RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10772
(378 letters)
>d1q47a_ b.69.12.1 (A:) Semaphorin 3a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 495
Score = 223 bits (570), Expect = 3e-69
Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 26/238 (10%)
Query: 35 QPDFVGSYDI-------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNILSQN 87
P F+ ++ I V+FFFRE A++ + GK+ +R+ ++CK D GG L
Sbjct: 198 DPRFISAHLIPESDNPEDDKVYFFFRENAIDGEHSGKATHARIGQICKNDFGGHRSLVNK 257
Query: 88 WATYLKARLNCSIPGE--FPFYFNEIQDIYKVPG---DDTKFYGVFTTSTTGLMGSAICS 142
W T+LKARL CS+PG +F+E+QD++ + + YGVFTTS+ GSA+C
Sbjct: 258 WTTFLKARLICSVPGPNGIDTHFDELQDVFLMNSKDPKNPIVYGVFTTSSNIFKGSAVCM 317
Query: 143 FSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQC-------VNDTETLPDSVLN 195
+S+ D+ R F+G + + W+P RVP PRPG C + T+ LPD V+
Sbjct: 318 YSMSDVRRVFLGPYAHRDGPNYQWVPY-QGRVPYPRPGTCPSKTFGGFDSTKDLPDDVIT 376
Query: 196 FIRSHPLMDEAVAHRDNKPVFYRRDL--LFTHLVVDVVQYEVFGTTSEYIVYFAATTT 251
F RSHP M V +N+P+ + D+ FT +VVD V +Y V F T
Sbjct: 377 FARSHPAMYNPVFPINNRPIMIKTDVNYQFTQIVVDRVD----AEDGQYDVMFIGTDV 430
Score = 35.1 bits (80), Expect = 0.012
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1 MEISRTHRSLYVASDERIKQIALVMCAHRY 30
ME+S + LY+ S + Q+ L C Y
Sbjct: 467 MELSTKQQQLYIGSTAGVAQLPLHRC-DIY 495
>d1olza2 b.69.12.1 (A:3-480) Semaphorin 4d {Human (Homo sapiens)
[TaxId: 9606]}
Length = 478
Score = 210 bits (535), Expect = 3e-64
Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 31/241 (12%)
Query: 35 QPDFVGSYDI----------GKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNIL 84
+P FV + I V+FFF E +VEY + + R+ARVCK D GG L
Sbjct: 185 EPSFVFADVIRKSPDSPDGEDDRVYFFFTEVSVEYEFVFRVLIPRIARVCKGDQGGLRTL 244
Query: 85 SQNWATYLKARLNCSIPGEFPFYFNEIQDIYKVP---GDDTKFYGVFTTSTTGLMGSAIC 141
+ W ++LKARL CS P FN ++D++ + FY +FT + SA+C
Sbjct: 245 QKKWTSFLKARLICSRPDS-GLVFNVLRDVFVLRSPGLKVPVFYALFTPQLNNVGLSAVC 303
Query: 142 SFSIEDIERAFV-GKFKEQAT---STSAWLPVLSSRVPEPRPGQCVND---------TET 188
++++ E F GK+ + T S + W+ + VP+PRPG C++ +
Sbjct: 304 AYNLSTAEEVFSHGKYMQSTTVEQSHTKWVRY-NGPVPKPRPGACIDSEARAANYTSSLN 362
Query: 189 LPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQYEVFGTTSEYIVYFAA 248
LPD L F++ HPLMD++V DN+P ++D+ +T +VVD Q + Y V F +
Sbjct: 363 LPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNYTQIVVDRTQAL---DGTVYDVMFVS 419
Query: 249 T 249
T
Sbjct: 420 T 420
>d1shyb1 b.69.12.1 (B:40-515) Hepatocyte growth factor receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 476
Score = 149 bits (376), Expect = 3e-41
Identities = 43/278 (15%), Positives = 85/278 (30%), Gaps = 57/278 (20%)
Query: 24 VMCAHRYDNCLQPDFVGSYDIGKYVFFFFRETAVEYINCGKSVFSRVARVCKRDTGGKNI 83
+ + + +V +++ +++F + ++ +R+ R C ++G
Sbjct: 196 IDVLPEFRDSYPIKYVHAFESNNFIYFLTVQRETL---DAQTFHTRIIRFCSINSG---- 248
Query: 84 LSQNWATYLKARLNCSIPGEFP------FYFNEIQDIY------------KVPGDDTKFY 125
+Y++ L C + P FN +Q Y +D +
Sbjct: 249 ----LHSYMEMPLECILTELVPRGSTKKEVFNILQAAYVSKPGAQLARQIGASLNDDILF 304
Query: 126 GVFTTSTTGLM----GSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSRVPEPRPGQ 181
GVF S SA+C+F I+ + F + P
Sbjct: 305 GVFAQSKPDSAEPMDRSAMCAFPIKYVNDFFNKIVNKNNVRCLQH-------FYGPNHEH 357
Query: 182 CVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYR--RDLLFTHLVVDVVQYEVFGTT 239
C N T L +S R E +F ++L T + +
Sbjct: 358 CFNRT-LLRNSSGCEARRDEYRTEFTTALQRVDLFMGQFSEVLLTSISTFIKG------- 409
Query: 240 SEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSV 277
+ + T+ R F++V VS + S +
Sbjct: 410 -DLTIANLGTSEGR--FMQVV----VSRSGPSTPHVNF 440
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 42.6 bits (99), Expect = 4e-06
Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
T G SV L+C + + H+ K + L++ +V
Sbjct: 16 LTSLPGDSVTLTCPGV-----EPEDNATVHWVLRKPAAGSHPS---RWAGMGRRLLLRSV 67
Query: 342 EELDAGKYDCWLGNTVLCTHNLTVD 366
+ D+G Y C+ T +L VD
Sbjct: 68 QLHDSGNYSCYRAGRPAGTVHLLVD 92
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 40.9 bits (95), Expect = 1e-05
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 282 QTVTWGQSVHLSCFVKLP-ASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA 340
T G+ V L C V A++ K RY+I+ K I L+I
Sbjct: 10 TTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHI------LIIEG 63
Query: 341 VEELDAGKYDCWLGNTVLCTHNLTV 365
+ DA +Y + L+V
Sbjct: 64 ATKADAAEYSVMTTGGQ-SSAKLSV 87
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 38.1 bits (87), Expect = 2e-04
Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHY------SKDKGRYQIKFRSDKFIRTVDGG 335
TV G+ + VK + + W+ SK Q+K ++ R
Sbjct: 10 GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFE 69
Query: 336 LVIMAVEELDAGKYDCWLGN---TVLCTHNLTV 365
+ I+ ++ AG Y C + C+ +L V
Sbjct: 70 MQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEV 102
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 37.2 bits (85), Expect = 3e-04
Identities = 23/91 (25%), Positives = 29/91 (31%), Gaps = 9/91 (9%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V GQS + C V + KD + + K D GL I V
Sbjct: 11 TEVGEGQSANFYCRVI------ASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRV 64
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTVDAHS 369
+ D G+Y N T L V HS
Sbjct: 65 KGDDKGEYTVRAKNSYGTKEEIVFLNVTRHS 95
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 36.7 bits (84), Expect = 7e-04
Identities = 19/101 (18%), Positives = 28/101 (27%), Gaps = 6/101 (5%)
Query: 279 RLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVI 338
KQ + L C N + + K + + V L++
Sbjct: 6 IFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK---DCKPLLLDNIHFSGVKDRLIV 62
Query: 339 MAVEELDAGKYDCWLGNTVLCTH-NLTVDAHSNVAD--APT 376
M V E G Y C T L +T + PT
Sbjct: 63 MNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 103
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 36.6 bits (83), Expect = 8e-04
Identities = 20/95 (21%), Positives = 28/95 (29%), Gaps = 9/95 (9%)
Query: 282 QTVTWGQSVHLSC------FVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
VT G S+ S +K P + SK Q+ D+ +
Sbjct: 14 GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFE 73
Query: 336 LVIMAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367
L I + G Y C + NLTV
Sbjct: 74 LHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTVHE 108
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 35.9 bits (82), Expect = 9e-04
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG-LVIMA 340
V +V C PM + K+ ++ + R + L++ +
Sbjct: 15 HAVPAANTVKFRCPAG------GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMES 68
Query: 341 VEELDAGKYDCWLGN---TVLCTHNLTV 365
V D G Y C + N ++ T++L V
Sbjct: 69 VVPSDKGNYTCVVENEYGSINHTYHLDV 96
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 36.0 bits (82), Expect = 0.001
Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 9/87 (10%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
Q V G+SV L V + K + + Q L I+A
Sbjct: 10 QKVRAGESVELFGKVT------GTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAA 63
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTV 365
+ G Y + N + NLTV
Sbjct: 64 RQEHCGCYTLLVENKLGSRQAQVNLTV 90
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 35.8 bits (82), Expect = 0.001
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 11/77 (14%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKD-------KGRYQIKFRSDKFIRTVDGGLVIM 339
G ++L+ P + + + K + + +S F +G L I
Sbjct: 10 GHGINLNI----PNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIK 65
Query: 340 AVEELDAGKYDCWLGNT 356
+ D+G Y+ + +T
Sbjct: 66 NLTRDDSGTYNVTVYST 82
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 35.6 bits (81), Expect = 0.001
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 276 SVGRLKQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG 335
+ L G+ + L C V+ A A + + R +
Sbjct: 8 ELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR------GEKELKREPAVGEPAEVT 61
Query: 336 LVIMAVEELDAGKYDC 351
++ + ++ C
Sbjct: 62 TTVLVRRDHHGAQFSC 77
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 35.3 bits (80), Expect = 0.002
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
TV+ GQ V L+C +P + + + + G L + +V
Sbjct: 6 LTVSQGQPVKLNC----SVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSV 61
Query: 342 EELDAGKYDCWLGNTV 357
E DAG+Y C + +
Sbjct: 62 ERSDAGRYWCQVEDGG 77
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 34.7 bits (79), Expect = 0.002
Identities = 20/87 (22%), Positives = 25/87 (28%), Gaps = 14/87 (16%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V GQ V + C V P +S + D GLVI V
Sbjct: 13 IVVKQGQDVTIPCKVT------GLPAPNVVWSHNAKPLS-----GGRATVTDSGLVIKGV 61
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTV 365
+ D G Y C N + V
Sbjct: 62 KNGDKGYYGCRATNEHGDKYFETLVQV 88
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 34.4 bits (78), Expect = 0.003
Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 9/87 (10%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
TV G+S SC +P+ + + R I +V
Sbjct: 9 MTVYEGESARFSCDTD------GEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSV 62
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTV 365
+ D G Y + N LT+
Sbjct: 63 QASDEGNYSVVVENSEGKQEAEFTLTI 89
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 34.5 bits (78), Expect = 0.003
Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 8/89 (8%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V G + C V+ + K+ +QI + + V
Sbjct: 18 MEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTI-----SEV 72
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367
D KY C N CT L V+
Sbjct: 73 CGDDDAKYTCKAVNSLGEATCTAELLVET 101
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 34.5 bits (78), Expect = 0.004
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 7/89 (7%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
T GQSV L C A +P + + + + L I V
Sbjct: 15 ATANLGQSVTLVC----DADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNV 70
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367
++ D +Y C N + +L V A
Sbjct: 71 DKNDEAEYVCIAENKAGEQDASIHLKVFA 99
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 34.2 bits (77), Expect = 0.005
Identities = 21/99 (21%), Positives = 29/99 (29%), Gaps = 20/99 (20%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDK---------GRYQIKFRSDKFIRTV 332
+ G V C V ++ + G +K + T
Sbjct: 15 ASTVVGGDVEFVCKVY-----SDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKAAGVNTT 69
Query: 333 DGG---LVIMAVEELDAGKYDCWLGN---TVLCTHNLTV 365
D L I V DAG+Y C GN + LTV
Sbjct: 70 DKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTV 108
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 34.2 bits (77), Expect = 0.005
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHY----SKDKGRYQIKFRSDKFIRTVDGGL- 336
+ T G L+C + + + F + ++ G
Sbjct: 12 SSATIGNRAVLTCSE---QDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGEL 68
Query: 337 VIMAVEELDAGKYDCWLGN---TVLCTHNLTVDA 367
V + D G+Y C N T + ++ + ++A
Sbjct: 69 VFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 102
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 34.2 bits (77), Expect = 0.006
Identities = 16/105 (15%), Positives = 29/105 (27%), Gaps = 20/105 (19%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI--------------KFRSDKF 328
G L C + + + WY + + + R++
Sbjct: 13 RALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELL 72
Query: 329 IRTVDGG---LVIMAVEELDAGKYDCWLGNTVL---CTHNLTVDA 367
++ G L I V D G Y C+ + L V+
Sbjct: 73 KESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 117
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 33.7 bits (76), Expect = 0.006
Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 7/84 (8%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V+ G + L+ + + + +Y + K L I
Sbjct: 16 YQVSKGHKIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRT------LTISQC 69
Query: 342 EELDAGKYDCWLGNTVLCTHNLTV 365
D Y C +G C+ L V
Sbjct: 70 SLADDAAYQCVVGGEK-CSTELFV 92
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 33.7 bits (76), Expect = 0.009
Identities = 11/85 (12%), Positives = 25/85 (29%), Gaps = 13/85 (15%)
Query: 280 LKQTVTWGQSVHLSCFVKLPASMANQPMSWY--------HYSKDKGRYQIKFRSDKFIRT 331
LK + ++ L C + + + + G+ + K++
Sbjct: 2 LKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGR 61
Query: 332 V-----DGGLVIMAVEELDAGKYDC 351
L + ++ D G Y C
Sbjct: 62 TSFDSDSWTLRLHNLQIKDKGLYQC 86
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 33.3 bits (75), Expect = 0.009
Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 9/78 (11%)
Query: 283 TVTWGQSVHLSCFVKLPASMA------NQPMSWYHYSKDKGRYQIKFR---SDKFIRTVD 333
T + LSC + Q + G I F T +
Sbjct: 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNN 64
Query: 334 GGLVIMAVEELDAGKYDC 351
+VI+A+ D G Y+C
Sbjct: 65 LSIVILALRPSDEGTYEC 82
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 33.5 bits (75), Expect = 0.009
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 9/91 (9%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG---LVI 338
+ + G++ L C + + +WY + + + + +F + G L I
Sbjct: 12 EHINEGETAMLVCKSE--SVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHI 69
Query: 339 MAVEELD-AGKYDCWLGN---TVLCTHNLTV 365
+ G+Y C + + L V
Sbjct: 70 ENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 32.9 bits (74), Expect = 0.012
Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 15/89 (16%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
GQ V L CF P+ + K G K+ S + L I V
Sbjct: 15 TYALTGQMVTLECFAF------GNPVPQIKWRKLDGSQTSKWLSS------EPLLHIQNV 62
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367
+ D G Y+C N + + A
Sbjct: 63 DFEDEGTYECEAENIKGRDTYQGRIIIHA 91
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 32.5 bits (73), Expect = 0.013
Identities = 21/89 (23%), Positives = 27/89 (30%), Gaps = 13/89 (14%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
G + SC AS +P + S I G L +
Sbjct: 11 TEADIGSDLRWSC----VASGKPRPAVRWLR------DGQPLASQNRIEVSGGELRFSKL 60
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTVDA 367
D+G Y C N TV + LTV A
Sbjct: 61 VLEDSGMYQCVAENKHGTVYASAELTVQA 89
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 32.5 bits (73), Expect = 0.015
Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 10/90 (11%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA- 340
QTV G H V +P + K+ + + R + + +++
Sbjct: 14 QTVGQGSDAHFRVRVV------GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRD 67
Query: 341 VEELDAGKYDCWLGN---TVLCTHNLTVDA 367
V D+ N L V A
Sbjct: 68 VTGEDSASIMVKAINIAGETSSHAFLLVQA 97
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 31.4 bits (70), Expect = 0.033
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 10/87 (11%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
Q G+ + C V + + GR I + +FI + L I +
Sbjct: 11 QEFKEGEDAVIVCDVV------SSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGI 63
Query: 342 EELDAGKYDCWLGNTV---LCTHNLTV 365
++ D G Y C + ++ V
Sbjct: 64 KKTDEGTYRCEGRILARGEINFKDIQV 90
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 31.5 bits (70), Expect = 0.044
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
+T G V +C + P Y + ++ I +F+ G L I
Sbjct: 14 VKITEGWGVMFTCSP-----PPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKT 68
Query: 342 EELDAGKYDCWLGNTV 357
E D G Y C+ + +
Sbjct: 69 EASDLGNYSCFATSHI 84
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 31.5 bits (70), Expect = 0.047
Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 282 QTVTWGQSVHLSCFVKL---PASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVI 338
+VT G L+C P+ + + D + + S I G L+
Sbjct: 12 SSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIF 71
Query: 339 MAVEELDAGKYDCWLGNTV 357
V D+G+Y C N
Sbjct: 72 DPVTAFDSGEYYCQAQNGY 90
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 30.3 bits (67), Expect = 0.084
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 4/87 (4%)
Query: 283 TVTWGQSVHLSCFV--KLPASMANQPMSWYHYSKDKGRYQIKFRSDKF-IRTVDGGLVIM 339
+V L + + ++ ++ + TV G L I
Sbjct: 6 YGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIY 65
Query: 340 AVEELDAGKYDCWLGNTVLCTH-NLTV 365
+ D +Y+ N L V
Sbjct: 66 NLTSSDEDEYEMESPNITDTMKFFLYV 92
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 30.8 bits (68), Expect = 0.10
Identities = 9/109 (8%), Positives = 20/109 (18%), Gaps = 26/109 (23%)
Query: 283 TVTWGQSVHLSCFVK--------------------LPASMANQPMSWYHYSKDKGRYQIK 322
V G + L + + + + +
Sbjct: 20 VVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC 79
Query: 323 FRSDKFIRTVDGG---LVIMAVEELDAGKYDCWLGN---TVLCTHNLTV 365
+ + E+ D G Y + N + V
Sbjct: 80 ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 128
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 30.1 bits (67), Expect = 0.11
Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 7/89 (7%)
Query: 274 ESSVGRLKQTVT------WGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDK 327
+ +G+ TV +S+ + S+ K + R
Sbjct: 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSL 61
Query: 328 FIRTVDGGLVIMAVEELDAGKYDCWLGNT 356
+ + + L+I ++ D+ Y C + +
Sbjct: 62 WDQG-NFPLIIKNLKIEDSDTYICEVEDQ 89
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 29.4 bits (65), Expect = 0.17
Identities = 10/84 (11%), Positives = 20/84 (23%), Gaps = 8/84 (9%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V G++ H + P + + + L++
Sbjct: 11 VEVFVGETAHFEIELSEP-----DVHGQWKLKGQPLTASPDCEIIEDGKKH--ILILHNC 63
Query: 342 EELDAGKYDCWLGNTVLCTHNLTV 365
+ G+ N NL V
Sbjct: 64 QLGMTGEVSFQAANAK-SAANLKV 86
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 29.6 bits (65), Expect = 0.20
Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V G+S + C V + + + + ++ Y+ ++ + A
Sbjct: 12 TLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNE-TLHYETFGKAAPAPQEATATFNSTAD 70
Query: 342 EELDAGKYDC 351
E + C
Sbjct: 71 REDGHRNFSC 80
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 29.2 bits (64), Expect = 0.21
Identities = 16/89 (17%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 282 QTVTWGQSVHLSCFVK-LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA 340
V GQ C + + + S +FI + ++
Sbjct: 11 VEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIAS----FNVVN 66
Query: 341 VEELDAGKYDCW----LGNTVLCTHNLTV 365
+ DAGKY C G + L V
Sbjct: 67 TTKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 29.2 bits (64), Expect = 0.22
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
L C + + K G+ + +R +G LV +
Sbjct: 12 VLFRENNPTVLEC------IIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRP 65
Query: 342 EELDAGKYDCWLGNTV 357
+ D G Y C+
Sbjct: 66 QASDEGHYQCFAETPA 81
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 29.5 bits (65), Expect = 0.24
Identities = 11/94 (11%), Positives = 22/94 (23%), Gaps = 13/94 (13%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG-------RYQIKFRSDKFIRTVDG 334
+ +H C +P S+ QP + + + G
Sbjct: 7 VQLHTAVEMHHWC---IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 335 GLVIMAVEELDAGKYDCWLGN---TVLCTHNLTV 365
L + ++ G Y N +
Sbjct: 64 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 97
>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 29.3 bits (65), Expect = 0.25
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
GQ+V LSC ++ + M WY +G
Sbjct: 9 LFRKEGQNVTLSCE----QNLNHDAMYWYRQDPGQGLRL 43
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 28.8 bits (63), Expect = 0.30
Identities = 20/87 (22%), Positives = 26/87 (29%), Gaps = 13/87 (14%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
Q+V G V C + P +++ D G L I V
Sbjct: 12 QSVRPGADVTFICTA-----KSKSPAYTLVWTRLHNGKLPSRAMDFN-----GILTIRNV 61
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTV 365
+ DAG Y C N T L V
Sbjct: 62 QPSDAGTYVCTGSNMFAMDQGTATLHV 88
>d1dqta_ b.1.1.1 (A:) Immunoreceptor CTLA-4 (CD152), N-terminal
fragment {Mouse (Mus musculus) [TaxId: 10090]}
Length = 117
Score = 28.9 bits (64), Expect = 0.38
Identities = 4/58 (6%), Positives = 12/58 (20%), Gaps = 10/58 (17%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG----------RYQIKFRSDKFIR 330
+ C + ++ + D+ + + F F
Sbjct: 10 LASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPFCS 67
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 29.0 bits (64), Expect = 0.46
Identities = 16/91 (17%), Positives = 24/91 (26%), Gaps = 20/91 (21%)
Query: 283 TVTWGQSVHLSCFVKLPAS---------------MANQPMSWYHYSKDKGRYQIKFRSDK 327
TV G VH+ C P + + + + D+
Sbjct: 12 TVQEGMCVHVRCSFSYPVDSQTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDR 71
Query: 328 FIRTVDGG-----LVIMAVEELDAGKYDCWL 353
F D L I DAG+Y +
Sbjct: 72 FHLLGDPQTKNCTLSIRDARMSDAGRYFFRM 102
>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 110
Score = 27.9 bits (61), Expect = 0.81
Identities = 6/28 (21%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWY 310
G++ +L C N+ + WY
Sbjct: 9 DCAEGRAANLPC--NHSTISGNEYVYWY 34
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 27.7 bits (61), Expect = 0.86
Identities = 16/75 (21%), Positives = 22/75 (29%), Gaps = 8/75 (10%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG-RYQIKFRSDKFIRTVDGGLVIMA 340
+ SV + C A K Y+ R KF D VI
Sbjct: 16 PVIPLDGSVKIQCQAIREA-------YLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDH 68
Query: 341 VEELDAGKYDCWLGN 355
++ AG+Y C
Sbjct: 69 MDANKAGRYQCQYRI 83
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo sapiens),
delta-chain [TaxId: 9606]}
Length = 116
Score = 27.6 bits (60), Expect = 1.3
Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYS 313
QTV G V L C +N + WY
Sbjct: 10 QTVASGSEVVLLC--TYDTVYSNPDLFWYRIR 39
>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human
(Homo sapiens) [TaxId: 9606]}
Length = 116
Score = 27.5 bits (60), Expect = 1.4
Identities = 12/82 (14%), Positives = 23/82 (28%), Gaps = 13/82 (15%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG------- 335
G SV ++C+ + + W G + G
Sbjct: 10 NSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFP 69
Query: 336 ------LVIMAVEELDAGKYDC 351
+ I + + D+G+Y C
Sbjct: 70 ENGTFVVNIAQLSQDDSGRYKC 91
>d1hxmb1 b.1.1.1 (B:1-123) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 123
Score = 27.5 bits (60), Expect = 1.5
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Query: 278 GRLKQ-----TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS 325
G L+Q T T ++ L C V +++ + WY + + S
Sbjct: 2 GHLEQPQISSTKTLSKTARLECVVS-GITISATSVYWYRERPGEVIQFLVSIS 53
>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 27.1 bits (59), Expect = 1.5
Identities = 6/39 (15%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS 325
GQ++ + C P + W + ++ S
Sbjct: 11 GQTLTVRCQYP-PTGSLYEKKGWCKEASALVCIRLVTSS 48
>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus musculus),
alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.7 bits (58), Expect = 2.0
Identities = 5/39 (12%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI 321
+V +V + C ++ + WY + +
Sbjct: 10 SVMEKTTVTMDC--VYETQDSSYFLFWYKQTASGEIVFL 46
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 26.4 bits (57), Expect = 2.3
Identities = 16/90 (17%), Positives = 24/90 (26%), Gaps = 12/90 (13%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG--LVIM 339
G + C + PM + +Y K+ G L+
Sbjct: 13 MMAKAGDVTMIYCMYG------SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFK 66
Query: 340 AVEELDAGKYDCW----LGNTVLCTHNLTV 365
D G Y C +G + LTV
Sbjct: 67 TTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 96
>d1ugna1 b.1.1.4 (A:2-97) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 26.4 bits (58), Expect = 2.3
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 10/72 (13%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG-RYQIKFRSDKFIRTVDGGLVIMA 340
+T G V L C Y ++K I + ++ I +
Sbjct: 13 SVITQGSPVTLRCQGGQET-------QEYRLYREKKTAPWITRIPQELVKKGQ--FPIPS 63
Query: 341 VEELDAGKYDCW 352
+ G+Y C+
Sbjct: 64 ITWEHTGRYRCY 75
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 26.1 bits (56), Expect = 2.4
Identities = 15/85 (17%), Positives = 23/85 (27%), Gaps = 16/85 (18%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
V SV L+C + + + +
Sbjct: 14 INVLQEDSVTLTCRG-----THSPESDSIQWFHNGNLIPTHTQPSY----------RFKA 58
Query: 342 EELDAGKYDCWLGNTVLC-THNLTV 365
D+G+Y C G T L +LTV
Sbjct: 59 NNNDSGEYTCQTGQTSLSDPVHLTV 83
>d1i8lc_ b.1.1.1 (C:) Immunoreceptor CTLA-4 (CD152), N-terminal
fragment {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 26.6 bits (58), Expect = 2.5
Identities = 4/57 (7%), Positives = 11/57 (19%), Gaps = 10/57 (17%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR----------YQIKFRSDKFI 329
+ C P ++ + + ++ F D
Sbjct: 10 LASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSIC 66
>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 26.7 bits (58), Expect = 2.6
Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRS 325
+ GQ++ + C L A+ +W + +
Sbjct: 10 ELKEGQTLDVKCDYTLE-KFASSQKAWQIIRDGEMPKTLACTE 51
>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 96
Score = 26.3 bits (57), Expect = 2.7
Identities = 5/38 (13%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQ 320
++ G++ ++C + + WY + +G
Sbjct: 4 SIQEGENATMNCSY----KTSINNLQWYRQNSGRGLVH 37
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 26.6 bits (57), Expect = 2.7
Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 5/89 (5%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYS-KDKGRYQIKFRSDKFIRTVDGGLVIMA 340
Q G+ + CF++ SW + + + V L I
Sbjct: 16 QHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISN 75
Query: 341 V-EELDAGKYDCWLGN---TVLCTHNLTV 365
+ Y+C N + L
Sbjct: 76 IVRADFQTIYNCTAWNSFGSDTEIIRLKE 104
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 26.2 bits (56), Expect = 3.4
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 283 TVTWGQSVHLSCFVK--LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA 340
V +S+ L+C + + + + QI + G+ +
Sbjct: 12 QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSS 71
Query: 341 VEELDAGKYDCWLGNTV 357
V D G+Y C +
Sbjct: 72 VTRKDNGEYTCMVSEEG 88
>d2aega1 d.303.1.1 (A:2-244) Hypothetical protein Atu5096
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 243
Score = 27.1 bits (59), Expect = 3.6
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 11/83 (13%)
Query: 294 CFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV---EELDAGKYD 350
C V P + S+ + + F R L+ A + + +
Sbjct: 117 CLV--PVT------SFAEPDPASKQEGGNVPNAWFARDEAKSLMFFAGIHVPQWKSVRKV 168
Query: 351 CWLGNTVLCTHNLTVDAHSNVAD 373
T LT D + V
Sbjct: 169 RDGLTTDDLYGFLTTDPNDLVKP 191
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 25.7 bits (55), Expect = 3.7
Identities = 8/87 (9%), Positives = 22/87 (25%), Gaps = 9/87 (10%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
+ G + +L P ++ + ++ + +
Sbjct: 12 IKIKAGFTHNLEVDFI------GAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSA 65
Query: 342 EELDAGKYDCWLGN---TVLCTHNLTV 365
+ D+G Y + N + V
Sbjct: 66 KRADSGNYKLKVKNELGEDEAIFEVIV 92
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 25.9 bits (55), Expect = 3.7
Identities = 11/88 (12%), Positives = 23/88 (26%), Gaps = 5/88 (5%)
Query: 283 TVTWGQSVHLSCFVK--LPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA 340
+ V LSC + + +I + + + G+ +
Sbjct: 15 RIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKS 74
Query: 341 VEELDAGKYDCWLGN---TVLCTHNLTV 365
V D G Y C + + +
Sbjct: 75 VTREDTGTYTCMVSEEGGNSYGEVKVKL 102
>d1ogad1 b.1.1.1 (D:3-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 26.0 bits (56), Expect = 3.9
Identities = 5/30 (16%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHY 312
++ G+++ + C +S + WY
Sbjct: 11 SIQEGENLTVYCN----SSSVFSSLQWYRQ 36
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 25.4 bits (54), Expect = 3.9
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 15/76 (19%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
+ G++V L+C +++ + L I+
Sbjct: 11 NRIFKGENVTLTCNGNNFFEVSSTKWFHNG---------------SLSEETNSSLNIVNA 55
Query: 342 EELDAGKYDCWLGNTV 357
+ D+G+Y C
Sbjct: 56 KFEDSGEYKCQHQQVN 71
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 25.8 bits (56), Expect = 4.2
Identities = 10/72 (13%), Positives = 16/72 (22%), Gaps = 9/72 (12%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGR--YQIKFRSDKFIRTVDGGLVIM 339
V G +V L C + + K+ Q + +
Sbjct: 13 PVVNSGGNVTLQC-------DSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVG 65
Query: 340 AVEELDAGKYDC 351
V Y C
Sbjct: 66 PVSPSRRWWYRC 77
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 26.0 bits (56), Expect = 4.2
Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 20/89 (22%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQ--------------------PMSWYHYSKDKGRYQIK 322
G V L C +++ Y + G ++ +
Sbjct: 10 YGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKER 69
Query: 323 FRSDKFIRTVDGGLVIMAVEELDAGKYDC 351
+ DG +VI ++ D G + C
Sbjct: 70 IQWVGDPSWKDGSIVIHNLDYSDNGTFTC 98
>d1w2ya_ a.204.1.1 (A:) Type II deoxyuridine triphosphatase
{Campylobacter jejuni [TaxId: 197]}
Length = 229
Score = 26.6 bits (58), Expect = 4.3
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 102 GEFPFYFNEIQDIYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGK 155
G+ N+I+ I G ++ L C ++E + + ++GK
Sbjct: 124 GDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLA--IKCGLNLEILYKTYIGK 175
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 26.0 bits (56), Expect = 4.3
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYSKDK 316
GQ V LSC ++ +SWY + +
Sbjct: 14 GQQVTLSCS----PISGHRSVSWYQQTPGQ 39
>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Engineered (including hybrid species)}
Length = 106
Score = 25.8 bits (56), Expect = 4.5
Identities = 5/35 (14%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKG 317
+ + G ++ ++C ++WY K
Sbjct: 11 SASVGDTITITCRAS---QSIETWLAWYQQKPGKA 42
>d1oaql_ b.1.1.1 (L:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 110
Score = 25.5 bits (55), Expect = 5.1
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHY 312
T + G++V L+C A + +W
Sbjct: 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQE 40
>d2esve1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 111
Score = 25.5 bits (55), Expect = 5.1
Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 4/53 (7%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDG 334
+ GQ+V L C + + WY K + + + G
Sbjct: 9 SVIEKGQTVTLRCD----PISGHDNLYWYRRVMGKEIKFLLHFVKESKQDESG 57
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 25.4 bits (54), Expect = 5.6
Identities = 14/79 (17%), Positives = 23/79 (29%), Gaps = 6/79 (7%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGL---VI 338
++ G L C VK AN+P + +++ R + +
Sbjct: 13 HSILAGDPFELECPVK---YCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHF 69
Query: 339 MAVEELDAGKYDCWLGNTV 357
V D G Y C
Sbjct: 70 EPVLPNDNGSYRCSANFQS 88
>d3d85d1 b.1.1.4 (D:1-87) The p40 domain of interleukin-12 (IL-12
beta chain), N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 87
Score = 25.2 bits (55), Expect = 5.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 336 LVIMAVEELDAGKYDCWLGNTVL 358
L I E DAG+Y C G VL
Sbjct: 53 LTIQVKEFGDAGQYTCHKGGEVL 75
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 25.4 bits (54), Expect = 5.8
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 281 KQTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMA 340
+ ++ G+S C V ++ +SW+ + +K + S + L I
Sbjct: 9 QGEISVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYN 66
Query: 341 VEELDAGKYDCW----LGNTVLCTHNLTV 365
DAG Y C G T N+ +
Sbjct: 67 ANIDDAGIYKCVVTAEDGTQSEATVNVKI 95
>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 25.6 bits (55), Expect = 5.8
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQI 321
+T G++V L C ++ S SW +
Sbjct: 10 RTWNLGETVELKC--QVLLSNPTSGCSWLFQPRGAAASPT 47
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 25.5 bits (55), Expect = 6.0
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGG-----LV 337
T G+S+ ++C ++ AS A WY +G + + +++ TV+ G L
Sbjct: 10 TKETGESLTINCVLR-DASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLR 68
Query: 338 IMAVEELDAGKYDCWLG 354
I + D G Y C LG
Sbjct: 69 INDLTVEDGGTYRCGLG 85
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 114
Score = 25.6 bits (55), Expect = 6.4
Identities = 6/37 (16%), Positives = 9/37 (24%), Gaps = 2/37 (5%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRY 319
+V + V L C + WY
Sbjct: 11 SVVEKEDVTLDC--VYETRDTTYYLFWYKQPPSGELV 45
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32) {Human
(Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 24.9 bits (53), Expect = 6.6
Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 15/76 (19%)
Query: 282 QTVTWGQSVHLSCFVKLPASMANQPMSWYHYSKDKGRYQIKFRSDKFIRTVDGGLVIMAV 341
+V SV L C I ++ + I A
Sbjct: 15 YSVLEKDSVTLKC-------QGAYSPEDNSTQWFHNESLISSQASSYF--------IDAA 59
Query: 342 EELDAGKYDCWLGNTV 357
D+G+Y C +
Sbjct: 60 TVNDSGEYRCQTNLST 75
>d1xoua_ a.231.1.1 (A:) Secreted protein EspA {Escherichia coli
[TaxId: 562]}
Length = 160
Score = 25.6 bits (56), Expect = 6.7
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 184 NDTETLPDSVLNFIRSH 200
N LPD V+++I
Sbjct: 68 NAKAQLPDEVISYINDP 84
>d1q9ra1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 1.2
[TaxId: 10090]}
Length = 113
Score = 25.4 bits (55), Expect = 6.7
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 283 TVTWGQSVHLSC---FVKLPASMANQPMSWYHYSKDKG 317
V+ G+ V +SC L + ++WY +
Sbjct: 12 AVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQS 49
>d1mjul1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 1.1
[TaxId: 10090]}
Length = 112
Score = 25.0 bits (54), Expect = 7.4
Identities = 21/87 (24%), Positives = 26/87 (29%), Gaps = 13/87 (14%)
Query: 283 TVTWGQSVHLSCFV--KLPASMANQPMSWYH-----------YSKDKGRYQIKFRSDKFI 329
VT G+SV +SC L S N + W+ Y + R
Sbjct: 12 PVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSG 71
Query: 330 RTVDGGLVIMAVEELDAGKYDCWLGNT 356
L I VE D G Y C
Sbjct: 72 SGTAFTLRISRVEAEDVGVYYCLQHLE 98
>d1j8he1 b.1.1.1 (E:2-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 25.2 bits (54), Expect = 7.4
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 4/27 (14%)
Query: 287 GQSVHLSCFVKLPASMANQPMSWYHYS 313
G+ V L C M ++ M WY
Sbjct: 15 GEKVFLECV----QDMDHENMFWYRQD 37
>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 112
Score = 25.2 bits (54), Expect = 8.1
Identities = 6/28 (21%), Positives = 8/28 (28%), Gaps = 2/28 (7%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWY 310
+ VHL C + WY
Sbjct: 9 ESNEEEPVHLPC--NHSTISGTDYIHWY 34
>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 4 [TaxId: 9606]}
Length = 112
Score = 25.1 bits (54), Expect = 9.0
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHY 312
+ + GQS+ +SC + +SWY
Sbjct: 11 SGSPGQSITVSCTGVSSIVGSYNLVSWYQQ 40
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
{Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Length = 361
Score = 25.8 bits (55), Expect = 9.1
Identities = 20/194 (10%), Positives = 42/194 (21%), Gaps = 17/194 (8%)
Query: 179 PGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQY--EVF 236
G LP VL +D + +R ++ + + +
Sbjct: 9 AGPAA-----LPLEVLERA-QAEFVDYQHTGMSIMEMSHR-GAVYEAVHNEAQARLLALL 61
Query: 237 GTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLSCFV 296
G + Y V F + T++ + S
Sbjct: 62 GNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAAS 121
Query: 297 KLPASMANQPMSWYHYSKDK--------GRYQIKFRSDKFIRTVDGGLVIMAVEELDAGK 348
++ P +D + F T L+ ++ +
Sbjct: 122 SEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRP 181
Query: 349 YDCWLGNTVLCTHN 362
+D V
Sbjct: 182 FDLNQFGLVYAGAQ 195
>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 25.8 bits (55), Expect = 9.2
Identities = 3/52 (5%), Positives = 15/52 (28%), Gaps = 2/52 (3%)
Query: 203 MDEAVAHRDNKPVFYRRDLLFTHLVVDVVQY--EVFGTTSEYIVYFAATTTL 252
+ + + ++ ++ + VF T + + + +
Sbjct: 30 LPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHC 81
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli
[TaxId: 562]}
Length = 346
Score = 25.9 bits (55), Expect = 9.6
Identities = 24/259 (9%), Positives = 66/259 (25%), Gaps = 7/259 (2%)
Query: 54 ETAVEYINCGKSVFSRVARVCKRDTGGKNILSQNWATYLKARLNCSIPGEFPFYFNEIQD 113
A++ IN + + D + A + + G + Q
Sbjct: 27 RQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIG--HLCSSSTQP 84
Query: 114 IYKVPGDDTKFYGVFTTSTTGLMGSAICSFSIEDIERAFVGKFKEQATSTSAWLPVLSSR 173
+ D+ + L + G + + ++
Sbjct: 85 ASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAII 144
Query: 174 VPEPRPGQCVNDTETLPDSVLNFIRSHPLMDEAVAHRDNKPVFYRRDLLFTHLVVDVVQY 233
+ + G+ + + ++ + + F +D V Y
Sbjct: 145 HDKQQYGEGLARSVQ-----DGLKAANANVVFFDGITAGEKDFSALIARLKKENIDFVYY 199
Query: 234 EVFGTTSEYIVYFAATTTLRTVFVKVRLLQDVSNTSDSICESSVGRLKQTVTWGQSVHLS 293
+ ++ A + L+T F+ + + S ++ + + + + Q
Sbjct: 200 GGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYDQDPANQ 259
Query: 294 CFVKLPASMANQPMSWYHY 312
V + P Y +
Sbjct: 260 GIVDALKADKKDPSGPYVW 278
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 24.8 bits (53), Expect = 9.6
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 283 TVTWGQSVHLSCFVKLPASMANQPMSWYHY 312
+V+ G V L C S + WY
Sbjct: 11 SVSEGALVLLRCNYS---SSVPPYLFWYVQ 37
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.136 0.418
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,407,595
Number of extensions: 65544
Number of successful extensions: 369
Number of sequences better than 10.0: 1
Number of HSP's gapped: 328
Number of HSP's successfully gapped: 103
Length of query: 378
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 291
Effective length of database: 1,213,086
Effective search space: 353008026
Effective search space used: 353008026
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (25.1 bits)