q psy10772 343 ELDAGKYDCWLGNTV---LCTHNLTVDA 367 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~~---l~~~~~~v~~ 367 (378)
.+|+|.|.|.+.+.. -....|+|..
T Consensus 88 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~ 115 (344)
T 1za6_B 88 SEDTAVYFCTRSLNMAYWGQGTLVTVSS 115 (344)
T ss_dssp GGGCEEEEEEETTTTCEECCCEEEEECS
T ss_pred cccCEEEEEEEecCcceecCcEEEEEec
Confidence 999999999999831 1334566654
No 359
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=97.58 E-value=8.4e-05 Score=65.48 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=49.8
Q ss_pred EEEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCC--
Q psy10772 283 TVTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGN-- 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~-- 355 (378)
.+.+|+++.|.|.. .+.+. |.++|+.+... .+............+| |.|.+++.+|+|.|.|.+.|
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~---~~v~W~~~~~~----~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 193 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPE---AEVFWKDGQGV----PLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPV 193 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSC---CEEEEECTTSC----BCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETT
T ss_pred eecCCceEEEEEecccccCC---CeEEEEcCCCc----cCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCC
Confidence 56789999999998 43333 58999763221 0110001112223444 67999999999999999986
Q ss_pred -eeeEEEeeeeccc
Q psy10772 356 -TVLCTHNLTVDAH 368 (378)
Q Consensus 356 -~~l~~~~~~v~~~ 368 (378)
..-++..|.|.+.
T Consensus 194 g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 194 LQQDAHGSVTITGQ 207 (222)
T ss_dssp TTEEEEEEEECCC-
T ss_pred CCCceEEEEEEeCC
Confidence 5667777877654
No 360
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=97.58 E-value=0.00023 Score=57.53 Aligned_cols=76 Identities=14% Similarity=0.243 Sum_probs=49.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCC---CCCCCeEEEEecccCceeeEeec---------cCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPAS---MANQPMSWYHYSKDKGRYQIKFR---------SDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~---La~~~v~W~~~~~~~~~~~l~~~---------~~~~~~~~~~------GLlI~~v 341 (378)
+.+.+.+|+++.|+|....+.. .....|.|+.+...+.. .|... ..+|+....+ -|.|.+|
T Consensus 8 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~v~W~~~~~g~~~-~v~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (119)
T 1qfo_A 8 KNVQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQ-VVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKDL 86 (119)
T ss_dssp SEEEEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCE-EEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECSC
T ss_pred CEEEEecCCcEEEEEEeeCCCccCCCCCeEEEEEEcCCCCCC-EEEECCCCcccCccceeeEEEeCCCCCCEEEEEEccC
Confidence 5688999999999999764432 22246899987542211 12111 1235544322 3999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.....
T Consensus 87 ~~~Dsg~Y~C~v~~~ 101 (119)
T 1qfo_A 87 KPEDSGTYNFRFEIS 101 (119)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred CcccCceEEEEEEeC
Confidence 999999999998653
No 361
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=97.58 E-value=0.0002 Score=57.56 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=53.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecc------c-----CceeeEeeccCcceEee------cCceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSK------D-----KGRYQIKFRSDKFIRTV------DGGLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~------~-----~~~~~l~~~~~~~~~~~------~~GLlI~~v 341 (378)
...+.+.+|+++.|+|....... ....+.|+.+.. . .+. .+.....+|+... .--|.|.+|
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~-~~~~v~W~~~~~~~~~~~~~~i~~~~~-~~~~~~~~r~~~~~~~~~~~~sL~I~~v 81 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLG-GIVPMCWGLGECRHSYCIRSLIWTNGY-TVTHQRNSRYQLKGNISEGNVSLTIENT 81 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHH-CSCCEEEEESCHHHHTTTTEEEEECSS-SEEEESSTTEECCSCGGGTBCCEEESSC
T ss_pred ccEEEEEcCCCEEEEEEeecCCC-CCEEEEEECCCCCcCCCceEEEEeCCe-EcccccCccEEEecCccCCeEEEEEccC
Confidence 35678999999999998753211 123799988741 0 010 0111123344332 124999999
Q ss_pred cCCCCeEEEEEeCC---eeeEEEeeeecc
Q psy10772 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~---~~l~~~~~~v~~ 367 (378)
+.+|+|.|.|.... ..-+...|.|..
T Consensus 82 ~~~DsG~Y~C~v~~~~~~~~~~v~L~V~~ 110 (115)
T 2or7_A 82 VVGDGGPYCCVVEIPGAFHFVDYMLEVKP 110 (115)
T ss_dssp CGGGCEEEEEEECCTTSCEEEEEEEEEES
T ss_pred CHHHCEEEEEEEECCCceeEEEEEEEEcC
Confidence 99999999999885 224555665543
No 362
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.58 E-value=2.7e-05 Score=68.10 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=51.0
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-cCcceEeecCceEEeeecCCCCeEEEEEeCCee----
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-SDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV---- 357 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~---- 357 (378)
.+.+|+++.|.|...+.+. .++|+.++.. +... ...+......-|.|.+++.+|+|.|.|.+.|..
T Consensus 15 ~v~~G~~v~L~C~~~~~~~----~~~W~k~g~~-----~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~ 85 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ----EYRLYREKKT-----APWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRS 85 (198)
T ss_dssp EEETTCCEEEEEECCTTCC----CEEEEESSSC-----CHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEEC
T ss_pred cccCCCcEEEEEEecCCCc----EEEEEECCcc-----ccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcc
Confidence 6789999999999865433 6999988754 3110 111111234459999999999999999996532
Q ss_pred --eEEEeeeecc
Q psy10772 358 --LCTHNLTVDA 367 (378)
Q Consensus 358 --l~~~~~~v~~ 367 (378)
-....|.|..
T Consensus 86 ~~s~~~~l~V~~ 97 (198)
T 1ugn_A 86 ESSDPLELVVTG 97 (198)
T ss_dssp CCCCCEEEEEEC
T ss_pred cCCccEEEEEcc
Confidence 2335566654
No 363
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=97.58 E-value=7.3e-05 Score=64.98 Aligned_cols=81 Identities=19% Similarity=0.284 Sum_probs=51.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc----CcceEeecCceEE-----eeecCCCCeEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS----DKFIRTVDGGLVI-----MAVEELDAGKY 349 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~----~~~~~~~~~GLlI-----~~v~~~DsG~Y 349 (378)
...+.+.+|+++.|.|...+.+. +.++|+.++.. +.... ..+....+.++.+ .+++..|+|.|
T Consensus 16 p~~~~v~~G~~v~l~C~~~~~p~---~~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 16 PSDLIVSKGEPATLNCKAEGRPT---PTIEWYKGGER-----VETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp CCCEEECTTCCEEECCEEEEESC---CEEEEEETTEE-----CCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCceEEeCCCcEEEEEEcCCCCC---CEEEEEECCEE-----eeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 35578889999999999865433 58999988654 22100 1122233344444 45689999999
Q ss_pred EEEeCCee----eEEEeeeecc
Q psy10772 350 DCWLGNTV----LCTHNLTVDA 367 (378)
Q Consensus 350 ~C~~~~~~----l~~~~~~v~~ 367 (378)
.|.+.+.. -....|.|..
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~ 109 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAI 109 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECE
T ss_pred EEEEECCCCceeecceEEEEEe
Confidence 99998621 2345555543
No 364
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=97.58 E-value=0.00018 Score=65.82 Aligned_cols=76 Identities=20% Similarity=0.204 Sum_probs=50.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecCc------eEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDGG------LVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~G------LlI~~v 341 (378)
..+.+.+|+++.|.|..... ....+.|.|+.+....+...+- . ...+|+....++ |.|.++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGF-TFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp CCCEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCEEECCCCcEEEEEEeeCc-cccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 35678899999999998642 1223479998875332221120 0 112354444332 999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (253)
T 3liz_H 87 KSEDTAMYYCTRDPA 101 (253)
T ss_dssp CGGGCEEEEEEECCB
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999874
No 365
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=97.57 E-value=9.7e-05 Score=60.34 Aligned_cols=76 Identities=18% Similarity=0.325 Sum_probs=46.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCC-CCCCeEEEEecccCceeeE---------eecc----CcceEeecC-----------
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASM-ANQPMSWYHYSKDKGRYQI---------KFRS----DKFIRTVDG----------- 334 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~L-a~~~v~W~~~~~~~~~~~l---------~~~~----~~~~~~~~~----------- 334 (378)
..+.+.+|+++.|+|....+..- ....|.|+.+........+ .... .+|+....+
T Consensus 10 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~~ 89 (128)
T 3r0n_A 10 PEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAE 89 (128)
T ss_dssp SEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCCB
T ss_pred CeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccccccccC
Confidence 45778899999999998654320 1116899886311000000 0001 134333222
Q ss_pred ----ceEEeeecCCCCeEEEEEeCC
Q psy10772 335 ----GLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 335 ----GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.|.|.+|+.+|+|.|.|....
T Consensus 90 ~~~~sL~I~~v~~~D~G~Y~C~v~~ 114 (128)
T 3r0n_A 90 LQDATLALHGLTVEDEGNYTCEFAT 114 (128)
T ss_dssp CSBCCEEECSCCGGGCEEEEEEEEE
T ss_pred CCCeEEEEccCCchhCeEEEEEEEe
Confidence 599999999999999998643
No 366
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.57 E-value=7.5e-05 Score=68.16 Aligned_cols=70 Identities=13% Similarity=-0.022 Sum_probs=0.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.. ....|-++. ++.+|+|.|.|.+.| .
T Consensus 193 ~~~~v~~g~~~~l~C~~~g~P~---p~i~W~~~~~~---------------~~~~g~~~~-v~~~d~G~Y~C~a~N~~G~ 253 (265)
T 2oz4_A 193 GNWTWPENSQQTPMCQAWGNPL---PELKCLKDGTF---------------PLPIGESVT-VTRDLEGTYLCRARSTQGE 253 (265)
T ss_dssp SEEEEETTCEECCCCCCEEESC---CEEEEEETTTE---------------ECCTTSCEE-CCGGGCEEEEEEEEETTEE
T ss_pred CccEEcCCCeEEEEeECccCCC---CeEEEEECCcc---------------cCCCCcEEE-eehhhCeEEEEEEECCCCc
Q ss_pred eeEEEeeeeccc
Q psy10772 357 VLCTHNLTVDAH 368 (378)
Q Consensus 357 ~l~~~~~~v~~~ 368 (378)
.-++..|+|...
T Consensus 254 ~~~~~~l~V~~p 265 (265)
T 2oz4_A 254 VTREVTVNVLSP 265 (265)
T ss_dssp EEEEEEEEEECC
T ss_pred EEEEEEEEEecC
No 367
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.57 E-value=0.00016 Score=65.72 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=48.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeec-------cCcceEeecCc----eEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFR-------SDKFIRTVDGG----LVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~~G----LlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|.....+. + .+.|+.+........+... ..+|+.....+ |.|.+|+.+|+
T Consensus 148 p~~~~v~~G~~v~L~C~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 224 (257)
T 3gkz_A 148 PAIMSASPGEKVTLTCSASSSVS---SSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDA 224 (257)
T ss_dssp CSEEEECTTCCEEEEEEESSCCC---GGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CceEEEeCCCcEEEEEEEccCcc---ceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHC
Confidence 34578889999999999865322 3 7999886432211111100 11343332222 99999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 225 G~Y~C~~~~ 233 (257)
T 3gkz_A 225 ASYFCHQWS 233 (257)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEcc
Confidence 999999987
No 368
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.57 E-value=0.00018 Score=67.64 Aligned_cols=79 Identities=24% Similarity=0.341 Sum_probs=55.7
Q ss_pred eEEEEeCCeeeeeee-----eccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecC--ceEEeeecCCCCeEEEEEe
Q psy10772 281 KQTVTWGQSVHLSCF-----VKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG--GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~-----~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~--GLlI~~v~~~DsG~Y~C~~ 353 (378)
...+.+|+++.|.|. ..+. +.+.++|+.++.. +.. ...++....+ -|.|.+++..|+|.|.|.+
T Consensus 129 ~~~~~~g~~v~l~C~~~~~~~~g~---p~~~v~W~k~g~~-----~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 199 (339)
T 3o4o_C 129 PQILTLSTSGVLVCPDLSEFTRDK---TDVKIQWYKDSLL-----LDK-DNEKFLSVRGTTHLLVHDVALEDAGYYRCVL 199 (339)
T ss_dssp EEEEETTSCEEEECCSCTTTCCSS---SCCCBCCEESSCB-----CCT-TCSSEEECTTSSEEEESSCCGGGCEEEEEEE
T ss_pred ceEEECCCCEEEEecCCcccccCC---CCceEEEecCCee-----CCC-CCceeEEcCCcceEEEcccCHhhCeEEEEEE
Confidence 357889999999998 4333 3368999988754 321 2234444443 3999999999999999999
Q ss_pred CC-------eeeEEEeeeeccc
Q psy10772 354 GN-------TVLCTHNLTVDAH 368 (378)
Q Consensus 354 ~~-------~~l~~~~~~v~~~ 368 (378)
.| ..-.+..|.|...
T Consensus 200 ~n~~g~~~~~~~~~~~l~V~~~ 221 (339)
T 3o4o_C 200 TFAHEGQQYNITRSIELRIKKK 221 (339)
T ss_dssp ECCBTTBCCEEEEEEEEEEECC
T ss_pred EECCCCeEEEEEEEEEEEEEcC
Confidence 76 2455677777643
No 369
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.57 E-value=0.00025 Score=58.72 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=49.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----------ccCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|-. ...+|+.... . -|.|.+++.
T Consensus 9 ~~~~~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 87 (127)
T 1kxt_B 9 GGSVQAGGSLRLSCAASGY-TFSSYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRDNAANTAYLQMDSLKP 87 (127)
T ss_dssp CEECCTTCCEEEEEEEC---CCSSSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEECSSSSEEEEEECSCCG
T ss_pred CEEEeCCCCEEEEeEecCC-CccceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEeCCCCEEEEEECcCCH
Confidence 4677889999999998532 12234799998754333222211 0123555442 2 399999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|...+.
T Consensus 88 ~Dsg~Y~C~~~~~ 100 (127)
T 1kxt_B 88 EDTAVYYCAAGPG 100 (127)
T ss_dssp GGCEEEEEEECSS
T ss_pred HHCEEEEEEEEcC
Confidence 9999999999863
No 370
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=97.56 E-value=0.00015 Score=58.94 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....|.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~-~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (120)
T 3b9v_A 9 GGLVQPGGSLRLSCAASGFN-IKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLR 87 (120)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEeCCccEEEEEEeeCcc-ccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCCC
Confidence 46788999999999986321 122479999875433221121 11 123554432 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (120)
T 3b9v_A 88 AEDTAVYYCARWG 100 (120)
T ss_dssp GGGCEEEEEEEEC
T ss_pred HHHCEEEEEEEEc
Confidence 9999999999864
No 371
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.56 E-value=0.00018 Score=64.38 Aligned_cols=74 Identities=20% Similarity=0.190 Sum_probs=48.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeE-ee-----------ccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-KF-----------RSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l-~~-----------~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.|.|+.+........+ .. ....|+....+ -|.|.++
T Consensus 127 ~~~~v~~G~~v~L~C~~~g~p~-~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 205 (240)
T 1moe_A 127 GAELVEPGASVKLSCTASGFNI-KDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSL 205 (240)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CceEEeCCCcEEEEEEEcCccC-CCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcC
Confidence 4567889999999999875432 1247999987422111001 00 01234444432 3999999
Q ss_pred cCCCCeEEEEEeC
Q psy10772 342 EELDAGKYDCWLG 354 (378)
Q Consensus 342 ~~~DsG~Y~C~~~ 354 (378)
+.+|+|.|.|.+.
T Consensus 206 ~~~D~G~Y~C~a~ 218 (240)
T 1moe_A 206 TSEDTAVYYCAPF 218 (240)
T ss_dssp CGGGCEEEEEEEC
T ss_pred CHHHCEEEEEEEE
Confidence 9999999999998
No 372
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=97.56 E-value=7.1e-05 Score=66.51 Aligned_cols=76 Identities=26% Similarity=0.323 Sum_probs=54.6
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCee
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV 357 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~ 357 (378)
....+.+.+|+++.|.|...+.+. +.++|+.++.+ +. .+ ...-|.|.+++..|+|.|.|.+.+..
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~~~p~---~~v~W~~~~~~-----~~--~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 24 NPESKAVLAGQFVKLCCRATGHPF---VQYQWFKMNKE-----IP--NG-----NTSELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp CCCCEEEETTSBEEEECEETTTTS---SEEEEEETTEE-----CT--TC-----CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCCCeEEeCCCcEEEEeeecCCCC---CEEEEEECCEE-----CC--CC-----CCCEEEEccCChhhCeEeEEEEEcCC
Confidence 345678899999999999865433 58999987653 32 11 23569999999999999999998731
Q ss_pred ----eEEEeeeeccc
Q psy10772 358 ----LCTHNLTVDAH 368 (378)
Q Consensus 358 ----l~~~~~~v~~~ 368 (378)
-....|.|...
T Consensus 89 ~~~~s~~~~l~V~~~ 103 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDI 103 (218)
T ss_dssp CCEECCCEEEEEECC
T ss_pred CCceeeEEEEEEEcc
Confidence 23355555543
No 373
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.56 E-value=0.0002 Score=64.44 Aligned_cols=73 Identities=19% Similarity=0.156 Sum_probs=47.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe--------ecc---CcceEeecC-----ceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK--------FRS---DKFIRTVDG-----GLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~--------~~~---~~~~~~~~~-----GLlI~~v~ 342 (378)
...+.+.+|+++.|.|... .+.+.|.|+.+........+. ... ++|+..... -|.|.+|+
T Consensus 9 p~~v~v~~G~~v~L~C~~~----~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 84 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNCDPV----SNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTA 84 (245)
T ss_dssp CSEEEEETTCCEEEEEECC----TTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCC
T ss_pred CceEEecCCCCEEEEEEcC----CCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCC
Confidence 3567899999999999442 223589998753221111010 001 145444332 49999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 85 ~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 85 LEDSAVYFCASSF 97 (245)
T ss_dssp GGGCEEEEEEEEC
T ss_pred HhHCEEEEEEEcc
Confidence 9999999999973
No 374
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.54 E-value=4.2e-05 Score=66.21 Aligned_cols=66 Identities=20% Similarity=0.339 Sum_probs=46.5
Q ss_pred EEEEeCCeeeeeeee-ccCCCCCCCCeEEEEecccCceeeEeecc-------CcceEe--ecCceEEeeecCCCCeEEEE
Q psy10772 282 QTVTWGQSVHLSCFV-KLPASMANQPMSWYHYSKDKGRYQIKFRS-------DKFIRT--VDGGLVIMAVEELDAGKYDC 351 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~-r~~~~La~~~v~W~~~~~~~~~~~l~~~~-------~~~~~~--~~~GLlI~~v~~~DsG~Y~C 351 (378)
..+..|+++.|.|.. .+.+ .|.++|+.++.+ +.... +.++.. ...-|.|.+++.+|+|.|.|
T Consensus 117 ~~~~~g~~~~l~C~~~~~~p---~~~v~W~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 188 (209)
T 1nbq_A 117 SSATIGNRAVLTCSEQDGSP---PSEYTWFKDGIV-----MPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSC 188 (209)
T ss_dssp SEEETTSCEEECCCCCSCBS---CCEEEEEETTCC-----CCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEE
T ss_pred cceecCCEEEEEEeCCCCCC---CceeEEEECCee-----CCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEE
Confidence 357889999999985 4433 368999998764 22100 011111 34459999999999999999
Q ss_pred EeCC
Q psy10772 352 WLGN 355 (378)
Q Consensus 352 ~~~~ 355 (378)
.+.|
T Consensus 189 ~a~n 192 (209)
T 1nbq_A 189 EARN 192 (209)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9988
No 375
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=97.54 E-value=0.00032 Score=74.47 Aligned_cols=115 Identities=16% Similarity=0.250 Sum_probs=70.9
Q ss_pred eEEEEEEEEeeeecCCCeEEEEEEECCCeeEEEE-eceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCC
Q psy10772 224 THLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFV-KVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302 (378)
Q Consensus 224 T~IaVd~v~~~~~~~~~~ytV~flGT~~G~v~~V-~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~L 302 (378)
..+.+..+...| .+.|++. +-...|..... ...+... |. -. .....+.+.+|+++.|.|...+.+.
T Consensus 677 ~~L~i~~v~~~d---~G~Y~C~-a~N~~g~~~~~~~l~V~~~-----P~-~~--~~~~~~~v~~G~~v~l~C~~~g~P~- 743 (816)
T 3dmk_A 677 SVLTIEAVEASH---AGNFTCH-ARNLAGHQQFTTPLNVYVP-----PR-WI--LEPTDKAFAQGSDAKVECKADGFPK- 743 (816)
T ss_dssp EEEEEESCCGGG---CEEEEEE-EECSSCEEEEEEEECEEEE-----EE-EE--ECCCCEEEETTCCEEEECEEEEESC-
T ss_pred eEEEEccCChhh---CEEEEEE-EEeCCccEEEEEEEEEEeC-----Cc-ee--eecccceecCCCcEEEEEEEecCCC-
Confidence 345555555554 5788887 44455654322 1111111 00 00 1223467889999999999976544
Q ss_pred CCCCeEEEEecccC-c-eeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 303 ANQPMSWYHYSKDK-G-RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 303 a~~~v~W~~~~~~~-~-~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
|.|+|+.++... + ...+. .+.++...+.-|.|.+++.+|+|.|.|.+.|
T Consensus 744 --p~i~W~k~~~~~~~~~~~~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 794 (816)
T 3dmk_A 744 --PQVTWKKAVGDTPGEYKDLK--KSDNIRVEEGTLHVDNIQKTNEGYYLCEAIN 794 (816)
T ss_dssp --CEEECCEECSSSTTCCBCCC--CBTTEEEETTEEEECSCCGGGCEEEEEEEEC
T ss_pred --CeEEEEecCCCCCccccccc--cCCCEEecCCEEEECcCChhhCeEEEEEEEe
Confidence 689999986431 1 11122 3344555556699999999999999999998
No 376
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.54 E-value=0.0002 Score=57.67 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=48.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEeccc---CceeeEe-ec-----------cCcceEeec--C----ceEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKD---KGRYQIK-FR-----------SDKFIRTVD--G----GLVI 338 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~---~~~~~l~-~~-----------~~~~~~~~~--~----GLlI 338 (378)
+.+.+.+|+++.|.|...... ....|.|+.+... ++...|- .. ..+|+.... . -|.|
T Consensus 6 ~~~~~~~G~~vtL~C~~~~~~--~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (115)
T 2atp_B 6 SSLLVQTNHTAKMSCEVKSIS--KLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSI 83 (115)
T ss_dssp SEEEECTTSCEEEEEECCSSC--CSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEEE
T ss_pred CCEEEcCCCcEEEEEEecCCC--CcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEEE
Confidence 457888999999999986432 1247999887532 1111110 00 124554432 2 3999
Q ss_pred eeecCCCCeEEEEEeCC
Q psy10772 339 MAVEELDAGKYDCWLGN 355 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~ 355 (378)
.+++.+|+|.|.|....
T Consensus 84 ~~~~~~DsG~Y~C~~~~ 100 (115)
T 2atp_B 84 MNVKPEDSDFYFCATVG 100 (115)
T ss_dssp CSCCGGGCEEEEEEEEC
T ss_pred CCCCHHHCEEEEEeEcc
Confidence 99999999999999864
No 377
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=97.54 E-value=0.00029 Score=60.04 Aligned_cols=74 Identities=19% Similarity=0.279 Sum_probs=49.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee----cCceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV----DGGLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~----~~GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|...... ...+.|+.+...++...|-.. ..+|+... .--|.|.+|+.+|+|.
T Consensus 8 ~~v~v~~G~~vtL~C~~s~~~---~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~ 84 (143)
T 3u6r_L 8 ATLSLSPGERATLSCRASQSV---NKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDFAV 84 (143)
T ss_dssp SEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CEEEEeCCCCEEEEEEECCCC---ceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCCEE
Confidence 457888999999999986543 247999987533222112110 12344332 1239999999999999
Q ss_pred EEEEeCCe
Q psy10772 349 YDCWLGNT 356 (378)
Q Consensus 349 Y~C~~~~~ 356 (378)
|.|.+.+.
T Consensus 85 Y~C~~~~~ 92 (143)
T 3u6r_L 85 YYCQQRSD 92 (143)
T ss_dssp EEEEECSS
T ss_pred EEEEEecC
Confidence 99999864
No 378
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.54 E-value=0.00024 Score=64.63 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=49.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-cCc---eEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DGG---LVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~G---LlI~~v~~~DsG 347 (378)
...+.+.+|+++.|.|.....+. .+.|.|+.+........+.. ..++|+... +.+ |.|.+++.+|+|
T Consensus 156 ~~~~~v~~G~~v~L~C~~~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 233 (256)
T 3juy_B 156 PGTLSLSPGERATFSCRSSHSIR--SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFA 233 (256)
T ss_dssp CSEEEECTTSCEEEEEEESSCCT--TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCS
T ss_pred CCeEEEeCCCCEEEEEEECCCcC--CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCE
Confidence 45678889999999999865322 25899987642221111100 012333322 222 999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|.+.+
T Consensus 234 ~Y~C~~~~ 241 (256)
T 3juy_B 234 LYYCQVYG 241 (256)
T ss_dssp EEEEEECC
T ss_pred EEEEEEee
Confidence 99999987
No 379
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.53 E-value=0.00016 Score=66.05 Aligned_cols=80 Identities=24% Similarity=0.270 Sum_probs=54.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecCceEEeeecCCCCeEEEEEeC-C--
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDGGLVIMAVEELDAGKYDCWLG-N-- 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v~~~DsG~Y~C~~~-~-- 355 (378)
..+.+.+|+++.|.|....++. .+.++|+..+.. .+. .+.++. ....+|.|.+++..|+|.|.|.+. +
T Consensus 97 ~~~~v~~g~~v~L~C~~~~~~~--~~~v~W~~~~~~----~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~ 168 (289)
T 3ejj_X 97 QEVTVVEGQEAVLPCLITDPAL--KDSVSLMREGGR----QVL--RKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGR 168 (289)
T ss_dssp SEEEEETTSCEEECEEESCGGG--GGSEEEEEGGGE----ECC--TTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ceEEEecCCceEeEEEccCCCc--ceEEEEEecCCe----ecC--CCccEEECCCCCEEEeecccccCEEEEEEEEeCCC
Confidence 5678889999999999875443 123999864322 122 333333 345679999999999999999997 3
Q ss_pred -eeeEEEeeeecc
Q psy10772 356 -TVLCTHNLTVDA 367 (378)
Q Consensus 356 -~~l~~~~~~v~~ 367 (378)
..-....|.|..
T Consensus 169 ~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 169 ESTSTGIWLKVNR 181 (289)
T ss_dssp EEECCCEEEEEES
T ss_pred ccccccEEEEEEE
Confidence 333556666654
No 380
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=97.53 E-value=0.00022 Score=58.29 Aligned_cols=74 Identities=19% Similarity=0.191 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|+|..... ......|.|+.+...++...|.. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~-~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (123)
T 2wzp_D 9 GGLVQAGGSLRLSCTASRR-TGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSLK 87 (123)
T ss_dssp CEEEETTCCEEEEEEESSC-CSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSCC
T ss_pred CEEEcCCCcEEEEEEecCC-CccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCCC
Confidence 4678899999999998532 12234799998754322211211 0 123554432 1 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (123)
T 2wzp_D 88 PEDTAIYYCAARS 100 (123)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEec
Confidence 9999999999764
No 381
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=97.53 E-value=0.00023 Score=64.29 Aligned_cols=74 Identities=19% Similarity=0.286 Sum_probs=49.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEeec--C---ceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTVD--G---GLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~~--~---GLlI~~v~~ 343 (378)
...+.+.+|+++.|.|....+ .+.|.|+.+....+...+.. ...+|+.... . -|.|.+|+.
T Consensus 6 p~~v~v~~G~~v~L~C~~~~~----~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 6 PRNKVAVTGGKVTLSCQQTNN----HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp CSEEEEETTCCEEEEEEESSC----CSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred CCeeEEeCCCcEEEEEEeCCC----CceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 346789999999999998432 35799998753222111110 0123444332 1 499999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.+.
T Consensus 82 ~D~G~Y~C~~~~~ 94 (238)
T 1bec_A 82 SQTSVYFCASGGG 94 (238)
T ss_dssp GGCEEEEEEEESC
T ss_pred ccCEEEEEEEecC
Confidence 9999999999764
No 382
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=97.53 E-value=0.00011 Score=59.31 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=47.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec----------cCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR----------SDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~----------~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|+|...... .....|.|+.+...++...|- .. ..+|+.... . -|.|.+++.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~-~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 87 (114)
T 1sjv_A 9 GGLVQAGESLKLSCAASGNT-FSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLEP 87 (114)
T ss_dssp CCCCCTTCCEEEEECCCC------CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEEcCcc-ccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCCH
Confidence 35677899999999985321 123479999875332221121 00 123554432 2 399999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|...+
T Consensus 88 ~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 88 EDTAVYYCYTHY 99 (114)
T ss_dssp GGCSEEEEEECC
T ss_pred HHCEEEEEeEEc
Confidence 999999999875
No 383
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.53 E-value=0.00013 Score=67.67 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=49.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeecC-----ceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVDG-----GLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~~-----GLlI~~v 341 (378)
.+.+.+.+|+++.|.|.....+ .+.|.|+.+...++...+.. ...+|+....+ -|.|.+|
T Consensus 31 p~~v~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v 107 (279)
T 2wbj_D 31 PSWVISKSGTSVKIECRSLDFQ---ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSA 107 (279)
T ss_dssp CSEEEEETTSCEEEEEEESSSC---EEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSC
T ss_pred CCeEEecCCCeEEEEEEeCCCC---CCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccC
Confidence 4568899999999999985332 35799998753221111100 01234444321 4999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.+
T Consensus 108 ~~~D~G~Y~C~~~~ 121 (279)
T 2wbj_D 108 HPEDSSFYICSARD 121 (279)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CccCCEEEEEEEcc
Confidence 99999999999976
No 384
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=97.53 E-value=0.00016 Score=59.00 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=48.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|+|...... .....|.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~-~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (121)
T 1j05_H 9 AELVEPGASVKLSCTASGFN-IKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLT 87 (121)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEeCCCcEEEEEEecCcc-cCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 46788999999999986321 122469998875432221121 10 123544432 1 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (121)
T 1j05_H 88 SEDTAVYYCAPFG 100 (121)
T ss_dssp GGGCEEEEEEEEB
T ss_pred HHHCEEEEEEEEc
Confidence 9999999999864
No 385
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.52 E-value=0.00029 Score=58.69 Aligned_cols=73 Identities=25% Similarity=0.283 Sum_probs=48.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCc---eeeE-eecc-------------CcceEe-ecC----ceE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG---RYQI-KFRS-------------DKFIRT-VDG----GLV 337 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~---~~~l-~~~~-------------~~~~~~-~~~----GLl 337 (378)
..+++.+|+++.|.|....... ..+.|+.+...++ ..-| .... .+|+.. ... -|.
T Consensus 12 ~~~~v~~G~~vtL~C~~s~~~~---~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~~~~~L~ 88 (128)
T 1nez_G 12 KKMDAELGQKVDLVCEVLGSVS---QGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLT 88 (128)
T ss_dssp SCEEECTTCCEEEEEEEESCCS---SCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETTTEEEEE
T ss_pred CeEEEcCCCCEEEEEEeCccCC---CcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCCCEEEEE
Confidence 4568889999999999854322 3699998864433 1112 1101 234443 322 299
Q ss_pred EeeecCCCCeEEEEEeCC
Q psy10772 338 IMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 338 I~~v~~~DsG~Y~C~~~~ 355 (378)
|.+++.+|+|.|.|.+..
T Consensus 89 I~~~~~~Dsg~YyCa~~~ 106 (128)
T 1nez_G 89 LNKFSKENEGYYFCSVIS 106 (128)
T ss_dssp ESSCCGGGCEEEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEcC
Confidence 999999999999999853
No 386
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=97.52 E-value=0.00057 Score=56.31 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=50.3
Q ss_pred cceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec---C---ceEEeeecCC
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD---G---GLVIMAVEEL 344 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~---~---GLlI~~v~~~ 344 (378)
..+.+.+.+|+++.|+|....... ....+.|+.+...++...|-. ...+|+...+ . -|.|.+|+.+
T Consensus 16 ~~~~v~~~~G~svtL~C~~s~~~~-~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~ 94 (122)
T 1hkf_A 16 KAQVLQSVAGQTLTVRCQYPPTGS-LYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREE 94 (122)
T ss_dssp CCEEEEECTTCCEEEEEECCCCTT-CCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGG
T ss_pred CCceEEEecCCCEEEEeEccCCCC-cccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHH
Confidence 356788999999999999753211 123689988754322111211 0124554421 2 2999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|....
T Consensus 95 Dsg~Y~C~v~~ 105 (122)
T 1hkf_A 95 DSGHYWCRIYR 105 (122)
T ss_dssp GCEEEEEEEEC
T ss_pred HCEEEEEEEEc
Confidence 99999999875
No 387
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.52 E-value=3.9e-05 Score=67.07 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=37.5
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE---eecCceEEeeecCCCCeEEEEEeCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR---TVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~---~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+|+++.|.|.....+ +.++|+.++........ ..... ....-|.|.+|+.+|+|.|.|.+.|
T Consensus 109 ~~v~~G~~v~L~C~~~~~p----~~~~W~k~g~~~~~~~~----~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 177 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF----DRFILTEEGDHKLSWTL----DSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSR 177 (196)
T ss_dssp --------CEEEEEESSCC----SEEEEEEC---CCEEEE----ECEECTTSCEEEEEECCCCBTTBCEEEEEEEEE
T ss_pred ccccCCCcEEEEEEcCCCC----CEEEEEccCCccccccc----ccccccCCCceeEEEeeecCcccCeeEEEEEEc
Confidence 4678899999999986553 47999998764110000 00011 1124599999999999999999986
No 388
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.52 E-value=5.1e-05 Score=66.21 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=45.6
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+.+|+++.|.|....++ +.+.|+.++......... ..........-|.|.+|+.+|+|.|.|.+.|.
T Consensus 110 ~v~~G~~v~L~C~~~~~~----~~~~w~k~g~~~~~~~~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 177 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSPM----DTFLLCKERAAHPLLCLR--SEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHG 177 (196)
T ss_dssp EECTTCCEEEEEEEEEEE----EEEEEEETTCCCGGGSEE--EEEEEEEEEEEEEECSCCGGGCEEEEEEEECG
T ss_pred eecCCCeEEEEEecCCCC----CEEEEEeCCCcccceeec--ccccccCcceEEEeCCCcccCCCeEEEEEEcC
Confidence 567899999999987653 368999887541100000 00001123445999999999999999999873
No 389
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.52 E-value=0.0003 Score=57.39 Aligned_cols=74 Identities=24% Similarity=0.276 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c----------cCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R----------SDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~----------~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|...... .....+.|+.+...++...|-. . ..+|+.... . -|.|.+++.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~-~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 87 (121)
T 1kxv_C 9 GGTVPAGGSLRLSCAASGNT-LCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLKP 87 (121)
T ss_dssp CEEECTTCCEEEEEEEESCT-TCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEecCCC-cCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCH
Confidence 46788999999999986321 1224699998754333221211 0 123554432 2 399999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|...+
T Consensus 88 ~Dsg~Y~C~~~~ 99 (121)
T 1kxv_C 88 DDTAMYYCKPSL 99 (121)
T ss_dssp GGCEEEEEEEEE
T ss_pred HHCEEEEEEEEe
Confidence 999999999864
No 390
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.51 E-value=0.00025 Score=72.05 Aligned_cols=85 Identities=16% Similarity=0.188 Sum_probs=58.2
Q ss_pred eeEEEEeCCeeeeeeeecc-CCCCCCCCeEEEEecccCceeeEeeccC-c---ceEeec-----CceEEeeecCCCCeEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKL-PASMANQPMSWYHYSKDKGRYQIKFRSD-K---FIRTVD-----GGLVIMAVEELDAGKY 349 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~-~~~La~~~v~W~~~~~~~~~~~l~~~~~-~---~~~~~~-----~GLlI~~v~~~DsG~Y 349 (378)
..+.+.+|+++.|.|.... +..-+.|.|+|++++.+ +....+ . ++...+ .-|.|.+++.+|+|.|
T Consensus 450 ~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 524 (585)
T 2ocw_A 450 GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQ-----ALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWY 524 (585)
T ss_pred CceeEecCCcEEEEEEecCCCCCCccEEEEEeecCce-----eeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEE
Confidence 4567889999999998852 22334467899998764 321111 1 122222 2499999999999999
Q ss_pred EEEeCCe----eeEEEeeeecccc
Q psy10772 350 DCWLGNT----VLCTHNLTVDAHS 369 (378)
Q Consensus 350 ~C~~~~~----~l~~~~~~v~~~~ 369 (378)
.|.+.|. .-.+..|+|...+
T Consensus 525 ~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 525 WCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEeEeCCCccEEEEEEEEEEeee
Confidence 9999983 2244778888765
No 391
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.51 E-value=0.00038 Score=64.54 Aligned_cols=87 Identities=20% Similarity=0.162 Sum_probs=55.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+ +..+.|.|+.+........|. . ....|+.... --|.|.+|
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYS-FTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCEEEcCCCCEEEEEEeCCcc-cCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 467889999999999986432 112479999874322211110 0 0134554432 24999999
Q ss_pred cCCCCeEEEEEeCCee----e--EEEeeeecc
Q psy10772 342 EELDAGKYDCWLGNTV----L--CTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~----l--~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+.. . ..-.|+|..
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEcc
Confidence 9999999999998731 1 233677765
No 392
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.51 E-value=0.00016 Score=66.55 Aligned_cols=89 Identities=21% Similarity=0.313 Sum_probs=53.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC--CCCCeEEEEecccCceeeEee-------ccCcceEeec-C---ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM--ANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD-G---GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L--a~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~-~---GLlI~~v~~~D 345 (378)
...+.+.+|+++.|.|.....+.. ..+.|.|+.+........|.. ..++|+.... . .|.|.+|+.+|
T Consensus 22 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 101 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAED 101 (268)
T ss_dssp CSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhH
Confidence 345678899999999998654310 124799998753221111110 0123444321 2 49999999999
Q ss_pred CeEEEEEeCCee---e-EEEeeeecc
Q psy10772 346 AGKYDCWLGNTV---L-CTHNLTVDA 367 (378)
Q Consensus 346 sG~Y~C~~~~~~---l-~~~~~~v~~ 367 (378)
+|.|.|.+.+.. . ....|+|..
T Consensus 102 sG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 102 LGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp CEEEEEEECSSSSCEECCCEEEC---
T ss_pred CEEEEEEEecCCCceEcCCEEEEEcc
Confidence 999999998741 1 234566654
No 393
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.51 E-value=0.00027 Score=64.05 Aligned_cols=77 Identities=19% Similarity=0.253 Sum_probs=51.1
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee---------c---cCcceEee-cC-----ceEEee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF---------R---SDKFIRTV-DG-----GLVIMA 340 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~---------~---~~~~~~~~-~~-----GLlI~~ 340 (378)
.+.+.+.+|+++.|.|..... ..+.+.|.|+.+...++...+.. . ..+|+... +. -|.|.+
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 8 QISSTKTLSKTARLECVVSGI-TISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CSEEEEETTCCEEEEEEEESS-CTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CceEEecCCCcEEEEEEeCCc-cccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 356789999999999998754 12335899998753222111110 0 23454432 12 399999
Q ss_pred ecCCCCeEEEEEeCCe
Q psy10772 341 VEELDAGKYDCWLGNT 356 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~~ 356 (378)
++.+|+|.|.|...+.
T Consensus 87 v~~~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 87 VEKQDIATYYCALWEA 102 (242)
T ss_dssp CCGGGCEEEEEEEEEE
T ss_pred CCcccCEEEEEeeecC
Confidence 9999999999999864
No 394
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.51 E-value=6.9e-05 Score=65.28 Aligned_cols=73 Identities=15% Similarity=0.196 Sum_probs=48.9
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc----eEEeeecCCCCeEEEEEeCC---
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG----LVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G----LlI~~v~~~DsG~Y~C~~~~--- 355 (378)
.+.+|+++.|.|...+.+. |.|+|+.++.+... .......| |.|.+++..|+|.|.|.+.|
T Consensus 114 ~~~~g~~v~l~C~~~g~P~---p~v~W~~~~~~~~~---------~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g 181 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPL---AEVSWQNVSVPANT---------SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHM 181 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSC---CEEEETTCCSCCEE---------EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTT
T ss_pred ecCCCCeEEEEEEccccCC---ceEEEEeCCCCccC---------ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCc
Confidence 4567999999999876443 68999887654111 11112223 45779999999999999987
Q ss_pred eeeEEEeeeecc
Q psy10772 356 TVLCTHNLTVDA 367 (378)
Q Consensus 356 ~~l~~~~~~v~~ 367 (378)
..-++..|.|.+
T Consensus 182 ~~~~~~~l~v~~ 193 (202)
T 3bp6_B 182 KELTSAIIDPLS 193 (202)
T ss_dssp TEEEEEEECC--
T ss_pred ccccEEEEEecC
Confidence 455666666644
No 395
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=97.50 E-value=0.00067 Score=55.96 Aligned_cols=89 Identities=12% Similarity=0.094 Sum_probs=57.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec---Cc---eEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD---GG---LVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~---~G---LlI~~v~~~D 345 (378)
...+.+.+|+++.|.|..... .....+.|+.+....+...|... ..+|+...+ .| |.|.+|+.+|
T Consensus 9 p~~v~~~~G~svtL~C~~s~~--~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~D 86 (124)
T 2nms_A 9 PTTVNGLERGSLTVQCVYRSG--WETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTD 86 (124)
T ss_dssp CSEEEEETTCCEEEEEEECTT--CTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGG
T ss_pred ccEEEEeCCCCEEEEeEEeCC--cccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHH
Confidence 356788999999999987532 21224899887542221112111 123444332 22 8999999999
Q ss_pred CeEEEEEeCC---eeeEEEeeeecccc
Q psy10772 346 AGKYDCWLGN---TVLCTHNLTVDAHS 369 (378)
Q Consensus 346 sG~Y~C~~~~---~~l~~~~~~v~~~~ 369 (378)
+|.|.|.... +......|+|...+
T Consensus 87 sg~Y~C~~~~~~~~~~~~v~L~V~~~~ 113 (124)
T 2nms_A 87 ADTYWCGIEKTGNDLGVTVQVTIDPAP 113 (124)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CEEEEEEEEcCCCCccEEEEEEEeCCC
Confidence 9999999874 45566788887754
No 396
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=97.50 E-value=0.00032 Score=57.93 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=55.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... +....|.|+.+...++...|- .. ..+|+.... + -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (127)
T 1mqk_H 9 GDLVQPGGSLKLSCAASGFT-FSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLK 87 (127)
T ss_dssp CCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEeCCCc-cCCcEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEECCCC
Confidence 45788899999999986321 122469999875433322221 11 123554432 1 39999999
Q ss_pred CCCCeEEEEEeCCe---ee---EEEeeeeccccc
Q psy10772 343 ELDAGKYDCWLGNT---VL---CTHNLTVDAHSN 370 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~---~l---~~~~~~v~~~~c 370 (378)
.+|+|.|.|...+. .+ ..-.|+|....+
T Consensus 88 ~~Dsg~Y~C~~~~~~~~~~~fg~gT~L~V~~~~~ 121 (127)
T 1mqk_H 88 SEDTAMYYCVRHEYYYAMDYWGQGTTVTVSSAWR 121 (127)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC
T ss_pred HHHCEEEEEEEecCCcCcceECCCEEEEEeCCcc
Confidence 99999999998652 21 233566655443
No 397
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.50 E-value=8.2e-05 Score=59.90 Aligned_cols=61 Identities=26% Similarity=0.399 Sum_probs=40.2
Q ss_pred EEeCCeeeeeeeeccCCCCC--CCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 284 VTWGQSVHLSCFVKLPASMA--NQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La--~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+|+++.|.|....++.-. ...+.|+.++.. +. . .....-|.|.+|+..|+|.|.|.+.+
T Consensus 19 v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~-----l~--~----~~~~~~l~i~~v~~~dsG~Y~C~~~~ 81 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRI-----VQ--S----RGLSSEFQIPTASEDHSGSYWCEAAT 81 (108)
T ss_dssp CBTTCCEEEEEEC---------CCEEEEEETTEE-----EE--E----EESCCEEEESSCCGGGCEEEEEEEEC
T ss_pred CCCCCcEEEEEcccCCCCCcCcceEEEEEECCcC-----cc--C----CCcccEEEeCccCcccCeEEEEEEEe
Confidence 56799999999985432200 002789887643 32 1 12345589999999999999999986
No 398
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.50 E-value=0.00028 Score=65.45 Aligned_cols=74 Identities=19% Similarity=0.374 Sum_probs=46.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCcee--------eEee--ccCcceEee-----cCceEEeeecCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY--------QIKF--RSDKFIRTV-----DGGLVIMAVEEL 344 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~--------~l~~--~~~~~~~~~-----~~GLlI~~v~~~ 344 (378)
..+++.+|+++.|+|....+.. .+.|+|+.++.+.... .... ....|+... +.-|.|.+++.+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 84 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNET--ITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFS 84 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSC--EEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGG
T ss_pred CEeEEEcCCcEEEEEEecCCCC--CcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHH
Confidence 3578899999999998753322 1358998765431110 0000 011233221 234999999999
Q ss_pred CCeEEEEEeCC
Q psy10772 345 DAGKYDCWLGN 355 (378)
Q Consensus 345 DsG~Y~C~~~~ 355 (378)
|+|.|.|.+.+
T Consensus 85 D~G~Y~C~a~n 95 (308)
T 4fom_A 85 DSGKYICKAVT 95 (308)
T ss_dssp GCEEEEEEEEE
T ss_pred HCEEEEEEEee
Confidence 99999999854
No 399
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=97.49 E-value=0.00015 Score=58.66 Aligned_cols=76 Identities=14% Similarity=0.267 Sum_probs=49.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c---------cCcceEeec---C---ceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R---------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~---------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+.+|+++.|.|...... .....+.|+.+...++...|-. . .++|+.... . -|.|.+++
T Consensus 6 p~~v~~~~G~~vtL~C~~~~~~-~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 84 (114)
T 1u9k_A 6 EERYDLVEGQTLTVKCPFNIMK-YANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQ 84 (114)
T ss_dssp CEEEEECTTCCEEEEEECCHHH-HTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCC
T ss_pred CccEEEeCCCcEEEEeEecCcc-cCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCCC
Confidence 4567899999999999975321 1123689998753322211211 0 124544432 1 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 85 ~~Dsg~Y~C~~~~ 97 (114)
T 1u9k_A 85 VTDSGLYRCVIYH 97 (114)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hHHCEEEEEEEec
Confidence 9999999999876
No 400
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.49 E-value=4.9e-05 Score=68.48 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=43.9
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+|+++.|.|.....+ .+.+.|+.++.. +. ...........|.|.+|+.+|+|.|.|.+.+
T Consensus 115 ~~v~~G~~v~L~C~~~~~~---~~~~~W~k~g~~-----~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 178 (218)
T 1uct_A 115 LVLMPGENISLTCSSAHIP---FDRFSLAKEGEL-----SL--PQHQSGEHPANFSLGPVDLNVSGIYRCYGWY 178 (218)
T ss_dssp SEECTTCCCEEEEECSSSC---CSEEEEEETTCS-----SC--CSEEECSSSEEEECCSCCGGGCEEEEEEEEC
T ss_pred CccCCCCCEEEEEeCCCCC---CCEEEEEECCCc-----cc--ccccCCCccCEEEEccCCcccCEEEEEEEEc
Confidence 4678999999999432222 247899988754 21 1111111234589999999999999999975
No 401
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=97.48 E-value=0.00022 Score=64.09 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=49.3
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeecCc------eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVDGG------LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~~G------LlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......|.|+.+....+...+-. ...+|+....++ |.|.+++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGY-TFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEeecc-eecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 4678899999999998642 12224799988754333221210 112355443322 9999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 88 ~~DsG~Y~C~~~~ 100 (230)
T 3n9g_H 88 SEDTAVYYCARDW 100 (230)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hhhCEEEEEEEcc
Confidence 9999999999875
No 402
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.48 E-value=0.00018 Score=66.61 Aligned_cols=76 Identities=16% Similarity=0.065 Sum_probs=50.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.|.|+.+........|. . ..++|+....+ -|.|.++
T Consensus 142 ~~~~v~~G~~v~L~C~~~g~~~-~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 220 (276)
T 3auv_A 142 GGGLVQPGGSLRLSCAASGFTI-SDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSL 220 (276)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CceEecCCCeEEEEEEecCccC-CCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCC
Confidence 4567889999999999874321 12579999875321111110 0 11335544432 4999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.|.
T Consensus 221 ~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 221 RAEDTAVYYCARFVF 235 (276)
T ss_dssp CGGGCEEEEEEEECS
T ss_pred ChhHCEEEEEEEEcC
Confidence 999999999999885
No 403
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=97.48 E-value=0.00033 Score=70.38 Aligned_cols=85 Identities=20% Similarity=0.220 Sum_probs=54.9
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC----ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG----GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~----GLlI~~v~~~DsG~ 348 (378)
..+.+.+|+++.|.|...+.+ .+.|+|+.+........+.. ..++|+..... .|.|.+++.+|+|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 8 PSASGTPGQRVTISCTGTSSG---SITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred CceEEecCCcEEEEEEEeccC---CceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 457889999999999986543 35799998753211111110 01234433222 39999999999999
Q ss_pred EEEEeCCee------eEEEeeeecc
Q psy10772 349 YDCWLGNTV------LCTHNLTVDA 367 (378)
Q Consensus 349 Y~C~~~~~~------l~~~~~~v~~ 367 (378)
|.|.+.+.. -....|+|..
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~ 109 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLG 109 (523)
T ss_pred EEEEEccCCCccccccCceEEEecc
Confidence 999999732 1345666743
No 404
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.48 E-value=0.00022 Score=57.71 Aligned_cols=74 Identities=24% Similarity=0.269 Sum_probs=47.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeecc---CcceE-e-----e---cCceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS---DKFIR-T-----V---DGGLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~---~~~~~-~-----~---~~GLlI~~v~~~Ds 346 (378)
.+.+.+.+|+++.|+|...... +.+.|.|+.+... .+.-+.... ..|+. . . .--|.|.+|+.+|+
T Consensus 14 p~~~~~~~G~~v~L~C~~~~~~--~~~~v~W~r~~~~-~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~Ds 90 (120)
T 2yz1_A 14 EKSVSVAAGDSTVLNCTLTSLL--PVGPIKWYRGVGQ-SRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTPEDA 90 (120)
T ss_dssp SSEEEECTTCCEEECCEESCCC--SCCCEEEEESSST-TCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCGGGC
T ss_pred CceEEEeCCCCEEEEeEECCCC--CCcEEEEEcCCCC-CcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCHHHC
Confidence 4567899999999999986431 2347999987522 111121101 01211 0 0 12499999999999
Q ss_pred eEEEEEeCC
Q psy10772 347 GKYDCWLGN 355 (378)
Q Consensus 347 G~Y~C~~~~ 355 (378)
|.|.|.+.+
T Consensus 91 G~Y~C~~~~ 99 (120)
T 2yz1_A 91 GTYYCVKFQ 99 (120)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999764
No 405
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.48 E-value=0.0001 Score=72.38 Aligned_cols=69 Identities=13% Similarity=-0.038 Sum_probs=52.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.|+|++++.. +. + .|-++ +++.+|+|.|.|.+.| .
T Consensus 378 ~~~~~~~g~~~~l~C~~~g~P~---p~i~W~~~g~~-----~~--~--------~g~~~-~v~~~d~G~Y~C~a~N~~G~ 438 (450)
T 1z7z_I 378 GNWTWPENSQQTPMCQAWGNPL---PELKCLKDGTF-----PL--P--------IGESV-TVTRDLEGTYLCRARSTQGE 438 (450)
T ss_dssp SEEEEETTCEECCCCCCEEESC---CEEEEEETTTE-----EC--C--------TTSCE-ECCGGGCEEEEEEEEETTEE
T ss_pred CceeEcCCCeEEEEEecccCCC---CcEEEEECCcc-----cC--C--------CCCeE-eEehhhCeEEEEEEEeCCCc
Confidence 4578889999999999876554 68999988652 21 1 23223 7899999999999998 6
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-++..|.|.+
T Consensus 439 ~~~~~~l~V~~ 449 (450)
T 1z7z_I 439 VTREVTVNVLS 449 (450)
T ss_dssp EEEEEEEEEEC
T ss_pred eeEEEEEEEEc
Confidence 67777787764
No 406
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=97.47 E-value=0.00047 Score=55.97 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe--------eccCcceEee---cC---ceEEeeecCCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK--------FRSDKFIRTV---DG---GLVIMAVEELD 345 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~--------~~~~~~~~~~---~~---GLlI~~v~~~D 345 (378)
..+.+.+|+++.|.|....... ...+.|+.+...++...|- ....+|+... .. -|.|.+++.+|
T Consensus 7 ~~~~v~~G~~vtL~C~~~~~~~--~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~D 84 (117)
T 3bp6_A 7 AWLTVSEGANATFTCSLSNWSE--DLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRND 84 (117)
T ss_dssp SEEEECTTCCEEEEEEESSCCT--TCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCGGG
T ss_pred CcEEEeCCCCEEEEeEeecCCC--CCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCHHH
Confidence 4578899999999999864321 2469999875432221121 1123455442 22 29999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|...+
T Consensus 85 sg~Y~C~~~~ 94 (117)
T 3bp6_A 85 SGIYLCGAIS 94 (117)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999764
No 407
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.47 E-value=0.00011 Score=64.61 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=44.5
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcce-EeecCceEEeeecCCCCeEEEEEeC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI-RTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~-~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+|+++.|.|....+ .+.+.|+.++........ ..... ......|.|.+++.+|+|.|.|.+.
T Consensus 17 ~~v~~G~~v~L~C~~~~~----~~~~~w~k~g~~~~~~~~---~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDVM----FEHFLLHREGMFNDTLRL---IGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp SEEETTCCEEEEEEESSC----CSEEEEEEESSSCEEEEE---ECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CccCCCCcEEEEEeccCC----CCEEEEEECCCcCCccee---eeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 467889999999998532 247999988764211000 00000 1123459999999999999999984
No 408
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.47 E-value=0.00028 Score=63.82 Aligned_cols=74 Identities=16% Similarity=0.052 Sum_probs=48.3
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e----------ccCcceEeec------CceEEeeecCC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F----------RSDKFIRTVD------GGLVIMAVEEL 344 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~----------~~~~~~~~~~------~GLlI~~v~~~ 344 (378)
..+.+|+++.|.|...+.+. +.+.|.|+.+........|. . ..+.|+.... .-|.|.+|+.+
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~-~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 210 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSI-TSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 210 (242)
T ss_dssp SEECTTSCEEEEEEEESSCG-GGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGG
T ss_pred ceecCCCeEEEEEEEEcccc-CCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcC
Confidence 45888999999999875431 22579999874321111110 0 0133444332 14999999999
Q ss_pred CCeEEEEEeCCe
Q psy10772 345 DAGKYDCWLGNT 356 (378)
Q Consensus 345 DsG~Y~C~~~~~ 356 (378)
|+|.|.|.+.|.
T Consensus 211 D~G~Y~C~a~~~ 222 (242)
T 2znx_A 211 DTATYYCANXDG 222 (242)
T ss_dssp GCEEEEEEETTS
T ss_pred cCEEEEEeccCC
Confidence 999999999873
No 409
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.47 E-value=7.8e-05 Score=63.84 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCee-e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV-L 358 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~-l 358 (378)
..+.+.+|+++.|.|.....+. ...++|+.++.. +. . ...-|.|.+++..|+|.|.|.+.+.. -
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~--~~~i~W~~~~~~-----~~--~------~~~~L~i~~v~~~d~G~Y~C~~~~~~~s 76 (176)
T 1f2q_A 12 PWNRIFKGENVTLTCNGNNFFE--VSSTKWFHNGSL-----SE--E------TNSSLNIVNAKFEDSGEYKCQHQQVNES 76 (176)
T ss_dssp SCSEEETTCCEEEECCTTCC------CCEEEETTEE-----CS--C------CSSEEEECSCCGGGCEEEEEECTTSSCC
T ss_pred CCcceecCCcEEEEEeCCCCCC--cceEEEEECCeE-----CC--C------CceEEEEeccceecCEEEEEEcCCcccc
Confidence 3457889999999999854432 125899887643 32 1 24568999999999999999998722 2
Q ss_pred EEEeeeec
Q psy10772 359 CTHNLTVD 366 (378)
Q Consensus 359 ~~~~~~v~ 366 (378)
....|.|.
T Consensus 77 ~~~~l~V~ 84 (176)
T 1f2q_A 77 EPVYLEVF 84 (176)
T ss_dssp CCEEEEEE
T ss_pred ccEEEEEe
Confidence 33444444
No 410
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=97.47 E-value=0.00033 Score=57.88 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=49.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec----------cCcceEeec---C---ceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
..+.+.+|+++.|+|.....+ .....+.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 8 ~~~~~~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 86 (124)
T 1yc7_A 8 GGGSVQAGGSLRLSCAVSGST-YSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQ 86 (124)
T ss_dssp CCEEECTTCCEEEEEEEESCC-SSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCCEEEEEEEeCCC-cCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 356788999999999986321 122469999876433322221 11 123544432 1 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 87 ~~Dsg~Y~C~~~~ 99 (124)
T 1yc7_A 87 REDTGMYYCQIQC 99 (124)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999864
No 411
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.47 E-value=0.00012 Score=68.20 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=50.0
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|..... .++.+.+.|+.+........+.. ....|+....+ -|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTSSEV-TFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCEECTTCCEEEEEEECCS-CCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCEEECCCCcEEEEEEeecc-CCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 45678899999999998642 23345799987542211100100 11235554433 3999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 87 RSEDTAVYYCARSPS 101 (280)
T ss_dssp CSTTCEECCEEECSS
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999875
No 412
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=97.46 E-value=0.00072 Score=57.84 Aligned_cols=94 Identities=22% Similarity=0.154 Sum_probs=57.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecc---cCceeeEee----------c--cCcceEee--c----CceEE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSK---DKGRYQIKF----------R--SDKFIRTV--D----GGLVI 338 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~---~~~~~~l~~----------~--~~~~~~~~--~----~GLlI 338 (378)
+.+.+.+|+++.|.|...... ....+.|+.+.. .++..-|-. . ..+|+... . --|.|
T Consensus 9 ~~~~v~~G~svtL~C~~s~~~--~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I 86 (150)
T 3dmm_D 9 SSLLVQTNHTAKMSCEVKSIS--KLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLSI 86 (150)
T ss_dssp SEEEEETTSCEEEEEECCCSS--CCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSSCEEEE
T ss_pred CeEEEeCCCcEEEEEEecCCC--CCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCEEEEEE
Confidence 467889999999999986431 223689998753 122111210 0 13455543 1 23999
Q ss_pred eeecCCCCeEEEEEeCCeeeEEE----eeeecccccCCCCCC
Q psy10772 339 MAVEELDAGKYDCWLGNTVLCTH----NLTVDAHSNVADAPT 376 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~~~l~~~----~~~v~~~~c~~~~~~ 376 (378)
.+++.+|+|.|.|......-..| .|+|.+.--+.| ||
T Consensus 87 ~~l~~~Dsg~Y~C~~~~~~~~~fG~GT~L~V~~~lp~t~-Pt 127 (150)
T 3dmm_D 87 MNVKPEDSDFYFCATVGSPKMVFGTGTKLTVVDVLPTTA-PT 127 (150)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEECCCEEEEEESCCCCCC-C-
T ss_pred CCCChhhCEEEEEEEecCCcceECCCEEEEEeCCCCCCC-Cc
Confidence 99999999999999865221122 677776544444 44
No 413
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.46 E-value=0.00033 Score=63.16 Aligned_cols=76 Identities=20% Similarity=0.383 Sum_probs=50.8
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------c-cCcceEee-cC-----ceEEeee
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------R-SDKFIRTV-DG-----GLVIMAV 341 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~-~~~~~~~~-~~-----GLlI~~v 341 (378)
.+.+.+.+|+++.|.|...... +..+.|.|+.+....+..-|.. . ..+|+... +. -|.|.++
T Consensus 8 p~~v~~~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 8 EISISRPRDETAQISCKVFIES-FRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp CSEEEEETTSCEEEEEEECCGG-GGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred CCEEEEeCCCcEEEEEEeeccc-cCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 4567889999999999986431 1234799998753222111110 0 23455443 22 3999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|...+
T Consensus 87 ~~~D~G~Y~C~~~~ 100 (230)
T 1ypz_F 87 EEEDEAIYYCSYGE 100 (230)
T ss_dssp CGGGCSEEEEEECC
T ss_pred ChhhCEEEEEEEEC
Confidence 99999999999986
No 414
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.46 E-value=0.00026 Score=65.82 Aligned_cols=88 Identities=20% Similarity=0.249 Sum_probs=55.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+ .+.+.|.|+.+........|.. ..++|+.... .-|.|.+|
T Consensus 34 ~~~~v~~G~~v~L~C~~~g~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 34 GAELVRSGTSVKLSCTASGFN-IKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCEEEETTCCEEEEEEEESSC-GGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCEEEeCCCeEEEEEeccCCC-CCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 457889999999999986432 1235799998753221111100 1124544332 23999999
Q ss_pred cCCCCeEEEEEeCCee----e----EEEeeeeccc
Q psy10772 342 EELDAGKYDCWLGNTV----L----CTHNLTVDAH 368 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~----l----~~~~~~v~~~ 368 (378)
+.+|+|.|.|.+.+.. . ....|+|...
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~ 147 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSG 147 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC-
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecC
Confidence 9999999999997642 1 2236777654
No 415
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=97.46 E-value=0.0004 Score=57.45 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=49.2
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEeec----CceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTVD----GGLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~~----~GLlI~~v~~~DsG~ 348 (378)
..+.+.+|+++.|.|...... .....+.|+.+...++...|-.. ..+|+.... --|.|.+++.+|+|.
T Consensus 8 ~~v~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~DsG~ 86 (123)
T 3t0v_A 8 PSVSGTPGQKVTIFCSGSSSN-VEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLRSEDEAD 86 (123)
T ss_dssp CCEEECTTCCEEEEEECCTTT-TTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CeEEEcCCCCEEEEEecCCCc-cCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCCHHHCEE
Confidence 357889999999999986432 12247999987543332212111 123444321 239999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|...+
T Consensus 87 Y~C~~~~ 93 (123)
T 3t0v_A 87 YYCLSWD 93 (123)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999864
No 416
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.46 E-value=0.0002 Score=64.52 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=48.3
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeec------CceEEeeecC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVD------GGLVIMAVEE 343 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~------~GLlI~~v~~ 343 (378)
..+.+|+++.|.|...+.+ .+.+.+.|+.+........|. . ..++|+.... .-|.|.+++.
T Consensus 137 ~~v~~G~~v~L~C~~~~~~-~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 215 (247)
T 1svz_A 137 ELKKPGETVKISCKATNYA-FTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN 215 (247)
T ss_dssp EEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG
T ss_pred eeecCCCcEEEEEEEcCcc-cCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh
Confidence 4588899999999986542 122479999875321111010 0 0134444332 1499999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.|.
T Consensus 216 ~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 216 EDTATYFCVRDRH 228 (247)
T ss_dssp GGCEEEEEEEEEG
T ss_pred hHCEEEEEEEecc
Confidence 9999999999873
No 417
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=97.46 E-value=0.00089 Score=53.84 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=54.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEec-cc-CceeeEe-e-------ccCcceEee---cC---ceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYS-KD-KGRYQIK-F-------RSDKFIRTV---DG---GLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~-~~-~~~~~l~-~-------~~~~~~~~~---~~---GLlI~~v~ 342 (378)
.+.+.+.+|+++.|+|...... .....+.|+.+. .. ++...|- . +.+.|+... .. -|.|.+|+
T Consensus 3 ~~~v~~~~G~~vtL~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 81 (116)
T 3bia_X 3 EDTIIGFLGQPVTLPCHYLSWS-QSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTN 81 (116)
T ss_dssp CEEEEEETTSCEEECCBCTTCC-TTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCC
T ss_pred ccEEEEeeCCcEEEEEEeeCCC-CCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCC
Confidence 4567899999999999875211 112258999876 32 1111111 0 112233322 12 39999999
Q ss_pred CCCCeEEEEEeCC-----eeeEEEeeeeccc
Q psy10772 343 ELDAGKYDCWLGN-----TVLCTHNLTVDAH 368 (378)
Q Consensus 343 ~~DsG~Y~C~~~~-----~~l~~~~~~v~~~ 368 (378)
.+|+|.|.|.... +......|.|...
T Consensus 82 ~~Dsg~Y~C~v~~~~~~~~~~~~v~L~V~~~ 112 (116)
T 3bia_X 82 RGDSGVYCCRIEVPGWFNDVKKNVRLELRRA 112 (116)
T ss_dssp GGGCEEEEEEEECSSSSCCEEEEEEEEEECC
T ss_pred hhHCEEEEEEEEcCCcccceEEEEEEEEecC
Confidence 9999999999853 3345566666554
No 418
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.45 E-value=5.1e-05 Score=60.75 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=41.1
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE--eecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR--TVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~--~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|++|.|.|....+. ..+.|+.++.. +. . .+.. ....-|.|.+|+.+|+|.|.|.+.+
T Consensus 15 ~v~~G~~VtL~C~~~~~~----~~~~w~k~g~~-----~~--~-~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n 77 (105)
T 2vsd_A 15 GVSLGDTVTLRCHLPRMA----AWVQLWLNGTL-----RF--D-KEKDKEQDAAEFSFAVTNLEDAGTYQCRYQV 77 (105)
T ss_dssp SCCTTCEEEEEEECCSSC----EEEEEEETTEE-----EE--E-EEECTTCSEEEEEEECCSGGGCEEEEEEEEE
T ss_pred CcCcCCCEEEEEEcCCCC----cEEEEEECCcc-----ce--e-eeccCCCCEEEEEECCCCHHHCeEEEEEEEc
Confidence 467799999999985432 25678766532 21 0 1110 1123489999999999999999876
No 419
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=97.45 E-value=0.0002 Score=73.02 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=57.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceee-Eee----ccCcceEeecC-ceEEeeecCCCCeEEEEE
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ-IKF----RSDKFIRTVDG-GLVIMAVEELDAGKYDCW 352 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~-l~~----~~~~~~~~~~~-GLlI~~v~~~DsG~Y~C~ 352 (378)
.+.+.+..|+++.|.|.... ..+.+.|+|+.++.+..... +.. .-+.|.....+ .|.|.+|+.+|+|.|.|.
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~ 450 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAP--KKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQ 450 (581)
T ss_dssp CEEEEEETTSCEEECCTTCC--SSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEE
T ss_pred hcccceecCCcEEEeeeecC--CCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEE
Confidence 45678999999999998721 13345899999875311000 000 00223333444 499999999999999999
Q ss_pred eCC---e-eeEEEeeeecc
Q psy10772 353 LGN---T-VLCTHNLTVDA 367 (378)
Q Consensus 353 ~~~---~-~l~~~~~~v~~ 367 (378)
+.+ . ......|+|..
T Consensus 451 ~~n~~~~~~~~~~~l~V~~ 469 (581)
T 3o3u_N 451 AMNRNGKETKSNYRVRVYQ 469 (581)
T ss_dssp EECTTSCEEEEEEEEEEEB
T ss_pred EEcCCCceeEEEEEEEEEc
Confidence 987 2 25667888765
No 420
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.45 E-value=0.00018 Score=65.71 Aligned_cols=78 Identities=23% Similarity=0.202 Sum_probs=52.7
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+..|+++.|.|.. +.+. +.+.|.|.......++ + +......-|.|.+|+.+|+|.|.|.+.+ +
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~-P~~~i~W~~~~~~l~~--~------~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACAD-RGASVQWRGLDTSLGA--V------QSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSS-TTCEEEEESSTTTTCC--E------EEESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CceEEeCCCCEEEEEEC-CCCC-CCcceEEeecccccCc--E------EecCCccEEEECccCcccCceEEEEEEeCCCc
Confidence 34788999999999998 4433 2227999764332111 1 1111223389999999999999999987 4
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-.+..|+|-.
T Consensus 85 ~~~~~~ltV~~ 95 (210)
T 1gsm_A 85 FQHTVQLLVYA 95 (210)
T ss_dssp EEEEEEEEEEB
T ss_pred eEEEEEEEEEe
Confidence 44567777764
No 421
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=97.44 E-value=0.00045 Score=62.65 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=49.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCC--CCCeEEEEecccCceeeE-eec----------------cCcceEeecCc-----
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMA--NQPMSWYHYSKDKGRYQI-KFR----------------SDKFIRTVDGG----- 335 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La--~~~v~W~~~~~~~~~~~l-~~~----------------~~~~~~~~~~G----- 335 (378)
..+.+.+|+++.|.|.....+ .. ...|.|+.+...++...| ... ..+|+....++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVSGDS-TAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp SCSEECTTSCEEEEEEEESSC-TTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCEEEcCCCCEEEEEEEcCCc-ccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 346788999999999986432 21 236899987543222111 001 12455444322
Q ss_pred -eEEeeecCCCCeEEEEEeCCe
Q psy10772 336 -LVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 336 -LlI~~v~~~DsG~Y~C~~~~~ 356 (378)
|.|.+|+.+|+|.|.|.+.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~ 108 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGG 108 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecC
Confidence 999999999999999998754
No 422
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=97.44 E-value=0.00015 Score=61.75 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=44.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCC-CeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQ-PMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~-~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. | .++|+.++.. +. ... ....-|.|.++ .|+|.|.|.+.|
T Consensus 106 ~~~~~~~g~~~~l~C~~~g~p~---p~~v~W~~~~~~-----~~--~~~---~~~~~L~i~~~--~d~G~Y~C~a~N 167 (182)
T 1rhf_A 106 KDLAVPPNAPFQLSCEAVGPPE---PVTIVWWRGTTK-----IG--GPA---PSPSVLNVTGV--TQSTMFSCEAHN 167 (182)
T ss_dssp CCEEECTTCCEEEEEEEECSSS---CCEEEEEETTEE-----CS--CSE---ESSEEEEECCC--SSCEEEEEEEEE
T ss_pred cceEecCCCEEEEEeEecCCCC---CCEEEEEcCCeE-----CC--CCC---CCceEEEEecc--ccCeEEEEEEEC
Confidence 3467888999999999876544 5 7999998754 31 111 13445777777 599999999997
No 423
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.44 E-value=1.9e-05 Score=82.83 Aligned_cols=78 Identities=21% Similarity=0.351 Sum_probs=0.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cCceEEeeecCCCCeEEEEEeCC---
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DGGLVIMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~~--- 355 (378)
.+.+.+|+++.|.|...+.+. |.|+|+.++.+ |. .+.++... ..-|.|.+++.+|+|.|.|.+.|
T Consensus 675 ~~~v~~g~~~~l~C~~~g~P~---p~v~W~k~g~~-----l~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 744 (772)
T 3v2a_R 675 NQTTSIGESIEVSCTASGNPP---PQIMWFKDNET-----LV--EDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLG 744 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEeCCCCEEEEEEeCccCC---CeEEEEECCeE-----Cc--CCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCc
Confidence 356778999999999875443 58999998765 43 33333322 34499999999999999999998
Q ss_pred eeeEEEeeeeccc
Q psy10772 356 TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ~~l~~~~~~v~~~ 368 (378)
..-++-.|+|.+.
T Consensus 745 ~~~~~~~l~V~~~ 757 (772)
T 3v2a_R 745 CAKVEAFFIIEGA 757 (772)
T ss_dssp -------------
T ss_pred ceeEEEEEEEECC
Confidence 4556777777654
No 424
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=97.44 E-value=0.00028 Score=58.31 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=46.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|- .. ..+|+.... + -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (127)
T 2x1q_A 9 GGLVQPGGSLRLSCAASGR-TFSNYRMGWFRQAPGKEREFVATISQSGAATAYADSVKGRFTFSRDNAKNLLYLEMLSLE 87 (127)
T ss_dssp CEEECTTCCEEEEEC-------CCSEEEEEEECTTSCCEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEeCCc-ccCCcEEEEEEECCCCCCEEEEEEecCCCceeeCcccCCcEEEEEeCCCCEEEEEEcCCC
Confidence 4678899999999997532 1122469999885433322121 11 123554432 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (127)
T 2x1q_A 88 PEDTAVYYCAASS 100 (127)
T ss_dssp GGGCEEEEEEEEC
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999865
No 425
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.44 E-value=0.00016 Score=64.35 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=47.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec----CceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD----GGLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~----~GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|...+.+. +...|.|+.+........+.. ...+|+.... ..|.|.+++.+|+|.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 27 PSASGTPGQRVTISCSGSSSNI-GSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp SCCCBCTTCEEEEEEECCTTTT-TTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CcEEeeCCCcEEEEEEecCCCC-CCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 4556788999999999865322 111599998743211111110 0123433321 149999999999999
Q ss_pred EEEEeCCe
Q psy10772 349 YDCWLGNT 356 (378)
Q Consensus 349 Y~C~~~~~ 356 (378)
|.|.+.+.
T Consensus 106 Y~C~~~~~ 113 (234)
T 2j6e_L 106 YYCATWDD 113 (234)
T ss_dssp EEEEEEET
T ss_pred EEEEEEcC
Confidence 99999863
No 426
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=97.44 E-value=0.00044 Score=63.02 Aligned_cols=74 Identities=20% Similarity=0.225 Sum_probs=49.9
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee----------ccCcceEeec-----CceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF----------RSDKFIRTVD-----GGLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~----------~~~~~~~~~~-----~GLlI~~v~~ 343 (378)
.+.+.+.+|+++.|.|....+ .+.|.|+.+...++..-|.. ....|+.... .-|.|.+++.
T Consensus 10 p~~v~v~~G~~v~L~C~~~~~----~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 85 (252)
T 1oga_E 10 PKYLFRKEGQNVTLSCEQNLN----HDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQK 85 (252)
T ss_dssp CSEEEEETTCCEEECCEECSC----CSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCS
T ss_pred CCeEEEcCCCcEEEEEEeCCC----CCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCCh
Confidence 456789999999999998432 25799998753222111111 0123544432 2499999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.+.
T Consensus 86 ~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 86 NPTAFYLCASSSR 98 (252)
T ss_dssp CCCEEEEEEEESS
T ss_pred hhCEEEEEEEecC
Confidence 9999999998763
No 427
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=97.44 E-value=0.00028 Score=57.45 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=48.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....|.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~-~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (120)
T 1mfa_H 9 TVVARPGASVKMSCKASGYT-FTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSLT 87 (120)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEeCCCCEEEEEEeeCcc-ccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 46788999999999986321 1224699998754332221210 0 123554432 2 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (120)
T 1mfa_H 88 SEDSAVYYCTRGG 100 (120)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEec
Confidence 9999999999865
No 428
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=97.43 E-value=5.9e-05 Score=66.46 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=48.5
Q ss_pred eEEEEeCCeeeeeeeeccCCC--CCCCCeEEEEecccCceee------EeeccCcceEee-------cCceEEeeecCCC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPAS--MANQPMSWYHYSKDKGRYQ------IKFRSDKFIRTV-------DGGLVIMAVEELD 345 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~--La~~~v~W~~~~~~~~~~~------l~~~~~~~~~~~-------~~GLlI~~v~~~D 345 (378)
.+.+.+|+++.|.|.....+. ...+.|.|+.++....... ......+|+... ...|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456788999999999765532 2234789998764310000 001112333332 3449999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|.+.+
T Consensus 84 ~G~Y~C~~~~ 93 (222)
T 4i0k_A 84 EGSYTCFVSI 93 (222)
T ss_dssp CSCEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999985
No 429
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.42 E-value=0.00015 Score=63.73 Aligned_cols=80 Identities=9% Similarity=0.103 Sum_probs=48.4
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceE----EeeecCCCCeEEEEEeCC---
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLV----IMAVEELDAGKYDCWLGN--- 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLl----I~~v~~~DsG~Y~C~~~~--- 355 (378)
.+.+|+++.|.|...+.+. |.|+|+.++.. .+.......+....+|++ +..++..|+|.|.|.+.|
T Consensus 127 ~~~~g~~v~L~C~~~g~P~---p~i~W~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g 199 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPK---AEVIWTSSDHQ----VLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDP 199 (222)
T ss_dssp EETTTTEEEEEEEEEEBSC---CEEEEEETTCC----EECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTT
T ss_pred eecCCCcEEEEEEecCCCC---CeEEEEECCCc----eecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcc
Confidence 5667999999999876433 68999987332 121000001122334432 235678999999999987
Q ss_pred eeeEEEeeeecccc
Q psy10772 356 TVLCTHNLTVDAHS 369 (378)
Q Consensus 356 ~~l~~~~~~v~~~~ 369 (378)
..-++..|.|.+..
T Consensus 200 ~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 200 EENHTAELVIPELP 213 (222)
T ss_dssp TEEEEEEEECCCC-
T ss_pred ceeeEEEEEecCCc
Confidence 45567777776544
No 430
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.42 E-value=0.00031 Score=64.44 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=47.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccC----------c-ceEeec-----CceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD----------K-FIRTVD-----GGLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~----------~-~~~~~~-----~GLlI~~v~ 342 (378)
.+.+.+.+|+++.|.|....+ .+.|.|+.+........+....+ + |+.... .-|.|.+|+
T Consensus 34 p~~v~v~~G~~v~L~C~~~~~----~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 109 (270)
T 3qib_D 34 PRYLVKGQGQKAKMRCIPEKG----HPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSE 109 (270)
T ss_dssp CSEEEEETTSCEEEEEECCTT----CCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCC
T ss_pred CCeEEEcCCCCEEEEEEecCC----CceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCC
Confidence 455789999999999987542 34799987543222111110000 0 433321 139999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|.+.+
T Consensus 110 ~~D~G~Y~C~~~~ 122 (270)
T 3qib_D 110 AGDSALYLCASSL 122 (270)
T ss_dssp GGGCEEEEEEEES
T ss_pred HhHCeEEEEEEec
Confidence 9999999999974
No 431
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=97.42 E-value=0.0004 Score=58.57 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|- .. ..+|+.... + -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 87 (137)
T 1rjc_A 9 GGSVQAGQSLRLSCATSGA-TSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSLK 87 (137)
T ss_dssp CEEECTTCCEEEEEECC-C-TTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC--CEEEEEECSCC
T ss_pred CEEEecCCCEEEEEEecCC-cCCCcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 4678899999999998532 1223469999886433322121 10 123555442 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (137)
T 1rjc_A 88 PEDTAMYYCAADT 100 (137)
T ss_dssp GGGCEEEEEEECC
T ss_pred HHHCEEEEEEEEc
Confidence 9999999999875
No 432
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=97.42 E-value=0.00042 Score=57.16 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=48.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec----------cCcceEeec-----CceEEeeecC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR----------SDKFIRTVD-----GGLVIMAVEE 343 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~----------~~~~~~~~~-----~GLlI~~v~~ 343 (378)
.+.+.+.+|+++.|.|....... ..+.|+.+...++..-|-.. ..+|+.... --|.|.+++.
T Consensus 12 p~~~~v~~G~~vtL~C~~~~~~~---~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~~~~ 88 (125)
T 3r8b_B 12 PRNKVAVTGEKVTLSCKQTNSYF---NNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILELATP 88 (125)
T ss_dssp CSEEEEETTCCEEEEEEEESCCC---SEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETTCCG
T ss_pred CCeEEEcCCCcEEEEEEECCCCC---CeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECCCCh
Confidence 45678899999999999864322 36899987543332212110 123443321 1299999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|....
T Consensus 89 ~Dsg~Y~C~~~~ 100 (125)
T 3r8b_B 89 SQTSVYFCASGG 100 (125)
T ss_dssp GGCEEEEEEEEE
T ss_pred hhCEEEEEEEcC
Confidence 999999998753
No 433
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=97.42 E-value=0.00024 Score=58.61 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e----------------ccCcceEeec---C---ceE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F----------------RSDKFIRTVD---G---GLV 337 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~----------------~~~~~~~~~~---~---GLl 337 (378)
.+.+.+|+++.|.|...... .....|.|+.+...++...|- . ...+|+.... . -|.
T Consensus 9 ~~~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~ 87 (127)
T 1i3u_A 9 GGLVQAGDSLKLSCEASGDS-IGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRDNAKNTVNLQ 87 (127)
T ss_dssp CEECCTTCCEEEEEEEESSC-GGGSEEEEEEECTTSCCEEEEEEEEEESSSSCEEEEECTTTBTTEEEEEEGGGTEEEEE
T ss_pred CEEEeCCCcEEEEEEecCCC-cCCcEEEEEEECCCCCcEEEEEEEeccccCCCcceeeCcccCCeEEEEEcCCCCEEEEE
Confidence 46778899999999986321 112469999875433221121 0 0123555442 2 399
Q ss_pred EeeecCCCCeEEEEEeCC
Q psy10772 338 IMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 338 I~~v~~~DsG~Y~C~~~~ 355 (378)
|.+++.+|+|.|.|...+
T Consensus 88 I~~~~~~Dsg~Y~C~~~~ 105 (127)
T 1i3u_A 88 MNSLKPEDTAVYYCAAKT 105 (127)
T ss_dssp ECSCCGGGCEEEEEEEES
T ss_pred ECCCChhhCEEEEEEEEc
Confidence 999999999999999865
No 434
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=97.41 E-value=0.00034 Score=64.89 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=48.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e----------ccCcceEeecCc------eEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F----------RSDKFIRTVDGG------LVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~----------~~~~~~~~~~~G------LlI~~v~~ 343 (378)
.+++.+|+++.|.|...... .....|.|+.+...++...|. . ...+|+....++ |.|.+|+.
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFS-LSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CSEECTTSCEEEEEEEESSC-GGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEecccc-CCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 46788999999999986321 222479998875332211120 0 112454443222 99999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|...+
T Consensus 88 ~DsG~Y~C~~~~ 99 (263)
T 3iu4_H 88 DDTAMYYCARSG 99 (263)
T ss_dssp GGCEEEEEEEEE
T ss_pred HHCEEEEEEEEe
Confidence 999999999875
No 435
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.41 E-value=0.00011 Score=65.31 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=41.7
Q ss_pred EeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 285 TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 285 ~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
.+|+++.|.|.+ | .+.++|+.++.+ |. .. .....-|.|.+++.+|+|.|.|.+.+.
T Consensus 16 ~~G~~v~L~C~~--p----~~~i~W~k~g~~-----l~--~~---~~~~~~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 16 QEDGSVLLTCDA--E----AKNITWFKDGKM-----IG--FL---TEDKKKWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp CSSSEEEEEECS--C----SSEEEEEETTEE-----EE--EE---ESSCCCEEEEEGGGCCEEEEEEESSSS
T ss_pred cCCCeEEEEEcC--C----CCEEEEEECCEE-----CC--CC---CCCCCeEEeCCCCcCCCEEEEEEecCC
Confidence 479999999987 2 247999987653 43 11 012345999999999999999998763
No 436
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.41 E-value=0.00017 Score=64.78 Aligned_cols=61 Identities=20% Similarity=0.297 Sum_probs=46.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+.+. ...++|+.++.. |. . ...-|.|.+++..|+|.|.|.+.+
T Consensus 9 ~~~~v~~G~~v~l~C~~~~~~~--~~~~~W~~~g~~-----~~--~------~~~~l~i~~~~~~d~G~Y~C~~~~ 69 (262)
T 3rjd_A 9 PWVSVFQEETVTLHCEVLHLPG--SSSTQWFLNGTA-----TQ--T------STPSYRITSASVNDSGEYRCQRGL 69 (262)
T ss_dssp CCSEEETTCCEEEEEECSSCCC--TTCEEEEETTEE-----CS--C------CSSEEEESSCCGGGCEEEEEEESS
T ss_pred CcEEeeCCCeEEEEEECCCCCC--CceEEEEECCEE-----ee--c------cCCeEEEecCCcccCeEEEEEEec
Confidence 3457889999999999865433 127999987653 32 1 145688999999999999999987
No 437
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.41 E-value=0.00016 Score=66.21 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=51.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCc-eeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG-RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~-~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
..+.+|+++.|.|...+++. ++.+.|+.++.... ...... ...+ .....-|.|.+++.+|+|.|.|.+.| ..
T Consensus 196 ~~~~~g~~v~l~C~~~~~~~--~~~~~w~~~~~~~~~~~~~~~-~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 196 LVRIRGEAAQIVCSASSVDV--NFDVFLQHNNTKLAIPQQSDF-HNNR-YQKVLTLNLDQVDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp BCCCSSSCEEEEEEEEESSS--CCEEECCBSSCCCCCCBEEEE-ETTE-EEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred eeEecCCCEEEEEEecCCCC--ceEEEEeCCCcccccCcccee-ccce-eeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence 34568999999999975442 23456665544210 000000 0111 11233599999999999999999988 66
Q ss_pred eEEEeeeecccc
Q psy10772 358 LCTHNLTVDAHS 369 (378)
Q Consensus 358 l~~~~~~v~~~~ 369 (378)
-++..|+|.+..
T Consensus 272 ~~~~~l~V~~~~ 283 (292)
T 4dkd_C 272 STSMFFRVVESA 283 (292)
T ss_dssp EEEEEECC----
T ss_pred eeEEEEEEeeCC
Confidence 777888887653
No 438
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=97.41 E-value=0.00011 Score=68.99 Aligned_cols=65 Identities=15% Similarity=0.296 Sum_probs=39.2
Q ss_pred EEeCCeeeeeeeecc-CCCCCCCCeEEEEecccCceeeEeeccCcceEeecCc-------eEEeeecCCCCeEEEEEeCC
Q psy10772 284 VTWGQSVHLSCFVKL-PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG-------LVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~-~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~G-------LlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+|+++.|.|...+ ++. ...|+|+.++.+ |.......+....+| |.|..++..|+|.|.|.+.|
T Consensus 232 ~~~G~~v~l~C~~~g~~p~--~~~v~W~k~g~~-----l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N 304 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQ--RLQLTWLENGNV-----SRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEH 304 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSS--CEEEEEEETTEE-----EEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEE
T ss_pred cCCCCcEEEEEEEccccCC--CcEEEEEECCeE-----ccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEe
Confidence 568999999999976 322 116999998764 331111223334444 77888889999999999998
No 439
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.41 E-value=0.00014 Score=66.63 Aligned_cols=65 Identities=18% Similarity=0.350 Sum_probs=45.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
..+.+.+|+++.|.|...+ .|+|+.++.+... .+....+.. ...-|.|.+++.+|+|.|.|.+.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~-------~v~W~~~~~~~~~-~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n 72 (289)
T 3mjg_X 8 PELVLNVSSTFVLTCSGSA-------PVVWERMSQEPPQ-EMAKAQDGT---FSSVLTLTNLTGLDTGEYFCTHND 72 (289)
T ss_dssp SEEECCTTCCEEEEEEESS-------CCEEEBTTBCCSE-EEEECTTSC---EEEEEEECSCCGGGCEEEEEECCC
T ss_pred CeEEEeCCCcEEEEEeccc-------eEEEECCCCCccc-ceeccCCCc---eeEEEEEccCChhhCEEEEEEEcc
Confidence 4567888999999999742 2899998765211 011001110 123489999999999999999987
No 440
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=97.41 E-value=0.0002 Score=74.59 Aligned_cols=77 Identities=26% Similarity=0.310 Sum_probs=55.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceE-eecC---ceEEeeecCCCCeEEEEEeC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIR-TVDG---GLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~-~~~~---GLlI~~v~~~DsG~Y~C~~~ 354 (378)
.+...+.+|+++.|.|.+.+-+. |.|+|+.++++ |. .+.++. ..++ -|.|.++...|+|.|.|.+.
T Consensus 489 ~~~~~v~~G~~~~~~~~v~g~P~---P~v~W~k~~~e-----l~--~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~ 558 (573)
T 3uto_A 489 PYGTEVGEGQSANFYCRVIASSP---PVVTWHKDDRE-----LK--QSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAK 558 (573)
T ss_dssp CCCEEECTTSCEEEEEEEECSSC---CEEEEEETTEE-----CC--SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcEEeCCCcEEEEEEEEccCC---CeEEEEECCEE-----cc--cCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEE
Confidence 35567889999999999875544 79999988764 43 333332 2223 38999999999999999999
Q ss_pred C---eeeEEEeeee
Q psy10772 355 N---TVLCTHNLTV 365 (378)
Q Consensus 355 ~---~~l~~~~~~v 365 (378)
| ..-+.-+|+|
T Consensus 559 N~~G~~~~~v~l~V 572 (573)
T 3uto_A 559 NSYGTKEEIVFLNV 572 (573)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEE
Confidence 8 4444444443
No 441
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.40 E-value=0.00048 Score=68.67 Aligned_cols=94 Identities=12% Similarity=0.047 Sum_probs=59.3
Q ss_pred ccccccceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecC------
Q psy10772 273 CESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDG------ 334 (378)
Q Consensus 273 C~~~~~~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~------ 334 (378)
|+.......+.+.+|+++.|.|.....+ ...+.|.|+.+...++...|. . ...+|+....+
T Consensus 2 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (475)
T 1iga_A 2 VKLLEQSGAEVKKPGASVKVSCKASGYS-FTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTA 80 (475)
T ss_pred cceeccCCcEEEeCCCCEEEEEEecCCC-CCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeE
Confidence 4433345678899999999999986432 223479999874322211110 0 01235443321
Q ss_pred ceEEeeecCCCCeEEEEEeCCee---------eEEEeeeecc
Q psy10772 335 GLVIMAVEELDAGKYDCWLGNTV---------LCTHNLTVDA 367 (378)
Q Consensus 335 GLlI~~v~~~DsG~Y~C~~~~~~---------l~~~~~~v~~ 367 (378)
-|.|.+++.+|+|.|.|.+.+.. -....|+|..
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 122 (475)
T 1iga_A 81 YMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSS 122 (475)
T ss_pred EEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEecc
Confidence 39999999999999999998742 1234677764
No 442
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=97.40 E-value=0.00031 Score=56.92 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=47.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccC--ceeeE-eec-------c---CcceEeecC----ceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK--GRYQI-KFR-------S---DKFIRTVDG----GLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~--~~~~l-~~~-------~---~~~~~~~~~----GLlI~~v~ 342 (378)
+.+.+.+|+++.|.|...... ....+.|+.+...+ +..-| ... . .+|+..... -|.|.+++
T Consensus 8 ~~v~v~~G~~vtL~C~~~~~~--~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~~~~ 85 (114)
T 2hp4_A 8 LDRTWNLGETVELKCQVLLSN--PTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFR 85 (114)
T ss_dssp CSCCCCTTCCEEEEEEECCSS--CCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEESSCC
T ss_pred CEEEEcCCCCEEEEEEeecCC--CCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEECCCC
Confidence 345677899999999986332 12479999874322 12112 110 0 235433222 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 86 ~~Dsg~Y~C~~~~ 98 (114)
T 2hp4_A 86 RENEGYYFCSALS 98 (114)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEec
Confidence 9999999999875
No 443
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=97.39 E-value=0.00035 Score=62.56 Aligned_cols=77 Identities=16% Similarity=0.155 Sum_probs=49.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCC-CCCCCeEEEEecccCceeeEee-----------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPAS-MANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~-La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+. ...+.|.|+.+...++...|.. ...+|+.... ..|.|.+|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 3467889999999999864321 1014799988753222111110 0123544331 24999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 88 ~~~D~G~Y~C~~~~~ 102 (228)
T 3bae_H 88 DTADTATYYCARRGF 102 (228)
T ss_dssp CGGGCEEEEEEEEEE
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999864
No 444
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=97.38 E-value=0.00072 Score=60.95 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=48.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-----------ccCcceEeec---C---ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-----------RSDKFIRTVD---G---GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-----------~~~~~~~~~~---~---GLlI~~v~~ 343 (378)
.+.+.+|+++.|.|.....+ +..+.|.|+.+....+...|.. ...+|+.... . -|.|.+|+.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 9 AGLLKPSETLSLTCAVYGGS-FSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCEECTTSCEEEEEEEESSC-CSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEeCCCcEEEEEEEcccc-CCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 45788999999999986432 1235799998753222111110 0134554432 2 499999999
Q ss_pred CCCeEEEEEeC
Q psy10772 344 LDAGKYDCWLG 354 (378)
Q Consensus 344 ~DsG~Y~C~~~ 354 (378)
+|+|.|.|.+.
T Consensus 88 ~D~G~Y~C~~~ 98 (232)
T 1dn0_B 88 ADTAVYYCARP 98 (232)
T ss_dssp GGCEEEEEEEC
T ss_pred ccCEEEEEEEe
Confidence 99999999997
No 445
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.38 E-value=0.00033 Score=62.83 Aligned_cols=74 Identities=19% Similarity=0.218 Sum_probs=52.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---ee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---TV 357 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~~ 357 (378)
...+.+|+++.|.|..... .+.+.++|+.++.. +. . ......|.|.+++..|+|.|.|.+.+ ..
T Consensus 91 ~~~~~~g~~v~l~C~~~~~--~p~~~v~W~~~g~~-----~~--~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~ 157 (262)
T 3rjd_A 91 SRVFTEGEPLALRCHAWKD--KLVYNVLYYRNGKA-----FK--F----FHWNSNLTILKTNISHNGTYHCSGMGKHRYT 157 (262)
T ss_dssp CSEEETTSCEEEEEEEGGG--CCCEEEEEEETTEE-----EE--E----EEECCCEEESSCCGGGCEEEEEEEESSSEEE
T ss_pred CeEEecCCeEEEEEEccCC--CCCceEEEEECCcc-----cc--c----cCCCCeEEEEECChhhCEEEEEEEeCCCCcc
Confidence 3457789999999998322 22357999987653 43 1 12356799999999999999999987 33
Q ss_pred eEEEeeeecc
Q psy10772 358 LCTHNLTVDA 367 (378)
Q Consensus 358 l~~~~~~v~~ 367 (378)
-....|.|..
T Consensus 158 ~~~~~l~V~~ 167 (262)
T 3rjd_A 158 SAGISVTVKE 167 (262)
T ss_dssp EECEEEEEEC
T ss_pred ccceEEEecc
Confidence 4445666654
No 446
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.38 E-value=0.0004 Score=64.46 Aligned_cols=87 Identities=15% Similarity=0.209 Sum_probs=52.6
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEee-c---CceEEeeecCCCCe
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-D---GGLVIMAVEELDAG 347 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~---~GLlI~~v~~~DsG 347 (378)
.+.+.+.+|+++.|.|.....+ +.|.|+.+........+.. ..++|+... . .-|.|.+++.+|+|
T Consensus 169 p~~~~v~~G~~v~L~C~~~~~~----~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 244 (282)
T 1qok_A 169 PAIMSASPGEKVTITCSASSSV----SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAA 244 (282)
T ss_dssp CSEEEECTTCCEEEEEEESSCC----SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCEEEEcCCCcEEEEEEecCCC----ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCE
Confidence 3456788999999999986554 3799998532211101110 012343322 1 13999999999999
Q ss_pred EEEEEeCCeee----EEEeeeecccc
Q psy10772 348 KYDCWLGNTVL----CTHNLTVDAHS 369 (378)
Q Consensus 348 ~Y~C~~~~~~l----~~~~~~v~~~~ 369 (378)
.|.|.+.+..- ..-.|+|....
T Consensus 245 ~Y~C~a~~~~~~~fg~gt~l~V~~~~ 270 (282)
T 1qok_A 245 TYYCQQRSSYPLTFGAGTKLELKRAA 270 (282)
T ss_dssp EEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEEeeCCCceEeCCEEEEEeccc
Confidence 99999986321 23356665443
No 447
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=97.38 E-value=0.00028 Score=58.23 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=47.8
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCC-CCeEEEEecccCceeeEee-c----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMAN-QPMSWYHYSKDKGRYQIKF-R----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~-~~v~W~~~~~~~~~~~l~~-~----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|.....+. .. ..|.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~s~~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~ 87 (127)
T 3cx5_J 9 AGLVQPSQSLSLTCSVTGYSI-TSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSVT 87 (127)
T ss_dssp CSEECTTSCEEEEEEEESSCT-TTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEECSCC
T ss_pred CEEEcCCCCEEEEEEEeCccc-CCCcEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 356888999999999863321 11 3699998754332221211 0 123444332 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (127)
T 3cx5_J 88 TEDTATYYCARSE 100 (127)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999875
No 448
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.37 E-value=0.00028 Score=67.40 Aligned_cols=87 Identities=16% Similarity=0.076 Sum_probs=54.1
Q ss_pred eeEEEEeCCeeeeeeeeccC-CC-CCCCCeEEEEecccCceeeEeec-cCcceEe------------e--cCceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLP-AS-MANQPMSWYHYSKDKGRYQIKFR-SDKFIRT------------V--DGGLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~-~~-La~~~v~W~~~~~~~~~~~l~~~-~~~~~~~------------~--~~GLlI~~v~ 342 (378)
+.+.+.+|+++.|.|...+. +. -|.|.++|+.++.+.....+... .+.++.. . ..-|.|.+++
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 263 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQAL 263 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCC
Confidence 56778899999999976541 11 12357999988754111001100 1222222 1 2259999999
Q ss_pred CCCCeEEEEEeCCe-----eeEEEeeeec
Q psy10772 343 ELDAGKYDCWLGNT-----VLCTHNLTVD 366 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~-----~l~~~~~~v~ 366 (378)
..|+|.|.|.+.|. .-....|.|.
T Consensus 264 ~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 264 PQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp GGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred cCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 99999999999654 4455555554
No 449
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.37 E-value=0.00046 Score=58.12 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=49.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 87 (136)
T 1zvy_A 9 GGSVQAGGSLRLSCAASGS-TDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSVK 87 (136)
T ss_dssp CEECCTTCCEEEEEEEESC-STTCCEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEeCCCCEEEEEEecCC-CCCCcEEEEEEECCCCCCEEEEEEeCCCCceeeCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 4677889999999998532 22224699998864333222211 0 124555432 2 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (136)
T 1zvy_A 88 SEDTAIYTCGATR 100 (136)
T ss_dssp GGGCEEEEEEECS
T ss_pred hhHCEEEEEEEEe
Confidence 9999999999875
No 450
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=97.37 E-value=0.00032 Score=57.30 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=48.1
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......|.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 9 ~~~~~~G~~vtL~C~~~~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (122)
T 1xiw_D 9 PELVKPGASMKISCKASGY-SFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSLT 87 (122)
T ss_dssp CEEECTTCCEEEEEEEESS-CGGGEEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CEEEeCCCcEEEEEEeeCc-ccCCCEEEEEEECCCCCcEEEEEEeccCCceeeCcccCCcEEEEEecCCCEEEEEECCCC
Confidence 3578899999999998632 1112368999875433222121 11 123554432 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (122)
T 1xiw_D 88 SEDSAVYYCARSG 100 (122)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEec
Confidence 9999999998763
No 451
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.37 E-value=0.00051 Score=62.93 Aligned_cols=77 Identities=22% Similarity=0.337 Sum_probs=48.0
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCC--CCCeEEEEecccCceeeEee-------ccCcceEeec----CceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMA--NQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD----GGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La--~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~----~GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|...+.+... .+.|.|+.+........|.. ...+|+.... .-|.|.+++.+|
T Consensus 128 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 207 (256)
T 1nqb_A 128 PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAED 207 (256)
T ss_dssp CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHH
Confidence 3456788999999999986543310 03799998532211100100 0123333221 129999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|.+.+
T Consensus 208 sG~Y~C~a~~ 217 (256)
T 1nqb_A 208 LGVYYCFQGS 217 (256)
T ss_dssp CEEEEEEECS
T ss_pred CEEEEEEEcc
Confidence 9999999987
No 452
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence, photoprotein, luminescent protein/immune system complex; HET: GYS; 2.15A {Lama pacos} SCOP: b.1.1.1 PDB: 3miq_E* 3ogo_E*
Probab=97.36 E-value=0.00058 Score=56.45 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=48.6
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeecC------ceEEeeecC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVDG------GLVIMAVEE 343 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~~------GLlI~~v~~ 343 (378)
+.+.+|+++.|.|..... ......+.|+.+...++...|-. . ..+|+....+ -|.|.+++.
T Consensus 12 ~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 90 (123)
T 3k1k_C 12 ALVQPGGSLRLSCAASGF-PVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVYLQMNSLKP 90 (123)
T ss_dssp CEECTTCCEEEEEEEESS-CTTTSCEEEEEECSSSCCEEEEEECSSSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEECCCCCEEEEEEeeCC-cccccEEEEEEECCCCCCEEEEEEEcCCCceeeCccccccEEEEEeCCCCEEEEEECCCCh
Confidence 578899999999998643 22224689998754333222211 0 1235554322 299999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|....
T Consensus 91 ~Dsg~Y~Ca~~~ 102 (123)
T 3k1k_C 91 EDTAVYYCNVNV 102 (123)
T ss_dssp GGCEEEEEEEES
T ss_pred hhCEEEEEEEec
Confidence 999999999864
No 453
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.35 E-value=0.00028 Score=64.79 Aligned_cols=78 Identities=17% Similarity=0.122 Sum_probs=54.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEE-ecccCceeeEeeccCcceE-eecCceEEeeecCCCCe-EEEEEeCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH-YSKDKGRYQIKFRSDKFIR-TVDGGLVIMAVEELDAG-KYDCWLGN 355 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~-~~~~~~~~~l~~~~~~~~~-~~~~GLlI~~v~~~DsG-~Y~C~~~~ 355 (378)
...+.+.+|+++.|.|....|. .+.++|+. ++.. |. .+.++. ....+|.|.+++.+|+| .|.|.+.|
T Consensus 98 ~~~~~~~~g~~v~l~C~~~~p~---~~~v~W~~~~g~~-----l~--~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n 167 (290)
T 2o26_X 98 GLPLFGKEDSDALVRCPLTDPQ---VSQYSLIECDGKS-----LP--TDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQR 167 (290)
T ss_dssp CCCEEEETTSCEEECCCBSCCS---CEEEEEEETTSCC-----CC--TTCEEEEETTTEEEEESCCGGGTTCEEEEEEEE
T ss_pred ccceEEecCCeEEEeCcCCCCC---CceEEEEeCCCcC-----CC--CCCceeeCCCCCEEEecccHHHCCCEEEEEEEE
Confidence 3457788999999999987543 14799954 4443 32 333333 33568999999999999 99999987
Q ss_pred e--eeE--EEeeeec
Q psy10772 356 T--VLC--THNLTVD 366 (378)
Q Consensus 356 ~--~l~--~~~~~v~ 366 (378)
. ... ...|.|.
T Consensus 168 ~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 168 DGTWLHSDKFTLKVR 182 (290)
T ss_dssp TTEEEECCCEEEEEE
T ss_pred CCceEEeEEEEEEEE
Confidence 2 222 2566665
No 454
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=97.34 E-value=0.00081 Score=62.31 Aligned_cols=75 Identities=20% Similarity=0.205 Sum_probs=49.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~------GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...+.+ +..+.|.|+.+...++..-|. . ...+|+....+ -|.|.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 9 GGLVKPGGSLRLSCAASGFT-FSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CEEECTTCEEEEEEEEESSC-GGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CEEEcCCCcEEEEEEecccc-CCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 45788999999999986432 112479999875322211110 0 11345544321 39999999
Q ss_pred CCCCeEEEEEeCCe
Q psy10772 343 ELDAGKYDCWLGNT 356 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~ 356 (378)
.+|+|.|.|.+.+.
T Consensus 88 ~~DsG~Y~C~~~~~ 101 (257)
T 3bn9_D 88 AEDTAVYYCARPYL 101 (257)
T ss_dssp GGGCEEEEEEEECC
T ss_pred hhhCEEEEEEEecC
Confidence 99999999999864
No 455
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=97.34 E-value=0.001 Score=68.56 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=53.8
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEee--cCceEEeeecCCCCeEEEEEeCCe---
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV--DGGLVIMAVEELDAGKYDCWLGNT--- 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~--~~GLlI~~v~~~DsG~Y~C~~~~~--- 356 (378)
..+..|+++.|.|....| .+.++|+.++.+ |. .+.++... ...|.|.+++..|+|.|.|.+.+.
T Consensus 121 ~~v~~g~~v~l~C~~~~p----~~~v~W~~~g~~-----l~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 189 (642)
T 1e07_A 121 KPVEDKDAVAFTCEPETQ----DATYLWWVNNQS-----LP--VSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSA 189 (642)
T ss_pred eeEecCCcEEEEEECCCC----CeeEEEEECCeE-----CC--CCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCC
Confidence 456789999999998763 358999988754 32 33343332 346999999999999999999873
Q ss_pred -eeEEEeeeecc
Q psy10772 357 -VLCTHNLTVDA 367 (378)
Q Consensus 357 -~l~~~~~~v~~ 367 (378)
.-....|+|..
T Consensus 190 ~~s~~~~l~V~~ 201 (642)
T 1e07_A 190 RRSDSVILNVLY 201 (642)
T ss_pred cccceEEEEEEe
Confidence 22446666663
No 456
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.34 E-value=0.00092 Score=67.08 Aligned_cols=85 Identities=19% Similarity=0.286 Sum_probs=57.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCC-eEEEEecccC--ce-eeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQP-MSWYHYSKDK--GR-YQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~-v~W~~~~~~~--~~-~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
....+.+|+++.|.|...+.+. |. ++|+.++... .. ..... .+++......-|.|.+++..|+|.|.|.+.|
T Consensus 219 ~~~~v~~G~~v~L~C~~~g~p~---p~~i~W~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 294 (524)
T 2ec8_A 219 ASYLLREGEEFTVTCTIKDVSS---SVYSTWKRENSQTKLQEKYNSWH-HGDFNYERQATLTISSARVNDSGVFMCYANN 294 (524)
T ss_dssp SEEEEETTSCEEEEEEEEESST---TCEEEEEETTCSCCCCEEEEEEE-CSSSCEEEEEEEEESSCCTTTCEEEEEEEEC
T ss_pred CcceEEcCCcEEEEEEEecCCC---cEEEEEEeCCCCCcccccccccc-ccCCccceEEEEEECCCCHHHCEEEEEEEEe
Confidence 4457899999999999975433 45 9999987651 10 00111 1111233345699999999999999999987
Q ss_pred ---eeeEEEeeeeccc
Q psy10772 356 ---TVLCTHNLTVDAH 368 (378)
Q Consensus 356 ---~~l~~~~~~v~~~ 368 (378)
....+..|.|...
T Consensus 295 ~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 295 TFGSANVTTTLEVVDK 310 (524)
T ss_dssp SSCEEEEEEEEEEESS
T ss_pred cCCceEEEEEEEEecc
Confidence 4455777777643
No 457
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.34 E-value=0.00037 Score=65.09 Aligned_cols=90 Identities=21% Similarity=0.231 Sum_probs=56.5
Q ss_pred ceeEEEEeCCeeeeeeeeccCC-CCCCCCeEEEEecccCce----------eeEeeccCcceEee-----cCceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPA-SMANQPMSWYHYSKDKGR----------YQIKFRSDKFIRTV-----DGGLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~-~La~~~v~W~~~~~~~~~----------~~l~~~~~~~~~~~-----~~GLlI~~v~ 342 (378)
...+.+.+|+++.|.|....+. ..+.+.++|+.++..... ..+.....+|+... +.-|.|.+++
T Consensus 21 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 100 (331)
T 3u83_A 21 NDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLE 100 (331)
T ss_dssp CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCC
T ss_pred CCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccC
Confidence 4568899999999999976541 112236999996532100 00110122343332 3449999999
Q ss_pred CCCCeEEEEE-eC---CeeeEEEeeeeccc
Q psy10772 343 ELDAGKYDCW-LG---NTVLCTHNLTVDAH 368 (378)
Q Consensus 343 ~~DsG~Y~C~-~~---~~~l~~~~~~v~~~ 368 (378)
.+|+|.|.|. +. ...-....|.|...
T Consensus 101 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 130 (331)
T 3u83_A 101 LEDEGVYICEFATFPTGNRESQLNLTVMAK 130 (331)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred cccCcEEEEEEEecCCCccEEEEEEEEecC
Confidence 9999999998 42 24556667777653
No 458
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=97.33 E-value=0.00053 Score=56.19 Aligned_cols=74 Identities=22% Similarity=0.201 Sum_probs=48.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e---c----------cCcceEeec---C---ceEEee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F---R----------SDKFIRTVD---G---GLVIMA 340 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~---~----------~~~~~~~~~---~---GLlI~~ 340 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|- . . ..+|+.... . -|.|.+
T Consensus 9 ~~~~~~G~~vtL~C~~~~~-~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~ 87 (124)
T 1dlf_H 9 GGLVQPGGSMKLSCATSGF-TFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNT 87 (124)
T ss_dssp CCEECTTCCEEEEEEEESS-CTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CEEEcCCCCEEEEeECCCc-cCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcCCCCEEEEEECC
Confidence 4578899999999998532 1223479998875433222121 1 0 123554432 2 299999
Q ss_pred ecCCCCeEEEEEeCC
Q psy10772 341 VEELDAGKYDCWLGN 355 (378)
Q Consensus 341 v~~~DsG~Y~C~~~~ 355 (378)
++.+|+|.|.|...+
T Consensus 88 ~~~~Dsg~Y~C~~~~ 102 (124)
T 1dlf_H 88 LRAEDTGIYYCTGIY 102 (124)
T ss_dssp CCGGGCEEEEEEEEB
T ss_pred CCHHHCEEEEEEEEe
Confidence 999999999999764
No 459
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=97.32 E-value=0.00043 Score=64.58 Aligned_cols=75 Identities=17% Similarity=0.381 Sum_probs=46.8
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCC--CCeEEEEecccCceee------EeeccCcceEe---------ecCceEEeeec
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMAN--QPMSWYHYSKDKGRYQ------IKFRSDKFIRT---------VDGGLVIMAVE 342 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~--~~v~W~~~~~~~~~~~------l~~~~~~~~~~---------~~~GLlI~~v~ 342 (378)
..+.+..|+++.|+|....++.... ..|+|+.++....... .......++.. .+..|.|.+++
T Consensus 8 ~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 87 (313)
T 4fqp_A 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87 (313)
T ss_dssp SEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCC
T ss_pred CEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCC
Confidence 4567788999999999876544211 1389998765321100 01112222221 12239999999
Q ss_pred CCCCeEEEEEeC
Q psy10772 343 ELDAGKYDCWLG 354 (378)
Q Consensus 343 ~~DsG~Y~C~~~ 354 (378)
.+|+|.|.|.+.
T Consensus 88 ~~D~G~Y~C~v~ 99 (313)
T 4fqp_A 88 VEDEGNYTCLFV 99 (313)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCEEEEEEEe
Confidence 999999999874
No 460
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.32 E-value=0.00026 Score=61.52 Aligned_cols=62 Identities=8% Similarity=0.168 Sum_probs=41.4
Q ss_pred EeCCeeeeeeeec-cCCCCCCCCeEEEEecccCceeeEeeccCcceEee-cCce----EEeeecCCCCeEEEEEeCC
Q psy10772 285 TWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV-DGGL----VIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 285 ~~G~s~~L~C~~r-~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~-~~GL----lI~~v~~~DsG~Y~C~~~~ 355 (378)
..|+.+.|.|... +.+. |.|+|+.++.+ |.. .+.++... ++|| .+..++..|+|.|.|.+.|
T Consensus 119 ~~g~~~~l~C~~~~g~P~---p~i~W~k~g~~-----l~~-~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n 186 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPE---PHLSWLENGEE-----LNA-INTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKY 186 (201)
T ss_dssp SSTTEEEEEEEEEEESSC---EEEEEEESSCE-----ECC-SEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEE
T ss_pred CCCCeEEEEEecCCccCC---CEEEEEECCEE-----Ccc-ccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEec
Confidence 3488999999984 4433 58999998654 431 11222333 2366 3456778999999999987
No 461
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=97.31 E-value=0.0005 Score=61.65 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=48.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCe--EEEEecccCceeeEe-e--c-----------cCcceEeecCc------eEE
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPM--SWYHYSKDKGRYQIK-F--R-----------SDKFIRTVDGG------LVI 338 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v--~W~~~~~~~~~~~l~-~--~-----------~~~~~~~~~~G------LlI 338 (378)
.+.+.+|+++.|.|..... ......+ .|+.+...++...+. . . ..+|+....++ |.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~-~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSFSGF-SLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CSEECTTSCEEEEEEEESC-GGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CEEECCCCcEEEEEEEeCc-ccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 3568889999999998532 1112356 998875432221110 0 0 11355544333 999
Q ss_pred eeecCCCCeEEEEEeCCe
Q psy10772 339 MAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 339 ~~v~~~DsG~Y~C~~~~~ 356 (378)
.+|+.+|+|.|.|.+.+.
T Consensus 88 ~~v~~~DsG~Y~C~~~~~ 105 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLR 105 (232)
T ss_dssp CSCCGGGCEEEEEEEECC
T ss_pred CcCChhhCEEEEEEEeec
Confidence 999999999999999754
No 462
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.31 E-value=0.00014 Score=68.04 Aligned_cols=62 Identities=19% Similarity=0.226 Sum_probs=45.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+|+++.|.|...+. .+.+.|+.++.. +. ...........|.|.+++.+|+|.|.|.+.
T Consensus 33 ~~v~~G~~v~L~C~~~~~----~~~~~W~k~g~~-----~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 94 (316)
T 3vh8_G 33 AVVPRGGHVTLRCHYRHR----FNNFMLYKEDRI-----HI--PIFHGRIFQESFNMSPVTTAHAGNYTCRGS 94 (316)
T ss_dssp SEEETTSCEEEEEEBTTB----CCSEEEEESSCS-----SS--CHHHHCCBSSCEEECSCCGGGCEEEEEEEB
T ss_pred CccCCCCCEEEEEEccCC----CceEEEEeCCCc-----cc--eeecCCcceEEEEECCCCcccCeEEEEEEE
Confidence 357789999999998655 247999988764 21 111111234569999999999999999875
No 463
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=97.31 E-value=0.00063 Score=55.07 Aligned_cols=74 Identities=20% Similarity=0.174 Sum_probs=48.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--c----------cCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--R----------SDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--~----------~~~~~~~~~~------GLlI~~v~ 342 (378)
.+++.+|+++.|.|..... ......+.|+.+...++...|-. . ..+|+....+ -|.|.+++
T Consensus 7 ~~~v~~G~~vtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 85 (115)
T 3k74_B 7 GGLVQPGGSLRLSCAASGF-TFNNYWMYWVRRAPGKGLEWVSMINPGGIITKYAESVKGRFTISRDNAKNTLYLQMNSLT 85 (115)
T ss_dssp CCEECTTCCEEEEEEECSS-CGGGSCEEEEEECTTCCEEEEEEECTTSCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEECCCCcEEEEEEEeCc-cccCCEEEEEEECCCCCeEEEEEEECCCCceeecccccccEEEEEcCCCCEEEEEECCCC
Confidence 4568889999999998643 11123689998754333222211 0 1235544321 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|....
T Consensus 86 ~~Dsg~Y~C~~~~ 98 (115)
T 3k74_B 86 SEDTAVYYCAKDW 98 (115)
T ss_dssp GGGCEEEEEEEST
T ss_pred hHhCEEEEEEEEc
Confidence 9999999999874
No 464
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=97.31 E-value=0.0003 Score=72.59 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=52.5
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+.+|+++.|.|...+.+. |.++|+.++.+ |. . .+-|.|.+++.+|+|.|.|.+.| .
T Consensus 567 ~~~~v~~g~~~~l~C~~~g~p~---p~v~W~~~g~~-----i~--~-------~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 629 (642)
T 1e07_A 567 PDSSYLSGANLNLSCHSASNPS---PQYSWRINGIP-----QQ--H-------TQVLFIAKITPNNNGTYACFVSNLATG 629 (642)
T ss_pred CceeEEcCCcEEEEEEeccCCC---CeEEEEECCEE-----Cc--c-------CceEEECcccccCCeEEEEEEEecccC
Confidence 3467788999999999875544 58999988653 42 1 34689999999999999999997 4
Q ss_pred eeEEEeeeec
Q psy10772 357 VLCTHNLTVD 366 (378)
Q Consensus 357 ~l~~~~~~v~ 366 (378)
.-++-.|+|.
T Consensus 630 ~~~s~~l~V~ 639 (642)
T 1e07_A 630 RNNSIVKSIT 639 (642)
T ss_pred cceeEEEEEE
Confidence 4455555543
No 465
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=97.31 E-value=0.00067 Score=62.01 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=48.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecCc------eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDGG------LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~G------LlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....+.|+.+...++...+- . ...+|+....++ |.|.+|+
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFT-FTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred cEEEcCCCCEEEEEEeeccc-cCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 45788999999999986321 122479998875332211110 0 112355443333 9999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 111 ~~DsG~Y~C~~~~ 123 (256)
T 3sob_H 111 AEDTAVYYCARGS 123 (256)
T ss_dssp GGGCEEEEEEEES
T ss_pred cccCEEEEEEEec
Confidence 9999999999875
No 466
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=97.31 E-value=0.00034 Score=58.54 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=48.3
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....+.|+.+...++...|- .. ..+|+.... . -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 87 (134)
T 1zvh_A 9 GGSVQAGGSLRLSCAASGYI-ASINYLGWFRQAPGKEREGVAAVSPAGGTPYYADSVKGRFTVSLDNAENTVYLQMNSLK 87 (134)
T ss_dssp CEEECTTCCEEEEEEEEESG-GGEEEEEEEEECTTSCCEEEEEECTTTCCEEECTTTBTTBEEEEETTTTEEEEEECSCC
T ss_pred CEEEccCCCEEEEEEeCCCC-cCCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 46788999999999985321 112368999876433322121 11 123555442 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~DsG~Y~C~~~~ 100 (134)
T 1zvh_A 88 PEDTALYYCAAAR 100 (134)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEec
Confidence 9999999999864
No 467
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=97.30 E-value=0.0021 Score=68.21 Aligned_cols=84 Identities=24% Similarity=0.311 Sum_probs=58.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC---e
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN---T 356 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~---~ 356 (378)
..+.+..|+++.|.|...+.+ .|.++|+.++...... .....+.++.....-|.|.+++..|+|.|.|.+.| .
T Consensus 256 ~~~~v~~g~~v~L~C~~~g~p---~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 331 (816)
T 3dmk_A 256 DMKTYSGSSTMALLCPAQGYP---VPVFRWYKFIEGTTRK-QAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGG 331 (816)
T ss_dssp EEEEECTTSCEEECCCCBCSS---CCEEEEEEECTTSSCE-EECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred cceEEeCCCeEEEEEEeeecC---CCeEEEEeCCCCCccC-cceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCc
Confidence 467788999999999986543 3689999865432111 11123445555566799999999999999999986 3
Q ss_pred eeEEEeeeecc
Q psy10772 357 VLCTHNLTVDA 367 (378)
Q Consensus 357 ~l~~~~~~v~~ 367 (378)
.-....|+|..
T Consensus 332 ~~~~~~l~V~~ 342 (816)
T 3dmk_A 332 ESVETVLTVTA 342 (816)
T ss_dssp EEEEEEEEECE
T ss_pred eEEEEEEEEcC
Confidence 44555666653
No 468
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.30 E-value=0.00056 Score=66.57 Aligned_cols=75 Identities=19% Similarity=0.133 Sum_probs=49.1
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe------------eccCcceEeecC------ceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK------------FRSDKFIRTVDG------GLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~------------~~~~~~~~~~~~------GLlI~~v 341 (378)
..+.+.+|+++.|.|...+.+. +.+.|+|+.+...+....+. ....+|+....+ -|.|.++
T Consensus 226 ~~~~v~~G~~v~L~C~~~g~p~-~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 304 (438)
T 1qgc_4 226 GGGLVKPGGSLKLSCTASGFIF-NRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSL 304 (438)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CceEEecCCcEEEEEEEccccc-CCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCC
Confidence 4567889999999999875441 12579999873211110010 011234443321 5999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.|
T Consensus 305 ~~~D~G~Y~C~a~n 318 (438)
T 1qgc_4 305 RSADTAMYYCVRRE 318 (438)
T ss_dssp CGGGCCEEEEEECC
T ss_pred ChhhCEEEEEEEEc
Confidence 99999999999997
No 469
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=97.30 E-value=0.00052 Score=62.97 Aligned_cols=75 Identities=19% Similarity=0.193 Sum_probs=50.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecCc------eEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDGG------LVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~G------LlI~~v 341 (378)
..+++.+|+++.|.|..... ......|.|+.+...++...+. . ...+|+....++ |.|.+|
T Consensus 7 ~~v~v~~G~~v~L~C~~s~~-~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 7 GGGVVQPGSSLRLSCAASGF-DFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp CCEEECTTCCEEEEEEEESS-CGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCEEEeCCCCEEEEEEeccc-cCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 45788899999999998642 1222479998875433221120 0 112455544333 999999
Q ss_pred cCCCCeEEEEEeCC
Q psy10772 342 EELDAGKYDCWLGN 355 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~ 355 (378)
+.+|+|.|.|.+.+
T Consensus 86 ~~~DsG~Y~C~~~~ 99 (248)
T 3u2s_H 86 RVEDTATYFCVREA 99 (248)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEeC
Confidence 99999999999875
No 470
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=97.30 E-value=0.00068 Score=60.69 Aligned_cols=73 Identities=15% Similarity=0.222 Sum_probs=49.4
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec-----cCcceEeec---C---ceEEeeecCCCCe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR-----SDKFIRTVD---G---GLVIMAVEELDAG 347 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~-----~~~~~~~~~---~---GLlI~~v~~~DsG 347 (378)
+.+.+.+|+++.|.|....... ..+.|+.+...++...|- .. ..+|+.... . -|.|.+++.+|+|
T Consensus 7 ~~~~v~~G~~vtL~C~~s~~~~---~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Dsg 83 (200)
T 2nw2_A 7 TEMTATEGAIVQINCTYQTSGF---NGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDSA 83 (200)
T ss_dssp SEEEEETTCCEEEEEECCCSSC---CCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CeEEEccCCCEEEEEEECCCCC---ceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccCC
Confidence 4678899999999999754432 369999886433322221 11 034554431 1 4999999999999
Q ss_pred EEEEEeCC
Q psy10772 348 KYDCWLGN 355 (378)
Q Consensus 348 ~Y~C~~~~ 355 (378)
.|.|...+
T Consensus 84 ~Y~C~~~~ 91 (200)
T 2nw2_A 84 SYLCAVQA 91 (200)
T ss_dssp EEEEEEC-
T ss_pred cEEEEEEc
Confidence 99999864
No 471
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.29 E-value=0.0003 Score=60.96 Aligned_cols=96 Identities=15% Similarity=0.096 Sum_probs=58.8
Q ss_pred EEEEEEEeeeecCCCeEEEEEEECCCeeE-EE--EeceeeeeccCCCCCcccccccceeEEEEeCCeeeeeeeeccCCCC
Q psy10772 226 LVVDVVQYEVFGTTSEYIVYFAATTTLRT-VF--VKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASM 302 (378)
Q Consensus 226 IaVd~v~~~~~~~~~~ytV~flGT~~G~v-~~--V~~~~lqd~~~~~~~~C~~~~~~k~~~~~~G~s~~L~C~~r~~~~L 302 (378)
+.+..+...| .+.|++.. -...|.. .. +...+...+ .+......+.++.|.|...+.+.
T Consensus 63 L~I~~v~~~D---~G~Y~C~~-~n~~g~~~~~~~~~l~V~~~~-------------~~p~i~~~~~~v~L~C~~~g~p~- 124 (176)
T 1hng_A 63 LKIKNLTRDD---SGTYNVTV-YSTNGTRILNKALDLRILEMV-------------SKPMIYWECSNATLTCEVLEGTD- 124 (176)
T ss_dssp EEESSCCGGG---CEEEEEEE-EETTCCEEEEEEEEEEEECCC-------------CCCEEEEETTTTEEEEECSSCSS-
T ss_pred EEEccccccc---CEEEEEEE-EeCCCCEEEEEEEEEEEeCCC-------------CCCEEEecCCcEEEEEEecCCCC-
Confidence 5555555555 68899884 3455664 11 111121111 11122234566999998765544
Q ss_pred CCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 303 ANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 303 a~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
|.++|+.++.+ |. .+ ..+.|.+++..|+|.|.|.+.|
T Consensus 125 --p~i~W~~~g~~-----l~--~~-------~~~~i~~~~~~d~G~Y~C~a~N 161 (176)
T 1hng_A 125 --VELKLYQGKEH-----LR--SL-------RQKTMSYQWTNLRAPFKCKAVN 161 (176)
T ss_dssp --CEEEEEETTEE-----EE--EE-------SSSEEEEECSCCSSCEEEEEEE
T ss_pred --cEEEEEECCEE-----CC--CC-------CcEEEEEEEccCCeEEEEEEEe
Confidence 68999987653 43 22 2356668899999999999997
No 472
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=97.28 E-value=0.00087 Score=57.19 Aligned_cols=74 Identities=20% Similarity=0.269 Sum_probs=49.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+...++...|-. ...+|+.... + -|.|.+++
T Consensus 9 ~~~v~~G~svtL~C~~s~~-~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~ 87 (148)
T 1jtp_A 9 GGSVQAGGSLRLSCAASGY-TIGPYCMGWFRQAPGKEREGVAAINMGGGITYYADSVKGRFTISQDNAKNTVYLLMNSLE 87 (148)
T ss_dssp CEEEETTCCEEEEEEEESC-SSCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEECCTTSEEEEEECSCC
T ss_pred CEEEecCCCEEEEEEEeCc-cCCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcCC
Confidence 4678899999999998532 22234699998864333221210 0123555442 2 39999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (148)
T 1jtp_A 88 PEDTAIYYCAADS 100 (148)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hhHCEEEEEEEEc
Confidence 9999999999865
No 473
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.28 E-value=0.00064 Score=67.18 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=49.6
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~------GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...+.+ ...+.|.|+.+....+...+. . ....|+....+ -|.|.+|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (457)
T 1hzh_H 9 AEVKKPGASVKVSCQASGYR-FSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLR 87 (457)
T ss_dssp CEEECTTCCEEECEEEESSC-GGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred ceEEcCCCCEEEEEEecCcc-ccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCC
Confidence 46788999999999986442 123479999864322211110 0 11345544321 39999999
Q ss_pred CCCCeEEEEEeCCe
Q psy10772 343 ELDAGKYDCWLGNT 356 (378)
Q Consensus 343 ~~DsG~Y~C~~~~~ 356 (378)
.+|+|.|.|.+.+.
T Consensus 88 ~~D~G~Y~C~~~~~ 101 (457)
T 1hzh_H 88 SADTAVYYCARVGP 101 (457)
T ss_dssp GGGCEEEEEEECCC
T ss_pred cccCEEEEEEEecC
Confidence 99999999999875
No 474
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.28 E-value=0.00017 Score=66.30 Aligned_cols=64 Identities=14% Similarity=0.235 Sum_probs=45.2
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCe
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNT 356 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~ 356 (378)
..+.+|+++.|.|....+. +.+.|+.++.. +.. .........-|.|.+|+.+|+|.|.|.+.+.
T Consensus 111 ~~v~~G~~vtL~C~~~~~~----~~~~w~k~g~~-----~~~--~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~ 174 (242)
T 1p6f_A 111 PEVISGEKVTFYCRLDTAT----SMFLLLKEGRS-----SHV--QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYN 174 (242)
T ss_dssp SEEETTCEEEEEEECTTSC----SEEEEEECSSS-----CEE--EEEECSSEEEEEEEECCGGGCEEEEEEEEEE
T ss_pred CccCCCCcEEEEEecCCCC----CEEEEEECCCc-----cCc--cccCCCceEEEEeCCCccccCEEEEEEEECC
Confidence 3578899999999986442 37899988754 211 0001112345899999999999999999764
No 475
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.28 E-value=0.00041 Score=64.92 Aligned_cols=76 Identities=18% Similarity=0.220 Sum_probs=49.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+ ...+.|.|+.+...++...|.. ...+|+.... .-|.|.++
T Consensus 30 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 108 (291)
T 2gki_A 30 GPELVKPGASVKMSCKASGYT-FTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSL 108 (291)
T ss_dssp CCEEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSC
T ss_pred CcEEecCCCCEEEEEeccCCc-ccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcC
Confidence 357889999999999986432 1124799998753222111100 0123443332 13999999
Q ss_pred cCCCCeEEEEEeCCe
Q psy10772 342 EELDAGKYDCWLGNT 356 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~ 356 (378)
+.+|+|.|.|.+.+.
T Consensus 109 ~~~DsG~Y~C~~~~~ 123 (291)
T 2gki_A 109 TSEDSAVYYCARGAY 123 (291)
T ss_dssp CGGGCEEEEEEEECG
T ss_pred CHHHCEEEEEEEecc
Confidence 999999999999875
No 476
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=97.26 E-value=0.00092 Score=59.42 Aligned_cols=74 Identities=19% Similarity=0.098 Sum_probs=50.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec------CceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD------GGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~------~GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|....... ..|.|+.+...++...|-. ...+|+.... --|.|.+++.+|
T Consensus 8 p~~v~v~~G~~v~L~C~~s~~~~---~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~D 84 (194)
T 1lp9_E 8 EGLVTLTEGLPVMLNCTYQSTYS---PFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLSD 84 (194)
T ss_dssp CSEEEEETTSCEEECEEEECSSS---CCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGGG
T ss_pred CCEEEEecCCCEEEEEEeCCCCC---ceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCccc
Confidence 35678899999999999864432 4799998864333221211 1134554431 249999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|...+
T Consensus 85 sg~Y~C~~~~ 94 (194)
T 1lp9_E 85 SALYYCALFL 94 (194)
T ss_dssp CEEEEEEEEE
T ss_pred CeeEEEEEec
Confidence 9999999863
No 477
>3iy0_H FAB 14, heavy domain; cryoem, neutralizing antibody, parvovirus, canine, feline, FAB footprint, immune system; 12.50A {Mus musculus}
Probab=97.25 E-value=0.00063 Score=55.58 Aligned_cols=74 Identities=20% Similarity=0.209 Sum_probs=48.7
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecC------ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDG------GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~------GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...... .....+.|+.+...++...|- . ...+|+....+ -|.|.+++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~~-~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 87 (120)
T 3iy0_H 9 TELVAPGGGVKLSCGASGYT-FTNYDMNWVRQRPGAGLEWIGWIFPGDGSARGNEKFGGAAALAAAAAGGTAYMGLGGLS 87 (120)
T ss_dssp CEEECSSCCEEEEEEEESSC-GGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEecCCCCEEEEEEeECCC-ccCCeEEEEEECCCCCCEEEEEEeCCCCceecChhhcCcEEEEEecCCCEEEEEECCCC
Confidence 36788999999999986431 112368999875433322221 1 11235544321 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|....
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (120)
T 3iy0_H 88 SEDSGVYFCARRG 100 (120)
T ss_dssp GGGCEEEEEEEES
T ss_pred hHHCEEEEEEEEe
Confidence 9999999999853
No 478
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.25 E-value=0.00017 Score=63.19 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=48.4
Q ss_pred eCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--------ccCcceEeecCceEEeeecCCCCeEEEEEeCCee
Q psy10772 286 WGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--------RSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTV 357 (378)
Q Consensus 286 ~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--------~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~ 357 (378)
+|+++.|.|...+... +++.|+|+.++.+ |.. ..+.. .....-|.|.+++..|+|.|.|.+.|..
T Consensus 128 ~g~~v~l~C~~~g~~p-~~~~v~W~k~g~~-----l~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 200 (213)
T 3mj8_L 128 KTNQATLVCMINGFYP-ADVAVTWEADGTP-----ITQGVKTTQPSKSDSK-YMATSYLTMTADAWKSRNTFICKVTHGG 200 (213)
T ss_dssp TTTEEEEEEEEEEEBS-SCCEEEEEETTEE-----ECTTEEECCCEEETTE-EEEEEEEEEESHHHHSCSCEEEEEEETT
T ss_pred cCCcEEEEEEeeceeC-CCeEEEEEcCCcc-----cCCCcccCCcCccCCc-EEEEEEEEEeHHHcCCCCEEEEEEEECC
Confidence 6999999999875211 1137999998754 310 01111 1222348899999999999999999743
Q ss_pred eEEEeeeeccccc
Q psy10772 358 LCTHNLTVDAHSN 370 (378)
Q Consensus 358 l~~~~~~v~~~~c 370 (378)
.....+|..-+|
T Consensus 201 -~~~~~~~~~s~c 212 (213)
T 3mj8_L 201 -NTVEKSLSPSAC 212 (213)
T ss_dssp -EEEEEEECC---
T ss_pred -ccEEeeeccccC
Confidence 444555555555
No 479
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=97.23 E-value=0.00067 Score=61.29 Aligned_cols=74 Identities=18% Similarity=0.310 Sum_probs=50.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee--c-----cCcceEeec------CceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF--R-----SDKFIRTVD------GGLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~--~-----~~~~~~~~~------~GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|....... +.+.|+.+...++...|-. . ..+|+.... --|.|.+++.+|
T Consensus 10 p~~~~v~~G~svtL~C~~s~~~~---~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~D 86 (210)
T 2eys_A 10 PQSLIILEGKNCTLQCNYTVSPF---SNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLSD 86 (210)
T ss_dssp CSEEEEETTCCEEEEEEECCSSC---CEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGG
T ss_pred CCEEEEecCCCEEEEEEECCCCC---CeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCccc
Confidence 35678999999999999864432 3699998764333221211 1 134554432 149999999999
Q ss_pred CeEEEEEeCC
Q psy10772 346 AGKYDCWLGN 355 (378)
Q Consensus 346 sG~Y~C~~~~ 355 (378)
+|.|.|...+
T Consensus 87 sg~Y~C~~~~ 96 (210)
T 2eys_A 87 SASYICVVSD 96 (210)
T ss_dssp CEEEEEEEES
T ss_pred CceEEEEEEc
Confidence 9999999865
No 480
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.22 E-value=0.00039 Score=60.93 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=42.0
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEe----ecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT----VDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~----~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|....+ .+.+.|+.++..... ...+... ...-|.|.+|+ |+|.|.|.+.+
T Consensus 118 ~v~~G~~v~L~C~~~~~----~~~~~w~k~g~~~~~------~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~ 182 (201)
T 1nkr_A 118 TVLAGENVTLSCSSRSS----YDMYHLSREGEAHER------RLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSF 182 (201)
T ss_dssp EECTTCEEEEEEEESSC----CSEEEEEETTCSSCE------EEECEEEETTEEEEEEEEEECC--SCEEEEEEEEE
T ss_pred ccCCCCeEEEEEeCCCC----CceEEEEECCcccCc------ccccccccCCceEEEEEeCCcC--CCeeEEEEEEc
Confidence 57889999999998643 247899988754211 0001111 13348899998 99999999874
No 481
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=97.22 E-value=0.00081 Score=54.88 Aligned_cols=76 Identities=20% Similarity=0.291 Sum_probs=50.1
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEE-EecccCceeeEeeccCcceE---eecC----ceEEeeecCCCCeEEEEEe
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIR---TVDG----GLVIMAVEELDAGKYDCWL 353 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~-~~~~~~~~~~l~~~~~~~~~---~~~~----GLlI~~v~~~DsG~Y~C~~ 353 (378)
.++..|+++.|+|.++.-.. +|+|+|. +++....+ |. .+.. -.++ =|-|.+|-.+|+|.|.|.+
T Consensus 21 hsv~~G~~f~leCpv~yc~~--rP~VtWcKln~~~c~~--L~----~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsA 92 (120)
T 2aw2_A 21 HSILAGDPFELECPVKYCAN--RPHVTWCKLNGTTCVK--LE----DRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSA 92 (120)
T ss_dssp EEEETTSCEEEEEEEECSSS--CCEEEEEEECSSCEEE--CC----SSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEE
T ss_pred ceEecCCeEEEEccEEeccC--CCceEEEecCCceEEE--Cc----cccccceecCCeeEEEEEEeeeeEcCCcceEEEe
Confidence 46777999999999986322 4689995 44433211 31 2222 1122 3667788899999999999
Q ss_pred CC--eeeEEEeeee
Q psy10772 354 GN--TVLCTHNLTV 365 (378)
Q Consensus 354 ~~--~~l~~~~~~v 365 (378)
+. .++-|+.+++
T Consensus 93 n~~sg~ieSHsvtI 106 (120)
T 2aw2_A 93 NFQSNLIESHSTTL 106 (120)
T ss_dssp EETTEEEECCCEEE
T ss_pred eCCCCcEEeeEEEE
Confidence 86 6666666553
No 482
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.21 E-value=0.0008 Score=66.13 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=54.3
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEeec------CceEEeee
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTVD------GGLVIMAV 341 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~~------~GLlI~~v 341 (378)
..+.+.+|+++.|.|.....+ .+.+.|.|+.+........+.. ...+|+.... .-|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 8 GGGLVQPGGSLKLSCATSGFT-FSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp CCCEECTTCCEEEEEEEESSC-GGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCeEEcCCCCEEEEEEcCCCc-cCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 346788999999999986432 1234799988743211110100 0123544432 14999999
Q ss_pred cCCCCeEEEEEeCCee-----e-EEEeeeecc
Q psy10772 342 EELDAGKYDCWLGNTV-----L-CTHNLTVDA 367 (378)
Q Consensus 342 ~~~DsG~Y~C~~~~~~-----l-~~~~~~v~~ 367 (378)
+.+|+|.|.|.+.+.. . ....|+|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS 118 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECS
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecC
Confidence 9999999999998742 1 224566664
No 483
>3k81_A Single strand antibody VHH domain; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Lama glama}
Probab=97.18 E-value=0.0011 Score=55.36 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=48.5
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec----------cCcceEeecC------ceEEeeecC
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR----------SDKFIRTVDG------GLVIMAVEE 343 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~----------~~~~~~~~~~------GLlI~~v~~ 343 (378)
.+++.+|+++.|.|..... ......+.|+.+...++...|- .. ..+|+....+ -|.|.+++.
T Consensus 9 ~v~v~~G~~VtL~C~~s~~-~~~~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~ 87 (127)
T 3k81_A 9 GGLAQAGGSLRLSCVVSGI-TFASEAWGWYRRAPGKQRELIAAINNEGRTNYVDSVKGRFTVSRDNAKNVMYLQMNSLKP 87 (127)
T ss_dssp CCBCCBTCEEEEEEBCSCC-CCSSSCEEEEEECSSSCEEEEEEECSSCCEEECTTTTTTCEEEEETTTTEEEEEEESBCT
T ss_pred CEEEccCCCEEEEEEecCC-CccCcEEEEEEECCCCCCEEEEEEECCCceEcCCcccCCEEEEEcCCCCEEEEEECCCCh
Confidence 4567889999999998543 2222368999875433332221 10 1235544321 299999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|....
T Consensus 88 ~Dsg~Y~Ca~~~ 99 (127)
T 3k81_A 88 EDTAVYYCNANL 99 (127)
T ss_dssp TTCEEEEEECCC
T ss_pred hhCEEEEEEEee
Confidence 999999999864
No 484
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.17 E-value=0.00056 Score=63.55 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=44.4
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcce-EeecCceEEeeecCCCCeEEEEEeC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI-RTVDGGLVIMAVEELDAGKYDCWLG 354 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~-~~~~~GLlI~~v~~~DsG~Y~C~~~ 354 (378)
..+.+|+++.|.|....+ .+.+.|+.++.......+. ..+. .....-|.|.+++.+|+|.|.|.+.
T Consensus 16 ~~V~~G~~VtL~C~~~~~----~~~~~W~k~g~~~~~~~~~---~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 16 PLVKSEETVILQCWSDVR----FQHFLLHREGKFKDTLHLI---GEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp SEEESSCCEEEEEEESSC----CSEEEEEEESTTCEEEEEE---CBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CEecCCCCEEEEEecCCC----CcEEEEEECCCCCCcceee---eeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 467889999999998533 2478999887642110110 0000 1123448999999999999999985
No 485
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.16 E-value=0.00073 Score=65.72 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=54.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCC-CCCCeEEEEecccCceeeEee-------ccCcceEee-cC---ceEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASM-ANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTV-DG---GLVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~L-a~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~-~~---GLlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|.....+.. ..+.|+|+.+........+.. ....|+... .. -|.|.+++.+|+
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 87 (438)
T 1qgc_4 8 PASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDV 87 (438)
T ss_dssp CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCC
Confidence 356788999999999998654320 012699998742211100100 012343332 22 399999999999
Q ss_pred eEEEEEeCCee----eEEEeeeec
Q psy10772 347 GKYDCWLGNTV----LCTHNLTVD 366 (378)
Q Consensus 347 G~Y~C~~~~~~----l~~~~~~v~ 366 (378)
|.|.|.+.+.. -....|+|.
T Consensus 88 G~Y~C~a~n~~~~~~~~~~~l~V~ 111 (438)
T 1qgc_4 88 ATYYCQQSNEVPLTFGAGTKLDLK 111 (438)
T ss_dssp EEEEEEECSSTTCCBCCCEEEEEC
T ss_pred eeEEEEEecCCCccccCceeEEec
Confidence 99999999843 223455554
No 486
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.16 E-value=0.00074 Score=62.79 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=51.8
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeecC-c---eEEeeecCCCCeEEE
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVDG-G---LVIMAVEELDAGKYD 350 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~~-G---LlI~~v~~~DsG~Y~ 350 (378)
+.+.+|+++.|.|...... .+.+.+.|+.+........|.. ...+|+..... + |.|.+++.+|+|.|.
T Consensus 149 ~~v~~G~~v~L~C~~~~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 227 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNN-VGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYY 227 (280)
T ss_dssp EEECTTCCEEEEEECCCCC-CCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEE
T ss_pred EEEecCCCEEEEEEecCCC-CCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEE
Confidence 7889999999999986511 1225799987643211100000 01233333222 2 999999999999999
Q ss_pred EEeCCee------eEEEeeeecccccCCCC
Q psy10772 351 CWLGNTV------LCTHNLTVDAHSNVADA 374 (378)
Q Consensus 351 C~~~~~~------l~~~~~~v~~~~c~~~~ 374 (378)
|.+.+.. -..-.|+|....-.+|+
T Consensus 228 C~~~~~~~~~~~~g~~t~l~V~~~~~~~P~ 257 (280)
T 3fku_X 228 CSTWDSSLSAVVFGGGTKLTVLGQPKAAPS 257 (280)
T ss_dssp EEEEETTTTEEEEBCCCEEEEC--------
T ss_pred EEEecCCCCceEECCCEEEEECCCCCCCCc
Confidence 9996532 12235677655544444
No 487
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=97.15 E-value=0.00049 Score=65.80 Aligned_cols=67 Identities=25% Similarity=0.334 Sum_probs=50.9
Q ss_pred EEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcceEeecCceEEeeecCCCCeEEEEEeCCeeeEEEee
Q psy10772 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNL 363 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~GLlI~~v~~~DsG~Y~C~~~~~~l~~~~~ 363 (378)
+..|+++.|.|..+.+ +.|+|+.++... + ...++-|.|.+++..|+|.|.|++....++.-.|
T Consensus 18 ~~~G~~v~l~C~~~~~-----~~i~W~~~~~~~----~--------~~~~~~L~i~~~~~~d~G~YtC~~~~~~~~~~~l 80 (306)
T 3d85_D 18 DAPGEMVVLTCDTPEE-----DGITWTLDQSSE----V--------LGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLL 80 (306)
T ss_dssp SCCCEEEEEECSSSCC-----SSCEEEETTCCC----C--------CEESSEEEEEECSGGGCEEEEEEETTEEEEEEEE
T ss_pred CccCCcEEEECCCCCC-----CcCEEEECCccc----c--------CCCCCEEEEEecCcCCCceEEEeeCCcccceEEE
Confidence 3469999999998632 268999887531 1 1245569999999999999999997777777777
Q ss_pred eecc
Q psy10772 364 TVDA 367 (378)
Q Consensus 364 ~v~~ 367 (378)
.|+.
T Consensus 81 ~v~~ 84 (306)
T 3d85_D 81 LLHK 84 (306)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7764
No 488
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=97.15 E-value=0.00096 Score=54.71 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=47.4
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCe--EEEEecccCceeeEe-ec----------cCcceEeec---C---ceEEeee
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPM--SWYHYSKDKGRYQIK-FR----------SDKFIRTVD---G---GLVIMAV 341 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v--~W~~~~~~~~~~~l~-~~----------~~~~~~~~~---~---GLlI~~v 341 (378)
.+.+.+|+++.|.|..... ......+ .|+.+...++...|- .. ..+|+.... . -|.|.++
T Consensus 9 ~~~v~~G~~vtL~C~~s~~-~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 87 (122)
T 3nn8_A 9 PEDVKPGASVKISCKASGY-SLSTSGMGVNWVKQSPGKGLEWLAHIYWDDDKRYNPSLKSRATLTVDKTSSTVYLELRSL 87 (122)
T ss_dssp CEEECTTCCEEEEEEEESS-CTTSTTCEEEEEEEETTEEEEEEEEEETTCCEEECGGGTTCEEEEEETTTTEEEEEECSC
T ss_pred CeEEeCCCcEEEEEEEECC-CccCceEEeEEEEeCCCCCcEEEEEEEcCCCeecCccccCCEEEEEeCCCCEEEEEECCC
Confidence 4678899999999998642 2222357 998875432222121 10 123544432 1 2999999
Q ss_pred cCCCCeEEEEEeC
Q psy10772 342 EELDAGKYDCWLG 354 (378)
Q Consensus 342 ~~~DsG~Y~C~~~ 354 (378)
+.+|+|.|.|...
T Consensus 88 ~~~Dsg~Y~C~~~ 100 (122)
T 3nn8_A 88 TSEDSSVYYCARR 100 (122)
T ss_dssp CGGGCEEEEEEEE
T ss_pred ChhhCEEEEEEEE
Confidence 9999999999985
No 489
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.15 E-value=0.0006 Score=62.84 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=47.9
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee------------ccCcceEee------cCceEEeeecC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF------------RSDKFIRTV------DGGLVIMAVEE 343 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~------------~~~~~~~~~------~~GLlI~~v~~ 343 (378)
..+.+|+++.|.|.....+. +.+.|.|+.+...+....|.. ..++|+... ..-|.|.+++.
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~-~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 226 (264)
T 2gjj_A 148 EVVKTGASVKISCKASGYSF-TGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS 226 (264)
T ss_dssp EEECTTCCEEEEEEEESSCG-GGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEcCCCcEEEEEEEeCCcc-CCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc
Confidence 46889999999999864421 124799998753222111210 012343332 12499999999
Q ss_pred CCCeEEEEEeCCe
Q psy10772 344 LDAGKYDCWLGNT 356 (378)
Q Consensus 344 ~DsG~Y~C~~~~~ 356 (378)
+|+|.|.|.+.|.
T Consensus 227 ~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 227 EDSADYYCVRSGN 239 (264)
T ss_dssp GGCEEEEEEEECS
T ss_pred ccCEEEEEEEecC
Confidence 9999999999873
No 490
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.15 E-value=0.00091 Score=60.95 Aligned_cols=77 Identities=23% Similarity=0.261 Sum_probs=50.7
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-------ccCcceEeec---C---ceEEeeecCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-------RSDKFIRTVD---G---GLVIMAVEELD 345 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-------~~~~~~~~~~---~---GLlI~~v~~~D 345 (378)
.+.+.+.+|+++.|.|...+.+ +..+.|.|+.+...++..-|-. ...+|+.... . -|.|.+++.+|
T Consensus 8 p~~v~v~~G~~vtL~C~~s~~~-~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 86 (229)
T 1hxm_A 8 HQTVPVSIGVPATLRCSMKGEA-IGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERD 86 (229)
T ss_dssp CSEEEEETTCCEEEEEEECSSC-GGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGG
T ss_pred CCEEEEcCCCCEEEEeEecCCc-cCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhH
Confidence 3567899999999999986332 1123699998754322211211 0134554432 2 39999999999
Q ss_pred CeEEEEEeCCe
Q psy10772 346 AGKYDCWLGNT 356 (378)
Q Consensus 346 sG~Y~C~~~~~ 356 (378)
+|.|.|...+.
T Consensus 87 sg~Y~C~~~~~ 97 (229)
T 1hxm_A 87 EGSYYCACDTL 97 (229)
T ss_dssp CEEEEEEEECC
T ss_pred CeEEEEEEecC
Confidence 99999998754
No 491
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.15 E-value=0.00069 Score=62.17 Aligned_cols=75 Identities=21% Similarity=0.188 Sum_probs=48.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-------------ccCcceEeec------CceEEe
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-------------RSDKFIRTVD------GGLVIM 339 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-------------~~~~~~~~~~------~GLlI~ 339 (378)
..+.+.+|+++.|.|.....+. ..+.+.|+.+........|. . ..++|+.... .-|.|.
T Consensus 159 ~~~~v~~G~~v~L~C~~~~~~~-~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 237 (268)
T 1x9q_A 159 GGGLVQPGGAMKLSCVTSGFTF-GHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMN 237 (268)
T ss_dssp CCEEECTTCCEEEEEEEESSCG-GGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred CceEecCCCcEEEEEEecCccc-cccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEEC
Confidence 3567889999999999864321 12479999875322111110 0 1233444432 239999
Q ss_pred eecCCCCeEEEEEeCC
Q psy10772 340 AVEELDAGKYDCWLGN 355 (378)
Q Consensus 340 ~v~~~DsG~Y~C~~~~ 355 (378)
+++.+|+|.|.|.+.+
T Consensus 238 ~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 238 NLRVEDTGIYYCTGAS 253 (268)
T ss_dssp SCCGGGCEEEEEEEEE
T ss_pred CCCHHHCEEEEEEEcc
Confidence 9999999999999875
No 492
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=97.14 E-value=0.00089 Score=61.95 Aligned_cols=73 Identities=18% Similarity=0.304 Sum_probs=48.2
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-----------ccCcceEeecCc------eEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-----------RSDKFIRTVDGG------LVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-----------~~~~~~~~~~~G------LlI~~v~ 342 (378)
.+.+.+|+++.|.|..... ......+.|+.+....+...+. . ...+|+....++ |.|.+|+
T Consensus 32 ~~~~~~G~~v~L~C~~s~~-~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 32 AEVKKPGSSVKVSCKASGN-SFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CEEECTTCCEEEEEEEGGG-GGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CEEEeCCCcEEEEEEeeCC-ccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 4678899999999998542 1222478998875432221121 1 112455543333 9999999
Q ss_pred CCCCeEEEEEeC
Q psy10772 343 ELDAGKYDCWLG 354 (378)
Q Consensus 343 ~~DsG~Y~C~~~ 354 (378)
.+|+|.|.|...
T Consensus 111 ~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 111 ADDTAIYYCLTG 122 (267)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCEEEEEEEC
Confidence 999999999985
No 493
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=97.14 E-value=0.0015 Score=58.52 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=49.6
Q ss_pred eeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-ec----cCcceEeec---C---ceEEeeecCCCCeE
Q psy10772 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-FR----SDKFIRTVD---G---GLVIMAVEELDAGK 348 (378)
Q Consensus 280 k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~~----~~~~~~~~~---~---GLlI~~v~~~DsG~ 348 (378)
+.+.+.+|+++.|.|....... . ..+.|+.+...++...|- .. ..+|+.... . -|.|.+++.+|+|.
T Consensus 7 ~~~~v~~G~~v~L~C~~s~~~~-~-~~v~Wyrq~~g~~~~~l~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~Dsg~ 84 (206)
T 1kgc_D 7 NSMESNEEEPVHLPCNHSTISG-T-DYIHWYRQLPSQGPEYVIHGLTSNVNNRMASLAIAEDRKSSTLILHRATLRDAAV 84 (206)
T ss_dssp SEEEEETTSCEEEEEEESCCCT-T-CCEEEEEECTTSCCEEEEEESSSSEECSSEEEEECTTSSEEEEEESSCCGGGCEE
T ss_pred CeEEEcCCCCEEEEEEEcCCCC-C-ccEEEEEECCCCCcEEEEEECCCCccCCCEEEEEcCCCCEEEEEECCCCcccCcc
Confidence 4578899999999999854121 1 369999886433321121 11 134554432 1 49999999999999
Q ss_pred EEEEeCC
Q psy10772 349 YDCWLGN 355 (378)
Q Consensus 349 Y~C~~~~ 355 (378)
|.|...+
T Consensus 85 Y~C~~~~ 91 (206)
T 1kgc_D 85 YYCILPL 91 (206)
T ss_dssp EEEECCC
T ss_pred EEEEEec
Confidence 9999875
No 494
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=97.14 E-value=0.0019 Score=51.84 Aligned_cols=85 Identities=16% Similarity=0.325 Sum_probs=53.2
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeec-------cCcceEee--cCc---eEEeeecCCCC
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFR-------SDKFIRTV--DGG---LVIMAVEELDA 346 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~-------~~~~~~~~--~~G---LlI~~v~~~Ds 346 (378)
...+.+.+|+++.|.|... + ......+.|+.+...+ ...|... -.+|+... ..| |.|.+|+.+|+
T Consensus 4 p~~v~~~~G~svtl~C~~s-~-~~~~~~~~Wyrq~~g~-~~~li~~~~~~~~~~~~R~s~~~~~~~~~~L~I~~l~~~Ds 80 (106)
T 2frg_P 4 PEVLQAPVGSSILVQCHYR-L-QDVKAQKVWCRFLPEG-CQPLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDA 80 (106)
T ss_dssp CEEEEECTTCCEEEEEECC-G-GGTTSEEEEEEEETTE-EEEEEECCBTCEEEETTTEEEEEEETTEEEEEECSCCGGGC
T ss_pred CcEEEEecCCcEEEEeEec-C-CcccCcEEEEECCCCC-CcEEEEeCCcEeeecCCCEEEEcCCCCEEEEEEccCCHHHC
Confidence 3457888999999999864 2 1111247898875321 1111110 12344432 223 99999999999
Q ss_pred eEEEEEeCC----eeeEEEeeeec
Q psy10772 347 GKYDCWLGN----TVLCTHNLTVD 366 (378)
Q Consensus 347 G~Y~C~~~~----~~l~~~~~~v~ 366 (378)
|.|.|.... +.+....|+|.
T Consensus 81 g~Y~C~~~~~~~~d~~~~v~L~V~ 104 (106)
T 2frg_P 81 GEYGCMVDGARGPQILHRVSLNIL 104 (106)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEeecCCCCCEeEEEEEEEe
Confidence 999999864 44566666664
No 495
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=97.13 E-value=0.001 Score=55.98 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=47.9
Q ss_pred EEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e-c----------cCcceEeecC------ceEEeeecC
Q psy10772 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F-R----------SDKFIRTVDG------GLVIMAVEE 343 (378)
Q Consensus 282 ~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~-~----------~~~~~~~~~~------GLlI~~v~~ 343 (378)
+++.+|+++.|.|...... .....+.|+.+...++...|- . . ..+|+....+ -|.|.+++.
T Consensus 14 ~~v~~G~~vtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 92 (136)
T 3tpk_A 14 GSVQPGGSLRLSCTASGYT-FSQEFVIWFRQAPGKEREIVSGISLRKGWTYYADSVKGRFTISQDNAKNTVYLQMNNLKP 92 (136)
T ss_dssp EEECTTCCEEEEEEEEESG-GGCCEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEccCCCEEEEEEEcccc-cCCcEEEEEEECCCCCcEEEEEEECCCCcEEcCcccCCCEEEEEcCCCCEEEEEECCCCh
Confidence 5788999999999986431 112368999875433322221 1 0 1235544321 299999999
Q ss_pred CCCeEEEEEeCC
Q psy10772 344 LDAGKYDCWLGN 355 (378)
Q Consensus 344 ~DsG~Y~C~~~~ 355 (378)
+|+|.|.|....
T Consensus 93 ~Dsg~Y~C~~~~ 104 (136)
T 3tpk_A 93 EDTAMYYCAAAP 104 (136)
T ss_dssp GGCEEEEEEEES
T ss_pred hhCEEEEEEEEe
Confidence 999999999864
No 496
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=97.13 E-value=0.00091 Score=54.22 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=46.4
Q ss_pred ceeEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEe-e----------ccCcceEee-----cCceEEeeec
Q psy10772 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK-F----------RSDKFIRTV-----DGGLVIMAVE 342 (378)
Q Consensus 279 ~k~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~-~----------~~~~~~~~~-----~~GLlI~~v~ 342 (378)
...+.+.+|+++.|+|............|.|+.+.. .....|- . +-..|+... +-.|.|.+|+
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~-~~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 86 (119)
T 2pnd_A 8 PESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHG-SDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSLQINTLQ 86 (119)
T ss_dssp CSEEEEETTSCEEECCBCCCCTTCEEEEEEEEEEET-TEEEEEEEEETTEEECCSGGGTTTEEECCSSTTBCCEEESSCC
T ss_pred CceEEEEcCCcEEEEEEEcCCCCCCceEEEEEEeCC-CCceEEEEEcCCCceeecccccCcEEEccCCCCCEEEEEccCC
Confidence 456789999999999986432221111369988732 1111121 1 012343322 1249999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|....
T Consensus 87 ~~D~G~Y~C~v~~ 99 (119)
T 2pnd_A 87 MDDRNHYTCEVTW 99 (119)
T ss_dssp GGGCEEEEEEEEE
T ss_pred cccCEEEEEEEEE
Confidence 9999999998743
No 497
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.12 E-value=0.00046 Score=64.57 Aligned_cols=69 Identities=10% Similarity=0.177 Sum_probs=47.9
Q ss_pred cceeEEEEeCCeeeeeeeeccC----CCCCCCCeEEEEecccCceeeEeeccCcceEeecC---ceEEeeecCCCCeEEE
Q psy10772 278 GRLKQTVTWGQSVHLSCFVKLP----ASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG---GLVIMAVEELDAGKYD 350 (378)
Q Consensus 278 ~~k~~~~~~G~s~~L~C~~r~~----~~La~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~---GLlI~~v~~~DsG~Y~ 350 (378)
..+.+.+..|+++.|.|..... +..+.|.|.|++++.. |. .+ ++.+.+. -|.|.+++..| |.|.
T Consensus 10 ~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~-----i~--~~-~~~~~~~~~~~L~i~~~~~~~-g~Y~ 80 (303)
T 1i1r_A 10 SPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFT-----IP--KE-QYTIINRTASSVTFTDIASLN-IQLT 80 (303)
T ss_dssp ESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEE-----CC--GG-GCEEEETTEEEEEECSCCCSE-EEEE
T ss_pred ccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEE-----CC--hh-heeeeCCcEEEEEEcCcCCCc-eEEE
Confidence 4456788999999999998742 1223358999998753 42 22 3222222 39999999885 9999
Q ss_pred EEeCC
Q psy10772 351 CWLGN 355 (378)
Q Consensus 351 C~~~~ 355 (378)
|.+.+
T Consensus 81 C~a~~ 85 (303)
T 1i1r_A 81 CNILT 85 (303)
T ss_dssp EEEEE
T ss_pred Eeccc
Confidence 99865
No 498
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.12 E-value=0.00039 Score=65.06 Aligned_cols=64 Identities=19% Similarity=0.213 Sum_probs=44.2
Q ss_pred EEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcce--EeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI--RTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 284 ~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~~--~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
+.+|+++.|.|....++ +.+.|+.++........ .... ......|.|.+|+.+|+|.|.|.+.|
T Consensus 130 v~~G~~v~L~C~~~~~~----~~~~w~k~g~~~~~~~~----~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 195 (316)
T 3vh8_G 130 VKSGERVILQCWSDIMF----EHFFLHKEGISKDPSRL----VGQIHDGVSKANFSIGPMMLALAGTYRCYGSV 195 (316)
T ss_dssp EETTCCEEEEEEESSCC----SEEEEEETTCCSCCEEE----ECEEETTEEEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cCCCCeEEEEEcCCCCC----cEEEEEECCCcccccee----eeeecCCCceEEEEECCCChhhCceEEEEEec
Confidence 77899999999985432 37899988764211000 0000 01334599999999999999999986
No 499
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.12 E-value=0.0003 Score=64.62 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=42.9
Q ss_pred EEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEeeccCcc-eEeecCceEEeeecCCCCeEEEEEeCC
Q psy10772 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKF-IRTVDGGLVIMAVEELDAGKYDCWLGN 355 (378)
Q Consensus 283 ~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~~~~~~-~~~~~~GLlI~~v~~~DsG~Y~C~~~~ 355 (378)
.+.+|+++.|.|....+ .+.+.|+.++.. +....... ......-|.|.+|+.+|+|.|.|.+.+
T Consensus 17 ~v~~G~~VtL~C~~~~~----~~~~~w~k~g~~-----~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNYG----AVEYQLHFEGSL-----FAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp EEETTCCEEEEEECCTT----CCEEEEEETTEE-----EEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ccCCCCcEEEEEeeCCC----CcEEEEEECCCc-----cccccccccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 67889999999997532 236899876643 21100111 111233489999999999999999854
No 500
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4, immune system, zinc-finger, polymorphism, metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H* 2a9m_H
Probab=97.11 E-value=0.0014 Score=56.42 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=49.0
Q ss_pred eEEEEeCCeeeeeeeeccCCCCCCCCeEEEEecccCceeeEee-c-----------cCcceEeec---C---ceEEeeec
Q psy10772 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKF-R-----------SDKFIRTVD---G---GLVIMAVE 342 (378)
Q Consensus 281 ~~~~~~G~s~~L~C~~r~~~~La~~~v~W~~~~~~~~~~~l~~-~-----------~~~~~~~~~---~---GLlI~~v~ 342 (378)
.+.+.+|+++.|.|...+.. .....+.|+.+...++...|-. . ..+|+.... . -|.|.+++
T Consensus 9 ~~~v~~G~svtL~C~~s~~~-~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~ 87 (153)
T 2vyr_E 9 GGLVQPGGSLRLSCAASGFT-FEEYAMLWVRQAPGKGLEWVSGINARGYTTYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (153)
T ss_dssp CEEECTTCCEEEEEEEESSC-GGGCCEEEEEECTTSCCEEEEEECTTSCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CEEEecCCCEEEEEEEeCCc-cCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcCC
Confidence 46788999999999985321 1123689998864333222211 1 123554432 2 29999999
Q ss_pred CCCCeEEEEEeCC
Q psy10772 343 ELDAGKYDCWLGN 355 (378)
Q Consensus 343 ~~DsG~Y~C~~~~ 355 (378)
.+|+|.|.|...+
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (153)
T 2vyr_E 88 TEDTAVYYCAKPW 100 (153)
T ss_dssp GGGCEEEEEEECS
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999864
Done!