Your job contains 1 sequence.
>psy10772
MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYI
NCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGD
DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPG
QCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTS
EYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPA
SMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCT
HNLTVDAHSNVADAPTRL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10772
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011260 - symbol:Sema-2a "Sema-2a" species:7227 "D... 850 4.6e-120 2
FB|FBgn0264273 - symbol:Sema-2b "Semaphorin-2b" species:7... 830 1.3e-113 2
FB|FBgn0011259 - symbol:Sema-1a "Sema-1a" species:7227 "D... 551 9.3e-53 1
FB|FBgn0016059 - symbol:Sema-1b "Sema-1b" species:7227 "D... 538 8.6e-52 1
ZFIN|ZDB-GENE-040724-119 - symbol:sema6e "sema domain, tr... 487 2.2e-45 1
UNIPROTKB|A6NM95 - symbol:SEMA6D "Semaphorin-6D" species:... 474 4.4e-45 1
UNIPROTKB|I3LRN7 - symbol:SEMA6D "Uncharacterized protein... 480 1.1e-44 1
UNIPROTKB|E1BNY3 - symbol:SEMA6D "Uncharacterized protein... 480 1.3e-44 1
UNIPROTKB|F1SN61 - symbol:SEMA6D "Uncharacterized protein... 480 1.3e-44 1
RGD|1310910 - symbol:Sema6d "sema domain, transmembrane d... 478 2.1e-44 1
UNIPROTKB|E2RSC6 - symbol:SEMA6D "Uncharacterized protein... 478 2.2e-44 1
MGI|MGI:2387661 - symbol:Sema6d "sema domain, transmembra... 475 4.4e-44 1
UNIPROTKB|Q8NFY4 - symbol:SEMA6D "Semaphorin-6D" species:... 474 5.6e-44 1
UNIPROTKB|E1BXZ0 - symbol:SEMA6D "Uncharacterized protein... 473 7.4e-44 1
UNIPROTKB|E1BP81 - symbol:SEMA6A "Uncharacterized protein... 470 1.4e-43 1
UNIPROTKB|F1NJN3 - symbol:SEMA5A "Uncharacterized protein... 451 1.5e-43 2
RGD|1305493 - symbol:Sema6a "sema domain, transmembrane d... 465 4.4e-43 1
UNIPROTKB|F1RLD2 - symbol:SEMA6A "Uncharacterized protein... 465 4.7e-43 1
MGI|MGI:1203727 - symbol:Sema6a "sema domain, transmembra... 465 4.7e-43 1
UNIPROTKB|I3LF43 - symbol:SEMA6C "Uncharacterized protein... 457 4.8e-43 1
UNIPROTKB|E1C1C2 - symbol:SEMA6A "Uncharacterized protein... 464 6.0e-43 1
UNIPROTKB|Q9H2E6 - symbol:SEMA6A "Semaphorin-6A" species:... 464 6.0e-43 1
ZFIN|ZDB-GENE-040426-1933 - symbol:sema6d "sema domain, t... 462 6.6e-43 1
WB|WBGene00003111 - symbol:mab-20 species:6239 "Caenorhab... 413 8.2e-43 2
UNIPROTKB|E2R4N4 - symbol:SEMA6A "Uncharacterized protein... 462 9.8e-43 1
UNIPROTKB|E2RD30 - symbol:SEMA6C "Uncharacterized protein... 459 1.7e-42 1
ZFIN|ZDB-GENE-050417-171 - symbol:sema6dl "sema domain, t... 460 1.8e-42 1
MGI|MGI:1338032 - symbol:Sema6c "sema domain, transmembra... 458 2.0e-42 1
UNIPROTKB|F1SSX9 - symbol:SEMA6C "Uncharacterized protein... 457 2.6e-42 1
UNIPROTKB|E1BG65 - symbol:SEMA6C "Uncharacterized protein... 457 2.8e-42 1
RGD|1308650 - symbol:Sema5a "sema domain, seven thrombosp... 458 2.9e-42 1
RGD|3659 - symbol:Sema6c "sema domain, transmembrane doma... 456 3.6e-42 1
UNIPROTKB|Q9WTL3 - symbol:Sema6c "Semaphorin-6C" species:... 456 3.6e-42 1
MGI|MGI:107556 - symbol:Sema5a "sema domain, seven thromb... 456 4.8e-42 1
UNIPROTKB|F1MTB6 - symbol:SEMA5B "Uncharacterized protein... 455 6.5e-42 1
UNIPROTKB|Q9H3T2 - symbol:SEMA6C "Semaphorin-6C" species:... 453 6.9e-42 1
UNIPROTKB|F1ML13 - symbol:SEMA5A "Uncharacterized protein... 442 7.3e-42 2
UNIPROTKB|F1PAQ1 - symbol:SEMA5B "Uncharacterized protein... 454 9.2e-42 1
UNIPROTKB|Q13591 - symbol:SEMA5A "Semaphorin-5A" species:... 453 1.0e-41 1
UNIPROTKB|F1PBV7 - symbol:SEMA5A "Uncharacterized protein... 443 1.1e-41 2
UNIPROTKB|F1SQ38 - symbol:SEMA5B "Uncharacterized protein... 450 1.8e-41 1
UNIPROTKB|F1NSD7 - symbol:SEMA5B "Uncharacterized protein... 449 2.2e-41 1
UNIPROTKB|F1S0T6 - symbol:SEMA5A "Uncharacterized protein... 437 4.0e-41 2
UNIPROTKB|E1BIT8 - symbol:SEMA6B "Uncharacterized protein... 423 5.3e-41 2
ZFIN|ZDB-GENE-040724-23 - symbol:si:ch211-168n16.1 "si:ch... 444 5.3e-41 1
UNIPROTKB|B5ME80 - symbol:SEMA5B "Semaphorin-5B" species:... 445 7.5e-41 1
UNIPROTKB|C9JKR3 - symbol:SEMA5B "Semaphorin-5B" species:... 445 7.5e-41 1
UNIPROTKB|F8WAT5 - symbol:SEMA5B "Semaphorin-5B" species:... 445 7.6e-41 1
UNIPROTKB|Q9P283 - symbol:SEMA5B "Semaphorin-5B" species:... 445 8.5e-41 1
ZFIN|ZDB-GENE-030131-8004 - symbol:sema6a "sema domain, t... 441 1.5e-40 1
MGI|MGI:107555 - symbol:Sema5b "sema domain, seven thromb... 442 1.6e-40 1
UNIPROTKB|F6IB19 - symbol:SEMA6B "Semaphorin-6B" species:... 431 4.3e-40 1
MGI|MGI:107558 - symbol:Sema3a "sema domain, immunoglobul... 396 9.4e-40 2
UNIPROTKB|E2RHV1 - symbol:SEMA4C "Uncharacterized protein... 412 1.0e-39 2
RGD|1308914 - symbol:Sema5b "sema domain, seven thrombosp... 434 1.1e-39 1
MGI|MGI:1202889 - symbol:Sema6b "sema domain, transmembra... 432 1.1e-39 1
ZFIN|ZDB-GENE-030131-8969 - symbol:sema5a "sema domain, s... 434 1.1e-39 1
RGD|69278 - symbol:Sema6b "sema domain, transmembrane dom... 432 1.1e-39 1
UNIPROTKB|Q14563 - symbol:SEMA3A "Semaphorin-3A" species:... 392 1.2e-39 2
UNIPROTKB|Q9H3T3 - symbol:SEMA6B "Semaphorin-6B" species:... 431 1.4e-39 1
RGD|3657 - symbol:Sema3a "sema domain, immunoglobulin dom... 396 1.5e-39 2
UNIPROTKB|E2QX94 - symbol:SEMA3A "Uncharacterized protein... 395 2.5e-39 2
UNIPROTKB|F1NVZ5 - symbol:SEMA3A "Semaphorin-3A" species:... 387 3.5e-39 2
UNIPROTKB|Q90607 - symbol:SEMA3A "Semaphorin-3A" species:... 387 3.5e-39 2
MGI|MGI:1860118 - symbol:Sema3d "sema domain, immunoglobu... 379 5.0e-39 2
UNIPROTKB|E1BV84 - symbol:SEMA6B "Uncharacterized protein... 416 6.1e-39 1
UNIPROTKB|F1PX52 - symbol:SEMA6B "Uncharacterized protein... 423 6.3e-39 1
UNIPROTKB|F1MEW1 - symbol:SEMA3A "Uncharacterized protein... 395 7.8e-39 2
UNIPROTKB|F1MAG8 - symbol:Sema3d "Protein Sema3d" species... 379 8.2e-39 2
ZFIN|ZDB-GENE-081105-129 - symbol:si:ch211-87a2.1 "si:ch2... 422 1.3e-38 1
ZFIN|ZDB-GENE-070912-187 - symbol:sema5b "sema domain, se... 424 1.4e-38 1
UNIPROTKB|F1NBU4 - symbol:F1NBU4 "Uncharacterized protein... 363 1.5e-38 2
ZFIN|ZDB-GENE-081105-78 - symbol:si:ch211-106g4.2 "si:ch2... 385 1.6e-38 2
UNIPROTKB|Q9C0C4 - symbol:SEMA4C "Semaphorin-4C" species:... 400 3.3e-38 2
UNIPROTKB|E2R400 - symbol:SEMA3D "Uncharacterized protein... 373 3.7e-38 2
ZFIN|ZDB-GENE-990715-2 - symbol:sema3d "semaphorin 3d" sp... 381 4.0e-38 2
UNIPROTKB|O95025 - symbol:SEMA3D "Semaphorin-3D" species:... 373 6.0e-38 2
MGI|MGI:109252 - symbol:Sema4c "sema domain, immunoglobul... 393 9.4e-38 2
UNIPROTKB|E1BE15 - symbol:SEMA3D "Uncharacterized protein... 368 1.3e-37 2
ZFIN|ZDB-GENE-991209-6 - symbol:sema3ab "semaphorin 3ab" ... 372 1.6e-37 2
UNIPROTKB|I3LBY1 - symbol:I3LBY1 "Uncharacterized protein... 405 1.8e-37 1
UNIPROTKB|Q90663 - symbol:SEMA3D "Semaphorin-3D" species:... 365 5.1e-37 2
RGD|1562837 - symbol:Sema4c "sema domain, immunoglobulin ... 389 5.3e-37 2
UNIPROTKB|F1STD1 - symbol:SEMA4C "Uncharacterized protein... 405 7.7e-37 1
UNIPROTKB|E1BDM5 - symbol:SEMA4C "Uncharacterized protein... 397 5.5e-36 1
ZFIN|ZDB-GENE-991209-3 - symbol:sema3aa "semaphorin 3aa" ... 378 3.2e-35 2
FB|FBgn0250876 - symbol:Sema-5c "Semaphorin-5c" species:7... 383 3.3e-35 2
UNIPROTKB|C9JPG5 - symbol:SEMA3F "Semaphorin-3F" species:... 341 3.5e-35 2
ZFIN|ZDB-GENE-050208-762 - symbol:si:dkey-49n23.1 "si:dke... 380 4.0e-35 2
UNIPROTKB|C9JQ85 - symbol:SEMA3F "Semaphorin-3F" species:... 341 6.0e-35 2
UNIPROTKB|Q13275 - symbol:SEMA3F "Semaphorin-3F" species:... 341 7.3e-35 2
ZFIN|ZDB-GENE-050513-2 - symbol:sema3fb "semaphorin 3fb" ... 338 7.6e-35 2
UNIPROTKB|F1NS29 - symbol:SEMA4D "Semaphorin-4D" species:... 360 8.0e-35 2
ZFIN|ZDB-GENE-070705-31 - symbol:sema4ba "sema domain, im... 357 8.3e-35 2
ZFIN|ZDB-GENE-060503-381 - symbol:sema4ga "sema domain, i... 355 9.0e-35 2
RGD|1310079 - symbol:Sema3b "sema domain, immunoglobulin ... 364 9.2e-35 2
UNIPROTKB|F1MGN0 - symbol:SEMA3F "Uncharacterized protein... 344 1.2e-34 2
UNIPROTKB|J9P0D8 - symbol:SEMA3F "Uncharacterized protein... 342 2.0e-34 2
UNIPROTKB|F6XP73 - symbol:SEMA3F "Uncharacterized protein... 342 2.5e-34 2
UNIPROTKB|F1PSB1 - symbol:SEMA4D "Uncharacterized protein... 370 2.5e-34 2
WARNING: Descriptions of 108 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0011260 [details] [associations]
symbol:Sema-2a "Sema-2a" species:7227 "Drosophila
melanogaster" [GO:0007629 "flight behavior" evidence=IMP]
[GO:0042756 "drinking behavior" evidence=IMP] [GO:0030534 "adult
behavior" evidence=NAS;IMP] [GO:0007632 "visual behavior"
evidence=IMP] [GO:0005576 "extracellular region" evidence=ISS;NAS]
[GO:0007411 "axon guidance" evidence=NAS;IMP] [GO:0016201 "synaptic
target inhibition" evidence=NAS;IMP] [GO:0007431 "salivary gland
development" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IGI] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 EMBL:AE013599 GO:GO:0007411
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0042756 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 GO:GO:0007629 InterPro:IPR003659 SMART:SM00423
GO:GO:0070983 GO:GO:0007632 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
eggNOG:NOG275418 EMBL:L26083 EMBL:AY095026 EMBL:AY128437
EMBL:BT011447 PIR:C49423 RefSeq:NP_477507.1 RefSeq:NP_599130.1
RefSeq:NP_725586.1 RefSeq:NP_995856.1 UniGene:Dm.14046
ProteinModelPortal:Q24323 SMR:Q24323 IntAct:Q24323 MINT:MINT-868206
STRING:Q24323 PaxDb:Q24323 EnsemblMetazoa:FBtr0087089
EnsemblMetazoa:FBtr0087090 GeneID:36846 KEGG:dme:Dmel_CG4700
CTD:36846 FlyBase:FBgn0011260 InParanoid:Q24323 OMA:AVNHEHN
OrthoDB:EOG4QZ61W PhylomeDB:Q24323 ChiTaRS:Sema-2a GenomeRNAi:36846
NextBio:800670 Bgee:Q24323 GermOnline:CG4700 GO:GO:0016201
Uniprot:Q24323
Length = 724
Score = 850 (304.3 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 150/215 (69%), Positives = 184/215 (85%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FVGS+DIG+YV+FFFRETAVEYINCGK+V+SR+ARVCK+D GGKN+L+ NWATYLKA
Sbjct: 252 KPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKA 311
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCSI GEFPFYFNEIQ +Y++P D ++F+ FTTST GL+GSA+CSF I +I+ AF G
Sbjct: 312 RLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNG 371
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
KFKEQ++S SAWLPVL+SRVPEPRPG CVNDT LPD+VLNFIRSHPLMD+AV H N P
Sbjct: 372 KFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNP 431
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
V+Y+RDL+FT LVVD ++ ++ EYIVY+ T
Sbjct: 432 VYYKRDLVFTKLVVDKIRIDILN--QEYIVYYVGT 464
Score = 352 (129.0 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 60/108 (55%), Positives = 85/108 (78%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+N + IC+SSV + K VT+GQSVHL CFVK+P + N+ ++WYH+SKDKGRY+
Sbjct: 557 LLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKGRYE 616
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
I++ K+I T + GLV+++V E D G+YDC LG ++LC++N+TVDAH
Sbjct: 617 IRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAH 664
Score = 122 (48.0 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRYDNCLQ 35
MEIS+T +SLY+ +D RIKQI L MC RYDNC +
Sbjct: 500 MEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFR 534
>FB|FBgn0264273 [details] [associations]
symbol:Sema-2b "Semaphorin-2b" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=ISS;NAS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:2001020 "regulation of
response to DNA damage stimulus" evidence=IGI] [GO:0016200
"synaptic target attraction" evidence=IMP] [GO:0070983 "dendrite
guidance" evidence=IGI] InterPro:IPR001627 InterPro:IPR015943
Pfam:PF01403 PROSITE:PS51004 SMART:SM00630 EMBL:AE013599
Gene3D:2.130.10.10 GO:GO:0070983 GO:GO:0016200 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
UniGene:Dm.16007 GeneID:246538 KEGG:dme:Dmel_CG33960
FlyBase:FBgn0264273 GenomeRNAi:246538 NextBio:842904 EMBL:BT024285
RefSeq:NP_001137680.1 SMR:Q29QV5 STRING:Q29QV5
EnsemblMetazoa:FBtr0290009 OMA:HAVEYIN Uniprot:Q29QV5
Length = 785
Score = 830 (297.2 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 152/225 (67%), Positives = 185/225 (82%)
Query: 29 RYDNCL--QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQ 86
+YD+ L +P+FVGS++IG++V+FFFRE AVEYINCGK+V+SRVARVCK D GGK ++SQ
Sbjct: 299 KYDSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQ 358
Query: 87 NWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
NWATYLKAR+NCSI EFPFYFNEIQ +YK+P DDTKFY FTT+T GL+GSA+CS+ I
Sbjct: 359 NWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIR 418
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI AF GKFKEQATS SAWLPVL+S+VPEPRPG C NDT TLPDSVLNFIR HPLMD+A
Sbjct: 419 DINAAFDGKFKEQATSNSAWLPVLNSKVPEPRPGTCHNDTATLPDSVLNFIRKHPLMDKA 478
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V H PVF++RD++ T LVVD ++ + E++VYF ATT+
Sbjct: 479 VDHEFGNPVFFKRDVILTKLVVDKIRIDKLN--QEFLVYFVATTS 521
Score = 311 (114.5 bits), Expect = 1.3e-113, Sum P(2) = 1.3e-113
Identities = 54/108 (50%), Positives = 81/108 (75%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
LLQDV+N + IC++SV R K T ++GQ++HLSCFVK+P + + WYH+S +KGRY+
Sbjct: 613 LLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQTRWYHHSTEKGRYE 672
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAH 368
+++ K+I T +GGLV++AV E D G+YD +L T+LC++ +TVDAH
Sbjct: 673 VRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVDAH 720
Score = 100 (40.3 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 2 EISRTHR--SLYVASDERIKQIALVMCAHRYDNCLQ 35
E++ +H+ SLYVA+D ++KQI + MCA RYD+C +
Sbjct: 555 EMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFR 590
>FB|FBgn0011259 [details] [associations]
symbol:Sema-1a "Sema-1a" species:7227 "Drosophila
melanogaster" [GO:0016021 "integral to membrane" evidence=ISS;NAS]
[GO:0007411 "axon guidance" evidence=ISS;IDA;IMP;NAS] [GO:0005886
"plasma membrane" evidence=ISS;IDA] [GO:0007416 "synapse assembly"
evidence=IMP] [GO:0030215 "semaphorin receptor binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016199 "axon midline choice point recognition" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008039 "synaptic
target recognition" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IMP]
[GO:2000305 "semaphorin-plexin signaling pathway involved in
regulation of photoreceptor cell axon guidance" evidence=IGI]
[GO:0045792 "negative regulation of cell size" evidence=IMP]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0005886 EMBL:AE014134
Gene3D:2.130.10.10 GO:GO:0016199 GO:GO:0004872 GO:GO:0048813
GO:GO:0008039 GO:GO:0007416 InterPro:IPR003659 SMART:SM00423
GO:GO:0048854 GO:GO:0031987 GO:GO:0001964 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0030215 eggNOG:NOG293968 InterPro:IPR027231
PANTHER:PTHR11036 EMBL:L26082 RefSeq:NP_723407.2
ProteinModelPortal:Q24322 SMR:Q24322 IntAct:Q24322 STRING:Q24322
PaxDb:Q24322 GeneID:34192 KEGG:dme:Dmel_CG18405 CTD:34192
FlyBase:FBgn0011259 InParanoid:Q24322 KO:K06842 OrthoDB:EOG45TB34
ChiTaRS:Sema-1a GenomeRNAi:34192 NextBio:787331 Bgee:Q24322
GO:GO:2000305 Uniprot:Q24322
Length = 850
Score = 551 (199.0 bits), Expect = 9.3e-53, P = 9.3e-53
Identities = 110/222 (49%), Positives = 147/222 (66%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
P+FV S+ G +V+FFFRETAVE+INCGK+++SRVARVCK D GG + W ++LK+R
Sbjct: 201 PNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSR 260
Query: 96 LNCSIPGEFPFYFNEIQDIYK-VPGD----DTKF-YGVFTTSTTGLMGSAICSFSIEDIE 149
LNCSIPG++PFYFNEIQ V G +K YGVF T + + GSA+C+F+++DI
Sbjct: 261 LNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIA 320
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH 209
F G+FKEQ S WLPV +++VP+PRPG C ND+ LPD LNFI++H LMDE V
Sbjct: 321 DTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPA 380
Query: 210 RDNKPVFYRRDLL--FTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P+ R + FT + VD Q + G + Y V F T
Sbjct: 381 FFSQPILVRTSTIYRFTQIAVDA-QIKTPGGKT-YDVIFVGT 420
>FB|FBgn0016059 [details] [associations]
symbol:Sema-1b "Sema-1b" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS;NAS]
[GO:0007411 "axon guidance" evidence=ISS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=IEP] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 GO:GO:0016020 GO:GO:0001700 Gene3D:2.130.10.10
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 eggNOG:NOG293968 InterPro:IPR027231
PANTHER:PTHR11036 OrthoDB:EOG45TB34 EMBL:AF007158
ProteinModelPortal:O44253 SMR:O44253 STRING:O44253 PaxDb:O44253
PRIDE:O44253 FlyBase:FBgn0016059 InParanoid:O44253
ArrayExpress:O44253 Bgee:O44253 Uniprot:O44253
Length = 770
Score = 538 (194.4 bits), Expect = 8.6e-52, P = 8.6e-52
Identities = 110/242 (45%), Positives = 152/242 (62%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
QPDFVG+ + YV FFFRE ++E +N GK+V+SRVARVCK D GG ++W ++LKA
Sbjct: 227 QPDFVGAIERNGYVLFFFRELSMEVMNFGKAVYSRVARVCKNDRGGPYSHGKSWTSFLKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKV--PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
RLNCS+PGEFPFYF+EIQ I + G + Y VFTTS + GSA+C+F+++DI AF
Sbjct: 287 RLNCSVPGEFPFYFDEIQAISPIVESGSKSLIYAVFTTSVNAIPGSAVCAFNVDDILAAF 346
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G+FK Q S S WLPV +VP+PRPGQCV D+ TL +NFI++HPLM+EAV
Sbjct: 347 DGEFKSQKDSQSHWLPVEREQVPKPRPGQCVEDSRTLTSIAVNFIKNHPLMEEAVPAVHG 406
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEY--IVYFAATTTLRTVFVKVRLLQDVSNTSD 270
+P+ + +L L V +V + Y ++Y T F+ + L ++T D
Sbjct: 407 RPLLTKVNL-HHRLTAIAVHPQVKSLSGAYYDVIYSGTDDGKVTKFINI-LSTHPNSTVD 464
Query: 271 SI 272
+
Sbjct: 465 RL 466
>ZFIN|ZDB-GENE-040724-119 [details] [associations]
symbol:sema6e "sema domain, transmembrane domain
(TM), and cytoplasmic domain, (semaphorin) 6E" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0045499 "chemorepellent
activity" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-040724-119
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 GO:GO:0045499 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101956 EMBL:AL645743 EMBL:CABZ01063756
EMBL:CABZ01063757 EMBL:AB185147 IPI:IPI00509875
RefSeq:NP_001186294.1 UniGene:Dr.154677 Ensembl:ENSDART00000000198
GeneID:556743 KEGG:dre:556743 CTD:556743 NextBio:20881639
Uniprot:E3W9A6
Length = 1064
Score = 487 (176.5 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 105/233 (45%), Positives = 136/233 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P F+ + + G YV+FF E AVEY GK VFSRVARVCK D GG +L
Sbjct: 221 KYDSKWLREPHFLHAIEYGNYVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLE 280
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSF 143
+ W ++LKARLNCS+PG+ FYF+ +Q + V + + GVFTT + GSA+C+F
Sbjct: 281 RYWTSFLKARLNCSVPGDSFFYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAF 340
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--------TETLPDSVLN 195
++DIE+ F GKFKEQ S SAW PV VP+PRPG C D + PD L
Sbjct: 341 YMDDIEKVFNGKFKEQRNSESAWTPVPDEAVPKPRPGSCAGDGPAAGYKSSTNFPDETLT 400
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF 246
FI+S+PLMDEAV +N+P F R F T + VD G Y V F
Sbjct: 401 FIKSYPLMDEAVPSVNNRPCFTRTTSRFKLTQIAVDTAA----GPYKNYTVVF 449
>UNIPROTKB|A6NM95 [details] [associations]
symbol:SEMA6D "Semaphorin-6D" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOGENOM:HOG000232047
HOVERGEN:HBG072910 EMBL:AC018900 EMBL:AC044787 RefSeq:NP_705872.1
UniGene:Hs.511265 GeneID:80031 KEGG:hsa:80031 CTD:80031
HGNC:HGNC:16770 PharmGKB:PA134951035 GenomeRNAi:80031 NextBio:70190
EMBL:AC009558 EMBL:AC012050 EMBL:AC023905 EMBL:AC066615
EMBL:AC084882 IPI:IPI00783744 SMR:A6NM95 STRING:A6NM95
Ensembl:ENST00000355997 Ensembl:ENST00000558816 UCSC:uc001zwa.3
Uniprot:A6NM95
Length = 597
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 102/235 (43%), Positives = 143/235 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRVRY-RLTAISVDHSA-GPYQNYTVIFVGS 443
>UNIPROTKB|I3LRN7 [details] [associations]
symbol:SEMA6D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
EMBL:CU302299 Ensembl:ENSSSCT00000024799 Uniprot:I3LRN7
Length = 1027
Score = 480 (174.0 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 107/258 (41%), Positives = 152/258 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRIRY-RLTAIAVDHSA-GPHQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>UNIPROTKB|E1BNY3 [details] [associations]
symbol:SEMA6D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030215 "semaphorin receptor binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0007275 GO:GO:0005886
GO:GO:0005794 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06842 GeneTree:ENSGT00690000101956 CTD:80031
OMA:YIAGRDQ EMBL:DAAA02029127 EMBL:DAAA02029128 IPI:IPI00827456
RefSeq:NP_001178062.1 UniGene:Bt.19862 PRIDE:E1BNY3
Ensembl:ENSBTAT00000022349 GeneID:518458 KEGG:bta:518458
NextBio:20872655 Uniprot:E1BNY3
Length = 1073
Score = 480 (174.0 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 107/258 (41%), Positives = 152/258 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRIRY-RLTAIAVDHSA-GPHQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>UNIPROTKB|F1SN61 [details] [associations]
symbol:SEMA6D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030215 "semaphorin receptor binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0007275 GO:GO:0005886
GO:GO:0005794 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06842 GeneTree:ENSGT00690000101956 CTD:80031
OMA:YIAGRDQ EMBL:CU302299 RefSeq:XP_003121572.1 UniGene:Ssc.6662
Ensembl:ENSSSCT00000005149 GeneID:100511850 KEGG:ssc:100511850
Uniprot:F1SN61
Length = 1073
Score = 480 (174.0 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 107/258 (41%), Positives = 152/258 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRIRY-RLTAIAVDHSA-GPHQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>RGD|1310910 [details] [associations]
symbol:Sema6d "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6D" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630 RGD:1310910
GO:GO:0016021 GO:GO:0007275 GO:GO:0005886 GO:GO:0005794
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 IPI:IPI00364254 Ensembl:ENSRNOT00000046514
UCSC:RGD:1310910 OrthoDB:EOG4V9TPW ArrayExpress:D4ACX9
Uniprot:D4ACX9
Length = 1073
Score = 478 (173.3 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 106/258 (41%), Positives = 153/258 (59%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPTVI-GVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
+FI+SHPLMD AV ++P F + + + ++V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>UNIPROTKB|E2RSC6 [details] [associations]
symbol:SEMA6D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007275
GO:GO:0005886 GO:GO:0005794 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
OMA:YIAGRDQ EMBL:AAEX03016108 EMBL:AAEX03016109
Ensembl:ENSCAFT00000022132 NextBio:20853645 Uniprot:E2RSC6
Length = 1086
Score = 478 (173.3 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 107/258 (41%), Positives = 152/258 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDAAVPPIADEPWFTKTRIRY-RLTAIAVDHTA-GPHQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>MGI|MGI:2387661 [details] [associations]
symbol:Sema6d "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6D" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IPI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 MGI:MGI:2387661 GO:GO:0016021
GO:GO:0005886 GO:GO:0005794 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOVERGEN:HBG072910
GeneTree:ENSGT00690000101956 CTD:80031 OMA:YIAGRDQ EMBL:AB091532
EMBL:AB091533 EMBL:AB091534 EMBL:AB091535 EMBL:AB091536
EMBL:AK122515 EMBL:AL935323 EMBL:BC060680 IPI:IPI00396759
IPI:IPI00408849 IPI:IPI00469540 IPI:IPI00469637 IPI:IPI00675977
IPI:IPI00754823 RefSeq:NP_766125.2 RefSeq:NP_954708.1
RefSeq:NP_954709.1 RefSeq:NP_954710.1 RefSeq:NP_954711.1
UniGene:Mm.330536 ProteinModelPortal:Q76KF0 SMR:Q76KF0
STRING:Q76KF0 PhosphoSite:Q76KF0 PaxDb:Q76KF0 PRIDE:Q76KF0
Ensembl:ENSMUST00000051419 Ensembl:ENSMUST00000076335
Ensembl:ENSMUST00000077847 Ensembl:ENSMUST00000078621
Ensembl:ENSMUST00000103238 Ensembl:ENSMUST00000103239
Ensembl:ENSMUST00000103241 GeneID:214968 KEGG:mmu:214968
UCSC:uc008mbr.2 UCSC:uc008mbt.2 InParanoid:Q76KF0 NextBio:374545
Bgee:Q76KF0 Genevestigator:Q76KF0 GermOnline:ENSMUSG00000027200
Uniprot:Q76KF0
Length = 1073
Score = 475 (172.3 bits), Expect = 4.4e-44, P = 4.4e-44
Identities = 106/258 (41%), Positives = 152/258 (58%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
FI+SHPLMD AV ++P F + + + ++V + G Y V F +
Sbjct: 391 AFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAIEVDRSA--GPYQNYTVIFVGSEA--G 446
Query: 255 VFVKVRLLQDVSNTSDSI 272
V +KV + +DS+
Sbjct: 447 VVLKVLAKTSPFSLNDSV 464
>UNIPROTKB|Q8NFY4 [details] [associations]
symbol:SEMA6D "Semaphorin-6D" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030215 "semaphorin receptor
binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0005886 GO:GO:0005794 Reactome:REACT_111045
GO:GO:0007411 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOVERGEN:HBG072910
EMBL:AF389426 EMBL:AF389427 EMBL:AF389428 EMBL:AF389429
EMBL:AF389430 EMBL:AB040912 EMBL:AC018900 EMBL:AC044787
EMBL:BC150253 IPI:IPI00170551 IPI:IPI00170617 IPI:IPI00178302
IPI:IPI00332846 IPI:IPI00374169 IPI:IPI00465042 IPI:IPI00657834
RefSeq:NP_001185928.1 RefSeq:NP_065909.1 RefSeq:NP_079242.2
RefSeq:NP_705869.1 RefSeq:NP_705870.1 RefSeq:NP_705871.1
RefSeq:NP_705872.1 UniGene:Hs.511265 ProteinModelPortal:Q8NFY4
SMR:Q8NFY4 STRING:Q8NFY4 PhosphoSite:Q8NFY4 DMDM:74715611
PaxDb:Q8NFY4 PRIDE:Q8NFY4 Ensembl:ENST00000316364
Ensembl:ENST00000354744 Ensembl:ENST00000358066
Ensembl:ENST00000389425 Ensembl:ENST00000389428
Ensembl:ENST00000389432 Ensembl:ENST00000389433
Ensembl:ENST00000536845 Ensembl:ENST00000537942
Ensembl:ENST00000558014 GeneID:80031 KEGG:hsa:80031 UCSC:uc001zvw.3
UCSC:uc001zvx.1 UCSC:uc001zvy.3 UCSC:uc001zvz.3 UCSC:uc001zwc.3
CTD:80031 GeneCards:GC15P047476 HGNC:HGNC:16770 HPA:HPA043109
MIM:609295 neXtProt:NX_Q8NFY4 PharmGKB:PA134951035
InParanoid:Q8NFY4 OMA:YIAGRDQ GenomeRNAi:80031 NextBio:70190
ArrayExpress:Q8NFY4 Bgee:Q8NFY4 Genevestigator:Q8NFY4
GermOnline:ENSG00000137872 Uniprot:Q8NFY4
Length = 1073
Score = 474 (171.9 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 102/235 (43%), Positives = 143/235 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+FI+SHPLMD AV ++P F + + + L V + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPPIADEPWFTKTRVRY-RLTAISVDHSA-GPYQNYTVIFVGS 443
>UNIPROTKB|E1BXZ0 [details] [associations]
symbol:SEMA6D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007275
GO:GO:0005886 GO:GO:0005794 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
OMA:YIAGRDQ EMBL:AADN02045259 EMBL:AADN02045260 EMBL:AADN02045261
EMBL:AADN02045262 EMBL:AADN02045263 IPI:IPI00585903
Ensembl:ENSGALT00000007734 Uniprot:E1BXZ0
Length = 1083
Score = 473 (171.6 bits), Expect = 7.4e-44, P = 7.4e-44
Identities = 102/236 (43%), Positives = 142/236 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + + G YV+FFFRE AVE+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 212 KYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLE 271
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LKARLNCS+PG+ FYF+ +Q DI ++ G T GVFTT + GSA+C+
Sbjct: 272 KHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIEINGIPT-VVGVFTTQLNSIPGSAVCA 330
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND--TET------LPDSVL 194
FS++DIE+ F G+FKEQ T S W V +VP+PRPG C E PD L
Sbjct: 331 FSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDETL 390
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYR-RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+FI+SHPLMD AV +P F + R L + + + G Y V F +
Sbjct: 391 SFIKSHPLMDSAVPSIIEEPWFTKTRVSLDRYRLTAIAVDHAAGPHQNYTVIFVGS 446
>UNIPROTKB|E1BP81 [details] [associations]
symbol:SEMA6A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001224 "positive regulation of neuron migration"
evidence=IEA] [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0051642 "centrosome localization" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0001764 GO:GO:0005887 Gene3D:2.130.10.10 GO:GO:0051642
GO:GO:0004888 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06842 CTD:57556 OMA:DQPKMSE GO:GO:2001224
GeneTree:ENSGT00690000101956 EMBL:DAAA02020024 IPI:IPI00840096
RefSeq:NP_001180138.1 UniGene:Bt.53457 Ensembl:ENSBTAT00000043906
GeneID:516019 KEGG:bta:516019 NextBio:20872098 Uniprot:E1BP81
Length = 1029
Score = 470 (170.5 bits), Expect = 1.4e-43, P = 1.4e-43
Identities = 96/209 (45%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHIHGRDVVL-ATFSTPYNSIPGSAVCAYDMHDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>UNIPROTKB|F1NJN3 [details] [associations]
symbol:SEMA5A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0008046 "axon guidance receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS51004 SMART:SM00630 GO:GO:0016021
GO:GO:0007411 Gene3D:2.130.10.10 InterPro:IPR000884 Pfam:PF00090
SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR003659
SMART:SM00423 GO:GO:0008046 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
OMA:DSNFIPE EMBL:AADN02007903 EMBL:AADN02007904 EMBL:AADN02007905
EMBL:AADN02007906 EMBL:AADN02007907 EMBL:AADN02007908
EMBL:AADN02007909 EMBL:AADN02007910 EMBL:AADN02007911
EMBL:AADN02007912 EMBL:AADN02007913 EMBL:AADN02007914
EMBL:AADN02007915 EMBL:AADN02007916 EMBL:AADN02007917
EMBL:AADN02007918 EMBL:AADN02007919 IPI:IPI00596940
Ensembl:ENSGALT00000021302 Uniprot:F1NJN3
Length = 983
Score = 451 (163.8 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 105/242 (43%), Positives = 140/242 (57%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GGK +L W T++KA
Sbjct: 125 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGKFVLEDTWTTFMKA 183
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 184 RLNCSRPGEIPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAITQAFNG 242
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTE----TLPDSVLNFIRSHPLMDEAVAH 209
FK Q S SAWLP P P P QC + L + L + LM E V
Sbjct: 243 PFKYQENSRSAWLPY-----PNPNPNFQCGTMDQGLYVNLTERNLQDAQKFFLMHEVVQP 297
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTS 269
P F + F+H+VVDVVQ + +I+Y A T T+ ++L ++ TS
Sbjct: 298 VIPIPYFMEDNSRFSHVVVDVVQGK---DMLFHIIYLA--TDYGTI---KKVLAPMNQTS 349
Query: 270 DS 271
S
Sbjct: 350 SS 351
Score = 45 (20.9 bits), Expect = 1.5e-43, Sum P(2) = 1.5e-43
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 352 WLGNTVLC-THNLTVDAH 368
W + +C T NLTVD H
Sbjct: 434 WEQSITVCPTRNLTVDGH 451
>RGD|1305493 [details] [associations]
symbol:Sema6a "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6A" species:10116 "Rattus
norvegicus" [GO:0001764 "neuron migration" evidence=ISO]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0007166
"cell surface receptor signaling pathway" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=ISO] [GO:0051642 "centrosome localization" evidence=ISO]
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=ISO]
[GO:2001224 "positive regulation of neuron migration" evidence=ISO]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 RGD:1305493 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101956 IPI:IPI00569496
Ensembl:ENSRNOT00000040924 UCSC:RGD:1305493 ArrayExpress:D4A5V0
Uniprot:D4A5V0
Length = 1005
Score = 465 (168.7 bits), Expect = 4.4e-43, P = 4.4e-43
Identities = 95/209 (45%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>UNIPROTKB|F1RLD2 [details] [associations]
symbol:SEMA6A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001224 "positive regulation of neuron migration"
evidence=IEA] [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0051642 "centrosome localization" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0001764 GO:GO:0005887 Gene3D:2.130.10.10 GO:GO:0051642
GO:GO:0004888 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06842 CTD:57556 OMA:DQPKMSE GO:GO:2001224
GeneTree:ENSGT00690000101956 EMBL:CU462927 RefSeq:XP_003123902.1
RefSeq:XP_003354294.1 Ensembl:ENSSSCT00000015542 GeneID:100522008
KEGG:ssc:100522008 Uniprot:F1RLD2
Length = 1030
Score = 465 (168.7 bits), Expect = 4.7e-43, P = 4.7e-43
Identities = 95/209 (45%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>MGI|MGI:1203727 [details] [associations]
symbol:Sema6a "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6A" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IMP;NAS] [GO:0016020 "membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030215 "semaphorin receptor
binding" evidence=IGI;IPI] [GO:0030424 "axon" evidence=NAS]
[GO:0051642 "centrosome localization" evidence=IMP] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=IMP] [GO:2001224
"positive regulation of neuron migration" evidence=IMP]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 EMBL:AF030430 MGI:MGI:1203727 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0005887 Gene3D:2.130.10.10
GO:GO:0030424 GO:GO:0051642 Reactome:REACT_127416 GO:GO:0004888
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
PDB:3AL8 PDB:3OKY PDBsum:3AL8 PDBsum:3OKY GO:GO:0071526
GO:GO:0030215 eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06842 CTD:57556 HOGENOM:HOG000232047 HOVERGEN:HBG072910
OrthoDB:EOG46WZ7N ChiTaRS:SEMA6A GO:GO:2001224 EMBL:AF288666
EMBL:BC059238 EMBL:BC062979 IPI:IPI00270823 IPI:IPI00474378
IPI:IPI00480518 RefSeq:NP_061214.2 UniGene:Mm.40909 PDB:3AFC
PDB:3OKW PDBsum:3AFC PDBsum:3OKW ProteinModelPortal:O35464
SMR:O35464 DIP:DIP-59220N STRING:O35464 PhosphoSite:O35464
PRIDE:O35464 Ensembl:ENSMUST00000019791 Ensembl:ENSMUST00000076043
Ensembl:ENSMUST00000156422 GeneID:20358 KEGG:mmu:20358
UCSC:uc008ewa.1 UCSC:uc008ewb.1 GeneTree:ENSGT00690000101956
InParanoid:O35464 EvolutionaryTrace:O35464 NextBio:298237
Bgee:O35464 Genevestigator:O35464 GermOnline:ENSMUSG00000019647
Uniprot:O35464
Length = 1031
Score = 465 (168.7 bits), Expect = 4.7e-43, P = 4.7e-43
Identities = 95/209 (45%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIINRPWFLRTMVRYRLTKIAVD 426
>UNIPROTKB|I3LF43 [details] [associations]
symbol:SEMA6C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
InterPro:IPR015514 PANTHER:PTHR11036:SF9 EMBL:CU138569
Ensembl:ENSSSCT00000025723 Uniprot:I3LF43
Length = 678
Score = 457 (165.9 bits), Expect = 4.8e-43, P = 4.8e-43
Identities = 97/216 (44%), Positives = 130/216 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 215 KYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 274
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 275 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLYGRSALF-GVFTTQTNSIPGSAVCA 333
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV RVP PRPG C + LPD VL
Sbjct: 334 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVL 393
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 394 TFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 429
>UNIPROTKB|E1C1C2 [details] [associations]
symbol:SEMA6A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001764 "neuron migration" evidence=IEA]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0051642 "centrosome localization" evidence=IEA]
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IEA]
[GO:2001224 "positive regulation of neuron migration" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0005887 Gene3D:2.130.10.10 GO:GO:0051642
GO:GO:0004888 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06842 CTD:57556 OMA:DQPKMSE GO:GO:2001224
GeneTree:ENSGT00690000101956 EMBL:AADN02070615 EMBL:AADN02070616
EMBL:AADN02070617 EMBL:AADN02070618 IPI:IPI00582719
RefSeq:XP_424960.2 UniGene:Gga.17547 Ensembl:ENSGALT00000003608
GeneID:427387 KEGG:gga:427387 NextBio:20828654 Uniprot:E1C1C2
Length = 1027
Score = 464 (168.4 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 100/226 (44%), Positives = 130/226 (57%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY + GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGNYIYFFFREIAVEYNSMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHFNGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C T PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSTSLEKYATSSEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVDVVQYEVFGTTSEYIVYF 246
MDEAV N+P F R + + T + VD G Y V F
Sbjct: 398 MDEAVPSIVNRPWFLRTMVRYRLTKITVD----SAAGPYKNYTVVF 439
>UNIPROTKB|Q9H2E6 [details] [associations]
symbol:SEMA6A "Semaphorin-6A" species:9606 "Homo sapiens"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0030215
"semaphorin receptor binding" evidence=IEA] [GO:0051642 "centrosome
localization" evidence=IEA] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA] [GO:2001224 "positive regulation
of neuron migration" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=NAS] [GO:0030424 "axon" evidence=NAS] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0007399 "nervous system
development" evidence=NAS] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0007411 "axon guidance" evidence=NAS;TAS]
[GO:0007166 "cell surface receptor signaling pathway" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007010
"cytoskeleton organization" evidence=NAS] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411
GO:GO:0001764 GO:GO:0007010 GO:GO:0005887 Gene3D:2.130.10.10
GO:GO:0030424 GO:GO:0051642 GO:GO:0009887 GO:GO:0007166
GO:GO:0004888 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 eggNOG:NOG293968 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06842 EMBL:AF279656 EMBL:AB037789
EMBL:AC008524 EMBL:AC010296 EMBL:AC027304 IPI:IPI00002211
IPI:IPI00240598 RefSeq:NP_065847.1 UniGene:Hs.156967
ProteinModelPortal:Q9H2E6 SMR:Q9H2E6 IntAct:Q9H2E6 STRING:Q9H2E6
PhosphoSite:Q9H2E6 DMDM:296452903 PRIDE:Q9H2E6 DNASU:57556
Ensembl:ENST00000257414 Ensembl:ENST00000343348
Ensembl:ENST00000510263 GeneID:57556 KEGG:hsa:57556 UCSC:uc003krx.4
UCSC:uc010jcj.3 CTD:57556 GeneCards:GC05M115807 H-InvDB:HIX0120999
H-InvDB:HIX0164350 HGNC:HGNC:10738 HPA:HPA031265 MIM:605885
neXtProt:NX_Q9H2E6 PharmGKB:PA35660 HOGENOM:HOG000232047
HOVERGEN:HBG072910 OMA:DQPKMSE OrthoDB:EOG46WZ7N ChiTaRS:SEMA6A
GenomeRNAi:57556 NextBio:64038 ArrayExpress:Q9H2E6 Bgee:Q9H2E6
CleanEx:HS_SEMA6A Genevestigator:Q9H2E6 GermOnline:ENSG00000092421
GO:GO:2001224 Uniprot:Q9H2E6
Length = 1030
Score = 464 (168.4 bits), Expect = 6.0e-43, P = 6.0e-43
Identities = 95/209 (45%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ ++ G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAS 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSIFNRPWFLRTMVRYRLTKIAVD 426
>ZFIN|ZDB-GENE-040426-1933 [details] [associations]
symbol:sema6d "sema domain, transmembrane domain
(TM), and cytoplasmic domain, (semaphorin) 6D" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001627 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-040426-1933 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 SUPFAM:SSF103575 SUPFAM:SSF101912
eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000232047 HOVERGEN:HBG072910
GeneTree:ENSGT00690000101956 EMBL:CU571385 IPI:IPI00489323
UniGene:Dr.6935 Ensembl:ENSDART00000136361 Uniprot:B8JMB1
Length = 898
Score = 462 (167.7 bits), Expect = 6.6e-43, P = 6.6e-43
Identities = 95/216 (43%), Positives = 135/216 (62%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILS 85
+YD+ +P F+ + + G YV+FFF E AVE+ GK V+SRVARVCK D GG +L
Sbjct: 226 KYDSKWLREPHFLHAVEYGNYVYFFFSEIAVEHTAAGKVVYSRVARVCKNDNGGSTRVLD 285
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTK--FYGVFTTSTTGLMGSAICSF 143
++W ++LKARLNCS+PG+ FYF+ +Q + V + + GVFTT T + GSA+C F
Sbjct: 286 RHWTSFLKARLNCSVPGDTFFYFDVLQSLTNVLQINQRPAVVGVFTTQTNSIPGSAVCGF 345
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLN 195
++DIER F G+FKEQ S S W V +VP+PRPG C + PDSVL+
Sbjct: 346 YLDDIERVFNGRFKEQKNSDSMWTAVPEEQVPKPRPGSCAGEGSASSYSSSVQFPDSVLS 405
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDLLF--THLVVD 229
FI++HPLM+E+V +++P+ + T +VVD
Sbjct: 406 FIKTHPLMEESVPSVNSQPLITNTASSYKLTQIVVD 441
>WB|WBGene00003111 [details] [associations]
symbol:mab-20 species:6239 "Caenorhabditis elegans"
[GO:0030155 "regulation of cell adhesion" evidence=IGI;IMP]
[GO:0045138 "tail tip morphogenesis" evidence=IGI;IMP] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IMP] [GO:0010172
"embryonic body morphogenesis" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0007413 "axonal fasciculation" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR001627 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007411 GO:GO:0005576 GO:GO:0009986 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 GO:GO:0030155 Gene3D:2.130.10.10
GO:GO:0004872 GO:GO:0030334 GO:GO:0032956 GO:GO:0016331
GO:GO:0007413 GO:GO:0045138 GO:GO:0010172 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 EMBL:FO080942
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
EMBL:AF216968 RefSeq:NP_001021820.1 RefSeq:NP_490875.1 HSSP:Q92854
ProteinModelPortal:Q95XP4 SMR:Q95XP4 STRING:Q95XP4 PaxDb:Q95XP4
PRIDE:Q95XP4 EnsemblMetazoa:Y71G12B.20a GeneID:171727
KEGG:cel:CELE_Y71G12B.20 UCSC:Y71G12B.20a CTD:171727
WormBase:Y71G12B.20a WormBase:Y71G12B.20b eggNOG:NOG275418
HOGENOM:HOG000154283 InParanoid:Q95XP4 OMA:WAYNIND NextBio:872447
Uniprot:Q95XP4
Length = 658
Score = 413 (150.4 bits), Expect = 8.2e-43, Sum P(2) = 8.2e-43
Identities = 81/197 (41%), Positives = 122/197 (61%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P FVGS+D+G++VFFFFRE A + + V SRVARVCK+D GG+N+L Q W +++KA
Sbjct: 213 EPQFVGSFDVGQHVFFFFREIAHDNSFGERIVHSRVARVCKKDIGGRNVLRQVWTSFVKA 272
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGD-DTKFYGVFTTSTTGLMGSAICSFSIEDIERAF- 152
RLNCS+ FPFYF+ IQ + +V +T FY F+TS T SAIC F + I
Sbjct: 273 RLNCSVSANFPFYFDHIQSVKRVDKHGETYFYATFSTSETAFTSSAICMFQLSSINHLLD 332
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
G E+ + + V + +P RPG C ++ ++ D+ L+F ++H L+ ++++
Sbjct: 333 TGLLMEE--TANGQFSVTADEIPAHRPGTCSQNSHSISDTDLHFAKTHLLVSDSIS--GG 388
Query: 213 KPVFYRRDLLFTHLVVD 229
P+ RD +FTH+VVD
Sbjct: 389 TPILPLRDHVFTHIVVD 405
Score = 65 (27.9 bits), Expect = 8.2e-43, Sum P(2) = 8.2e-43
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 327 KFIRTVDGGLVIMAVEELDAGKYDCWLGNTVLCTHNLTVDAHSNVADAPT 376
+ + T +G LV++ + DAG Y+C N +L + V H N A PT
Sbjct: 568 RHVVTRNGELVVLDAQLEDAGTYECLRDNIILVRARIVV--HENCA-RPT 614
>UNIPROTKB|E2R4N4 [details] [associations]
symbol:SEMA6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001224 "positive regulation of neuron
migration" evidence=IEA] [GO:0071526 "semaphorin-plexin signaling
pathway" evidence=IEA] [GO:0051642 "centrosome localization"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0004888 "transmembrane signaling receptor
activity" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0001764 GO:GO:0005887
Gene3D:2.130.10.10 GO:GO:0051642 GO:GO:0004888 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0071526
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 CTD:57556
OMA:DQPKMSE GO:GO:2001224 GeneTree:ENSGT00690000101956
EMBL:AAEX03007713 RefSeq:XP_858843.1 Ensembl:ENSCAFT00000000309
GeneID:481432 KEGG:cfa:481432 NextBio:20856228 Uniprot:E2R4N4
Length = 1030
Score = 462 (167.7 bits), Expect = 9.8e-43, P = 9.8e-43
Identities = 95/209 (45%), Positives = 126/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D G Y++FFFRE AVEY GK VF RVA+VCK D GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN +Q D+ + G D F+T + GSA+C++ + DI
Sbjct: 279 ARLNCSVPGDSHFYFNILQAVTDVIHINGRDVVL-ATFSTPYNSIPGSAVCAYDMLDIAN 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
F G+FKEQ + S W PV RVP+PRPG C + PD LNFI++HPL
Sbjct: 338 VFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLEKYTTSNEFPDDTLNFIKTHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
MDEAV N+P F R + + T + VD
Sbjct: 398 MDEAVPSVINRPWFLRTMVRYRLTKIAVD 426
>UNIPROTKB|E2RD30 [details] [associations]
symbol:SEMA6C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842
GeneTree:ENSGT00690000101956 CTD:10500 OMA:LVSCACR
InterPro:IPR015514 PANTHER:PTHR11036:SF9 EMBL:AAEX03011056
RefSeq:XP_540309.3 Ensembl:ENSCAFT00000019817 GeneID:483191
KEGG:cfa:483191 Uniprot:E2RD30
Length = 963
Score = 459 (166.6 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 98/216 (45%), Positives = 130/216 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 215 KYDSKWLREPYFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 274
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + P D +GVFTT T + GSA+C+
Sbjct: 275 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTG-PVDFYGHPALFGVFTTQTNSIPGSAVCA 333
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV RVP PRPG C + LPD VL
Sbjct: 334 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVL 393
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T L VD
Sbjct: 394 TFIKAHPLLDPAVPPATHQPLLTLTSRALLTQLAVD 429
>ZFIN|ZDB-GENE-050417-171 [details] [associations]
symbol:sema6dl "sema domain, transmembrane domain
(TM), and cytoplasmic domain, (semaphorin) 6D, like" species:7955
"Danio rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-050417-171
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
EMBL:BX323575 IPI:IPI00859285 Ensembl:ENSDART00000098788
Bgee:F1QG92 Uniprot:F1QG92
Length = 1072
Score = 460 (167.0 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 103/258 (39%), Positives = 148/258 (57%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILS 85
+YD+ +P F+ + D G +V+FFFRE A E+ N GK+V+SRVAR+CK D GG + +L
Sbjct: 214 KYDSKWLKEPHFLHAVDYGDFVYFFFREIAAEHNNLGKAVYSRVARICKNDMGGSQRVLE 273
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W +++KARLNCS+PGE FYF+ +Q DI + G + GVFTT + GSA+C+
Sbjct: 274 KHWTSFVKARLNCSVPGESFFYFDVLQAITDIIDINGVPS-VVGVFTTQLNSIPGSAVCA 332
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--DTET------LPDSVL 194
FS+ DIE+AF G+FKEQ T S W P ++P+PRPG C E+ PD L
Sbjct: 333 FSMVDIEKAFRGRFKEQKTPDSVWTPFPEEKLPKPRPGCCAGHGSAESYKTSIEFPDETL 392
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRT 254
FI+SHPLMD +V ++P F + + L V G Y V F +
Sbjct: 393 QFIKSHPLMDASVPSIGDEPWFTKTRVSRYRLTALAVD-NTAGPHKNYTVVFIGSEA--G 449
Query: 255 VFVKVRLLQDVSNTSDSI 272
+ +KV + +DS+
Sbjct: 450 IVLKVLAKTSPLSLNDSV 467
>MGI|MGI:1338032 [details] [associations]
symbol:Sema6c "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6C" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IPI]
InterPro:IPR001627 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS51004 SMART:SM00630 MGI:MGI:1338032
GO:GO:0016021 GO:GO:0005886 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOGENOM:HOG000232047
HOVERGEN:HBG072910 GeneTree:ENSGT00690000101956 CTD:10500
InterPro:IPR015514 PANTHER:PTHR11036:SF9 EMBL:AB013729
IPI:IPI00123555 RefSeq:NP_035481.1 UniGene:Mm.23662
ProteinModelPortal:Q9WTM3 SMR:Q9WTM3 STRING:Q9WTM3
PhosphoSite:Q9WTM3 PRIDE:Q9WTM3 Ensembl:ENSMUST00000090821
Ensembl:ENSMUST00000168321 GeneID:20360 KEGG:mmu:20360
UCSC:uc008qij.1 NextBio:298245 Bgee:Q9WTM3 Genevestigator:Q9WTM3
GermOnline:ENSMUSG00000038777 Uniprot:Q9WTM3
Length = 931
Score = 458 (166.3 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 96/216 (44%), Positives = 133/216 (61%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G++V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 216 KYDSKWLREPHFVYALEHGEHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 275
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 276 RHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALF-GVFTTQTNSIPGSAVCA 334
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL
Sbjct: 335 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAASFSSSQDLPDDVL 394
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 395 LFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 430
>UNIPROTKB|F1SSX9 [details] [associations]
symbol:SEMA6C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030215 "semaphorin receptor binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
OMA:LVSCACR InterPro:IPR015514 PANTHER:PTHR11036:SF9 EMBL:CU138569
Ensembl:ENSSSCT00000007271 Uniprot:F1SSX9
Length = 935
Score = 457 (165.9 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 97/216 (44%), Positives = 130/216 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 215 KYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 274
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 275 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLYGRSALF-GVFTTQTNSIPGSAVCA 333
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV RVP PRPG C + LPD VL
Sbjct: 334 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVL 393
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 394 TFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 429
>UNIPROTKB|E1BG65 [details] [associations]
symbol:SEMA6C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030215 "semaphorin receptor binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
OMA:LVSCACR InterPro:IPR015514 PANTHER:PTHR11036:SF9
EMBL:DAAA02007252 IPI:IPI00713977 Ensembl:ENSBTAT00000009575
Uniprot:E1BG65
Length = 958
Score = 457 (165.9 bits), Expect = 2.8e-42, P = 2.8e-42
Identities = 97/216 (44%), Positives = 130/216 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 214 KYDSKWLREPHFVHALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 273
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 274 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLYGRSALF-GVFTTQTNSIPGSAVCA 332
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVN--------DTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV RVP PRPG C + LPD VL
Sbjct: 333 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGVAALFPSSRDLPDDVL 392
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 393 TFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>RGD|1308650 [details] [associations]
symbol:Sema5a "sema domain, seven thrombospondin repeats (type 1
and type 1-like), transmembrane domain (TM) and short cytoplasmic
domain, (semaphorin) 5A" species:10116 "Rattus norvegicus"
[GO:0001569 "patterning of blood vessels" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0008046 "axon guidance receptor
activity" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA;ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 RGD:1308650 GO:GO:0016021 Gene3D:2.130.10.10
GO:GO:0001569 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423
GO:GO:0008046 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 CTD:9037 KO:K06841
OMA:DSNFIPE OrthoDB:EOG4PG603 EMBL:CH473992 IPI:IPI00366903
RefSeq:NP_001101129.1 UniGene:Rn.14619 ProteinModelPortal:D3ZTD8
Ensembl:ENSRNOT00000016506 GeneID:310207 KEGG:rno:310207
UCSC:RGD:1308650 NextBio:661717 Uniprot:D3ZTD8
Length = 1074
Score = 458 (166.3 bits), Expect = 2.9e-42, P = 2.9e-42
Identities = 118/296 (39%), Positives = 158/296 (53%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLPY-----PNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+H+ VDVVQ T +I+Y A T T+ KVR
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---DTLVHIIYLA--TDYGTI-KKVRAPLSQ 438
Query: 266 SNTSDSICESSV--GRLKQTVTWGQSVHLSC--FVKLPASMANQPMSWYHYSKDKG 317
S+ S + E + R + + + +H FV L + P+ H+ + +G
Sbjct: 439 SSGSCLLEEIELFPERKSEPIRSLKILHSQSVLFVGLQEHVVKIPLKRCHFHQTRG 494
>RGD|3659 [details] [associations]
symbol:Sema6c "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6C" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007411 "axon guidance" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030215
"semaphorin receptor binding" evidence=IEA;ISO] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 RGD:3659 GO:GO:0016021 GO:GO:0005886 GO:GO:0007411
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06842 HOGENOM:HOG000232047 HOVERGEN:HBG072910
GeneTree:ENSGT00690000101956 CTD:10500 OMA:LVSCACR OrthoDB:EOG4320XF
InterPro:IPR015514 PANTHER:PTHR11036:SF9 EMBL:AB000817 EMBL:AB014074
IPI:IPI00203121 IPI:IPI00230803 RefSeq:NP_059004.1 UniGene:Rn.22449
ProteinModelPortal:Q9WTL3 STRING:Q9WTL3 PhosphoSite:Q9WTL3
Ensembl:ENSRNOT00000028645 Ensembl:ENSRNOT00000050914 GeneID:29744
KEGG:rno:29744 UCSC:RGD:3659 InParanoid:Q9WTL3 NextBio:610256
ArrayExpress:Q9WTL3 Genevestigator:Q9WTL3
GermOnline:ENSRNOG00000021101 Uniprot:Q9WTL3
Length = 960
Score = 456 (165.6 bits), Expect = 3.6e-42, P = 3.6e-42
Identities = 96/216 (44%), Positives = 132/216 (61%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 214 KYDSKWLREPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 273
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 274 RHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALF-GVFTTQTNSIPGSAVCA 332
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL
Sbjct: 333 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVL 392
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 393 LFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>UNIPROTKB|Q9WTL3 [details] [associations]
symbol:Sema6c "Semaphorin-6C" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 RGD:3659 GO:GO:0016021 GO:GO:0005886 GO:GO:0007411
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOGENOM:HOG000232047
HOVERGEN:HBG072910 GeneTree:ENSGT00690000101956 CTD:10500
OMA:LVSCACR OrthoDB:EOG4320XF InterPro:IPR015514
PANTHER:PTHR11036:SF9 EMBL:AB000817 EMBL:AB014074 IPI:IPI00203121
IPI:IPI00230803 RefSeq:NP_059004.1 UniGene:Rn.22449
ProteinModelPortal:Q9WTL3 STRING:Q9WTL3 PhosphoSite:Q9WTL3
Ensembl:ENSRNOT00000028645 Ensembl:ENSRNOT00000050914 GeneID:29744
KEGG:rno:29744 UCSC:RGD:3659 InParanoid:Q9WTL3 NextBio:610256
ArrayExpress:Q9WTL3 Genevestigator:Q9WTL3
GermOnline:ENSRNOG00000021101 Uniprot:Q9WTL3
Length = 960
Score = 456 (165.6 bits), Expect = 3.6e-42, P = 3.6e-42
Identities = 96/216 (44%), Positives = 132/216 (61%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 214 KYDSKWLREPHFVYALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 273
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 274 RHWTSFLKLRLNCSVPGDSTFYFDVLQSLTGPVNLHGRSALF-GVFTTQTNSIPGSAVCA 332
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVL 194
F ++DIER F GKFKEQ + AW PV +VP PRPG C + ++ LPD VL
Sbjct: 333 FYLDDIERGFEGKFKEQRSLDGAWTPVSEDKVPSPRPGSCAGVGAAALFSSSQDLPDDVL 392
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 393 LFIKAHPLLDPAVPPATHQPLLTLTSRALLTQVAVD 428
>MGI|MGI:107556 [details] [associations]
symbol:Sema5a "sema domain, seven thrombospondin repeats
(type 1 and type 1-like), transmembrane domain (TM) and short
cytoplasmic domain, (semaphorin) 5A" species:10090 "Mus musculus"
[GO:0001569 "patterning of blood vessels" evidence=IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IDA;IMP]
[GO:0008046 "axon guidance receptor activity" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 MGI:MGI:107556 GO:GO:0016021
Gene3D:2.130.10.10 GO:GO:0001569 InterPro:IPR000884 Pfam:PF00090
SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR003659
SMART:SM00423 GO:GO:0008046 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 eggNOG:NOG316291
HOGENOM:HOG000047106 HOVERGEN:HBG062356 OrthoDB:EOG4PG603
EMBL:X97817 IPI:IPI00816983 UniGene:Mm.260374
ProteinModelPortal:Q62217 SMR:Q62217 STRING:Q62217
PhosphoSite:Q62217 PRIDE:Q62217 InParanoid:Q62217
Genevestigator:Q62217 GermOnline:ENSMUSG00000022231 Uniprot:Q62217
Length = 1077
Score = 456 (165.6 bits), Expect = 4.8e-42, P = 4.8e-42
Identities = 119/295 (40%), Positives = 157/295 (53%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRPARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYGIFTTNVNSIASSAVCVFNLSAISQAFNG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLPY-----PNPNPNFQCGTMDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDV 265
V P F + F+HL VDVVQ T +I+Y T T+ KVR
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHLAVDVVQGR---ETLVHIIYLG--TDYGTI-KKVRAPLSQ 438
Query: 266 SNTSDSICESSV--GRLKQTVTWGQSVHLSC--FVKLPASMANQPMSWYHYSKDK 316
S+ S + E + R + + Q +H FV L +A P+ H+ + +
Sbjct: 439 SSGSCLLEEIELFPERRSEPIRSLQILHSQSVLFVGLQEHVAKIPLKRCHFHQTR 493
>UNIPROTKB|F1MTB6 [details] [associations]
symbol:SEMA5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 OMA:DSPRPRC EMBL:DAAA02001608
IPI:IPI00711295 Ensembl:ENSBTAT00000024989 Uniprot:F1MTB6
Length = 1096
Score = 455 (165.2 bits), Expect = 6.5e-42, P = 6.5e-42
Identities = 101/233 (43%), Positives = 141/233 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 228 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 286
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 287 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 345
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC-----VNDTETLPDSVLNFIRSHPLMDEAVAH 209
F+ Q +AWLP+ + P P QC V E L + L + LM EAV
Sbjct: 346 PFRYQENPRAAWLPIAN---PIPNFQQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQP 402
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +TT R++
Sbjct: 403 VTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTTSRSL 454
>UNIPROTKB|Q9H3T2 [details] [associations]
symbol:SEMA6C "Semaphorin-6C" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0005886 GO:GO:0007411
Gene3D:2.130.10.10 GO:GO:0004872 EMBL:CH471121 InterPro:IPR003659
SMART:SM00423 EMBL:AL592424 SUPFAM:SSF103575 SUPFAM:SSF101912
eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842
HOVERGEN:HBG072910 EMBL:AF339152 EMBL:AF339153 EMBL:AF339154
EMBL:AB022434 EMBL:AB058772 IPI:IPI00023643 IPI:IPI00218450
IPI:IPI00218451 RefSeq:NP_001171532.1 RefSeq:NP_001171533.1
RefSeq:NP_112175.2 UniGene:Hs.516316 ProteinModelPortal:Q9H3T2
SMR:Q9H3T2 STRING:Q9H3T2 PhosphoSite:Q9H3T2 DMDM:20532413
PRIDE:Q9H3T2 Ensembl:ENST00000341697 Ensembl:ENST00000368912
Ensembl:ENST00000368913 Ensembl:ENST00000368914 GeneID:10500
KEGG:hsa:10500 UCSC:uc001ewu.3 UCSC:uc001ewv.3 UCSC:uc001eww.3
CTD:10500 GeneCards:GC01M151104 HGNC:HGNC:10740 MIM:609294
neXtProt:NX_Q9H3T2 PharmGKB:PA35662 OMA:LVSCACR OrthoDB:EOG4320XF
GenomeRNAi:10500 NextBio:39844 ArrayExpress:Q9H3T2 Bgee:Q9H3T2
CleanEx:HS_SEMA6C Genevestigator:Q9H3T2 GermOnline:ENSG00000143434
InterPro:IPR015514 PANTHER:PTHR11036:SF9 Uniprot:Q9H3T2
Length = 930
Score = 453 (164.5 bits), Expect = 6.9e-42, P = 6.9e-42
Identities = 96/216 (44%), Positives = 131/216 (60%)
Query: 29 RYDN--CLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILS 85
+YD+ +P FV + + G +V+FFFRE +VE G+ FSRVARVCKRD GG L
Sbjct: 215 KYDSKWLREPHFVQALEHGDHVYFFFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALD 274
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDI---YKVPGDDTKFYGVFTTSTTGLMGSAICS 142
++W ++LK RLNCS+PG+ FYF+ +Q + + G F GVFTT T + GSA+C+
Sbjct: 275 RHWTSFLKLRLNCSVPGDSTFYFDVLQALTGPVNLHGRSALF-GVFTTQTNSIPGSAVCA 333
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV--------NDTETLPDSVL 194
F +++IER F GKFKEQ + AW PV RVP PRPG C + + LPD VL
Sbjct: 334 FYLDEIERGFEGKFKEQRSLDGAWTPVSEDRVPSPRPGSCAGVGGAALFSSSRDLPDDVL 393
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD-LLFTHLVVD 229
FI++HPL+D AV ++P+ L T + VD
Sbjct: 394 TFIKAHPLLDPAVPPVTHQPLLTLTSRALLTQVAVD 429
>UNIPROTKB|F1ML13 [details] [associations]
symbol:SEMA5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008046 "axon guidance receptor activity" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0001569
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 GO:GO:0008046
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 OMA:DSNFIPE
EMBL:DAAA02051238 EMBL:DAAA02051239 EMBL:DAAA02051240
EMBL:DAAA02051241 EMBL:DAAA02051242 EMBL:DAAA02051243
EMBL:DAAA02051244 EMBL:DAAA02051245 EMBL:DAAA02051246
EMBL:DAAA02051247 EMBL:DAAA02051248 IPI:IPI01002133
Ensembl:ENSBTAT00000006610 Uniprot:F1ML13
Length = 977
Score = 442 (160.7 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
Identities = 97/207 (46%), Positives = 122/207 (58%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 106 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 164
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY++E+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 165 RLNCSRPGEVPFYYHELQGTFFLPELDL-IYGIFTTNVNSIAASAVCIFNLSAISQAFNG 223
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 224 PFKYQENSRSAWLPY-----PNPNPNFQCGTVDQGVYVNLTERNLQDAQKFI----LMHE 274
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
V P F F+H+ VDVVQ
Sbjct: 275 VVQPVSPVPAFMEDSSRFSHVAVDVVQ 301
Score = 38 (18.4 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
Identities = 8/18 (44%), Positives = 9/18 (50%)
Query: 352 WLGNTVLC-THNLTVDAH 368
W + C NLTVD H
Sbjct: 415 WEQSIATCPVRNLTVDGH 432
>UNIPROTKB|F1PAQ1 [details] [associations]
symbol:SEMA5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 OMA:DSPRPRC EMBL:AAEX03017031
EMBL:AAEX03017032 EMBL:AAEX03017033 Ensembl:ENSCAFT00000019107
Uniprot:F1PAQ1
Length = 1151
Score = 454 (164.9 bits), Expect = 9.2e-42, P = 9.2e-42
Identities = 99/230 (43%), Positives = 142/230 (61%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 285 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 343
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 344 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 402
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G V E L + L + LM EAV
Sbjct: 403 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQPVTP 461
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +TT R++
Sbjct: 462 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTTSRSL 510
>UNIPROTKB|Q13591 [details] [associations]
symbol:SEMA5A "Semaphorin-5A" species:9606 "Homo sapiens"
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0008046
"axon guidance receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 Gene3D:2.130.10.10
GO:GO:0007155 GO:GO:0007267 GO:GO:0001569 EMBL:CH471102
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 Orphanet:281
GO:GO:0008046 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 EMBL:U52840 EMBL:AC004615 EMBL:AC022446
EMBL:AC027336 EMBL:AC091906 EMBL:BC115696 IPI:IPI00013880
PIR:JC5928 RefSeq:NP_003957.2 UniGene:Hs.27621
ProteinModelPortal:Q13591 SMR:Q13591 IntAct:Q13591 STRING:Q13591
PhosphoSite:Q13591 DMDM:109939725 PRIDE:Q13591
Ensembl:ENST00000382496 GeneID:9037 KEGG:hsa:9037 UCSC:uc003jek.2
CTD:9037 GeneCards:GC05M009036 HGNC:HGNC:10736 HPA:HPA004632
MIM:609297 neXtProt:NX_Q13591 PharmGKB:PA35658 eggNOG:NOG316291
HOGENOM:HOG000047106 HOVERGEN:HBG062356 InParanoid:Q13591 KO:K06841
OMA:DSNFIPE OrthoDB:EOG4PG603 PhylomeDB:Q13591 GenomeRNAi:9037
NextBio:33851 ArrayExpress:Q13591 Bgee:Q13591 CleanEx:HS_SEMA5A
Genevestigator:Q13591 GermOnline:ENSG00000112902 Uniprot:Q13591
Length = 1074
Score = 453 (164.5 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 132/352 (37%), Positives = 174/352 (49%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 275 RLNCSRPGEVPFYYNELQSTFFLPELDL-IYGIFTTNVNSIAASAVCVFNLSAIAQAFSG 333
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI LM E
Sbjct: 334 PFKYQENSRSAWLPY-----PNPNPHFQCGTVDQGLYVNLTERNLQDAQKFI----LMHE 384
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVF-VKVRLLQD 264
V P F + F+H+ VDVVQ +I+Y A T T+ V+V L Q
Sbjct: 385 VVQPVTTVPSFMEDNSRFSHVAVDVVQGR---EALVHIIYLA--TDYGTIKKVRVPLNQT 439
Query: 265 VSNTSDSICESSVGRLKQTVTWGQSVHLSC--FVKLPASMANQPMSWYHYSKDKGRYQIK 322
S+ E R ++ + Q +H FV L + P+ + + R
Sbjct: 440 SSSCLLEEIELFPERRREPIRSLQILHSQSVLFVGLREHVVKIPLKRCQFYRT--RSTCI 497
Query: 323 FRSDKFIRTVDGGLVIMA-VEELDAG-KYDCWLGNTVLC-THNLTVDAHSNV 371
D + G V+M L+ W + C T NLTVD H V
Sbjct: 498 GAQDPYC----GWDVVMKKCTSLEESLSMTQWEQSISACPTRNLTVDGHFGV 545
>UNIPROTKB|F1PBV7 [details] [associations]
symbol:SEMA5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 CTD:9037 KO:K06841 OMA:DSNFIPE
EMBL:AAEX03017160 EMBL:AAEX03017161 EMBL:AAEX03017162
RefSeq:XP_848441.3 Ensembl:ENSCAFT00000016056 GeneID:478622
KEGG:cfa:478622 Uniprot:F1PBV7
Length = 1073
Score = 443 (161.0 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 97/218 (44%), Positives = 127/218 (58%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + + D YG+FTT+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQSTFFLAELDL-IYGIFTTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QCVNDTE----TLPDSVLNFIRSHPLMDEAVAH 209
FK Q S SAWLP P P P QC + L + L + LM E V
Sbjct: 333 PFKYQENSRSAWLPY-----PNPNPNFQCGTVDQGLYMNLTERNLQDAQKFILMHEVVQP 387
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFA 247
+ P F F H+VVDVVQ T +++Y A
Sbjct: 388 VTSVPSFMEDSSRFFHMVVDVVQGR---DTLIHVIYLA 422
Score = 37 (18.1 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 352 WLGNTVLCT-HNLTVDAH 368
W T C NLTVD H
Sbjct: 524 WEQITSTCPIRNLTVDGH 541
>UNIPROTKB|F1SQ38 [details] [associations]
symbol:SEMA5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 OMA:DSPRPRC EMBL:CU633639
Ensembl:ENSSSCT00000012986 Uniprot:F1SQ38
Length = 997
Score = 450 (163.5 bits), Expect = 1.8e-41, P = 1.8e-41
Identities = 98/230 (42%), Positives = 142/230 (61%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 131 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 189
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 190 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 248
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G V E L + L + LM EAV
Sbjct: 249 PFRYQENPRAAWLPI-ANPIPNFQCGTLPEVGPNENLTERSLQDAQRLFLMSEAVQPVTP 307
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +TT R++
Sbjct: 308 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTTSRSL 356
>UNIPROTKB|F1NSD7 [details] [associations]
symbol:SEMA5B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 OMA:DSPRPRC EMBL:AADN02016878
IPI:IPI00581623 ProteinModelPortal:F1NSD7
Ensembl:ENSGALT00000019105 Uniprot:F1NSD7
Length = 991
Score = 449 (163.1 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 99/242 (40%), Positives = 149/242 (61%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+F+ +YDIG + +FFFRE AVE+ +CGK+V+SRVARVCK D GG+ +L W T++KA
Sbjct: 125 EPNFIAAYDIGLFTYFFFRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKA 183
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 184 RLNCSRAGEIPFYYNELQSTFYLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAITQAFNG 242
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--ETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q SAWLP ++ +P + G +D+ E L + VL + LM++ V
Sbjct: 243 PFRYQENPRSAWLPT-ANPIPNFQCGTLSDDSPNENLTERVLQDAQRLFLMNDVVQPVTV 301
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVFGTTSEY-IVYFAATTT---LRTVFVK-VRLL 262
P + + F+ LVVD+VQ Y V +EY + A +TT LR+ +++ +++L
Sbjct: 302 DPYVTQDSIRFSKLVVDIVQGKDTLYHVMYIGTEYGTILKALSTTNRSLRSCYLEEMQIL 361
Query: 263 QD 264
D
Sbjct: 362 PD 363
>UNIPROTKB|F1S0T6 [details] [associations]
symbol:SEMA5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008046 "axon guidance receptor activity" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA]
InterPro:IPR001627 InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0001569
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 GO:GO:0008046 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 OMA:DSNFIPE
EMBL:CU915475 EMBL:CU928060 EMBL:FP085582
Ensembl:ENSSSCT00000018613 Uniprot:F1S0T6
Length = 1077
Score = 437 (158.9 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 95/207 (45%), Positives = 122/207 (58%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVCK D GG+ +L W T++KA
Sbjct: 215 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDLGGRFLLEDTWTTFMKA 273
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D Y VF+T+ + SA+C F++ I +AF G
Sbjct: 274 RLNCSRPGEVPFYYNELQGTFFLPELDL-IYAVFSTNVNSIAASAVCVFNLSAISQAFNG 332
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI H ++
Sbjct: 333 PFKYQENSRSAWLPY-----PNPNPNFQCGTVDQGLYVNLTERNLQDAQKFILMHEVVQP 387
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
A P F + F+H+ VDVVQ
Sbjct: 388 VTA----VPSFMEDNSRFSHVAVDVVQ 410
Score = 38 (18.4 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 352 WLGNTVLCTHNLT 364
W+ ++ C H++T
Sbjct: 506 WISSSAKCVHSIT 518
>UNIPROTKB|E1BIT8 [details] [associations]
symbol:SEMA6B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030215 "semaphorin receptor binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
OMA:KRLPTPH EMBL:DAAA02019604 EMBL:DAAA02019605 IPI:IPI00730232
Ensembl:ENSBTAT00000003619 Uniprot:E1BIT8
Length = 784
Score = 423 (154.0 bits), Expect = 5.3e-41, Sum P(2) = 5.3e-41
Identities = 87/207 (42%), Positives = 122/207 (58%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLL--FTHLVVDV 230
AV + P R + T + VDV
Sbjct: 408 AVPSLGHAPWIVRTLMRHQLTRVAVDV 434
Score = 44 (20.5 bits), Expect = 5.3e-41, Sum P(2) = 5.3e-41
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 263 QDVSNTSDSICESSVGRLKQTVTWGQ----SVHL------SCFVKLPASMANQPMSWYHY 312
QDVS TS S G L+ +++ + SV+L + FV + A ++ + WY
Sbjct: 565 QDVSGTSTSGLGDCTGLLRASLSEERAGLVSVNLLVTSSVAAFV-VGAVVSGFSVGWYVG 623
Query: 313 SKDKGRYQIKFRSDK-FIRTVDGGLVIMAVEEL 344
++ R ++ R DK I GG +++V L
Sbjct: 624 LRE--RRELARRKDKEAILAHGGGEAVLSVSRL 654
>ZFIN|ZDB-GENE-040724-23 [details] [associations]
symbol:si:ch211-168n16.1 "si:ch211-168n16.1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-040724-23 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101956 EMBL:CT027824
EMBL:CT583662 IPI:IPI00962380 Ensembl:ENSDART00000053204
Uniprot:F1QI04
Length = 872
Score = 444 (161.4 bits), Expect = 5.3e-41, P = 5.3e-41
Identities = 95/225 (42%), Positives = 135/225 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K + SRVARVCK D GG + +L + W ++LK
Sbjct: 219 EPYFVSAVEWGPHIYFFFREMAMEFNYLEKVMVSRVARVCKGDLGGSQRVLERQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCSIPG+ FYFN +Q I ++ G D GVF+T + + GSA+C+F ++ + R
Sbjct: 279 ARLNCSIPGDSHFYFNLLQSTSPIIRMQGRDV-ILGVFSTPSNSIPGSAVCAFDMQQLAR 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV VP PRPG C + + TLPD VLNFI+ HPLMD
Sbjct: 338 VFEGRFKEQKSPESIWTPVPDELVPRPRPGGCAVQGSRFSTSNTLPDEVLNFIKIHPLMD 397
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
EAV ++P + + + L VV E + +V+ +T
Sbjct: 398 EAVPLLGHRPWIVKTMVRY-QLNTMVVDTEAGPHRNRTVVFLGST 441
>UNIPROTKB|B5ME80 [details] [associations]
symbol:SEMA5B "Semaphorin-5B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000047106 HOVERGEN:HBG062356 EMBL:AC078794 EMBL:AC083797
EMBL:AC109130 HGNC:HGNC:10737 IPI:IPI00790894
ProteinModelPortal:B5ME80 SMR:B5ME80 STRING:B5ME80
Ensembl:ENST00000393583 ArrayExpress:B5ME80 Bgee:B5ME80
Uniprot:B5ME80
Length = 1088
Score = 445 (161.7 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 97/230 (42%), Positives = 140/230 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G E L + L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTP 460
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 461 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 509
>UNIPROTKB|C9JKR3 [details] [associations]
symbol:SEMA5B "Semaphorin-5B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000047106 EMBL:AC078794 EMBL:AC083797 EMBL:AC109130
IPI:IPI00945133 HGNC:HGNC:10737 ProteinModelPortal:C9JKR3
SMR:C9JKR3 STRING:C9JKR3 Ensembl:ENST00000195173
ArrayExpress:C9JKR3 Bgee:C9JKR3 Uniprot:C9JKR3
Length = 1092
Score = 445 (161.7 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 97/230 (42%), Positives = 140/230 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G E L + L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTP 460
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 461 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 509
>UNIPROTKB|F8WAT5 [details] [associations]
symbol:SEMA5B "Semaphorin-5B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 EMBL:AC078794
EMBL:AC083797 EMBL:AC109130 IPI:IPI00945133 HGNC:HGNC:10737
ProteinModelPortal:F8WAT5 SMR:F8WAT5 Ensembl:ENST00000475244
ArrayExpress:F8WAT5 Bgee:F8WAT5 Uniprot:F8WAT5
Length = 1094
Score = 445 (161.7 bits), Expect = 7.6e-41, P = 7.6e-41
Identities = 97/230 (42%), Positives = 140/230 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G E L + L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTP 460
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 461 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 509
>UNIPROTKB|Q9P283 [details] [associations]
symbol:SEMA5B "Semaphorin-5B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 EMBL:CH471052 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
eggNOG:NOG316291 HOVERGEN:HBG062356 KO:K06841 EMBL:AB040878
EMBL:AY358124 EMBL:AK001234 EMBL:AK291407 EMBL:AK295619
EMBL:AC078794 EMBL:AC083797 EMBL:AC109130 EMBL:BC077726
IPI:IPI00395376 IPI:IPI00788999 IPI:IPI00945133 IPI:IPI01011436
RefSeq:NP_001026872.2 RefSeq:NP_001243275.1 RefSeq:NP_001243276.1
UniGene:Hs.210870 ProteinModelPortal:Q9P283 SMR:Q9P283
STRING:Q9P283 PhosphoSite:Q9P283 DMDM:212276522 PRIDE:Q9P283
Ensembl:ENST00000357599 Ensembl:ENST00000451055 GeneID:54437
KEGG:hsa:54437 UCSC:uc003efz.1 CTD:54437 GeneCards:GC03M122628
H-InvDB:HIX0020193 HGNC:HGNC:10737 HPA:HPA017084 MIM:609298
neXtProt:NX_Q9P283 PharmGKB:PA35659 InParanoid:Q9P283 OMA:DSPRPRC
OrthoDB:EOG4DJJVN GenomeRNAi:54437 NextBio:56654
ArrayExpress:Q9P283 Bgee:Q9P283 CleanEx:HS_SEMA5B
Genevestigator:Q9P283 GermOnline:ENSG00000082684 Uniprot:Q9P283
Length = 1151
Score = 445 (161.7 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 97/230 (42%), Positives = 140/230 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV +YDIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 284 EPNFVAAYDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 342
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 343 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISQAFNG 401
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G E L + L + LM EAV
Sbjct: 402 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTP 460
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 461 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 509
>ZFIN|ZDB-GENE-030131-8004 [details] [associations]
symbol:sema6a "sema domain, transmembrane domain
(TM), and cytoplasmic domain, (semaphorin) 6A" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-030131-8004
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 CTD:57556
HOGENOM:HOG000232047 HOVERGEN:HBG072910 EMBL:BC061707
IPI:IPI00498576 RefSeq:NP_956286.1 UniGene:Dr.116021
UniGene:Dr.81138 ProteinModelPortal:Q6P7E1 GeneID:336060
KEGG:dre:336060 eggNOG:NOG326484 NextBio:20811160 Uniprot:Q6P7E1
Length = 968
Score = 441 (160.3 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 90/209 (43%), Positives = 127/209 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + D +++FFFRE A+EY + GK VF RVARVCK D+GG + +L + W ++LK
Sbjct: 219 EPYFVQAVDYEDFIYFFFREIAMEYNSMGKVVFPRVARVCKSDSGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
RLNCSIPG+ FYFN +Q D+ + G D F+T + GSA+C++ + +I
Sbjct: 279 TRLNCSIPGDSHFYFNILQAVTDVIHISGRDVVM-ATFSTPYNSIPGSAVCAYDMSEIAL 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET--------LPDSVLNFIRSHPL 202
AF G+FKEQ + S W PV RVP+PRPG C + PD L+FI++HPL
Sbjct: 338 AFTGRFKEQKSPDSTWTPVPEERVPKPRPGVCAGSSSVEKFKVSSEFPDDSLSFIKAHPL 397
Query: 203 MDEAVAHRDNKPVFYRRDLLF--THLVVD 229
M+EAV N+P F + + + T + VD
Sbjct: 398 MEEAVPAIANRPWFLKTMVRYRLTRIAVD 426
>MGI|MGI:107555 [details] [associations]
symbol:Sema5b "sema domain, seven thrombospondin repeats
(type 1 and type 1-like), transmembrane domain (TM) and short
cytoplasmic domain, (semaphorin) 5B" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107555 GO:GO:0016021 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 EMBL:CH466521 InterPro:IPR000884
Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
eggNOG:NOG316291 HOGENOM:HOG000047106 HOVERGEN:HBG062356 KO:K06841
CTD:54437 OMA:DSPRPRC OrthoDB:EOG4DJJVN EMBL:X97818 EMBL:CT010576
EMBL:AC154653 EMBL:BC052397 EMBL:AK129362 EMBL:AK078659
IPI:IPI00459266 IPI:IPI00874372 IPI:IPI00890232 RefSeq:NP_038689.2
UniGene:Mm.42015 ProteinModelPortal:Q60519 SMR:Q60519
PhosphoSite:Q60519 PRIDE:Q60519 Ensembl:ENSMUST00000050625
Ensembl:ENSMUST00000120756 GeneID:20357 KEGG:mmu:20357
NextBio:298233 Bgee:Q60519 Genevestigator:Q60519
GermOnline:ENSMUSG00000052133 Uniprot:Q60519
Length = 1093
Score = 442 (160.7 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 96/230 (41%), Positives = 140/230 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGVFTT+ + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVFTTNVNSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
F+ Q +AWLP+ ++ +P + G E L + L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPI-ANPIPNFQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQPVTP 402
Query: 213 KPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 403 EPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 451
>UNIPROTKB|F6IB19 [details] [associations]
symbol:SEMA6B "Semaphorin-6B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 EMBL:AC011498 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
UniGene:Hs.465642 HGNC:HGNC:10739 EMBL:FR839673 IPI:IPI01022234
Ensembl:ENST00000586965 Bgee:F6IB19 Uniprot:F6IB19
Length = 677
Score = 431 (156.8 bits), Expect = 4.3e-40, P = 4.3e-40
Identities = 90/208 (43%), Positives = 125/208 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLL---FTHLVVDV 230
AV + P + R L+ T + VDV
Sbjct: 408 AVPSLGHAP-WILRTLMRHQLTRVAVDV 434
>MGI|MGI:107558 [details] [associations]
symbol:Sema3a "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3A" species:10090 "Mus
musculus" [GO:0002027 "regulation of heart rate" evidence=IMP]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISO;IDA;IMP]
[GO:0007413 "axonal fasciculation" evidence=IMP] [GO:0010633
"negative regulation of epithelial cell migration" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0030517 "negative regulation of axon
extension" evidence=ISO;IGI;IDA] [GO:0045499 "chemorepellent
activity" evidence=IDA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048841 "regulation of axon extension involved in
axon guidance" evidence=ISO;IDA] [GO:0048843 "negative regulation
of axon extension involved in axon guidance" evidence=IGI;IDA]
[GO:0050919 "negative chemotaxis" evidence=IGI;IDA] [GO:0060666
"dichotomous subdivision of terminal units involved in salivary
gland branching" evidence=IGI;IDA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107558 GO:GO:0006915 GO:GO:0007411 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0030424 GO:GO:0030425 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 Reactome:REACT_127416 GO:GO:0048813
GO:GO:0002027 GO:GO:0007413 InterPro:IPR003659 SMART:SM00423
GO:GO:0010633 GO:GO:0045499 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0060666 GO:GO:0048843 PDB:4GZA PDBsum:4GZA
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 eggNOG:NOG305380 CTD:10371
OMA:CTYIEVG EMBL:X85993 EMBL:D85028 EMBL:L41541 EMBL:AC022368
EMBL:AC109165 EMBL:AC121125 EMBL:AC121841 EMBL:AC159971
EMBL:BC057588 EMBL:BC090844 EMBL:L40484 IPI:IPI00309087 PIR:I48747
PIR:I58169 RefSeq:NP_001230001.1 RefSeq:NP_001230002.1
RefSeq:NP_033178.2 UniGene:Mm.372039 UniGene:Mm.483774 PDB:1Q47
PDB:4GZ8 PDBsum:1Q47 PDBsum:4GZ8 ProteinModelPortal:O08665
SMR:O08665 STRING:O08665 PhosphoSite:O08665 PRIDE:O08665
Ensembl:ENSMUST00000030714 Ensembl:ENSMUST00000095012 GeneID:20346
KEGG:mmu:20346 UCSC:uc008wmb.2 GeneTree:ENSGT00560000076660
InParanoid:O08665 EvolutionaryTrace:O08665 NextBio:298185
Bgee:O08665 Genevestigator:O08665 GermOnline:ENSMUSG00000028883
Uniprot:O08665
Length = 772
Score = 396 (144.5 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 90/235 (38%), Positives = 128/235 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
Score = 60 (26.2 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIM 339
L++ + +G + S F++ + W +++ R + D IRT + GL++
Sbjct: 581 LEERIIYGVE-NSSTFLECSPKSQRALVYWQFQRRNEDRKEEIRMGDHIIRT-EQGLLLR 638
Query: 340 AVEELDAGKYDC 351
++++ D+G Y C
Sbjct: 639 SLQKKDSGNYLC 650
>UNIPROTKB|E2RHV1 [details] [associations]
symbol:SEMA4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IEA] [GO:0030672 "synaptic vesicle membrane"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021535 "cell migration in hindbrain" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0030672 GO:GO:0021549 GO:GO:0001843 InterPro:IPR003659
SMART:SM00423 GO:GO:0032874 GO:GO:0021535 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06521 GeneTree:ENSGT00560000076864 CTD:54910 OMA:YNASHLY
EMBL:AAEX03007463 RefSeq:XP_538464.3 ProteinModelPortal:E2RHV1
Ensembl:ENSCAFT00000003749 GeneID:481343 KEGG:cfa:481343
NextBio:20856171 Uniprot:E2RHV1
Length = 833
Score = 412 (150.1 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 110/284 (38%), Positives = 154/284 (54%)
Query: 36 PDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ VGS+ D K V+FFF E AVEY + V +RVARVCK D GG L + W T+LK
Sbjct: 222 PESVGSFTGDDDK-VYFFFSERAVEYDCYAEQVVARVARVCKGDMGGARTLQRKWTTFLK 280
Query: 94 ARLNCSIPGEFPFYFNEIQDIY---KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C + +E+I+R
Sbjct: 281 ARLVCSAP-DWQLYFNQLQALHTLQEASWHNTTFFGVFRARWGDVDMSAVCEYQLEEIQR 339
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSVLNFIRSHP 201
F G +KE W + VP PRPG C+N+ T +L PD+ LNFI+ HP
Sbjct: 340 VFEGPYKEYREQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNTLNFIKKHP 398
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT---TLRTVFVK 258
LM+E V R N+P+ ++D FTHLV D V + G T Y V F T L+ V +
Sbjct: 399 LMEEQVGPRWNRPLLVKKDTNFTHLVADRVT-GLDGAT--YTVLFIGTGGGWLLKAVSLG 455
Query: 259 --VRLLQDVSNTSDSICESSV-GRLKQTVTWGQSVHLSCFVKLP 299
V L++++ ES V R K+ + G L V+LP
Sbjct: 456 SWVHLIEELQVFDQEPVESLVLSRSKKLLFAGSRSQL---VQLP 496
Score = 45 (20.9 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI-KFRSDKFIRTVDGGLVIMAV 341
TV G + L C +L +++A+ W +D Q F D ++ LV+MA
Sbjct: 566 TVVAGTDLVLPC--RLSSNLAHA--RWTFGGRDLPAEQPGSFLYDPRLQA----LVVMAA 617
Query: 342 EELDAGKYDCW 352
+ AG Y C+
Sbjct: 618 QPRHAGAYHCF 628
>RGD|1308914 [details] [associations]
symbol:Sema5b "sema domain, seven thrombospondin repeats (type 1
and type 1-like), transmembrane domain (TM) and short cytoplasmic
domain, (semaphorin) 5B" species:10116 "Rattus norvegicus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630 RGD:1308914
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR000884 Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895
PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 IPI:IPI00392065
Ensembl:ENSRNOT00000030074 UCSC:RGD:1308914 ArrayExpress:D4AEM7
Uniprot:D4AEM7
Length = 1069
Score = 434 (157.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 98/233 (42%), Positives = 140/233 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV ++DIG + +FF RE AVE+ +CG++V+SRVARVCK D GG+ +L W T++KA
Sbjct: 226 EPNFVAAFDIGLFAYFFLRENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKA 284
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PFY+NE+Q + +P D YGV TT + SA+C+F++ I +AF G
Sbjct: 285 RLNCSRPGEVPFYYNELQSAFHLPEQDL-IYGVSTTEANSIAASAVCAFNLSAISKAFNG 343
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDT---ETLPDSVLNFIRSHPLMDEAVAH 209
F+ Q +AWLP+ + P P QC + +T E L + L + LM EAV
Sbjct: 344 PFRYQENPRAAWLPIAN---PIPNFQQCGTLPETGPNENLTERSLQDAQRLFLMSEAVQP 400
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQ-----YEVF--GTTSEYIVYFAATTTLRTV 255
+P + + F+HLVVD+VQ Y V GT S I+ A +T R++
Sbjct: 401 VTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILK-ALSTASRSL 452
>MGI|MGI:1202889 [details] [associations]
symbol:Sema6b "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6B" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030215 "semaphorin receptor
binding" evidence=IPI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 EMBL:AF036585 MGI:MGI:1202889
GO:GO:0016021 GO:GO:0005886 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 eggNOG:NOG293968
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842 HOGENOM:HOG000232047
HOVERGEN:HBG072910 CTD:10501 OMA:KRLPTPH IPI:IPI00119931
RefSeq:NP_001123928.1 RefSeq:NP_038690.1 UniGene:Mm.8029
ProteinModelPortal:O54951 SMR:O54951 STRING:O54951
PhosphoSite:O54951 PaxDb:O54951 PRIDE:O54951
Ensembl:ENSMUST00000001256 Ensembl:ENSMUST00000167545 GeneID:20359
KEGG:mmu:20359 InParanoid:O54951 OrthoDB:EOG4GTKCC NextBio:298241
Bgee:O54951 Genevestigator:O54951 GermOnline:ENSMUSG00000001227
GermOnline:ENSMUSG00000073381 Uniprot:O54951
Length = 886
Score = 432 (157.1 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/207 (42%), Positives = 123/207 (59%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLL--FTHLVVDV 230
AV + P R + T + VDV
Sbjct: 409 AVPSLGHSPWIVRTLMRHQLTRVAVDV 435
>ZFIN|ZDB-GENE-030131-8969 [details] [associations]
symbol:sema5a "sema domain, seven thrombospondin
repeats (type 1 and type 1-like), transmembrane domain (TM) and
short cytoplasmic domain, (semaphorin) 5A" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0048675 "axon extension"
evidence=IGI;IMP] InterPro:IPR001627 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-030131-8969 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0004872 InterPro:IPR000884 Pfam:PF00090 SMART:SM00209
SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR003659 SMART:SM00423
GO:GO:0048675 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 EMBL:BX323037
EMBL:BX323577 EMBL:CR354550 EMBL:CT573359 IPI:IPI00489880
Ensembl:ENSDART00000081759 ArrayExpress:F1R9L1 Bgee:F1R9L1
Uniprot:F1R9L1
Length = 1078
Score = 434 (157.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 96/224 (42%), Positives = 129/224 (57%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P+FV SYDIG + +FFFRE AVE+ +CG++VFSR ARVCK D GG+ +L W T++KA
Sbjct: 224 EPNFVSSYDIGNFTYFFFRENAVEH-DCGRTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 282
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS PGE PF +NE+Q + +P + YG+FTT+ + SA+C+F++ I + F G
Sbjct: 283 RLNCSRPGEIPFNYNELQGTFFLPELEL-LYGIFTTNVNSIAASAVCAFNLSAITQVFSG 341
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--------VNDTETLPDSVLNFIRSHPLMDE 205
FK Q S SAWLP P P P QC VN TE FI H ++
Sbjct: 342 PFKYQENSRSAWLPY-----PNPNPDFQCGTIDFGSYVNLTERNLQDAQKFILMHEVVQP 396
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
V P F ++ F+H+ VDVVQ G Y + + AT
Sbjct: 397 VVP----VPYFMEDNVRFSHVAVDVVQ----GKDMLYHIIYLAT 432
>RGD|69278 [details] [associations]
symbol:Sema6b "sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6B" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA;ISO]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 RGD:69278 GO:GO:0016021 GO:GO:0005886 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06842 HOVERGEN:HBG072910 CTD:10501
EMBL:AB000776 IPI:IPI00195686 RefSeq:NP_445923.1 UniGene:Rn.87343
ProteinModelPortal:O70141 PhosphoSite:O70141 PRIDE:O70141
GeneID:84609 KEGG:rno:84609 NextBio:617260 Genevestigator:O70141
Uniprot:O70141
Length = 887
Score = 432 (157.1 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/207 (42%), Positives = 123/207 (59%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 229 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 288
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 289 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAV 348
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 349 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASNALPDEILNFVKTHPLMDE 408
Query: 206 AVAHRDNKPVFYRRDLL--FTHLVVDV 230
AV + P R + T + VDV
Sbjct: 409 AVPSLGHSPWIVRTLIRHQLTRVAVDV 435
>UNIPROTKB|Q14563 [details] [associations]
symbol:SEMA3A "Semaphorin-3A" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007413 "axonal fasciculation" evidence=IEA] [GO:0010633
"negative regulation of epithelial cell migration" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0060666 "dichotomous subdivision of
terminal units involved in salivary gland branching" evidence=IEA]
[GO:0048841 "regulation of axon extension involved in axon
guidance" evidence=IDA] [GO:0021772 "olfactory bulb development"
evidence=IMP] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0048880 "sensory
system development" evidence=TAS] [GO:0048485 "sympathetic nervous
system development" evidence=TAS] [GO:0045499 "chemorepellent
activity" evidence=TAS] [GO:0071526 "semaphorin-plexin signaling
pathway" evidence=TAS] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Reactome:REACT_111045 GO:GO:0006915
GO:GO:0007411 GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0030424 GO:GO:0030425
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0048813
GO:GO:0002027 GO:GO:0007413 GO:GO:0048485 InterPro:IPR003659
SMART:SM00423 GO:GO:0048841 GO:GO:0010633 Orphanet:478
GO:GO:0045499 GO:GO:0048880 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0060666 GO:GO:0048843 GO:GO:0071526 HOGENOM:HOG000039964
HOVERGEN:HBG055071 KO:K06840 OrthoDB:EOG4ZPDTM InterPro:IPR027231
PANTHER:PTHR11036 eggNOG:NOG305380 CTD:10371 EMBL:L26081
EMBL:AC004451 EMBL:AC004848 IPI:IPI00031510 PIR:D49423
RefSeq:NP_006071.1 UniGene:Hs.252451 ProteinModelPortal:Q14563
SMR:Q14563 DIP:DIP-5744N STRING:Q14563 PhosphoSite:Q14563
DMDM:8134674 PaxDb:Q14563 PRIDE:Q14563 Ensembl:ENST00000265362
Ensembl:ENST00000436949 Ensembl:ENST00000448879 GeneID:10371
KEGG:hsa:10371 UCSC:uc003uhz.3 GeneCards:GC07M083587
HGNC:HGNC:10723 HPA:HPA029447 MIM:603961 neXtProt:NX_Q14563
PharmGKB:PA35645 InParanoid:Q14563 OMA:CTYIEVG PhylomeDB:Q14563
ChiTaRS:SEMA3A GenomeRNAi:10371 NextBio:39311 ArrayExpress:Q14563
Bgee:Q14563 CleanEx:HS_SEMA3A Genevestigator:Q14563
GermOnline:ENSG00000075213 Uniprot:Q14563
Length = 771
Score = 392 (143.0 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 88/227 (38%), Positives = 126/227 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNFKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPMNNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 VIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSI 464
Score = 63 (27.2 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 245 YFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRL-KQTVTWGQSVHLSCFVKLPASMA 303
YF T RT +R +++ SD ++ G ++ + +G + S F++
Sbjct: 545 YFP-TAKRRTRRQDIRNGDPLTHCSDLHHDNHHGHSPEERIIYGVE-NSSTFLECSPKSQ 602
Query: 304 NQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+ W +++ R + + R D I D GL++ ++++ D+G Y C
Sbjct: 603 RALVYWQFQRRNEERKE-EIRVDDHIIRTDQGLLLRSLQQKDSGNYLC 649
>UNIPROTKB|Q9H3T3 [details] [associations]
symbol:SEMA6B "Semaphorin-6B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0005886 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 GO:GO:0004872 EMBL:CH471139
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036 KO:K06842
HOGENOM:HOG000232047 HOVERGEN:HBG072910 EMBL:AB022433 EMBL:AF216389
EMBL:AY358939 EMBL:BC142617 IPI:IPI00104792 IPI:IPI00295525
RefSeq:NP_115484.2 UniGene:Hs.465642 ProteinModelPortal:Q9H3T3
SMR:Q9H3T3 STRING:Q9H3T3 PhosphoSite:Q9H3T3 DMDM:116242786
PaxDb:Q9H3T3 PRIDE:Q9H3T3 Ensembl:ENST00000301293 GeneID:10501
KEGG:hsa:10501 UCSC:uc010dud.2 CTD:10501 GeneCards:GC19M004542
HGNC:HGNC:10739 MIM:608873 neXtProt:NX_Q9H3T3 PharmGKB:PA35661
InParanoid:Q9H3T3 OMA:KRLPTPH PhylomeDB:Q9H3T3 GenomeRNAi:10501
NextBio:39848 ArrayExpress:Q9H3T3 Bgee:Q9H3T3 CleanEx:HS_SEMA6B
Genevestigator:Q9H3T3 GermOnline:ENSG00000167680 Uniprot:Q9H3T3
Length = 888
Score = 431 (156.8 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 90/208 (43%), Positives = 125/208 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 228 EPYFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLK 287
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 288 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDLTQVAAV 347
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + LPD +LNF+++HPLMDE
Sbjct: 348 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDDILNFVKTHPLMDE 407
Query: 206 AVAHRDNKPVFYRRDLL---FTHLVVDV 230
AV + P + R L+ T + VDV
Sbjct: 408 AVPSLGHAP-WILRTLMRHQLTRVAVDV 434
>RGD|3657 [details] [associations]
symbol:Sema3a "sema domain, immunoglobulin domain (Ig), short basic
domain, secreted, (semaphorin) 3A" species:10116 "Rattus norvegicus"
[GO:0002027 "regulation of heart rate" evidence=IEA;ISO] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0007411 "axon guidance" evidence=ISO;IGI] [GO:0007413 "axonal
fasciculation" evidence=IEA;ISO] [GO:0010633 "negative regulation of
epithelial cell migration" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0021772 "olfactory bulb development"
evidence=ISO;ISS] [GO:0030424 "axon" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0030517 "negative regulation of axon
extension" evidence=ISO;IDA] [GO:0045499 "chemorepellent activity"
evidence=IEA;ISO] [GO:0048813 "dendrite morphogenesis"
evidence=IEA;ISO] [GO:0048841 "regulation of axon extension involved
in axon guidance" evidence=ISO] [GO:0048843 "negative regulation of
axon extension involved in axon guidance" evidence=IEA;ISO]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0060666
"dichotomous subdivision of terminal units involved in salivary gland
branching" evidence=IEA;ISO] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 RGD:3657 GO:GO:0006915 GO:GO:0007411
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0030424 GO:GO:0030425 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 GO:GO:0048813 GO:GO:0002027 GO:GO:0007413
InterPro:IPR003659 SMART:SM00423 GO:GO:0030517 GO:GO:0010633
GO:GO:0045499 SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0060666
GO:GO:0048843 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
OrthoDB:EOG4ZPDTM InterPro:IPR027231 PANTHER:PTHR11036
eggNOG:NOG305380 CTD:10371 OMA:CTYIEVG GeneTree:ENSGT00560000076660
EMBL:X95286 IPI:IPI00210066 RefSeq:NP_059006.1 UniGene:Rn.44410
ProteinModelPortal:Q63548 SMR:Q63548 STRING:Q63548 PRIDE:Q63548
Ensembl:ENSRNOT00000034692 GeneID:29751 KEGG:rno:29751
InParanoid:Q63548 NextBio:610281 Genevestigator:Q63548
GermOnline:ENSRNOG00000023337 Uniprot:Q63548
Length = 772
Score = 396 (144.5 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 90/235 (38%), Positives = 128/235 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V V D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSVPKETWHDL 472
Score = 58 (25.5 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIM 339
L++ + +G + S F++ + W +++ R + D IRT + GL++
Sbjct: 581 LEERIIYGVE-NSSTFLECSPKSQRALVYWQFQRRNEDRKEEIRVGDHIIRT-EQGLLLR 638
Query: 340 AVEELDAGKYDC 351
++++ D+G Y C
Sbjct: 639 SLQKKDSGNYLC 650
>UNIPROTKB|E2QX94 [details] [associations]
symbol:SEMA3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060666 "dichotomous subdivision of terminal
units involved in salivary gland branching" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IEA] [GO:0045499 "chemorepellent activity" evidence=IEA]
[GO:0010633 "negative regulation of epithelial cell migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0002027 "regulation
of heart rate" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0048813 GO:GO:0002027 GO:GO:0007413 InterPro:IPR003659
SMART:SM00423 GO:GO:0010633 GO:GO:0045499 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0060666 GO:GO:0048843 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 CTD:10371 OMA:CTYIEVG
GeneTree:ENSGT00560000076660 EMBL:AAEX03011288 RefSeq:XP_849675.1
ProteinModelPortal:E2QX94 Ensembl:ENSCAFT00000010060 GeneID:483386
KEGG:cfa:483386 NextBio:20857790 Uniprot:E2QX94
Length = 772
Score = 395 (144.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 89/235 (37%), Positives = 128/235 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 422 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDL 472
Score = 57 (25.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIM 339
L++ + +G + S F++ + W +++ R + + R D I + GL++
Sbjct: 581 LEERIIYGVE-NSSTFLECSPKSQRALVYWQFQRRNEERKE-EIRVDDHIIRTEQGLLLR 638
Query: 340 AVEELDAGKYDC 351
+++ D+G Y C
Sbjct: 639 SLQRKDSGNYLC 650
>UNIPROTKB|F1NVZ5 [details] [associations]
symbol:SEMA3A "Semaphorin-3A" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007413
"axonal fasciculation" evidence=IEA] [GO:0010633 "negative
regulation of epithelial cell migration" evidence=IEA] [GO:0045499
"chemorepellent activity" evidence=IEA] [GO:0048813 "dendrite
morphogenesis" evidence=IEA] [GO:0048843 "negative regulation of
axon extension involved in axon guidance" evidence=IEA] [GO:0060666
"dichotomous subdivision of terminal units involved in salivary
gland branching" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0002027
InterPro:IPR003659 SMART:SM00423 GO:GO:0010633 GO:GO:0045499
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 IPI:IPI00683211 OMA:CTYIEVG
GeneTree:ENSGT00560000076660 EMBL:AADN02055642 EMBL:AADN02055643
EMBL:AADN02055644 EMBL:AADN02055645 EMBL:AADN02055646
EMBL:AADN02055647 EMBL:AADN02055648 EMBL:AADN02055649
EMBL:AADN02055650 EMBL:AADN02055651 EMBL:AADN02055652
EMBL:AADN02055653 EMBL:AADN02055654 EMBL:AADN02055655
EMBL:AADN02055656 EMBL:AADN02055657 Ensembl:ENSGALT00000010591
Uniprot:F1NVZ5
Length = 772
Score = 387 (141.3 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 86/227 (37%), Positives = 126/227 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +++P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINSRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 464
Score = 64 (27.6 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 245 YFAATTTLRTVFVKVRLLQDVSNTSD-SICESSVGR-LKQTVTWGQSVHLSCFVKLPASM 302
YF T RT +R +++ SD ++ G+ L++ + +G + S F++
Sbjct: 545 YFP-TAKRRTRRQDIRNGDPLTHCSDLQHHDNPSGQTLEEKIIYGVE-NSSTFLECSPKS 602
Query: 303 ANQPMSW-YHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+ W + D + +IK D+ IRT + GL++ +++ D+G Y C
Sbjct: 603 QRAIVYWQFQKQNDDHKVEIKV-DDRMIRT-EQGLLLRSLQRRDSGIYFC 650
>UNIPROTKB|Q90607 [details] [associations]
symbol:SEMA3A "Semaphorin-3A" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=TAS] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0005576 GO:GO:0007399
GO:GO:0030154 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
Reactome:REACT_127416 Reactome:REACT_115433 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840 OrthoDB:EOG4ZPDTM
InterPro:IPR027231 PANTHER:PTHR11036 eggNOG:NOG305380 EMBL:U02528
IPI:IPI00683211 PIR:A49069 RefSeq:NP_990308.2 UniGene:Gga.487
ProteinModelPortal:Q90607 SMR:Q90607 STRING:Q90607 GeneID:395825
KEGG:gga:395825 CTD:10371 InParanoid:Q90607 NextBio:20815893
Uniprot:Q90607
Length = 772
Score = 387 (141.3 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 86/227 (37%), Positives = 126/227 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 243 IYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 303 THFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCMYSMTDVRRVFLGPYAHRDGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +++P+
Sbjct: 363 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDEVITFARSHPAMYNPVFPINSRPI 421
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V E +Y V F T T L+ V +
Sbjct: 422 MIKTDVDYQFTQIVVDRVDAE----DGQYDVMFIGTDIGTVLKVVSI 464
Score = 64 (27.6 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 245 YFAATTTLRTVFVKVRLLQDVSNTSD-SICESSVGR-LKQTVTWGQSVHLSCFVKLPASM 302
YF T RT +R +++ SD ++ G+ L++ + +G + S F++
Sbjct: 545 YFP-TAKRRTRRQDIRNGDPLTHCSDLQHHDNPSGQTLEEKIIYGVE-NSSTFLECSPKS 602
Query: 303 ANQPMSW-YHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+ W + D + +IK D+ IRT + GL++ +++ D+G Y C
Sbjct: 603 QRAIVYWQFQKQNDDHKVEIKV-DDRMIRT-EQGLLLRSLQRRDSGIYFC 650
>MGI|MGI:1860118 [details] [associations]
symbol:Sema3d "sema domain, immunoglobulin domain (Ig),
short basic domain, secreted, (semaphorin) 3D" species:10090 "Mus
musculus" [GO:0004872 "receptor activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
MGI:MGI:1860118 GO:GO:0005576 GO:GO:0007399 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 HOGENOM:HOG000039964
HOVERGEN:HBG055071 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076660 CTD:223117 eggNOG:NOG247995
OMA:ERVELCK OrthoDB:EOG4SQWW5 EMBL:AK028900 EMBL:AK052671
IPI:IPI00221711 RefSeq:NP_083158.3 UniGene:Mm.89313
ProteinModelPortal:Q8BH34 SMR:Q8BH34 STRING:Q8BH34
PhosphoSite:Q8BH34 PRIDE:Q8BH34 Ensembl:ENSMUST00000030868
GeneID:108151 KEGG:mmu:108151 UCSC:uc008wlx.2 InParanoid:Q8BH34
NextBio:360170 Bgee:Q8BH34 Genevestigator:Q8BH34
GermOnline:ENSMUSG00000040254 Uniprot:Q8BH34
Length = 777
Score = 379 (138.5 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 91/242 (37%), Positives = 130/242 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E +S+ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 THFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FIR HP+M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIRRHPVMYKSVYPVAGAP 438
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V E +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVDHVVAE----DGQYDVMFLGTD-IGTVLKVVSISKEKWNMEEVV 493
Query: 273 CE 274
E
Sbjct: 494 LE 495
Score = 71 (30.1 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S D+ R ++K ++ I+T D GL+I ++++ D+G
Sbjct: 608 STFLEC---IPKSQ-QASVEWYIQRSGDEHREELK-PDERIIKT-DYGLLIRSLQKKDSG 661
Query: 348 KYDC 351
Y C
Sbjct: 662 MYYC 665
Score = 41 (19.5 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI T+
Sbjct: 658 KDSGMYYCKAQEHTFIHTI 676
>UNIPROTKB|E1BV84 [details] [associations]
symbol:SEMA6B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030215 "semaphorin receptor binding"
evidence=IEA] InterPro:IPR001627 InterPro:IPR015943 Pfam:PF01403
PROSITE:PS51004 SMART:SM00630 Gene3D:2.130.10.10 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
EMBL:AADN02066693 IPI:IPI00594367 Ensembl:ENSGALT00000001774
OMA:DISICRM Uniprot:E1BV84
Length = 483
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 90/227 (39%), Positives = 128/227 (56%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LK
Sbjct: 224 EPYFVHAVEWRSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDMGGSQRVLEKQWTSFLK 283
Query: 94 ARLNCSIPGEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCS+PG+ FYFN I DI ++ G VF+T T + GSA+C+F + +
Sbjct: 284 ARLNCSVPGDSHFYFNVIHAVTDILELNGRPVVL-AVFSTPTNSIPGSAVCAFDMTQVAA 342
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+F+EQ + S W V VP+PRPG C N + T PD +L F+++HPLMD
Sbjct: 343 VFEGRFREQKSPESIWTAVPEDMVPKPRPGCCAAPGMRYNSSSTFPDEILTFVKTHPLMD 402
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
EAV N P R + + + +V G + V F ++T
Sbjct: 403 EAVPSLGNAPWIVRT--MSRYQLRKIVVDNAAGPWGNHTVVFLGSST 447
>UNIPROTKB|F1PX52 [details] [associations]
symbol:SEMA6B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101956
EMBL:AAEX03012549 EMBL:AAEX03012550 EMBL:AAEX03012551
Ensembl:ENSCAFT00000030197 OMA:CHARPST Uniprot:F1PX52
Length = 765
Score = 423 (154.0 bits), Expect = 6.3e-39, P = 6.3e-39
Identities = 87/207 (42%), Positives = 122/207 (58%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK-NILSQNWATYLK 93
+P FV + + G +++FFFRE A+E+ K V SRVARVCK D GG +L + W ++LK
Sbjct: 226 EPYFVHAVEWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDLGGSPRVLEKQWTSFLK 285
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKVP--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERA 151
ARLNCS+PG+ FYFN +Q + V G VF+T + + GSA+C+F + +
Sbjct: 286 ARLNCSVPGDSHFYFNVLQAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAV 345
Query: 152 FVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMDE 205
F G+F+EQ + S W PV +VP PRPG C N + PD +LNF+++HPLMDE
Sbjct: 346 FEGRFREQKSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDE 405
Query: 206 AVAHRDNKPVFYRRDLL--FTHLVVDV 230
AV + P R + T + VDV
Sbjct: 406 AVPSLGHAPWIVRTLMRHQLTRVAVDV 432
>UNIPROTKB|F1MEW1 [details] [associations]
symbol:SEMA3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060666 "dichotomous subdivision of terminal units
involved in salivary gland branching" evidence=IEA] [GO:0048843
"negative regulation of axon extension involved in axon guidance"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0010633
"negative regulation of epithelial cell migration" evidence=IEA]
[GO:0007413 "axonal fasciculation" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0048813 GO:GO:0002027 GO:GO:0007413 InterPro:IPR003659
SMART:SM00423 GO:GO:0010633 GO:GO:0045499 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0060666 GO:GO:0048843 InterPro:IPR027231
PANTHER:PTHR11036 OMA:CTYIEVG GeneTree:ENSGT00560000076660
EMBL:DAAA02010328 EMBL:DAAA02010329 EMBL:DAAA02010330
EMBL:DAAA02010331 EMBL:DAAA02010332 IPI:IPI01001449
Ensembl:ENSBTAT00000024139 Uniprot:F1MEW1
Length = 737
Score = 395 (144.1 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 89/235 (37%), Positives = 128/235 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE A++ + GK+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 208 VYFFFRENAIDGEHTGKATHARIGQICKNDFGGHRSLVNKWTTFLKARLICSVPGPNGID 267
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K YGVFTTS+ GSA+C +S+ D+ R F+G + +
Sbjct: 268 THFDELQDVFLMNSKDPKNPVVYGVFTTSSNIFKGSAVCMYSMSDVRRVFLGPYAHRDGP 327
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F RSHP M V +N+P+
Sbjct: 328 NYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARSHPAMYNPVFPINNRPI 386
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFVKVRLLQDV 265
+ D+ FT +VVD V E +Y V F T T L+ V + D+
Sbjct: 387 MIKTDVNYQFTQIVVDRVDAE----DGQYDVMFIGTDVGTVLKVVSIPKETWHDL 437
Score = 51 (23.0 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 293 SCFVKLPASMANQPMSW-YHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
S F++ + W + ++ + +I+ D IRT + GL++ +++ D+G Y C
Sbjct: 558 STFLECSPKSQRALVYWQFQRRNEEPKEEIRV-DDHIIRT-EQGLLLRSLQRKDSGNYLC 615
>UNIPROTKB|F1MAG8 [details] [associations]
symbol:Sema3d "Protein Sema3d" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 KO:K06840 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 CTD:223117
IPI:IPI00199812 RefSeq:NP_001098103.1 UniGene:Rn.147480
Ensembl:ENSRNOT00000009489 GeneID:246262 KEGG:rno:246262 RGD:727939
NextBio:623611 ArrayExpress:F1MAG8 Uniprot:F1MAG8
Length = 777
Score = 379 (138.5 bits), Expect = 8.2e-39, Sum P(2) = 8.2e-39
Identities = 91/242 (37%), Positives = 130/242 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E +S+ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDRSILSRVGRVCKNDVGGQRSLINKWTTFLKARLVCSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 THFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FIR HP+M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIRRHPVMYKSVYPVAGAP 438
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V E +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVDHVVAE----DGQYDVMFLGTD-IGTVLKVVSISKEKWNMEEVV 493
Query: 273 CE 274
E
Sbjct: 494 LE 495
Score = 69 (29.3 bits), Expect = 8.2e-39, Sum P(2) = 8.2e-39
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S D+ R ++K ++ I+T D GL+I ++++ D+G
Sbjct: 608 STFLEC---IPKSQ-QASVEWYIQRSGDEHREELK-PDERIIKT-DYGLLIRSLQKKDSG 661
Query: 348 KYDC 351
Y C
Sbjct: 662 IYYC 665
Score = 39 (18.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI T+
Sbjct: 658 KDSGIYYCKAQEHTFIHTI 676
>ZFIN|ZDB-GENE-081105-129 [details] [associations]
symbol:si:ch211-87a2.1 "si:ch211-87a2.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-081105-129 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101956 EMBL:CR376858
EMBL:CR450766 IPI:IPI00800469 Ensembl:ENSDART00000013640
ArrayExpress:F1QGG4 Bgee:F1QGG4 Uniprot:F1QGG4
Length = 874
Score = 422 (153.6 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 88/207 (42%), Positives = 125/207 (60%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLK 93
+P FV + + G +V+FFFRE A+E+ K V SRVARVCK D GG + +L + W ++LK
Sbjct: 219 EPYFVSAVEWGPHVYFFFREMAMEFNYLEKVVVSRVARVCKADQGGSQRVLEKQWTSFLK 278
Query: 94 ARLNCSIPGEFPFYFNEIQD---IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIER 150
ARLNCSIPG+ FYFN + I ++ G D VF+T + + GSA+C+F +E +
Sbjct: 279 ARLNCSIPGDSHFYFNLLHSTSPIIRMHGRDI-ILAVFSTPSNSIPGSAVCAFDMEQLAG 337
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV------NDTETLPDSVLNFIRSHPLMD 204
F G+FKEQ + S W PV +P+PRPG C N + + PD +L F+++HPLMD
Sbjct: 338 VFDGRFKEQKSPESIWTPVPDEALPKPRPGGCAVQGSKFNSSNSFPDDMLTFVKTHPLMD 397
Query: 205 EAVAHRDNKPVFYRRDLLF--THLVVD 229
EAV +P R + + +VVD
Sbjct: 398 EAVPSLGQRPWIVRTMVRYQLNKMVVD 424
>ZFIN|ZDB-GENE-070912-187 [details] [associations]
symbol:sema5b "sema domain, seven thrombospondin
repeats (type 1 and type 1-like), transmembrane domain (TM) and
short cytoplasmic domain, (semaphorin) 5B" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001627 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-070912-187 GO:GO:0007275 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR000884 Pfam:PF00090
SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 EMBL:BX294387
EMBL:BX322793 EMBL:BX324147 IPI:IPI00504553
ProteinModelPortal:F1QPQ6 Ensembl:ENSDART00000087663
ArrayExpress:F1QPQ6 Bgee:F1QPQ6 Uniprot:F1QPQ6
Length = 1101
Score = 424 (154.3 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 86/204 (42%), Positives = 125/204 (61%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
+P F+ +YD+G + FFF RE AVE+ +CGK+V+SRVARVCK D GG+ +L W T+ KA
Sbjct: 238 EPHFISAYDVGLFTFFFLRENAVEH-DCGKTVYSRVARVCKNDIGGRFLLEDTWTTFTKA 296
Query: 95 RLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
RLNCS GE PFY+NE+Q + +P D YG+FTT+ + SA+C++++ I +AF G
Sbjct: 297 RLNCSRSGEIPFYYNELQSTFYLPEQDL-IYGIFTTNVNSIAASAVCAYNLSAITQAFNG 355
Query: 155 KFKEQATSTSAWLPVLSSRVPEPRPG-QC--VND---TETLPDSVLNFIRSHPLMDEAVA 208
F+ Q S WLP P P P QC +++ E L + L + LM++ V
Sbjct: 356 PFRSQENPRSTWLPT-----PNPIPNFQCGTIDEEGPNERLTERSLQDAQRLFLMNDVVQ 410
Query: 209 HRDNKPVFYRRDLLFTHLVVDVVQ 232
P+ ++ D+ F+ LVVD+VQ
Sbjct: 411 PVSVDPLVWQDDVRFSKLVVDIVQ 434
>UNIPROTKB|F1NBU4 [details] [associations]
symbol:F1NBU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
EMBL:AADN02071781 IPI:IPI00604256 Ensembl:ENSGALT00000004831
OMA:YVFFTET Uniprot:F1NBU4
Length = 628
Score = 363 (132.8 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 82/200 (41%), Positives = 116/200 (58%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++ FF ETAVE+ K + SR+AR+CK D GGK +L + W ++LKARL+CSIP E F+
Sbjct: 234 IYVFFTETAVEFEFYDKILVSRIARICKGDLGGKRLLQRRWTSFLKARLSCSIP-ELNFH 292
Query: 108 FNEIQDIY---KVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN IQD++ + D+ FYG+F+ L SA+C++S+ I+ AF G ++ T
Sbjct: 293 FNIIQDVFFLRRGKWQDSIFYGIFSQQWGRLDISAVCAYSMASIQEAFSKGSYRGPVTVE 352
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S W+ V VP PRPG C+ N + LPD VL F R HPLMD +V
Sbjct: 353 HSHVRWM-VFRGEVPVPRPGACIDNFARNMGYNTSSDLPDKVLQFARDHPLMDSSVNPIG 411
Query: 212 NKPVFYRRDLLFTHLVVDVV 231
++P +R +T +VVD V
Sbjct: 412 DRPALLKRSSNYTRIVVDRV 431
Score = 77 (32.2 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTV-TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY 319
L+Q+V S C S +++ + T G +VHL C V L +++A + W K G
Sbjct: 543 LIQNVKYGDASSCLSVENDVRKYLFTLGNNVHLKC-VPL-SNLAR--VVW----KFNGS- 593
Query: 320 QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+I+ + K++ DGG+ I V + G YDC
Sbjct: 594 RIQDKDSKYL-LYDGGIAIFNVTVAETGFYDC 624
>ZFIN|ZDB-GENE-081105-78 [details] [associations]
symbol:si:ch211-106g4.2 "si:ch211-106g4.2"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-081105-78 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
EMBL:BX548158 IPI:IPI00865711 Ensembl:ENSDART00000015985
Uniprot:E7F2Z2
Length = 781
Score = 385 (140.6 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 88/226 (38%), Positives = 124/226 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
VFFFFRETAVE GK +SR+ ++C+ D GG+ L W T+LKARL CS+PG
Sbjct: 242 VFFFFRETAVEAQGFGKVTYSRIGQLCRNDMGGQRSLVNKWTTFLKARLVCSVPGNDGTE 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D K Y VFTTS++ GSA+C +++ DI RAF+G F +
Sbjct: 302 THFDELRDVFLLQTRDKKNPLIYTVFTTSSSVFQGSAVCLYTMNDIRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P +VP PRPG C + T+ PD+V+ F R HPLM V +P+
Sbjct: 362 NYQWIP-FQGKVPYPRPGMCPSKTFGSFESTKGFPDNVIQFARHHPLMFNPVTPLGGRPL 420
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKV 259
F R + FT + VD V Y V F T + +V +KV
Sbjct: 421 FLRTGIPYTFTQITVDRVN----AADGHYDVMFIGTADVGSV-LKV 461
Score = 60 (26.2 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 287 GQSVHLSCFVKLPASMANQPMSW-YHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELD 345
G S L C +P S+ Q ++W Y + R ++ R D+ + + GL++ D
Sbjct: 592 GSSSFLEC---VPKSLQAQ-ITWTYQKLPENPREEV--RLDERVLQTERGLLLRRAVRRD 645
Query: 346 AGKYDC 351
AG Y C
Sbjct: 646 AGVYQC 651
Score = 44 (20.5 bits), Expect = 7.8e-37, Sum P(2) = 7.8e-37
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 267 NTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSK-DKGR 318
NT D ICE R K +++ G+S +++PA W H + KGR
Sbjct: 715 NTVDQICEQVWSR-KHSLS-GKSPPDPA-IEVPAHDPLNSKKWKHLKEMRKGR 764
>UNIPROTKB|Q9C0C4 [details] [associations]
symbol:SEMA4C "Semaphorin-4C" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0042692 "muscle cell differentiation"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IDA] [GO:0030672 "synaptic vesicle membrane"
evidence=ISS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0021535 "cell migration in hindbrain" evidence=ISS] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=ISS]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 GO:GO:0030672 GO:GO:0042692
GO:GO:0021549 GO:GO:0001843 InterPro:IPR003659 SMART:SM00423
GO:GO:0032874 GO:GO:0021535 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521 EMBL:AY358842
EMBL:BC017476 EMBL:BC109103 EMBL:BC109104 EMBL:AB051526
IPI:IPI00073763 RefSeq:NP_060259.4 UniGene:Hs.516220
ProteinModelPortal:Q9C0C4 SMR:Q9C0C4 STRING:Q9C0C4
PhosphoSite:Q9C0C4 DMDM:47606208 PRIDE:Q9C0C4
Ensembl:ENST00000305476 GeneID:54910 KEGG:hsa:54910 UCSC:uc002sxg.4
CTD:54910 GeneCards:GC02M097525 HGNC:HGNC:10731 HPA:HPA011090
MIM:604462 neXtProt:NX_Q9C0C4 PharmGKB:PA35653 InParanoid:Q9C0C4
OMA:YNASHLY OrthoDB:EOG4WH8K5 PhylomeDB:Q9C0C4 GenomeRNAi:54910
NextBio:57962 ArrayExpress:Q9C0C4 Bgee:Q9C0C4 CleanEx:HS_SEMA4C
Genevestigator:Q9C0C4 GermOnline:ENSG00000168758 Uniprot:Q9C0C4
Length = 833
Score = 400 (145.9 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 95/236 (40%), Positives = 132/236 (55%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGS+ D K V+FFFRE AVE + V +RVARVCK D GG L
Sbjct: 214 HFVGSAYVPESVGSFTGDDDK-VYFFFRERAVESDCYAEQVVARVARVCKGDMGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P + YFN++Q ++ + +T F+GVF + SAIC
Sbjct: 273 RKWTTFLKARLACSAPN-WQLYFNQLQAMHTLQDTSWHNTTFFGVFQAQWGDMYLSAICE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E+I+R F G +KE W + VP PRPG C+N+ T +L PD++
Sbjct: 332 YQLEEIQRVFEGPYKEYHEEAQKW-DRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNF++ HPLM+E V R ++P+ ++ FTHLV D V + G T Y V F T
Sbjct: 391 LNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTHLVADRVT-GLDGAT--YTVLFIGT 443
Score = 43 (20.2 bits), Expect = 3.3e-38, Sum P(2) = 3.3e-38
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 336 LVIMAVEELDAGKYDCW 352
LV+MA + AG Y C+
Sbjct: 612 LVVMAAQPRHAGAYHCF 628
>UNIPROTKB|E2R400 [details] [associations]
symbol:SEMA3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076660 CTD:223117 OMA:ERVELCK
EMBL:AAEX03011293 EMBL:AAEX03011294 RefSeq:XP_533138.2
Ensembl:ENSCAFT00000009942 GeneID:475929 KEGG:cfa:475929
Uniprot:E2R400
Length = 777
Score = 373 (136.4 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 89/242 (36%), Positives = 129/242 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGTTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGNDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 THFDELQDIYLLPTRDERNPVVYGVFTTTSSIFRGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ HP+M + + P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHPVMFKPIYPVAGGP 438
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V E +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVDHVVAE----DGQYDVMFLGTD-IGTVLKVVSISKEKWNMEEVV 493
Query: 273 CE 274
E
Sbjct: 494 LE 495
Score = 69 (29.3 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S D+ R ++K ++ I+T + GL+I ++++ D+G
Sbjct: 608 STFLEC---IPKSQ-QASIKWYIQRSGDEHREELK-PDERIIKT-EYGLLIRSLQKKDSG 661
Query: 348 KYDC 351
Y C
Sbjct: 662 MYHC 665
Score = 42 (19.8 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI T+
Sbjct: 658 KDSGMYHCKAQEHTFIHTI 676
>ZFIN|ZDB-GENE-990715-2 [details] [associations]
symbol:sema3d "semaphorin 3d" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0010002 "cardioblast differentiation" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0007508 "larval heart
development" evidence=IMP] [GO:0001755 "neural crest cell
migration" evidence=IMP] [GO:0014033 "neural crest cell
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0021534 "cell proliferation in hindbrain" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IGI;IMP] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0030516 "regulation of axon
extension" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0060272 "embryonic
skeletal joint morphogenesis" evidence=IMP] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-990715-2 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0010002
GO:GO:0051726 GO:GO:0030516 GO:GO:0051216 GO:GO:0048538
GO:GO:0007413 InterPro:IPR003659 SMART:SM00423 GO:GO:0060272
GO:GO:0031101 GO:GO:0031290 GO:GO:0021534 GO:GO:0035050
GO:GO:0048936 GO:GO:0007508 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
EMBL:CU633862 EMBL:CU855784 EMBL:CU861648 IPI:IPI00993038
Ensembl:ENSDART00000127469 Uniprot:E7F4B6
Length = 766
Score = 381 (139.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 91/244 (37%), Positives = 133/244 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + KSV SRVAR+C+ D GG L+ W T+LKARL CSIPG
Sbjct: 264 IYFFFREASRDGSTTDKSVLSRVARICRNDVGGLRSLTNKWTTFLKARLVCSIPGPDGVD 323
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLM--GSAICSFSIEDIERAFVGKFKEQA 160
+F+E+QDI+ +P D K YGVFTT+ + GSA+C +++EDI AF G + +
Sbjct: 324 THFDELQDIFLLPSRDEKNPMVYGVFTTTRVSSIFKGSAVCVYTMEDIRAAFNGPYAHKE 383
Query: 161 TSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
W+ R+P PRPG C + T+ PD V++FIR HPLM ++V
Sbjct: 384 GPDHRWVEY-EGRIPYPRPGTCPSRTYDPHIKTTKDFPDEVISFIRLHPLMYQSVHPMTG 442
Query: 213 KPVFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSD 270
+P+F R + T ++VD V E +Y V F T + +V V + Q+ ++ +
Sbjct: 443 RPIFTRINTEYRLTQIIVDRVAAE----DGQYAVMFLGTD-MGSVLKVVSITQENWSSEE 497
Query: 271 SICE 274
I E
Sbjct: 498 IILE 501
Score = 60 (26.2 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 263 QDVSNTSDSI-C---ESSVGR-LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
QD+ + S C E +GR +++ V +G + S F++ + + W+
Sbjct: 579 QDIKHGDPSSHCWDTEDVLGRNVEEKVLYGVESN-SSFLECVSKSQQALIRWFVLKPGVD 637
Query: 318 RYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
Q + + D+ + D GL+I ++ DAG Y C
Sbjct: 638 HRQ-EIKPDERVLITDRGLLIRWLQRGDAGSYFC 670
>UNIPROTKB|O95025 [details] [associations]
symbol:SEMA3D "Semaphorin-3D" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0005576 GO:GO:0007399 GO:GO:0030154 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 CTD:223117 eggNOG:NOG247995
OMA:ERVELCK OrthoDB:EOG4SQWW5 EMBL:AY358937 EMBL:AC004957
EMBL:BC029590 IPI:IPI00028213 RefSeq:NP_689967.2 UniGene:Hs.201340
ProteinModelPortal:O95025 SMR:O95025 STRING:O95025
PhosphoSite:O95025 PaxDb:O95025 PRIDE:O95025 DNASU:223117
Ensembl:ENST00000284136 GeneID:223117 KEGG:hsa:223117
UCSC:uc003uib.3 GeneCards:GC07M084624 H-InvDB:HIX0006812
HGNC:HGNC:10726 HPA:HPA037522 MIM:609907 neXtProt:NX_O95025
PharmGKB:PA35648 InParanoid:O95025 ChiTaRS:SEMA3D GenomeRNAi:223117
NextBio:91714 ArrayExpress:O95025 Bgee:O95025 CleanEx:HS_SEMA3D
Genevestigator:O95025 GermOnline:ENSG00000153993 Uniprot:O95025
Length = 777
Score = 373 (136.4 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 89/242 (36%), Positives = 128/242 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 IYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E+QDIY +P D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 320 TYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESA 379
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ H +M ++V P
Sbjct: 380 DHRWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGP 438
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
F R D T +VVD V +Y V F T + TV V + ++ N + +
Sbjct: 439 TFKRINVDYRLTQIVVD----HVIAEDGQYDVMFLGTD-IGTVLKVVSISKEKWNMEEVV 493
Query: 273 CE 274
E
Sbjct: 494 LE 495
Score = 67 (28.6 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S D+ R ++K ++ I+T + GL+I ++++ D+G
Sbjct: 608 STFLEC---IPKSQ-QATIKWYIQRSGDEHREELK-PDERIIKT-EYGLLIRSLQKKDSG 661
Query: 348 KYDC 351
Y C
Sbjct: 662 MYYC 665
Score = 41 (19.5 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI T+
Sbjct: 658 KDSGMYYCKAQEHTFIHTI 676
>MGI|MGI:109252 [details] [associations]
symbol:Sema4c "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4C" species:10090 "Mus musculus" [GO:0001843 "neural
tube closure" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021535 "cell migration in hindbrain" evidence=IMP] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030672 "synaptic vesicle membrane" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=ISO]
[GO:0042692 "muscle cell differentiation" evidence=ISO;IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0071526 "semaphorin-plexin signaling
pathway" evidence=IMP] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 MGI:MGI:109252 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0030054 GO:GO:0045211 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 GO:GO:0030672 GO:GO:0042692
GO:GO:0021549 GO:GO:0001843 InterPro:IPR003659 SMART:SM00423
GO:GO:0032874 GO:GO:0021535 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
GeneTree:ENSGT00560000076864 CTD:54910 OMA:YNASHLY
OrthoDB:EOG4WH8K5 EMBL:S79463 IPI:IPI00890869 PIR:S66498
RefSeq:NP_001119519.1 UniGene:Mm.29558 ProteinModelPortal:Q64151
SMR:Q64151 IntAct:Q64151 MINT:MINT-91862 STRING:Q64151
PhosphoSite:Q64151 PRIDE:Q64151 Ensembl:ENSMUST00000027295
Ensembl:ENSMUST00000114990 Ensembl:ENSMUST00000114991
Ensembl:ENSMUST00000114992 GeneID:20353 KEGG:mmu:20353
UCSC:uc007aqq.2 InParanoid:Q64151 ChiTaRS:SEMA4C NextBio:298215
Bgee:Q64151 Genevestigator:Q64151 GermOnline:ENSMUSG00000026121
Uniprot:Q64151
Length = 834
Score = 393 (143.4 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 91/236 (38%), Positives = 133/236 (56%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGS+ D K ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 214 HFVGSAFVPESVGSFTGDDDK-IYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+GVF + SA+C
Sbjct: 273 KKWTTFLKARLVCSAP-DWKVYFNQLKAVHTLRGASWHNTTFFGVFQARWGDMDLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E I++ F G +KE + W + VP PRPG C+N+ T +L PD+
Sbjct: 332 YQLEQIQQVFEGPYKEYSEQAQKWARY-TDPVPSPRPGSCINNWHRDNGYTSSLELPDNT 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM++ V R +P+ +++ FTH+V D V + G T Y V F T
Sbjct: 391 LNFIKKHPLMEDQVKPRLGRPLLVKKNTNFTHVVADRVP-GLDGAT--YTVLFIGT 443
Score = 46 (21.3 bits), Expect = 9.4e-38, Sum P(2) = 9.4e-38
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 261 LLQDVSNTSDS-ICES-SVGRLKQ-----TVTWGQSVHLSCFVKLPASMANQPMSWYHYS 313
L+Q V+N S +C + +++ TV G + L C L +++A+ W S
Sbjct: 538 LVQHVANLDTSKMCNQYGIKKVRSIPKNITVVSGTDLVLPCH--LSSNLAHA--HWTFGS 593
Query: 314 KDKGRYQI-KFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352
+D Q F D ++ LV+MA + +G Y C+
Sbjct: 594 QDLPAEQPGSFLYDTGLQA----LVVMAAQSRHSGPYRCY 629
>UNIPROTKB|E1BE15 [details] [associations]
symbol:SEMA3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 OMA:ERVELCK
EMBL:DAAA02010317 EMBL:DAAA02010318 IPI:IPI00923903
Ensembl:ENSBTAT00000061438 Uniprot:E1BE15
Length = 778
Score = 368 (134.6 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 91/244 (37%), Positives = 131/244 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
V+FFFRE++ E K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 260 VYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKWTTFLKARLICSIPGSDGAD 319
Query: 106 FYFNE--IQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
+F+E I+DIY +P D + YGVFTT+++ GSA+C +S+ DI F G + +
Sbjct: 320 THFDELLIEDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCMYSMADIRAVFNGPYAHKE 379
Query: 161 TSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
++ W+ R+P PRPG C + T PD V++FI+ HP+M ++V
Sbjct: 380 SADHCWVQY-DGRIPYPRPGTCPSKTYDPLIKSTRDFPDDVISFIKRHPVMYKSVYPVLG 438
Query: 213 KPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSD 270
+P F R D T +VVD V E +Y V F T + TV V + ++ N +
Sbjct: 439 RPTFKRINVDYRLTQIVVDHVVAE----DGQYDVMFLGTD-IGTVLKVVSISKEKWNIEE 493
Query: 271 SICE 274
+ E
Sbjct: 494 VVLE 497
Score = 69 (29.3 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 270 DSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKF 328
DSI E + ++ + + S L C +P S + WY S D+ R ++K ++
Sbjct: 591 DSISEPADEKVIFGIEFN-STFLEC---IPKSQ-QASVKWYIQRSGDEHREEVK-PDERI 644
Query: 329 IRTVDGGLVIMAVEELDAGKYDC 351
I+T + GL+I ++++ D+G Y C
Sbjct: 645 IKT-EYGLLIRSLQKKDSGLYYC 666
Score = 40 (19.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI T+
Sbjct: 659 KDSGLYYCKAQEHTFIHTI 677
>ZFIN|ZDB-GENE-991209-6 [details] [associations]
symbol:sema3ab "semaphorin 3ab" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0048755 "branching morphogenesis of
a nerve" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI] [GO:0001569 "patterning of blood vessels"
evidence=IMP] [GO:0001763 "morphogenesis of a branching structure"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-991209-6 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0008045 GO:GO:0001569 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR003659 SMART:SM00423 GO:GO:0048755 SUPFAM:SSF103575
SUPFAM:SSF101912 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
OrthoDB:EOG4ZPDTM InterPro:IPR027231 PANTHER:PTHR11036
EMBL:AF083382 IPI:IPI00487230 RefSeq:NP_571136.1 UniGene:Dr.81290
ProteinModelPortal:Q9W686 SMR:Q9W686 STRING:Q9W686 GeneID:30267
KEGG:dre:30267 CTD:30267 eggNOG:NOG305380 InParanoid:Q9W686
NextBio:20806714 ArrayExpress:Q9W686 Uniprot:Q9W686
Length = 778
Score = 372 (136.0 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 85/227 (37%), Positives = 123/227 (54%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
++ FFRE A++ K+ +R+ ++CK D GG L W T+LKARL CS+PG
Sbjct: 244 IYLFFRENAIDGEQISKATHARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSA+C +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P L+ RVP PRPG C + T+ PD V+ F RSHP M V +N P+
Sbjct: 364 NYQWVPFLN-RVPYPRPGTCPSKTFDGFESTKDFPDDVITFARSHPAMYNPVFPINNHPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
+ D+ FT +VVD V+ E +Y V F T T L+ V +
Sbjct: 423 IIKTDVDYQFTQIVVDRVEAE----DGQYDVMFIGTDMGTVLKVVSI 465
Score = 64 (27.6 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 16/78 (20%), Positives = 43/78 (55%)
Query: 274 ESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVD 333
+ G L +TV +G + S F++ + + + + ++ + + ++++ +SD+ + +
Sbjct: 578 DGEAGLLDKTV-YGVE-NSSSFLEC-SPKSQRALIYWQFQRHGEDHKLEIKSDERVLGTE 634
Query: 334 GGLVIMAVEELDAGKYDC 351
GL+I ++ + D+G Y C
Sbjct: 635 QGLLIRSLHQKDSGVYYC 652
>UNIPROTKB|I3LBY1 [details] [associations]
symbol:I3LBY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
EMBL:FP102744 Ensembl:ENSSSCT00000028512 OMA:TYEINES Uniprot:I3LBY1
Length = 617
Score = 405 (147.6 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 110/292 (37%), Positives = 156/292 (53%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGS+ D K V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 214 HFVGSAYVPESVGSFTGDDDK-VYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 273 RKWTTFLKARLVCSAP-DWQLYFNQLQALHTLLDASWHNTTFFGVFRARWGDVDLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E+I+R F G +KE W + VP PRPG C+N+ T +L PD+
Sbjct: 332 YQLEEIQRVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHGRHGYTSSLELPDNT 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--- 250
LNFI+ HPLM+E V R +P+ ++D FTHLV D V + G T Y V F T
Sbjct: 391 LNFIKKHPLMEEQVDPRWGRPLLVKKDTNFTHLVADRV-VGLDGAT--YTVLFIGTGDGW 447
Query: 251 TLRTVFVK--VRLLQDVSNTSDSICESSV-GRLKQTVTWGQSVHLSCFVKLP 299
L+ V + V L++++ ES V + KQ + + S S V+LP
Sbjct: 448 VLKAVSLGPWVHLIEELQVFDQEPVESLVLSQSKQKLLFAGS--RSQLVQLP 497
>UNIPROTKB|Q90663 [details] [associations]
symbol:SEMA3D "Semaphorin-3D" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0005576 GO:GO:0007399 GO:GO:0030154 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
EMBL:U28240 IPI:IPI00583805 RefSeq:NP_990704.1 UniGene:Gga.3972
ProteinModelPortal:Q90663 SMR:Q90663 Ensembl:ENSGALT00000010596
GeneID:396332 KEGG:gga:396332 CTD:223117 eggNOG:NOG247995
InParanoid:Q90663 OMA:ERVELCK OrthoDB:EOG4SQWW5 NextBio:20816380
Uniprot:Q90663
Length = 761
Score = 365 (133.5 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 88/242 (36%), Positives = 128/242 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + K++ SRV RVCK D GG+ L W T+LKARL CSIPG
Sbjct: 248 IYFFFREISQDSSTSDKTILSRVGRVCKNDMGGQRSLINKWTTFLKARLVCSIPGPEGAD 307
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QDI+ + D + YGVFTT+++ GSA+C +S+ DI F G + + ++
Sbjct: 308 THFDELQDIFLLSTRDERNPLVYGVFTTTSSVFKGSAVCVYSMADIRAVFNGPYAHKESA 367
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ R+P PRPG C + T PD V++FI+ HPLM ++V P
Sbjct: 368 DHRWVQY-EGRIPYPRPGTCPSKTYDPLIKSTRDFPDEVISFIKRHPLMYKSVYPLTGGP 426
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
VF R D T +VVD V E +Y V F T + TV V + ++ + +
Sbjct: 427 VFTRINVDYRLTQIVVDHVMAE----DGQYDVIFLGTD-IGTVLKAVSITKEKWTKEEVV 481
Query: 273 CE 274
E
Sbjct: 482 LE 483
Score = 66 (28.3 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S ++ R ++K ++ I+T + GL+I +++ DAG
Sbjct: 596 STFLEC---IPKSQ-QASIRWYIQRSGEEHREELK-ADERIIKT-EHGLLIRSLQRRDAG 649
Query: 348 KYDC 351
Y C
Sbjct: 650 AYFC 653
>RGD|1562837 [details] [associations]
symbol:Sema4c "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4C" species:10116 "Rattus norvegicus" [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021535 "cell migration in hindbrain" evidence=IEA;ISO]
[GO:0021549 "cerebellum development" evidence=IEA;ISO] [GO:0030672
"synaptic vesicle membrane" evidence=IEA;ISO] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA;ISO]
[GO:0042692 "muscle cell differentiation" evidence=IEA;ISO]
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IEA;ISO]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 RGD:1562837
GO:GO:0016021 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0030672 GO:GO:0021549 GO:GO:0001843 InterPro:IPR003659
SMART:SM00423 EMBL:CH473965 GO:GO:0032874 GO:GO:0021535
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06521 GeneTree:ENSGT00560000076864 CTD:54910
OMA:YNASHLY OrthoDB:EOG4WH8K5 IPI:IPI00362228 RefSeq:NP_001100372.1
UniGene:Rn.136218 Ensembl:ENSRNOT00000021956 GeneID:301346
KEGG:rno:301346 UCSC:RGD:1562837 NextBio:648565 Uniprot:D4A9J3
Length = 834
Score = 389 (142.0 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 91/236 (38%), Positives = 132/236 (55%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGS+ D K ++FFF E AVEY + V +RVARVCK D GG L
Sbjct: 214 HFVGSAFVPESVGSFTGDDDK-IYFFFSERAVEYDCYSEQVVARVARVCKGDMGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P ++ YFN+++ ++ + G +T F+ VF + SA+C
Sbjct: 273 KKWTTFLKARLVCSAP-DWKVYFNQLRAVHTLLGASWHNTTFFAVFQARWGDMDLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E I++ F G FKE + W + VP PRPG C+N+ T +L PD+
Sbjct: 332 YQLEHIQQVFEGPFKEYSEQAQKWARY-TDPVPTPRPGSCINNWHRDNGYTSSLELPDNT 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LNFI+ HPLM+E V R +P+ +++ FTH+V D + + G T Y V F T
Sbjct: 391 LNFIKKHPLMEEQVKPRLGRPLLVKKNTNFTHVVADRI-LGLDGAT--YTVLFIGT 443
Score = 43 (20.2 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 261 LLQDVSNTSDS-IC-ESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMS--WYHYSKDK 316
L+Q V+N S +C + ++ + + V +V + LP +++ W +D
Sbjct: 537 LVQHVANLDPSKMCIQYAIKKARPVVPKNITVVAGTDLVLPCHLSSNLAHALWTFRGRDL 596
Query: 317 GRYQI-KFRSDKFIRTVDGGLVIMAVEELDAGKYDCW 352
Q F D ++ LV+MA + +G Y C+
Sbjct: 597 PAEQPGSFLYDTGLQA----LVVMAAQSRHSGPYHCY 629
>UNIPROTKB|F1STD1 [details] [associations]
symbol:SEMA4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 OMA:YNASHLY
EMBL:FP102542 Ensembl:ENSSSCT00000008978 Uniprot:F1STD1
Length = 836
Score = 405 (147.6 bits), Expect = 7.7e-37, P = 7.7e-37
Identities = 110/292 (37%), Positives = 156/292 (53%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGS+ D K V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 214 HFVGSAYVPESVGSFTGDDDK-VYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P ++ YFN++Q ++ + +T F+GVF + SA+C
Sbjct: 273 RKWTTFLKARLVCSAP-DWQLYFNQLQALHTLLDASWHNTTFFGVFRARWGDVDLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E+I+R F G +KE W + VP PRPG C+N+ T +L PD+
Sbjct: 332 YQLEEIQRVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNT 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--- 250
LNFI+ HPLM+E V R +P+ ++D FTHLV D V + G T Y V F T
Sbjct: 391 LNFIKKHPLMEEQVDPRWGRPLLVKKDTNFTHLVADRV-VGLDGAT--YTVLFIGTGDGW 447
Query: 251 TLRTVFVK--VRLLQDVSNTSDSICESSV-GRLKQTVTWGQSVHLSCFVKLP 299
L+ V + V L++++ ES V + KQ + + S S V+LP
Sbjct: 448 VLKAVSLGPWVHLIEELQVFDQEPVESLVLSQSKQKLLFAGS--RSQLVQLP 497
>UNIPROTKB|E1BDM5 [details] [associations]
symbol:SEMA4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IEA] [GO:0030672 "synaptic vesicle membrane"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021535 "cell migration in hindbrain" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0014069 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0030672 GO:GO:0021549 GO:GO:0001843 InterPro:IPR003659
SMART:SM00423 GO:GO:0032874 GO:GO:0021535 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
KO:K06521 GeneTree:ENSGT00560000076864 CTD:54910 OMA:YNASHLY
EMBL:DAAA02030124 EMBL:DAAA02030125 IPI:IPI00702883
RefSeq:NP_001179552.1 UniGene:Bt.48694 Ensembl:ENSBTAT00000029225
GeneID:526028 KEGG:bta:526028 NextBio:20874286 Uniprot:E1BDM5
Length = 833
Score = 397 (144.8 bits), Expect = 5.5e-36, P = 5.5e-36
Identities = 108/292 (36%), Positives = 154/292 (52%)
Query: 28 HRYDNCLQPDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS 85
H + P+ VGSY D K V+FFF E AVEY + V +RVARVCK D GG L
Sbjct: 214 HFVGSAYVPESVGSYTGDDDK-VYFFFSERAVEYDCYAEQVVARVARVCKGDVGGARTLQ 272
Query: 86 QNWATYLKARLNCSIPGEFPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICS 142
+ W T+LKARL CS P ++ YFN +Q ++ + +T F+GVF + SA+C
Sbjct: 273 RKWTTFLKARLVCSAP-DWQLYFNRLQALHTLQDASWHNTTFFGVFRARWGDMDLSAVCE 331
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSV 193
+ +E+I++ F G +KE W + VP PRPG C+N+ T +L PD++
Sbjct: 332 YQLEEIQKVFEGPYKEYHEQAQKW-GRYTDPVPSPRPGSCINNWHRRHGYTSSLELPDNI 390
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT-- 251
LNFI+ HPLM+E V R +P+ +++ THLV D V + G T Y V F T
Sbjct: 391 LNFIKKHPLMEEQVRPRWGRPLLVKKNANLTHLVADRVT-GLDGAT--YTVLFIGTGDGW 447
Query: 252 -LRTVFVK--VRLLQDVSNTSDSICESSV-GRLKQTVTWGQSVHLSCFVKLP 299
L+ V + V L++++ ES V R K+ + G L V+LP
Sbjct: 448 LLKAVSLGPWVHLIEELQLFDQEPVESLVLSRSKKLLFAGSRSQL---VQLP 496
>ZFIN|ZDB-GENE-991209-3 [details] [associations]
symbol:sema3aa "semaphorin 3aa" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0048755 "branching morphogenesis of a
nerve" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0001570 "vasculogenesis" evidence=IMP]
[GO:0035441 "cell migration involved in vasculogenesis"
evidence=IMP] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-991209-3 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0008045 GO:GO:0048844 InterPro:IPR003659 SMART:SM00423
GO:GO:0048755 SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0035441
EMBL:AF086761 IPI:IPI00500614 RefSeq:NP_571135.1 UniGene:Dr.83348
ProteinModelPortal:Q9W7J1 SMR:Q9W7J1 STRING:Q9W7J1 GeneID:30266
KEGG:dre:30266 CTD:30266 eggNOG:NOG293968 HOGENOM:HOG000039964
HOVERGEN:HBG055071 InParanoid:Q9W7J1 KO:K06840 OrthoDB:EOG4ZPDTM
NextBio:20806713 ArrayExpress:Q9W7J1 InterPro:IPR027231
PANTHER:PTHR11036 Uniprot:Q9W7J1
Length = 860
Score = 378 (138.1 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 87/227 (38%), Positives = 122/227 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EFP 105
+F FF+E A++ + GK+ SR+ ++CK D GG L W T+LKA+L CS+PG
Sbjct: 244 IFLFFKENAMDGEHTGKATISRIGQLCKNDMGGHRSLVNKWTTFLKAKLTCSVPGLNGID 303
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ + D K Y VFTTS+ GSAIC +S+ DI R F+G + +
Sbjct: 304 THFDELQDVFLMSAKDPKNPVIYAVFTTSSNIFRGSAICMYSMADIRRVFLGPYAHRDGP 363
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+P RVP PRPG C + T+ LPD V+ F R HP M V KP+
Sbjct: 364 NYQWVP-FQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARLHPAMYNPVQPMGGKPI 422
Query: 216 FYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
R ++ FT LVVD V+ E +Y V F T T L+ V +
Sbjct: 423 VVRTNVEYQFTQLVVDRVEAE----DGQYDVMFIGTDLGTVLKVVTI 465
Score = 38 (18.4 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 315 DKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
D+ +++I D+ + GL+I ++ + D+G + C
Sbjct: 618 DERKHEIVI--DERLSLTGQGLLIRSLTQADSGVFLC 652
>FB|FBgn0250876 [details] [associations]
symbol:Sema-5c "Semaphorin-5c" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007411 "axon guidance" evidence=ISS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=IEP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0048036 "central complex development"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IMP]
[GO:0001964 "startle response" evidence=IMP] [GO:0031987
"locomotion involved in locomotory behavior" evidence=IMP]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 EMBL:AE014296 GO:GO:0001700
Gene3D:2.130.10.10 GO:GO:0004872 GO:GO:0042048 InterPro:IPR000884
Pfam:PF00090 SMART:SM00209 SUPFAM:SSF82895 PROSITE:PS50092
HSSP:P07996 InterPro:IPR003659 SMART:SM00423 GO:GO:0048854
GO:GO:0031987 GO:GO:0001964 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0048036 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 KO:K06841 UniGene:Dm.3301 GeneID:37066
KEGG:dme:Dmel_CG5661 CTD:37066 FlyBase:FBgn0250876 GenomeRNAi:37066
NextBio:801775 RefSeq:NP_611293.3 ProteinModelPortal:Q9VTT0
SMR:Q9VTT0 IntAct:Q9VTT0 MINT:MINT-845254 STRING:Q9VTT0
EnsemblMetazoa:FBtr0076052 UCSC:CG5661-RA InParanoid:Q9VTT0
OMA:SWRQMEN PhylomeDB:Q9VTT0 ArrayExpress:Q9VTT0 Bgee:Q9VTT0
Uniprot:Q9VTT0
Length = 1093
Score = 383 (139.9 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 80/215 (37%), Positives = 132/215 (61%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKN-ILSQNWATYLKARL 96
FVGS++ G +V+F RE+A E+++CGK ++SRVARVCK D GG +L NW ++LKARL
Sbjct: 235 FVGSFEAGHFVYFLLRESAAEHMSCGKVIYSRVARVCKNDVGGGGQLLRDNWTSFLKARL 294
Query: 97 NCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKF 156
NCS+PGE+P+YF+EIQ + + Y F TS + + GSA+C++++ I AF G F
Sbjct: 295 NCSLPGEYPYYFDEIQGMTYAESESI-LYATFRTSGSSIFGSAVCAYNLSSINAAFDGPF 353
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRS--HPLMDEAVAHRDNKP 214
K+Q S +AW V +++ + QC S+ +++ S + LMDEAV +P
Sbjct: 354 KQQEHSDAAWKTVNTNQRSQ---FQCGTS------SIGHWLESSRYQLMDEAVQPIGAEP 404
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+++ + F L +D++ + T ++++ A++
Sbjct: 405 LYHSKLEQFGRLALDIINTK---TEQVHVLFVASS 436
Score = 37 (18.1 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 5/10 (50%), Positives = 8/10 (80%)
Query: 343 ELDAGKYDCW 352
EL+ G++ CW
Sbjct: 847 ELEHGEWGCW 856
>UNIPROTKB|C9JPG5 [details] [associations]
symbol:SEMA3F "Semaphorin-3F" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 EMBL:AC104450
HOGENOM:HOG000039964 InterPro:IPR027231 PANTHER:PTHR11036
EMBL:AC000063 HGNC:HGNC:10728 OrthoDB:EOG470TGQ IPI:IPI00927665
ProteinModelPortal:C9JPG5 SMR:C9JPG5 STRING:C9JPG5
Ensembl:ENST00000413852 ArrayExpress:C9JPG5 Bgee:C9JPG5
Uniprot:C9JPG5
Length = 686
Score = 341 (125.1 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 80/225 (35%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 176 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 234
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 235 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 294
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 295 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 353
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + + V Q + Y V F T T++ V V
Sbjct: 354 LVVRTGAPYRLTTIAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 396
Score = 71 (30.1 bits), Expect = 3.5e-35, Sum P(2) = 3.5e-35
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D G + + R+ D+F+RT + GL++ A++ D
Sbjct: 520 GSAAFLECQPRSPQAT----VKWL-FQRDPGDRRREIRAEDRFLRT-EQGLLLRALQLSD 573
Query: 346 AGKYDC 351
G Y C
Sbjct: 574 RGLYSC 579
>ZFIN|ZDB-GENE-050208-762 [details] [associations]
symbol:si:dkey-49n23.1 "si:dkey-49n23.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-050208-762 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000102148 EMBL:AL831726
EMBL:BX324215 IPI:IPI00484288 Ensembl:ENSDART00000059965
Bgee:F1Q5G8 Uniprot:F1Q5G8
Length = 1008
Score = 380 (138.8 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 90/222 (40%), Positives = 128/222 (57%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P+FVGSY I V+FFF+ETAVE K ++SRVARVCK D GGK L
Sbjct: 227 EPEFVGSYSIPDTHSLDDDKVYFFFKETAVESNQLDKRIYSRVARVCKNDIGGKRSLINR 286
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL C++PG +F+E++DI+ + D + YGVF+TS++ GSA+C
Sbjct: 287 WSTFLKARLVCTVPGPGGMDTHFDELEDIFLLETKDPQNPVIYGVFSTSSSVFRGSAVCV 346
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT-ETL-------PDSVL 194
+S+ I AF G F + + W+ ++P PRPG C ++T + L PD V+
Sbjct: 347 YSMASIRAAFNGPFAHKESPDYRWMEY-KGKIPYPRPGTCPSETYDALYKSTRDFPDDVV 405
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYE 234
+F+R+H LM E V +PVF R + + LVVD V E
Sbjct: 406 SFMRAHQLMWEPVVPIHRRPVFTRINTPYRLKKLVVDRVDAE 447
Score = 38 (18.4 bits), Expect = 4.0e-35, Sum P(2) = 4.0e-35
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 339 MAVEELDAGKYDCWLGNTVLC-THNLTVDAH 368
+ V+ D Y C + NT+ T D H
Sbjct: 916 LEVDYEDKNAYSCVINNTISNKTKQFNTDEH 946
>UNIPROTKB|C9JQ85 [details] [associations]
symbol:SEMA3F "Semaphorin-3F" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 EMBL:AC104450
HOGENOM:HOG000039964 InterPro:IPR027231 PANTHER:PTHR11036
EMBL:AC000063 UniGene:Hs.32981 HGNC:HGNC:10728 IPI:IPI00556643
ProteinModelPortal:C9JQ85 SMR:C9JQ85 STRING:C9JQ85 PRIDE:C9JQ85
Ensembl:ENST00000434342 UCSC:uc003cyk.3 ArrayExpress:C9JQ85
Bgee:C9JQ85 Uniprot:C9JQ85
Length = 754
Score = 341 (125.1 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 80/225 (35%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + + V Q + Y V F T T++ V V
Sbjct: 422 LVVRTGAPYRLTTIAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 464
Score = 71 (30.1 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D G + + R+ D+F+RT + GL++ A++ D
Sbjct: 588 GSAAFLECQPRSPQAT----VKWL-FQRDPGDRRREIRAEDRFLRT-EQGLLLRALQLSD 641
Query: 346 AGKYDC 351
G Y C
Sbjct: 642 RGLYSC 647
>UNIPROTKB|Q13275 [details] [associations]
symbol:SEMA3F "Semaphorin-3F" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0045499 "chemorepellent activity"
evidence=IDA] [GO:0005615 "extracellular space" evidence=TAS]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 GO:GO:0045499 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0048843 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 EMBL:U33920 EMBL:U38276
EMBL:AC000063 EMBL:BC042914 EMBL:U32171 EMBL:U32172 IPI:IPI00298003
PIR:G02173 RefSeq:NP_004177.3 UniGene:Hs.32981
ProteinModelPortal:Q13275 SMR:Q13275 IntAct:Q13275
MINT:MINT-1392156 STRING:Q13275 PhosphoSite:Q13275 DMDM:8134696
PaxDb:Q13275 PRIDE:Q13275 Ensembl:ENST00000002829 GeneID:6405
KEGG:hsa:6405 UCSC:uc003cyj.3 CTD:6405 GeneCards:GC03P050167
H-InvDB:HIX0204323 HGNC:HGNC:10728 HPA:HPA035008 MIM:601124
neXtProt:NX_Q13275 PharmGKB:PA35650 eggNOG:NOG320723
InParanoid:Q13275 OMA:AYNPMCT PhylomeDB:Q13275 GenomeRNAi:6405
NextBio:24886 ArrayExpress:Q13275 Bgee:Q13275 CleanEx:HS_SEMA3F
Genevestigator:Q13275 GermOnline:ENSG00000001617 Uniprot:Q13275
Length = 785
Score = 341 (125.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 80/225 (35%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + + V Q + Y V F T T++ V V
Sbjct: 453 LVVRTGAPYRLTTIAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 495
Score = 71 (30.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D G + + R+ D+F+RT + GL++ A++ D
Sbjct: 619 GSAAFLECQPRSPQAT----VKWL-FQRDPGDRRREIRAEDRFLRT-EQGLLLRALQLSD 672
Query: 346 AGKYDC 351
G Y C
Sbjct: 673 RGLYSC 678
>ZFIN|ZDB-GENE-050513-2 [details] [associations]
symbol:sema3fb "semaphorin 3fb" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-050513-2 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003598 SMART:SM00408 GO:GO:0004872 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003659 SMART:SM00423 EMBL:BX296566
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000102148 EMBL:CR854834
IPI:IPI00861931 Ensembl:ENSDART00000031441 Bgee:E7F6C0
Uniprot:E7F6C0
Length = 787
Score = 338 (124.0 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 88/254 (34%), Positives = 128/254 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E KS SR+ R+C D GG L W+T+LKARL CS+PG
Sbjct: 274 LYFFFREKSSEMGQSPKSQ-SRIGRICLNDDGGHCCLVNKWSTFLKARLICSVPGADGIE 332
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D+Y P DTK YGVF+ S + GSA+C +S+ DI F G F +
Sbjct: 333 THFDELRDVYIQPTQDTKNPVIYGVFSVSGSVFKGSAVCVYSMADIRMVFNGPFAHKEGP 392
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ + ++P PRPG C + T+ PD V+NF+R+HP M +V +P
Sbjct: 393 NYQWV-AYTGKIPYPRPGTCPGGTFTPNMKSTKDYPDEVINFMRNHPTMYNSVYPVHKRP 451
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D FT + VD +V Y V F T TV + L D T + +
Sbjct: 452 LVVRTNVDYEFTTITVD----QVTAADGNYEVLFLGTDR-GTVQKVIVLPSDDLQTEELV 506
Query: 273 CES-SVGRLKQTVT 285
E V ++ ++T
Sbjct: 507 LEEVEVFKVPTSIT 520
Score = 74 (31.1 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
+TV +G S F++ A + + W H +D + + RSD + D GL++ ++
Sbjct: 610 ETVQYGVEGS-STFLECQARSPHAAIKW-HLHRDNSDRRREVRSDGRVLKTDQGLLLRSL 667
Query: 342 EELDAGKYDC 351
+ D+G Y C
Sbjct: 668 QSSDSGIYIC 677
>UNIPROTKB|F1NS29 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9031 "Gallus gallus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0010693 "negative regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=IEA] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IEA]
[GO:0043931 "ossification involved in bone maturation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048672 "positive regulation of
collateral sprouting" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0070486 "leukocyte aggregation"
evidence=IEA] [GO:1900220 "semaphorin-plexin signaling pathway
involved in bone trabecula morphogenesis" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 GO:GO:0007275
GO:GO:0005615 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0008360 InterPro:IPR003599 SMART:SM00409
GO:GO:0014068 GO:GO:0050731 GO:GO:0030335 GO:GO:0032321
GO:GO:0004888 GO:GO:0045668 InterPro:IPR003659 SMART:SM00423
GO:GO:0031344 SUPFAM:SSF103575 GO:GO:0050732 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076864 GO:GO:0070486 OMA:IQDMSGD
EMBL:AADN02002950 EMBL:AADN02002951 EMBL:AADN02002952
EMBL:AADN02002953 IPI:IPI00592637 Ensembl:ENSGALT00000017396
ArrayExpress:F1NS29 Uniprot:F1NS29
Length = 826
Score = 360 (131.8 bits), Expect = 8.0e-35, Sum P(2) = 8.0e-35
Identities = 82/218 (37%), Positives = 123/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 217 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 275
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 276 FNIINDVFILKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 335
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 336 QSHTKWVRY-NGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 394
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P +RD+ +T +VVD V+ + GT Y V F +T
Sbjct: 395 DRPRLVKRDVKYTQIVVDRVR-ALNGTI--YDVMFIST 429
Score = 52 (23.4 bits), Expect = 8.0e-35, Sum P(2) = 8.0e-35
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 270 DSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI 329
D + E+S L+ T G + L C K +++A + W + D ++ S K+
Sbjct: 539 DKVRENS---LQHTFKHGSTAELKCSQK--SNLAQ--VVW-KFRDDV----LRVESPKY- 585
Query: 330 RTVDGGLVIMAVEELDAGKYDC 351
R ++ L+I + E D+G Y C
Sbjct: 586 RLLEKALLIFNLSEGDSGVYQC 607
Score = 38 (18.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 264 DVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPM 307
DV S E S + T T + ++ F LP ++ + M
Sbjct: 651 DVPEVSAVSTEGSTAQTSTTQTTSATSNIELFNSLPDTVPEKAM 694
>ZFIN|ZDB-GENE-070705-31 [details] [associations]
symbol:sema4ba "sema domain, immunoglobulin domain
(Ig), transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4Ba" species:7955 "Danio rerio" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-070705-31 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 EMBL:CT573123 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 EMBL:CR853284
EMBL:CT573286 IPI:IPI00800958 Ensembl:ENSDART00000042074
Bgee:E7F898 Uniprot:E7F898
Length = 827
Score = 357 (130.7 bits), Expect = 8.3e-35, Sum P(2) = 8.3e-35
Identities = 85/228 (37%), Positives = 131/228 (57%)
Query: 22 ALVMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGK 81
A V A+ ++ + + VG D ++FFF E E+ ++ SR+ARVCK D GG+
Sbjct: 225 AFVGSAYIQESLPKGNAVGDDD---KIYFFFSEAGKEFDFFDNTIVSRIARVCKGDKGGE 281
Query: 82 NILSQNWATYLKARLNCSIPGE-FPFYFNEIQDIYKV-PGDD----TKFYGVFTTST-TG 134
+L + W T+LKA+L CS+P + FPF N IQD++ + P + T FYGVFT+ G
Sbjct: 282 RVLQKKWTTFLKAQLLCSLPDDGFPF--NIIQDMFVLTPSKEDWKKTMFYGVFTSQWYKG 339
Query: 135 LMGS-AICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTET----- 188
GS A+C+F+++ +E AF G+++E T W + VPEPRPG C+ +T
Sbjct: 340 ASGSSAVCAFTMDQVEEAFNGRYREVNRETQQWY-TYNHPVPEPRPGACITNTARAQGIS 398
Query: 189 ----LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+PD VLNF++ H LMD + ++P+ +R++ +T L V VQ
Sbjct: 399 SSLHMPDRVLNFVKDHFLMDNVIR---SQPLLLKRNVRYTQLAVHRVQ 443
Score = 55 (24.4 bits), Expect = 8.3e-35, Sum P(2) = 8.3e-35
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 263 QDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIK 322
QDV + + +IC+ R + + H+ V++PA+ + R++
Sbjct: 552 QDVEDANTAICKMPSPRSGRPRV--PACHV---VEIPANTFTVLPCKLRSNLAARRWEYS 606
Query: 323 FRSDKFIR-TVDGGLVIMAVEELDAGK-YDCW 352
+++F+ + DGGLV++A ++D + Y CW
Sbjct: 607 DTAERFVYPSPDGGLVVVA--QVDRQENYACW 636
>ZFIN|ZDB-GENE-060503-381 [details] [associations]
symbol:sema4ga "sema domain, immunoglobulin domain
(Ig), transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4Ga" species:7955 "Danio rerio" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-060503-381 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
EMBL:BX248127 EMBL:BX324005 IPI:IPI00489281
Ensembl:ENSDART00000111365 Uniprot:F1RB05
Length = 839
Score = 355 (130.0 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 76/198 (38%), Positives = 114/198 (57%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E + E S +RVARVCKRD GG L + W ++LKARL CS+P ++ F
Sbjct: 218 IYFFFTEKSQELSPYFSHSRVARVARVCKRDRGGLLTLQKKWTSFLKARLVCSLP-DYEF 276
Query: 107 YFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKE-QATS 162
+FN ++ ++ + G D+ FYG+F + SAIC +S+ DI+ AF G + E + S
Sbjct: 277 HFNVLRSVFFLEGSSSQDSAFYGIFGLEWKNVKASAICQYSVSDIQWAFDGPYMESKEDS 336
Query: 163 TSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRDNK 213
S W + +VPEPRPG C+ D LPD VL+F+R HPLM + + +
Sbjct: 337 NSKWTQY-TGKVPEPRPGSCITDQHRAKGINSSINLPDDVLHFVRRHPLMYRQILPQGQR 395
Query: 214 PVFYRRDLLFTHLVVDVV 231
P+ +RR++ +T + V V
Sbjct: 396 PLLFRRNVDYTKIAVHTV 413
Score = 57 (25.1 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 28/116 (24%), Positives = 51/116 (43%)
Query: 258 KVRLLQDVSNTSD----SICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYS 313
+ L QD+ N + S + V ++V G V L C +L +++A P W
Sbjct: 519 RANLTQDIQNGNQGCDKSTADDQVLHRSRSVMAGDDVLLQC--ELSSNLAT-P-EWTLNG 574
Query: 314 KDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDCW-LGNTV---LCTHNLTV 365
+ Y + D R GL+++ + +G Y C+ + N+V + ++LTV
Sbjct: 575 NELKGYGL----DSGFRVGTDGLLVIEAQPYQSGDYCCFAIENSVRVPVLIYSLTV 626
>RGD|1310079 [details] [associations]
symbol:Sema3b "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3B" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
RGD:1310079 GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 OMA:NSLRMCR
IPI:IPI00366718 Ensembl:ENSRNOT00000022202 UCSC:RGD:1310079
ArrayExpress:D3ZPQ0 Uniprot:D3ZPQ0
Length = 745
Score = 364 (133.2 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 85/227 (37%), Positives = 122/227 (53%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 238 IYFFFRESAVEAAPAMGRMTVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 297
Query: 106 FYFNEIQDIYKVPGDD--TKF-YGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D T F Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 298 THFDQLQDVFLLSSRDRQTPFLYAVFSTSSGIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 357
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 358 THQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 416
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 417 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 459
Score = 45 (20.9 bits), Expect = 9.2e-35, Sum P(2) = 9.2e-35
Identities = 21/93 (22%), Positives = 39/93 (41%)
Query: 263 QDVSNTSDS-IC--ESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSW-YHYSKDKGR 318
QD+ N + S +C + S L + G S F++ + W +H + +
Sbjct: 551 QDIRNGNPSTLCSGDPSHSVLLERKVLGVE-RGSAFLECEPRSLQAHVEWTFHRAGEAAH 609
Query: 319 YQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
Q+ ++ RT G L++ + D+G Y C
Sbjct: 610 TQV-LAEERVERTARG-LLLRGLRRQDSGVYLC 640
>UNIPROTKB|F1MGN0 [details] [associations]
symbol:SEMA3F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048843 "negative regulation of axon extension involved
in axon guidance" evidence=IEA] [GO:0045499 "chemorepellent
activity" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003598 SMART:SM00408 GO:GO:0004872 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003659 SMART:SM00423 GO:GO:0045499
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0048843 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000102148
CTD:6405 EMBL:DAAA02054414 IPI:IPI00712015 RefSeq:XP_002697079.1
RefSeq:XP_609627.3 PRIDE:F1MGN0 Ensembl:ENSBTAT00000024362
GeneID:531141 KEGG:bta:531141 OMA:QCTATEK NextBio:20875399
Uniprot:F1MGN0
Length = 792
Score = 344 (126.2 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 80/225 (35%), Positives = 119/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE ++E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSIEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +A+ +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAIYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q + Y V F T T++ V V
Sbjct: 453 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 495
Score = 66 (28.3 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDA 346
G + L C + P + + W R + D+F+RT + GL++ A++ D+
Sbjct: 619 GSTAFLECQPRSPQAT----VKWLFQRDPSDRRREVHADDRFLRT-EQGLLLRALQSGDS 673
Query: 347 GKYDC 351
G Y C
Sbjct: 674 GLYSC 678
>UNIPROTKB|J9P0D8 [details] [associations]
symbol:SEMA3F "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003598 SMART:SM00408 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000102148
EMBL:AAEX03012223 EMBL:AAEX03012224 Ensembl:ENSCAFT00000044023
Uniprot:J9P0D8
Length = 755
Score = 342 (125.4 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 81/225 (36%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 244 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 302
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 303 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 362
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 363 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 421
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q + Y V F T T++ V V
Sbjct: 422 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 464
Score = 65 (27.9 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ A++ D
Sbjct: 588 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRALQPGD 641
Query: 346 AGKYDC 351
G Y C
Sbjct: 642 RGLYSC 647
>UNIPROTKB|F6XP73 [details] [associations]
symbol:SEMA3F "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003598 SMART:SM00408 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000102148
OMA:AYNPMCT EMBL:AAEX03012223 Ensembl:ENSCAFT00000017215
EMBL:AAEX03012224 Uniprot:F6XP73
Length = 787
Score = 342 (125.4 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 81/225 (36%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 276 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 334
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 335 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 394
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 395 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 453
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q + Y V F T T++ V V
Sbjct: 454 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 496
Score = 65 (27.9 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ A++ D
Sbjct: 620 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRALQPGD 673
Query: 346 AGKYDC 351
G Y C
Sbjct: 674 RGLYSC 679
>UNIPROTKB|F1PSB1 [details] [associations]
symbol:SEMA4D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 OMA:IQDMSGD
EMBL:AAEX03000640 EMBL:AAEX03000641 Ensembl:ENSCAFT00000003433
Uniprot:F1PSB1
Length = 971
Score = 370 (135.3 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 94/230 (40%), Positives = 126/230 (54%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKAR 95
PD V S D V+FFF E +VEY K + RVARVCK D GG L + W ++LKAR
Sbjct: 336 PDGVDSGD--DRVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKAR 393
Query: 96 LNCSIPGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAF 152
L CS P FN +QDI+ + D K FYGVFT + SA+C++++ E F
Sbjct: 394 LICSRPDN-NLVFNVLQDIFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVF 452
Query: 153 VG-KFKEQAT---STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRS 199
G K+ + AT S + W+ + VP PRPG C+N + TLPD L FI+
Sbjct: 453 SGGKYMQSATVEQSHTKWVRY-NGAVPTPRPGACINREARAANFSSSLTLPDKTLQFIKD 511
Query: 200 HPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
HPLMD +V DN+P +RD+ +T +VVD + + GT Y V F +T
Sbjct: 512 HPLMDGSVTPIDNRPRLIKRDVNYTQIVVDRTR-ALDGTV--YDVMFVST 558
Score = 40 (19.1 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 21/92 (22%), Positives = 42/92 (45%)
Query: 261 LLQDVSNTSDSICESSVGRLKQTV-TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY 319
L+Q +S + S+C + ++ G + L C K +++A + W +D+
Sbjct: 657 LVQQMSGDT-SVCPNETKSFREHFFKHGGTAELKCSQK--SNLAR--VVWTF--RDR--- 706
Query: 320 QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K ++ K+ L+I + E D+G Y C
Sbjct: 707 VLKAQTPKYGLVGRRDLLIFDLSEGDSGVYQC 738
>UNIPROTKB|O15041 [details] [associations]
symbol:SEMA3E "Semaphorin-3E" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=ISS] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=ISS] [GO:0002040 "sprouting angiogenesis"
evidence=ISS] [GO:0008360 "regulation of cell shape" evidence=ISS]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISS]
[GO:0050808 "synapse organization" evidence=ISS] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=ISS] [GO:2000249
"regulation of actin cytoskeleton reorganization" evidence=ISS]
[GO:0005615 "extracellular space" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005615 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0008360
InterPro:IPR003599 SMART:SM00409 GO:GO:0050808 GO:GO:0004872
GO:GO:2000249 GO:GO:0001953 GO:GO:0001569 GO:GO:0016525
GO:GO:0002040 InterPro:IPR003659 SMART:SM00423 InterPro:IPR013151
Pfam:PF00047 Orphanet:138 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 CTD:9723 eggNOG:NOG324739
OrthoDB:EOG4THVSM InterPro:IPR015513 PANTHER:PTHR11036:SF22
EMBL:AB002329 EMBL:AC004954 EMBL:AC079799 EMBL:AC079987
IPI:IPI00004494 RefSeq:NP_036563.1 UniGene:Hs.528721
ProteinModelPortal:O15041 SMR:O15041 MINT:MINT-4507944
STRING:O15041 PhosphoSite:O15041 PaxDb:O15041 PRIDE:O15041
Ensembl:ENST00000307792 GeneID:9723 KEGG:hsa:9723 UCSC:uc003uhy.2
GeneCards:GC07M082993 HGNC:HGNC:10727 HPA:HPA029419 MIM:608166
neXtProt:NX_O15041 PharmGKB:PA35649 InParanoid:O15041 OMA:MIPDNED
PhylomeDB:O15041 GenomeRNAi:9723 NextBio:36577 ArrayExpress:O15041
Bgee:O15041 CleanEx:HS_SEMA3E Genevestigator:O15041
GermOnline:ENSG00000170381 Uniprot:O15041
Length = 775
Score = 355 (130.0 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 94/280 (33%), Positives = 142/280 (50%)
Query: 20 QIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVA 71
++A + H + L +P FVGSY I V+FFF E A+E N ++++RV
Sbjct: 208 RLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVG 267
Query: 72 RVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYG 126
R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ +P D K +G
Sbjct: 268 RLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFG 327
Query: 127 VFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---V 183
+F T++ G AIC + + I AF G + + W V +VP PRPG C V
Sbjct: 328 LFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SVYEGKVPYPRPGSCASKV 386
Query: 184 ND-----TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVF 236
N T+ PD + F RSHPLM +A+ KP+ + D + + VD V+ E
Sbjct: 387 NGGRYGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAE-- 444
Query: 237 GTTSEYIVYFAATTTLRTVFVKVRLL--QDVSNTSDSICE 274
+Y V F T + +KV + Q++ + + I E
Sbjct: 445 --DGQYDVLFIGTDN--GIVLKVITIYNQEMESMEEVILE 480
Score = 51 (23.0 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 12/53 (22%), Positives = 29/53 (54%)
Query: 299 PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
P S+ + + + ++ + ++K D+ ++ +D GL+ + + + DAG Y C
Sbjct: 604 PRSLQAKVIWFVQKGRETRKEEVK-TDDRVVK-MDLGLLFLRLHKSDAGTYFC 654
>UNIPROTKB|E2R2Z4 [details] [associations]
symbol:SEMA3F "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003598 SMART:SM00408 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 Ensembl:ENSCAFT00000017215
Uniprot:E2R2Z4
Length = 787
Score = 340 (124.7 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 80/225 (35%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 276 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 334
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+ ++ GSA+C +S+ DI F G F +
Sbjct: 335 THFDELQDVFVQQTQDVRNPVIYAVFTSCSSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 394
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 395 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 453
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q + Y V F T T++ V V
Sbjct: 454 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 496
Score = 65 (27.9 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ A++ D
Sbjct: 620 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRALQPGD 673
Query: 346 AGKYDC 351
G Y C
Sbjct: 674 RGLYSC 679
>UNIPROTKB|F1P3L2 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 EMBL:AADN02036986 EMBL:AADN02036987
EMBL:AADN02036988 EMBL:AADN02036989 EMBL:AADN02036990
EMBL:AADN02036991 EMBL:AADN02036992 EMBL:AADN02036993
IPI:IPI00683787 Ensembl:ENSGALT00000013778 ArrayExpress:F1P3L2
Uniprot:F1P3L2
Length = 578
Score = 329 (120.9 bits), Expect = 4.7e-34, Sum P(2) = 4.7e-34
Identities = 78/227 (34%), Positives = 116/227 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFF+E + K + S +AR+C DTGG+ L W T+LKARL CS+ E
Sbjct: 67 IYFFFKERLTDNSGSTKQIHSMIARICPNDTGGQRSLVNKWTTFLKARLVCSVMDEDGTE 126
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 127 TYFDELEDVFLLETDNPRTTLVYGIFTTSSSIFKGSAVCVYHLSDIQTVFNGPFAHKEGP 186
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+P R+P PRPG C + T+ PD V+ FIR+HPLM + +P
Sbjct: 187 NHQLIPY-QGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNPIYPIHKRP 245
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R D +T + VD V Y V F T T++ V V
Sbjct: 246 LIIRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTDQGTVQKVVV 288
Score = 68 (29.0 bits), Expect = 4.7e-34, Sum P(2) = 4.7e-34
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 282 QTVTWG---QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVI 338
+TV +G + L C K P + + W + R ++K S++ I T + GL+I
Sbjct: 404 ETVQYGVKNNTTFLECTPKSPQAS----IKWLLQKDNDRRKEVKL-SERIIAT-EQGLLI 457
Query: 339 MAVEELDAGKYDC 351
+V++ D G Y C
Sbjct: 458 RSVQDSDRGLYHC 470
>UNIPROTKB|Q13214 [details] [associations]
symbol:SEMA3B "Semaphorin-3B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 EMBL:U73167 GO:GO:0005783 GO:GO:0007411 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0007267
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 eggNOG:NOG293968 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 EMBL:U28369 EMBL:AB083186
EMBL:BC009113 EMBL:BC013975 EMBL:BC024220 IPI:IPI00012283
IPI:IPI00556335 PIR:G01856 RefSeq:NP_001005914.1 RefSeq:NP_004627.1
UniGene:Hs.82222 ProteinModelPortal:Q13214 SMR:Q13214 IntAct:Q13214
STRING:Q13214 DMDM:8134673 PaxDb:Q13214 PRIDE:Q13214 DNASU:7869
GeneID:7869 KEGG:hsa:7869 UCSC:uc003cyt.3 UCSC:uc003cyu.3 CTD:7869
GeneCards:GC03P050304 HGNC:HGNC:10724 MIM:601281 neXtProt:NX_Q13214
PharmGKB:PA35646 InParanoid:Q13214 ChiTaRS:SEMA3B GenomeRNAi:7869
NextBio:30317 ArrayExpress:Q13214 CleanEx:HS_SEMA3B
Genevestigator:Q13214 GermOnline:ENSG00000012171 Uniprot:Q13214
Length = 749
Score = 362 (132.5 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 83/227 (36%), Positives = 122/227 (53%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRETAVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRETAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGD 301
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGANYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
Score = 40 (19.1 bits), Expect = 5.3e-34, Sum P(2) = 5.3e-34
Identities = 24/95 (25%), Positives = 36/95 (37%)
Query: 263 QDVSNTSDS-ICESSVGR---LKQTV--TWGQSVHLSCFVKLPASMANQPMSWYHYSKDK 316
QDV N S +C R L+ V G S L C P S+ + + W
Sbjct: 555 QDVRNGDPSTLCSGDSSRPALLEHKVFGVEGSSAFLECE---PRSLQAR-VEWTFQRAGV 610
Query: 317 GRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+ ++ RT G L++ + D+G Y C
Sbjct: 611 TAHTQVLAEERTERTARG-LLLRRLRRRDSGVYLC 644
>UNIPROTKB|F1Q4C1 [details] [associations]
symbol:SEMA3E "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 GO:GO:0016020 Gene3D:2.130.10.10 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
InterPro:IPR015513 PANTHER:PTHR11036:SF22 EMBL:AAEX03011281
EMBL:AAEX03011282 EMBL:AAEX03011283 Ensembl:ENSCAFT00000010102
Uniprot:F1Q4C1
Length = 738
Score = 343 (125.8 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 88/253 (34%), Positives = 128/253 (50%)
Query: 20 QIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVA 71
++A + H + L +P FVGSY I V+FFF E A+E N ++++RV
Sbjct: 179 RLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVG 238
Query: 72 RVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYG 126
R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K +G
Sbjct: 239 RLCVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDHKNPVIFG 298
Query: 127 VFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---V 183
+F T++ G AIC + + I AF G + + W + RVP PRPG C V
Sbjct: 299 LFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGRVPYPRPGSCASKV 357
Query: 184 ND-----TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVF 236
N T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 358 NGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGRYNLKQIAVDRVEAE-- 415
Query: 237 GTTSEYIVYFAAT 249
+Y V F T
Sbjct: 416 --DGQYDVLFIGT 426
Score = 59 (25.8 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 299 PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
P S+ + + + +D + ++K D+ ++ +D GL+ + V +DAG Y C
Sbjct: 575 PRSLQAKVIWFVQKGRDTRKEEVK-TDDRVVK-MDLGLLFLRVRTVDAGTYFC 625
>UNIPROTKB|F1SBX2 [details] [associations]
symbol:SEMA3E "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000249 "regulation of actin cytoskeleton
reorganization" evidence=IEA] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0016525 "negative regulation of angiogenesis"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0002040 "sprouting angiogenesis" evidence=IEA] [GO:0001953
"negative regulation of cell-matrix adhesion" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0008360 InterPro:IPR003599 SMART:SM00409 GO:GO:0050808
GO:GO:0004872 GO:GO:2000249 GO:GO:0001953 GO:GO:0001569
GO:GO:0016525 GO:GO:0002040 InterPro:IPR003659 SMART:SM00423
InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076660 InterPro:IPR015513
PANTHER:PTHR11036:SF22 OMA:MIPDNED EMBL:AEMK01188148 EMBL:CU972389
EMBL:FP016129 EMBL:FP101891 Ensembl:ENSSSCT00000016774
Uniprot:F1SBX2
Length = 737
Score = 341 (125.1 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 88/253 (34%), Positives = 128/253 (50%)
Query: 20 QIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVA 71
++A + H + L +P FVGSY I V+FFF E A+E N +++SRV
Sbjct: 170 RLAHIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYSRVG 229
Query: 72 RVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYG 126
R+C D GG+ IL W+T+LKARL CS+PG YF+E++DI+ + D K +G
Sbjct: 230 RICVNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDIFLLHTRDHKNPVIFG 289
Query: 127 VFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---V 183
+F T++ G AIC + + I AF G + + W + +VP PRPG C V
Sbjct: 290 LFNTTSNIFRGHAICVYHMAGIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKV 348
Query: 184 ND-----TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVF 236
N T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 349 NGGRYGTTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE-- 406
Query: 237 GTTSEYIVYFAAT 249
+Y V F T
Sbjct: 407 --DGQYDVLFIGT 417
Score = 61 (26.5 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 299 PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
P S+ + + + +D + ++K D+ ++ +D GL+ + + ++DAG Y C
Sbjct: 566 PRSLQAKVIWFVQKGRDTRKEEVK-TDDRVVK-MDLGLLFLRISKMDAGTYFC 616
>MGI|MGI:1096347 [details] [associations]
symbol:Sema3f "sema domain, immunoglobulin domain (Ig),
short basic domain, secreted, (semaphorin) 3F" species:10090 "Mus
musculus" [GO:0001755 "neural crest cell migration" evidence=IMP]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0045499
"chemorepellent activity" evidence=ISO;IDA] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=IGI;IDA] [GO:0050919 "negative chemotaxis"
evidence=IGI;IDA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 MGI:MGI:1096347 GO:GO:0007411
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0001755 InterPro:IPR003598 SMART:SM00408
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 GO:GO:0045499
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0048843
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000102148
CTD:6405 eggNOG:NOG320723 OMA:AYNPMCT EMBL:AF080090 EMBL:AF080091
EMBL:AC152718 EMBL:AC162905 EMBL:BC010976 IPI:IPI00132927
IPI:IPI00230384 RefSeq:NP_035479.2 UniGene:Mm.12903
ProteinModelPortal:O88632 SMR:O88632 STRING:O88632
PhosphoSite:O88632 PRIDE:O88632 DNASU:20350
Ensembl:ENSMUST00000080560 GeneID:20350 KEGG:mmu:20350
UCSC:uc009rms.1 UCSC:uc009rmt.1 InParanoid:O88632 OrthoDB:EOG470TGQ
ChiTaRS:SEMA3F NextBio:298203 Bgee:O88632 Genevestigator:O88632
GermOnline:ENSMUSG00000034684 Uniprot:O88632
Length = 785
Score = 340 (124.7 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 82/233 (35%), Positives = 122/233 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+R+HPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRTHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFVKVRLLQDV 265
+ R + V V Q + Y V F T T++ V V + Q+V
Sbjct: 453 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIVLPKDDQEV 503
Score = 63 (27.2 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ A++ D
Sbjct: 619 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRALQLGD 672
Query: 346 AGKYDC 351
G Y C
Sbjct: 673 RGLYSC 678
>RGD|1308514 [details] [associations]
symbol:Sema3f "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3 F" species:10116 "Rattus
norvegicus" [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA;ISO] [GO:0048843 "negative regulation of axon
extension involved in axon guidance" evidence=IEA;ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
RGD:1308514 GO:GO:0007411 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755 InterPro:IPR003598
SMART:SM00408 GO:GO:0004872 EMBL:CH473954 InterPro:IPR003659
SMART:SM00423 GO:GO:0045499 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0048843 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 CTD:6405 OMA:AYNPMCT OrthoDB:EOG470TGQ
IPI:IPI00371060 RefSeq:NP_001101655.1 UniGene:Rn.205616
Ensembl:ENSRNOT00000024193 GeneID:315996 KEGG:rno:315996
UCSC:RGD:1308514 NextBio:670219 Uniprot:D3ZGX9
Length = 785
Score = 340 (124.7 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 82/233 (35%), Positives = 122/233 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PGE
Sbjct: 275 LYFFFRERSAEAPQ-NPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+R+HPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRTHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFVKVRLLQDV 265
+ R + V V Q + Y V F T T++ V V + Q+V
Sbjct: 453 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIVLPKDDQEV 503
Score = 63 (27.2 bits), Expect = 6.5e-34, Sum P(2) = 6.5e-34
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ A++ D
Sbjct: 619 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRALQLGD 672
Query: 346 AGKYDC 351
G Y C
Sbjct: 673 RGLYSC 678
>MGI|MGI:107561 [details] [associations]
symbol:Sema3b "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3B" species:10090 "Mus
musculus" [GO:0004872 "receptor activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107561 GO:GO:0005576 GO:GO:0007399 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 EMBL:AL672219 SUPFAM:SSF103575
SUPFAM:SSF101912 eggNOG:NOG293968 HOGENOM:HOG000039964
HOVERGEN:HBG055071 InterPro:IPR027231 PANTHER:PTHR11036
ChiTaRS:SEMA3B EMBL:X85990 IPI:IPI00785481 PIR:I48744
UniGene:Mm.4083 ProteinModelPortal:Q62177 SMR:Q62177 STRING:Q62177
PRIDE:Q62177 Genevestigator:Q62177 GermOnline:ENSMUSG00000057969
Uniprot:Q62177
Length = 748
Score = 358 (131.1 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 83/227 (36%), Positives = 120/227 (52%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 241 IYFFFRESAVEAAPAMGRMSVSRVGQICRNDLGGQRSLVNKWTTFLKARLVCSVPGVEGD 300
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D + Y VF+TS+ GSA+C +S+ D+ RAF+G F +
Sbjct: 301 THFDQLQDVFLLSSRDRQTPLLYAVFSTSSGVFQGSAVCVYSMNDVRRAFLGPFAHKEGP 360
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
T W+ RVP PRPG C + T+ PD V+ F R+HPLM V +P+
Sbjct: 361 THQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPVLPMGGRPL 419
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 420 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDVGTVLKVISV 462
Score = 42 (19.8 bits), Expect = 8.8e-34, Sum P(2) = 8.8e-34
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 263 QDVSNTSDS-IC--ESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY 319
QD+ N S +C +SS L + G S F++ + W + +
Sbjct: 554 QDIRNGDPSTLCSGDSSHSVLLEKKVLGVESG-SAFLECEPRSLQAHVQWTFQGAGEAAH 612
Query: 320 QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
++ RT G L++ + D+G Y C
Sbjct: 613 TQVLAEERVERTARG-LLLRGLRRQDSGVYLC 643
>ZFIN|ZDB-GENE-990715-8 [details] [associations]
symbol:sema3h "semaphorin 3h" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-990715-8 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000102148 EMBL:BX784025
EMBL:BC162689 IPI:IPI00483486 UniGene:Dr.81274 SMR:Q1LVE1
Ensembl:ENSDART00000062515 InParanoid:Q1LVE1 OMA:STREYPD
Uniprot:Q1LVE1
Length = 749
Score = 331 (121.6 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 81/200 (40%), Positives = 112/200 (56%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+ FF E A E GK ++SRVARVCK D GG+ L W+T+ KAR+ CS+PG
Sbjct: 235 VYVFFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARIVCSVPGPDGI 294
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+++QDI+ G D K YG+FTT++ L GSA+C + ++DI RAF G F +
Sbjct: 295 QTHFDKLQDIFIQHGRDKKNPLVYGLFTTTSNVLNGSAVCVYRMQDIIRAFKGNFLHREG 354
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDT-------ETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
L + RVP PRPG C + T PD V+ F R+HPLM E V +P
Sbjct: 355 HQYK-LTEYTGRVPYPRPGTCPSSTYGGFRSTREYPDDVIFFSRTHPLMQEVVRPLGGQP 413
Query: 215 VFYRRDLLF--THLVVDVVQ 232
+ R + + T L+VD V+
Sbjct: 414 LLIRVGVPYKLTRLLVDRVE 433
Score = 70 (29.7 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 22/70 (31%), Positives = 32/70 (45%)
Query: 284 VTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEE 343
V G S +L C LP S + ++WY + Q K S + + +D G++I E
Sbjct: 577 VAVGNSTYLEC---LPKSH-HATITWYKDIGENSLEQHKVTSGEQLVVIDRGILIPRAEL 632
Query: 344 LDAGKYDCWL 353
AG Y C L
Sbjct: 633 NHAGVYHCQL 642
>UNIPROTKB|F1MYW3 [details] [associations]
symbol:SEMA3E "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000249 "regulation of actin cytoskeleton
reorganization" evidence=IEA] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IEA] [GO:0016525 "negative regulation of angiogenesis"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0002040 "sprouting angiogenesis" evidence=IEA] [GO:0001953
"negative regulation of cell-matrix adhesion" evidence=IEA]
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0008360 InterPro:IPR003599 SMART:SM00409 GO:GO:0050808
GO:GO:0004872 GO:GO:2000249 GO:GO:0001953 GO:GO:0001569
GO:GO:0016525 GO:GO:0002040 InterPro:IPR003659 SMART:SM00423
InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076660 InterPro:IPR015513
PANTHER:PTHR11036:SF22 OMA:MIPDNED EMBL:DAAA02010343
EMBL:DAAA02010344 IPI:IPI00705975 Ensembl:ENSBTAT00000019866
Uniprot:F1MYW3
Length = 737
Score = 339 (124.4 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 86/253 (33%), Positives = 128/253 (50%)
Query: 20 QIALVMCAHRYDNCL-QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVA 71
++A + H + L +P FVGSY I V+FFF E A+E N ++++RV
Sbjct: 170 RLAQIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENSAHAIYTRVG 229
Query: 72 RVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYG 126
R+C D GG+ IL W+T+LKARL CS+PG YF+E++D++ + D K +G
Sbjct: 230 RLCVNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLHTRDHKNPVIFG 289
Query: 127 VFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---V 183
+F T++ G AIC + + I AF G + + W + +VP PRPG C V
Sbjct: 290 LFNTTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKV 348
Query: 184 ND-----TETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVF 236
N T+ PD + F RSHPLM + + KP+ + D + + VD V+ E
Sbjct: 349 NGGRYETTKDYPDDAIRFARSHPLMYQPIKPAHKKPILVKTDGKYNLKQIAVDRVEAE-- 406
Query: 237 GTTSEYIVYFAAT 249
+Y V F T
Sbjct: 407 --DGQYDVLFIGT 417
Score = 61 (26.5 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 299 PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
P S+ + + + +D + ++K D+ ++ +D GL+ + V +DAG Y C
Sbjct: 566 PRSLQAKVIWFVQKGRDARKEEVK-TDDRVVK-MDLGLLFLRVRRMDAGTYFC 616
>MGI|MGI:1340034 [details] [associations]
symbol:Sema3e "sema domain, immunoglobulin domain (Ig),
short basic domain, secreted, (semaphorin) 3E" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001953 "negative
regulation of cell-matrix adhesion" evidence=IMP] [GO:0002040
"sprouting angiogenesis" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005576 "extracellular region"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IMP] [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IMP] [GO:2000249 "regulation of actin cytoskeleton
reorganization" evidence=IMP] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 MGI:MGI:1340034 GO:GO:0005576
GO:GO:0007399 GO:GO:0030154 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0008360 InterPro:IPR003599 SMART:SM00409 GO:GO:0050808
GO:GO:0004872 GO:GO:2000249 GO:GO:0001953 GO:GO:0001569
GO:GO:0016525 GO:GO:0002040 InterPro:IPR003659 SMART:SM00423
InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
CTD:9723 eggNOG:NOG324739 OrthoDB:EOG4THVSM InterPro:IPR015513
PANTHER:PTHR11036:SF22 OMA:MIPDNED EMBL:Z80941 EMBL:Z93947
EMBL:Z93948 EMBL:AF034744 EMBL:CH466635 EMBL:BC057956
IPI:IPI00785319 RefSeq:NP_035478.2 UniGene:Mm.134093
ProteinModelPortal:P70275 SMR:P70275 STRING:P70275
PhosphoSite:P70275 PRIDE:P70275 Ensembl:ENSMUST00000073957
GeneID:20349 KEGG:mmu:20349 InParanoid:Q9QX23 NextBio:298199
Bgee:P70275 Genevestigator:P70275 GermOnline:ENSMUSG00000063531
Uniprot:P70275
Length = 775
Score = 339 (124.4 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 83/239 (34%), Positives = 122/239 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG YF+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VND-----TETLPDSVL 194
+ + I AF G + + W + +VP PRPG C VN T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGTTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
Score = 61 (26.5 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 16/76 (21%), Positives = 39/76 (51%)
Query: 276 SVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
++ R ++ + +G + + P S+ + + + +D + ++K D+ ++ +D G
Sbjct: 581 ALDRTEERLAYGIESNSTLLECTPRSLQAKVIWFVQKGRDVRKEEVK-TDDRVVK-MDLG 638
Query: 336 LVIMAVEELDAGKYDC 351
L+ + V + DAG Y C
Sbjct: 639 LLFLRVRKSDAGTYFC 654
>UNIPROTKB|F1P3L3 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001974
"blood vessel remodeling" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IEA] [GO:0003350 "pulmonary myocardium
development" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0021915 "neural tube
development" evidence=IEA] [GO:0030215 "semaphorin receptor
binding" evidence=IEA] [GO:0060174 "limb bud formation"
evidence=IEA] [GO:0060666 "dichotomous subdivision of terminal
units involved in salivary gland branching" evidence=IEA]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 OMA:AEIVQYG IPI:IPI00574951
EMBL:AADN02036986 EMBL:AADN02036987 EMBL:AADN02036988
EMBL:AADN02036989 EMBL:AADN02036990 EMBL:AADN02036991
EMBL:AADN02036992 EMBL:AADN02036993 Ensembl:ENSGALT00000013777
ArrayExpress:F1P3L3 Uniprot:F1P3L3
Length = 670
Score = 329 (120.9 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 78/227 (34%), Positives = 116/227 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFF+E + K + S +AR+C DTGG+ L W T+LKARL CS+ E
Sbjct: 239 IYFFFKERLTDNSGSTKQIHSMIARICPNDTGGQRSLVNKWTTFLKARLVCSVMDEDGTE 298
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 299 TYFDELEDVFLLETDNPRTTLVYGIFTTSSSIFKGSAVCVYHLSDIQTVFNGPFAHKEGP 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+P R+P PRPG C + T+ PD V+ FIR+HPLM + +P
Sbjct: 359 NHQLIPY-QGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNPIYPIHKRP 417
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R D +T + VD V Y V F T T++ V V
Sbjct: 418 LIIRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTDQGTVQKVVV 460
Score = 68 (29.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 282 QTVTWG---QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVI 338
+TV +G + L C K P + + W + R ++K S++ I T + GL+I
Sbjct: 576 ETVQYGVKNNTTFLECTPKSPQAS----IKWLLQKDNDRRKEVKL-SERIIAT-EQGLLI 629
Query: 339 MAVEELDAGKYDC 351
+V++ D G Y C
Sbjct: 630 RSVQDSDRGLYHC 642
>MGI|MGI:109244 [details] [associations]
symbol:Sema4d "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4D" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004888 "transmembrane signaling receptor
activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=ISO;IPI] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=ISO] [GO:0010693 "negative regulation of alkaline
phosphatase activity" evidence=ISO;IDA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISO]
[GO:0016020 "membrane" evidence=TAS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IPI] [GO:0030335 "positive regulation of cell migration"
evidence=ISO;IDA] [GO:0031344 "regulation of cell projection
organization" evidence=ISO] [GO:0032321 "positive regulation of Rho
GTPase activity" evidence=ISO;IMP] [GO:0043931 "ossification
involved in bone maturation" evidence=ISO;IMP] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IMP]
[GO:0048672 "positive regulation of collateral sprouting"
evidence=ISO] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=ISO] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050772
"positive regulation of axonogenesis" evidence=IGI;IDA] [GO:0070486
"leukocyte aggregation" evidence=ISO] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=ISO] [GO:1900220
"semaphorin-plexin signaling pathway involved in bone trabecula
morphogenesis" evidence=IMP] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 MGI:MGI:109244 GO:GO:0005615 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0008360 InterPro:IPR003599 SMART:SM00409
GO:GO:0014068 GO:GO:0000122 GO:GO:0050731 GO:GO:0048814
GO:GO:0030335 GO:GO:0032321 GO:GO:0004888 GO:GO:0045668
EMBL:CH466546 InterPro:IPR003659 SMART:SM00423 GO:GO:0048672
SUPFAM:SSF103575 GO:GO:0050732 SUPFAM:SSF101912 GO:GO:0043931
GO:GO:1900220 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 KO:K06521 GeneTree:ENSGT00560000076864
eggNOG:NOG326211 OrthoDB:EOG43N7C4 CTD:10507 HOVERGEN:HBG061627
GO:GO:0070486 GO:GO:0010693 EMBL:U69535 EMBL:BC049780
IPI:IPI00114274 RefSeq:NP_038688.2 UniGene:Mm.33903
ProteinModelPortal:O09126 SMR:O09126 IntAct:O09126 STRING:O09126
PhosphoSite:O09126 PaxDb:O09126 PRIDE:O09126
Ensembl:ENSMUST00000021900 Ensembl:ENSMUST00000110039
Ensembl:ENSMUST00000110040 GeneID:20354 KEGG:mmu:20354
InParanoid:Q6GTM9 OMA:IQDMSGD ChiTaRS:SEMA4D NextBio:298221
Bgee:O09126 Genevestigator:O09126 GermOnline:ENSMUSG00000021451
Uniprot:O09126
Length = 861
Score = 354 (129.7 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 86/218 (39%), Positives = 124/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCV-------NDTETL--PDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ N T +L PD L F++ HPLMD++V D
Sbjct: 350 QSHTKWVRY-NGPVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
N+P ++D+ +T +VVD Q + GT Y V F +T
Sbjct: 409 NRPKLIKKDVNYTQIVVDRTQ-ALDGTF--YDVMFIST 443
Score = 47 (21.6 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 262 LQDVSNTSDSICESSVGRLKQTV-TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
+QD+S + S + S Q G + L CF K +++A + W + G +
Sbjct: 543 IQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQK--SNLAR--VVWKFQN---G--E 593
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K S K+ L+I + + D+G Y C
Sbjct: 594 LKAASPKYGFVGRKHLLIFNLSDGDSGVYQC 624
>UNIPROTKB|F1SPP5 [details] [associations]
symbol:SEMA3F "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048843 "negative regulation of axon extension involved
in axon guidance" evidence=IEA] [GO:0045499 "chemorepellent
activity" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007411 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003598 SMART:SM00408 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 GO:GO:0045499 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0048843 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 CTD:6405 OMA:AYNPMCT EMBL:CU468071
RefSeq:XP_001925178.2 Ensembl:ENSSSCT00000012476 GeneID:100153225
KEGG:ssc:100153225 Uniprot:F1SPP5
Length = 785
Score = 339 (124.4 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 80/225 (35%), Positives = 118/225 (52%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + E +V++R+ R+C D GG L W+T+LKARL CS+PG+
Sbjct: 275 LYFFFRERSAEAPQ-SPAVYARIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGDDGIE 333
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ D + Y VFT+S + GSA+C +S+ DI F G F +
Sbjct: 334 THFDELQDVFVQQTQDVRNPVIYAVFTSSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGP 393
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+P S ++P PRPG C + T+ PD V+NF+RSHPLM +AV +P
Sbjct: 394 NYQWMP-FSGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYQAVYPLQRRP 452
Query: 215 VFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R + V V Q + Y V F T T++ V V
Sbjct: 453 LVVRTGAPYRLTTVAVDQVDA--ADGRYEVLFLGTDRGTVQKVIV 495
Score = 59 (25.8 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS-DKFIRTVDGGLVIMAVEELD 345
G + L C + P + + W + +D + + R+ D+F+RT + GL++ ++ D
Sbjct: 619 GSAAFLECQPRSPQAT----VKWL-FQRDPSDRRREIRAEDRFLRT-EQGLLLRTLQLGD 672
Query: 346 AGKYDC 351
G Y C
Sbjct: 673 RGLYSC 678
>RGD|1310554 [details] [associations]
symbol:Sema4d "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4D" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA;ISO] [GO:0004888 "transmembrane signaling receptor
activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=ISO] [GO:0010693 "negative
regulation of alkaline phosphatase activity" evidence=ISO]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=ISO] [GO:0030335
"positive regulation of cell migration" evidence=ISO] [GO:0031344
"regulation of cell projection organization" evidence=ISO]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISO] [GO:0043931 "ossification involved in bone
maturation" evidence=ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=ISO] [GO:0048672 "positive
regulation of collateral sprouting" evidence=ISO] [GO:0048814
"regulation of dendrite morphogenesis" evidence=ISO] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=ISO] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISO] [GO:0070486 "leukocyte aggregation"
evidence=ISO] [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=ISO] [GO:1900220 "semaphorin-plexin signaling pathway
involved in bone trabecula morphogenesis" evidence=ISO]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 RGD:1310554
GO:GO:0005615 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0008360 InterPro:IPR003599 SMART:SM00409
GO:GO:0014068 GO:GO:0050731 GO:GO:0048814 GO:GO:0030335
GO:GO:0032321 GO:GO:0004888 GO:GO:0045668 InterPro:IPR003659
SMART:SM00423 GO:GO:0048672 SUPFAM:SSF103575 GO:GO:0050732
SUPFAM:SSF101912 GO:GO:0071526 GO:GO:0061383 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 OrthoDB:EOG43N7C4
GO:GO:0070486 OMA:IQDMSGD IPI:IPI00959603
Ensembl:ENSRNOT00000018378 Uniprot:D3ZYR4
Length = 862
Score = 355 (130.0 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 86/218 (39%), Positives = 124/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 289
Query: 108 FNEIQDIY--KVPG-DDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN +QD++ + PG + FY VFT + SA+C++++ +E F GK+ + AT
Sbjct: 290 FNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLSTVEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCV-------NDTETL--PDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ N T +L PD L F++ HPLMD++V D
Sbjct: 350 QSHTKWVRY-NGPVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
N+P ++D+ +T +VVD Q + GT Y V F +T
Sbjct: 409 NRPKLIKKDVNYTQIVVDRTQ-ALDGTF--YDVMFLST 443
Score = 44 (20.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 262 LQDVSNTSDSICESSVGRLKQTV-TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
+QD+S + S + S Q G + L CF K +++A + W + G +
Sbjct: 543 IQDMSGDTSSCLDKSKESFHQHFFKHGGTAELKCFQK--SNLAR--VVWKFQN---G--E 593
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K S K+ L+I + + D+G Y C
Sbjct: 594 LKAVSPKYGFVGRKHLLIFNLSDGDSGVYQC 624
>UNIPROTKB|Q90665 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0005886 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 GO:GO:0004872 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 HOVERGEN:HBG061165 EMBL:U28242 IPI:IPI00820269
UniGene:Gga.55809 ProteinModelPortal:Q90665 SMR:Q90665
STRING:Q90665 eggNOG:NOG326211 InParanoid:Q90665 OrthoDB:EOG43N7C4
Uniprot:Q90665
Length = 295
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 82/218 (37%), Positives = 123/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 4 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 62
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 63 FNIINDVFTLKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 122
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 123 QSHTKWVRY-NGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 181
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P +RD+ +T +VVD V+ + GT Y V F +T
Sbjct: 182 DRPRLVKRDVKYTQIVVDRVR-ALNGTI--YDVMFIST 216
>RGD|1310973 [details] [associations]
symbol:Sema3e "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3E" species:10116 "Rattus
norvegicus" [GO:0001569 "patterning of blood vessels"
evidence=IEA;ISO] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IEA;ISO] [GO:0002040 "sprouting angiogenesis"
evidence=IEA;ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016525 "negative
regulation of angiogenesis" evidence=IEA;ISO] [GO:0050808 "synapse
organization" evidence=IEA;ISO] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA;ISO] [GO:2000249 "regulation of
actin cytoskeleton reorganization" evidence=IEA;ISO]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 RGD:1310973 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0008360 InterPro:IPR003599 SMART:SM00409 GO:GO:0050808
GO:GO:0004872 EMBL:CH474020 GO:GO:2000249 GO:GO:0001953
GO:GO:0001569 GO:GO:0016525 GO:GO:0002040 InterPro:IPR003659
SMART:SM00423 InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0071526 KO:K06840 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 CTD:9723
OrthoDB:EOG4THVSM InterPro:IPR015513 PANTHER:PTHR11036:SF22
IPI:IPI00372614 RefSeq:NP_001100049.1 UniGene:Rn.214084
Ensembl:ENSRNOT00000008936 GeneID:296789 KEGG:rno:296789
NextBio:641802 Uniprot:D3Z8E2
Length = 775
Score = 335 (123.0 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 82/239 (34%), Positives = 122/239 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I ++FFF E A+E N ++++RV R+C D GG+ IL
Sbjct: 224 EPKFVGSYMIPDNEDPEDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNK 283
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LKARL CS+PG +F+E++D++ +P D K +G+F T++ G A+C
Sbjct: 284 WSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCV 343
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VN-----DTETLPDSVL 194
+ + I AF G + + W + +VP PRPG C VN T+ PD +
Sbjct: 344 YHMSSIREAFNGPYAHKEGPEYHW-SLYEGKVPYPRPGSCASKVNGGKYGSTKDYPDDAI 402
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAATTT 251
F R HPLM + + KP+ + D + L VD V+ E +Y V F T T
Sbjct: 403 RFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAE----DGQYDVLFIGTDT 457
Score = 61 (26.5 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 16/76 (21%), Positives = 39/76 (51%)
Query: 276 SVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
++ R ++ + +G + + P S+ + + + +D + ++K D+ ++ +D G
Sbjct: 581 ALDRTEERLAYGIESNSTLLECTPRSLQAKVVWFVQKGRDVRKEEVK-TDDRVVK-MDLG 638
Query: 336 LVIMAVEELDAGKYDC 351
L+ + V + DAG Y C
Sbjct: 639 LLFLRVRKSDAGTYFC 654
>ZFIN|ZDB-GENE-050513-1 [details] [associations]
symbol:sema3fa "semaphorin 3fa" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IGI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-050513-1 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003598 SMART:SM00408 GO:GO:0004872 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 EMBL:BX950172 IPI:IPI00508755
Ensembl:ENSDART00000046498 Ensembl:ENSDART00000129191
Uniprot:F1QPG9
Length = 801
Score = 323 (118.8 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 86/254 (33%), Positives = 125/254 (49%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE A E + SR+ R+C D GG L W+T+LKARL CS+ G
Sbjct: 285 LYFFFREKASE-MGQTPMAQSRIGRICLNDDGGHCCLVNKWSTFLKARLICSVTGSDGIE 343
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D+Y DTK YGVF+ S + GSA+C +S+ D+ F G F +
Sbjct: 344 THFDELRDVYIQKTQDTKNPVIYGVFSVSGSVFKGSAVCVYSMADVRMVFNGPFAHKEGP 403
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
W+ ++P PRPG C + T+ PD V+NF+R+HP M AV +P
Sbjct: 404 NYQWV-AYQGKIPYPRPGTCPGGTFTPNMKSTKDYPDEVINFMRTHPTMFNAVYPVHKRP 462
Query: 215 VFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D FT + VD +V Y V F T TV + L +D T + +
Sbjct: 463 LVVRTNVDYEFTTITVD----QVAAADGNYEVLFLGTDR-GTVQKVIVLPRDDLQTEELV 517
Query: 273 CES-SVGRLKQTVT 285
E V R+ ++T
Sbjct: 518 LEEVEVFRVPTSIT 531
Score = 74 (31.1 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSD-KFIRTVDGGLVIMA 340
+TV +G + F++ A + + W H+ K+ + + RSD + +RT + GL++ +
Sbjct: 621 ETVQYGVEGS-TAFLECQARSPHVSIKW-HFQKENSDRRREIRSDGRVVRT-EQGLLLRS 677
Query: 341 VEELDAGKYDC 351
++ D+G Y C
Sbjct: 678 LQLSDSGVYQC 688
>ZFIN|ZDB-GENE-050513-4 [details] [associations]
symbol:sema3gb "semaphorin 3gb" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IGI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-050513-4 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000102148 EMBL:BX248384
IPI:IPI00654496 Ensembl:ENSDART00000026316 Bgee:F1R9D6
Uniprot:F1R9D6
Length = 746
Score = 325 (119.5 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 82/243 (33%), Positives = 123/243 (50%)
Query: 48 VFFFFRETAVEYIN-CGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRE +++ SV +RV RVC D GG+ L W T+LKARL CS+ G
Sbjct: 238 LYFFFREKSLDASGGSAPSVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGADGV 297
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
YF+E++D++ D + Y VF+T+ + GSA+C +S+ DI F G F +
Sbjct: 298 ETYFDELRDVFIQRTHDERNPIVYAVFSTAGSVFKGSAVCVYSMSDIRNVFNGPFSHKHG 357
Query: 162 STSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
W P + ++P PRPG C ++ T+ D +NF+R+HPLM + + +
Sbjct: 358 HNYQWTPY-TGKIPYPRPGTCPGGTFTPDLHTTKAFSDEAVNFVRAHPLMYQPIYPIHKR 416
Query: 214 PVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
P+ R D FT + VD+V Y V F T TV + L +D+S T +
Sbjct: 417 PLVVRTGVDYRFTTIAVDLVD----AVDGRYEVLFLGTDR-GTVQKVIVLPKDISTTEEL 471
Query: 272 ICE 274
I E
Sbjct: 472 ILE 474
Score = 70 (29.7 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 279 RLKQTVTWG---QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
RL++TV +G S L C + P + + W + KD GR + R + ++T G
Sbjct: 573 RLRETVQFGVEGSSTFLECQPRSPQAT----VKWL-FQKD-GRRKALSRDKEVLKT-GHG 625
Query: 336 LVIMAVEELDAGKYDC 351
+++ ++ + DAG Y C
Sbjct: 626 ILLKSLTQSDAGLYHC 641
>UNIPROTKB|O42236 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0005576 GO:GO:0007399 GO:GO:0030154 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 CTD:10512 eggNOG:NOG247865
OrthoDB:EOG49CQ71 EMBL:AF022946 EMBL:U28241 IPI:IPI00574951
RefSeq:NP_989574.1 UniGene:Gga.43584 ProteinModelPortal:O42236
SMR:O42236 STRING:O42236 GeneID:374090 KEGG:gga:374090
InParanoid:O42236 NextBio:20813609 Uniprot:O42236
Length = 751
Score = 327 (120.2 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 71/199 (35%), Positives = 107/199 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFF+E + K + S +AR+C DTGG+ L W T+LKARL CS+ E
Sbjct: 240 IYFFFKERLTDNSGSTKQIHSMIARICPNDTGGQRSLVNKWTTFLKARLVCSVMDEDGTE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
YF+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 TYFDELEDVFLLETDNPRTTLVYGIFTTSSSIFKGSAVCVYHLSDIQTVFNGPFAHKEGP 359
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+P R+P PRPG C + T+ PD V+ FIR+HPLM + +P
Sbjct: 360 NHQLIPY-QGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNPIYPIHKRP 418
Query: 215 VFYR--RDLLFTHLVVDVV 231
+ R D +T + VD V
Sbjct: 419 LIIRIGTDYKYTKIAVDRV 437
Score = 68 (29.0 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 282 QTVTWG---QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVI 338
+TV +G + L C K P + + W + R ++K S++ I T + GL+I
Sbjct: 577 ETVQYGVKNNTTFLECTPKSPQAS----IKWLLQKDNDRRKEVKL-SERIIAT-EQGLLI 630
Query: 339 MAVEELDAGKYDC 351
+V++ D G Y C
Sbjct: 631 RSVQDSDRGLYHC 643
>UNIPROTKB|F1NCG1 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9031 "Gallus gallus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0010693 "negative regulation of alkaline
phosphatase activity" evidence=IEA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA] [GO:0030335
"positive regulation of cell migration" evidence=IEA] [GO:0032321
"positive regulation of Rho GTPase activity" evidence=IEA]
[GO:0043931 "ossification involved in bone maturation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0048672 "positive regulation of
collateral sprouting" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0070486 "leukocyte aggregation"
evidence=IEA] [GO:1900220 "semaphorin-plexin signaling pathway
involved in bone trabecula morphogenesis" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 GO:GO:0005615 GO:GO:0005887
Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0014068 GO:GO:0050731
GO:GO:0030335 GO:GO:0032321 GO:GO:0004888 GO:GO:0045668
GO:GO:0031344 SUPFAM:SSF103575 GO:GO:0050732 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076864 GO:GO:0070486 EMBL:AADN02002950
EMBL:AADN02002951 EMBL:AADN02002952 EMBL:AADN02002953
IPI:IPI01017286 Ensembl:ENSGALT00000037936 ArrayExpress:F1NCG1
Uniprot:F1NCG1
Length = 295
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 82/218 (37%), Positives = 123/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 4 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 62
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 63 FNIINDVFILKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 122
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 123 QSHTKWVRY-NGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 181
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P +RD+ +T +VVD V+ + GT Y V F +T
Sbjct: 182 DRPRLVKRDVKYTQIVVDRVR-ALNGTI--YDVMFIST 216
>ZFIN|ZDB-GENE-050513-3 [details] [associations]
symbol:sema3ga "semaphorin 3ga" species:7955 "Danio
rerio" [GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IGI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-050513-3 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 HOVERGEN:HBG055071
InterPro:IPR027231 PANTHER:PTHR11036 EMBL:AY766120 IPI:IPI00502359
RefSeq:NP_001014823.1 UniGene:Dr.87850 ProteinModelPortal:Q5ID22
GeneID:544659 KEGG:dre:544659 CTD:544659 InParanoid:Q5ID22
NextBio:20879373 Uniprot:Q5ID22
Length = 749
Score = 317 (116.6 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 85/262 (32%), Positives = 129/262 (49%)
Query: 48 VFFFFRETAVEYIN-CGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
++FFFRE +++ SV ++V RVC D GG+ L W T+LKARL CS+ G+
Sbjct: 246 LYFFFREKSLDSGGGASPSVLAKVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVMGDDGV 305
Query: 105 PFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F+E++D++ P D + YGVF+TS + GSA+C +S+ DI F G F +
Sbjct: 306 ETFFDELRDVFIQPSQDERNPIVYGVFSTSGSVFKGSAVCVYSMADIRNVFNGPFAHKHG 365
Query: 162 STSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNK 213
W + ++P PRPG C + T+ D +NFIR+HPLM V +
Sbjct: 366 HNYQWT-TYTGKIPYPRPGTCPGGTFTPGLQSTKEFSDEAVNFIRAHPLMYHPVYPIHKR 424
Query: 214 PVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDS 271
P+ R D FT + VD +V Y V F T R KV +L T +
Sbjct: 425 PLVVRSGVDYRFTTIAVD----QVDAVDGRYEVLFLGTD--RGTVQKVIVLPKDPTTMEE 478
Query: 272 ICESSVGRLKQTVTWGQSVHLS 293
+ V + +T +++H+S
Sbjct: 479 LTLEEV-EVFRTPAPVKTMHIS 499
Score = 77 (32.2 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 279 RLKQTVTWG---QSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
RLK+ V +G S L C + P + + W Y K+ GR ++ R + +RT G
Sbjct: 581 RLKEKVQFGVEGSSTFLECVPRSPQAT----IKWL-YQKE-GRRKVLNRDGEVLRTPQG- 633
Query: 336 LVIMAVEELDAGKYDC 351
+++ A+ + +AG+Y C
Sbjct: 634 VLLKALTKAEAGQYHC 649
>UNIPROTKB|F1NCF9 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
EMBL:AADN02002950 EMBL:AADN02002951 EMBL:AADN02002952
EMBL:AADN02002953 IPI:IPI00819424 Ensembl:ENSGALT00000037939
ArrayExpress:F1NCF9 Uniprot:F1NCF9
Length = 563
Score = 360 (131.8 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 82/218 (37%), Positives = 123/218 (56%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
++FFF E +VEY GK + R+ARVCKRD GG L + W ++LKARL C+IP +
Sbjct: 239 IYFFFTEVSVEYEFVGKLMIPRIARVCKRDQGGLRTLQKKWTSFLKARLICTIPDK-NLI 297
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN I D++ + K YGVFT + SA+C++++ +E F GK+ + AT
Sbjct: 298 FNIINDVFILKSPTLKEPVIYGVFTPQLNNVGLSAVCAYNLSAVEEVFSKGKYMQSATVE 357
Query: 162 -STSAWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + +P PRPG C+N+ LPD L F++ HPLMD++V
Sbjct: 358 QSHTKWVRY-NGEIPNPRPGACINNEARALNYVTSLNLPDKTLQFVKDHPLMDDSVTPVG 416
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++P +RD+ +T +VVD V+ + GT Y V F +T
Sbjct: 417 DRPRLVKRDVKYTQIVVDRVR-ALNGTI--YDVMFIST 451
>UNIPROTKB|Q5TCJ6 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 EMBL:AL135927
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 CTD:64218
HOVERGEN:HBG061165 KO:K06521 RefSeq:NP_001180231.1
UniGene:Hs.408846 DNASU:64218 GeneID:64218 KEGG:hsa:64218
HGNC:HGNC:10729 GenomeRNAi:64218 NextBio:66131 IPI:IPI00646820
SMR:Q5TCJ6 STRING:Q5TCJ6 Ensembl:ENST00000368284
Ensembl:ENST00000368286 UCSC:uc001fnn.3 Uniprot:Q5TCJ6
Length = 629
Score = 339 (124.4 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 86/220 (39%), Positives = 117/220 (53%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 101 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 160
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTS--TTGLMGSAICSFSIEDIERAF 152
C+ PG+ PF N I+ +P D Y VFT+ G SA+C+FS+ DIER F
Sbjct: 161 CTQPGQLPF--NVIRHAVLLPADSPTAPHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVF 218
Query: 153 VGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
GK+KE TS W + R PE PRPG C + D L F++ H LMDE V
Sbjct: 219 KGKYKELNKETSRWT---TYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMDEQVV-- 271
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
P+ + + +T L V+ Q + G S ++Y TT
Sbjct: 272 -GTPLLVKSGVEYTRLAVETAQ-GLDGH-SHLVMYLGTTT 308
Score = 46 (21.3 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 331 TVDGGLVIMAVEELDAGKYDCW 352
TV G +++ V++ G Y CW
Sbjct: 472 TVYNGSLLLIVQDGVGGLYQCW 493
>UNIPROTKB|E1B9T2 [details] [associations]
symbol:SEMA3B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 EMBL:DAAA02054413
IPI:IPI00712412 Ensembl:ENSBTAT00000013382 OMA:NSLRMCR
Uniprot:E1B9T2
Length = 749
Score = 345 (126.5 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 82/227 (36%), Positives = 119/227 (52%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEATPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGD 301
Query: 106 FYFNEIQDIYKVPGDDT---KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
F+++QD++ + D Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 TNFDQLQDVFLLSSRDRWTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPIGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FQQVGAGYTFTQITAD----RVAAADGYYDVLFIGTDVGTVLKVISV 463
Score = 44 (20.5 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 20/93 (21%), Positives = 35/93 (37%)
Query: 263 QDVSNTSDS-ICESSVGR---LKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR 318
QDV N S +C L+Q V + S F++ A + W +
Sbjct: 555 QDVRNGDPSTLCSGDSSHPVLLEQKVLGVEGG--SAFLECEARSLQAHVEWTFQRAGESA 612
Query: 319 YQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
Y + +++ GL++ + D+G Y C
Sbjct: 613 YTQQVPAEERAERTRRGLLLRGLRRGDSGLYLC 645
>RGD|1309343 [details] [associations]
symbol:Sema3c "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3C" species:10116 "Rattus
norvegicus" [GO:0001755 "neural crest cell migration"
evidence=IEA;ISO] [GO:0001756 "somitogenesis" evidence=IEA]
[GO:0001974 "blood vessel remodeling" evidence=IEA;ISO] [GO:0003151
"outflow tract morphogenesis" evidence=IEA] [GO:0003215 "cardiac
right ventricle morphogenesis" evidence=IEA] [GO:0003350 "pulmonary
myocardium development" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007507 "heart development" evidence=ISO] [GO:0009791
"post-embryonic development" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA;ISO] [GO:0060174 "limb bud formation" evidence=IEA]
[GO:0060666 "dichotomous subdivision of terminal units involved in
salivary gland branching" evidence=IEA;ISO] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
RGD:1309343 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0001756
GO:GO:0009791 GO:GO:0001974 GO:GO:0021915 InterPro:IPR013098
Pfam:PF07679 GO:GO:0003151 InterPro:IPR003659 SMART:SM00423
GO:GO:0060174 GO:GO:0003215 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0003350 GO:GO:0060666 InterPro:IPR027231 PANTHER:PTHR11036
OrthoDB:EOG49CQ71 IPI:IPI00951915 PRIDE:D3ZRR8
Ensembl:ENSRNOT00000066532 ArrayExpress:D3ZRR8 Uniprot:D3ZRR8
Length = 752
Score = 325 (119.5 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 83/240 (34%), Positives = 122/240 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S VAR+C DTGG+ L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKERLTDNNRSTKQIHSMVARICPNDTGGQRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKDFPDDVVTFIRNHPLMYNSIYPIHRRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D +T + VD V Y V F T R KV +L S+ S +
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTD--RGTVQKVVVLPTNSSASGEL 472
Score = 64 (27.6 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 289 SVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGK 348
S L C K P + + W KDK R + + ++ I GL+I +V++ D G
Sbjct: 587 STFLECAPKSPQAS----IKWL-LQKDKDRRKEAVKLNERIIATSQGLLIRSVQDSDQGL 641
Query: 349 YDC 351
Y C
Sbjct: 642 YHC 644
>ZFIN|ZDB-GENE-030131-5796 [details] [associations]
symbol:si:ch211-129c21.1 "si:ch211-129c21.1"
species:7955 "Danio rerio" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-030131-5796
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 EMBL:BX005201 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076864 IPI:IPI00972595
Ensembl:ENSDART00000033479 Bgee:F1QK68 Uniprot:F1QK68
Length = 791
Score = 344 (126.2 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 82/202 (40%), Positives = 112/202 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFPF 106
++ FF E A+EY K V SRVARVCK D GG L + W ++LKARL+CS+P P+
Sbjct: 232 IYMFFSENAIEYDFYNKLVVSRVARVCKGDMGGLRTLQRKWTSFLKARLDCSVPEPSLPY 291
Query: 107 YFNEIQDIYKVPGDDTK---FYGVFTTSTTGL-MGSAICSFSIEDIERAFV-GKFK-EQA 160
IQD++ V + FY +FT+ ++ SA+C++++ DI F GKFK E A
Sbjct: 292 V---IQDVFHVRHQKWRKSVFYAIFTSQSSSTDQSSAVCAYNVTDISNVFSRGKFKTEVA 348
Query: 161 TSTS--AWLPVLSSRVPEPRPGQCVNDTE---------TLPDSVLNFIRSHPLMDEAVAH 209
S W+ S +P PRPG C+N+ +PD L FIR PLMD+AV
Sbjct: 349 VEMSDVKWV-TYSGDLPVPRPGDCINNAARTSGIKSSMNIPDKTLQFIRDRPLMDDAVHP 407
Query: 210 RDNKPVFYRRDLLFTHLVVDVV 231
KP+ +R L T LVVD+V
Sbjct: 408 ITGKPLLLKRGPLLTRLVVDMV 429
Score = 45 (20.9 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
Identities = 23/100 (23%), Positives = 41/100 (41%)
Query: 254 TVFVKVRLLQDVSNTSDSICE--SSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYH 311
T K L+Q + + + C + + +T+ G ++ L C P S Q ++W
Sbjct: 533 TEHAKSNLIQSLKDGDATQCPITAPIEPKVRTLVLGNNIRLLC---RPDSNLAQ-VNWNL 588
Query: 312 YSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
K + F + K+ D ++I DAG+Y C
Sbjct: 589 AGKP-----LPFSNRKYTIYNDA-ILISNASSADAGRYTC 622
>MGI|MGI:107557 [details] [associations]
symbol:Sema3c "sema domain, immunoglobulin domain (Ig), short
basic domain, secreted, (semaphorin) 3C" species:10090 "Mus
musculus" [GO:0001755 "neural crest cell migration" evidence=IMP]
[GO:0001974 "blood vessel remodeling" evidence=IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IDA] [GO:0007507
"heart development" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030215
"semaphorin receptor binding" evidence=IPI] [GO:0060666
"dichotomous subdivision of terminal units involved in salivary
gland branching" evidence=IDA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107557 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0001756
GO:GO:0009791 GO:GO:0001974 GO:GO:0021915 InterPro:IPR013098
Pfam:PF07679 GO:GO:0003151 InterPro:IPR003659 SMART:SM00423
GO:GO:0060174 GO:GO:0003215 EMBL:CH466586 SUPFAM:SSF103575
SUPFAM:SSF101912 GO:GO:0003350 GO:GO:0060666 HOGENOM:HOG000039964
HOVERGEN:HBG055071 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
CTD:10512 eggNOG:NOG247865 GeneTree:ENSGT00690000102148 OMA:AEIVQYG
OrthoDB:EOG49CQ71 EMBL:X85994 EMBL:BC066852 IPI:IPI00311104
PIR:I48748 RefSeq:NP_038685.3 UniGene:Mm.5071
ProteinModelPortal:Q62181 SMR:Q62181 STRING:Q62181
PhosphoSite:Q62181 PRIDE:Q62181 Ensembl:ENSMUST00000030568
GeneID:20348 KEGG:mmu:20348 InParanoid:Q6NXW7 NextBio:298195
Bgee:Q62181 Genevestigator:Q62181 GermOnline:ENSMUSG00000028780
Uniprot:Q62181
Length = 751
Score = 324 (119.1 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 82/240 (34%), Positives = 122/240 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG+ L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKERLTDNNRSTKQIHSMIARICPNDTGGQRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKDFPDDVVTFIRNHPLMYNSIYPIHRRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D +T + VD V Y V F T R KV +L S+ S +
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTD--RGTVQKVVVLPTNSSASGEL 472
Score = 64 (27.6 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 289 SVHLSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C K P + + W KDK R ++K +++ I T G L+I +V++ D G
Sbjct: 587 STFLECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQDSDQG 639
Query: 348 KYDC 351
Y C
Sbjct: 640 LYHC 643
>UNIPROTKB|Q5TCJ5 [details] [associations]
symbol:SEMA4A "cDNA FLJ75147" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0010594
"regulation of endothelial cell migration" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0045063 "T-helper 1 cell differentiation" evidence=IEA]
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0008360
GO:GO:0004872 GO:GO:0007409 GO:GO:0016525 InterPro:IPR003659
SMART:SM00423 GO:GO:0010594 GO:GO:0045063 SUPFAM:SSF103575
EMBL:AL135927 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 HOGENOM:HOG000116087 HOVERGEN:HBG061165
UniGene:Hs.408846 HGNC:HGNC:10729 EMBL:AK290353 IPI:IPI00640907
SMR:Q5TCJ5 STRING:Q5TCJ5 Ensembl:ENST00000368283 Uniprot:Q5TCJ5
Length = 723
Score = 339 (124.4 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 86/220 (39%), Positives = 117/220 (53%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 195 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 254
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTS--TTGLMGSAICSFSIEDIERAF 152
C+ PG+ PF N I+ +P D Y VFT+ G SA+C+FS+ DIER F
Sbjct: 255 CTQPGQLPF--NVIRHAVLLPADSPTAPHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVF 312
Query: 153 VGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
GK+KE TS W + R PE PRPG C + D L F++ H LMDE V
Sbjct: 313 KGKYKELNKETSRWT---TYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMDEQVV-- 365
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
P+ + + +T L V+ Q + G S ++Y TT
Sbjct: 366 -GTPLLVKSGVEYTRLAVETAQ-GLDGH-SHLVMYLGTTT 402
Score = 46 (21.3 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 331 TVDGGLVIMAVEELDAGKYDCW 352
TV G +++ V++ G Y CW
Sbjct: 566 TVYNGSLLLIVQDGVGGLYQCW 587
>UNIPROTKB|F1NQ93 [details] [associations]
symbol:SEMA3G "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
OMA:TEHNSTF EMBL:AADN02056432 IPI:IPI00585935
Ensembl:ENSGALT00000007127 Uniprot:F1NQ93
Length = 659
Score = 322 (118.4 bits), Expect = 3.8e-32, Sum P(2) = 3.8e-32
Identities = 80/242 (33%), Positives = 123/242 (50%)
Query: 49 FFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FPF 106
+FFF E VE + ++ SRVARVC D GG+ +L W+T+ KARL CS+PG
Sbjct: 135 YFFFTEKVVEADSKEHTIVSRVARVCVNDAGGQRVLVNKWSTFNKARLVCSVPGPGGIDT 194
Query: 107 YFNEIQDIYKV---PGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
+F+E++D++ + G + + Y +F+T + GSA+C + + DI F G F + +
Sbjct: 195 HFDELEDVFLLRTKDGKNPEIYALFSTVSHVFQGSAVCVYRMADIREVFNGPFAHRDSPL 254
Query: 164 SAWLPVLSSRVPEPRPGQC-----------VNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
W RVP PRPG C + T+ LPD VL+F R+HPLM AV R +
Sbjct: 255 HQW-GAYEGRVPYPRPGVCPSKTTNQPRRPYSSTKELPDEVLHFARAHPLMYRAVRPRHH 313
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+P+ + DL ++ +V V ++ V F T + V V Q + T + +
Sbjct: 314 RPLLVKTDL--QQRLLQLVVDRVDTEDGQHDVLFLGTDAGSVLKVVVLQKQSSAVTEEVV 371
Query: 273 CE 274
E
Sbjct: 372 LE 373
Score = 61 (26.5 bits), Expect = 3.8e-32, Sum P(2) = 3.8e-32
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 259 VRLLQDVSNTSD-SICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWY-HYSKDK 316
VR V D ++ + +++ V +G H S F++ + W+ D+
Sbjct: 449 VRHTSSVHQCLDQNLTVDDLEHVEEKVLYGME-HNSTFLECVPRSPQASVQWFVQRPPDE 507
Query: 317 GRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
R ++K +D+ + + GL+ + DAG Y C
Sbjct: 508 QRDEVK--TDERVLQTEQGLLFRQLHRRDAGVYYC 540
>UNIPROTKB|Q9H3S1 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0010594 "regulation of endothelial cell migration"
evidence=IEA] [GO:0016525 "negative regulation of angiogenesis"
evidence=IEA] [GO:0045063 "T-helper 1 cell differentiation"
evidence=IEA] [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0005886 Reactome:REACT_111045 GO:GO:0007411
Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0004872 GO:GO:0001525
Orphanet:1872 Orphanet:791 GO:GO:0016525 InterPro:IPR003659
SMART:SM00423 GO:GO:0010594 GO:GO:0045063 SUPFAM:SSF103575
EMBL:AL135927 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 CTD:64218 eggNOG:NOG287504 HOGENOM:HOG000116087
HOVERGEN:HBG061165 KO:K06521 OrthoDB:EOG40CHGB EMBL:AB029394
EMBL:AY358531 EMBL:AK315547 EMBL:BC020974 IPI:IPI00149097
RefSeq:NP_001180229.1 RefSeq:NP_001180230.1 RefSeq:NP_001180231.1
RefSeq:NP_071762.2 UniGene:Hs.408846 ProteinModelPortal:Q9H3S1
SMR:Q9H3S1 IntAct:Q9H3S1 MINT:MINT-4507832 STRING:Q9H3S1
PhosphoSite:Q9H3S1 DMDM:29840871 PaxDb:Q9H3S1 PRIDE:Q9H3S1
DNASU:64218 Ensembl:ENST00000355014 Ensembl:ENST00000368282
Ensembl:ENST00000368285 GeneID:64218 KEGG:hsa:64218 UCSC:uc001fnl.3
GeneCards:GC01P156119 HGNC:HGNC:10729 MIM:607292 MIM:610282
MIM:610283 neXtProt:NX_Q9H3S1 PharmGKB:PA35651 InParanoid:Q9H3S1
OMA:FAFSPAC PhylomeDB:Q9H3S1 GenomeRNAi:64218 NextBio:66131
ArrayExpress:Q9H3S1 Bgee:Q9H3S1 CleanEx:HS_SEMA4A
Genevestigator:Q9H3S1 GermOnline:ENSG00000196189 Uniprot:Q9H3S1
Length = 761
Score = 339 (124.4 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 86/220 (39%), Positives = 117/220 (53%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 233 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTS--TTGLMGSAICSFSIEDIERAF 152
C+ PG+ PF N I+ +P D Y VFT+ G SA+C+FS+ DIER F
Sbjct: 293 CTQPGQLPF--NVIRHAVLLPADSPTAPHIYAVFTSQWQVGGTRSSAVCAFSLLDIERVF 350
Query: 153 VGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHR 210
GK+KE TS W + R PE PRPG C + D L F++ H LMDE V
Sbjct: 351 KGKYKELNKETSRWT---TYRGPETNPRPGSCSVGPSS--DKALTFMKDHFLMDEQVV-- 403
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
P+ + + +T L V+ Q + G S ++Y TT
Sbjct: 404 -GTPLLVKSGVEYTRLAVETAQ-GLDGH-SHLVMYLGTTT 440
Score = 46 (21.3 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 331 TVDGGLVIMAVEELDAGKYDCW 352
TV G +++ V++ G Y CW
Sbjct: 604 TVYNGSLLLIVQDGVGGLYQCW 625
>WB|WBGene00004889 [details] [associations]
symbol:smp-1 species:6239 "Caenorhabditis elegans"
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 EMBL:AL032653 SUPFAM:SSF101912
eggNOG:NOG293968 InterPro:IPR027231 PANTHER:PTHR11036 EMBL:U15667
PIR:T27165 RefSeq:NP_493582.3 ProteinModelPortal:Q17330 SMR:Q17330
PaxDb:Q17330 PRIDE:Q17330 EnsemblMetazoa:Y54E5B.1a GeneID:173351
KEGG:cel:CELE_Y54E5B.1 UCSC:Y54E5B.1b.1 CTD:173351
WormBase:Y54E5B.1a GeneTree:ENSGT00690000101974
HOGENOM:HOG000021724 InParanoid:Q17330 OMA:KTHVYAC NextBio:879279
ArrayExpress:Q17330 Uniprot:Q17330
Length = 712
Score = 357 (130.7 bits), Expect = 7.5e-32, P = 7.5e-32
Identities = 72/179 (40%), Positives = 109/179 (60%)
Query: 36 PDFVGSYDIGKYVFFFFRETAVEYINCGKS--VFSRVARVCKRDTGGKNILSQNWATYLK 93
P+FV ++ ++V+F+FRE A E I+ + +++RVARVCK D GG ++ W +YLK
Sbjct: 222 PNFVATFAYKEHVYFWFREIASEAIDNNEEPQIYARVARVCKNDKGGARPANERWTSYLK 281
Query: 94 ARLNCSIP-GEFPFYFNEIQ---DIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIE 149
ARLNCS+P G PFYFNE++ D ++ Y VF+T + + SA+C FS++ I
Sbjct: 282 ARLNCSLPSGSSPFYFNELKAVSDPIDAGNNNHVVYTVFSTPDSDVRMSAVCKFSMKKIR 341
Query: 150 RAFV-GKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
F G FK Q + S W+ + VP+PRPG C D+ LP++ ++FI HPL+ +
Sbjct: 342 EEFDNGTFKHQNNAQSMWMAFNRNEVPKPRPGSCSPDSTKLPENTVSFILHHPLLHRPI 400
>UNIPROTKB|F1SIW2 [details] [associations]
symbol:SEMA3G "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 InterPro:IPR013151 Pfam:PF00047
SUPFAM:SSF103575 SUPFAM:SSF101912 KO:K06840 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 CTD:56920
OMA:TEHNSTF EMBL:CU550676 RefSeq:XP_001928286.1
Ensembl:ENSSSCT00000012520 GeneID:100157653 KEGG:ssc:100157653
Uniprot:F1SIW2
Length = 771
Score = 294 (108.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 87/246 (35%), Positives = 123/246 (50%)
Query: 48 VFFFFRETAVEYINCGKS--VFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE-- 103
V+FFF ET V + G S SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 241 VYFFFSET-VPSPDGGLSRVTVSRVGRVCMNDMGGQRVLVNKWSTFLKARLLCSVPGPGG 299
Query: 104 FPFYFNEIQDIYKV-P--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQA 160
+FN+++D++ + P G + Y +F+ +T G A+C + + DI F G F Q
Sbjct: 300 AETHFNQLEDVFLLWPSAGKSLEVYALFSMVSTVFQGYAVCVYHMADIWEVFKGPFAHQD 359
Query: 161 TSTSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAH 209
W P +VP PRPG C + T+ PD VL F R+HPLM V
Sbjct: 360 GPQHQWRPY-GGKVPFPRPGMCPSKMTSQPGRPFGSTKDYPDEVLQFARAHPLMFRPVRP 418
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAATTTLRTVFVKVRLLQDVS 266
++PV L+ THL + Q V +E Y V F T + +V +KV LQ+ S
Sbjct: 419 WRDRPV-----LVKTHLAQQLRQIVVDRVEAEDGTYDVIFLGTDS-GSV-LKVIALQEGS 471
Query: 267 NTSDSI 272
+ +
Sbjct: 472 AEPEEV 477
Score = 89 (36.4 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 262 LQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSK-DKGRY 319
LQ + + D E + G + T +G H S F++ LP S + W+ S+ D+G
Sbjct: 568 LQCLGQSQD---EEAAGLVAATTVYGTE-HNSTFLECLPKS-PQATVHWFLQSRGDEGPN 622
Query: 320 QIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
Q+K +D+ + + GL+ + LDAG Y C
Sbjct: 623 QVK--TDERVLQTEQGLLFRRLNRLDAGTYTC 652
>UNIPROTKB|E2R0R3 [details] [associations]
symbol:SEMA3C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060666 "dichotomous subdivision of terminal
units involved in salivary gland branching" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0030215
"semaphorin receptor binding" evidence=IEA] [GO:0021915 "neural
tube development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0003350 "pulmonary myocardium development" evidence=IEA]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=IEA]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0001974
"blood vessel remodeling" evidence=IEA] [GO:0001756 "somitogenesis"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 GO:GO:0001756 GO:GO:0009791
GO:GO:0001974 GO:GO:0021915 InterPro:IPR013098 Pfam:PF07679
GO:GO:0003151 InterPro:IPR003659 SMART:SM00423 GO:GO:0060174
GO:GO:0003215 SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0003350
GO:GO:0060666 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
CTD:10512 GeneTree:ENSGT00690000102148 OMA:AEIVQYG
EMBL:AAEX03011267 EMBL:AAEX03011268 RefSeq:XP_533139.2
Ensembl:ENSCAFT00000010317 GeneID:475930 KEGG:cfa:475930
Uniprot:E2R0R3
Length = 750
Score = 320 (117.7 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 80/227 (35%), Positives = 117/227 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKEKLTDNSRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM +V +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSVYPIHRRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R D +T + VD V Y V F T T++ V V
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTDRGTVQKVVV 461
Score = 61 (26.5 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350
L C K P + + W KDK R ++K +++ I T G L+I +V++ D G Y
Sbjct: 590 LECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQDSDQGLYH 642
Query: 351 C 351
C
Sbjct: 643 C 643
>UNIPROTKB|E2QYF5 [details] [associations]
symbol:SEMA3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
EMBL:AAEX03012222 EMBL:AAEX03012223 Ensembl:ENSCAFT00000017070
Uniprot:E2QYF5
Length = 718
Score = 355 (130.0 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 84/227 (37%), Positives = 120/227 (52%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGD 301
Query: 106 FYFNEIQDIYKVPGDDT---KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VFTTS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSLRDRWSPLLYTVFTTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>UNIPROTKB|J9P5R7 [details] [associations]
symbol:SEMA3B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
EMBL:AAEX03012222 EMBL:AAEX03012223 Ensembl:ENSCAFT00000046833
Uniprot:J9P5R7
Length = 743
Score = 355 (130.0 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 84/227 (37%), Positives = 120/227 (52%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGAEGD 301
Query: 106 FYFNEIQDIYKVPGDDT---KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+++QD++ + D Y VFTTS+T GSA+C +S+ D+ RAF+G F +
Sbjct: 302 THFDQLQDVFLLSLRDRWSPLLYTVFTTSSTIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 MHQWVSY-QGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQITAD----RVAAADGHYDVLFIGTDVGTVLKVISV 463
>UNIPROTKB|Q92854 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9606 "Homo sapiens"
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031344 "regulation
of cell projection organization" evidence=IMP] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0070486 "leukocyte aggregation"
evidence=IMP] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0030335 "positive regulation of
cell migration" evidence=ISS;IDA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IMP] [GO:0048672
"positive regulation of collateral sprouting" evidence=IMP]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS;IMP] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0004872 "receptor activity" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0043931 "ossification involved in bone maturation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0010693
"negative regulation of alkaline phosphatase activity"
evidence=IMP] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISS] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=ISS] [GO:0050732
"negative regulation of peptidyl-tyrosine phosphorylation"
evidence=ISS] [GO:1900220 "semaphorin-plexin signaling pathway
involved in bone trabecula morphogenesis" evidence=ISS] [GO:0030215
"semaphorin receptor binding" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0043066 GO:GO:0005615 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0006955 Gene3D:2.130.10.10 GO:GO:0008360
InterPro:IPR003599 SMART:SM00409 GO:GO:0014068 GO:GO:0000122
GO:GO:0050731 GO:GO:0048814 GO:GO:0030335 GO:GO:0032321
GO:GO:0004888 GO:GO:0045668 InterPro:IPR003659 SMART:SM00423
GO:GO:0048672 InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575
GO:GO:0050732 SUPFAM:SSF101912 PDB:3OL2 PDBsum:3OL2 GO:GO:0030215
GO:GO:0043931 GO:GO:1900220 InterPro:IPR027231 PANTHER:PTHR11036
EMBL:AL929575 KO:K06521 eggNOG:NOG326211 EMBL:U60800 EMBL:AL590233
EMBL:BC054500 EMBL:BC137515 EMBL:BC137518 EMBL:AK097056
IPI:IPI00023807 IPI:IPI00915390 RefSeq:NP_001135759.1
RefSeq:NP_006369.3 UniGene:Hs.494406 PDB:1OLZ PDBsum:1OLZ
ProteinModelPortal:Q92854 SMR:Q92854 DIP:DIP-59221N IntAct:Q92854
STRING:Q92854 PhosphoSite:Q92854 DMDM:8134701 PaxDb:Q92854
PeptideAtlas:Q92854 PRIDE:Q92854 Ensembl:ENST00000339861
Ensembl:ENST00000343780 Ensembl:ENST00000356444
Ensembl:ENST00000420101 Ensembl:ENST00000420987
Ensembl:ENST00000422704 Ensembl:ENST00000438547
Ensembl:ENST00000450295 Ensembl:ENST00000455551 GeneID:10507
KEGG:hsa:10507 UCSC:uc004aqo.1 UCSC:uc011ltm.1 CTD:10507
GeneCards:GC09M091975 HGNC:HGNC:10732 HPA:HPA015662 HPA:HPA023277
MIM:601866 neXtProt:NX_Q92854 PharmGKB:PA35654 HOGENOM:HOG000111669
HOVERGEN:HBG061627 InParanoid:Q8N8B0 OMA:FCQATGP PhylomeDB:Q92854
EvolutionaryTrace:Q92854 GenomeRNAi:10507 NextBio:39858
ArrayExpress:Q92854 Bgee:Q92854 CleanEx:HS_SEMA4D
Genevestigator:Q92854 GermOnline:ENSG00000187764 GO:GO:0070486
GO:GO:0010693 Uniprot:Q92854
Length = 862
Score = 336 (123.3 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 81/218 (37%), Positives = 122/218 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY + + R+ARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFRVLIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSGLV 289
Query: 108 FNEIQDIY--KVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN ++D++ + PG FY +FT + SA+C++++ E F GK+ + T
Sbjct: 290 FNVLRDVFVLRSPGLKVPVFYALFTPQLNNVGLSAVCAYNLSTAEEVFSHGKYMQSTTVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCV-------NDTETL--PDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP+PRPG C+ N T +L PD L F++ HPLMD++V D
Sbjct: 350 QSHTKWVRY-NGPVPKPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
N+P ++D+ +T +VVD Q + GT Y V F +T
Sbjct: 409 NRPRLIKKDVNYTQIVVDRTQ-ALDGTV--YDVMFVST 443
Score = 46 (21.3 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 261 LLQDVSNTSDSIC-ESSVGRLKQTV-TWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR 318
L+Q++S + S+C + S G +Q G + L C K +++A + W + G
Sbjct: 542 LIQEMSGDA-SVCPDKSKGSYRQHFFKHGGTAELKCSQK--SNLAR--VFWKFQN---G- 592
Query: 319 YQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K S K+ L+I + E D+G Y C
Sbjct: 593 -VLKAESPKYGLMGRKNLLIFNLSEGDSGVYQC 624
>UNIPROTKB|H9L251 [details] [associations]
symbol:H9L251 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048843
"negative regulation of axon extension involved in axon guidance"
evidence=IEA] InterPro:IPR001627 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000102148
OMA:QCTATEK EMBL:AADN02014605 EMBL:AADN02014606 EMBL:AADN02057536
EMBL:AADN02057537 Ensembl:ENSGALT00000035766 Uniprot:H9L251
Length = 710
Score = 340 (124.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 86/232 (37%), Positives = 123/232 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + V+SR+ R+C D GG L W+T+LKARL CS+PG
Sbjct: 207 LYFFFREKSAD-APLSPGVYSRIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGPDGIE 265
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ DTK Y VF+ S + GSA+C +S+ DI F G F +
Sbjct: 266 THFDELQDVFIQQTQDTKNPVIYAVFSASGSVFKGSAVCVYSMADIRMVFNGPFAHKEGP 325
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAV--AHRDN 212
W+P + ++P PRPG C + T+ PD V+NF+RSHPLM AV AHR
Sbjct: 326 NYQWMPY-TGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYHAVYPAHR-- 382
Query: 213 KPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFVKVR 260
+P+ R ++ FT + VD +V Y V F T T++ V V R
Sbjct: 383 QPLVVRTNVNYRFTTIAVD----QVDAADGRYEVLFLGTDRGTVQKVIVLPR 430
Score = 37 (18.1 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 307 MSWYHYSKDKGRYQIKFRSDKFIRTV 332
+ W H+ K++ R +++ + TV
Sbjct: 593 VGWLHWEKEEHRLKMEGNGGGWXHTV 618
>UNIPROTKB|A7MB70 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9913 "Bos taurus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISS] [GO:0060666 "dichotomous subdivision of
terminal units involved in salivary gland branching" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0030215
"semaphorin receptor binding" evidence=IEA] [GO:0021915 "neural
tube development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0003350 "pulmonary myocardium development"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0001755
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 GO:GO:0001756
GO:GO:0009791 GO:GO:0001974 GO:GO:0021915 InterPro:IPR013098
Pfam:PF07679 GO:GO:0003151 InterPro:IPR003659 SMART:SM00423
GO:GO:0060174 GO:GO:0003215 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0003350 GO:GO:0060666 HOGENOM:HOG000039964 HOVERGEN:HBG055071
KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036 EMBL:BC151369
IPI:IPI00705638 RefSeq:NP_001094552.1 UniGene:Bt.103869
ProteinModelPortal:A7MB70 PRIDE:A7MB70 Ensembl:ENSBTAT00000008076
GeneID:512660 KEGG:bta:512660 CTD:10512 eggNOG:NOG247865
GeneTree:ENSGT00690000102148 InParanoid:A7MB70 OMA:AEIVQYG
OrthoDB:EOG49CQ71 NextBio:20870493 Uniprot:A7MB70
Length = 751
Score = 318 (117.0 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 86/242 (35%), Positives = 123/242 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKEKLTDNSRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + DI+ F G F +
Sbjct: 300 THFDELEDVFLLEMDNPRTTLVYGIFTTSSSVFKGSAVCVYHFSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPVHRRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D +T + VD V GT Y V F T TV V L + S S+ I
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN-AADGT---YNVLFLGTDR-GTVQKVVVLPTNSSARSELI 473
Query: 273 CE 274
E
Sbjct: 474 LE 475
Score = 61 (26.5 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350
L C K P + + W KDK R ++K +++ I T G L+I +V++ D G Y
Sbjct: 590 LECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQDSDQGLYH 642
Query: 351 C 351
C
Sbjct: 643 C 643
>UNIPROTKB|F1SPP4 [details] [associations]
symbol:SEMA3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 KO:K06840 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076660 CTD:7869 OMA:NSLRMCR EMBL:CU468071
RefSeq:XP_001927890.1 UniGene:Ssc.60275 Ensembl:ENSSSCT00000012478
GeneID:100153200 KEGG:ssc:100153200 Uniprot:F1SPP4
Length = 747
Score = 353 (129.3 bits), Expect = 2.3e-31, P = 2.3e-31
Identities = 83/227 (36%), Positives = 119/227 (52%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFP 105
++FFFRE+AVE G+ SRV ++C+ D GG+ L W T+LKARL CS+PG E
Sbjct: 242 IYFFFRESAVEATPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGTEGD 301
Query: 106 FYFNEIQDIYKVPGDDT---KFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
FN++QD++ + D Y VF+TS++ GSA+C +S+ D+ RAF+G F +
Sbjct: 302 TNFNQLQDVFLLSSRDRWTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGP 361
Query: 163 TSAWLPVLSSRVPEPRPGQCVN-------DTETLPDSVLNFIRSHPLMDEAVAHRDNKPV 215
W+ RVP PRPG C + T+ PD V+ F R+HPLM +V +P+
Sbjct: 362 LHQWVSY-QGRVPYPRPGMCPSKTFGTFTSTKDFPDDVIQFARNHPLMYNSVLPMGGRPL 420
Query: 216 FYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT---TTLRTVFV 257
F + FT + D V Y V F T T L+ + V
Sbjct: 421 FLQVGAGYTFTQIAAD----RVAAADGHYDVLFIGTDAGTVLKVISV 463
>RGD|1304636 [details] [associations]
symbol:Sema4a "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4A" species:10116 "Rattus norvegicus" [GO:0002292 "T
cell differentiation involved in immune response" evidence=ISO]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008360 "regulation of cell
shape" evidence=IEA;ISO] [GO:0010594 "regulation of endothelial
cell migration" evidence=IEA;ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IEA;ISO] [GO:0045063 "T-helper 1 cell
differentiation" evidence=IEA;ISO] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA;ISO] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630 RGD:1304636
GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0004872
GO:GO:0007409 GO:GO:0016525 InterPro:IPR003659 SMART:SM00423
GO:GO:0010594 GO:GO:0045063 SUPFAM:SSF103575 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036 CTD:64218
eggNOG:NOG287504 HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
OrthoDB:EOG40CHGB OMA:FAFSPAC GeneTree:ENSGT00560000076864
EMBL:BC081943 IPI:IPI00368612 RefSeq:NP_001012078.2
UniGene:Rn.54039 STRING:Q66HA9 Ensembl:ENSRNOT00000056862
GeneID:310630 KEGG:rno:310630 UCSC:RGD:1304636 InParanoid:Q66HA9
NextBio:662255 Genevestigator:Q66HA9 Uniprot:Q66HA9
Length = 760
Score = 353 (129.3 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 87/225 (38%), Positives = 121/225 (53%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
L PD FV + + V+FFF ETA E+ + SRVA+VCK D GG+ +L + W T+
Sbjct: 227 LHPDASFVAAIPSTQVVYFFFEETASEFDFFEELYTSRVAQVCKNDVGGEKLLQKKWTTF 286
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGDDT---KFYGVFTTS--TTGLMGSAICSFSIE 146
LKA+L C+ PG+ PF N I+ +P D + Y VFT+ G SA+C+FS+
Sbjct: 287 LKAQLLCAQPGQLPF--NIIRHAVLLPADSPSVPRIYAVFTSQWQVGGTRSSAVCAFSLT 344
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DIER F GK+KE TS W S V PRPG C + D L F++ H LMDE
Sbjct: 345 DIERVFKGKYKELNKETSRWTTYRGSEV-NPRPGSCSMGPSS--DKALTFMKDHFLMDEH 401
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
V P+ + + +T L V+ Q + G S ++V + T+T
Sbjct: 402 VV---GAPLLVKSGVEYTQLAVETAQ-GLDG--SSHVVLYLGTST 440
>UNIPROTKB|Q5RE75 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9601 "Pongo abelii"
[GO:0007411 "axon guidance" evidence=ISS] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007411 GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 CTD:10512 EMBL:CR857661
RefSeq:NP_001124906.1 UniGene:Pab.19391 HSSP:O08665
ProteinModelPortal:Q5RE75 PRIDE:Q5RE75 GeneID:100171774
KEGG:pon:100171774 Uniprot:Q5RE75
Length = 751
Score = 321 (118.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 82/240 (34%), Positives = 121/240 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPVHKRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSI 272
+ R D +T + VD V Y V F T R KV +L S+ S +
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTD--RGTVQKVVVLPTNSSVSGEL 472
Score = 57 (25.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350
L C K P + + W KDK R ++K +++ I T G L+I +V+ D G Y
Sbjct: 590 LECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQGSDQGLYH 642
Query: 351 C 351
C
Sbjct: 643 C 643
>ZFIN|ZDB-GENE-080303-16 [details] [associations]
symbol:sc:d411 "sc:d411" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-080303-16 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
OMA:YNASHLY EMBL:BX927201 EMBL:CR392037 IPI:IPI00627121
Ensembl:ENSDART00000113037 Bgee:F1QF70 Uniprot:F1QF70
Length = 863
Score = 328 (120.5 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 75/197 (38%), Positives = 107/197 (54%)
Query: 48 VFFFFRETAVEYINCGKSV-FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E AVE ++C + +RVARVCK D GG L + W T+ KARL CS P E
Sbjct: 236 IYFFFSERAVE-LDCDSDLTVARVARVCKGDLGGTRTLQKKWTTFQKARLMCSFP-ERHI 293
Query: 107 YFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
FN ++ ++ +PG D T FYG+F + SA+C + I +++ F G +KE S+
Sbjct: 294 TFNNLRAVFTLPGADWRTTSFYGIFHAQWGDVDVSAVCQYQIGEVKNVFDGPYKEYRESS 353
Query: 164 SAWLPVLSSRVPEPRPGQCVN--DTET-------LPDSVLNFIRSHPLMDEAVAHRDNKP 214
W + VP PRPG C+ D E LPD+ LNF + HPLM+ + +P
Sbjct: 354 QRW-GRYTGTVPSPRPGACITNFDRENGYNSSLQLPDATLNFAKKHPLME---LRAEARP 409
Query: 215 VFYRRDLLFTHLVVDVV 231
+ + + FT L VD V
Sbjct: 410 LLLTKGINFTRLAVDRV 426
Score = 52 (23.4 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 24/83 (28%), Positives = 37/83 (44%)
Query: 271 SICESSVGRLKQ-TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFI 329
SI RL+ TV G + L C L +++A QP W ++ + + +F
Sbjct: 559 SIPSPDHSRLRNVTVVVGSDLVLPC--NLVSNLA-QPF-WELNERELALVEGEAIGPRFD 614
Query: 330 RTVDGGLVIMAVEELDAGKYDCW 352
R + LVI L AG+Y C+
Sbjct: 615 RALRA-LVIPQAGSLQAGRYICY 636
>UNIPROTKB|F1NF47 [details] [associations]
symbol:SEMA3E "Semaphorin-3E" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IEA] [GO:0002040 "sprouting angiogenesis"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=IEA] [GO:2000249
"regulation of actin cytoskeleton reorganization" evidence=IEA]
InterPro:IPR001627 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS51004 SMART:SM00630 GO:GO:0007275
GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0008360 InterPro:IPR003599
SMART:SM00409 GO:GO:0050808 GO:GO:0004872 GO:GO:2000249
GO:GO:0001953 GO:GO:0016525 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 InterPro:IPR015513
PANTHER:PTHR11036:SF22 EMBL:AADN02037163 EMBL:AADN02037164
EMBL:AADN02037165 EMBL:AADN02037166 EMBL:AADN02037167
EMBL:AADN02037168 EMBL:AADN02037169 EMBL:AADN02037170
EMBL:AADN02037171 EMBL:AADN02037172 EMBL:AADN02037173
EMBL:AADN02037174 EMBL:AADN02037175 EMBL:AADN02037176
EMBL:AADN02037177 EMBL:AADN02037178 EMBL:AADN02037179
IPI:IPI00819576 Ensembl:ENSGALT00000030758 Uniprot:F1NF47
Length = 592
Score = 316 (116.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 78/237 (32%), Positives = 121/237 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E ++++RV RVC D GG+ +L
Sbjct: 41 EPKFVGSYMIPDNEDHDDNKVYFFFTEKALEAETSTHAIYTRVGRVCVNDMGGQRMLVNK 100
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LK RL CS+PG +F+E++D++ + D K +G+F+T++ G AIC
Sbjct: 101 WSTFLKTRLVCSVPGRNGIDTHFDELEDVFLLQTRDNKNPVIFGLFSTTSNIFRGYAICV 160
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VND-----TETLPDSVL 194
+ + + AF G + + W + +VP PRPG C VN T+ PD +
Sbjct: 161 YHMASVRAAFNGPYAHKEGPEYHWA-LYEGKVPYPRPGSCASKVNGGLYTTTKDYPDEAV 219
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
+F RSHPLM + + +P+ + D + + VD V+ E +Y V F T
Sbjct: 220 HFARSHPLMYQPIKPVHKRPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGT 272
Score = 56 (24.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 272 ICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT 331
+ E + RL + + ++ L C P ++ + + + + + + ++K +D+ I
Sbjct: 398 VLEKTEERLVYGIEYNSTL-LEC---TPRTLQAKVIWFVQRAHETKKEEVK--TDERIIK 451
Query: 332 VDGGLVIMAVEELDAGKYDC 351
+D GL+ + + LDAG Y C
Sbjct: 452 MDLGLLFLKLHRLDAGTYFC 471
>UNIPROTKB|F1NNM9 [details] [associations]
symbol:F1NNM9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 OMA:KTHVYAC
GeneTree:ENSGT00690000102148 EMBL:AADN02056478 EMBL:AADN02056479
IPI:IPI00582790 Ensembl:ENSGALT00000005073 Uniprot:F1NNM9
Length = 678
Score = 323 (118.8 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 90/264 (34%), Positives = 137/264 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKS-VFSRVARVCKRDTGGKNILSQ 86
+P FVG++ I V+ FFRETA+E + + +RVARVCK D GGK L
Sbjct: 221 EPTFVGAFAIPDTHNPHDDKVYVFFRETALEGGQWERRHIHARVARVCKNDVGGKRGLIN 280
Query: 87 NWATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAIC 141
W+T+LKARL CSIPG +F++++D++ + D + +G+FT S+ GSA+C
Sbjct: 281 RWSTFLKARLLCSIPGPQGTQTHFDQLEDVFLLHTRDPQNPLVFGLFTASSAVFSGSAVC 340
Query: 142 SFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDT--------ETLPDSV 193
+S+ + AF G F + W+ RVP PRPG C ++T + PD V
Sbjct: 341 VYSMAAVRAAFSGPFAHKEGFDHRWVQY-KGRVPYPRPGTCPSETYDPLLRSTKDFPDEV 399
Query: 194 LNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLR 253
++F+R+H LM E + +PV R ++ + + V + E G Y V F T +
Sbjct: 400 ISFVRAHQLMWEPIRPLGRRPVLLRANVPYRLRQLLVHRLEAEGR--HYDVLFLGTDDGK 457
Query: 254 TVFVKVRLLQDVSNTSDSICESSV 277
+ KV L +V + S+ E SV
Sbjct: 458 VL--KVGLPGEVGAEAVSLEEISV 479
Score = 52 (23.4 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 293 SCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
S F++ A + W + +G + RS + ++ GL+I + DAG Y+C
Sbjct: 585 STFLECRARSPQTAVRWLA-RRGEGPGLSEVRSGGRVAVLEQGLLIRQLGREDAGTYEC 642
>UNIPROTKB|E2RK68 [details] [associations]
symbol:SEMA3G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 OMA:TEHNSTF
EMBL:AAEX03012197 Ensembl:ENSCAFT00000015081 Uniprot:E2RK68
Length = 773
Score = 295 (108.9 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 86/246 (34%), Positives = 120/246 (48%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+FFF ET G SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 243 VYFFFSETVPSPDGGPGHVTVSRVGRVCVNDAGGQRVLVNKWSTFLKARLVCSVPGPGGA 302
Query: 105 PFYFNEIQDIYKV-P--GDDTKFYGVFTT-STTGLMGSAICSFSIEDIERAFVGKFKEQA 160
+F++++D++ + P G + Y +F+T S+ G A+C + +EDI F G F Q
Sbjct: 303 ETHFDQLEDVFLLWPSTGKTLEVYALFSTVSSAVFQGFAVCVYHMEDIWEVFKGPFAHQD 362
Query: 161 TSTSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAH 209
W P +VP PRPG C + T+ PD VL F R+HPLM V
Sbjct: 363 GPQHQWGPY-GGKVPFPRPGVCPSKMTAQPGRPFGSTKNYPDEVLQFARAHPLMFRPVRP 421
Query: 210 RDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAATTTLRTVFVKVRLLQDVS 266
R +PV L+ THL + Q V +E Y V F T + +V + L S
Sbjct: 422 RLGRPV-----LVKTHLAQQLRQIVVDRVQAEDGTYDVIFLGTDS-GSVLKVIALQGGDS 475
Query: 267 NTSDSI 272
TS+ +
Sbjct: 476 TTSEEV 481
Score = 82 (33.9 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 274 ESSVGRLKQTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTV 332
E + G + T +G H S F++ LP S + + W+ + GR + ++D+ +
Sbjct: 581 EEAAGPMAATTVYGTE-HNSTFLECLPKS-SQAVVRWF-LQRPGGRGPDQVKTDERVLQT 637
Query: 333 DGGLVIMAVEELDAGKYDC 351
D GL+ + LDAG Y C
Sbjct: 638 DQGLLFRRLSLLDAGTYTC 656
>UNIPROTKB|Q99985 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001974
"blood vessel remodeling" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IEA] [GO:0003350 "pulmonary myocardium
development" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0021915 "neural tube development" evidence=IEA]
[GO:0030215 "semaphorin receptor binding" evidence=IEA] [GO:0060174
"limb bud formation" evidence=IEA] [GO:0060666 "dichotomous
subdivision of terminal units involved in salivary gland branching"
evidence=IEA] [GO:0007411 "axon guidance" evidence=ISS] [GO:0006955
"immune response" evidence=TAS] [GO:0042493 "response to drug"
evidence=TAS] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007411 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006955 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0042493 GO:GO:0001755 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 GO:GO:0001756 GO:GO:0009791
GO:GO:0001974 GO:GO:0021915 InterPro:IPR013098 Pfam:PF07679
GO:GO:0003151 InterPro:IPR003659 SMART:SM00423 GO:GO:0060174
GO:GO:0003215 SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0003350
GO:GO:0060666 HOVERGEN:HBG055071 KO:K06840 InterPro:IPR027231
PANTHER:PTHR11036 CTD:10512 eggNOG:NOG247865 OrthoDB:EOG49CQ71
EMBL:AB000220 EMBL:BC030690 IPI:IPI01014918 RefSeq:NP_006370.1
UniGene:Hs.269109 ProteinModelPortal:Q99985 SMR:Q99985
STRING:Q99985 PhosphoSite:Q99985 DMDM:8134685 PaxDb:Q99985
PeptideAtlas:Q99985 PRIDE:Q99985 DNASU:10512
Ensembl:ENST00000265361 Ensembl:ENST00000419255 GeneID:10512
KEGG:hsa:10512 UCSC:uc003uhj.3 GeneCards:GC07M080371
HGNC:HGNC:10725 HPA:HPA042418 MIM:602645 neXtProt:NX_Q99985
PharmGKB:PA35647 InParanoid:Q99985 PhylomeDB:Q99985 ChiTaRS:SEMA3C
GenomeRNAi:10512 NextBio:39868 ArrayExpress:Q99985 Bgee:Q99985
CleanEx:HS_SEMA3C Genevestigator:Q99985 GermOnline:ENSG00000075223
Uniprot:Q99985
Length = 751
Score = 318 (117.0 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 79/227 (34%), Positives = 117/227 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG L W T+LKARL CS+ E P
Sbjct: 240 VYFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPE 299
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 300 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 358
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 359 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRP 418
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R D +T + VD V Y V F T T++ V V
Sbjct: 419 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTDRGTVQKVVV 461
Score = 57 (25.1 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350
L C K P + + W KDK R ++K +++ I T G L+I +V+ D G Y
Sbjct: 590 LECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQGSDQGLYH 642
Query: 351 C 351
C
Sbjct: 643 C 643
>UNIPROTKB|F5H1Z7 [details] [associations]
symbol:SEMA3C "Semaphorin-3C" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 OMA:AEIVQYG
HGNC:HGNC:10725 ChiTaRS:SEMA3C EMBL:AC073850 EMBL:AC004880
EMBL:AC004972 EMBL:AC093683 IPI:IPI00019209
ProteinModelPortal:F5H1Z7 SMR:F5H1Z7 Ensembl:ENST00000544525
UCSC:uc011kgw.2 ArrayExpress:F5H1Z7 Bgee:F5H1Z7 Uniprot:F5H1Z7
Length = 769
Score = 318 (117.0 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 79/227 (34%), Positives = 117/227 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF-P- 105
V+FFF+E + K + S +AR+C DTGG L W T+LKARL CS+ E P
Sbjct: 258 VYFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPE 317
Query: 106 FYFNEIQDIYKVPGDD---TKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E++D++ + D+ T YG+FTTS++ GSA+C + + DI+ F G F +
Sbjct: 318 THFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKE-G 376
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAVAHRDNKP 214
+ L R+P PRPG C + T+ PD V+ FIR+HPLM ++ +P
Sbjct: 377 PNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHKRP 436
Query: 215 VFYR--RDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFV 257
+ R D +T + VD V Y V F T T++ V V
Sbjct: 437 LIVRIGTDYKYTKIAVDRVN----AADGRYHVLFLGTDRGTVQKVVV 479
Score = 57 (25.1 bits), Expect = 6.0e-31, Sum P(2) = 6.0e-31
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRY-QIKFRSDKFIRTVDGGLVIMAVEELDAGKYD 350
L C K P + + W KDK R ++K +++ I T G L+I +V+ D G Y
Sbjct: 608 LECAPKSPQAS----IKWL-LQKDKDRRKEVKL-NERIIATSQG-LLIRSVQGSDQGLYH 660
Query: 351 C 351
C
Sbjct: 661 C 661
>UNIPROTKB|K7GR88 [details] [associations]
symbol:SEMA4D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003659 SMART:SM00423 InterPro:IPR013151 Pfam:PF00047
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 EMBL:CU469368
RefSeq:XP_001928494.1 Ensembl:ENSSSCT00000033105 GeneID:100152598
Uniprot:K7GR88
Length = 865
Score = 339 (124.4 bits), Expect = 6.8e-31, Sum P(2) = 6.8e-31
Identities = 81/218 (37%), Positives = 120/218 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLLIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 289
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN ++D++ + D K FYGVFT + SA+C++++ E F GK+ + AT
Sbjct: 290 FNVLRDVFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ + + LPD L F++ HPLMD++V D
Sbjct: 350 QSHTKWVRY-NGAVPTPRPGACITREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P + D+ +T +VVD + + GT + V F +T
Sbjct: 409 GRPRLIKSDVNYTQIVVDRT-WALDGTVHD--VMFVST 443
Score = 37 (18.1 bits), Expect = 6.8e-31, Sum P(2) = 6.8e-31
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K S K+ L+I + E D+G Y C
Sbjct: 594 LKAESPKYSLVGRKNLLIFNLSEGDSGVYLC 624
>UNIPROTKB|F1RN15 [details] [associations]
symbol:SEMA4D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:1900220 "semaphorin-plexin signaling pathway involved
in bone trabecula morphogenesis" evidence=IEA] [GO:0070486
"leukocyte aggregation" evidence=IEA] [GO:0050732 "negative
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IEA] [GO:0048672 "positive regulation of
collateral sprouting" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0043931
"ossification involved in bone maturation" evidence=IEA]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030215 "semaphorin receptor binding"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0010693
"negative regulation of alkaline phosphatase activity"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0005615 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.10 GO:GO:0008360
InterPro:IPR003599 SMART:SM00409 GO:GO:0014068 GO:GO:0050731
GO:GO:0048814 GO:GO:0030335 GO:GO:0032321 GO:GO:0004888
GO:GO:0045668 InterPro:IPR003659 SMART:SM00423 GO:GO:0048672
InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575 GO:GO:0050732
SUPFAM:SSF101912 GO:GO:0071526 GO:GO:0061383 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 GO:GO:0070486
OMA:IQDMSGD EMBL:CU469368 Ensembl:ENSSSCT00000010505 Uniprot:F1RN15
Length = 873
Score = 339 (124.4 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 81/218 (37%), Positives = 120/218 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 239 VYFFFTEVSVEYEFVFKLLIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 297
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN ++D++ + D K FYGVFT + SA+C++++ E F GK+ + AT
Sbjct: 298 FNVLRDVFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 357
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ + + LPD L F++ HPLMD++V D
Sbjct: 358 QSHTKWVRY-NGAVPTPRPGACITREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPID 416
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P + D+ +T +VVD + + GT + V F +T
Sbjct: 417 GRPRLIKSDVNYTQIVVDRT-WALDGTVHD--VMFVST 451
Score = 37 (18.1 bits), Expect = 7.1e-31, Sum P(2) = 7.1e-31
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 321 IKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+K S K+ L+I + E D+G Y C
Sbjct: 602 LKAESPKYSLVGRKNLLIFNLSEGDSGVYLC 632
>UNIPROTKB|F1P0S7 [details] [associations]
symbol:SEMA3E "Semaphorin-3E" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0001953 "negative regulation of cell-matrix
adhesion" evidence=IEA] [GO:0002040 "sprouting angiogenesis"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0050808 "synapse organization" evidence=IEA] [GO:0071526
"semaphorin-plexin signaling pathway" evidence=IEA] [GO:2000249
"regulation of actin cytoskeleton reorganization" evidence=IEA]
InterPro:IPR001627 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS51004 SMART:SM00630 GO:GO:0007275
GO:GO:0016020 Gene3D:2.130.10.10 GO:GO:0008360 InterPro:IPR003599
SMART:SM00409 GO:GO:0050808 GO:GO:0004872 GO:GO:2000249
GO:GO:0001953 GO:GO:0016525 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 IPI:IPI00598668
InterPro:IPR015513 PANTHER:PTHR11036:SF22 OMA:MIPDNED
EMBL:AADN02037163 EMBL:AADN02037164 EMBL:AADN02037165
EMBL:AADN02037166 EMBL:AADN02037167 EMBL:AADN02037168
EMBL:AADN02037169 EMBL:AADN02037170 EMBL:AADN02037171
EMBL:AADN02037172 EMBL:AADN02037173 EMBL:AADN02037174
EMBL:AADN02037175 EMBL:AADN02037176 EMBL:AADN02037177
EMBL:AADN02037178 EMBL:AADN02037179 Ensembl:ENSGALT00000013861
Uniprot:F1P0S7
Length = 779
Score = 316 (116.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 78/237 (32%), Positives = 121/237 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+FFF E A+E ++++RV RVC D GG+ +L
Sbjct: 228 EPKFVGSYMIPDNEDHDDNKVYFFFTEKALEAETSTHAIYTRVGRVCVNDMGGQRMLVNK 287
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LK RL CS+PG +F+E++D++ + D K +G+F+T++ G AIC
Sbjct: 288 WSTFLKTRLVCSVPGRNGIDTHFDELEDVFLLQTRDNKNPVIFGLFSTTSNIFRGYAICV 347
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VND-----TETLPDSVL 194
+ + + AF G + + W + +VP PRPG C VN T+ PD +
Sbjct: 348 YHMASVRAAFNGPYAHKEGPEYHWA-LYEGKVPYPRPGSCASKVNGGLYTTTKDYPDEAV 406
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
+F RSHPLM + + +P+ + D + + VD V+ E +Y V F T
Sbjct: 407 HFARSHPLMYQPIKPVHKRPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGT 459
Score = 56 (24.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 272 ICESSVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRT 331
+ E + RL + + ++ L C P ++ + + + + + + ++K +D+ I
Sbjct: 585 VLEKTEERLVYGIEYNSTL-LEC---TPRTLQAKVIWFVQRAHETKKEEVK--TDERIIK 638
Query: 332 VDGGLVIMAVEELDAGKYDC 351
+D GL+ + + LDAG Y C
Sbjct: 639 MDLGLLFLKLHRLDAGTYFC 658
>MGI|MGI:107560 [details] [associations]
symbol:Sema4a "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4A" species:10090 "Mus musculus" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0002292 "T cell differentiation
involved in immune response" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008360 "regulation of cell shape"
evidence=IDA] [GO:0010594 "regulation of endothelial cell
migration" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0045063 "T-helper 1 cell
differentiation" evidence=IMP] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IDA;IMP] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107560 GO:GO:0016021 GO:GO:0005886 Gene3D:2.130.10.10
GO:GO:0008360 GO:GO:0004872 GO:GO:0001525 GO:GO:0007409
GO:GO:0016525 InterPro:IPR003659 SMART:SM00423 GO:GO:0010594
EMBL:CH466547 GO:GO:0045063 SUPFAM:SSF103575 SUPFAM:SSF101912
EMBL:AC102388 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
CTD:64218 eggNOG:NOG287504 HOGENOM:HOG000116087 HOVERGEN:HBG061165
KO:K06521 OrthoDB:EOG40CHGB OMA:FAFSPAC EMBL:X85991 IPI:IPI00122316
PIR:I48745 RefSeq:NP_001156961.1 RefSeq:NP_001156962.1
RefSeq:NP_001156963.1 RefSeq:NP_038686.3 UniGene:Mm.439752
ProteinModelPortal:Q62178 SMR:Q62178 STRING:Q62178
PhosphoSite:Q62178 PaxDb:Q62178 PRIDE:Q62178
Ensembl:ENSMUST00000029700 Ensembl:ENSMUST00000165898
Ensembl:ENSMUST00000166237 Ensembl:ENSMUST00000169222 GeneID:20351
KEGG:mmu:20351 GeneTree:ENSGT00560000076864 ChiTaRS:SEMA4A
NextBio:298207 Bgee:Q62178 Genevestigator:Q62178
GermOnline:ENSMUSG00000028064 Uniprot:Q62178
Length = 760
Score = 345 (126.5 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 83/219 (37%), Positives = 119/219 (54%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVA+VCK D GG+ +L + W T+LKA+L
Sbjct: 233 FVAAIPSTQVVYFFFEETASEFDFFEELYISRVAQVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 98 CSIPGEFPFYFNEIQDIYKVPGDD---TKFYGVFTTS--TTGLMGSAICSFSIEDIERAF 152
C+ PG+ PF N I+ +P D ++ Y VFT+ G SA+C+FS+ DIER F
Sbjct: 293 CAQPGQLPF--NIIRHAVLLPADSPSVSRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVF 350
Query: 153 VGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDN 212
GK+KE TS W S V PRPG C + D L F++ H LMDE V
Sbjct: 351 KGKYKELNKETSRWTTYRGSEV-SPRPGSCSMGPSS--DKALTFMKDHFLMDEHVV---G 404
Query: 213 KPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
P+ + + +T L V+ + + G S ++V + T+T
Sbjct: 405 TPLLVKSGVEYTRLAVESAR-GLDG--SSHVVMYLGTST 440
>UNIPROTKB|G3MYK9 [details] [associations]
symbol:SEMA3G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
OMA:TEHNSTF EMBL:DAAA02054374 Ensembl:ENSBTAT00000065486
Uniprot:G3MYK9
Length = 775
Score = 296 (109.3 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 80/222 (36%), Positives = 109/222 (49%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG--EF 104
V+FFF ET G+ SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 244 VYFFFSETVPSPDGGPGRVTISRVGRVCVNDAGGQRVLVNKWSTFLKARLLCSVPGPGSA 303
Query: 105 PFYFNEIQDIYKV-P--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F++++D++ + P G + Y +F+T + G AIC + + DI F G F Q
Sbjct: 304 ETHFDQLEDVFLLWPNSGKSLEVYALFSTVSAVFQGYAICVYHMADIWEVFKGPFAHQDG 363
Query: 162 STSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAHR 210
W P +VP PRPG C + T+ PD VL F R+HPLM V R
Sbjct: 364 PQHQWGPY-GGKVPFPRPGMCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFRPVRPR 422
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAAT 249
+PV L+ THL + Q V +E Y V F T
Sbjct: 423 RGRPV-----LVKTHLAQQLRQIVVDRVEAEDGTYDVIFLGT 459
Score = 74 (31.1 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 274 ESSVGRLKQTVTWG---QSVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFI 329
E + G + T +G S L C K P + A+ W+ D+ Q+K +D+ +
Sbjct: 581 EETAGLVATTTVYGTEHNSTFLECLPKSPQAAAH----WFLQRPGDERPEQVK--TDERV 634
Query: 330 RTVDGGLVIMAVEELDAGKYDC 351
+ GL+ + LDAG Y C
Sbjct: 635 LQTEQGLLFRRLNRLDAGTYTC 656
>UNIPROTKB|Q9NPR2 [details] [associations]
symbol:SEMA4B "Semaphorin-4B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007399
GO:GO:0030154 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 EMBL:AC091167 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 HOVERGEN:HBG061165
EMBL:AY445887 EMBL:AB051532 EMBL:AY358392 EMBL:AL390080
EMBL:AL390081 EMBL:AL390082 EMBL:AK026133 EMBL:BC010701
EMBL:BC017658 IPI:IPI00419724 IPI:IPI00513964 UniGene:Hs.474935
ProteinModelPortal:Q9NPR2 SMR:Q9NPR2 STRING:Q9NPR2 DMDM:29840873
PaxDb:Q9NPR2 PRIDE:Q9NPR2 Ensembl:ENST00000379122 UCSC:uc002boy.3
GeneCards:GC15P090703 HGNC:HGNC:10730 HPA:HPA013372
neXtProt:NX_Q9NPR2 eggNOG:NOG241642 InParanoid:Q9NPR2
OrthoDB:EOG4CNQQF ArrayExpress:Q9NPR2 Bgee:Q9NPR2 CleanEx:HS_SEMA4B
Genevestigator:Q9NPR2 GermOnline:ENSG00000185033 Uniprot:Q9NPR2
Length = 832
Score = 344 (126.2 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 82/194 (42%), Positives = 114/194 (58%)
Query: 36 PDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ +GS D K ++FFF ET E+ ++ SR+AR+CK D GG+ +L Q W ++LK
Sbjct: 242 PESLGSLQGDDDK-IYFFFSETGQEFEFFENTIVSRIARICKGDEGGERVLQQRWTSFLK 300
Query: 94 ARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKFYGVFTTST-TGLM-GSAICSFSI 145
A+L CS P + FPF N +QD++ + P D DT FYGVFT+ G GSA+C F++
Sbjct: 301 AQLLCSRPDDGFPF--NVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRGTTEGSAVCVFTM 358
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNF 196
+D++R F G +KE T W V + VP PRPG C+ N + LPD VLNF
Sbjct: 359 KDVQRVFSGLYKEVNRETQQWYTV-THPVPTPRPGACITNSARERKINSSLQLPDRVLNF 417
Query: 197 IRSHPLMDEAVAHR 210
++ H LMD V R
Sbjct: 418 LKDHFLMDGQVRSR 431
>UNIPROTKB|J3KNP4 [details] [associations]
symbol:SEMA4B "Semaphorin-4B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 EMBL:AC091167 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 KO:K06521
UniGene:Hs.474935 HGNC:HGNC:10730 CTD:10509 OMA:NLATRLW
RefSeq:NP_064595.2 RefSeq:NP_945119.1 ProteinModelPortal:J3KNP4
Ensembl:ENST00000332496 Ensembl:ENST00000411539 GeneID:10509
KEGG:hsa:10509 PhylomeDB:J3KNP4 Uniprot:J3KNP4
Length = 837
Score = 344 (126.2 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 82/194 (42%), Positives = 114/194 (58%)
Query: 36 PDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ +GS D K ++FFF ET E+ ++ SR+AR+CK D GG+ +L Q W ++LK
Sbjct: 247 PESLGSLQGDDDK-IYFFFSETGQEFEFFENTIVSRIARICKGDEGGERVLQQRWTSFLK 305
Query: 94 ARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKFYGVFTTST-TGLM-GSAICSFSI 145
A+L CS P + FPF N +QD++ + P D DT FYGVFT+ G GSA+C F++
Sbjct: 306 AQLLCSRPDDGFPF--NVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRGTTEGSAVCVFTM 363
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNF 196
+D++R F G +KE T W V + VP PRPG C+ N + LPD VLNF
Sbjct: 364 KDVQRVFSGLYKEVNRETQQWYTV-THPVPTPRPGACITNSARERKINSSLQLPDRVLNF 422
Query: 197 IRSHPLMDEAVAHR 210
++ H LMD V R
Sbjct: 423 LKDHFLMDGQVRSR 436
>UNIPROTKB|A5D7C8 [details] [associations]
symbol:SEMA4D "SEMA4D protein" species:9913 "Bos taurus"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:1900220
"semaphorin-plexin signaling pathway involved in bone trabecula
morphogenesis" evidence=IEA] [GO:0070486 "leukocyte aggregation"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048672
"positive regulation of collateral sprouting" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0043931 "ossification involved in bone
maturation" evidence=IEA] [GO:0032321 "positive regulation of Rho
GTPase activity" evidence=IEA] [GO:0030335 "positive regulation of
cell migration" evidence=IEA] [GO:0030215 "semaphorin receptor
binding" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0010693
"negative regulation of alkaline phosphatase activity"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0005615 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
GO:GO:0008360 GO:GO:0014068 GO:GO:0050731 GO:GO:0048814
GO:GO:0030335 GO:GO:0032321 GO:GO:0004888 GO:GO:0045668
InterPro:IPR003659 SMART:SM00423 GO:GO:0048672 SUPFAM:SSF103575
GO:GO:0050732 SUPFAM:SSF101912 GO:GO:0071526 GO:GO:0061383
InterPro:IPR027231 PANTHER:PTHR11036 HOGENOM:HOG000116087
HOVERGEN:HBG061165 KO:K06521 GeneTree:ENSGT00560000076864
eggNOG:NOG326211 CTD:10507 OMA:FCQATGP GO:GO:0070486
EMBL:DAAA02024214 EMBL:DAAA02024215 EMBL:BC140509 IPI:IPI00852449
RefSeq:NP_001091629.1 UniGene:Bt.103001 SMR:A5D7C8 STRING:A5D7C8
Ensembl:ENSBTAT00000002525 GeneID:785942 KEGG:bta:785942
NextBio:20927598 Uniprot:A5D7C8
Length = 735
Score = 342 (125.4 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 83/224 (37%), Positives = 124/224 (55%)
Query: 43 DIGK-YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP 101
D+G V+FFF E +VEY K + R+ARVCK D GG L + W ++LKARL CS P
Sbjct: 225 DLGDDRVYFFFTEVSVEYEFVFKLMIPRIARVCKGDQGGLRTLQKKWTSFLKARLICSRP 284
Query: 102 GEFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFK 157
+ FN ++D++ + D K FYGVFT + SA+C++++ E F GK+
Sbjct: 285 -DSNLVFNVLRDVFVLRSADLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYM 343
Query: 158 EQAT---STSAWLPVLSSRVPEPRPGQCVN---------DTETLPDSVLNFIRSHPLMDE 205
+ AT S + W+ + VP PRPG C+N + LPD L F++ HPLMD+
Sbjct: 344 QSATVEQSHTKWVRY-NGAVPTPRPGACINREARAANFSSSLNLPDKTLQFVKDHPLMDD 402
Query: 206 AVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+V D++P + D+ +T +VVD + + GT + V F +T
Sbjct: 403 SVTPIDSRPRLIKGDVNYTQIVVDRAR-ALDGTIHD--VMFVST 443
>UNIPROTKB|F1MY79 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9913 "Bos taurus"
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IEA]
[GO:0045063 "T-helper 1 cell differentiation" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0010594 "regulation of endothelial cell migration"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 Gene3D:2.130.10.10
GO:GO:0008360 GO:GO:0004872 GO:GO:0007409 GO:GO:0016525
InterPro:IPR003659 SMART:SM00423 GO:GO:0010594 GO:GO:0045063
SUPFAM:SSF103575 SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231
PANTHER:PTHR11036 IPI:IPI00694238 UniGene:Bt.3339 OMA:FAFSPAC
GeneTree:ENSGT00560000076864 EMBL:DAAA02007141 EMBL:DAAA02007142
EMBL:DAAA02007143 Ensembl:ENSBTAT00000016223 Uniprot:F1MY79
Length = 762
Score = 325 (119.5 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 82/224 (36%), Positives = 118/224 (52%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + + V+FFF ETA E+ K SRVA+VCK D GG+ +L + W T+
Sbjct: 228 LQPDASFVAAIPSTQVVYFFFEETASEFEFFEKLRISRVAQVCKNDVGGEKLLQKKWTTF 287
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTS--TTGLMGSAICSFSIE 146
LKA+L C+ P + PF N I+ + + D + Y VFT+ G SA+C+FS++
Sbjct: 288 LKAQLLCTQPEQLPF--NVIRHAVLLADNSSTDPQVYAVFTSQWHVGGTRSSAVCAFSLK 345
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI+ F GK+KE TS W + PRPG C + D L F++ H LMDE
Sbjct: 346 DIKSVFEGKYKELDKETSRWTTYEYPDI-SPRPGSCSKGPSS--DKALTFMKDHFLMDEP 402
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
V P+ + + +T L V+ Q + G S ++Y +T
Sbjct: 403 VV---GTPLLVKSGVEYTWLAVETAQ-GIDGQ-SHLVMYLGTST 441
Score = 42 (19.8 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 331 TVDGGLVIMAVEELDAGKYDCW 352
TV G +++ + + G Y CW
Sbjct: 605 TVYNGSLLLLLRDGAGGLYQCW 626
>UNIPROTKB|Q5EA85 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9913 "Bos taurus"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0005886 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 GO:GO:0001525 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 EMBL:BT020684 IPI:IPI00694238
RefSeq:NP_001068908.1 UniGene:Bt.3339 ProteinModelPortal:Q5EA85
STRING:Q5EA85 GeneID:510239 KEGG:bta:510239 CTD:64218
eggNOG:NOG287504 HOGENOM:HOG000116087 HOVERGEN:HBG061165
InParanoid:Q5EA85 KO:K06521 OrthoDB:EOG40CHGB NextBio:20869339
Uniprot:Q5EA85
Length = 762
Score = 324 (119.1 bits), Expect = 4.8e-30, Sum P(2) = 4.8e-30
Identities = 82/224 (36%), Positives = 118/224 (52%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + + V+FFF ETA E+ K SRVA+VCK D GG+ +L + W T+
Sbjct: 228 LQPDASFVAAIPSTQVVYFFFEETASEFEFFEKLRISRVAQVCKNDVGGEKLLQKKWTTF 287
Query: 92 LKARLNCSIPGEFPFYFNEIQD-IYKVPGDDT--KFYGVFTTS--TTGLMGSAICSFSIE 146
LKA+L C+ P + PF N I+ + + T + Y VFT+ G SA+C+FS++
Sbjct: 288 LKAQLLCTQPEQLPF--NVIRHAVLQADNSSTDPQVYAVFTSQWHVGGTRSSAVCAFSLK 345
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI+ F GK+KE TS W + PRPG C + D L F++ H LMDE
Sbjct: 346 DIKSVFEGKYKELDKETSRWTTYEYPDI-SPRPGSCSKGPSS--DKALTFMKDHFLMDEP 402
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
V P+ + + +T L V+ Q + G S ++Y +T
Sbjct: 403 VV---GTPLLVKSGVEYTWLAVETAQ-GIDGQ-SHLVMYLGTST 441
Score = 42 (19.8 bits), Expect = 4.8e-30, Sum P(2) = 4.8e-30
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 331 TVDGGLVIMAVEELDAGKYDCW 352
TV G +++ + + G Y CW
Sbjct: 605 TVYNGSLLLLLRDGAGGLYQCW 626
>UNIPROTKB|H9L024 [details] [associations]
symbol:H9L024 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 EMBL:AADN02014605 EMBL:AADN02014606
EMBL:AADN02057536 EMBL:AADN02057537 Ensembl:ENSGALT00000021814
Uniprot:H9L024
Length = 698
Score = 340 (124.7 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 86/232 (37%), Positives = 123/232 (53%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + V+SR+ R+C D GG L W+T+LKARL CS+PG
Sbjct: 207 LYFFFREKSAD-APLSPGVYSRIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGPDGIE 265
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATS 162
+F+E+QD++ DTK Y VF+ S + GSA+C +S+ DI F G F +
Sbjct: 266 THFDELQDVFIQQTQDTKNPVIYAVFSASGSVFKGSAVCVYSMADIRMVFNGPFAHKEGP 325
Query: 163 TSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIRSHPLMDEAV--AHRDN 212
W+P + ++P PRPG C + T+ PD V+NF+RSHPLM AV AHR
Sbjct: 326 NYQWMPY-TGKMPYPRPGTCPGGTFTPSMKSTKDYPDEVINFMRSHPLMYHAVYPAHR-- 382
Query: 213 KPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATT--TLRTVFVKVR 260
+P+ R ++ FT + VD +V Y V F T T++ V V R
Sbjct: 383 QPLVVRTNVNYRFTTIAVD----QVDAADGRYEVLFLGTDRGTVQKVIVLPR 430
>UNIPROTKB|F1RLQ3 [details] [associations]
symbol:SEMA4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071526 "semaphorin-plexin signaling pathway"
evidence=IEA] [GO:0045063 "T-helper 1 cell differentiation"
evidence=IEA] [GO:0016525 "negative regulation of angiogenesis"
evidence=IEA] [GO:0010594 "regulation of endothelial cell
migration" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001627 InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0007409
GO:GO:0016525 GO:GO:0010594 GO:GO:0045063 SUPFAM:SSF101912
GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076864 EMBL:CU302298
Ensembl:ENSSSCT00000007114 OMA:PHVYAVF Uniprot:F1RLQ3
Length = 315
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 84/224 (37%), Positives = 118/224 (52%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQ D FV + + V+FFF ETA E+ K SRVARVCK D GG+ +L + W T+
Sbjct: 36 LQSDASFVAAIPSTQVVYFFFEETASEFEFFEKLHTSRVARVCKNDVGGEKLLQKKWTTF 95
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTS--TTGLMGSAICSFSIE 146
LKA+L C+ PG+ PF N I+ + + D Y VFT+ G SA+C+FS++
Sbjct: 96 LKAQLLCAQPGQLPF--NVIRHAVLLADNYSTDPHVYAVFTSQWRVGGTRSSAVCAFSLK 153
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
DI+R F GK+KE TS W + PRPG C + D L F++ H LMDE
Sbjct: 154 DIKRVFEGKYKELNKETSRWTTYGFPDI-SPRPGSCSEGPSS--DKALTFMKDHFLMDEP 210
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
V P+ + + +T L V+ Q + G S ++Y +T
Sbjct: 211 VI---GTPLLVKSGVEYTQLAVETAQ-GIDGR-SHLVMYLGTST 249
>ZFIN|ZDB-GENE-990715-7 [details] [associations]
symbol:sema4e "semaphorin 4e" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 ZFIN:ZDB-GENE-990715-7 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 HOGENOM:HOG000116087 EMBL:AF073289
IPI:IPI00486592 RefSeq:NP_571124.1 UniGene:Dr.78248
ProteinModelPortal:Q9YHX4 GeneID:796377 KEGG:dre:796377 CTD:796377
eggNOG:NOG275304 HOVERGEN:HBG100299 InParanoid:Q9YHX4
OrthoDB:EOG4P2Q1W NextBio:20932580 ArrayExpress:Q9YHX4
Uniprot:Q9YHX4
Length = 766
Score = 340 (124.7 bits), Expect = 6.3e-30, P = 6.3e-30
Identities = 86/219 (39%), Positives = 122/219 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPG-EFPF 106
++ FF ETAVEY + K SRVARVCK D GG+ L + W ++LKARL+C +P P
Sbjct: 235 IYLFFSETAVEYESYTKVDVSRVARVCKGDLGGQRTLQKKWTSFLKARLDCQVPNTNLPL 294
Query: 107 YFNEIQDIYKV-PGDDTK--FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQ--- 159
+QD++ + P D T FY VFT + SA+CS+ IEDI+ F GKFK
Sbjct: 295 L---VQDVFHLCPDDWTTCVFYAVFTPQSDSSQYSAVCSYKIEDIKTVFSKGKFKAPFNV 351
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVND-------TETL--PDSVLNFIRSHPLMDEAVAHR 210
TS W+ + S +P+PRPG C+++ T++L PD L F++ PLMD+AV
Sbjct: 352 ETSFVKWV-MYSGELPDPRPGACIDNHAREKGITKSLELPDKTLQFVKDKPLMDQAVTAE 410
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P+ +R FT +VV + GT+ + V F T
Sbjct: 411 --QPLLVKRGAAFTRIVVTTAT-ALNGTSHQ--VMFIGT 444
>ZFIN|ZDB-GENE-030131-7864 [details] [associations]
symbol:sema3e "sema domain, immunoglobulin domain
(Ig), short basic domain, secreted, (semaphorin) 3E" species:7955
"Danio rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0002040 "sprouting
angiogenesis" evidence=IMP] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-030131-7864
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0002040 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
CTD:9723 InterPro:IPR015513 PANTHER:PTHR11036:SF22 OMA:MIPDNED
EMBL:BX000697 IPI:IPI00615621 RefSeq:NP_001038549.1
UniGene:Dr.74189 Ensembl:ENSDART00000053125 GeneID:565658
KEGG:dre:565658 InParanoid:Q1LYS1 NextBio:20885988 Uniprot:Q1LYS1
Length = 768
Score = 314 (115.6 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 80/237 (33%), Positives = 121/237 (51%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGS I V++FF E + K+V++RVARVC D GG+ +L
Sbjct: 221 EPKFVGSAVIPDNDDPADDKVYYFFTERVADVEGGNKAVYTRVARVCANDQGGQRMLVNR 280
Query: 88 WATYLKARLNCSI--PGEFPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+++LK RL CS+ P +F+E++D++ + D K +G+F+T++ G A+C
Sbjct: 281 WSSFLKTRLICSVAGPNGIDTHFDELEDVFVLRKKDEKNPEIFGLFSTTSAVFKGYAVCM 340
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VN-----DTETLPDSVL 194
++++DI AF G F + + W V +VP PRPG C +N ++ D VL
Sbjct: 341 YNMDDIRAAFNGPFAHRERTDHHW-KVYDGKVPYPRPGSCASKINGGHFSSSKEYSDEVL 399
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRD--LLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
F RSHPLM +AV +P+ + T L VD V+ E Y V F T
Sbjct: 400 RFARSHPLMFQAVQPVHRRPILLDTEGGRKLTQLAVDRVEAE----DGHYNVLFIGT 452
Score = 51 (23.0 bits), Expect = 6.9e-30, Sum P(2) = 6.9e-30
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 299 PASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
P S+ ++WY + D ++K D+ I+T G L+++ + + DAG Y C
Sbjct: 599 PRSL-QASVTWYIEHGLDME--EVK-SDDRMIQTPHG-LLLLRIMKSDAGVYVC 647
>UNIPROTKB|K7GSK3 [details] [associations]
symbol:SEMA4D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
Gene3D:2.130.10.10 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 EMBL:CU469368
Ensembl:ENSSSCT00000033039 Uniprot:K7GSK3
Length = 742
Score = 339 (124.4 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 81/218 (37%), Positives = 120/218 (55%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFY 107
V+FFF E +VEY K + RVARVCK D GG L + W ++LKARL CS P +
Sbjct: 231 VYFFFTEVSVEYEFVFKLLIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRP-DSNLV 289
Query: 108 FNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFV-GKFKEQAT-- 161
FN ++D++ + D K FYGVFT + SA+C++++ E F GK+ + AT
Sbjct: 290 FNVLRDVFVLRSPDLKEPVFYGVFTPQLNNVGLSAVCAYNLSTAEAVFSRGKYMQSATVE 349
Query: 162 -STSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNFIRSHPLMDEAVAHRD 211
S + W+ + VP PRPG C+ + + LPD L F++ HPLMD++V D
Sbjct: 350 QSHTKWVRY-NGAVPTPRPGACITREARAANFSSSLNLPDKTLQFVKDHPLMDDSVTPID 408
Query: 212 NKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
+P + D+ +T +VVD + + GT + V F +T
Sbjct: 409 GRPRLIKSDVNYTQIVVDRT-WALDGTVHD--VMFVST 443
>UNIPROTKB|F1LNH0 [details] [associations]
symbol:Sema3g "Protein Sema3g" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 InterPro:IPR013151 Pfam:PF00047
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 IPI:IPI00358009
Ensembl:ENSRNOT00000025656 RGD:1306079 ArrayExpress:F1LNH0
Uniprot:F1LNH0
Length = 778
Score = 289 (106.8 bits), Expect = 8.8e-30, Sum P(2) = 8.8e-30
Identities = 78/222 (35%), Positives = 110/222 (49%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+FFF ET G SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 242 VYFFFSETVPSPDGGPGHVTVSRVGRVCVNDAGGQRVLVNKWSTFLKARLVCSVPGPGGA 301
Query: 105 PFYFNEIQDIYKV-P--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F++++D++ + P G + + Y +F+T + G A+C + + DI F G F +
Sbjct: 302 ETHFDQLEDVFLLWPKAGKNLEVYALFSTVSAVFRGFAVCVYHMVDIWEVFNGPFAHRDG 361
Query: 162 STSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAHR 210
W P +VP PRPG C + T+ PD VL F+R HPLM + V R
Sbjct: 362 PQHQWGPY-GGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFVRGHPLMFQPVRPR 420
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAAT 249
+PV L+ THL + Q V +E Y V F T
Sbjct: 421 RGRPV-----LVKTHLAQQLCQIVVDRVEAEDGTYDVIFLGT 457
Score = 76 (31.8 bits), Expect = 8.8e-30, Sum P(2) = 8.8e-30
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 291 HLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKY 349
H S F++ + W+ DKG Q+K +D+ + D GL+ + LDAG Y
Sbjct: 594 HNSTFLECRPKSPQAAVRWFLQRPGDKGADQVK--TDERVVQTDQGLLFRRLSRLDAGNY 651
Query: 350 DC 351
C
Sbjct: 652 TC 653
>UNIPROTKB|F6UVQ8 [details] [associations]
symbol:SEMA4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 CTD:64218 KO:K06521
OMA:FAFSPAC GeneTree:ENSGT00560000076864 Ensembl:ENSCAFT00000026693
EMBL:AAEX03005325 RefSeq:XP_547538.2 GeneID:490416 KEGG:cfa:490416
Uniprot:F6UVQ8
Length = 759
Score = 338 (124.0 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 88/226 (38%), Positives = 120/226 (53%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + +V+FFF ETA E+ K SRVARVCK D GG +L + W T+
Sbjct: 226 LQPDASFVAAIPSTHFVYFFFEETASEFEFFEKLHTSRVARVCKNDVGGDKLLQKKWTTF 285
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTT--GLMGSAICSFSIE 146
LKA+L CS PG+ PF N I+ +P + + Y F++ G SA+C+FS++
Sbjct: 286 LKAQLLCSQPGQLPF--NVIRHAVLLPAAAPAEPRVYATFSSQWQIGGTRSSAVCAFSLK 343
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DI+R F GK+KE TS W + VPE PRPG C + D L F++ H LMD
Sbjct: 344 DIKRVFEGKYKELNKETSRWT---TYGVPEISPRPGSCSVGPSS--DKALTFMKDHFLMD 398
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
E V P+ + + +T L V+ Q V G S ++Y T
Sbjct: 399 EQVM---GTPLLVQSGVEYTKLAVETAQ-GVDGH-SHLVMYLGTAT 439
>UNIPROTKB|E2QT31 [details] [associations]
symbol:SEMA4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 Ensembl:ENSCAFT00000026693
Uniprot:E2QT31
Length = 764
Score = 338 (124.0 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 88/226 (38%), Positives = 120/226 (53%)
Query: 34 LQPD--FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATY 91
LQPD FV + +V+FFF ETA E+ K SRVARVCK D GG +L + W T+
Sbjct: 231 LQPDASFVAAIPSTHFVYFFFEETASEFEFFEKLHTSRVARVCKNDVGGDKLLQKKWTTF 290
Query: 92 LKARLNCSIPGEFPFYFNEIQDIYKVPGD---DTKFYGVFTTSTT--GLMGSAICSFSIE 146
LKA+L CS PG+ PF N I+ +P + + Y F++ G SA+C+FS++
Sbjct: 291 LKAQLLCSQPGQLPF--NVIRHAVLLPAAAPAEPRVYATFSSQWQIGGTRSSAVCAFSLK 348
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPE--PRPGQCVNDTETLPDSVLNFIRSHPLMD 204
DI+R F GK+KE TS W + VPE PRPG C + D L F++ H LMD
Sbjct: 349 DIKRVFEGKYKELNKETSRWT---TYGVPEISPRPGSCSVGPSS--DKALTFMKDHFLMD 403
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAATT 250
E V P+ + + +T L V+ Q V G S ++Y T
Sbjct: 404 EQVM---GTPLLVQSGVEYTKLAVETAQ-GVDGH-SHLVMYLGTAT 444
>UNIPROTKB|O42237 [details] [associations]
symbol:SEMA3E "Semaphorin-3E" species:9031 "Gallus gallus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] InterPro:IPR001627 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
GO:GO:0005576 GO:GO:0007399 GO:GO:0030154 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0004872 GO:GO:0001525 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 EMBL:AF022947 EMBL:U28243
IPI:IPI00598668 RefSeq:NP_989573.1 UniGene:Gga.136
ProteinModelPortal:O42237 SMR:O42237 GeneID:374089 KEGG:gga:374089
CTD:9723 eggNOG:NOG324739 InParanoid:O42237 OrthoDB:EOG4THVSM
NextBio:20813608 InterPro:IPR015513 PANTHER:PTHR11036:SF22
Uniprot:O42237
Length = 785
Score = 307 (113.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 77/237 (32%), Positives = 120/237 (50%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P FVGSY I V+ FF E A+E ++++RV RVC D GG+ I+
Sbjct: 228 EPKFVGSYMIPDNEDHDDNKVYLFFTEKALEAETSTHAIYTRVGRVCVNDMGGQRIVVNK 287
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICS 142
W+T+LK RL CS+PG +F+E++D++ + D K +G+F+T++ G AIC
Sbjct: 288 WSTFLKTRLVCSVPGRNGIDTHFDELEDVFLLQTRDNKNPVIFGLFSTTSNIFRGYAICV 347
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC---VND-----TETLPDSVL 194
+ + + AF G + + W + +VP PRPG C VN T+ PD +
Sbjct: 348 YHMAIVRAAFNGPYAHKEGPEYYWA-LYEGKVPYPRPGSCASKVNGGLYTTTKDYPDEAV 406
Query: 195 NFIRSHPLMDEAVAHRDNKPVFYRRDLLFT--HLVVDVVQYEVFGTTSEYIVYFAAT 249
+F RSHPLM + + +P+ + D + + VD V+ E +Y V F T
Sbjct: 407 HFARSHPLMYQPIKPVHKRPILVKTDGKYNLKQIAVDRVEAE----DGQYDVLFIGT 459
Score = 56 (24.8 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 307 MSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
++W+ + + + + ++D+ I +D GL+ + + LDAG Y C
Sbjct: 615 VNWFVQRAHETKKE-EVKTDERIIKMDLGLLFLKLHRLDAGTYFC 658
>UNIPROTKB|F1P9X6 [details] [associations]
symbol:SEMA4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
EMBL:AAEX03002329 Ensembl:ENSCAFT00000019183 Uniprot:F1P9X6
Length = 833
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/180 (42%), Positives = 107/180 (59%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE-FPF 106
++FFF ET E+ ++ SR+AR+CK D GG+ +L Q W ++LKA+L CS P + FPF
Sbjct: 256 IYFFFSETGQEFEFFENTIVSRIARICKGDEGGERVLQQRWTSFLKAQLLCSRPDDGFPF 315
Query: 107 YFNEIQDIYKV---PGD--DTKFYGVFTTS--TTGLMGSAICSFSIEDIERAFVGKFKEQ 159
N +QD++ + P D DT FYGVFT+ GSAIC F+++D+++AF G +KE
Sbjct: 316 --NVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRGSTEGSAICVFTMKDVQKAFNGLYKEV 373
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDTET---------LPDSVLNFIRSHPLMDEAVAHR 210
T W V + VP PRPG C+ ++ LPD VLNF++ H LMD V R
Sbjct: 374 NRETQQWYTV-THPVPMPRPGACITNSARERKITSSLQLPDRVLNFLKDHFLMDGQVRSR 432
>UNIPROTKB|F1P9X5 [details] [associations]
symbol:SEMA4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
OMA:NLATRLW EMBL:AAEX03002329 Ensembl:ENSCAFT00000019194
Uniprot:F1P9X5
Length = 839
Score = 337 (123.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/180 (42%), Positives = 107/180 (59%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE-FPF 106
++FFF ET E+ ++ SR+AR+CK D GG+ +L Q W ++LKA+L CS P + FPF
Sbjct: 261 IYFFFSETGQEFEFFENTIVSRIARICKGDEGGERVLQQRWTSFLKAQLLCSRPDDGFPF 320
Query: 107 YFNEIQDIYKV---PGD--DTKFYGVFTTS--TTGLMGSAICSFSIEDIERAFVGKFKEQ 159
N +QD++ + P D DT FYGVFT+ GSAIC F+++D+++AF G +KE
Sbjct: 321 --NVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRGSTEGSAICVFTMKDVQKAFNGLYKEV 378
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDTET---------LPDSVLNFIRSHPLMDEAVAHR 210
T W V + VP PRPG C+ ++ LPD VLNF++ H LMD V R
Sbjct: 379 NRETQQWYTV-THPVPMPRPGACITNSARERKITSSLQLPDRVLNFLKDHFLMDGQVRSR 437
>ZFIN|ZDB-GENE-050513-5 [details] [associations]
symbol:sema3c "semaphorin 3c" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-050513-5 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
EMBL:BX537168 SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000102148 EMBL:BX897665 IPI:IPI00513435
Ensembl:ENSDART00000002104 Bgee:F1Q9B9 Uniprot:F1Q9B9
Length = 757
Score = 305 (112.4 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 86/271 (31%), Positives = 131/271 (48%)
Query: 31 DNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWAT 90
D L PD GS ++FF RE + K++ + VARVC DTGG+ L W T
Sbjct: 235 DAQLIPD--GSDPNDAKLYFFLRERLTDTSGNTKNIHAMVARVCPNDTGGQRSLVNKWTT 292
Query: 91 YLKARLNCSIPGE--FPFYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSI 145
+LKAR+ CS+ E +F+E+++++ + D K +GVFT++++ GSA+C +++
Sbjct: 293 FLKARMVCSVLEEDGTETHFDELENVFLLETDHPKGLLIFGVFTSTSSVFRGSAVCVYNM 352
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFI 197
DI F G F + W+ R+P PRPG C + T+ PD V+ F+
Sbjct: 353 ADILTVFNGPFAHREGPNFQWV-AFQGRIPYPRPGTCPGGAFTPHIQSTKEFPDDVVTFV 411
Query: 198 RSHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTV 255
R+HP+M + KP+ R D +T + VD +V Y V F T TV
Sbjct: 412 RNHPVMFNPIYPVGRKPLVVRTHADYKYTSIAVD----QVPAADGHYQVLFLGTDK-GTV 466
Query: 256 FVKVRLLQDVSNTSDSICES-SVGRLKQTVT 285
V L + S D I E V + + +T
Sbjct: 467 QKVVVLPSNGSLDEDLILEELEVFKTQSPIT 497
Score = 56 (24.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 292 LSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
L C K P + + W + R ++K SD+ + T + GL+I +V D G Y C
Sbjct: 600 LECQPKSPQAS----VKWLIQRDNDRRKEVKL-SDRVVST-NHGLLIRSVHSSDQGLYYC 653
>UNIPROTKB|F1LSV0 [details] [associations]
symbol:Sema4b "Protein Sema4b" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
IPI:IPI00763213 Ensembl:ENSRNOT00000030914 RGD:1307872
ArrayExpress:F1LSV0 Uniprot:F1LSV0
Length = 548
Score = 329 (120.9 bits), Expect = 3.1e-29, P = 3.1e-29
Identities = 82/194 (42%), Positives = 112/194 (57%)
Query: 36 PDFVGSYDIGK--YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ +GS IG ++FFF ET E+ ++ SRVARVCK D GG+ +L Q W ++LK
Sbjct: 232 PESLGS-PIGDDDKIYFFFSETGQEFEFFENTIVSRVARVCKGDEGGERVLQQRWTSFLK 290
Query: 94 ARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKFYGVFTTST-TGLM-GSAICSFSI 145
A+L CS P + FPF N +QD++ + P D T FYGVFT+ G GSAIC F++
Sbjct: 291 AQLLCSRPDDGFPF--NVLQDVFTLNPNPQDWRKTLFYGVFTSQWHRGTTEGSAICVFTM 348
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNF 196
D+++AF G +K+ T W + VP PRPG C+ N + LPD VLNF
Sbjct: 349 NDVQKAFDGLYKKVNRETQQWYTE-THPVPTPRPGACITNSARERKINSSLQLPDRVLNF 407
Query: 197 IRSHPLMDEAVAHR 210
++ H LMD V R
Sbjct: 408 LKDHFLMDGQVRSR 421
>MGI|MGI:107559 [details] [associations]
symbol:Sema4b "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4B" species:10090 "Mus musculus" [GO:0004872 "receptor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
MGI:MGI:107559 GO:GO:0016021 GO:GO:0007399 GO:GO:0030154
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
GeneTree:ENSGT00560000076864 eggNOG:NOG241642 OrthoDB:EOG4CNQQF
EMBL:DQ073331 EMBL:AK173249 EMBL:X85992 IPI:IPI00464135 PIR:I48746
RefSeq:NP_038687.2 UniGene:Mm.275909 ProteinModelPortal:Q62179
SMR:Q62179 IntAct:Q62179 MINT:MINT-1350466 STRING:Q62179
PhosphoSite:Q62179 PaxDb:Q62179 PRIDE:Q62179 DNASU:20352
Ensembl:ENSMUST00000032754 GeneID:20352 KEGG:mmu:20352
UCSC:uc009hzo.1 CTD:10509 InParanoid:Q62179 OMA:NLATRLW
NextBio:298211 Bgee:Q62179 Genevestigator:Q62179
GermOnline:ENSMUSG00000030539 Uniprot:Q62179
Length = 823
Score = 332 (121.9 bits), Expect = 5.4e-29, P = 5.4e-29
Identities = 82/194 (42%), Positives = 113/194 (58%)
Query: 36 PDFVGSYDIGK--YVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ +GS IG ++FFF ET E+ ++ SRVARVCK D GG+ +L Q W ++LK
Sbjct: 234 PESLGS-PIGDDDKIYFFFSETGQEFEFFENTIVSRVARVCKGDEGGERVLQQRWTSFLK 292
Query: 94 ARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKFYGVFTTST-TGLM-GSAICSFSI 145
A+L CS P + FPF N +QD++ + P D T FYGVFT+ G GSAIC F++
Sbjct: 293 AQLLCSRPDDGFPF--NVLQDVFTLNPNPQDWRKTLFYGVFTSQWHRGTTEGSAICVFTM 350
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNF 196
D+++AF G +K+ T W + +VP PRPG C+ N + LPD VLNF
Sbjct: 351 NDVQKAFDGLYKKVNRETQQWYTE-THQVPTPRPGACITNSARERKINSSLQLPDRVLNF 409
Query: 197 IRSHPLMDEAVAHR 210
++ H LMD V R
Sbjct: 410 LKDHFLMDGQVRSR 423
>UNIPROTKB|Q9NS98 [details] [associations]
symbol:SEMA3G "Semaphorin-3G" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 HSSP:O08665 EMBL:AB029496
EMBL:AK024425 EMBL:BC098104 EMBL:BC098137 EMBL:BC099724
IPI:IPI00024570 RefSeq:NP_064548.1 UniGene:Hs.59729
ProteinModelPortal:Q9NS98 SMR:Q9NS98 STRING:Q9NS98
PhosphoSite:Q9NS98 DMDM:74761676 PRIDE:Q9NS98
Ensembl:ENST00000231721 GeneID:56920 KEGG:hsa:56920 UCSC:uc003dea.1
CTD:56920 GeneCards:GC03M052467 HGNC:HGNC:30400 HPA:HPA001761
neXtProt:NX_Q9NS98 PharmGKB:PA142670937 eggNOG:NOG265742
InParanoid:Q9NS98 OMA:TEHNSTF OrthoDB:EOG42820Z PhylomeDB:Q9NS98
GenomeRNAi:56920 NextBio:62424 ArrayExpress:Q9NS98 Bgee:Q9NS98
CleanEx:HS_SEMA3G Genevestigator:Q9NS98 GermOnline:ENSG00000010319
Uniprot:Q9NS98
Length = 782
Score = 281 (104.0 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
Identities = 78/222 (35%), Positives = 108/222 (48%)
Query: 48 VFFFFRETAVEYINCGKSV-FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+FFF ET V SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 243 VYFFFSETVPSPDGGSNHVTVSRVGRVCVNDAGGQRVLVNKWSTFLKARLVCSVPGPGGA 302
Query: 105 PFYFNEIQDIYKV-P--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F++++D++ + P G + Y +F+T + G A+C + + DI F G F +
Sbjct: 303 ETHFDQLEDVFLLWPKAGKSLEVYALFSTVSAVFQGFAVCVYHMADIWEVFNGPFAHRDG 362
Query: 162 STSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAHR 210
W P +VP PRPG C + T+ PD VL F R+HPLM V R
Sbjct: 363 PQHQWGPY-GGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFARAHPLMFWPVRPR 421
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAAT 249
+PV L+ THL + Q V +E Y V F T
Sbjct: 422 HGRPV-----LVKTHLAQQLHQIVVDRVEAEDGTYDVIFLGT 458
Score = 76 (31.8 bits), Expect = 6.5e-29, Sum P(2) = 6.5e-29
Identities = 24/80 (30%), Positives = 39/80 (48%)
Query: 274 ESSVGRLKQTVTWGQSVHLSCFVK-LPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRT 331
E +VG + T+ +G H S F++ LP S + W D+G Q+K +D+ +
Sbjct: 580 EEAVGLVAATMVYGTE-HNSTFLECLPKS-PQAAVRWLLQRPGDEGPDQVK--TDERVLH 635
Query: 332 VDGGLVIMAVEELDAGKYDC 351
+ GL+ + DAG Y C
Sbjct: 636 TERGLLFRRLSRFDAGTYTC 655
>MGI|MGI:3041242 [details] [associations]
symbol:Sema3g "sema domain, immunoglobulin domain (Ig),
short basic domain, secreted, (semaphorin) 3G" species:10090 "Mus
musculus" [GO:0004872 "receptor activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001627 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 MGI:MGI:3041242 GO:GO:0007275
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
HOGENOM:HOG000039964 HOVERGEN:HBG055071 KO:K06840
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076660
HSSP:O08665 CTD:56920 OMA:TEHNSTF OrthoDB:EOG42820Z EMBL:AB127607
EMBL:AK137463 IPI:IPI00625202 RefSeq:NP_001020550.1
UniGene:Mm.27812 ProteinModelPortal:Q4LFA9 SMR:Q4LFA9 STRING:Q4LFA9
PhosphoSite:Q4LFA9 PRIDE:Q4LFA9 Ensembl:ENSMUST00000090180
GeneID:218877 KEGG:mmu:218877 UCSC:uc007sxe.1 eggNOG:KOG3611
InParanoid:Q4LFA9 NextBio:376471 Bgee:Q4LFA9 Genevestigator:Q4LFA9
GermOnline:ENSMUSG00000021904 Uniprot:Q4LFA9
Length = 780
Score = 286 (105.7 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 78/222 (35%), Positives = 109/222 (49%)
Query: 48 VFFFFRETAVEYINC-GKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--F 104
V+FFF ET G SRV RVC D GG+ +L W+T+LKARL CS+PG
Sbjct: 243 VYFFFSETVPSPDGGPGHVTISRVGRVCVNDAGGQRVLVNKWSTFLKARLVCSVPGPGGA 302
Query: 105 PFYFNEIQDIYKV-P--GDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
+F++++D++ + P G + Y +F+T + G A+C + + DI F G F +
Sbjct: 303 ETHFDQLEDVFLLWPKAGKSLEVYALFSTVSAVFQGFAVCVYHMVDIWEVFNGPFAHRDG 362
Query: 162 STSAWLPVLSSRVPEPRPGQCVN-----------DTETLPDSVLNFIRSHPLMDEAVAHR 210
W P +VP PRPG C + T+ PD VL F+R HPLM + V R
Sbjct: 363 PQHQWGPY-GGKVPFPRPGVCPSKMTAQPGRPFGSTKDYPDEVLQFVRDHPLMFQPVRPR 421
Query: 211 DNKPVFYRRDLLFTHLVVDVVQYEVFGTTSE---YIVYFAAT 249
+PV L+ THL + Q V +E Y V F T
Sbjct: 422 RGRPV-----LVKTHLAQRLRQIVVDRVEAEDGTYDVIFLGT 458
Score = 66 (28.3 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 291 HLSCFVK-LPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAGK 348
H S F++ LP S + W+ DKG Q+K ++ ++T G L+ + DAG
Sbjct: 596 HNSTFLECLPKS-PQAAVRWFLQRPGDKGTDQVK-TDERVVQTAQG-LLFRRLSRHDAGN 652
Query: 349 YDC 351
Y C
Sbjct: 653 YTC 655
>UNIPROTKB|F1MYZ4 [details] [associations]
symbol:SEMA4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
OMA:NLATRLW EMBL:DAAA02052162 IPI:IPI00685267
Ensembl:ENSBTAT00000028346 Uniprot:F1MYZ4
Length = 828
Score = 326 (119.8 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 87/233 (37%), Positives = 122/233 (52%)
Query: 36 PDFVGSY--DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P+ +GS D K ++FFFRE E ++ SR+AR+CK D GG +L Q W ++LK
Sbjct: 243 PESLGSSEGDDDK-IYFFFREIGQELEFFENTMVSRIARICKGDEGGGRVLQQRWTSFLK 301
Query: 94 ARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKFYGVFTTSTTG--LMGSAICSFSI 145
A+L C P + FPF N +QD++ + P D DT FYGVFT+ G GSA+C F++
Sbjct: 302 AQLLCLRPDDGFPF--NVLQDMFTLTPRPEDWPDTLFYGVFTSQWNGGTTEGSAVCVFTM 359
Query: 146 EDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV---------NDTETLPDSVLNF 196
+D++ F G +KE T W V + VP PRPG C+ N + LPD VLNF
Sbjct: 360 KDVQSTFNGFYKEVNRETQQWYTV-THPVPSPRPGACITNSARERKINSSLQLPDRVLNF 418
Query: 197 IRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
++ H LMD V R + + + H+ V + V Y V F T
Sbjct: 419 LKDHFLMDGQVRGR---MLLLQPQARYQHVTV----HRVLALNRTYDVLFLGT 464
>MGI|MGI:1340055 [details] [associations]
symbol:Sema4f "sema domain, immunoglobulin domain (Ig), TM
domain, and short cytoplasmic domain" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030517 "negative regulation of
axon extension" evidence=ISA] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=ISA] [GO:0045202 "synapse" evidence=ISO]
[GO:0045211 "postsynaptic membrane" evidence=ISO]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015512
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 MGI:MGI:1340055 GO:GO:0005783
GO:GO:0016021 GO:GO:0005886 Gene3D:2.130.10.10 GO:GO:0045211
GO:GO:0004872 EMBL:CH466523 InterPro:IPR003659 SMART:SM00423
GO:GO:0030517 GO:GO:0031290 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 HOGENOM:HOG000116087 KO:K06521
GeneTree:ENSGT00560000076864 CTD:10505 eggNOG:NOG258001
HOVERGEN:HBG093234 OMA:CNRGLPV OrthoDB:EOG4J117K
PANTHER:PTHR11036:SF13 EMBL:AB021291 EMBL:AB022316 EMBL:BC094567
IPI:IPI00346653 RefSeq:NP_035480.3 UniGene:Mm.270543
ProteinModelPortal:Q9Z123 SMR:Q9Z123 STRING:Q9Z123
PhosphoSite:Q9Z123 PRIDE:Q9Z123 Ensembl:ENSMUST00000000641
GeneID:20355 KEGG:mmu:20355 InParanoid:Q505G0 NextBio:298225
Bgee:Q9Z123 Genevestigator:Q9Z123 GermOnline:ENSMUSG00000000627
Uniprot:Q9Z123
Length = 777
Score = 325 (119.5 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 82/228 (35%), Positives = 114/228 (50%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D +FFFF ET+ + + RVARVC D GG+ L Q W T+LK
Sbjct: 239 LSPAEWGDEDGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 298
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G ++ ++ PG T FYG+F++ G SA+C+F +DI
Sbjct: 299 ADLLCPGPEHGRASGVLQDMTELRPQPGAGTPLFYGIFSSQWEGAAISAVCAFRPQDIRA 358
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTE--------TLPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ N+ + +LPD VL FIR HP
Sbjct: 359 VLNGPFRELKHDCNRGLPVMDNEVPQPRPGECITNNMKFQQFGSSLSLPDRVLTFIRDHP 418
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LMD V D +P+ D + +V V + G EY V + T
Sbjct: 419 LMDRPVFPADGRPLLVTTDTAYLRVVAHRVT-SLSG--KEYDVLYLGT 463
>RGD|3658 [details] [associations]
symbol:Sema4f "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain, (semaphorin)
4F" species:10116 "Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IDA] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015512 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 RGD:3658 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
Gene3D:2.130.10.10 GO:GO:0045211 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 GO:GO:0030517 GO:GO:0031290 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 KO:K06521 GeneTree:ENSGT00560000076864 CTD:10505
eggNOG:NOG258001 HOVERGEN:HBG093234 OMA:CNRGLPV OrthoDB:EOG4J117K
PANTHER:PTHR11036:SF13 EMBL:AB002563 IPI:IPI00208178
RefSeq:NP_062145.1 UniGene:Rn.42885 ProteinModelPortal:Q9Z143
STRING:Q9Z143 PRIDE:Q9Z143 Ensembl:ENSRNOT00000009269 GeneID:29745
KEGG:rno:29745 UCSC:RGD:3658 InParanoid:Q9Z143 NextBio:610260
Genevestigator:Q9Z143 GermOnline:ENSRNOG00000006784 Uniprot:Q9Z143
Length = 776
Score = 322 (118.4 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 82/228 (35%), Positives = 113/228 (49%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D +FFFF ET+ + + RVARVC D GG+ L Q W T+LK
Sbjct: 238 LSPAEWGDEDGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 297
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G + ++ PG T FYG+F++ G SA+C+F +DI
Sbjct: 298 ADLLCPGPEHGRASGVLQAMAELRPQPGAGTPIFYGIFSSQWEGAAISAVCAFRPQDIRA 357
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTE--------TLPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ N+ + +LPD VL FIR HP
Sbjct: 358 VLNGPFRELKHDCNRGLPVMDNEVPQPRPGECIANNMKLQQFGSSLSLPDRVLTFIRDHP 417
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LMD V D +P+ D + +V V + G EY V + T
Sbjct: 418 LMDRPVFPADGRPLLVTTDTAYLRVVAHRVT-SLSG--KEYDVLYLGT 462
>UNIPROTKB|F1SNW1 [details] [associations]
symbol:SEMA4F "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015512 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007411 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06521 GeneTree:ENSGT00560000076864 CTD:10505
OMA:CNRGLPV PANTHER:PTHR11036:SF13 EMBL:CU633183
RefSeq:XP_003125033.3 Ensembl:ENSSSCT00000009048 GeneID:100512275
KEGG:ssc:100512275 Uniprot:F1SNW1
Length = 771
Score = 313 (115.2 bits), Expect = 5.2e-27, P = 5.2e-27
Identities = 82/228 (35%), Positives = 111/228 (48%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D V+FFF E + + + + RVARVC D GG+ L Q W T+LK
Sbjct: 234 LSPAEWGDDDGDDEVYFFFTEISRAFDSYERVKVPRVARVCAGDLGGRKTLQQRWTTFLK 293
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G ++ + PG T FYG+F++ G SA+CSF +DI
Sbjct: 294 ADLLCPGPEHGRASSVLQDMAILRPEPGAGTPVFYGIFSSQWEGAAISAVCSFRPQDIRT 353
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTET--------LPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ N+ + LPD VL FIR HP
Sbjct: 354 VLNGPFRELKHDCNRGLPVMDNDVPQPRPGECIANNMKFQQFGSSLFLPDRVLTFIRDHP 413
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LMD V D P+ D + +V V + G EY V + T
Sbjct: 414 LMDRPVFPADGHPLLVTTDTAYVRVVAHRVP-SLSG--KEYDVLYLGT 458
>UNIPROTKB|E1BF41 [details] [associations]
symbol:SEMA4F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015512 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004
SMART:SM00630 GO:GO:0005783 GO:GO:0016021 GO:GO:0005886
GO:GO:0007411 Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 KO:K06521 GeneTree:ENSGT00560000076864 CTD:10505
OMA:CNRGLPV PANTHER:PTHR11036:SF13 EMBL:DAAA02030321
EMBL:DAAA02030322 UniGene:Bt.32639 IPI:IPI00905826
RefSeq:XP_003582811.1 RefSeq:XP_003586665.1
Ensembl:ENSBTAT00000009186 GeneID:530018 KEGG:bta:530018
ArrayExpress:E1BF41 Uniprot:E1BF41
Length = 771
Score = 312 (114.9 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 81/228 (35%), Positives = 111/228 (48%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D ++FFF E A + + + RVARVC D GG+ L Q W T+LK
Sbjct: 234 LSPAEWGDEDGDDEIYFFFTEIARAFDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 293
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G ++ + G T FYG+F++ G SA+CSF +DI
Sbjct: 294 ADLLCPGPEHGRASSVLQDVAILRPEGGAGTPVFYGIFSSQWEGAAISAVCSFRPQDIRT 353
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTET--------LPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ N+ + LPD VL FIR HP
Sbjct: 354 VLNGPFRELKHDCNRGLPVMDNDVPQPRPGECITNNMKLQQFGSSLFLPDRVLTFIRDHP 413
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LMD V D +P+ D + +V V + G EY V + T
Sbjct: 414 LMDRPVFPADGRPLLVTTDTAYLRVVAHRVP-SLSG--KEYDVLYLGT 458
>UNIPROTKB|O95754 [details] [associations]
symbol:SEMA4F "Semaphorin-4F" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007267
"cell-cell signaling" evidence=TAS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR015512
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0005783 GO:GO:0007411
GO:GO:0005887 Gene3D:2.130.10.10 GO:GO:0045211 GO:GO:0007267
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 GO:GO:0030517
GO:GO:0031290 EMBL:AC006544 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 HOGENOM:HOG000116087 KO:K06521
EMBL:AB022317 EMBL:AL136552 EMBL:AK075384 EMBL:BC018361
EMBL:BC038411 EMBL:AF053369 IPI:IPI00032914 IPI:IPI00216574
RefSeq:NP_001258590.1 RefSeq:NP_001258591.1 RefSeq:NP_004254.2
UniGene:Hs.25887 ProteinModelPortal:O95754 SMR:O95754 STRING:O95754
PhosphoSite:O95754 PRIDE:O95754 DNASU:10505 Ensembl:ENST00000339773
Ensembl:ENST00000357877 GeneID:10505 KEGG:hsa:10505 UCSC:uc002sna.1
UCSC:uc002snb.1 CTD:10505 GeneCards:GC02P074793 HGNC:HGNC:10734
MIM:603706 neXtProt:NX_O95754 PharmGKB:PA35656 eggNOG:NOG258001
HOVERGEN:HBG093234 InParanoid:O95754 OMA:CNRGLPV OrthoDB:EOG4J117K
PhylomeDB:O95754 GenomeRNAi:10505 NextBio:39852 ArrayExpress:O95754
Bgee:O95754 CleanEx:HS_SEMA4F Genevestigator:O95754
GermOnline:ENSG00000135622 PANTHER:PTHR11036:SF13 Uniprot:O95754
Length = 770
Score = 310 (114.2 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 83/229 (36%), Positives = 116/229 (50%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D ++FFF ET+ + + + RVARVC D GG+ L Q W T+LK
Sbjct: 233 LSPAEWGDEDGDDEIYFFFTETSRAFDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 292
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKV-P--GDDTK-FYGVFTTSTTGLMGSAICSFSIEDIE 149
A L C P E + +QD+ + P G T FYG+F++ G SA+C+F +DI
Sbjct: 293 ADLLCPGP-EHGRASSVLQDVAVLRPELGAGTPIFYGIFSSQWEGATISAVCAFRPQDIR 351
Query: 150 RAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTE--------TLPDSVLNFIRSH 200
G F+E + LPV+ + VP+PRPG+C+ N+ + +LPD VL FIR H
Sbjct: 352 TVLNGPFRELKHDCNRGLPVVDNDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDH 411
Query: 201 PLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
PLMD V D P+ D + +V V + G EY V + T
Sbjct: 412 PLMDRPVFPADGHPLLVTTDTAYLRVVAHRVT-SLSG--KEYDVLYLGT 457
>UNIPROTKB|E2R4N1 [details] [associations]
symbol:SEMA4F "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015512 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007411 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00560000076864
OMA:CNRGLPV PANTHER:PTHR11036:SF13 EMBL:AAEX03010963
EMBL:AAEX03010964 Ensembl:ENSCAFT00000013225 NextBio:20857549
Uniprot:E2R4N1
Length = 725
Score = 304 (112.1 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 78/228 (34%), Positives = 112/228 (49%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D ++FFF ET+ + + + RVARVC D GG+ L W T+LK
Sbjct: 233 LSPAEWGDEDGDDEIYFFFTETSRAFDSYERIKVPRVARVCAGDLGGRKTLQHRWTTFLK 292
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTTSTTGLMGSAICSFSIEDIER 150
A L C P G ++ + +T FYG+F++ G SA+C+F +DI
Sbjct: 293 ADLLCPGPEHGRASSILQDVAILRPEHRSETPIFYGIFSSQWEGAAISAVCAFRPQDIRT 352
Query: 151 AFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCV-NDTE--------TLPDSVLNFIRSHP 201
G F+E + LPV+ + VP+PRPG+C+ N+ + +LPD VL FIR HP
Sbjct: 353 VLNGPFRELKHDCNRGLPVMDNDVPQPRPGECITNNMKLQQFGSSLSLPDRVLTFIRDHP 412
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
LMD V D+ P+ D + +V V + G EY V + T
Sbjct: 413 LMDRPVFPTDDHPLLVTTDTAYLRVVAHRVT-SLSG--KEYDVLYLGT 457
>UNIPROTKB|H0YMZ3 [details] [associations]
symbol:SEMA4B "Semaphorin-4B" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 GO:GO:0007275 Gene3D:2.130.10.10 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 EMBL:AC091167 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HGNC:HGNC:10730 Ensembl:ENST00000559074 Uniprot:H0YMZ3
Length = 461
Score = 296 (109.3 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 69/157 (43%), Positives = 93/157 (59%)
Query: 71 ARVCKRDTGGKNILSQNWATYLKARLNCSIPGE-FPFYFNEIQDIYKV---PGD--DTKF 124
AR+CK D GG+ +L Q W ++LKA+L CS P + FPF N +QD++ + P D DT F
Sbjct: 2 ARICKGDEGGERVLQQRWTSFLKAQLLCSRPDDGFPF--NVLQDVFTLSPSPQDWRDTLF 59
Query: 125 YGVFTTST-TGLM-GSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC 182
YGVFT+ G GSA+C F+++D++R F G +KE T W V + VP PRPG C
Sbjct: 60 YGVFTSQWHRGTTEGSAVCVFTMKDVQRVFSGLYKEVNRETQQWYTV-THPVPTPRPGAC 118
Query: 183 V---------NDTETLPDSVLNFIRSHPLMDEAVAHR 210
+ N + LPD VLNF++ H LMD V R
Sbjct: 119 ITNSARERKINSSLQLPDRVLNFLKDHFLMDGQVRSR 155
>RGD|1310436 [details] [associations]
symbol:Sema4g "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4G" species:10116 "Rattus norvegicus" [GO:0004872
"receptor activity" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 RGD:1310436 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 EMBL:CH473986 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 KO:K06521
GeneTree:ENSGT00560000076864 CTD:57715 OrthoDB:EOG483D3Z
OMA:LTTQWKT IPI:IPI00372530 RefSeq:NP_001101996.1 UniGene:Rn.1645
Ensembl:ENSRNOT00000019956 GeneID:361764 KEGG:rno:361764
UCSC:RGD:1310436 NextBio:677533 Uniprot:D4A6G2
Length = 837
Score = 292 (107.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 71/196 (36%), Positives = 98/196 (50%)
Query: 47 YVFFFFRETAVEYINCGKSVF--SRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF 104
Y FF RE +S +RVARVCK D GGK IL + W ++LKARL C IP
Sbjct: 239 YYFFMEREEGSSSFTQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP--- 295
Query: 105 PFYFNEIQDIYKVPGDD---TKFYGVFTTSTTG--LMGSAICSFSIEDIERAFVGKFKEQ 159
+ ++ + + D T FY VFT +T L SAIC + + +I+ F G F E
Sbjct: 296 --QYETLRGVCSLDADTSSHTHFYAVFTLTTQWKTLEASAICRYDLAEIQAVFTGPFMEY 353
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDT---------ETLPDSVLNFIRSHPLMDEAVAHR 210
W VPEPRPG C+ D+ + LP VL+F++ HPLM V
Sbjct: 354 QDGARRW-GRYEGGVPEPRPGSCITDSLRSRGYNSSQDLPSLVLDFVKLHPLMARPVVPT 412
Query: 211 DNKPVFYRRDLLFTHL 226
+P+ +R++ +THL
Sbjct: 413 RGRPLLLKRNVRYTHL 428
>MGI|MGI:1347047 [details] [associations]
symbol:Sema4g "sema domain, immunoglobulin domain (Ig),
transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4G" species:10090 "Mus musculus" [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 MGI:MGI:1347047
GO:GO:0016021 GO:GO:0005886 GO:GO:0007399 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
GeneTree:ENSGT00560000076864 CTD:57715 eggNOG:NOG309161
OrthoDB:EOG483D3Z ChiTaRS:SEMA4G EMBL:AF134918 EMBL:BC049183
IPI:IPI00124666 RefSeq:NP_036106.1 UniGene:Mm.34404
ProteinModelPortal:Q9WUH7 SMR:Q9WUH7 MINT:MINT-1350435
STRING:Q9WUH7 PhosphoSite:Q9WUH7 PaxDb:Q9WUH7 PRIDE:Q9WUH7
Ensembl:ENSMUST00000026225 Ensembl:ENSMUST00000179305 GeneID:26456
KEGG:mmu:26456 UCSC:uc008hqf.1 InParanoid:Q9WUH7 OMA:LTTQWKT
NextBio:304561 Bgee:Q9WUH7 Genevestigator:Q9WUH7
GermOnline:ENSMUSG00000025207 Uniprot:Q9WUH7
Length = 837
Score = 291 (107.5 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 71/196 (36%), Positives = 98/196 (50%)
Query: 47 YVFFFFRETAVEYINCGKSVF--SRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEF 104
Y FF RE +S +RVARVCK D GGK IL + W ++LKARL C IP
Sbjct: 239 YFFFMEREEGSSSFTQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP--- 295
Query: 105 PFYFNEIQDIYKVPGDD---TKFYGVFTTSTTG--LMGSAICSFSIEDIERAFVGKFKEQ 159
+ ++ + + D T FY VFT +T L SAIC + + +I+ F G F E
Sbjct: 296 --QYETLRGVCSLNADTSSHTHFYAVFTLTTQWKTLEASAICRYDLAEIQAVFTGPFMEY 353
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDT---------ETLPDSVLNFIRSHPLMDEAVAHR 210
W VPEPRPG C+ D+ + LP VL+F++ HPLM V
Sbjct: 354 QDGARRW-GRYEGGVPEPRPGSCITDSLRSRGYNSSQDLPSLVLDFVKLHPLMARPVVPT 412
Query: 211 DNKPVFYRRDLLFTHL 226
+P+ +R++ +THL
Sbjct: 413 RGRPLLLKRNVRYTHL 428
>UNIPROTKB|Q9NTN9 [details] [associations]
symbol:SEMA4G "Semaphorin-4G" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 GO:GO:0016021
GO:GO:0005886 GO:GO:0007399 GO:GO:0030154 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.10 InterPro:IPR003599
SMART:SM00409 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 EMBL:AL133215 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
EMBL:AB046839 EMBL:BC051030 EMBL:BC128579 IPI:IPI00016629
IPI:IPI00018264 IPI:IPI00478294 RefSeq:NP_001190173.1
RefSeq:NP_060363.2 UniGene:Hs.591923 UniGene:Hs.735152
ProteinModelPortal:Q9NTN9 SMR:Q9NTN9 IntAct:Q9NTN9
MINT:MINT-1475595 STRING:Q9NTN9 PhosphoSite:Q9NTN9 DMDM:13633937
PaxDb:Q9NTN9 PRIDE:Q9NTN9 Ensembl:ENST00000210633
Ensembl:ENST00000370250 Ensembl:ENST00000517724
Ensembl:ENST00000521006 GeneID:57715 KEGG:hsa:57715 UCSC:uc001krw.2
UCSC:uc010qpt.1 CTD:57715 GeneCards:GC10P102719 HGNC:HGNC:10735
HPA:HPA038362 neXtProt:NX_Q9NTN9 PharmGKB:PA35657 eggNOG:NOG309161
OMA:YEFRSSP OrthoDB:EOG483D3Z ChiTaRS:SEMA4G GenomeRNAi:57715
NextBio:64634 ArrayExpress:Q9NTN9 Bgee:Q9NTN9 CleanEx:HS_SEMA4G
Genevestigator:Q9NTN9 GermOnline:ENSG00000095539 Uniprot:Q9NTN9
Length = 838
Score = 284 (105.0 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 70/199 (35%), Positives = 101/199 (50%)
Query: 48 VFFFFRETAVE-----YINCGKSV-FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP 101
V++FF E A E + S +RVARVCK D GGK IL + W ++LKARL C IP
Sbjct: 238 VYYFFTERATEEGSGSFTQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP 297
Query: 102 GEFPFYFNEIQDIYKVPGDD---TKFYGVFTTSTTG--LMGSAICSFSIEDIERAFVGKF 156
+ ++ + + + T FY FT ST L SAIC + + +I+ F G +
Sbjct: 298 -----LYETLRGVCSLDAETSSRTHFYAAFTLSTQWKTLEASAICRYDLAEIQAVFAGPY 352
Query: 157 KEQATSTSAWLPVLSSRVPEPRPGQCVNDT---------ETLPDSVLNFIRSHPLMDEAV 207
E + W VPEPRPG C+ D+ + LP VL+F++ HPLM V
Sbjct: 353 MEYQDGSRRW-GRYEGGVPEPRPGSCITDSLRSQGYNSSQDLPSLVLDFVKLHPLMARPV 411
Query: 208 AHRDNKPVFYRRDLLFTHL 226
+P+ +R++ +THL
Sbjct: 412 VPTRGRPLLLKRNIRYTHL 430
>UNIPROTKB|E2RP18 [details] [associations]
symbol:SEMA4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 Gene3D:2.130.10.10
InterPro:IPR003599 SMART:SM00409 GO:GO:0004872 InterPro:IPR003659
SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 OMA:LTTQWKT
EMBL:AAEX03015473 Ensembl:ENSCAFT00000015460 Uniprot:E2RP18
Length = 803
Score = 275 (101.9 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 67/196 (34%), Positives = 97/196 (49%)
Query: 48 VFFFFRETAVE-----YINCGKSV-FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP 101
V++FF E A + + S +RVARVCK D GGK IL + W ++LKARL C IP
Sbjct: 238 VYYFFTERATDEGPNSFAQSRNSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP 297
Query: 102 GEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTG--LMGSAICSFSIEDIERAFVGKFKEQ 159
++ + + T FY FT +T L SAIC + + +++ F G + E
Sbjct: 298 -QYEM-LRAVCSLNADTSAHTHFYAAFTLTTQWKTLEASAICRYDLAELQAVFAGPYMEY 355
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDT---------ETLPDSVLNFIRSHPLMDEAVAHR 210
W VPEPRPG C+ D+ + LP VL+F++ HPLM V
Sbjct: 356 QDGARRW-GRYEGGVPEPRPGSCITDSLRTRGYHSSQDLPSLVLDFVKLHPLMARPVVPT 414
Query: 211 DNKPVFYRRDLLFTHL 226
+P+ +R + +THL
Sbjct: 415 RGRPLLLKRSVRYTHL 430
Score = 47 (21.6 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 332 VDGGLVIMAVEELDAGKYDCWL---G-NTVLCTHNLTVDAHSNVADAP 375
VDG L++ ++ +G Y C+ G T+L +++LTV + A AP
Sbjct: 615 VDG-LLVTDIQPEHSGNYGCYAEENGLRTLLASYSLTVRP-ATPAPAP 660
>UNIPROTKB|A6QLV9 [details] [associations]
symbol:SEMA4G "SEMA4G protein" species:9913 "Bos taurus"
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016020 Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 HOVERGEN:HBG061165 KO:K06521
GeneTree:ENSGT00560000076864 CTD:57715 eggNOG:NOG309161
OrthoDB:EOG483D3Z OMA:LTTQWKT EMBL:DAAA02058980 EMBL:BC148103
IPI:IPI00705923 RefSeq:NP_001094587.1 UniGene:Bt.62812
STRING:A6QLV9 Ensembl:ENSBTAT00000024759 GeneID:524002
KEGG:bta:524002 InParanoid:A6QLV9 NextBio:20873868 Uniprot:A6QLV9
Length = 844
Score = 281 (104.0 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 68/196 (34%), Positives = 97/196 (49%)
Query: 48 VFFFFRETAVE-----YINCGKSV-FSRVARVCKRDTGGKNILSQNWATYLKARLNCSIP 101
V++FF E A E + S +RVARVCK D GGK IL + W ++LKARL C IP
Sbjct: 238 VYYFFTERAAEEGAGSFAQSRSSHRVARVARVCKGDLGGKKILQKKWTSFLKARLICHIP 297
Query: 102 GEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTG--LMGSAICSFSIEDIERAFVGKFKEQ 159
++ + + T FY FT +T L SAIC + + +++ F G + E
Sbjct: 298 -QYEM-LRSVCSLQADTSAHTHFYAAFTLTTQWKTLEASAICRYDLAEVQAVFAGPYMEY 355
Query: 160 ATSTSAWLPVLSSRVPEPRPGQCVNDT---------ETLPDSVLNFIRSHPLMDEAVAHR 210
W VPEPRPG C+ D+ + LP VL+F++ HPLM V
Sbjct: 356 QDGVRRW-GRYEGGVPEPRPGSCITDSLRSRGYNSSQDLPSLVLDFVKLHPLMARPVVPT 414
Query: 211 DNKPVFYRRDLLFTHL 226
+P+ +R + +THL
Sbjct: 415 RGRPLLLKRSVRYTHL 430
>ZFIN|ZDB-GENE-060503-363 [details] [associations]
symbol:sema4ab "sema domain, immunoglobulin domain
(Ig), transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4Ab" species:7955 "Danio rerio" [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-060503-363 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 EMBL:CR749746
EMBL:BX927177 IPI:IPI00617207 Ensembl:ENSDART00000090081
ArrayExpress:F1R501 Bgee:F1R501 Uniprot:F1R501
Length = 831
Score = 271 (100.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 77/238 (32%), Positives = 120/238 (50%)
Query: 36 PDFVGSYDIG--KYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
P F+ S I + V+FFF E EY K SRVA+VC D GG+ L + W T+ K
Sbjct: 215 PTFISSTYIHSEEKVYFFFSEIGKEYDFIDKFTVSRVAQVCTSDVGGQRTLQKRWTTFAK 274
Query: 94 ARLNCSIPGEFPFYFNEIQDIYKV-P--G---DDTKFYGVFTTSTTGLMG-SAICSFSIE 146
A+L C E P+ N +QD+ + P G D+T FYG+FT+ +G SA+C+FS++
Sbjct: 275 AQLLCQADQELPY--NVLQDVISLSPPEGASEDETLFYGIFTSQWRVNLGRSAVCAFSLK 332
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEP--RPGQCVNDTETLPDSVLNFIRSHPLMD 204
DI++ F G++K T W S+RV E PG+C D+ L F++ + L D
Sbjct: 333 DIKKVFTGRYKVLNRDTLKW----STRVQEQMANPGEC--GLHNASDNTLRFVKDNFLAD 386
Query: 205 EAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEY--IVYFAATTTL--RTVFVK 258
++V + D ++++ VQ G +Y ++Y + +TV +K
Sbjct: 387 KSVLPVNQGLTVVSPDKSYSNIAAQRVQ----GARGKYYTVLYLLTESGFLHKTVLLK 440
>ZFIN|ZDB-GENE-030131-3633 [details] [associations]
symbol:sema7a "semaphorin 7A" species:7955 "Danio
rerio" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 ZFIN:ZDB-GENE-030131-3633
GO:GO:0007275 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
EMBL:CR376804 EMBL:CR391977 IPI:IPI00889397
Ensembl:ENSDART00000127274 Bgee:E7FBE1 Uniprot:E7FBE1
Length = 640
Score = 247 (92.0 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 62/206 (30%), Positives = 101/206 (49%)
Query: 35 QPDFVGSY-------DIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
+P F+ S+ + + ++ FRE + SRVARVCK D GG QN
Sbjct: 200 EPTFISSFLAKRKNDSLNEKIYVLFREKNSDTSPEADPWISRVARVCKIDEGGSKQFLQN 259
Query: 88 -WATYLKARLNCSIPGEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIE 146
W ++LKARL C IP E YFN +QD++ +D + V+ ++ +A+C +S+
Sbjct: 260 IWTSFLKARLVCGIPKE-SLYFNRLQDVFVQHAEDWRDSLVYALFSSSWNSTAVCIYSLA 318
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEA 206
D++ F E++ S +P PRPG+CV ++ +LP L I+ +P M +
Sbjct: 319 DLDDIF-----EKSNYKG-----FSEAIPNPRPGKCVENSNSLPIPTLKIIKDYPEMKDW 368
Query: 207 VAHRDNKPVFYRRDLLFTHLVVDVVQ 232
+ F+ FT +VVD ++
Sbjct: 369 IHPIQKDTPFFTSSKNFTKIVVDQIR 394
>UNIPROTKB|Q8AXA8 [details] [associations]
symbol:SEMA3F "Secreted chemorepellent semaphorin 3F"
species:9031 "Gallus gallus" [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048843
"negative regulation of axon extension involved in axon guidance"
evidence=IEA] InterPro:IPR001627 InterPro:IPR015943 Pfam:PF01403
PROSITE:PS51004 Gene3D:2.130.10.10 GO:GO:0045499 SUPFAM:SSF101912
HOGENOM:HOG000039964 InterPro:IPR027231 PANTHER:PTHR11036
HSSP:Q92854 GeneTree:ENSGT00690000102148 eggNOG:NOG320723
OrthoDB:EOG470TGQ EMBL:AADN02014605 EMBL:AADN02014606
EMBL:AADN02057536 EMBL:AADN02057537 EMBL:AF495525 IPI:IPI00684029
UniGene:Gga.14 ProteinModelPortal:Q8AXA8 STRING:Q8AXA8
Ensembl:ENSGALT00000030757 HOVERGEN:HBG103184 InParanoid:Q8AXA8
Uniprot:Q8AXA8
Length = 160
Score = 215 (80.7 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 45/112 (40%), Positives = 65/112 (58%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGE--FP 105
++FFFRE + + V+SR+ R+C D GG L W+T+LKARL CS+PG
Sbjct: 49 LYFFFREKSAD-APLSPGVYSRIGRICLNDDGGHCCLVNKWSTFLKARLVCSVPGPDGIE 107
Query: 106 FYFNEIQDIYKVPGDDTK---FYGVFTTSTTGLMGSAICSFSIEDIERAFVG 154
+F+E+QD++ DTK Y VF+ S + GSA+C +S+ DI F G
Sbjct: 108 THFDELQDVFIQQTQDTKNPVIYAVFSASGSVFKGSAVCVYSMADIRMVFNG 159
>ZFIN|ZDB-GENE-110411-86 [details] [associations]
symbol:sema4aa "sema domain, immunoglobulin domain
(Ig), transmembrane domain (TM) and short cytoplasmic domain,
(semaphorin) 4Aa" species:7955 "Danio rerio" [GO:0004872 "receptor
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-110411-86 GO:GO:0016021 GO:GO:0007275
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076864 EMBL:BX005234
IPI:IPI00901718 RefSeq:XP_001338626.3 Ensembl:ENSDART00000114601
GeneID:798168 KEGG:dre:798168 NextBio:20933300 Bgee:E7FAU7
Uniprot:E7FAU7
Length = 739
Score = 235 (87.8 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 77/228 (33%), Positives = 111/228 (48%)
Query: 35 QPDFVGSYDI---GKYVFFFFRETAVEYINCGKS-VFSRVARVCKRDTGGKNILSQNWAT 90
+P F+ S + GK + FF + G S SRVA+VC D GG L + W +
Sbjct: 211 EPVFISSTHVASEGKILLFFTENGDLSGDYFGNSFTVSRVAQVCTDDNGGTLTLQRRWTS 270
Query: 91 YLKARLNCSIPGEFPFYFNEIQDIYKV-PGDD-----TKFYGVFTTSTTGLMG-SAICSF 143
+ KA+L C GE FN++QDI K+ P D T FYGVFT+ + G SA+C+F
Sbjct: 271 FAKAQLVCQ-QGE-DLQFNKLQDIVKLSPSDSDSPDKTLFYGVFTSQRSVSSGLSAVCAF 328
Query: 144 SIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--VNDTETLPDSVLNFIRSHP 201
S+ DI+ AF G +K + W P ++ + + G+C NDT DSVLN ++
Sbjct: 329 SLTDIKAAFSGNYKTFDLRGNHWSPQPNT---DGKLGKCGLFNDT----DSVLNRVKKSF 381
Query: 202 LMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAAT 249
L + V D + + +T L V Q V G T Y + + T
Sbjct: 382 LTENVVHPMDKTLLLSSAEEQYTRLAVHRAQ-AVDGQT--YTILYLLT 426
>WB|WBGene00004890 [details] [associations]
symbol:smp-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 GO:GO:0016020 Gene3D:2.130.10.10
GO:GO:0004872 InterPro:IPR003659 SMART:SM00423 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 EMBL:FO080997 RefSeq:NP_491197.3
ProteinModelPortal:Q9TYS4 SMR:Q9TYS4 PaxDb:Q9TYS4
EnsemblMetazoa:D1037.2.1 EnsemblMetazoa:D1037.2.2 GeneID:183905
KEGG:cel:CELE_D1037.2 UCSC:D1037.2 CTD:183905 WormBase:D1037.2
eggNOG:NOG292453 OMA:GASAICK NextBio:922800 Uniprot:Q9TYS4
Length = 649
Score = 226 (84.6 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 48/131 (36%), Positives = 71/131 (54%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKA 94
Q +F+ + + K V FFF E+ +E CG +RV RVC+ D GG+ ++ W++Y KA
Sbjct: 209 QANFLSMHKVKKEVLFFFSESPMETEGCGLHKVARVGRVCEDDPGGRLSYNKEWSSYEKA 268
Query: 95 RLNCSIP--GEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAF 152
R+ CSI FYFN+ + + P T FYG F + G+ SAIC +S + I +F
Sbjct: 269 RIECSIEETDTDTFYFNQFAGVAESP---TSFYGAFRSQLAGIGASAICKYSKKVISGSF 325
Query: 153 VGKFKEQATST 163
+KE T
Sbjct: 326 ASGYKESTPDT 336
>UNIPROTKB|F1NIZ9 [details] [associations]
symbol:SEMA7A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0045773 "positive regulation of
axon extension" evidence=IEA] [GO:0050727 "regulation of
inflammatory response" evidence=IEA] [GO:0060907 "positive
regulation of macrophage cytokine production" evidence=IEA]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS51004 SMART:SM00630 GO:GO:0016021 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
GO:GO:0009897 GO:GO:0004872 GO:GO:0050727 InterPro:IPR003659
SMART:SM00423 GO:GO:0060907 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
OMA:EPMGPLK EMBL:AADN02051005 IPI:IPI00590256
Ensembl:ENSGALT00000002152 Uniprot:F1NIZ9
Length = 587
Score = 218 (81.8 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 70/209 (33%), Positives = 101/209 (48%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN-WATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++CK D GG + LS + W T+LKA L C P
Sbjct: 167 IYYFFREDNPDKSPEAPRNISRVAQLCKEDKGGTSSLSASKWTTFLKASLICVDPAT-KG 225
Query: 107 YFNEIQDIYKVPGD---DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATST 163
FN +QD++ VP D+K YG+FT +T G SA+C +S DI+ F T
Sbjct: 226 NFNWLQDVFFVPASNWRDSKVYGLFT-NTWG--SSAVCVYSFGDIDNVF---------RT 273
Query: 164 SAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLF 223
S L + PE +PGQCV + P SHP +++ V +P+ R LF
Sbjct: 274 SK-LKGYNGPNPEIKPGQCVPSGQHTPSETFKIADSHPEVEDRV-----EPLAPTRSPLF 327
Query: 224 --THLVVDVVQYEVFGTTS-EYIVYFAAT 249
H + +EV + +Y V + AT
Sbjct: 328 HNKHRYQKIGVHEVSASDGRQYTVLYLAT 356
>ZFIN|ZDB-GENE-060503-473 [details] [associations]
symbol:si:ch211-113g11.6 "si:ch211-113g11.6"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630
ZFIN:ZDB-GENE-060503-473 GO:GO:0007275 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0004872 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00690000101974 EMBL:AL954306
IPI:IPI00915158 Ensembl:ENSDART00000115260 ArrayExpress:F1QJ07
Bgee:F1QJ07 Uniprot:F1QJ07
Length = 632
Score = 218 (81.8 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 57/189 (30%), Positives = 94/189 (49%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGG-KNILSQNWATYLKARLNCSIPGEFPF 106
++FFF E + +R+ RVC D GG +N+L +W T+LKAR+ C G P
Sbjct: 214 IYFFFSEVNSSSSLDEEPYRARIGRVCMVDEGGLQNVLPNSWTTFLKARVMCGKSGT-PV 272
Query: 107 YFNEIQDIYKVPGD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTS 164
+N + + + YG+F+ + + +C++SIEDI++AF +S
Sbjct: 273 QYNNFKQAFVLTSHLRTGLIYGIFSNAWNT---TVVCAYSIEDIDKAF----------SS 319
Query: 165 AWLPVLSSRVPEPRPGQCV--NDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLL 222
+ L +S + PRPG C N+T+ +L+ IR HP ++E + + P+
Sbjct: 320 SKLKGYNSPLANPRPGTCAFKNNTQAHNQKILSVIRDHPEIEEVIGPVHDVPLELSVQDH 379
Query: 223 FTHLVVDVV 231
FTH+V D V
Sbjct: 380 FTHIVADTV 388
>UNIPROTKB|I3LQF4 [details] [associations]
symbol:SEMA7A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0060907 "positive regulation of macrophage
cytokine production" evidence=IEA] [GO:0050727 "regulation of
inflammatory response" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 Pfam:PF01403 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0009897 InterPro:IPR003599 SMART:SM00409
GO:GO:0050727 GO:GO:0045773 GO:GO:0060907 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
OMA:EPMGPLK Ensembl:ENSSSCT00000023029 Uniprot:I3LQF4
Length = 601
Score = 211 (79.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 61/180 (33%), Positives = 92/180 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 190 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDTATNK- 248
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI+R F
Sbjct: 249 NFNRLQDVFLLPDPNGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDRVF--------- 296
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAH--RDNKPVFYRR 219
TSA L +P+PRPG+C+ D + +P SHP + + V R P+F+ +
Sbjct: 297 RTSA-LRGYHKDLPDPRPGKCLPDRQAIPTETFQVADSHPEVVQRVEPMGRLKTPLFHSK 355
>UNIPROTKB|E1BNR9 [details] [associations]
symbol:SEMA7A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0060907 "positive regulation of macrophage
cytokine production" evidence=IEA] [GO:0050727 "regulation of
inflammatory response" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0009897 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 GO:GO:0050727 GO:GO:0045773 InterPro:IPR003659
SMART:SM00423 GO:GO:0060907 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
OMA:EPMGPLK EMBL:DAAA02052504 EMBL:DAAA02052505 EMBL:DAAA02052506
EMBL:DAAA02052507 IPI:IPI00693110 Ensembl:ENSBTAT00000015210
Uniprot:E1BNR9
Length = 666
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 56/160 (35%), Positives = 83/160 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 238 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCS-DATTNK 296
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI++ F T
Sbjct: 297 NFNRLQDVFLLPDPNGQWKDTRVYGVFSNPWNY---SAVCVYSLGDIDKVF-------CT 346
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHP 201
S+ L S +P PRPG+C+ D + +P SHP
Sbjct: 347 SS---LKGYHSSLPNPRPGKCLPDRQPIPTETFQVADSHP 383
>UNIPROTKB|F5GYX3 [details] [associations]
symbol:SEMA7A "Semaphorin-7A" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0009897 "external side of
plasma membrane" evidence=IEA] [GO:0050727 "regulation of
inflammatory response" evidence=IEA] [GO:0060907 "positive
regulation of macrophage cytokine production" evidence=IEA]
InterPro:IPR001627 InterPro:IPR002165 InterPro:IPR007110
InterPro:IPR015943 InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437
PROSITE:PS50835 PROSITE:PS51004 SMART:SM00630 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 Gene3D:2.130.10.10
GO:GO:0009897 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
GO:GO:0050727 InterPro:IPR003659 SMART:SM00423 EMBL:AC090826
GO:GO:0060907 SUPFAM:SSF103575 SUPFAM:SSF101912 InterPro:IPR027231
PANTHER:PTHR11036 EMBL:AC012435 RefSeq:NP_001139502.1
UniGene:Hs.24640 GeneID:8482 KEGG:hsa:8482 CTD:8482 HGNC:HGNC:10741
KO:K06529 ChiTaRS:SEMA7A GenomeRNAi:8482 NextBio:31739
IPI:IPI00925507 ProteinModelPortal:F5GYX3 SMR:F5GYX3 PRIDE:F5GYX3
Ensembl:ENST00000542748 ArrayExpress:F5GYX3 Bgee:F5GYX3
Uniprot:F5GYX3
Length = 501
Score = 201 (75.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/166 (33%), Positives = 85/166 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 75 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDAATNK- 133
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI++ F T
Sbjct: 134 NFNRLQDVFLLPDPSGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDKVF-------RT 183
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
S+ L S +P PRPG+C+ D + +P HP + + V
Sbjct: 184 SS---LKGYHSSLPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRV 226
>UNIPROTKB|F1P8T3 [details] [associations]
symbol:SEMA7A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0060907 "positive regulation of
macrophage cytokine production" evidence=IEA] [GO:0050727
"regulation of inflammatory response" evidence=IEA] [GO:0045773
"positive regulation of axon extension" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0009897 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 GO:GO:0050727 GO:GO:0045773 InterPro:IPR003659
SMART:SM00423 GO:GO:0060907 SUPFAM:SSF103575 SUPFAM:SSF101912
InterPro:IPR027231 PANTHER:PTHR11036 GeneTree:ENSGT00690000101974
OMA:EPMGPLK EMBL:AAEX03016308 Ensembl:ENSCAFT00000028433
Uniprot:F1P8T3
Length = 561
Score = 201 (75.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 57/166 (34%), Positives = 85/166 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 133 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDVTTNK- 191
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI+R F T
Sbjct: 192 NFNRLQDVFLLPDPNGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDRVF-------RT 241
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
S+ L +P PRPG+C+ D + +P SHP + + V
Sbjct: 242 SS---LKGYHMSLPNPRPGKCLPDRQPIPTETFQVADSHPEVAQRV 284
>UNIPROTKB|O75326 [details] [associations]
symbol:SEMA7A "Semaphorin-7A" species:9606 "Homo sapiens"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0050727 "regulation of inflammatory response"
evidence=ISS] [GO:0060907 "positive regulation of macrophage
cytokine production" evidence=ISS] [GO:0009897 "external side of
plasma membrane" evidence=ISS] [GO:0045773 "positive regulation of
axon extension" evidence=IDA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IDA] [GO:0070374 "positive regulation
of ERK1 and ERK2 cascade" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 GO:GO:0007275 Reactome:REACT_111045 GO:GO:0007411
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006955 GO:GO:0016020
Gene3D:2.130.10.10 GO:GO:0009897 GO:GO:0031225 GO:GO:0006954
InterPro:IPR003599 SMART:SM00409 GO:GO:0070374 GO:GO:0004872
GO:GO:0050727 GO:GO:0007229 GO:GO:0045773 InterPro:IPR003659
SMART:SM00423 EMBL:AC090826 GO:GO:0060907 SUPFAM:SSF103575
SUPFAM:SSF101912 PDB:3NVQ PDBsum:3NVQ InterPro:IPR027231
PANTHER:PTHR11036 EMBL:AF030698 EMBL:AF030697 EMBL:AF069493
EMBL:AF071542 EMBL:AM180445 EMBL:AM180446 EMBL:AM180447
EMBL:AM180448 EMBL:AM180449 EMBL:AM180450 EMBL:AM180451
EMBL:AK293280 EMBL:AY885237 EMBL:AC012435 EMBL:BC101643
EMBL:BC101647 IPI:IPI00025257 IPI:IPI00924680 RefSeq:NP_001139501.1
RefSeq:NP_001139502.1 RefSeq:NP_003603.1 UniGene:Hs.24640
ProteinModelPortal:O75326 SMR:O75326 IntAct:O75326
MINT:MINT-1958248 STRING:O75326 PhosphoSite:O75326 PaxDb:O75326
PeptideAtlas:O75326 PRIDE:O75326 Ensembl:ENST00000261918
Ensembl:ENST00000543145 GeneID:8482 KEGG:hsa:8482 UCSC:uc002axv.3
CTD:8482 GeneCards:GC15M074701 HGNC:HGNC:10741 HPA:HPA042273
MIM:607961 MIM:614745 neXtProt:NX_O75326 PharmGKB:PA35663
eggNOG:NOG277924 HOGENOM:HOG000154284 HOVERGEN:HBG079171
InParanoid:O75326 KO:K06529 OMA:EPMGPLK OrthoDB:EOG4N30ND
PhylomeDB:O75326 ChiTaRS:SEMA7A EvolutionaryTrace:O75326
GenomeRNAi:8482 NextBio:31739 ArrayExpress:O75326 Bgee:O75326
CleanEx:HS_SEMA7A Genevestigator:O75326 GermOnline:ENSG00000138623
Uniprot:O75326
Length = 666
Score = 201 (75.8 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 56/166 (33%), Positives = 85/166 (51%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 240 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCSDAATNK- 298
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI++ F T
Sbjct: 299 NFNRLQDVFLLPDPSGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDKVF-------RT 348
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
S+ L S +P PRPG+C+ D + +P HP + + V
Sbjct: 349 SS---LKGYHSSLPNPRPGKCLPDQQPIPTETFQVADRHPEVAQRV 391
>UNIPROTKB|Q5TCJ7 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9606 "Homo sapiens"
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0008360 "regulation of
cell shape" evidence=IEA] [GO:0010594 "regulation of endothelial
cell migration" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IEA] [GO:0045063 "T-helper 1 cell
differentiation" evidence=IEA] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0007409
GO:GO:0016525 GO:GO:0010594 GO:GO:0045063 EMBL:AL135927
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
UniGene:Hs.408846 HGNC:HGNC:10729 HOVERGEN:HBG072910
IPI:IPI00645285 SMR:Q5TCJ7 STRING:Q5TCJ7 Ensembl:ENST00000414683
HOGENOM:HOG000202209 Uniprot:Q5TCJ7
Length = 220
Score = 177 (67.4 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 134 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 193
Query: 98 CSIPGEFPFYFNEIQDIYKVPGD 120
C+ PG+ PF N I+ +P D
Sbjct: 194 CTQPGQLPF--NVIRHAVLLPAD 214
>MGI|MGI:1306826 [details] [associations]
symbol:Sema7a "sema domain, immunoglobulin domain (Ig), and
GPI membrane anchor, (semaphorin) 7A" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005178 "integrin
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0045773
"positive regulation of axon extension" evidence=ISO] [GO:0050727
"regulation of inflammatory response" evidence=IDA] [GO:0060907
"positive regulation of macrophage cytokine production"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISO;IDA] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 MGI:MGI:1306826 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0009897 GO:GO:0031225 GO:GO:0006954
InterPro:IPR003599 SMART:SM00409 GO:GO:0070374 GO:GO:0004872
Reactome:REACT_127416 GO:GO:0050727 GO:GO:0007229 GO:GO:0045773
InterPro:IPR003659 SMART:SM00423 GO:GO:0060907 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 CTD:8482 eggNOG:NOG277924
HOGENOM:HOG000154284 HOVERGEN:HBG079171 KO:K06529 OMA:EPMGPLK
OrthoDB:EOG4N30ND EMBL:AB017532 EMBL:AF030699 EMBL:AF176670
EMBL:BC057875 IPI:IPI00315280 RefSeq:NP_035482.1 UniGene:Mm.335187
ProteinModelPortal:Q9QUR8 SMR:Q9QUR8 STRING:Q9QUR8
PhosphoSite:Q9QUR8 PaxDb:Q9QUR8 PRIDE:Q9QUR8
Ensembl:ENSMUST00000043059 GeneID:20361 KEGG:mmu:20361
UCSC:uc009pvy.1 InParanoid:Q9QUR8 NextBio:298249 Bgee:Q9QUR8
Genevestigator:Q9QUR8 GermOnline:ENSMUSG00000038264 Uniprot:Q9QUR8
Length = 664
Score = 195 (73.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/166 (33%), Positives = 83/166 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 238 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCS-DAATNR 296
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI+R F T
Sbjct: 297 NFNRLQDVFLLPDPSGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDRVF-------RT 346
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
S+ L +P PRPG C+ + +P SHP + + V
Sbjct: 347 SS---LKGYHMGLPNPRPGMCLPKKQPIPTETFQVADSHPEVAQRV 389
>RGD|1305192 [details] [associations]
symbol:Sema7a "semaphorin 7A, GPI membrane anchor" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA;ISO] [GO:0007229
"integrin-mediated signaling pathway" evidence=IEA;ISO] [GO:0009897
"external side of plasma membrane" evidence=IEA;ISO] [GO:0045773
"positive regulation of axon extension" evidence=IEA;ISO]
[GO:0050727 "regulation of inflammatory response" evidence=IEA;ISO]
[GO:0060907 "positive regulation of macrophage cytokine production"
evidence=IEA;ISO] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA;ISO] InterPro:IPR001627 InterPro:IPR002165
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835 PROSITE:PS51004
SMART:SM00630 RGD:1305192 Gene3D:2.60.40.10 InterPro:IPR013783
Gene3D:2.130.10.10 GO:GO:0009897 InterPro:IPR003599 SMART:SM00409
GO:GO:0004872 GO:GO:0050727 GO:GO:0045773 EMBL:CH473975
InterPro:IPR003659 SMART:SM00423 GO:GO:0060907 SUPFAM:SSF103575
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00690000101974 CTD:8482 KO:K06529 OMA:EPMGPLK
OrthoDB:EOG4N30ND IPI:IPI00371101 RefSeq:NP_001101623.1
UniGene:Rn.214059 Ensembl:ENSRNOT00000010620 GeneID:315711
KEGG:rno:315711 UCSC:RGD:1305192 NextBio:669710 Uniprot:D3ZQP6
Length = 666
Score = 195 (73.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 56/166 (33%), Positives = 83/166 (50%)
Query: 48 VFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILS-QNWATYLKARLNCSIPGEFPF 106
+++FFRE + SRVA++C+ D GG++ LS W T+LKA L CS
Sbjct: 238 IYYFFREDNPDKNPEAPLNVSRVAQLCRGDQGGESSLSVSKWNTFLKAMLVCS-DAATNR 296
Query: 107 YFNEIQDIYKVP---GD--DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQAT 161
FN +QD++ +P G DT+ YGVF+ SA+C +S+ DI+R F T
Sbjct: 297 NFNRLQDVFLLPDPSGQWRDTRVYGVFSNPWNY---SAVCVYSLGDIDRVF-------RT 346
Query: 162 STSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAV 207
S+ L +P PRPG C+ + +P SHP + + V
Sbjct: 347 SS---LKGYHMGLPNPRPGMCLPKKQPIPTETFQVADSHPEVAQRV 389
>UNIPROTKB|Q5TCI6 [details] [associations]
symbol:SEMA4A "Semaphorin-4A" species:9606 "Homo sapiens"
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0008360 "regulation of
cell shape" evidence=IEA] [GO:0010594 "regulation of endothelial
cell migration" evidence=IEA] [GO:0016525 "negative regulation of
angiogenesis" evidence=IEA] [GO:0045063 "T-helper 1 cell
differentiation" evidence=IEA] [GO:0071526 "semaphorin-plexin
signaling pathway" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0008360 GO:GO:0007409
GO:GO:0016525 GO:GO:0010594 GO:GO:0045063 EMBL:AL135927
SUPFAM:SSF101912 GO:GO:0071526 InterPro:IPR027231 PANTHER:PTHR11036
HOGENOM:HOG000116087 HOVERGEN:HBG061165 UniGene:Hs.408846
HGNC:HGNC:10729 IPI:IPI00640504 SMR:Q5TCI6 STRING:Q5TCI6
Ensembl:ENST00000435124 Uniprot:Q5TCI6
Length = 321
Score = 177 (67.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 38 FVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLN 97
FV + + V+FFF ETA E+ + SRVARVCK D GG+ +L + W T+LKA+L
Sbjct: 233 FVAAIPSTQVVYFFFEETASEFDFFERLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLL 292
Query: 98 CSIPGEFPFYFNEIQDIYKVPGD 120
C+ PG+ PF N I+ +P D
Sbjct: 293 CTQPGQLPF--NVIRHAVLLPAD 313
>UNIPROTKB|D6RAF4 [details] [associations]
symbol:SEMA5A "Semaphorin-5A" species:9606 "Homo sapiens"
[GO:0001569 "patterning of blood vessels" evidence=IEA] [GO:0008046
"axon guidance receptor activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001627
InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004 SMART:SM00630
GO:GO:0016021 Gene3D:2.130.10.10 GO:GO:0001569 GO:GO:0008046
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036 EMBL:AC022446
EMBL:AC027336 EMBL:AC091906 HGNC:HGNC:10736 HOGENOM:HOG000232047
EMBL:AC021088 EMBL:AC027335 EMBL:AC034214 IPI:IPI00964483
ProteinModelPortal:D6RAF4 SMR:D6RAF4 Ensembl:ENST00000513968
ArrayExpress:D6RAF4 Bgee:D6RAF4 Uniprot:D6RAF4
Length = 254
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 27/40 (67%), Positives = 34/40 (85%)
Query: 35 QPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVC 74
+P+FV SYDIG + +FFFRE AVE+ +CGK+VFSR ARVC
Sbjct: 216 EPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVC 254
>UNIPROTKB|F1SBX4 [details] [associations]
symbol:SEMA3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] InterPro:IPR001627
InterPro:IPR007110 InterPro:IPR015943 InterPro:IPR016201
Pfam:PF01403 PROSITE:PS50835 PROSITE:PS51004 GO:GO:0007275
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
Gene3D:2.130.10.10 InterPro:IPR003599 SMART:SM00409 GO:GO:0004872
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003659 SMART:SM00423
SUPFAM:SSF103575 SUPFAM:SSF101912 KO:K06840 InterPro:IPR027231
PANTHER:PTHR11036 GeneTree:ENSGT00560000076660 CTD:223117
EMBL:AEMK01185048 EMBL:CU930032 RefSeq:XP_003130267.3
Ensembl:ENSSSCT00000016771 GeneID:100523915 KEGG:ssc:100523915
OMA:NATKNER Uniprot:F1SBX4
Length = 416
Score = 131 (51.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 41/138 (29%), Positives = 62/138 (44%)
Query: 147 DIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC--------VNDTETLPDSVLNFIR 198
DI F G + + ++ W+ R+P PRPG C + T PD V++FI+
Sbjct: 3 DIRAVFNGPYAHKESADHRWVQY-DGRIPYPRPGTCPSRTYDPLIKSTRDFPDDVISFIK 61
Query: 199 SHPLMDEAVAHRDNKPVFYRR--DLLFTHLVVDVVQYEVFGTTSEYIVYFAATTTLRTVF 256
HP+M ++V P F R D T +VVD V E +Y V F T + TV
Sbjct: 62 RHPVMYKSVYPVVGGPTFKRINVDYRLTQIVVDHVVAE----DGQYDVMFLGTD-IGTVL 116
Query: 257 VKVRLLQDVSNTSDSICE 274
V + ++ N + + E
Sbjct: 117 KVVSISKEKWNMEEVVLE 134
Score = 67 (28.6 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 289 SVHLSCFVKLPASMANQPMSWY-HYSKDKGRYQIKFRSDKFIRTVDGGLVIMAVEELDAG 347
S L C +P S + WY S D+ R ++K ++ I+T + GL+I ++++ D+G
Sbjct: 247 STFLEC---IPKSQ-QASIKWYLQRSGDEHREELK-PDERIIKT-EYGLLIRSLQKKDSG 300
Query: 348 KYDC 351
Y C
Sbjct: 301 MYYC 304
Score = 42 (19.8 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 314 KDKGRYQIKFRSDKFIRTV 332
KD G Y K + FI TV
Sbjct: 297 KDSGMYYCKAQEHTFIHTV 315
>UNIPROTKB|Q8JL80 [details] [associations]
symbol:EVM139 "Semaphorin-like protein 139" species:265874
"Ectromelia virus Moscow" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001627 InterPro:IPR015943 Pfam:PF01403
PROSITE:PS51004 SMART:SM00630 GO:GO:0005576 Gene3D:2.130.10.10
SUPFAM:SSF101912 PDB:3NVN PDBsum:3NVN InterPro:IPR027231
PANTHER:PTHR11036 EMBL:AF012825 EMBL:AJ574801 EMBL:AJ574802
EMBL:AJ574803 EMBL:AJ574804 EMBL:AJ574805 RefSeq:NP_671658.1
ProteinModelPortal:Q8JL80 IntAct:Q8JL80 GeneID:951586
ProtClustDB:PHA3092 EvolutionaryTrace:Q8JL80 Uniprot:Q8JL80
Length = 399
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 40 GSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN-WATYLKARLNC 98
G+YD K V+ F +T ++ K + +A++C D GG + LS + W+T+LK L C
Sbjct: 164 GTYD--K-VYILFTDT-IDTKRIVKIPY--IAQMCLNDEGGPSSLSSHRWSTFLKVELEC 217
Query: 99 SIPGEFPFYFNEIQDIYKVPGD-DTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFK 157
I G + +I + D DT Y VF S SA+C++S+ I+ +F
Sbjct: 218 DIDGRS---YRQIIHSKAIKTDNDTILY-VFFDSPYSK--SALCTYSMNAIKHSF----- 266
Query: 158 EQATSTSAWLPVLSSRVPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVF 216
STS L + ++P P PG C+ + +P + + I + +D+ + ++P+F
Sbjct: 267 ----STSK-LGGYTKQLPSPAPGICLPAGKVVPHTTFDIIEQYNELDDIIKPL-SQPIF 319
>UNIPROTKB|A6QQH8 [details] [associations]
symbol:SEMA4F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] InterPro:IPR001627
InterPro:IPR015512 InterPro:IPR015943 Pfam:PF01403 PROSITE:PS51004
SMART:SM00630 GO:GO:0016021 GO:GO:0007411 Gene3D:2.130.10.10
SUPFAM:SSF101912 InterPro:IPR027231 PANTHER:PTHR11036
GeneTree:ENSGT00560000076864 eggNOG:NOG258001
PANTHER:PTHR11036:SF13 HOGENOM:HOG000213826 EMBL:DAAA02030321
EMBL:DAAA02030322 EMBL:BC149838 IPI:IPI00866875 UniGene:Bt.32639
STRING:A6QQH8 Ensembl:ENSBTAT00000056323 NextBio:20875159
Uniprot:A6QQH8
Length = 302
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 35/100 (35%), Positives = 48/100 (48%)
Query: 34 LQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLK 93
L P G D ++FFF E A + + + RVARVC D GG+ L Q W T+LK
Sbjct: 201 LSPAEWGDEDGDDEIYFFFTEIARAFDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLK 260
Query: 94 ARLNCSIP--GEFPFYFNEIQDIYKVPGDDTK-FYGVFTT 130
A L C P G ++ + G T FYG+F++
Sbjct: 261 ADLLCPGPEHGRASSVLQDVAILRPEGGAGTPVFYGIFSS 300
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 378 0.00089 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 208
No. of states in DFA: 622 (66 KB)
Total size of DFA: 263 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.89u 0.10s 32.99t Elapsed: 00:00:05
Total cpu time: 32.94u 0.10s 33.04t Elapsed: 00:00:05
Start: Thu Aug 15 14:49:38 2013 End: Thu Aug 15 14:49:43 2013
WARNINGS ISSUED: 1