Query psy10778
Match_columns 556
No_of_seqs 601 out of 3587
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 18:16:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10778.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10778hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t77_A Lipopolysaccharide-resp 100.0 1.7E-80 5.8E-85 623.1 12.5 197 6-203 217-414 (414)
2 2ynn_A Coatomer subunit beta'; 100.0 3.1E-34 1.1E-38 288.1 32.5 236 295-551 27-267 (304)
3 1vyh_C Platelet-activating fac 100.0 6.5E-34 2.2E-38 298.3 33.8 234 295-551 122-377 (410)
4 3ow8_A WD repeat-containing pr 100.0 1.6E-33 5.5E-38 285.5 31.5 225 295-542 94-320 (321)
5 4gqb_B Methylosome protein 50; 100.0 1.1E-33 3.6E-38 289.8 30.5 233 293-546 93-334 (344)
6 3ow8_A WD repeat-containing pr 100.0 2.5E-33 8.5E-38 284.2 28.6 235 295-551 50-287 (321)
7 1got_B GT-beta; complex (GTP-b 100.0 2.9E-32 9.9E-37 278.2 34.7 223 294-540 110-340 (340)
8 1vyh_C Platelet-activating fac 100.0 9E-33 3.1E-37 289.7 29.0 225 295-542 164-410 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 8.9E-32 3.1E-36 274.6 34.7 238 295-551 69-309 (340)
10 4g56_B MGC81050 protein; prote 100.0 2.4E-32 8.1E-37 281.2 29.1 233 295-548 107-348 (357)
11 2pbi_B Guanine nucleotide-bind 100.0 5.5E-31 1.9E-35 270.5 36.2 223 295-540 120-354 (354)
12 4ery_A WD repeat-containing pr 100.0 7.7E-31 2.6E-35 263.5 33.3 234 295-551 37-276 (312)
13 3frx_A Guanine nucleotide-bind 100.0 4.4E-31 1.5E-35 267.1 31.2 226 295-544 79-318 (319)
14 4gqb_B Methylosome protein 50; 100.0 1.5E-31 5.2E-36 273.8 27.2 207 322-546 80-292 (344)
15 2pbi_B Guanine nucleotide-bind 100.0 1.3E-30 4.6E-35 267.6 34.4 241 295-551 78-323 (354)
16 2hes_X YDR267CP; beta-propelle 100.0 6.7E-31 2.3E-35 267.1 30.6 235 295-544 26-281 (330)
17 1erj_A Transcriptional repress 100.0 3.3E-30 1.1E-34 268.4 35.1 226 294-543 136-389 (393)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-30 5E-35 266.2 31.2 231 295-544 30-284 (345)
19 2pm7_B Protein transport prote 100.0 6.2E-30 2.1E-34 255.9 34.7 232 295-543 23-285 (297)
20 3frx_A Guanine nucleotide-bind 100.0 2.3E-30 7.9E-35 261.8 31.8 225 295-545 32-269 (319)
21 2ynn_A Coatomer subunit beta'; 100.0 5.4E-30 1.9E-34 257.2 33.4 227 295-543 69-302 (304)
22 3iz6_a 40S ribosomal protein R 100.0 1.4E-30 4.8E-35 270.0 29.7 232 294-546 121-378 (380)
23 2hes_X YDR267CP; beta-propelle 100.0 2.6E-30 8.7E-35 262.8 30.2 230 295-543 72-328 (330)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 7E-30 2.4E-34 261.2 33.5 238 294-550 74-342 (345)
25 1erj_A Transcriptional repress 100.0 4.4E-30 1.5E-34 267.5 32.3 233 295-551 78-349 (393)
26 1nr0_A Actin interacting prote 100.0 8.2E-30 2.8E-34 281.0 33.7 228 295-546 73-358 (611)
27 2xzm_R RACK1; ribosome, transl 100.0 1.1E-29 3.8E-34 259.3 32.3 228 295-548 41-290 (343)
28 3iz6_a 40S ribosomal protein R 100.0 9.8E-31 3.4E-35 271.2 24.7 241 295-550 80-336 (380)
29 4aow_A Guanine nucleotide-bind 100.0 1.4E-29 4.7E-34 256.1 31.4 238 295-546 53-340 (340)
30 2ymu_A WD-40 repeat protein; u 100.0 1.7E-29 5.8E-34 275.1 34.2 220 294-540 357-577 (577)
31 1gxr_A ESG1, transducin-like e 100.0 4.5E-29 1.6E-33 251.4 34.1 231 295-547 65-300 (337)
32 4g56_B MGC81050 protein; prote 100.0 3.5E-30 1.2E-34 265.0 26.0 236 295-548 56-306 (357)
33 4gga_A P55CDC, cell division c 100.0 2.4E-29 8.4E-34 264.0 32.9 235 290-544 113-396 (420)
34 1gxr_A ESG1, transducin-like e 100.0 1.3E-28 4.5E-33 248.0 36.9 223 294-541 110-335 (337)
35 2xzm_R RACK1; ribosome, transl 100.0 9.7E-30 3.3E-34 259.7 28.3 228 295-544 90-341 (343)
36 3vl1_A 26S proteasome regulato 100.0 1.1E-29 3.6E-34 265.4 29.2 229 294-544 110-366 (420)
37 4ery_A WD repeat-containing pr 100.0 4.3E-29 1.5E-33 250.8 32.5 228 294-542 78-311 (312)
38 4ggc_A P55CDC, cell division c 100.0 4.6E-29 1.6E-33 249.7 32.2 244 290-544 33-316 (318)
39 1nr0_A Actin interacting prote 100.0 2.6E-29 8.9E-34 277.0 31.5 233 295-550 32-277 (611)
40 3f3f_A Nucleoporin SEH1; struc 100.0 4.4E-29 1.5E-33 251.5 30.4 248 295-553 25-347 (351)
41 4aez_A CDC20, WD repeat-contai 100.0 8.4E-29 2.9E-33 258.2 33.4 235 295-550 148-387 (401)
42 3vl1_A 26S proteasome regulato 100.0 8.8E-30 3E-34 266.0 25.8 231 295-546 70-325 (420)
43 3zwl_B Eukaryotic translation 100.0 5.1E-28 1.7E-32 246.7 37.6 238 294-546 87-349 (369)
44 1sq9_A Antiviral protein SKI8; 100.0 3E-29 1E-33 259.6 27.9 238 295-551 28-330 (397)
45 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-28 5.2E-33 256.1 33.3 237 295-546 49-302 (402)
46 2ymu_A WD-40 repeat protein; u 100.0 2.2E-28 7.5E-33 266.4 34.9 230 294-551 316-546 (577)
47 3i2n_A WD repeat-containing pr 100.0 1.9E-28 6.3E-33 249.3 31.8 230 294-546 81-356 (357)
48 4h5i_A Guanine nucleotide-exch 100.0 7.8E-29 2.7E-33 255.7 28.7 230 295-543 96-343 (365)
49 3jrp_A Fusion protein of prote 100.0 1.6E-28 5.3E-33 251.7 30.5 230 295-544 25-288 (379)
50 3dwl_C Actin-related protein 2 100.0 5.1E-30 1.7E-34 264.0 19.5 229 295-543 25-281 (377)
51 2pm7_B Protein transport prote 100.0 2.5E-28 8.4E-33 244.2 30.8 207 321-544 6-239 (297)
52 3bg1_A Protein SEC13 homolog; 100.0 1.3E-29 4.4E-34 256.0 21.0 231 295-543 27-293 (316)
53 3k26_A Polycomb protein EED; W 100.0 8.6E-29 2.9E-33 252.4 27.0 227 294-543 86-366 (366)
54 3dm0_A Maltose-binding peripla 100.0 2.1E-28 7E-33 273.7 31.3 229 295-543 444-693 (694)
55 1k8k_C P40, ARP2/3 complex 41 100.0 5E-28 1.7E-32 247.8 31.4 227 295-543 22-274 (372)
56 3dm0_A Maltose-binding peripla 100.0 1.9E-28 6.4E-33 274.1 30.6 232 294-550 396-639 (694)
57 1sq9_A Antiviral protein SKI8; 100.0 1.3E-27 4.4E-32 247.4 34.1 235 294-544 82-396 (397)
58 1r5m_A SIR4-interacting protei 100.0 1.2E-27 4.2E-32 248.7 33.4 233 294-542 121-424 (425)
59 3i2n_A WD repeat-containing pr 100.0 7.4E-29 2.5E-33 252.2 23.4 232 295-546 33-294 (357)
60 4aez_A CDC20, WD repeat-contai 100.0 5.6E-28 1.9E-32 252.0 30.2 230 295-548 105-341 (401)
61 3ei3_B DNA damage-binding prot 100.0 2.2E-28 7.5E-33 252.7 27.0 232 295-551 88-347 (383)
62 2j04_B YDR362CP, TAU91; beta p 100.0 3.8E-29 1.3E-33 269.7 21.3 236 295-544 175-429 (524)
63 3v7d_B Cell division control p 100.0 1.1E-27 3.9E-32 253.8 31.6 225 295-547 134-385 (464)
64 4e54_B DNA damage-binding prot 100.0 4.3E-29 1.5E-33 263.5 20.0 231 295-546 134-433 (435)
65 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-27 5E-32 238.0 30.0 230 295-551 31-263 (313)
66 3gre_A Serine/threonine-protei 100.0 6.6E-28 2.3E-32 253.6 28.8 247 295-552 78-368 (437)
67 2pm9_A Protein WEB1, protein t 100.0 2E-28 6.9E-33 254.9 24.4 241 295-548 81-342 (416)
68 4aow_A Guanine nucleotide-bind 100.0 1.4E-27 4.9E-32 241.2 29.7 218 317-550 32-253 (340)
69 3mkq_A Coatomer beta'-subunit; 100.0 4.9E-28 1.7E-32 274.6 28.9 235 295-550 27-266 (814)
70 3ei3_B DNA damage-binding prot 100.0 1.2E-27 4.3E-32 247.0 29.1 223 294-543 132-382 (383)
71 2xyi_A Probable histone-bindin 100.0 1.6E-27 5.4E-32 251.2 30.3 235 294-543 142-410 (430)
72 2pm9_A Protein WEB1, protein t 100.0 1.9E-28 6.5E-33 255.1 22.5 241 295-551 27-302 (416)
73 4a11_B DNA excision repair pro 100.0 2.8E-27 9.7E-32 244.8 30.5 233 295-550 58-372 (408)
74 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-27 1.7E-31 240.4 31.9 233 295-545 66-363 (372)
75 3k26_A Polycomb protein EED; W 100.0 1.8E-28 6.2E-33 250.0 21.0 230 295-548 36-323 (366)
76 1yfq_A Cell cycle arrest prote 100.0 8.3E-28 2.9E-32 243.4 25.0 228 295-551 25-290 (342)
77 3dw8_B Serine/threonine-protei 100.0 8.3E-28 2.8E-32 252.9 24.8 237 295-547 42-377 (447)
78 3odt_A Protein DOA1; ubiquitin 100.0 6E-26 2.1E-30 226.3 36.9 225 294-549 72-302 (313)
79 3bg1_A Protein SEC13 homolog; 100.0 2.9E-28 1E-32 246.0 19.5 207 320-543 9-247 (316)
80 2j04_B YDR362CP, TAU91; beta p 100.0 5.2E-28 1.8E-32 260.9 22.4 228 294-544 226-518 (524)
81 3jrp_A Fusion protein of prote 100.0 8.3E-27 2.8E-31 238.8 30.0 208 317-545 5-242 (379)
82 3zwl_B Eukaryotic translation 100.0 1.2E-26 4.1E-31 236.5 30.9 232 295-551 46-312 (369)
83 1r5m_A SIR4-interacting protei 100.0 3.6E-27 1.2E-31 245.2 27.4 232 295-551 60-327 (425)
84 3v7d_B Cell division control p 100.0 7.2E-26 2.5E-30 240.0 36.5 234 295-548 175-426 (464)
85 4e54_B DNA damage-binding prot 100.0 6.6E-28 2.3E-32 254.4 20.1 210 322-548 117-332 (435)
86 3mmy_A MRNA export factor; mRN 100.0 3.2E-27 1.1E-31 240.6 22.9 227 295-543 56-346 (368)
87 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-26 1.2E-30 271.6 35.2 226 295-543 629-913 (1249)
88 1p22_A F-BOX/WD-repeat protein 100.0 1.6E-26 5.4E-31 243.6 28.5 218 295-545 145-367 (435)
89 3dwl_C Actin-related protein 2 100.0 4.7E-27 1.6E-31 241.8 22.9 227 295-541 69-377 (377)
90 1pgu_A Actin interacting prote 100.0 6.1E-26 2.1E-30 248.2 32.3 239 295-551 32-291 (615)
91 2aq5_A Coronin-1A; WD40 repeat 99.9 6.4E-27 2.2E-31 243.8 22.7 229 294-546 95-345 (402)
92 3jro_A Fusion protein of prote 99.9 5.7E-27 2E-31 264.5 23.8 230 295-545 23-287 (753)
93 3lrv_A PRE-mRNA-splicing facto 99.9 4.1E-27 1.4E-31 240.1 20.5 234 295-546 50-295 (343)
94 4gq1_A NUP37; propeller, trans 99.9 5.3E-27 1.8E-31 244.3 21.4 227 295-542 103-388 (393)
95 3dw8_B Serine/threonine-protei 99.9 3.5E-26 1.2E-30 240.4 26.4 232 295-542 109-445 (447)
96 1p22_A F-BOX/WD-repeat protein 99.9 3.5E-26 1.2E-30 241.0 26.0 223 295-547 185-418 (435)
97 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2E-25 6.9E-30 235.6 31.5 224 295-550 171-398 (445)
98 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.1E-25 7E-30 235.6 30.9 220 295-544 211-443 (445)
99 3f3f_A Nucleoporin SEH1; struc 99.9 1.1E-25 3.7E-30 226.6 27.5 209 319-545 6-251 (351)
100 4a11_B DNA excision repair pro 99.9 4.8E-26 1.6E-30 235.5 23.5 234 301-548 21-281 (408)
101 3gre_A Serine/threonine-protei 99.9 8.8E-26 3E-30 237.4 25.3 228 308-551 48-300 (437)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.7E-25 1.3E-29 234.3 29.0 197 323-541 101-337 (450)
103 3mmy_A MRNA export factor; mRN 99.9 1.7E-25 5.8E-30 227.8 24.8 213 322-551 37-312 (368)
104 3mkq_A Coatomer beta'-subunit; 99.9 7.6E-25 2.6E-29 248.3 32.4 230 295-545 69-304 (814)
105 1pgu_A Actin interacting prote 99.9 8.9E-25 3E-29 239.0 31.7 230 294-550 79-335 (615)
106 2w18_A PALB2, fancn, partner a 99.9 4.6E-25 1.6E-29 220.7 26.1 198 326-541 113-355 (356)
107 3sfz_A APAF-1, apoptotic pepti 99.9 8.3E-25 2.9E-29 259.7 31.6 239 295-547 715-1038(1249)
108 2j04_A TAU60, YPL007P, hypothe 99.9 1.2E-24 3.9E-29 231.1 27.7 261 243-542 11-296 (588)
109 1l0q_A Surface layer protein; 99.9 5.7E-24 1.9E-28 219.8 31.3 229 295-550 4-240 (391)
110 3jro_A Fusion protein of prote 99.9 8.3E-25 2.8E-29 246.8 26.7 205 321-545 6-240 (753)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.1E-24 1.1E-28 227.1 29.3 230 295-544 117-392 (450)
112 1yfq_A Cell cycle arrest prote 99.9 2.1E-24 7.3E-29 218.2 26.8 225 295-540 71-321 (342)
113 2xyi_A Probable histone-bindin 99.9 5.6E-25 1.9E-29 231.7 22.9 229 303-543 107-353 (430)
114 3bws_A Protein LP49; two-domai 99.9 1.9E-23 6.4E-28 219.0 32.6 240 294-551 135-398 (433)
115 2oaj_A Protein SNI1; WD40 repe 99.9 3.3E-24 1.1E-28 246.1 28.8 245 293-551 447-791 (902)
116 4h5i_A Guanine nucleotide-exch 99.9 1.2E-24 4.1E-29 224.3 22.4 240 295-550 28-307 (365)
117 1l0q_A Surface layer protein; 99.9 4.8E-23 1.7E-27 212.8 34.5 229 295-550 46-282 (391)
118 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-24 7.4E-29 247.6 26.8 202 321-547 14-246 (902)
119 3lrv_A PRE-mRNA-splicing facto 99.9 2.6E-24 8.7E-29 219.4 22.3 222 296-543 88-333 (343)
120 3vu4_A KMHSV2; beta-propeller 99.9 6.8E-23 2.3E-27 210.2 31.2 222 295-546 73-339 (355)
121 3vu4_A KMHSV2; beta-propeller 99.9 1.4E-23 4.8E-28 215.3 25.0 201 322-545 17-273 (355)
122 3bws_A Protein LP49; two-domai 99.9 1.6E-22 5.6E-27 211.8 30.5 224 295-543 183-432 (433)
123 4gq1_A NUP37; propeller, trans 99.9 9.2E-24 3.1E-28 219.8 17.7 208 328-551 93-356 (393)
124 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-22 4.9E-27 215.1 22.6 209 295-546 29-257 (588)
125 4gga_A P55CDC, cell division c 99.9 4.8E-21 1.6E-25 200.8 30.9 246 246-508 146-403 (420)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.9E-20 6.6E-25 196.3 28.6 216 303-545 159-389 (415)
127 2w18_A PALB2, fancn, partner a 99.9 1E-20 3.5E-25 189.3 23.2 180 295-498 147-355 (356)
128 4ggc_A P55CDC, cell division c 99.9 2.4E-19 8.3E-24 178.8 31.0 192 295-502 121-317 (318)
129 2ojh_A Uncharacterized protein 99.8 5.7E-20 2E-24 180.5 21.9 223 298-547 17-262 (297)
130 3u4y_A Uncharacterized protein 99.8 3.4E-19 1.2E-23 179.5 28.1 227 295-546 12-255 (331)
131 1pby_B Quinohemoprotein amine 99.8 3.1E-19 1.1E-23 179.4 25.3 229 295-551 3-318 (337)
132 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.1E-19 3.8E-24 190.4 22.5 229 295-546 77-347 (415)
133 1nir_A Nitrite reductase; hemo 99.8 1.3E-18 4.5E-23 188.5 28.5 226 295-543 151-402 (543)
134 1jmx_B Amine dehydrogenase; ox 99.8 7.3E-19 2.5E-23 177.8 22.6 227 295-550 13-332 (349)
135 1ri6_A Putative isomerase YBHE 99.8 4.1E-18 1.4E-22 171.6 25.4 231 295-543 7-262 (343)
136 2oit_A Nucleoporin 214KDA; NH2 99.8 1.6E-18 5.3E-23 182.8 23.1 206 324-544 36-279 (434)
137 1nir_A Nitrite reductase; hemo 99.8 5.4E-18 1.8E-22 183.7 26.5 228 295-547 192-462 (543)
138 3vgz_A Uncharacterized protein 99.8 1.9E-17 6.4E-22 167.8 28.6 223 302-550 68-310 (353)
139 1ri6_A Putative isomerase YBHE 99.8 2.8E-17 9.5E-22 165.5 27.6 229 295-542 51-307 (343)
140 3hfq_A Uncharacterized protein 99.8 4E-17 1.4E-21 165.8 28.8 225 301-542 61-316 (347)
141 3u4y_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 164.6 27.9 227 295-544 54-305 (331)
142 2ojh_A Uncharacterized protein 99.8 1.2E-17 4E-22 163.9 22.7 218 295-534 55-293 (297)
143 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-17 4.3E-22 175.8 23.3 235 295-542 50-332 (434)
144 3vgz_A Uncharacterized protein 99.8 1.6E-16 5.5E-21 160.9 29.3 218 295-534 103-335 (353)
145 1xfd_A DIP, dipeptidyl aminope 99.8 7.3E-18 2.5E-22 188.6 19.4 229 295-540 30-341 (723)
146 2ecf_A Dipeptidyl peptidase IV 99.8 2.4E-17 8.2E-22 185.0 21.1 230 295-542 50-366 (741)
147 2z3z_A Dipeptidyl aminopeptida 99.7 1.5E-16 5.2E-21 177.5 22.6 230 295-545 94-393 (706)
148 2ecf_A Dipeptidyl peptidase IV 99.7 1.1E-16 3.9E-21 179.5 18.6 203 324-550 36-328 (741)
149 2z3z_A Dipeptidyl aminopeptida 99.7 1.4E-15 4.7E-20 169.8 25.7 228 295-545 134-437 (706)
150 3o4h_A Acylamino-acid-releasin 99.7 2.2E-16 7.4E-21 172.4 18.8 221 295-541 35-274 (582)
151 3hfq_A Uncharacterized protein 99.7 1.8E-15 6.1E-20 153.6 24.1 225 300-543 13-271 (347)
152 1k32_A Tricorn protease; prote 99.7 6.1E-16 2.1E-20 180.6 20.3 223 294-545 215-463 (1045)
153 3scy_A Hypothetical bacterial 99.7 2.8E-14 9.4E-19 145.7 29.3 225 300-542 24-290 (361)
154 3fvz_A Peptidyl-glycine alpha- 99.7 1.7E-14 6E-19 145.8 27.1 225 301-545 67-324 (329)
155 1xfd_A DIP, dipeptidyl aminope 99.7 2.6E-16 8.9E-21 176.0 14.5 201 326-549 18-295 (723)
156 1k32_A Tricorn protease; prote 99.7 1.3E-15 4.4E-20 177.8 20.7 220 295-543 258-502 (1045)
157 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.6E-15 1.6E-19 152.2 21.5 233 295-544 53-342 (365)
158 1q7f_A NHL, brain tumor CG1071 99.7 6.4E-14 2.2E-18 138.0 28.5 225 295-544 43-281 (286)
159 3scy_A Hypothetical bacterial 99.7 9.6E-14 3.3E-18 141.6 30.6 227 295-542 63-336 (361)
160 1z68_A Fibroblast activation p 99.6 5.5E-16 1.9E-20 173.5 13.4 232 295-545 29-348 (719)
161 3o4h_A Acylamino-acid-releasin 99.6 3.7E-15 1.3E-19 162.6 19.6 196 324-547 21-231 (582)
162 1pby_B Quinohemoprotein amine 99.6 6.5E-14 2.2E-18 140.3 26.3 189 295-509 48-319 (337)
163 3no2_A Uncharacterized protein 99.6 9.1E-14 3.1E-18 137.1 25.3 212 295-530 7-230 (276)
164 1jmx_B Amine dehydrogenase; ox 99.6 1.9E-13 6.5E-18 137.7 25.7 191 295-509 57-334 (349)
165 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.8E-13 6.1E-18 140.3 24.9 221 303-543 14-291 (365)
166 4a5s_A Dipeptidyl peptidase 4 99.6 2.4E-14 8.2E-19 161.0 19.2 232 295-546 30-356 (740)
167 1z68_A Fibroblast activation p 99.6 2.9E-15 9.8E-20 167.6 9.5 197 329-549 20-297 (719)
168 2oiz_A Aromatic amine dehydrog 99.6 2.8E-13 9.5E-18 138.9 22.6 227 301-550 29-343 (361)
169 1q7f_A NHL, brain tumor CG1071 99.5 2.6E-12 8.8E-17 126.5 26.5 198 322-542 27-237 (286)
170 3pe7_A Oligogalacturonate lyas 99.5 1E-13 3.5E-18 142.4 16.3 233 295-546 49-332 (388)
171 3pe7_A Oligogalacturonate lyas 99.5 3.8E-13 1.3E-17 138.2 20.4 200 330-546 41-276 (388)
172 3fvz_A Peptidyl-glycine alpha- 99.5 1.7E-12 5.9E-17 131.1 24.0 207 324-550 23-284 (329)
173 3azo_A Aminopeptidase; POP fam 99.5 5.8E-13 2E-17 147.3 21.5 221 300-541 44-321 (662)
174 2gop_A Trilobed protease; beta 99.5 8.1E-13 2.8E-17 133.6 20.1 207 301-544 41-292 (347)
175 3dsm_A Uncharacterized protein 99.5 4.1E-12 1.4E-16 128.3 24.4 223 299-546 13-256 (328)
176 4a5s_A Dipeptidyl peptidase 4 99.5 2.6E-13 8.8E-18 152.6 16.9 195 326-545 18-296 (740)
177 1rwi_B Serine/threonine-protei 99.5 4.1E-12 1.4E-16 123.5 23.4 225 298-547 41-268 (270)
178 2dg1_A DRP35, lactonase; beta 99.5 2.1E-11 7.3E-16 122.5 29.3 224 295-542 58-315 (333)
179 3dsm_A Uncharacterized protein 99.5 4.6E-12 1.6E-16 128.0 22.2 234 295-551 56-309 (328)
180 3azo_A Aminopeptidase; POP fam 99.5 3.2E-12 1.1E-16 141.4 22.7 229 296-545 94-371 (662)
181 3e5z_A Putative gluconolactona 99.5 2.3E-11 7.9E-16 120.4 26.0 219 295-545 42-288 (296)
182 2dg1_A DRP35, lactonase; beta 99.4 1.7E-11 5.9E-16 123.2 24.7 222 300-542 24-262 (333)
183 3c5m_A Oligogalacturonate lyas 99.4 1.1E-12 3.8E-17 134.6 15.9 222 303-546 60-332 (396)
184 3no2_A Uncharacterized protein 99.4 6.3E-12 2.2E-16 123.8 19.5 191 335-551 4-203 (276)
185 2xdw_A Prolyl endopeptidase; a 99.4 1.2E-11 4.3E-16 138.1 24.3 223 304-545 152-416 (710)
186 3e5z_A Putative gluconolactona 99.4 6.1E-11 2.1E-15 117.3 25.9 201 323-542 26-245 (296)
187 1qks_A Cytochrome CD1 nitrite 99.4 3.3E-10 1.1E-14 122.6 31.4 226 295-543 169-421 (567)
188 3c5m_A Oligogalacturonate lyas 99.4 1.4E-12 4.8E-17 133.9 11.2 202 327-546 38-276 (396)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2E-10 7E-15 113.9 26.4 224 299-544 42-300 (314)
190 2z2n_A Virginiamycin B lyase; 99.4 1.1E-09 3.9E-14 107.4 30.9 224 295-542 28-254 (299)
191 2xdw_A Prolyl endopeptidase; a 99.4 5E-11 1.7E-15 133.2 23.2 207 322-545 122-370 (710)
192 2mad_H Methylamine dehydrogena 99.3 1.6E-09 5.4E-14 111.4 29.9 222 304-549 48-356 (373)
193 2bkl_A Prolyl endopeptidase; m 99.3 7.2E-11 2.5E-15 131.6 21.2 227 298-545 142-399 (695)
194 2oiz_A Aromatic amine dehydrog 99.3 9E-11 3.1E-15 120.2 20.0 207 301-525 79-360 (361)
195 2bkl_A Prolyl endopeptidase; m 99.3 1.7E-10 5.8E-15 128.6 23.5 201 322-542 118-348 (695)
196 2z2n_A Virginiamycin B lyase; 99.3 9.3E-09 3.2E-13 100.8 33.2 223 295-544 70-296 (299)
197 3hrp_A Uncharacterized protein 99.3 1.6E-09 5.6E-14 112.7 28.6 225 295-542 144-409 (409)
198 1qks_A Cytochrome CD1 nitrite 99.3 6E-10 2.1E-14 120.6 24.5 194 334-550 165-380 (567)
199 1xip_A Nucleoporin NUP159; bet 99.2 1.7E-10 5.8E-15 118.4 18.2 179 326-529 39-230 (388)
200 2qc5_A Streptogramin B lactona 99.2 9.1E-09 3.1E-13 100.9 30.2 224 295-542 33-259 (300)
201 2gop_A Trilobed protease; beta 99.2 3E-10 1E-14 114.6 19.5 205 304-542 86-330 (347)
202 1rwi_B Serine/threonine-protei 99.2 7.8E-10 2.7E-14 107.2 21.0 196 326-544 25-223 (270)
203 3g4e_A Regucalcin; six bladed 99.2 4.1E-09 1.4E-13 104.5 25.0 213 295-532 27-261 (297)
204 1yr2_A Prolyl oligopeptidase; 99.2 6.7E-10 2.3E-14 124.7 20.6 223 303-545 189-443 (741)
205 2qc5_A Streptogramin B lactona 99.2 5.1E-08 1.7E-12 95.4 31.7 221 295-542 75-299 (300)
206 1xip_A Nucleoporin NUP159; bet 99.2 4.4E-10 1.5E-14 115.3 16.7 160 294-487 50-231 (388)
207 3c75_H MADH, methylamine dehyd 99.1 1.4E-09 4.9E-14 113.0 19.4 227 303-550 99-409 (426)
208 1yr2_A Prolyl oligopeptidase; 99.1 3.8E-09 1.3E-13 118.5 23.7 201 323-542 161-392 (741)
209 2ghs_A AGR_C_1268P; regucalcin 99.1 4.1E-08 1.4E-12 98.7 26.9 207 295-532 63-291 (326)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.3E-08 4.4E-13 100.8 22.7 203 324-547 17-260 (314)
211 3g4e_A Regucalcin; six bladed 99.1 4.3E-08 1.5E-12 97.0 25.1 207 325-550 13-236 (297)
212 3hrp_A Uncharacterized protein 99.0 2.5E-08 8.5E-13 103.7 23.1 196 324-545 130-356 (409)
213 3dr2_A Exported gluconolactona 99.0 3.1E-08 1E-12 98.4 22.3 217 295-540 59-303 (305)
214 3sjl_D Methylamine dehydrogena 99.0 9E-09 3.1E-13 105.2 18.4 226 300-551 106-371 (386)
215 2hz6_A Endoplasmic reticulum t 99.0 9.1E-11 3.1E-15 120.5 1.8 201 295-524 11-215 (369)
216 2ghs_A AGR_C_1268P; regucalcin 99.0 1.5E-07 5.3E-12 94.4 25.2 196 327-542 51-259 (326)
217 3iuj_A Prolyl endopeptidase; h 98.9 3.9E-08 1.3E-12 109.5 21.4 227 299-545 151-407 (693)
218 1mda_H Methylamine dehydrogena 98.9 9E-09 3.1E-13 105.1 14.6 220 304-551 47-354 (368)
219 1yiq_A Quinohemoprotein alcoho 98.9 2.3E-07 7.9E-12 103.0 25.0 244 295-551 123-513 (689)
220 2hz6_A Endoplasmic reticulum t 98.9 1.5E-10 5.1E-15 118.9 -1.7 186 335-550 8-199 (369)
221 1kb0_A Quinohemoprotein alcoho 98.8 4E-07 1.4E-11 100.9 24.5 229 302-545 189-569 (677)
222 3hxj_A Pyrrolo-quinoline quino 98.8 2.5E-07 8.4E-12 92.2 20.4 218 295-546 109-327 (330)
223 3iuj_A Prolyl endopeptidase; h 98.8 1.2E-07 4.1E-12 105.5 19.9 200 322-544 126-360 (693)
224 1yiq_A Quinohemoprotein alcoho 98.8 1E-06 3.4E-11 97.8 27.2 233 301-548 181-574 (689)
225 1fwx_A Nitrous oxide reductase 98.8 5.1E-08 1.8E-12 103.9 15.9 228 294-544 103-432 (595)
226 2ece_A 462AA long hypothetical 98.8 6.9E-07 2.4E-11 92.2 23.7 224 293-531 96-399 (462)
227 1kb0_A Quinohemoprotein alcoho 98.8 1.8E-07 6.3E-12 103.5 19.9 244 295-551 130-515 (677)
228 3dr2_A Exported gluconolactona 98.8 6.7E-07 2.3E-11 88.7 22.1 200 323-542 43-266 (305)
229 1npe_A Nidogen, entactin; glyc 98.8 4.7E-06 1.6E-10 80.7 27.5 227 303-550 10-245 (267)
230 2qe8_A Uncharacterized protein 98.8 2E-07 6.8E-12 94.3 18.2 207 325-544 17-279 (343)
231 2ece_A 462AA long hypothetical 98.8 2E-06 7E-11 88.7 25.3 202 334-544 93-353 (462)
232 2qe8_A Uncharacterized protein 98.8 2.7E-07 9.3E-12 93.3 18.8 199 322-539 64-317 (343)
233 3sjl_D Methylamine dehydrogena 98.7 3E-07 1E-11 94.0 18.2 222 302-550 58-327 (386)
234 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2E-06 6.8E-11 87.7 24.0 226 295-550 55-303 (376)
235 2mad_H Methylamine dehydrogena 98.7 2.4E-06 8.3E-11 87.5 24.2 189 333-544 29-244 (373)
236 2iwa_A Glutamine cyclotransfer 98.7 6.1E-06 2.1E-10 79.9 24.7 196 325-545 21-239 (266)
237 1npe_A Nidogen, entactin; glyc 98.7 3.2E-05 1.1E-09 74.7 29.7 207 295-525 50-263 (267)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.7 6.8E-06 2.3E-10 83.7 25.5 224 295-550 105-344 (376)
239 1fwx_A Nitrous oxide reductase 98.5 5.4E-06 1.8E-10 88.4 19.4 191 335-543 100-361 (595)
240 1ijq_A LDL receptor, low-densi 98.5 0.00059 2E-08 67.8 33.3 230 303-550 10-245 (316)
241 3c75_H MADH, methylamine dehyd 98.5 2.2E-06 7.5E-11 89.0 15.8 188 334-543 82-295 (426)
242 3nol_A Glutamine cyclotransfer 98.5 2E-05 7E-10 75.5 21.2 180 325-531 43-243 (262)
243 3nok_A Glutaminyl cyclase; bet 98.5 2.5E-05 8.5E-10 74.9 21.4 181 325-532 55-255 (268)
244 2fp8_A Strictosidine synthase; 98.4 0.0001 3.5E-09 73.3 26.8 222 296-543 33-313 (322)
245 2ad6_A Methanol dehydrogenase 98.4 3.4E-05 1.2E-09 83.5 24.2 242 295-551 117-502 (571)
246 1kv9_A Type II quinohemoprotei 98.4 2E-05 6.8E-10 87.1 22.2 242 295-551 119-496 (668)
247 1kv9_A Type II quinohemoprotei 98.4 7.5E-05 2.5E-09 82.5 26.0 234 302-550 177-559 (668)
248 2iwa_A Glutamine cyclotransfer 98.4 2.7E-05 9.3E-10 75.3 19.7 160 377-551 22-189 (266)
249 3v65_B Low-density lipoprotein 98.3 0.00024 8.3E-09 72.8 27.3 232 295-550 89-325 (386)
250 3v64_C Agrin; beta propeller, 98.3 0.00045 1.5E-08 69.8 28.9 226 302-550 52-282 (349)
251 3mbr_X Glutamine cyclotransfer 98.3 0.00025 8.7E-09 67.2 25.1 181 324-531 20-222 (243)
252 3hxj_A Pyrrolo-quinoline quino 98.3 2.7E-06 9.1E-11 84.5 11.7 210 295-541 32-242 (330)
253 3p5b_L Low density lipoprotein 98.3 0.0015 5.1E-08 67.2 31.7 238 295-550 85-327 (400)
254 3nol_A Glutamine cyclotransfer 98.3 3E-05 1E-09 74.3 17.0 159 377-551 44-209 (262)
255 3nok_A Glutaminyl cyclase; bet 98.2 8.6E-05 2.9E-09 71.2 19.0 158 377-551 56-218 (268)
256 2ad6_A Methanol dehydrogenase 98.2 0.00017 5.7E-09 78.0 23.9 138 385-529 311-523 (571)
257 3sov_A LRP-6, low-density lipo 98.2 0.00083 2.8E-08 66.9 26.7 230 302-550 12-245 (318)
258 4a2l_A BT_4663, two-component 98.2 0.0011 3.7E-08 74.7 30.5 230 298-545 188-438 (795)
259 1mda_H Methylamine dehydrogena 98.2 2.1E-05 7.2E-10 80.1 14.9 213 300-522 93-366 (368)
260 3mbr_X Glutamine cyclotransfer 98.2 0.00022 7.5E-09 67.7 20.7 160 376-551 21-187 (243)
261 1w6s_A Methanol dehydrogenase 98.1 0.00047 1.6E-08 74.8 25.3 212 301-528 180-531 (599)
262 3qqz_A Putative uncharacterize 98.1 0.0014 4.9E-08 62.7 24.3 196 324-541 26-251 (255)
263 1w6s_A Methanol dehydrogenase 98.1 0.00017 5.9E-09 78.2 20.0 241 296-551 124-511 (599)
264 1flg_A Protein (quinoprotein e 98.1 0.00043 1.5E-08 75.0 22.9 60 490-551 465-524 (582)
265 3tc9_A Hypothetical hydrolase; 98.0 0.003 1E-07 65.6 28.5 221 303-542 159-429 (430)
266 2p4o_A Hypothetical protein; p 98.0 0.0017 5.9E-08 63.9 25.4 215 295-533 45-278 (306)
267 1flg_A Protein (quinoprotein e 98.0 0.00049 1.7E-08 74.5 22.0 138 385-529 331-545 (582)
268 4hw6_A Hypothetical protein, I 98.0 0.003 1E-07 65.7 26.7 219 303-542 162-432 (433)
269 2fp8_A Strictosidine synthase; 98.0 0.00074 2.5E-08 67.0 20.9 198 326-542 20-268 (322)
270 3m0c_C LDL receptor, low-densi 97.9 0.01 3.4E-07 66.4 31.9 232 302-550 403-639 (791)
271 3v64_C Agrin; beta propeller, 97.9 0.0065 2.2E-07 61.1 27.3 192 295-508 87-283 (349)
272 4a2l_A BT_4663, two-component 97.9 0.02 6.8E-07 64.2 33.8 219 295-544 369-615 (795)
273 1ijq_A LDL receptor, low-densi 97.9 0.012 4.2E-07 58.1 28.5 191 295-508 44-246 (316)
274 3qqz_A Putative uncharacterize 97.9 0.0031 1.1E-07 60.4 22.6 192 295-498 41-251 (255)
275 4a0p_A LRP6, LRP-6, low-densit 97.9 0.012 4E-07 64.2 30.0 234 295-550 8-244 (628)
276 2p4o_A Hypothetical protein; p 97.9 0.0028 9.5E-08 62.3 22.9 193 325-542 32-241 (306)
277 3v65_B Low-density lipoprotein 97.9 0.0042 1.4E-07 63.5 24.9 203 295-520 130-337 (386)
278 3p5b_L Low density lipoprotein 97.8 0.023 7.8E-07 58.2 30.2 200 299-520 130-339 (400)
279 3amr_A 3-phytase; beta-propell 97.8 0.0041 1.4E-07 62.0 23.0 193 335-550 39-271 (355)
280 3sov_A LRP-6, low-density lipo 97.8 0.0078 2.7E-07 59.7 25.2 191 295-508 49-246 (318)
281 3tc9_A Hypothetical hydrolase; 97.8 0.0011 3.8E-08 68.9 19.2 159 377-543 138-301 (430)
282 1k3i_A Galactose oxidase precu 97.7 0.00066 2.3E-08 74.7 17.5 227 304-544 220-498 (656)
283 3kya_A Putative phosphatase; s 97.7 0.026 8.9E-07 59.2 28.1 230 301-546 160-478 (496)
284 2xe4_A Oligopeptidase B; hydro 97.7 0.0022 7.4E-08 71.7 21.2 196 326-541 175-398 (751)
285 3v9f_A Two-component system se 97.6 0.063 2.2E-06 60.0 32.1 230 295-544 270-525 (781)
286 3v9f_A Two-component system se 97.6 0.027 9.2E-07 63.0 28.9 225 295-544 325-569 (781)
287 1n7d_A LDL receptor, low-densi 97.6 0.00026 8.8E-09 78.5 12.1 228 301-546 384-617 (699)
288 3amr_A 3-phytase; beta-propell 97.6 0.014 4.9E-07 58.1 23.3 187 300-508 47-272 (355)
289 3s94_A LRP-6, low-density lipo 97.6 0.018 6.2E-07 62.6 26.0 227 301-547 16-247 (619)
290 2p9w_A MAL S 1 allergenic prot 97.5 0.0059 2E-07 60.3 18.7 198 328-543 16-265 (334)
291 3m0c_C LDL receptor, low-densi 97.4 0.1 3.4E-06 58.3 29.4 190 296-508 439-640 (791)
292 2xe4_A Oligopeptidase B; hydro 97.4 0.0045 1.5E-07 69.2 17.9 224 303-545 201-460 (751)
293 2p9w_A MAL S 1 allergenic prot 97.2 0.021 7.2E-07 56.4 19.0 159 377-543 14-215 (334)
294 4a0p_A LRP6, LRP-6, low-densit 97.2 0.24 8.2E-06 53.8 29.3 189 295-507 51-244 (628)
295 1n7d_A LDL receptor, low-densi 97.2 0.0015 5.2E-08 72.3 11.8 198 300-521 425-634 (699)
296 4hw6_A Hypothetical protein, I 97.2 0.017 5.8E-07 59.9 18.8 158 377-543 140-304 (433)
297 2xbg_A YCF48-like protein; pho 97.0 0.15 5E-06 50.5 23.0 189 325-541 122-320 (327)
298 2vpj_A Kelch-like protein 12; 96.9 0.065 2.2E-06 52.0 19.5 222 303-544 31-279 (301)
299 3s94_A LRP-6, low-density lipo 96.9 0.5 1.7E-05 51.2 28.0 229 295-544 319-552 (619)
300 1k3i_A Galactose oxidase precu 96.9 0.01 3.5E-07 65.1 14.4 202 329-543 190-441 (656)
301 4asc_A Kelch repeat and BTB do 96.7 0.21 7.2E-06 48.7 21.1 229 295-544 7-278 (315)
302 3ii7_A Kelch-like protein 7; p 96.6 0.12 4.2E-06 50.1 18.9 229 295-544 14-273 (306)
303 2xn4_A Kelch-like protein 2; s 96.6 0.24 8.1E-06 48.0 20.8 192 335-544 61-277 (302)
304 3kya_A Putative phosphatase; s 96.4 0.11 3.7E-06 54.5 17.8 161 377-543 140-341 (496)
305 3sre_A PON1, serum paraoxonase 96.4 0.44 1.5E-05 47.6 21.6 189 301-508 81-308 (355)
306 3pbp_A Nucleoporin NUP82; beta 96.4 0.13 4.5E-06 52.4 17.3 148 382-539 27-208 (452)
307 2xzh_A Clathrin heavy chain 1; 96.4 0.88 3E-05 44.7 26.5 233 295-551 80-340 (365)
308 2xzh_A Clathrin heavy chain 1; 96.2 1.1 3.7E-05 44.0 22.3 225 301-547 47-294 (365)
309 2woz_A Kelch repeat and BTB do 96.1 0.54 1.9E-05 45.8 20.3 227 295-544 18-288 (318)
310 3ei3_A DNA damage-binding prot 96.0 3.3 0.00011 48.2 30.2 229 294-543 572-873 (1158)
311 3sre_A PON1, serum paraoxonase 96.0 0.62 2.1E-05 46.6 20.0 198 328-540 53-295 (355)
312 2xbg_A YCF48-like protein; pho 95.9 1.5 5E-05 43.1 27.6 188 324-536 79-272 (327)
313 2ism_A Putative oxidoreductase 95.9 0.67 2.3E-05 46.2 20.0 204 325-544 31-298 (352)
314 1zgk_A Kelch-like ECH-associat 95.8 0.5 1.7E-05 45.8 18.6 149 386-544 121-288 (308)
315 3ott_A Two-component system se 95.7 2.7 9.3E-05 46.4 26.3 190 324-544 62-261 (758)
316 2vpj_A Kelch-like protein 12; 95.7 0.93 3.2E-05 43.6 19.6 189 295-502 65-280 (301)
317 3ei3_A DNA damage-binding prot 95.6 2.7 9.4E-05 48.8 26.0 215 295-532 525-756 (1158)
318 1bpo_A Protein (clathrin); cla 95.6 2.5 8.4E-05 43.2 26.0 232 295-550 79-338 (494)
319 2ism_A Putative oxidoreductase 95.4 0.93 3.2E-05 45.2 19.1 191 324-531 74-333 (352)
320 1bpo_A Protein (clathrin); cla 95.2 3.2 0.00011 42.4 24.2 225 301-547 46-293 (494)
321 3ii7_A Kelch-like protein 7; p 94.9 1.8 6.2E-05 41.6 19.2 189 295-502 58-274 (306)
322 3a9g_A Putative uncharacterize 94.9 2.2 7.6E-05 42.4 20.1 204 325-543 29-296 (354)
323 3pbp_A Nucleoporin NUP82; beta 94.7 0.7 2.4E-05 47.1 15.3 113 425-549 26-164 (452)
324 2xn4_A Kelch-like protein 2; s 94.6 2.5 8.4E-05 40.5 19.2 190 295-503 64-279 (302)
325 3a9g_A Putative uncharacterize 94.4 4.5 0.00015 40.2 24.9 198 324-531 72-330 (354)
326 2g8s_A Glucose/sorbosone dehyd 94.3 4.6 0.00016 40.0 22.1 70 464-536 270-347 (353)
327 2be1_A Serine/threonine-protei 94.3 0.41 1.4E-05 47.5 12.6 116 295-415 12-139 (339)
328 2uvk_A YJHT; unknown function, 94.2 1.4 4.6E-05 43.6 16.6 140 397-547 168-346 (357)
329 3ott_A Two-component system se 93.7 9.8 0.00034 41.8 24.5 191 324-544 21-221 (758)
330 1zgk_A Kelch-like ECH-associat 93.6 3.5 0.00012 39.6 17.9 181 303-502 90-289 (308)
331 2zwa_A Leucine carboxyl methyl 92.6 3.1 0.00011 45.5 17.5 197 295-504 400-639 (695)
332 3s25_A Hypothetical 7-bladed b 92.5 8.1 0.00028 37.4 22.0 204 302-546 87-296 (302)
333 1xi4_A Clathrin heavy chain; a 92.1 3.1 0.00011 48.8 16.6 232 295-550 79-338 (1630)
334 3sbq_A Nitrous-oxide reductase 92.0 14 0.00048 38.9 21.7 217 294-531 144-453 (638)
335 1cru_A Protein (soluble quinop 91.6 12 0.0004 38.5 19.5 113 371-488 22-162 (454)
336 3das_A Putative oxidoreductase 91.0 13 0.00045 36.7 18.4 151 371-530 27-219 (347)
337 1tl2_A L10, protein (tachylect 90.8 8.6 0.00029 35.5 15.2 143 376-537 41-204 (236)
338 3s25_A Hypothetical 7-bladed b 90.6 13 0.00043 36.0 24.3 205 300-546 34-258 (302)
339 2g8s_A Glucose/sorbosone dehyd 90.5 14 0.00049 36.3 20.7 209 326-544 19-309 (353)
340 1xi4_A Clathrin heavy chain; a 90.4 6.8 0.00023 46.1 17.2 227 301-547 46-293 (1630)
341 2woz_A Kelch repeat and BTB do 90.0 5.4 0.00019 38.4 14.5 113 385-505 157-292 (318)
342 4asc_A Kelch repeat and BTB do 89.6 3.5 0.00012 39.8 12.8 112 385-504 147-281 (315)
343 3qhy_B Beta-lactamase inhibito 89.6 2.5 8.6E-05 40.5 11.5 207 302-547 41-250 (282)
344 2be1_A Serine/threonine-protei 88.9 1.6 5.4E-05 43.3 9.5 110 388-509 11-139 (339)
345 1cru_A Protein (soluble quinop 88.7 8.8 0.0003 39.5 15.6 111 325-439 27-163 (454)
346 3no0_A DNA gyrase subunit A; D 86.7 22 0.00075 33.7 20.8 197 325-543 24-246 (276)
347 2zwa_A Leucine carboxyl methyl 86.4 32 0.0011 37.4 19.2 200 334-544 396-636 (695)
348 3sbq_A Nitrous-oxide reductase 85.8 35 0.0012 36.0 17.5 230 295-543 72-408 (638)
349 1tl2_A L10, protein (tachylect 83.7 23 0.00077 32.7 13.5 138 387-542 4-162 (236)
350 2uvk_A YJHT; unknown function, 82.5 27 0.00091 34.0 15.1 56 447-508 286-350 (357)
351 3qhy_B Beta-lactamase inhibito 82.1 11 0.00038 35.9 11.7 183 325-544 24-208 (282)
352 3uc1_A DNA gyrase subunit A; D 81.9 40 0.0014 32.9 18.1 196 323-534 93-321 (327)
353 3uc1_A DNA gyrase subunit A; D 81.2 42 0.0014 32.7 23.4 205 323-543 40-279 (327)
354 1zi0_A DNA gyrase subunit A; b 80.5 43 0.0015 32.3 24.4 235 295-543 5-277 (307)
355 4gq2_M Nucleoporin NUP120; bet 74.1 66 0.0023 36.4 16.6 76 377-454 237-316 (950)
356 3das_A Putative oxidoreductase 70.0 86 0.0029 30.7 26.4 215 301-531 51-326 (347)
357 3l6v_A GYRA, DNA gyrase subuni 69.1 94 0.0032 30.8 28.0 237 295-543 9-316 (370)
358 2wg3_C Hedgehog-interacting pr 61.3 1.1E+02 0.0038 31.2 13.8 104 421-534 15-160 (463)
359 1suu_A DNA gyrase subunit A; t 61.0 1.2E+02 0.0041 29.1 23.3 194 334-543 6-231 (312)
360 2wg3_C Hedgehog-interacting pr 60.8 84 0.0029 32.2 12.8 107 326-439 15-158 (463)
361 1wp5_A Topoisomerase IV; broke 54.2 1.6E+02 0.0054 28.4 25.2 235 295-543 7-277 (323)
362 1suu_A DNA gyrase subunit A; t 50.8 1.7E+02 0.0059 27.9 27.4 235 295-543 10-283 (312)
363 3b7f_A Glycosyl hydrolase, BNR 50.5 1.9E+02 0.0064 28.2 21.1 141 377-530 116-296 (394)
364 4fhn_B Nucleoporin NUP120; pro 48.4 31 0.0011 40.0 7.8 38 377-414 239-276 (1139)
365 1wp5_A Topoisomerase IV; broke 47.3 2E+02 0.0069 27.6 21.5 193 334-543 3-225 (323)
366 3no0_A DNA gyrase subunit A; D 44.7 2E+02 0.0069 26.9 16.8 111 295-406 82-196 (276)
367 4gq2_M Nucleoporin NUP120; bet 41.7 80 0.0027 35.7 9.7 38 466-508 237-274 (950)
368 3q6k_A 43.2 kDa salivary prote 40.7 2.8E+02 0.0096 27.4 17.3 138 398-543 124-306 (381)
369 3kci_A Probable E3 ubiquitin-p 39.1 2.9E+02 0.0098 27.0 23.1 192 337-543 63-293 (389)
370 1zi0_A DNA gyrase subunit A; b 37.6 2.7E+02 0.0093 26.4 20.3 196 334-543 1-226 (307)
371 3zwu_A Alkaline phosphatase PH 35.7 1.2E+02 0.004 32.3 9.1 59 467-530 478-548 (592)
372 3l6v_A GYRA, DNA gyrase subuni 35.4 3.3E+02 0.011 26.7 21.5 196 333-543 4-265 (370)
373 3zwu_A Alkaline phosphatase PH 32.6 1.2E+02 0.004 32.2 8.5 61 378-439 478-550 (592)
374 4a9v_A PHOX; hydrolase, beta-p 30.3 2.1E+02 0.0071 30.2 9.7 61 466-531 477-549 (592)
375 3f7f_A Nucleoporin NUP120; nuc 30.0 68 0.0023 34.8 6.2 37 377-415 223-259 (729)
376 1q47_A Semaphorin 3A; beta pro 30.0 1.5E+02 0.0051 30.6 8.7 72 466-538 405-487 (495)
377 4fhn_B Nucleoporin NUP120; pro 29.5 1.5E+02 0.005 34.3 9.4 37 513-549 238-274 (1139)
378 3al9_A Plexin-A2; beta-propell 28.6 1.2E+02 0.004 31.8 7.7 71 465-538 400-476 (539)
379 3kci_A Probable E3 ubiquitin-p 28.1 4.3E+02 0.015 25.7 25.8 201 326-543 106-345 (389)
380 2rod_B NOXA, noxaa; MCL-1, apo 25.5 15 0.0005 20.4 -0.0 6 74-79 2-7 (27)
381 3ol2_B Plexin-B1; beta-propell 23.5 1.7E+02 0.0058 30.5 7.6 71 465-538 387-461 (528)
382 4a9v_A PHOX; hydrolase, beta-p 22.6 3.2E+02 0.011 28.8 9.4 63 376-439 476-550 (592)
383 4gz8_A Semaphorin-3A; multi-do 22.4 2.2E+02 0.0076 30.6 8.4 72 466-538 413-495 (667)
384 1w53_A Phosphoserine phosphata 22.3 42 0.0014 25.5 2.0 17 114-130 43-59 (84)
385 3nvq_A Semaphorin-7A; beta-pro 21.3 2.8E+02 0.0097 29.2 8.8 73 466-538 363-444 (590)
386 1p4q_A CBP/P300-interacting tr 21.3 29 0.001 23.0 0.8 13 82-94 36-48 (52)
No 1
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=100.00 E-value=1.7e-80 Score=623.15 Aligned_cols=197 Identities=47% Similarity=0.856 Sum_probs=191.7
Q ss_pred CCCCCCCcccCCCCCChHHHHhcccCCcccchhhhhcccCCCcCCCCccccHHHHHHHhccCCcCccccccccccccCcc
Q psy10778 6 GGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLNYQDNNFDLPDRTFHNLATTWRLTSSESTTDVKELIPELFYLADI 85 (556)
Q Consensus 6 ~~~~~~~~~~~~~~s~~~~v~~~l~r~~pf~~~~~~~~~~~~d~~~r~f~~~~~~~~~~~~~~~~~~~e~~pef~~~~~~ 85 (556)
.+...+|||||||||++++|++||+|+||||++++.||+|+||+|||+|+||+++|+++. .+++|+|||||||||+|||
T Consensus 217 ~~~~~~~f~ygshyS~~~~V~~yL~R~ePft~~~~~lq~g~fD~~dR~F~Si~~~w~~~~-~~~~d~kElIPEFf~~Pe~ 295 (414)
T 1t77_A 217 EDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQ-RDTSDIKELIPEFYYLPEM 295 (414)
T ss_dssp CCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHH-HCTTCCCCBCGGGGTCGGG
T ss_pred cccCCCCcccCCCCCCHHHHHHHHhcCCcHHHHHHHHhcCCcCCCccchhhHHHHHHHHh-ccCCCccccCchhhcChHh
Confidence 456779999999999999999999999999999999999999999999999999999875 5689999999999999999
Q ss_pred eecCCCCCcccccCCceeCeEecCCCCCCHHHHHHHHHHhhhhhhhhcccCceEEEEeecCCCCHHHHhccccCCCcccc
Q psy10778 86 LVNNEGFDFGVRQNGQRVDSVILPPWASDPRTFIMVHRQSLESELVSENLPHWIDLVFGYKQSGKAAVDAINVFHPATYY 165 (556)
Q Consensus 86 ~~n~~~~~~~~~~~~~~~~~v~lp~w~~~~~~f~~~~r~~les~~v~~~l~~widl~fg~~~~~~~~~~~~n~~~~~~y~ 165 (556)
|+|.|+|+||++|+|+.|+||+|||||++|++||++||+||||+|||+|||+||||||||||+|++|++|.|||||++|+
T Consensus 296 l~N~n~~~lG~~~~g~~v~DV~LP~Wa~sp~~FI~~~R~aLES~~VS~~Lh~WIDLiFGykq~G~~Av~a~Nvf~~ltY~ 375 (414)
T 1t77_A 296 FVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYE 375 (414)
T ss_dssp GSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGGST
T ss_pred hccccCCccccccCCCCCCceeCCCCCCCHHHHHHHHHHHHcChHhhhhhhhhhhhhcCcccCCHHHHhcCCccccceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cccCCCCCHHHHHHHHHHHHhcCCcccccccCCCCCC
Q psy10778 166 G-FDIAAIPDPLERTAWETMIRTYGQTPRQLFKSAHPMN 203 (556)
Q Consensus 166 ~-~~~~~~~d~~~~~~~~~~~~~~g~~p~~lf~~~h~~~ 203 (556)
| +|++.++|+.+|.++++||++|||+|.|||++|||+|
T Consensus 376 ~~vd~~~i~d~~~~~a~~~~i~~fGQ~P~QLF~~pHP~R 414 (414)
T 1t77_A 376 GAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 414 (414)
T ss_dssp TSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred CcccccccCCHHHHHHHHHHHHHcCCChhhhhcCCCCCC
Confidence 8 8999999999999999999999999999999999985
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.1e-34 Score=288.13 Aligned_cols=236 Identities=14% Similarity=0.164 Sum_probs=210.4
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||.+++.....+. .|...|.+++|++++++|++|+.|++|++||+.++ +.+..+.+|
T Consensus 27 ~l~s~~~dg~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~---------~~~~~~~~h 96 (304)
T 2ynn_A 27 WVLTTLYSGRVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG---------EKVVDFEAH 96 (304)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC---------CEEEEEECC
T ss_pred EEEEEcCCCcEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC---------cEEEEEeCC
Confidence 88999999999999999887776665 78899999999999999999999999999999876 556789999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC-eEEEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI-GYIREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~-~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
.+.|++++|+|+++++++|+.||+|++||++++ .....+.+ | ...|.+++|+| ++..+++++ .|++|++||
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~~l~sgs-----~D~~v~iwd 169 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H-EHFVMCVAFNPKDPSTFASGC-----LDRTVKVWS 169 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC-C-CSCEEEEEECTTCTTEEEEEE-----TTSEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc-c-CCcEEEEEECCCCCCEEEEEe-----CCCeEEEEE
Confidence 999999999999999999999999999999887 45567888 9 89999999999 578899999 899999999
Q ss_pred eC-CcEEEEe--ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 453 IN-AQLITSL--ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 453 i~-g~~i~~~--~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
++ +.....+ .+...+..++|++.+++ .+|++|+.||.|++||+.+++++..+. +|...|.+++|+|++.+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~s~s~D~~i~iWd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDK---PYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp TTCSSCSEEEECCCTTCEEEEEECCSTTC---CEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEE
T ss_pred CCCCCccceeccCCcCcEEEEEEEEcCCC---CEEEEEcCCCeEEEEeCCCCccceeeC-CCCCCEEEEEECCCCCEEEE
Confidence 96 4333333 35578999999966677 899999999999999999999999998 89999999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCcCeee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
|+.||.|++||+.+++....+.
T Consensus 246 ~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 246 GSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EETTSCEEEEETTTCCEEEEEC
T ss_pred EcCCCeEEEEECCCCceeeecc
Confidence 9999999999999877655543
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-34 Score=298.33 Aligned_cols=234 Identities=15% Similarity=0.200 Sum_probs=216.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||..+++....+. +|.+.|++++|+|++++|++|+.||+|++||+... +.+..+.+|
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~---------~~~~~~~~h 191 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF---------ECIRTMHGH 191 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS---------CEEECCCCC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEe-ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---------ceeEEEcCC
Confidence 89999999999999999998887776 89999999999999999999999999999998765 456778899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.+++|+|+++.+++|+.||+|++||++++..+.++.+ | ...|.++++++++..+++++ .|+.|++||++
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h-~~~v~~~~~~~~g~~l~s~s-----~D~~v~vwd~~ 264 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-H-REWVRMVRPNQDGTLIASCS-----NDQTVRVWVVA 264 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEETT
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-C-CccEEEEEECCCCCEEEEEc-----CCCeEEEEECC
Confidence 99999999999999999999999999999999999999999 9 89999999999999999999 89999999997
Q ss_pred -CcEEEEe-ecCCCeEEEEEeeCCC--------------------CCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCC
Q psy10778 455 -AQLITSL-ASELRITSVTFSNAPE--------------------GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVA 512 (556)
Q Consensus 455 -g~~i~~~-~~~~~i~~i~~s~~pd--------------------g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~ 512 (556)
++....+ .|...|.+++|+ |+ | .+|++|+.||.|++||+.+++++..+. +|.
T Consensus 265 ~~~~~~~~~~h~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g---~~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~ 338 (410)
T 1vyh_C 265 TKECKAELREHRHVVECISWA--PESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCLMTLV-GHD 338 (410)
T ss_dssp TCCEEEEECCCSSCEEEEEEC--CSCGGGGGGGCCSCC-------C---CEEEEEETTSEEEEEETTTTEEEEEEE-CCS
T ss_pred CCceeeEecCCCceEEEEEEc--CcccccchhhhccccccccCCCC---CEEEEEeCCCeEEEEECCCCceEEEEE-CCC
Confidence 6666666 477899999999 54 4 689999999999999999999999998 899
Q ss_pred CCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 513 LPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 513 ~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
..|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 999999999999999999999999999999877766654
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=285.53 Aligned_cols=225 Identities=17% Similarity=0.222 Sum_probs=208.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.|++|++||+.+++....+. .|...+.+++|+|++++|++|+.||.|++|++..+ +....+..|
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~---------~~~~~~~~~ 163 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---------KKEYSLDTR 163 (321)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC---------SEEEEEECS
T ss_pred EEEEEeCCCcEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC---------ceeEEecCC
Confidence 89999999999999999887777665 67888999999999999999999999999999865 445678889
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.+++|+|++++|++|+.||.|++||+++++.+..+.. | ..+|.+++|+|++.+|++++ .|+.|++||++
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-h-~~~v~~l~~spd~~~l~s~s-----~dg~i~iwd~~ 236 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-H-AMPIRSLTFSPDSQLLVTAS-----DDGYIKIYDVQ 236 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-C-SSCCCEEEECTTSCEEEEEC-----TTSCEEEEETT
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-c-CCceeEEEEcCCCCEEEEEc-----CCCeEEEEECC
Confidence 99999999999999999999999999999999999999999 9 89999999999999999999 89999999997
Q ss_pred -CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcC
Q psy10778 455 -AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNT 532 (556)
Q Consensus 455 -g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~ 532 (556)
++.+..+. |...|.+++|+ |++ .+|++|+.||+|++||+.+++++..+. +|...|.+++|+|+++.|++++.
T Consensus 237 ~~~~~~~~~~h~~~v~~~~~s--p~~---~~l~s~s~D~~v~iwd~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 237 HANLAGTLSGHASWVLNVAFC--PDD---THFVSSSSDKSVKVWDVGTRTCVHTFF-DHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp TCCEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CcceeEEEcCCCCceEEEEEC--CCC---CEEEEEeCCCcEEEEeCCCCEEEEEEc-CCCCcEEEEEECCCCCEEEEEeC
Confidence 67776664 77899999999 898 899999999999999999999999998 89999999999999999999999
Q ss_pred CCcEEEEEcC
Q psy10778 533 EGLVIIWESS 542 (556)
Q Consensus 533 Dg~V~vwdl~ 542 (556)
||.|++||.+
T Consensus 311 d~~i~vwd~p 320 (321)
T 3ow8_A 311 DQEIHIYDCP 320 (321)
T ss_dssp TCCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 9999999974
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=289.83 Aligned_cols=233 Identities=16% Similarity=0.068 Sum_probs=196.9
Q ss_pred cceEEeccCCCeEEEEeCCCCCCcceEc---CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 293 AGMICWNECDNLIRLKMSKELPATPVIR---PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 293 ~~~l~~gs~Dg~I~lw~~~~~~~~~~~~---~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
.+.+++|+.||+|+|||+.+++...... .+|.+.|++++|+|+|++|++|+.||+|++||+.++ +++.
T Consensus 93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~---------~~~~ 163 (344)
T 4gqb_B 93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ---------VVLS 163 (344)
T ss_dssp TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------EEEE
T ss_pred CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---------cEEE
Confidence 3478899999999999999887654432 379999999999999999999999999999999876 5668
Q ss_pred EeeCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCC-CCCCCeeEEEEeCCC-CeEEEEeecCcCCCC
Q psy10778 370 ILLGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCV-DPNTPVSHVTMSETN-GEIASVLQTTKTGGS 446 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~-h~~~~V~~l~~sp~~-~~i~s~s~~~~~~d~ 446 (556)
.+.+|.+.|++++|++++. ++++|+.||+|++||+++++.+..+... + ...+.+++|+|++ .++++++ .|+
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~l~sg~-----~dg 237 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAP-GYLPTSLAWHPQQSEVFVFGD-----ENG 237 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEE-----TTS
T ss_pred EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeeccee-eccceeeeecCCCCcceEEec-----cCC
Confidence 8999999999999999884 8899999999999999999988887531 3 4578999999965 5677787 899
Q ss_pred eEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCC
Q psy10778 447 ILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDS 524 (556)
Q Consensus 447 ~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg 524 (556)
.|++||++ ++++..+. |...|++++|+ |++. ++|++|+.||+|++||+.+++++. +. +|...|++++|+|++
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fs--p~g~--~~lasgs~D~~i~vwd~~~~~~~~-~~-~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFS--PHSV--PFLASLSEDCSLAVLDSSLSELFR-SQ-AHRDFVRDATWSPLN 311 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEEC--SSSS--CCEEEEETTSCEEEECTTCCEEEE-EC-CCSSCEEEEEECSSS
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEc--cCCC--eEEEEEeCCCeEEEEECCCCcEEE-Ec-CCCCCEEEEEEeCCC
Confidence 99999997 77777764 78899999999 7763 589999999999999998887664 44 799999999999998
Q ss_pred C-EEEEEcCCCcEEEEEcCCCCC
Q psy10778 525 Q-HLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 525 ~-~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
+ +|++|+.||+|++|+++++..
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEEcCCCeEEEEECCCCCC
Confidence 5 677999999999999988543
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=284.15 Aligned_cols=235 Identities=15% Similarity=0.190 Sum_probs=213.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcce-EcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPV-IRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~-~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++|+.|++|++|+..+++.... ...+|...|.++++++++..+++|+.|++|++||+..+ +.+..+..
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~---------~~~~~~~~ 120 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG---------KQIKSIDA 120 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---------EEEEEEEC
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC---------CEEEEEeC
Confidence 899999999999999876643322 22389999999999999999999999999999999866 45577888
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
|...+.+++|+|++++|++|+.||.|++||+.+++....+.. + ...|.+++|+|++++|++++ .|+.|++||+
T Consensus 121 ~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~-~~~v~~~~~spdg~~lasg~-----~dg~i~iwd~ 193 (321)
T 3ow8_A 121 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-R-GKFILSIAYSPDGKYLASGA-----IDGIINIFDI 193 (321)
T ss_dssp CTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-S-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEET
T ss_pred CCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-C-CceEEEEEECCCCCEEEEEc-----CCCeEEEEEC
Confidence 999999999999999999999999999999999999988888 7 88999999999999999999 8999999999
Q ss_pred C-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 454 N-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 454 ~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
+ ++.+..+. |...|.+++|+ |++ ++|++|+.||.|++||+.+++.+..+. +|...|.+++|+|++++|++++
T Consensus 194 ~~~~~~~~~~~h~~~v~~l~~s--pd~---~~l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s 267 (321)
T 3ow8_A 194 ATGKLLHTLEGHAMPIRSLTFS--PDS---QLLVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSS 267 (321)
T ss_dssp TTTEEEEEECCCSSCCCEEEEC--TTS---CEEEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEEcccCCceeEEEEc--CCC---CEEEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEEEECCCCCEEEEEe
Confidence 7 77777775 67899999999 899 899999999999999999999999998 8999999999999999999999
Q ss_pred CCCcEEEEEcCCCCCcCeee
Q psy10778 532 TEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.||.|++||+.+++.+..+.
T Consensus 268 ~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 268 SDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp TTSCEEEEETTTTEEEEEEC
T ss_pred CCCcEEEEeCCCCEEEEEEc
Confidence 99999999999877665553
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.9e-32 Score=278.23 Aligned_cols=223 Identities=17% Similarity=0.239 Sum_probs=201.4
Q ss_pred ceEEeccCCCeEEEEeCCCCCC----cceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 294 GMICWNECDNLIRLKMSKELPA----TPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~----~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
.++++|+.|+.+++|++.+... ...+ .+|.+.|.+++|++++ .+++|+.|++|++||+.++ +.+.
T Consensus 110 ~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~---------~~~~ 178 (340)
T 1got_B 110 NYVACGGLDNICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETG---------QQTT 178 (340)
T ss_dssp SEEEEEETTCEEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTT---------EEEE
T ss_pred CEEEEEeCCCeEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCC---------cEEE
Confidence 3899999999999999986532 1223 3799999999999876 5899999999999999866 4557
Q ss_pred EeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 370 ILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
.+.+|.+.|.+++|+|+++++++|+.||+|++||+++++.+.++.. | ...|.+++|+|++..|++++ .|+.|+
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~l~s~s-----~d~~v~ 251 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-H-ESDINAICFFPNGNAFATGS-----DDATCR 251 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEE
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC-C-cCCEEEEEEcCCCCEEEEEc-----CCCcEE
Confidence 8899999999999999999999999999999999999999999999 9 89999999999999999999 899999
Q ss_pred EEEeC-CcEEEEeecC---CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC
Q psy10778 450 LHTIN-AQLITSLASE---LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 450 iwdi~-g~~i~~~~~~---~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
+||++ ++.+..+.+. ..|.+++|+ |+| ++|++|+.||.|++||+.+++.+..+. +|..+|++++|+|+|.
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~~g---~~l~~g~~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFS--KSG---RLLLAGYDDFNCNVWDALKADRAGVLA-GHDNRVSCLGVTDDGM 325 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEEC--TTS---SEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSS
T ss_pred EEECCCCcEEEEEccCCcccceEEEEEC--CCC---CEEEEECCCCeEEEEEcccCcEeeEee-cCCCcEEEEEEcCCCC
Confidence 99997 6666666543 479999999 899 899999999999999999999999998 8999999999999999
Q ss_pred EEEEEcCCCcEEEEE
Q psy10778 526 HLYASNTEGLVIIWE 540 (556)
Q Consensus 526 ~l~sgs~Dg~V~vwd 540 (556)
+|++|+.||.|++||
T Consensus 326 ~l~s~s~D~~i~iWd 340 (340)
T 1got_B 326 AVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEcCCccEEecC
Confidence 999999999999996
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9e-33 Score=289.65 Aligned_cols=225 Identities=15% Similarity=0.204 Sum_probs=207.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.|++|++||..+++....+. +|...|++++|+|++++|++|+.|++|++||+.++ .++..+.+|
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~---------~~~~~~~~h 233 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG---------YCVKTFTGH 233 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCC-CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---------CEEEEEECC
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------cEEEEEeCC
Confidence 89999999999999998877666654 89999999999999999999999999999999876 556788999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCC--------------------CCeE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSET--------------------NGEI 434 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~--------------------~~~i 434 (556)
...|.++++++++.++++|+.||+|++||+.+++....+.. | ...|.+++|+|+ +.++
T Consensus 234 ~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 311 (410)
T 1vyh_C 234 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-H-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-C-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEE
T ss_pred CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC-C-CceEEEEEEcCcccccchhhhccccccccCCCCCEE
Confidence 99999999999999999999999999999999999999998 9 899999999996 5689
Q ss_pred EEEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCC
Q psy10778 435 ASVLQTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVA 512 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~ 512 (556)
++++ .|+.|++||++ +..+..+. |...|.+++|+ |+| ++|++|+.||.|++||+.+++++..+. +|.
T Consensus 312 ~sgs-----~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~--~~g---~~l~s~s~D~~i~vwd~~~~~~~~~~~-~h~ 380 (410)
T 1vyh_C 312 LSGS-----RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGG---KFILSCADDKTLRVWDYKNKRCMKTLN-AHE 380 (410)
T ss_dssp EEEE-----TTSEEEEEETTTTEEEEEEECCSSCEEEEEEC--SSS---SCEEEEETTTEEEEECCTTSCCCEEEE-CCS
T ss_pred EEEe-----CCCeEEEEECCCCceEEEEECCCCcEEEEEEc--CCC---CEEEEEeCCCeEEEEECCCCceEEEEc-CCC
Confidence 9998 89999999997 77777764 77899999999 888 899999999999999999999999998 899
Q ss_pred CCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 513 LPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 513 ~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
..|++++|+|++.+|++|+.||.|++|+++
T Consensus 381 ~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999999863
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.9e-32 Score=274.60 Aligned_cols=238 Identities=19% Similarity=0.236 Sum_probs=210.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||..+++....+. .|...|.+++|+|++++|++|+.|+.|++|++...... ......+.+|
T Consensus 69 ~l~s~s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~-----~~~~~~~~~h 142 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN-----VRVSRELAGH 142 (340)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS-----CEEEEEEECC
T ss_pred EEEEEeCCCcEEEEECCCCCcceEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc-----ceeEEEecCC
Confidence 88999999999999999887777665 78999999999999999999999999999998754211 1234678899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
.+.|.++.|++++. +++++.||+|++||+.+++.+..+.+ | ...|.+++|+|++..+++++ .|+.|++||++
T Consensus 143 ~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~l~sg~-----~d~~v~~wd~~ 214 (340)
T 1got_B 143 TGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG-H-TGDVMSLSLAPDTRLFVSGA-----CDASAKLWDVR 214 (340)
T ss_dssp SSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEETT
T ss_pred CccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC-C-CCceEEEEECCCCCEEEEEe-----CCCcEEEEECC
Confidence 99999999998875 88999999999999999999999999 9 89999999999999999999 89999999997
Q ss_pred -CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEEEc
Q psy10778 455 -AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 455 -g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs 531 (556)
+..+..+. |...|.+++|+ |++ ++|++|+.||.|++||+++++.+..+.. .+...|++++|+|+|++|++|+
T Consensus 215 ~~~~~~~~~~h~~~v~~v~~~--p~~---~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 215 EGMCRQTFTGHESDINAICFF--PNG---NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp TCSEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeeEEEEcCCcCCEEEEEEc--CCC---CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 77777774 77899999999 899 8999999999999999999988887753 2345799999999999999999
Q ss_pred CCCcEEEEEcCCCCCcCeee
Q psy10778 532 TEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.||.|++||+.+.+....+.
T Consensus 290 ~d~~i~vwd~~~~~~~~~~~ 309 (340)
T 1got_B 290 DDFNCNVWDALKADRAGVLA 309 (340)
T ss_dssp TTSEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEEcccCcEeeEee
Confidence 99999999998877665554
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-32 Score=281.15 Aligned_cols=233 Identities=18% Similarity=0.122 Sum_probs=189.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcc---eEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNECDNLIRLKMSKELPATP---VIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~---~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
.++.++.||+|++||+.+++... ....+|.+.|++++|+|++++|++|+.||+|++||+.++ +.+..+
T Consensus 107 ~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~---------~~~~~~ 177 (357)
T 4g56_B 107 GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK---------AVLKSY 177 (357)
T ss_dssp EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT---------EEEEEE
T ss_pred CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---------cEEEEE
Confidence 56667889999999998765432 233479999999999999999999999999999998866 556788
Q ss_pred eCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCC-CCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeE
Q psy10778 372 LGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPC-VDPNTPVSHVTMSETNG-EIASVLQTTKTGGSIL 448 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~-~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I 448 (556)
.+|...|++++|++++. ++++++.||+|++||+++++.+..+.. .+ ...+.+++|+|++. .+++++ .++.|
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~v~~v~~sp~~~~~la~g~-----~d~~i 251 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS-DTIPTSVTWHPEKDDTFACGD-----ETGNV 251 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC-CSCEEEEEECTTSTTEEEEEE-----SSSCE
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccc-cccccchhhhhcccceEEEee-----cccce
Confidence 99999999999999875 889999999999999999887665542 14 67899999999854 677777 89999
Q ss_pred EEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEec-CCC
Q psy10778 449 RLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSC-DSQ 525 (556)
Q Consensus 449 ~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~-dg~ 525 (556)
++||++ ++.+..+. +...|++++|+ |++. ++|++|+.||+|+|||+.+++.+..+ +|...|++++|+| +++
T Consensus 252 ~~wd~~~~~~~~~~~~~~~~v~~l~~s--p~~~--~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 252 SLVNIKNPDSAQTSAVHSQNITGLAYS--YHSS--PFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp EEEESSCGGGCEEECCCSSCEEEEEEC--SSSS--CCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTT
T ss_pred eEEECCCCcEeEEEeccceeEEEEEEc--CCCC--CEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCC
Confidence 999997 66666664 67899999999 7663 58999999999999999999888776 5999999999998 799
Q ss_pred EEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 526 HLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 526 ~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
+|++|+.||.|++|++++..+..
T Consensus 326 ~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp EEEEEETTSCEEEEECC------
T ss_pred EEEEEcCCCeEEEEECCCCCccc
Confidence 99999999999999998754443
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-31 Score=270.52 Aligned_cols=223 Identities=17% Similarity=0.189 Sum_probs=200.0
Q ss_pred eEEeccCCCeEEEEeCCCCC------CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 295 MICWNECDNLIRLKMSKELP------ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~------~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
++++|+.|+.+++|++.... ....+. .|...|.+++|++++..|++|+.||+|++||+..+ +.+
T Consensus 120 ~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---------~~~ 189 (354)
T 2pbi_B 120 AIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---------QLL 189 (354)
T ss_dssp EEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---------CEE
T ss_pred EEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---------eEE
Confidence 89999999999999986432 122232 69999999999999999999999999999999876 556
Q ss_pred eEeeCCCccEEEEEEcc--CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC
Q psy10778 369 TILLGHSACVTDLYLCA--GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS 446 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~--~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~ 446 (556)
..+.+|...|.+++++| ++..+++|+.||+|++||+++++.+..+.. | ...|.+++|+|++..|++++ .|+
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~l~s~s-----~D~ 262 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-H-ESDVNSVRYYPSGDAFASGS-----DDA 262 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTS
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-C-CCCeEEEEEeCCCCEEEEEe-----CCC
Confidence 88999999999999987 468999999999999999999999999999 9 89999999999999999999 899
Q ss_pred eEEEEEeC-CcEEEEeec---CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEec
Q psy10778 447 ILRLHTIN-AQLITSLAS---ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSC 522 (556)
Q Consensus 447 ~I~iwdi~-g~~i~~~~~---~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~ 522 (556)
+|++||++ ++.+..+.. ...+.+++|+ |+| ++|++|+.||.|++||+.+++.+..+. +|...|++++|+|
T Consensus 263 ~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s--~~g---~~l~~g~~d~~i~vwd~~~~~~~~~l~-~h~~~v~~l~~sp 336 (354)
T 2pbi_B 263 TCRLYDLRADREVAIYSKESIIFGASSVDFS--LSG---RLLFAGYNDYTINVWDVLKGSRVSILF-GHENRVSTLRVSP 336 (354)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECT
T ss_pred eEEEEECCCCcEEEEEcCCCcccceeEEEEe--CCC---CEEEEEECCCcEEEEECCCCceEEEEE-CCCCcEEEEEECC
Confidence 99999998 555555543 3478999999 899 899999999999999999999999887 8999999999999
Q ss_pred CCCEEEEEcCCCcEEEEE
Q psy10778 523 DSQHLYASNTEGLVIIWE 540 (556)
Q Consensus 523 dg~~l~sgs~Dg~V~vwd 540 (556)
+|++|++|+.||.|++|+
T Consensus 337 dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 337 DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSCEEEEETTSEEEEEC
T ss_pred CCCEEEEEcCCCCEEecC
Confidence 999999999999999995
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.7e-31 Score=263.50 Aligned_cols=234 Identities=21% Similarity=0.266 Sum_probs=207.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. +|...|.+++|+|++++|++|+.||.|++||+..+ +.+..+.+|
T Consensus 37 ~l~s~~~dg~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~---------~~~~~~~~~ 106 (312)
T 4ery_A 37 WLASSSADKLIKIWGAYDGKFEKTIS-GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG---------KCLKTLKGH 106 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------CEEEEEECC
T ss_pred EEEEeeCCCeEEEEeCCCcccchhhc-cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC---------cEEEEEcCC
Confidence 88899999999999999887777665 89999999999999999999999999999999865 556788999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.+++|+|+++++++|+.||.|++||+++++.+..+.. | ..+|.+++|+|++..+++++ .|+.|++||++
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~-----~d~~i~~wd~~ 179 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-H-SDPVSAVHFNRDGSLIVSSS-----YDGLCRIWDTA 179 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEETT
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-C-CCcEEEEEEcCCCCEEEEEe-----CCCcEEEEECC
Confidence 99999999999999999999999999999999999999998 8 89999999999999999999 89999999997
Q ss_pred -CcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeE---EEEEecCCCEEE
Q psy10778 455 -AQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVI---AVTYSCDSQHLY 528 (556)
Q Consensus 455 -g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~---~l~~s~dg~~l~ 528 (556)
++.+..+. +...+.+++|+ |++ ++|++++.||.|++||+.+++.+..+. +|...+. .....+++.+|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSFVKFS--PNG---KYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp TCCEEEEECCSSCCCEEEEEEC--TTS---SEEEEEETTTEEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEE
T ss_pred CCceeeEEeccCCCceEEEEEC--CCC---CEEEEEcCCCeEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEE
Confidence 67666653 45689999999 899 899999999999999999999999987 5654432 223346789999
Q ss_pred EEcCCCcEEEEEcCCCCCcCeee
Q psy10778 529 ASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 529 sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+|+.||.|++||+.+++.+..+.
T Consensus 254 sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp ECCTTSCEEEEETTTCCEEEEEC
T ss_pred EECCCCEEEEEECCCchhhhhhh
Confidence 99999999999999877665554
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-31 Score=267.13 Aligned_cols=226 Identities=16% Similarity=0.216 Sum_probs=202.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.|++|++||+.+++....+. +|...|.+++|+|++.+|++|+.|++|++||+.. ..+..+.+|
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----------~~~~~~~~h 147 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----------QCLATLLGH 147 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----------CEEEEECCC
T ss_pred EEEEEeCCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----------CeEEEEecc
Confidence 89999999999999999988777665 8999999999999999999999999999999863 345778899
Q ss_pred CccEEEEEEccC------CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 375 SACVTDLYLCAG------FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 375 ~~~V~~l~~s~~------~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
...|.+++++|. +..+++++.|++|++||+++++....+.+ | ...|.+++|+|++.+|++++ .|+.|
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-h-~~~v~~~~~sp~g~~l~s~~-----~dg~i 220 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-H-NSNINTLTASPDGTLIASAG-----KDGEI 220 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC-C-CSCEEEEEECTTSSEEEEEE-----TTCEE
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC-C-CCcEEEEEEcCCCCEEEEEe-----CCCeE
Confidence 999999999985 44899999999999999999999999999 9 99999999999999999999 89999
Q ss_pred EEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-------CCCCCeEEEEE
Q psy10778 449 RLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-------NVALPVIAVTY 520 (556)
Q Consensus 449 ~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-------~h~~~V~~l~~ 520 (556)
++||++ ++.+..+.....+.+++|+ |++ .+|++++. +.+++|++.....+..+.. .|...+.+++|
T Consensus 221 ~iwd~~~~~~~~~~~~~~~v~~~~~s--p~~---~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 294 (319)
T 3frx_A 221 MLWNLAAKKAMYTLSAQDEVFSLAFS--PNR---YWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAW 294 (319)
T ss_dssp EEEETTTTEEEEEEECCSCEEEEEEC--SSS---SEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEE
T ss_pred EEEECCCCcEEEEecCCCcEEEEEEc--CCC---CEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEE
Confidence 999997 7788888888899999999 888 78888775 4599999988887777652 23567999999
Q ss_pred ecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 521 SCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 521 s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
+|||++|++|+.||.|++||+.+.
T Consensus 295 spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 295 SADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCCEEEEeecCceEEEEEEeec
Confidence 999999999999999999998764
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=273.79 Aligned_cols=207 Identities=18% Similarity=0.190 Sum_probs=177.4
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEE
Q psy10778 322 PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLL 401 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~i 401 (556)
.|...|++++|+++ ..|++|+.||+|+|||+.++.... .....+.+|.+.|++++|+|++++|++|+.||+|++
T Consensus 80 ~~~~~v~~~~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~-----~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~i 153 (344)
T 4gqb_B 80 QTEAGVADLTWVGE-RGILVASDSGAVELWELDENETLI-----VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKV 153 (344)
T ss_dssp EESSCEEEEEEETT-TEEEEEETTSEEEEEEECTTSSCE-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ccCCCEEEEEEeCC-CeEEEEECCCEEEEEeccCCCcee-----EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 46678999999998 578899999999999998762110 111345689999999999999999999999999999
Q ss_pred EeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeEEEEEeC-CcEEEEee---cCCCeEEEEEeeCC
Q psy10778 402 WDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTGGSILRLHTIN-AQLITSLA---SELRITSVTFSNAP 476 (556)
Q Consensus 402 wdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~---~~~~i~~i~~s~~p 476 (556)
||+.+++.++++.+ | ...|.+++|++++. .+++++ .|++|++||++ ++.+..+. +...+.+++|+ |
T Consensus 154 wd~~~~~~~~~~~~-h-~~~V~~~~~~~~~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--p 224 (344)
T 4gqb_B 154 WDLAQQVVLSSYRA-H-AAQVTCVAASPHKDSVFLSCS-----EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH--P 224 (344)
T ss_dssp EETTTTEEEEEECC-C-SSCEEEEEECSSCTTEEEEEE-----TTSCEEEEETTSSSCEEECC----CCCEEEEEEC--S
T ss_pred EECCCCcEEEEEcC-c-CCceEEEEecCCCCCceeeec-----cccccccccccccceeeeeecceeeccceeeeec--C
Confidence 99999999999999 9 99999999999985 567888 89999999997 77666653 45678999999 6
Q ss_pred CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCC-CEEEEEcCCCcEEEEEcCCCCC
Q psy10778 477 EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDS-QHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 477 dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg-~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
++. ++|++|+.||.|++||+++++++..+. +|...|++++|+|++ ++|++|+.||.|+|||+.+++.
T Consensus 225 ~~~--~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 225 QQS--EVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SCT--TEEEEEETTSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CCC--cceEEeccCCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 432 789999999999999999999999998 899999999999998 5799999999999999988654
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-30 Score=267.64 Aligned_cols=241 Identities=15% Similarity=0.223 Sum_probs=210.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+|++|+.||+|++||..+++....+. .|...|.+++|+|+|..+++|+.|+.+++|++........ ......+.+|
T Consensus 78 ~l~s~s~Dg~v~vWd~~~~~~~~~~~-~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~---~~~~~~~~~h 153 (354)
T 2pbi_B 78 RIVSSSQDGKVIVWDSFTTNKEHAVT-MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM---AAKKKSVAMH 153 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCS---GGGCEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCCcceEEe-cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccc---cccceeeecc
Confidence 89999999999999998887766665 6888999999999999999999999999999875421111 1345678899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC--CCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE--TNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp--~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
...|.+++|++++..|++++.||+|++||+.+++.+..+.+ | ...|.+++++| ++..+++++ .|+.|++||
T Consensus 154 ~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h-~~~v~~~~~~~~~~g~~l~sgs-----~Dg~v~~wd 226 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-H-GADVLCLDLAPSETGNTFVSGG-----CDKKAMVWD 226 (354)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-C-SSCEEEEEECCCSSCCEEEEEE-----TTSCEEEEE
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-C-CCCeEEEEEEeCCCCCEEEEEe-----CCCeEEEEE
Confidence 99999999999999999999999999999999999999999 9 89999999987 467999999 899999999
Q ss_pred eC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEE
Q psy10778 453 IN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 453 i~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~s 529 (556)
++ ++.+..+. |...|.+++|+ |++ ++|++|+.||+|++||++.++.+..+.. .+...+++++|+|++++|++
T Consensus 227 ~~~~~~~~~~~~h~~~v~~v~~~--p~~---~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 227 MRSGQCVQAFETHESDVNSVRYY--PSG---DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEecCCCCCeEEEEEe--CCC---CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 97 77777774 77899999999 888 8999999999999999999888777753 23457899999999999999
Q ss_pred EcCCCcEEEEEcCCCCCcCeee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
|+.||.|++||+.+++.+..+.
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l~ 323 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSILF 323 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEEC
T ss_pred EECCCcEEEEECCCCceEEEEE
Confidence 9999999999998877655443
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-31 Score=267.05 Aligned_cols=235 Identities=16% Similarity=0.179 Sum_probs=189.8
Q ss_pred eEEeccCCCeEEEEeCCCCCC--cceEcCC-CCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNECDNLIRLKMSKELPA--TPVIRPP-LGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~--~~~~~~~-h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
+|++|+.|++|++|++..+.. ...+..+ |...|++++|+|++++|++|+.|++|++|++...... ....+.+..+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~--~~~~~~~~~~ 103 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR--TFEMDLLAII 103 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC---------CCCEEEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc--cccceeEEEE
Confidence 889999999999999987532 3334234 9999999999999999999999999999998643110 0111345678
Q ss_pred eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC----CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCe
Q psy10778 372 LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT----IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~----~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~ 447 (556)
.+|...|.+++|+|++++|++|+.|++|++||++. .+.+..+.. | ...|.+++|+|++..|++++ .|++
T Consensus 104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~l~s~s-----~D~~ 176 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE-H-SQDVKHVIWHPSEALLASSS-----YDDT 176 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC-C-SSCEEEEEECSSSSEEEEEE-----TTSC
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc-C-CCceEEEEECCCCCEEEEEc-----CCCe
Confidence 89999999999999999999999999999999943 256778888 9 89999999999999999999 8999
Q ss_pred EEEEEeC-C--cEEEEe-ecCCCeEEEEEeeCCC--CCcceEEEEEeCCCeEEEEeCCCC--------eEEEEecCCCCC
Q psy10778 448 LRLHTIN-A--QLITSL-ASELRITSVTFSNAPE--GVSQNVIVTGHSDGTIQLWSGYKL--------AHLLTLNTNVAL 513 (556)
Q Consensus 448 I~iwdi~-g--~~i~~~-~~~~~i~~i~~s~~pd--g~~~~~l~tg~~dg~I~iwd~~~~--------~~~~~~~~~h~~ 513 (556)
|++||.+ + +.+..+ .|...|.+++|+ |+ + ..|++|+.|++|++||+..+ .....+...|..
T Consensus 177 i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~---~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (330)
T 2hes_X 177 VRIWKDYDDDWECVAVLNGHEGTVWSSDFD--KTEGV---FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKR 251 (330)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEEC--CSSSS---CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSS
T ss_pred EEEEECCCCCeeEEEEccCCCCcEEEEEec--CCCCe---eEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccccc
Confidence 9999986 3 455555 478899999999 55 6 68999999999999998654 445555534889
Q ss_pred CeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 514 PVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.|.+++|++++ .|++++.||.|++|+..++
T Consensus 252 ~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 252 QVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp CEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred ceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 99999999765 7899999999999998765
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-30 Score=268.40 Aligned_cols=226 Identities=15% Similarity=0.174 Sum_probs=197.9
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.++++|+.|+.|++||..+++....+. +|...|++++|+|++++|++|+.|++|++||+.++ +....+ .
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~---------~~~~~~-~ 204 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQ-GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG---------QCSLTL-S 204 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------EEEEEE-E
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEc-cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC---------eeEEEE-E
Confidence 389999999999999999887766665 89999999999999999999999999999998765 222333 3
Q ss_pred CCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEe-------CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCC
Q psy10778 374 HSACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREI-------PCVDPNTPVSHVTMSETNGEIASVLQTTKTGG 445 (556)
Q Consensus 374 h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l-------~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d 445 (556)
+...+.+++|+| +++++++|+.||+|++||+++++.+..+ .+ | ...|.+++|+|++..|++++ .|
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~-h-~~~v~~v~~~~~g~~l~s~s-----~d 277 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG-H-KDSVYSVVFTRDGQSVVSGS-----LD 277 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CC-C-SSCEEEEEECTTSSEEEEEE-----TT
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCC-C-CCCEEEEEECCCCCEEEEEe-----CC
Confidence 667899999999 8999999999999999999999888776 45 7 78999999999999999999 89
Q ss_pred CeEEEEEeCC-------------cEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC
Q psy10778 446 SILRLHTINA-------------QLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV 511 (556)
Q Consensus 446 ~~I~iwdi~g-------------~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h 511 (556)
+.|++||++. .....+ .|...|.+++|+ +++ .+|++|+.||.|++||..+++.+..+. +|
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~---~~l~sgs~D~~v~iwd~~~~~~~~~l~-~h 351 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT--QND---EYILSGSKDRGVLFWDKKSGNPLLMLQ-GH 351 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEEC--GGG---CEEEEEETTSEEEEEETTTCCEEEEEE-CC
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC--CCC---CEEEEEeCCCeEEEEECCCCeEEEEEC-CC
Confidence 9999999852 122233 467889999999 888 899999999999999999999999998 89
Q ss_pred CCCeEEEEEec------CCCEEEEEcCCCcEEEEEcCC
Q psy10778 512 ALPVIAVTYSC------DSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 512 ~~~V~~l~~s~------dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
...|.+++|++ ++.+|++|+.||.|++|++++
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999986 688999999999999999865
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=1.5e-30 Score=266.24 Aligned_cols=231 Identities=15% Similarity=0.210 Sum_probs=197.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCc--ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPAT--PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~--~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+|++|+.|++|++|+..++... .....+|...|++++|+|++++|++|+.|++|++|+..... .+.+..+.
T Consensus 30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-------~~~~~~~~ 102 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-------FECVTTLE 102 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--------EEEEEEEC
T ss_pred EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-------eEEEEEcc
Confidence 8999999999999999876533 22334799999999999999999999999999999987541 12356789
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC---eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI---GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~---~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
+|...|.+++|+|++++|++|+.|++|++||+.++ +.+..+.. | ...|.+++|+|++..|++++ .|+.|+
T Consensus 103 ~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-h-~~~v~~~~~~p~~~~l~s~s-----~d~~i~ 175 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-H-TQDVKHVVWHPSQELLASAS-----YDDTVK 175 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-C-CSCEEEEEECSSSSCEEEEE-----TTSCEE
T ss_pred CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-c-CCCeEEEEECCCCCEEEEEe-----CCCcEE
Confidence 99999999999999999999999999999999875 34667888 8 89999999999999999999 899999
Q ss_pred EEEeC-Cc--EEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC---------------CeEEEEecCC
Q psy10778 450 LHTIN-AQ--LITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK---------------LAHLLTLNTN 510 (556)
Q Consensus 450 iwdi~-g~--~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~---------------~~~~~~~~~~ 510 (556)
+||.+ ++ ....+ .|...|.+++|+ |+| ++|++|+.||+|++||... .+++..+...
T Consensus 176 ~w~~~~~~~~~~~~~~~h~~~v~~l~~s--p~g---~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T 3fm0_A 176 LYREEEDDWVCCATLEGHESTVWSLAFD--PSG---QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250 (345)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS
T ss_pred EEEecCCCEEEEEEecCCCCceEEEEEC--CCC---CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCC
Confidence 99997 43 23344 477899999999 899 8999999999999999632 2345556534
Q ss_pred CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 511 VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 511 h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
|...|.+++|++++..|++++.|+.|++|+....
T Consensus 251 h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 251 HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 8899999999999999999999999999998764
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=6.2e-30 Score=255.88 Aligned_cols=232 Identities=13% Similarity=0.142 Sum_probs=191.6
Q ss_pred eEEeccCCCeEEEEeCCCC--CCcceEcCCCCCceEEEEEcCC--CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKEL--PATPVIRPPLGATIATATTAPD--CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--~~~~~~~~~h~~~V~~i~~s~d--g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+|++|+.|++|++|+..+. +....+. +|.+.|++++|+++ +++|++|+.||+|++||+..+. ...+..
T Consensus 23 ~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~-------~~~~~~ 94 (297)
T 2pm7_B 23 RMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR-------WSQIAV 94 (297)
T ss_dssp EEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC-------BCCCEE
T ss_pred EEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc-------eEEEEE
Confidence 8999999999999999743 4455554 89999999999864 8999999999999999987541 134567
Q ss_pred eeCCCccEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCC-------------CCe
Q psy10778 371 LLGHSACVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSET-------------NGE 433 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~-------------~~~ 433 (556)
+.+|...|.+++|+|+ +.+|++|+.||+|++||++++. ....+.. | ...|.+++|+|+ +..
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~-h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA-H-AIGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC-C-SSCEEEEEECCCC------------CCE
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec-c-cCccceEeecCCcccccccCCCCCCcce
Confidence 8899999999999997 8899999999999999998763 2456677 8 889999999997 468
Q ss_pred EEEEeecCcCCCCeEEEEEeC-Cc----EEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe---EE
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-AQ----LITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA---HL 504 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g~----~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~---~~ 504 (556)
|++++ .|++|++||++ ++ +...+ .|...|.+++|+ |++....+|++|+.|++|++||+.... ..
T Consensus 173 l~sgs-----~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s--p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~ 245 (297)
T 2pm7_B 173 FVTGG-----ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK 245 (297)
T ss_dssp EEEEE-----TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCEEEEEESSTTSCCEE
T ss_pred EEEEc-----CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC--CCCCCceEEEEEECCCcEEEEEeCCCCCccce
Confidence 99999 89999999997 43 44455 477899999999 663111799999999999999987643 22
Q ss_pred EEec-CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 505 LTLN-TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 505 ~~~~-~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
..+. ..|...|.+++|+|++++|++++.||.|++|+...
T Consensus 246 ~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 246 TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 2331 26788999999999999999999999999999874
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.98 E-value=2.3e-30 Score=261.80 Aligned_cols=225 Identities=17% Similarity=0.200 Sum_probs=197.7
Q ss_pred eEEeccCCCeEEEEeCCCCCC-----cceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 295 MICWNECDNLIRLKMSKELPA-----TPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~-----~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
+|++|+.|++|++|++..... ...+. +|...|++++|+|++++|++|+.|++|++||+.++ +.+.
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~---------~~~~ 101 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG---------ETYQ 101 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------EEEE
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC---------CeeE
Confidence 899999999999999864322 22333 89999999999999999999999999999999876 4567
Q ss_pred EeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCC------CCeEEEEeecCcC
Q psy10778 370 ILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSET------NGEIASVLQTTKT 443 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~------~~~i~s~s~~~~~ 443 (556)
.+.+|...|.+++|+|++.++++|+.||+|++||++ ++.+..+.+ | ...|.+++++|. +..+++++
T Consensus 102 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~-h-~~~v~~~~~~~~~~~~~~~~~l~s~~----- 173 (319)
T 3frx_A 102 RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLG-H-NDWVSQVRVVPNEKADDDSVTIISAG----- 173 (319)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECC-C-SSCEEEEEECCC------CCEEEEEE-----
T ss_pred EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEec-c-CCcEEEEEEccCCCCCCCccEEEEEe-----
Confidence 889999999999999999999999999999999997 567888888 8 899999999985 44789998
Q ss_pred CCCeEEEEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe
Q psy10778 444 GGSILRLHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS 521 (556)
Q Consensus 444 ~d~~I~iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 521 (556)
.|+.|++||++ ++....+ .|...|.+++|+ |+| ++|++|+.||.|++||+.+++.+..+. +...|.+++|+
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s--p~g---~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~s 246 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTAS--PDG---TLIASAGKDGEIMLWNLAAKKAMYTLS--AQDEVFSLAFS 246 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEEC--TTS---SEEEEEETTCEEEEEETTTTEEEEEEE--CCSCEEEEEEC
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEc--CCC---CEEEEEeCCCeEEEEECCCCcEEEEec--CCCcEEEEEEc
Confidence 89999999998 5655555 578899999999 899 899999999999999999999999997 35789999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 522 CDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 522 ~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
|++.+|++++.+ .+++|++....
T Consensus 247 p~~~~la~~~~~-~i~v~~~~~~~ 269 (319)
T 3frx_A 247 PNRYWLAAATAT-GIKVFSLDPQY 269 (319)
T ss_dssp SSSSEEEEEETT-EEEEEEETTEE
T ss_pred CCCCEEEEEcCC-CcEEEEeCcCe
Confidence 999999988755 59999987644
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.98 E-value=5.4e-30 Score=257.17 Aligned_cols=227 Identities=14% Similarity=0.114 Sum_probs=197.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.|++|++||..+++....+. +|.+.|++++|+|++++|++|+.||+|++||+..+. .....+.+|
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--------~~~~~~~~h 139 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--------ALEQTFEGH 139 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT--------EEEEEECCC
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc--------chhhhhccc
Confidence 89999999999999999988777776 899999999999999999999999999999987541 223568899
Q ss_pred CccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC--CCCeEEEEeecCcCCCCeEEEE
Q psy10778 375 SACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE--TNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 375 ~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp--~~~~i~s~s~~~~~~d~~I~iw 451 (556)
...|.+++|+| ++..+++|+.||+|++||++++.....+...| ...+..++++| ++.++++++ .|++|++|
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s-----~D~~i~iW 213 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITAS-----DDLTIKIW 213 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEE-----TTSEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEc-----CCCeEEEE
Confidence 99999999999 67899999999999999998877666654415 67899999987 677999999 89999999
Q ss_pred EeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC--EE
Q psy10778 452 TIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ--HL 527 (556)
Q Consensus 452 di~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~--~l 527 (556)
|++ ++++..+. |...|.+++|+ |++ ++|++|+.||.|++||+.+++.+..+. .|...+.+++++|++. ++
T Consensus 214 d~~~~~~~~~~~~h~~~v~~~~~~--p~~---~~l~s~s~Dg~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 214 DYQTKSCVATLEGHMSNVSFAVFH--PTL---PIIISGSEDGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRKNYI 287 (304)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEC--SSS---SEEEEEETTSCEEEEETTTCCEEEEEC-CSSSSEEEEEECTTCGGGCE
T ss_pred eCCCCccceeeCCCCCCEEEEEEC--CCC---CEEEEEcCCCeEEEEECCCCceeeecc-CCCccEEEEEECCCCCceEE
Confidence 998 77777775 77899999999 888 899999999999999999999999998 7889999999999885 57
Q ss_pred EEEcCCCcEEEEEcCC
Q psy10778 528 YASNTEGLVIIWESSS 543 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~~ 543 (556)
++|+.| .+.+|++.+
T Consensus 288 asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 288 ASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEEETT-EEEEEECC-
T ss_pred EEecCC-ceEEEEecc
Confidence 777655 577888765
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=1.4e-30 Score=270.03 Aligned_cols=232 Identities=19% Similarity=0.255 Sum_probs=198.5
Q ss_pred ceEEeccCCCeEEEEeCCCCC------CcceEcCCCCCceEEEEEcCC-CCEEEEEeCCCcEEEEEeeeccCcccccccC
Q psy10778 294 GMICWNECDNLIRLKMSKELP------ATPVIRPPLGATIATATTAPD-CHTLWLGLTSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~------~~~~~~~~h~~~V~~i~~s~d-g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
.++++|+.|+.+++|++.+.. .......+|.+.|.+++|+|+ +..|++|+.|++|++||+.++ +
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~---------~ 191 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG---------Q 191 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC---------C
T ss_pred CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC---------c
Confidence 389999999999999986432 111222389999999999997 457999999999999999865 2
Q ss_pred CCeEe-----eCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCC-CCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 367 PPTIL-----LGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWDIN-TIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 367 ~~~~l-----~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~-~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
.+..+ .+|...|.+++|++ ++.++++|+.||+|++||++ .++.++.+.+ | ...|.+++|+|++..|++++
T Consensus 192 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~l~s~s- 268 (380)
T 3iz6_a 192 RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG-H-EGDINSVKFFPDGQRFGTGS- 268 (380)
T ss_dssp EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC-C-SSCCCEEEECTTSSEEEEEC-
T ss_pred EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC-c-CCCeEEEEEecCCCeEEEEc-
Confidence 23333 68999999999987 78899999999999999998 4577888998 9 99999999999999999999
Q ss_pred cCcCCCCeEEEEEeC-CcEEEEeecC--------CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec--
Q psy10778 440 TTKTGGSILRLHTIN-AQLITSLASE--------LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN-- 508 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~-g~~i~~~~~~--------~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~-- 508 (556)
.|++|++||++ ++.+..+... ..+++++|+ |+| ++|++|+.||.|++||+..++.+..+.
T Consensus 269 ----~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~g---~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 339 (380)
T 3iz6_a 269 ----DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS--ISG---RLLFAGYSNGDCYVWDTLLAEMVLNLGTL 339 (380)
T ss_dssp ----SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC--SSS---SEEEEECTTSCEEEEETTTCCEEEEECCS
T ss_pred ----CCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC--CCC---CEEEEEECCCCEEEEECCCCceEEEEecc
Confidence 89999999998 7777666421 248999999 899 899999999999999999998887773
Q ss_pred -CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 509 -TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 509 -~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
.+|...|++++|+|+|++|++|+.||.|++|++...++
T Consensus 340 ~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 340 QNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp CSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred cCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 27899999999999999999999999999999987644
No 23
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.6e-30 Score=262.77 Aligned_cols=230 Identities=14% Similarity=0.144 Sum_probs=183.1
Q ss_pred eEEeccCCCeEEEEeCCCC-------CCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKEL-------PATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~-------~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+|++|+.|++|++|+.... +....+ .+|.+.|++++|+|++++|++|+.|++|++||+...... .+.
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~-----~~~ 145 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE-----YEC 145 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC-----CEE
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC-----eEE
Confidence 8999999999999998532 122233 379999999999999999999999999999998532111 123
Q ss_pred CeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC--eEEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcC
Q psy10778 368 PTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI--GYIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKT 443 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~--~~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~ 443 (556)
+..+.+|...|.+++|+|++.+|++|+.||+|++||+.++ +.+..+.+ | ...|.+++|+|+ +..+++++
T Consensus 146 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~~l~s~s----- 218 (330)
T 2hes_X 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG-H-EGTVWSSDFDKTEGVFRLCSGS----- 218 (330)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-C-SSCEEEEEECCSSSSCEEEEEE-----
T ss_pred EEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC-C-CCcEEEEEecCCCCeeEEEEEe-----
Confidence 4678899999999999999999999999999999999876 67888998 9 899999999998 66899998
Q ss_pred CCCeEEEEEeCC---------cEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe--EEEEecCC
Q psy10778 444 GGSILRLHTINA---------QLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA--HLLTLNTN 510 (556)
Q Consensus 444 ~d~~I~iwdi~g---------~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~--~~~~~~~~ 510 (556)
.|++|++||+++ .....+. |...|.+++|+ +++ +|++|+.||.|++||..+++ .......+
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s--~~~----~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG--FNG----LIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC--TTS----CEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc--CCC----EEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 899999999963 2333332 67899999999 664 79999999999999987774 34343236
Q ss_pred CCC-CeEEEEEec--CCCEEEEEcCCCcEEEEEcCC
Q psy10778 511 VAL-PVIAVTYSC--DSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 511 h~~-~V~~l~~s~--dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
|.. .|.+++|+| ++++|++|+.||.|++|++++
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 776 899999999 789999999999999999865
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=7e-30 Score=261.19 Aligned_cols=238 Identities=13% Similarity=0.141 Sum_probs=194.0
Q ss_pred ceEEeccCCCeEEEEeCCCCCC--cceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 294 GMICWNECDNLIRLKMSKELPA--TPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~--~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
.+|++|+.|+++++|+...+.. ...+. +|...|++++|+|++++|++|+.|++|++||+..... ...+..+
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~------~~~~~~~ 146 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE------YECVSVL 146 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC------EEEEEEE
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC------eEEEEEe
Confidence 3899999999999999876643 33333 7999999999999999999999999999999975411 1234678
Q ss_pred eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 372 LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
.+|...|.+++|+|++++|++|+.|++|++||+.+++ ...++.+ | ...|.+++|+|++.+|++++ .|++|+
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-h-~~~v~~l~~sp~g~~l~s~s-----~D~~v~ 219 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEG-H-ESTVWSLAFDPSGQRLASCS-----DDRTVR 219 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEE
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecC-C-CCceEEEEECCCCCEEEEEe-----CCCeEE
Confidence 8999999999999999999999999999999998875 4567888 9 89999999999999999999 899999
Q ss_pred EEEeC--C--------------cEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe--------E
Q psy10778 450 LHTIN--A--------------QLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA--------H 503 (556)
Q Consensus 450 iwdi~--g--------------~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~--------~ 503 (556)
+|+.. + +.+..+. |...|.+++|+ +++ ..|++++.|+.|++|+..... .
T Consensus 220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~~---~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~ 294 (345)
T 3fm0_A 220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC--QLT---GALATACGDDAIRVFQEDPNSDPQQPTFSL 294 (345)
T ss_dssp EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC--TTT---CCEEEEETTSCEEEEEECTTSCTTSCCEEE
T ss_pred EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe--cCC---CEEEEEeCCCeEEEEEeCCCCCcceeeEEE
Confidence 99973 1 1233332 56789999999 888 799999999999999976432 1
Q ss_pred EEEecCCCCCCeEEEEEecCC-CEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 504 LLTLNTNVALPVIAVTYSCDS-QHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 504 ~~~~~~~h~~~V~~l~~s~dg-~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
......+|...|++++|+|++ .+|++|+.||.|++|++.++++...+
T Consensus 295 ~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 295 TAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp EEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred EeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 222223789999999999998 59999999999999999987765443
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=4.4e-30 Score=267.48 Aligned_cols=233 Identities=19% Similarity=0.222 Sum_probs=199.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCC-----------------CCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeecc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPP-----------------LGATIATATTAPDCHTLWLGLTSGNILVYEYELNA 357 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~-----------------h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~ 357 (556)
++++|+ |+.+++|+..+++....+... +...|++++|+|+|++|++|+.||+|++||+..+
T Consensus 78 ~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~- 155 (393)
T 1erj_A 78 YLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR- 155 (393)
T ss_dssp EEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTT-
T ss_pred EEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC-
Confidence 777776 789999999888766554311 1224999999999999999999999999998765
Q ss_pred CcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC-CCCeEEE
Q psy10778 358 STNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE-TNGEIAS 436 (556)
Q Consensus 358 ~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s 436 (556)
+.+..+.+|...|++++|+|+++.|++|+.||+|++||+++++....+.. ...+.+++++| ++.++++
T Consensus 156 --------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 156 --------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI---EDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp --------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSTTCCEEEE
T ss_pred --------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc---CCCcEEEEEECCCCCEEEE
Confidence 45578899999999999999999999999999999999999998888876 57899999999 8899999
Q ss_pred EeecCcCCCCeEEEEEeC-CcEEEEe--------ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC------
Q psy10778 437 VLQTTKTGGSILRLHTIN-AQLITSL--------ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL------ 501 (556)
Q Consensus 437 ~s~~~~~~d~~I~iwdi~-g~~i~~~--------~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~------ 501 (556)
++ .|+.|++||++ +..+..+ .|...|.+++|+ |+| ++|++|+.||.|++||+.+.
T Consensus 225 ~s-----~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~g---~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 225 GS-----LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT--RDG---QSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp EE-----TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC--TTS---SEEEEEETTSEEEEEEC---------
T ss_pred Ec-----CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC--CCC---CEEEEEeCCCEEEEEECCCCCCcccc
Confidence 99 89999999997 6666554 356789999999 899 89999999999999998753
Q ss_pred ------eEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 502 ------AHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 502 ------~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.+...+. +|...|.+++|++++.+|++|+.||.|++||+.+++.+..+.
T Consensus 295 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 295 KTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp ------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 3445565 789999999999999999999999999999999877665554
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=8.2e-30 Score=280.99 Aligned_cols=228 Identities=16% Similarity=0.232 Sum_probs=199.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCc--ceEcCCCCCceEEEEEcCCCCEEEEEeCC----CcEEEEEeeeccCcccccccCCC
Q psy10778 295 MICWNECDNLIRLKMSKELPAT--PVIRPPLGATIATATTAPDCHTLWLGLTS----GNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~--~~~~~~h~~~V~~i~~s~dg~~l~tgs~D----g~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
+|++|+.||+|+|||..+++.. ..+ .+|.+.|.+++|+|+|+.|++++.+ +.|++||. + +..
T Consensus 73 ~lasg~~d~~v~lWd~~~~~~~~~~~~-~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~---------~~~ 140 (611)
T 1nr0_A 73 YCASGDVHGNVRIWDTTQTTHILKTTI-PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--G---------TSN 140 (611)
T ss_dssp EEEEEETTSEEEEEESSSTTCCEEEEE-ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--C---------CBC
T ss_pred EEEEEeCCCCEEEeECCCCcceeeEee-cccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--C---------CCc
Confidence 8999999999999999754432 233 3799999999999999999998865 47888873 2 334
Q ss_pred eEeeCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCe
Q psy10778 369 TILLGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~ 447 (556)
..+.+|...|++++|+|++. .|++|+.|++|++||..+++.+.++.+ | ...|.+++|+|++..|++++ .|++
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H-~~~V~~v~fspdg~~las~s-----~D~~ 213 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-H-TKFVHSVRYNPDGSLFASTG-----GDGT 213 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSC
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-c-cCceEEEEECCCCCEEEEEE-----CCCc
Confidence 67889999999999999987 699999999999999999999999999 9 99999999999999999999 8999
Q ss_pred EEEEEeC-CcEEEEe--------ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec----------
Q psy10778 448 LRLHTIN-AQLITSL--------ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN---------- 508 (556)
Q Consensus 448 I~iwdi~-g~~i~~~--------~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~---------- 508 (556)
|++||+. ++.+..+ .|...|.+++|+ |+| ++|++|+.|++|++||+.+++.+..+.
T Consensus 214 i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s--pdg---~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 214 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS--PDG---TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC--TTS---SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred EEEEECCCCcEeeeeccccccccccCCCEEEEEEC--CCC---CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 9999986 7777776 477899999999 899 899999999999999998877654432
Q ss_pred --------------------------------CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 509 --------------------------------TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 509 --------------------------------~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
.+|...|++++|+|+|++|++++.||.|++||+.++..
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 16889999999999999999999999999999988654
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.1e-29 Score=259.29 Aligned_cols=228 Identities=15% Similarity=0.155 Sum_probs=192.3
Q ss_pred eEEeccCCCeEEEEeCCCCCC-------cceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELPA-------TPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~-------~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+|++|+.|++|++|++.+.+. ...+ .+|...|++++|+|++.++++|+.|++|++||+.++ +.
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~---------~~ 110 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQNGYFGIPHKAL-TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTG---------TT 110 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCCSSBSEEEEEEE-CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSS---------CE
T ss_pred EEEEEcCCCEEEEEECCcCCcccccccccchh-ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC---------cE
Confidence 899999999999999875432 2223 389999999999999999999999999999999876 55
Q ss_pred CeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeC---CCCCCCCeeEEEEeCCC----------CeE
Q psy10778 368 PTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIP---CVDPNTPVSHVTMSETN----------GEI 434 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~---~~h~~~~V~~l~~sp~~----------~~i 434 (556)
+..+.+|...|.+++|+|+++.|++|+.||+|++||+.. ....... . | ...|.+++|+|++ ..+
T Consensus 111 ~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 111 YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKEN-H-SDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTS-C-SSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccC-C-CceeeeeeeccccccccccCCCCCEE
Confidence 678899999999999999999999999999999999984 3343333 4 6 7889999999987 689
Q ss_pred EEEeecCcCCCCeEEEEEeCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-CCeEEEEecCCCC
Q psy10778 435 ASVLQTTKTGGSILRLHTINAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-KLAHLLTLNTNVA 512 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-~~~~~~~~~~~h~ 512 (556)
++++ .|+.|++||.+++....+ .|...|.+++|+ |+| ++|++|+.||.|++||+. .......+. +.
T Consensus 188 ~s~~-----~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s--~~g---~~l~sgs~dg~v~iwd~~~~~~~~~~~~--~~ 255 (343)
T 2xzm_R 188 ASVG-----WDGRLKVWNTNFQIRYTFKAHESNVNHLSIS--PNG---KYIATGGKDKKLLIWDILNLTYPQREFD--AG 255 (343)
T ss_dssp EEEE-----TTSEEEEEETTTEEEEEEECCSSCEEEEEEC--TTS---SEEEEEETTCEEEEEESSCCSSCSEEEE--CS
T ss_pred EEEc-----CCCEEEEEcCCCceeEEEcCccccceEEEEC--CCC---CEEEEEcCCCeEEEEECCCCcccceeec--CC
Confidence 9998 899999999877776666 478899999999 899 899999999999999994 344445554 45
Q ss_pred CCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 513 LPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 513 ~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
..|.+++|+|++.+++++ .|+.|++|++.+++..+
T Consensus 256 ~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 256 STINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS
T ss_pred CcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc
Confidence 679999999999887655 58889999998866544
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=9.8e-31 Score=271.17 Aligned_cols=241 Identities=19% Similarity=0.256 Sum_probs=206.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+|++|+.||+|++||..+++....+. .|...|.+++|+|+|++|++|+.|+.+++|++....... ........+.+|
T Consensus 80 ~l~s~s~D~~v~iWd~~~~~~~~~~~-~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~--~~~~~~~~~~gh 156 (380)
T 3iz6_a 80 WIVSASQDGRLIVWNALTSQKTHAIK-LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRD--GNMPVSRVLTGH 156 (380)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEE-CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCC--CSSTTCCBCCCC
T ss_pred EEEEEeCCCeEEEEECCCCccceEEe-cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcccc--CCccceeeccCC
Confidence 89999999999999999887777766 799999999999999999999999999999997542111 112345678899
Q ss_pred CccEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEe-----CCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCe
Q psy10778 375 SACVTDLYLCAGF-SVAVSSSEDGTCLLWDINTIGYIREI-----PCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 375 ~~~V~~l~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l-----~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~ 447 (556)
.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+ | ...|.++++++ ++..+++++ .|+.
T Consensus 157 ~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~l~sgs-----~D~~ 229 (380)
T 3iz6_a 157 KGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG-H-TADVLSLSINSLNANMFISGS-----CDTT 229 (380)
T ss_dssp SSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS-C-CSCEEEEEECSSSCCEEEEEE-----TTSC
T ss_pred CcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC-C-ccCeEEEEeecCCCCEEEEEE-----CCCe
Confidence 9999999999974 57999999999999999999988877 55 7 78999999987 788999999 8999
Q ss_pred EEEEEeC--CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC------CCCCeEEE
Q psy10778 448 LRLHTIN--AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN------VALPVIAV 518 (556)
Q Consensus 448 I~iwdi~--g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~------h~~~V~~l 518 (556)
|++||++ ++.+..+ .|...|.+++|+ |++ ++|++|+.||+|++||+++++.+..+... +...|+++
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~~v~~v~~~--p~~---~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 304 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEGDINSVKFF--PDG---QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSV 304 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSSCCCEEEEC--TTS---SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEE
T ss_pred EEEEECCCCCcceEEECCcCCCeEEEEEe--cCC---CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEE
Confidence 9999996 4555555 478899999999 899 89999999999999999999998887631 12348999
Q ss_pred EEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 519 TYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 519 ~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
+|+|+|++|++|+.||.|++||+.+++....+
T Consensus 305 ~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 305 AFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 99999999999999999999999876655443
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.4e-29 Score=256.06 Aligned_cols=238 Identities=18% Similarity=0.206 Sum_probs=197.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCc-----ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccc-------
Q psy10778 295 MICWNECDNLIRLKMSKELPAT-----PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKI------- 362 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~-----~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~------- 362 (556)
+|++|+.||+|++|++.+.+.. ..+ .+|...|++++|+|++++|++|+.|+.|++|+..........
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 131 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV 131 (340)
T ss_dssp EEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCce
Confidence 8999999999999998765432 223 379999999999999999999999999999987543210000
Q ss_pred ---------------------c--c----cCCCeEeeCCCccEEEEEEccCC--CEEEEEcCCCcEEEEeCCCCeEEEEe
Q psy10778 363 ---------------------E--F----CKPPTILLGHSACVTDLYLCAGF--SVAVSSSEDGTCLLWDINTIGYIREI 413 (556)
Q Consensus 363 ---------------------~--~----~~~~~~l~~h~~~V~~l~~s~~~--~~l~sgs~Dg~I~iwdl~~~~~v~~l 413 (556)
. . ........+|...+.+++|++++ .++++++.|+.|++||+.+++.+..+
T Consensus 132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~ 211 (340)
T 4aow_A 132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 211 (340)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe
Confidence 0 0 01112345788999999998865 47899999999999999999999999
Q ss_pred CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCe
Q psy10778 414 PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGT 492 (556)
Q Consensus 414 ~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~ 492 (556)
.. | ...|++++|+|++.+|++++ .|+.|++||++ ++.+..+.+...+.+++|+ |++ .+++++.|+.
T Consensus 212 ~~-h-~~~v~~~~~s~~~~~l~s~s-----~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~--~~~----~~~~~~~d~~ 278 (340)
T 4aow_A 212 IG-H-TGYLNTVTVSPDGSLCASGG-----KDGQAMLWDLNEGKHLYTLDGGDIINALCFS--PNR----YWLCAATGPS 278 (340)
T ss_dssp CC-C-SSCEEEEEECTTSSEEEEEE-----TTCEEEEEETTTTEEEEEEECSSCEEEEEEC--SSS----SEEEEEETTE
T ss_pred cC-C-CCcEEEEEECCCCCEEEEEe-----CCCeEEEEEeccCceeeeecCCceEEeeecC--CCC----ceeeccCCCE
Confidence 99 9 89999999999999999999 89999999998 7788888888999999999 776 4666777999
Q ss_pred EEEEeCCCCeEEEEecC--------CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 493 IQLWSGYKLAHLLTLNT--------NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 493 I~iwd~~~~~~~~~~~~--------~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
|++||+..+..+..+.. +|...|++++|+|+|++|++|+.||.|+|||++++.+
T Consensus 279 i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 279 IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred EEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 99999998887766542 5788999999999999999999999999999998753
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1.7e-29 Score=275.13 Aligned_cols=220 Identities=22% Similarity=0.325 Sum_probs=200.1
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.++++|+.||.|++|+.. ++....+. +|...|++++|+|++++|++|+.|+.|++|+... +.+..+.+
T Consensus 357 ~~l~~~~~dg~v~~~~~~-~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~----------~~~~~~~~ 424 (577)
T 2ymu_A 357 QTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG----------QLLQTLTG 424 (577)
T ss_dssp SEEEEEETTSEEEEEETT-CCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTC----------CEEEEEEC
T ss_pred CEEEEEeCCCEEEEEcCC-CCEEEEec-CCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCC----------CEEEEecC
Confidence 388999999999999964 45555554 7999999999999999999999999999999532 34578899
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
|...|++++|+|+++++++++.|++|++||+. ++.+..+.. | ...|.+++|+|++++|++++ .|+.|++||.
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~-~-~~~v~~~~~spd~~~las~~-----~d~~i~iw~~ 496 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTG-H-SSSVRGVAFSPDGQTIASAS-----DDKTVKLWNR 496 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEEC-C-SSCEEEEEECTTSCEEEEEE-----TTSEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcC-C-CCCEEEEEEcCCCCEEEEEe-----CCCEEEEEcC
Confidence 99999999999999999999999999999974 678888888 8 89999999999999999999 8999999999
Q ss_pred CCcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcC
Q psy10778 454 NAQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNT 532 (556)
Q Consensus 454 ~g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~ 532 (556)
+++++..+. |...|++++|+ |+| ++|++++.||.|++||. +++.+..+. +|...|++++|+|||++|++++.
T Consensus 497 ~~~~~~~~~~h~~~v~~l~~s--~dg---~~l~s~~~dg~v~lwd~-~~~~~~~~~-~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 497 NGQLLQTLTGHSSSVRGVAFS--PDG---QTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEEC--TTS---SCEEEEETTSEEEEECT-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEET
T ss_pred CCCEEEEEeCCCCCEEEEEEc--CCC---CEEEEEECcCEEEEEeC-CCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 998888875 67899999999 899 89999999999999995 788899998 89999999999999999999999
Q ss_pred CCcEEEEE
Q psy10778 533 EGLVIIWE 540 (556)
Q Consensus 533 Dg~V~vwd 540 (556)
||.|++||
T Consensus 570 D~~i~~Wd 577 (577)
T 2ymu_A 570 DKTVKLWN 577 (577)
T ss_dssp TSCEEEEC
T ss_pred CCEEEEeC
Confidence 99999997
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4.5e-29 Score=251.42 Aligned_cols=231 Identities=12% Similarity=0.190 Sum_probs=204.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc----CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR----PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~----~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
++++|+ ||.|++|+..++.....+. ..|...|++++|+|++++|++|+.||.|++|++..+. ......
T Consensus 65 ~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-------~~~~~~ 136 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-------PRIKAE 136 (337)
T ss_dssp EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---------EEEEE
T ss_pred EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-------cceeee
Confidence 777887 9999999998764332221 2688999999999999999999999999999998651 013467
Q ss_pred eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEE
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRL 450 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~i 450 (556)
+.+|...|.+++|+|+++.+++++.||.|++||+++++.+..+.. | ...|.+++|+|++..+++++ .++.|++
T Consensus 137 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~-----~dg~i~~ 209 (337)
T 1gxr_A 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-H-TDGASCIDISNDGTKLWTGG-----LDNTVRS 209 (337)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSEEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-c-cCceEEEEECCCCCEEEEEe-----cCCcEEE
Confidence 788999999999999999999999999999999999999999998 8 89999999999999999999 8999999
Q ss_pred EEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 451 HTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 451 wdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
||++ ++.+....+...+.+++|+ |++ +++++++.+|.|++||+.+++.. .+. .|...|++++|+|++++|++
T Consensus 210 ~d~~~~~~~~~~~~~~~v~~~~~s--~~~---~~l~~~~~~~~i~~~~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 210 WDLREGRQLQQHDFTSQIFSLGYC--PTG---EWLAVGMESSNVEVLHVNKPDKY-QLH-LHESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTSSCEE-EEC-CCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCceEeeecCCCceEEEEEC--CCC---CEEEEEcCCCcEEEEECCCCCeE-EEc-CCccceeEEEECCCCCEEEE
Confidence 9997 7788888889999999999 898 89999999999999999888765 444 68899999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCc
Q psy10778 530 SNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~ 547 (556)
++.||.|++|++.+++..
T Consensus 283 ~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EETTSEEEEEETTTCCEE
T ss_pred ecCCCcEEEEECCCCeEE
Confidence 999999999999987655
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=3.5e-30 Score=264.96 Aligned_cols=236 Identities=16% Similarity=0.137 Sum_probs=190.5
Q ss_pred eEEeccC------CCeEEEEeCCCCCCcce---EcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccccccc
Q psy10778 295 MICWNEC------DNLIRLKMSKELPATPV---IRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFC 365 (556)
Q Consensus 295 ~l~~gs~------Dg~I~lw~~~~~~~~~~---~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~ 365 (556)
+|++|+. |+.|++|+..++..... ...+|...|++++|+|+++ +++++.||+|+|||+..+....
T Consensus 56 ~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~----- 129 (357)
T 4g56_B 56 LLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLL----- 129 (357)
T ss_dssp EEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------C-----
T ss_pred EEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeE-----
Confidence 5666665 78999999876643222 2226889999999999975 5677889999999998752111
Q ss_pred CCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCC
Q psy10778 366 KPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTG 444 (556)
Q Consensus 366 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~ 444 (556)
.......+|.+.|++++|+|++++|++|+.||+|++||+++++.+..+.. | ...|.+++|++++. .+++++ .
T Consensus 130 ~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h-~~~v~~v~~s~~~~~~~~s~~-----~ 202 (357)
T 4g56_B 130 VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-H-SSEVNCVAACPGKDTIFLSCG-----E 202 (357)
T ss_dssp CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-C-SSCEEEEEECTTCSSCEEEEE-----T
T ss_pred EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-C-CCCEEEEEEccCCCceeeeec-----c
Confidence 12245568999999999999999999999999999999999999999999 9 99999999999875 677887 8
Q ss_pred CCeEEEEEeC-CcEEEEe---ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEE
Q psy10778 445 GSILRLHTIN-AQLITSL---ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTY 520 (556)
Q Consensus 445 d~~I~iwdi~-g~~i~~~---~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 520 (556)
|+.|++||++ ++.+... .+...+.+++|+ |++. .+|++|+.|+.|++||+++++.+..+. +|...|++++|
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s--p~~~--~~la~g~~d~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~ 277 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFCASDTIPTSVTWH--PEKD--DTFACGDETGNVSLVNIKNPDSAQTSA-VHSQNITGLAY 277 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC--TTST--TEEEEEESSSCEEEEESSCGGGCEEEC-CCSSCEEEEEE
T ss_pred CCceEEEECCCCceeeeeeeccccccccchhhh--hccc--ceEEEeecccceeEEECCCCcEeEEEe-ccceeEEEEEE
Confidence 9999999997 5555444 245789999999 6642 689999999999999999999999998 89999999999
Q ss_pred ecCC-CEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 521 SCDS-QHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 521 s~dg-~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
+|++ ++|++|+.||.|+|||+++++.+.
T Consensus 278 sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 278 SYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred cCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 9987 679999999999999998876543
No 33
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=2.4e-29 Score=264.03 Aligned_cols=235 Identities=15% Similarity=0.225 Sum_probs=190.9
Q ss_pred cCCcceEEeccCCCeEEEEeCCCCCCcceEcC-CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 290 GAGAGMICWNECDNLIRLKMSKELPATPVIRP-PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 290 ~~~~~~l~~gs~Dg~I~lw~~~~~~~~~~~~~-~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
|+...+||.|. |++|+|||..+++....+.. +|...|++++|+|+|++|++|+.||+|++||+.++ +.+
T Consensus 113 wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~---------~~~ 182 (420)
T 4gga_A 113 WSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ---------KRL 182 (420)
T ss_dssp ECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------EEE
T ss_pred ECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---------cEE
Confidence 33344888875 99999999999988777654 57889999999999999999999999999999876 556
Q ss_pred eEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC-eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecC------
Q psy10778 369 TILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI-GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTT------ 441 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~-~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~------ 441 (556)
..+.+|...+.+++++ +..+++|+.|+.+++||.... ..+..+.. | ...+..+.++|++..+++++.++
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~-h-~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSG-H-SQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC-C-SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecc-c-ccceeeeeecCCCCeeeeeeccccceEEe
Confidence 8889999999998875 679999999999999998753 33444444 4 44555555555555444444222
Q ss_pred --------------------------------------cCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcce
Q psy10778 442 --------------------------------------KTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQN 482 (556)
Q Consensus 442 --------------------------------------~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~ 482 (556)
++.|++|++||++ ++.+..+.....+.++.|+ +++ +
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~--~~~---~ 333 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWS--PHY---K 333 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEE--TTT---T
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeec--CCC---C
Confidence 1267888899887 7777777788889999999 777 5
Q ss_pred EEEEEe--CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 483 VIVTGH--SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 483 ~l~tg~--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.+++++ .||.|++||+.+++++..+. +|...|++++|+|||++|++|+.||+|++||+.+.
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 666654 78999999999999999998 89999999999999999999999999999999764
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.3e-28 Score=248.03 Aligned_cols=223 Identities=13% Similarity=0.141 Sum_probs=199.4
Q ss_pred ceEEeccCCCeEEEEeCCCCCC--cceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 294 GMICWNECDNLIRLKMSKELPA--TPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~--~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
.++++|+.||.|++|+..+++. ...+. .|...|++++|+|+++++++|+.||.|++||+..+ +.+..+
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~---------~~~~~~ 179 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---------TLVRQF 179 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---------EEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---------ceeeee
Confidence 3788999999999999988763 23333 68899999999999999999999999999998765 455778
Q ss_pred eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 372 LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.+|...|.+++|+|+++.+++++.||.|++||+++++.+..+.. ...+.+++|+|++..+++++ .++.|++|
T Consensus 180 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~-----~~~~i~~~ 251 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF---TSQIFSLGYCPTGEWLAVGM-----ESSNVEVL 251 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECTTSSEEEEEE-----TTSCEEEE
T ss_pred ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC---CCceEEEEECCCCCEEEEEc-----CCCcEEEE
Confidence 89999999999999999999999999999999999998888875 78899999999999999998 89999999
Q ss_pred EeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10778 452 TIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 452 di~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sg 530 (556)
|++ ++......+...+.+++|+ |++ ++|++++.||.|++||+.+++.+.... |...|++++|+|++++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~ 324 (337)
T 1gxr_A 252 HVNKPDKYQLHLHESCVLSLKFA--YCG---KWFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDISVDDKYIVTG 324 (337)
T ss_dssp ETTSSCEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEE
T ss_pred ECCCCCeEEEcCCccceeEEEEC--CCC---CEEEEecCCCcEEEEECCCCeEEEEec--CCCcEEEEEECCCCCEEEEe
Confidence 998 5555555678899999999 898 899999999999999999999886664 78999999999999999999
Q ss_pred cCCCcEEEEEc
Q psy10778 531 NTEGLVIIWES 541 (556)
Q Consensus 531 s~Dg~V~vwdl 541 (556)
+.||.|++|++
T Consensus 325 ~~dg~i~iw~~ 335 (337)
T 1gxr_A 325 SGDKKATVYEV 335 (337)
T ss_dssp ETTSCEEEEEE
T ss_pred cCCCeEEEEEE
Confidence 99999999997
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=9.7e-30 Score=259.70 Aligned_cols=228 Identities=13% Similarity=0.149 Sum_probs=191.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.|++|++||+.+++....+. +|...|.+++|+|++++|++|+.|++|++||+.... . .......+|
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~----~---~~~~~~~~~ 161 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC----K---FSSAEKENH 161 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE----E---EECCTTTSC
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc----e---eeeecccCC
Confidence 88999999999999999888777665 899999999999999999999999999999986320 0 001112378
Q ss_pred CccEEEEEEccCC----------CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 375 SACVTDLYLCAGF----------SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 375 ~~~V~~l~~s~~~----------~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
...|.+++|+|++ .++++++.||+|++||. +.+....+.. | ...|.+++|+|++.+|++++ .
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~-h-~~~v~~~~~s~~g~~l~sgs-----~ 233 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA-H-ESNVNHLSISPNGKYIATGG-----K 233 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC-C-SSCEEEEEECTTSSEEEEEE-----T
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC-c-cccceEEEECCCCCEEEEEc-----C
Confidence 9999999999987 78999999999999994 4677778888 8 89999999999999999999 8
Q ss_pred CCeEEEEEeC--CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEE--Eec----------CC
Q psy10778 445 GSILRLHTIN--AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLL--TLN----------TN 510 (556)
Q Consensus 445 d~~I~iwdi~--g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~--~~~----------~~ 510 (556)
|+.|++||+. +.....+.+...|.+++|+ |++ .++++| .|+.|++||+.+++... .+. .+
T Consensus 234 dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~s--p~~---~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREFDAGSTINQIAFN--PKL---QWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKG 307 (343)
T ss_dssp TCEEEEEESSCCSSCSEEEECSSCEEEEEEC--SSS---CEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCC
T ss_pred CCeEEEEECCCCcccceeecCCCcEEEEEEC--CCC---CEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcC
Confidence 9999999994 4455555567789999999 888 677655 57889999998765433 332 14
Q ss_pred CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 511 VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 511 h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
|...|++++|+|+|++|++|+.||.|++|+++++
T Consensus 308 ~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 7788999999999999999999999999998764
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.1e-29 Score=265.35 Aligned_cols=229 Identities=16% Similarity=0.153 Sum_probs=196.1
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.++++|+.||.|++|+..+++....+. +|.+.|++++|+|++++|++|+.||+|++||+..+ +.+..+.+
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---------~~~~~~~~ 179 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG---------SNPRTLIG 179 (420)
T ss_dssp CEEEEEETTSCEEEECTTSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------CCCEEEEC
T ss_pred CEEEEEECCCCEEEEeCCCcceeeecc-cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC---------cCceEEcC
Confidence 389999999999999998776554443 79999999999999999999999999999999876 56788999
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCC--CCCeeE---------------------EEEeCC
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDP--NTPVSH---------------------VTMSET 430 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~--~~~V~~---------------------l~~sp~ 430 (556)
|...|++++|+|+++.|++++.||+|++||+++++.+..+.. +. ...+.+ ++|+|+
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR-KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY 258 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB-TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec-CCCCCCCccEEEEecCCcceeeecccCcccceEEcCC
Confidence 999999999999999999999999999999999999988864 20 334444 445788
Q ss_pred CCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee--cCCCeEEEEEeeCCCCCcce-EEEEEeCCCeEEEEeCCCCeE-EE
Q psy10778 431 NGEIASVLQTTKTGGSILRLHTIN-AQLITSLA--SELRITSVTFSNAPEGVSQN-VIVTGHSDGTIQLWSGYKLAH-LL 505 (556)
Q Consensus 431 ~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~--~~~~i~~i~~s~~pdg~~~~-~l~tg~~dg~I~iwd~~~~~~-~~ 505 (556)
+..+++++ .++.|++||++ ++.+..+. +...+.+++|+ |++ . +|++|+.||.|++||+.+++. +.
T Consensus 259 ~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~~l~~g~~dg~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 259 GKYVIAGH-----VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVD--GNN---ANYIYAGYENGMLAQWDLRSPECPVG 328 (420)
T ss_dssp TEEEEEEE-----TTSCEEEEETTTCCEEEEECCTTSSCEEEEEEC--SSC---TTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred CCEEEEEc-----CCCeEEEEECCCCceeEEcccccCCCceeEEEe--CCC---CCEEEEEeCCCeEEEEEcCCCcCchh
Confidence 89999999 89999999997 66666553 56899999999 888 6 999999999999999998753 66
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 506 TLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 506 ~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.+...|...|+++.+ +++++|++++.||.|++|++.+.
T Consensus 329 ~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 329 EFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred hhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 666346788888855 57889999999999999999874
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=4.3e-29 Score=250.77 Aligned_cols=228 Identities=18% Similarity=0.245 Sum_probs=199.6
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.++++|+.||.|++|+..+++....+. +|...|.+++|+|++++|++|+.||+|++||+..+ +.+..+..
T Consensus 78 ~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---------~~~~~~~~ 147 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------KCLKTLPA 147 (312)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---------CEEEEECC
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---------EEEEEecC
Confidence 389999999999999999988777776 79999999999999999999999999999999865 45678889
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
|..+|.+++|+|+++++++|+.||.|++||+++++.+..+...+ ...+..++|+|++.++++++ .++.|++||+
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-----~d~~i~iwd~ 221 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAAT-----LDNTLKLWDY 221 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEE-----TTTEEEEEET
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEc-----CCCeEEEEEC
Confidence 99999999999999999999999999999999998888775424 67899999999999999999 8999999999
Q ss_pred C-CcEEEEee-cCCC--eEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 454 N-AQLITSLA-SELR--ITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 454 ~-g~~i~~~~-~~~~--i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
+ ++.+..+. +... .....++. +++ .+|++|+.||.|++||+.+++.+..+. +|...|.+++|+|++..+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 222 SKGKCLKTYTGHKNEKYCIFANFSV-TGG---KWIVSGSEDNLVYIWNLQTKEIVQKLQ-GHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp TTTEEEEEECSSCCSSSCCCEEEEC-SSS---CEEEECCTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECSSSSEEEE
T ss_pred CCCcEEEEEEecCCceEEEEEEEEe-CCC---cEEEEECCCCEEEEEECCCchhhhhhh-ccCCcEEEEeecCcCCceEE
Confidence 7 77777664 3322 22334442 456 799999999999999999999999998 89999999999999999999
Q ss_pred Ec--CCCcEEEEEcC
Q psy10778 530 SN--TEGLVIIWESS 542 (556)
Q Consensus 530 gs--~Dg~V~vwdl~ 542 (556)
++ .||.|++|+..
T Consensus 297 ~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 297 AALENDKTIKLWKSD 311 (312)
T ss_dssp EECTTTCCEEEEECC
T ss_pred EEccCCccEEEecCC
Confidence 86 69999999864
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=4.6e-29 Score=249.75 Aligned_cols=244 Identities=14% Similarity=0.197 Sum_probs=198.4
Q ss_pred cCCcceEEeccCCCeEEEEeCCCCCCcceEcC-CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccc------
Q psy10778 290 GAGAGMICWNECDNLIRLKMSKELPATPVIRP-PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKI------ 362 (556)
Q Consensus 290 ~~~~~~l~~gs~Dg~I~lw~~~~~~~~~~~~~-~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~------ 362 (556)
|+..++||.|. |++|+|||.++++....+.. +|...|++++|+|++++|++|+.||+|++|++.++......
T Consensus 33 WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~ 111 (318)
T 4ggc_A 33 WSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR 111 (318)
T ss_dssp ECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce
Confidence 33334788764 99999999999988877653 57889999999999999999999999999998654210000
Q ss_pred --------------------------cccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeE----EEE
Q psy10778 363 --------------------------EFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGY----IRE 412 (556)
Q Consensus 363 --------------------------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~----v~~ 412 (556)
.....+..+.+|...+.++.++++++++++++.||+|++||+++++. ...
T Consensus 112 ~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 191 (318)
T 4ggc_A 112 VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 191 (318)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEE
T ss_pred EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceee
Confidence 00123456788999999999999999999999999999999987642 344
Q ss_pred eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEE--eC
Q psy10778 413 IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTG--HS 489 (556)
Q Consensus 413 l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg--~~ 489 (556)
... + .+.|.++++++++..++..... +.++.|++||.+ +.......+...+..++|+ +++ +.++++ +.
T Consensus 192 ~~~-~-~~~v~~~~~~~~~~~~~~~~~~--~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~--~~~---~~~~~~sg~~ 262 (318)
T 4ggc_A 192 FTQ-H-QGAVKAVAWCPWQSNVLATGGG--TSDRHIRIWNVCSGACLSAVDAHSQVCSILWS--PHY---KELISGHGFA 262 (318)
T ss_dssp ECC-C-CSCEEEEEECTTSTTEEEEEEC--TTTCEEEEEETTTCCEEEEEECSSCEEEEEEE--TTT---TEEEEEECTT
T ss_pred ecc-c-CCceEEEEecCCCCcEEEEEec--CCCCEEEEEecccccccccccceeeeeeeeec--ccc---cceEEEEEcC
Confidence 555 6 7889999999987766533211 178999999998 6666777788899999999 776 555554 47
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 490 DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 490 dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
||.|++||+.+++++.++. +|...|++++|+|+|++|++|+.||+|+|||+.+.
T Consensus 263 d~~i~iwd~~~~~~~~~l~-gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 263 QNQLVIWKYPTMAKVAELK-GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TCCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999999999999999998 89999999999999999999999999999999764
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=2.6e-29 Score=277.00 Aligned_cols=233 Identities=16% Similarity=0.197 Sum_probs=201.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++++ ++.|++|+..+++....+. +|.+.|++++|+|+|++||+|+.||+|+|||+..+.. .....+.+|
T Consensus 32 ~l~~~~-~~~v~l~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~-------~~~~~~~~~ 102 (611)
T 1nr0_A 32 KIQYCN-GTSVYTVPVGSLTDTEIYT-EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH-------ILKTTIPVF 102 (611)
T ss_dssp EEEEEE-TTEEEEEETTCSSCCEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC-------CEEEEEECS
T ss_pred EEEeCC-CCEEEEecCCCcccCeEec-CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc-------eeeEeeccc
Confidence 677766 5799999998877777765 8999999999999999999999999999999864310 223567899
Q ss_pred CccEEEEEEccCCCEEEEEcCC----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSED----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTGGSILR 449 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~D----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I~ 449 (556)
.+.|.+++|+|+++.|++++.+ +.|++|| .++....+.+ | ...|.+++|+|++. .|++++ .|++|+
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~g-h-~~~v~~v~f~p~~~~~l~s~s-----~D~~v~ 173 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTG-Q-ARAMNSVDFKPSRPFRIISGS-----DDNTVA 173 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCC-C-SSCEEEEEECSSSSCEEEEEE-----TTSCEE
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecC-C-CCCceEEEECCCCCeEEEEEe-----CCCeEE
Confidence 9999999999999999988865 4677787 4566777888 9 89999999999987 588888 899999
Q ss_pred EEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC------CCCCCeEEEEEe
Q psy10778 450 LHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT------NVALPVIAVTYS 521 (556)
Q Consensus 450 iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~s 521 (556)
+||.. ++.+..+ .|...|.+++|+ |+| ++|++|+.||+|++||+.+++.+..+.. +|...|.+++|+
T Consensus 174 lwd~~~~~~~~~l~~H~~~V~~v~fs--pdg---~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s 248 (611)
T 1nr0_A 174 IFEGPPFKFKSTFGEHTKFVHSVRYN--PDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 248 (611)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred EEECCCCeEeeeeccccCceEEEEEC--CCC---CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC
Confidence 99987 6666666 477899999999 899 8999999999999999999999888843 689999999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 522 CDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 522 ~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
|++++|++++.||.|++||+.+++...++
T Consensus 249 pdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 249 PDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 99999999999999999999987665444
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.4e-29 Score=251.48 Aligned_cols=248 Identities=13% Similarity=0.105 Sum_probs=200.4
Q ss_pred eEEeccCCCeEEEEeCCCCCC----cceEcCCCCCceEEEEEcC--CCCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 295 MICWNECDNLIRLKMSKELPA----TPVIRPPLGATIATATTAP--DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~----~~~~~~~h~~~V~~i~~s~--dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
+|++|+.||.|++|++.++.. ...+. +|...|++++|+| ++++|++|+.||+|++||+..+.........+.+
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 103 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKL 103 (351)
T ss_dssp EEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEE
T ss_pred EEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCccee
Confidence 889999999999999986532 22233 7999999999999 6999999999999999999875322111111335
Q ss_pred eEeeCCCccEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCeEEEEeC-------------CCCCCCCeeEEEEeCC---
Q psy10778 369 TILLGHSACVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIGYIREIP-------------CVDPNTPVSHVTMSET--- 430 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~~v~~l~-------------~~h~~~~V~~l~~sp~--- 430 (556)
..+.+|...|.+++|+|+ +.++++++.||.|++||+++++.+..+. . | ...+.+++|+|+
T Consensus 104 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~p~~~~ 181 (351)
T 3f3f_A 104 CTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN-H-LQSDFCLSWCPSRFS 181 (351)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS-C-SCCCEEEEECCCSSS
T ss_pred eeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC-c-ccceeEEEeccCCCC
Confidence 678899999999999999 9999999999999999998875433221 3 5 678999999997
Q ss_pred CCeEEEEeecCcCCCCeEEEEEeC-CcE--EEEe-ecCCCeEEEEEeeCCCCCc-ceEEEEEeCCCeEEEEeCCCC----
Q psy10778 431 NGEIASVLQTTKTGGSILRLHTIN-AQL--ITSL-ASELRITSVTFSNAPEGVS-QNVIVTGHSDGTIQLWSGYKL---- 501 (556)
Q Consensus 431 ~~~i~s~s~~~~~~d~~I~iwdi~-g~~--i~~~-~~~~~i~~i~~s~~pdg~~-~~~l~tg~~dg~I~iwd~~~~---- 501 (556)
+..+++++ .++.+.+|+.. ++. +..+ .|...|++++|+ |++.. .++|++|+.||.|++||+..+
T Consensus 182 ~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~--p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 182 PEKLAVSA-----LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA--PSIGRWYQLIATGCKDGRIRIFKITEKLSPL 254 (351)
T ss_dssp CCEEEEEE-----TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC--CCSSCSSEEEEEEETTSCEEEEEEEECC---
T ss_pred CcEEEEec-----CCCcEEEEccCCCceeeeeecCCCCcceeEEEEC--CCCCCcceEEEEEcCCCeEEEEeCCCCcCcc
Confidence 88999998 88899777776 443 3444 367899999999 66410 158999999999999999764
Q ss_pred ------------------------------------------eEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEE
Q psy10778 502 ------------------------------------------AHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIW 539 (556)
Q Consensus 502 ------------------------------------------~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vw 539 (556)
+.+..+. +|...|++++|+|++++|++|+.||.|++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 255 ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp ------------------------------------CCSEEEEEEEEEC-TTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred ccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 5666676 799999999999999999999999999999
Q ss_pred EcCCCCCcCeeecc
Q psy10778 540 ESSSHNRTPKFLNL 553 (556)
Q Consensus 540 dl~~~~~~~~~~~~ 553 (556)
++.+++....+..+
T Consensus 334 ~~~~~~~~~~~~~~ 347 (351)
T 3f3f_A 334 KATYSNEFKCMSVI 347 (351)
T ss_dssp EECTTSCEEEEEEE
T ss_pred ecCcCcchhheeeh
Confidence 99998777666544
No 41
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=8.4e-29 Score=258.19 Aligned_cols=235 Identities=15% Similarity=0.170 Sum_probs=201.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. +|...|.+++| +++.+++|+.||.|++||+.... .....+.+|
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~ 216 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMA-GHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--------HQIGTLQGH 216 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--------CEEEEEECC
T ss_pred EEEEECCCCeEEEEECcCCeEEEEec-CCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc--------ceeeEEcCC
Confidence 89999999999999999888777776 89999999999 45799999999999999997431 345778899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
.+.|.+++|+|+++++++|+.||.|++||+++++.+..+.. | ...|.+++|+|++..+++.+. ++.++.|++||++
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~-~~~v~~~~~~p~~~~ll~~~~--gs~d~~i~i~d~~ 292 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-H-NAAVKAVAWCPWQSNLLATGG--GTMDKQIHFWNAA 292 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-C-SSCCCEEEECTTSTTEEEEEC--CTTTCEEEEEETT
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-C-cceEEEEEECCCCCCEEEEec--CCCCCEEEEEECC
Confidence 99999999999999999999999999999999999999988 8 899999999998876665441 0158999999997
Q ss_pred -CcEEEEeecCCCeEEEEEeeCCCCCcceEEEE--EeCCCeEEEEeCCCCeEEEE--ecCCCCCCeEEEEEecCCCEEEE
Q psy10778 455 -AQLITSLASELRITSVTFSNAPEGVSQNVIVT--GHSDGTIQLWSGYKLAHLLT--LNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 455 -g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~t--g~~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
++.+..+.+...+.+++|+ |++ +.+++ |+.||.|++||+.+++.... +. +|...|.+++|+|++++|++
T Consensus 293 ~~~~~~~~~~~~~v~~~~~s--~~~---~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 293 TGARVNTVDAGSQVTSLIWS--PHS---KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp TCCEEEEEECSSCEEEEEEC--SSS---SEEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEE
T ss_pred CCCEEEEEeCCCcEEEEEEC--CCC---CeEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEE
Confidence 8888888889999999999 888 78888 44899999999988665544 44 78999999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCcCee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~ 550 (556)
++.||.|++|++.+++.+...
T Consensus 367 ~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 367 AASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ECTTSEEEEEECCC-------
T ss_pred EeCCCcEEEEECCCCcccccc
Confidence 999999999999997766544
No 42
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=8.8e-30 Score=265.98 Aligned_cols=231 Identities=17% Similarity=0.235 Sum_probs=200.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. .| ..+....+++++++|++|+.||.|++||+..+ +....+.+|
T Consensus 70 ~l~~~~~d~~v~i~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~h 138 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIRDGSKMLK-RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN---------LQREIDQAH 138 (420)
T ss_dssp TEEEEEETTEEEEEECCSEETTTTSC-SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC---------EEEEETTSS
T ss_pred eEEEEEcCCcEEEEEecccceeeEEe-cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc---------ceeeecccc
Confidence 78899999999999998776555443 33 44555578999999999999999999998765 344566799
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|++++|+|++++|++|+.||+|++||+.+++.+..+.. | ...|.+++|+|++..|++++ .|+.|++||++
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~l~s~~-----~d~~v~iwd~~ 211 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-H-RATVTDIAIIDRGRNVLSAS-----LDGTIRLWECG 211 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-C-SSCEEEEEEETTTTEEEEEE-----TTSCEEEEETT
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-C-CCcEEEEEEcCCCCEEEEEc-----CCCcEEEeECC
Confidence 99999999999999999999999999999999999999998 9 89999999999999999999 89999999997
Q ss_pred -CcEEEEee----cCCCeEEEEEeeC-------------------CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC
Q psy10778 455 -AQLITSLA----SELRITSVTFSNA-------------------PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN 510 (556)
Q Consensus 455 -g~~i~~~~----~~~~i~~i~~s~~-------------------pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~ 510 (556)
++.+..+. +...+.++++.+. |++ ++|++|+.||.|++||+++++.+..+..+
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG---KYVIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT---EEEEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC---CEEEEEcCCCeEEEEECCCCceeEEcccc
Confidence 77777764 3455666665321 677 89999999999999999999988888757
Q ss_pred CCCCeEEEEEecCCC-EEEEEcCCCcEEEEEcCCCCC
Q psy10778 511 VALPVIAVTYSCDSQ-HLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 511 h~~~V~~l~~s~dg~-~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
|...|++++|+|+++ +|++|+.||.|++||+++++.
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 889999999999998 999999999999999998654
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.1e-28 Score=246.66 Aligned_cols=238 Identities=13% Similarity=0.152 Sum_probs=212.6
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC-----CcEEEEEeeeccCcccc--cccC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTS-----GNILVYEYELNASTNKI--EFCK 366 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D-----g~I~vwd~~~~~~~~~~--~~~~ 366 (556)
.++++++.||.|++|++.+++....+. |...|.+++|+|+++++++++.+ |.|++|++......... ....
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 87 KYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 388999999999999999988777775 88899999999999999999999 99999999876322111 1113
Q ss_pred CCeEeeCCCc--cEEEEEEccCCCEEEEEcCCCcEEEEeCCC-CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC
Q psy10778 367 PPTILLGHSA--CVTDLYLCAGFSVAVSSSEDGTCLLWDINT-IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT 443 (556)
Q Consensus 367 ~~~~l~~h~~--~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~-~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~ 443 (556)
....+..|.. .+.+++|+|+++.+++++.||.|++||+++ ++.+..+.. | ...|.+++|+|++..|++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~----- 237 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-H-EKSISDMQFSPDLTYFITSS----- 237 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-C-SSCEEEEEECTTSSEEEEEE-----
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-C-CCceeEEEECCCCCEEEEec-----
Confidence 5567777877 999999999999999999999999999998 788888988 8 89999999999999999999
Q ss_pred CCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCC--------------eEEEEeCCCCeEEEEec
Q psy10778 444 GGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDG--------------TIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 444 ~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg--------------~I~iwd~~~~~~~~~~~ 508 (556)
.++.|++||++ ++.+..+.+...+.+++|+ |++ +++++++.++ .+++||..+++.+..+.
T Consensus 238 ~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 238 RDTNSFLVDVSTLQVLKKYETDCPLNTAVIT--PLK---EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSS---SEEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEECCCCceeeeecCCCCceeEEec--CCC---ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 89999999997 7888888899999999999 888 8999999888 89999999999999998
Q ss_pred CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 509 TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 509 ~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
+|...|++++|+|++++|++++.||.|++|+++++..
T Consensus 313 -~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 313 -GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred -cccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 8999999999999999999999999999999987443
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3e-29 Score=259.65 Aligned_cols=238 Identities=17% Similarity=0.197 Sum_probs=205.4
Q ss_pred eEEeccCCCeEEEEeCCCCC------CcceEcCCCCCceEEEEEcCC----C---CEEEEEeCCCcEEEEEeeeccCccc
Q psy10778 295 MICWNECDNLIRLKMSKELP------ATPVIRPPLGATIATATTAPD----C---HTLWLGLTSGNILVYEYELNASTNK 361 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~------~~~~~~~~h~~~V~~i~~s~d----g---~~l~tgs~Dg~I~vwd~~~~~~~~~ 361 (556)
++++|+.||.|++|+..+++ ....+. +|...|++++|+|+ + ++|++|+.||.|++|++..+.....
T Consensus 28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp EEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred eEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 89999999999999999877 444554 79999999999999 9 9999999999999999998611000
Q ss_pred ccccCCCeEeeCC-----CccEEEEEEc----cCCCE-EEEEcCCCcEEEEeCCC------CeEEE-----Ee-------
Q psy10778 362 IEFCKPPTILLGH-----SACVTDLYLC----AGFSV-AVSSSEDGTCLLWDINT------IGYIR-----EI------- 413 (556)
Q Consensus 362 ~~~~~~~~~l~~h-----~~~V~~l~~s----~~~~~-l~sgs~Dg~I~iwdl~~------~~~v~-----~l------- 413 (556)
.....+.+| ...|.+++|+ |+++. +++++.||.|++||+.+ ++.+. .+
T Consensus 107 ----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (397)
T 1sq9_A 107 ----VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 182 (397)
T ss_dssp ----EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCS
T ss_pred ----ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccc
Confidence 015778888 5999999999 99999 99999999999999998 65554 55
Q ss_pred CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeec-------CCCeEEEEEeeCCCCCcceEEE
Q psy10778 414 PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLAS-------ELRITSVTFSNAPEGVSQNVIV 485 (556)
Q Consensus 414 ~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~-------~~~i~~i~~s~~pdg~~~~~l~ 485 (556)
.. | ...|.+++|+|++ .+++++ .++.|++||++ ++.+..+.. ...+.+++|+ |++ ++|+
T Consensus 183 ~~-~-~~~i~~~~~~~~~-~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~--~~~---~~l~ 249 (397)
T 1sq9_A 183 MT-P-SQFATSVDISERG-LIATGF-----NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS--PQG---SLLA 249 (397)
T ss_dssp SS-S-CCCCCEEEECTTS-EEEEEC-----TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC--SST---TEEE
T ss_pred cC-C-CCCceEEEECCCc-eEEEEe-----CCCcEEEEECCCCceeEEEeccccccccCCccceEEEC--CCC---CEEE
Confidence 45 6 7899999999999 999988 89999999998 777777764 8899999999 888 8999
Q ss_pred EEeCC---CeEEEEeCCCCeEEEEecCC-------------CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCe
Q psy10778 486 TGHSD---GTIQLWSGYKLAHLLTLNTN-------------VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPK 549 (556)
Q Consensus 486 tg~~d---g~I~iwd~~~~~~~~~~~~~-------------h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~ 549 (556)
+++.| |.|++||+.+++.+..+. + |...|.+++|+|++++|++++.||.|++||+.+++.+..
T Consensus 250 ~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 250 IAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEecCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEE
Confidence 99999 999999999999999987 5 899999999999999999999999999999999877666
Q ss_pred ee
Q psy10778 550 FL 551 (556)
Q Consensus 550 ~~ 551 (556)
+.
T Consensus 329 ~~ 330 (397)
T 1sq9_A 329 LN 330 (397)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.5e-28 Score=256.08 Aligned_cols=237 Identities=17% Similarity=0.242 Sum_probs=198.9
Q ss_pred eEEeccCCCeEEEEeCCCC-C---CcceEcCCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 295 MICWNECDNLIRLKMSKEL-P---ATPVIRPPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~-~---~~~~~~~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
+++.|+.||.|++|++... + ....+ .+|.+.|++++|+| ++++|++|+.||+|++|++..+...... .+++.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~--~~~~~ 125 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL--REPVI 125 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB--CSCSE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc--CCceE
Confidence 5667899999999998643 2 22233 37999999999999 8999999999999999999865221111 14568
Q ss_pred EeeCCCccEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEe--CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC
Q psy10778 370 ILLGHSACVTDLYLCAGF-SVAVSSSEDGTCLLWDINTIGYIREI--PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS 446 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l--~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~ 446 (556)
.+.+|...|++++|+|++ .++++|+.||+|++||+.+++.+..+ .. | ...|.+++|+|++..|++++ .|+
T Consensus 126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~-----~d~ 198 (402)
T 2aq5_A 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV-H-PDTIYSVDWSRDGALICTSC-----RDK 198 (402)
T ss_dssp EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT-C-CSCEEEEEECTTSSCEEEEE-----TTS
T ss_pred EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC-C-CCceEEEEECCCCCEEEEEe-----cCC
Confidence 899999999999999998 69999999999999999999999999 77 8 89999999999999999999 899
Q ss_pred eEEEEEeC-CcEEEEe--ecCC-CeEEEEEeeCCCCCcceEEEEE---eCCCeEEEEeCCCCeE-EEEecCCCCCCeEEE
Q psy10778 447 ILRLHTIN-AQLITSL--ASEL-RITSVTFSNAPEGVSQNVIVTG---HSDGTIQLWSGYKLAH-LLTLNTNVALPVIAV 518 (556)
Q Consensus 447 ~I~iwdi~-g~~i~~~--~~~~-~i~~i~~s~~pdg~~~~~l~tg---~~dg~I~iwd~~~~~~-~~~~~~~h~~~V~~l 518 (556)
.|++||++ ++.+..+ .+.+ .+.+++|+ +++ ++|++| +.|+.|++||+.+++. +......+...+.++
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV--SEG---KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCSSSCCEEEEC--STT---EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred cEEEEeCCCCceeeeeccCCCCCcceEEEEc--CCC---cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 99999997 7777776 3444 38999999 888 899999 7899999999988664 333332467889999
Q ss_pred EEecCCCEEE-EEcCCCcEEEEEcCCCCC
Q psy10778 519 TYSCDSQHLY-ASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 519 ~~s~dg~~l~-sgs~Dg~V~vwdl~~~~~ 546 (556)
+|+|+++.|+ +|+.||.|++|++.+++.
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 9999999986 566899999999998763
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=2.2e-28 Score=266.36 Aligned_cols=230 Identities=21% Similarity=0.299 Sum_probs=204.0
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.++++++.|++|++|+..... ...+. +|...|.+++++|++++|++|+.||.|++|+... +.+..+.+
T Consensus 316 ~~l~t~~~d~~i~~w~~~~~~-~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~----------~~~~~~~~ 383 (577)
T 2ymu_A 316 QTIASASDDKTVKLWNRNGQH-LQTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----------QLLQTLTG 383 (577)
T ss_dssp SEEEEEETTSCEEEEETTSCE-EEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC----------CEEEEEEC
T ss_pred CEEEEEeCCCeEEEEeCCCCe-eEEEe-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC----------CEEEEecC
Confidence 378899999999999987543 33333 7999999999999999999999999999999532 34577899
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
|...|++++|+|++++|++++.|+.|++||. +++.+..+.. | ...|.+++|+|++..+++++ .|+.|++||.
T Consensus 384 ~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~-~-~~~v~~~~~s~d~~~l~~~~-----~d~~v~~w~~ 455 (577)
T 2ymu_A 384 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-H-SSSVWGVAFSPDDQTIASAS-----DDKTVKLWNR 455 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC-C-SSCEEEEEECTTSSEEEEEE-----TTSEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC-C-CCCeEEEEECCCCCEEEEEc-----CCCEEEEEEC
Confidence 9999999999999999999999999999996 4688888888 8 89999999999999999999 8999999999
Q ss_pred CCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcC
Q psy10778 454 NAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNT 532 (556)
Q Consensus 454 ~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~ 532 (556)
+++.+..+ .|...|.+++|+ |++ ++|++++.|+.|++||. +++.+..+. +|...|++++|+|++++|++++.
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~s--pd~---~~las~~~d~~i~iw~~-~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFS--PDG---QTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEEC--TTS---CEEEEEETTSEEEEEET-TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEET
T ss_pred CCCEEEEEcCCCCCEEEEEEc--CCC---CEEEEEeCCCEEEEEcC-CCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEEC
Confidence 98887776 478899999999 899 89999999999999995 788899998 89999999999999999999999
Q ss_pred CCcEEEEEcCCCCCcCeee
Q psy10778 533 EGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 533 Dg~V~vwdl~~~~~~~~~~ 551 (556)
||.|++||.. ++.+..+.
T Consensus 529 dg~v~lwd~~-~~~~~~~~ 546 (577)
T 2ymu_A 529 DKTVKLWNRN-GQLLQTLT 546 (577)
T ss_dssp TSEEEEECTT-SCEEEEEE
T ss_pred cCEEEEEeCC-CCEEEEEc
Confidence 9999999964 44444443
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.9e-28 Score=249.26 Aligned_cols=230 Identities=12% Similarity=0.144 Sum_probs=191.6
Q ss_pred ceEEeccCCCeEEEEeCCCCC-CcceEcCCCCCceEEEEE------cCCCCEEEEEeCCCcEEEEEeeeccCcccccccC
Q psy10778 294 GMICWNECDNLIRLKMSKELP-ATPVIRPPLGATIATATT------APDCHTLWLGLTSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~-~~~~~~~~h~~~V~~i~~------s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
.++++|+.||.|++|++.+++ ....+. +|...|++++| ++++++|++|+.||.|++||+..+. .
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~--------~ 151 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD--------D 151 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS--------S
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEE-ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC--------C
Confidence 489999999999999999887 555554 89999999955 6789999999999999999998651 2
Q ss_pred CCeEeeCCCc----cEEEEE----EccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC---CCCeEE
Q psy10778 367 PPTILLGHSA----CVTDLY----LCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE---TNGEIA 435 (556)
Q Consensus 367 ~~~~l~~h~~----~V~~l~----~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp---~~~~i~ 435 (556)
++..+..|.+ .|.+++ |+++++++++++.||.|++||+++++...... | ...|.+++|+| ++..++
T Consensus 152 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~-~~~v~~~~~~~~~~~~~~l~ 228 (357)
T 3i2n_A 152 PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN--I-KNGVCSLEFDRKDISMNKLV 228 (357)
T ss_dssp CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE--C-SSCEEEEEESCSSSSCCEEE
T ss_pred cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC--C-CCceEEEEcCCCCCCCCEEE
Confidence 4566666554 899998 67899999999999999999999988766554 5 78999999999 899999
Q ss_pred EEeecCcCCCCeEEEEEeC-CcEEE-----E-eecCCCeEEEEEeeCCCCCcce-EEEEEeCCCeEEEEeCCCC------
Q psy10778 436 SVLQTTKTGGSILRLHTIN-AQLIT-----S-LASELRITSVTFSNAPEGVSQN-VIVTGHSDGTIQLWSGYKL------ 501 (556)
Q Consensus 436 s~s~~~~~~d~~I~iwdi~-g~~i~-----~-~~~~~~i~~i~~s~~pdg~~~~-~l~tg~~dg~I~iwd~~~~------ 501 (556)
+++ .++.|++||++ ++.+. . ..+...|.+++|+ |++ + ++++|+.||.|++||+..+
T Consensus 229 ~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 229 ATS-----LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL--PQN---RELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp EEE-----STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE--TTE---EEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred EEC-----CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC--CCC---CcEEEEEeCCCcEEEeecCCCcccccc
Confidence 998 89999999996 32211 1 1478899999999 888 6 8999999999999998643
Q ss_pred -------------eEEEEecCCCCCCeEEEEEecCCCEEE-EEcCCCcEEEEEcCCCCC
Q psy10778 502 -------------AHLLTLNTNVALPVIAVTYSCDSQHLY-ASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 502 -------------~~~~~~~~~h~~~V~~l~~s~dg~~l~-sgs~Dg~V~vwdl~~~~~ 546 (556)
+.+..+. +|..+|++++|+|+++.|+ +++.||.|++||+.+.++
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVT-LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEE-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCCccccccccceeeccc-cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 4566776 7899999999999999888 899999999999987553
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=7.8e-29 Score=255.67 Aligned_cols=230 Identities=12% Similarity=0.037 Sum_probs=180.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcce----Ec----CCCCCceEEEEEcCCCCEEEEEe--CCCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPV----IR----PPLGATIATATTAPDCHTLWLGL--TSGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~----~~----~~h~~~V~~i~~s~dg~~l~tgs--~Dg~I~vwd~~~~~~~~~~~~ 364 (556)
.++.|+.|+.+|+|+......... .. ..+...+.+++|+|||+++++|+ .|++|+|||+.+.
T Consensus 96 ~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-------- 167 (365)
T 4h5i_A 96 KITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-------- 167 (365)
T ss_dssp HHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT--------
T ss_pred EEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC--------
Confidence 456678899999999865432211 11 13456789999999999987654 7899999998865
Q ss_pred cCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEE--eCCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 365 CKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIRE--IPCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 365 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~--l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
+++..+ .|...|.+++|+|+|+++++++.++ +++|+..+++.+.. ... | ...|.+++|+|++..+++++.+..
T Consensus 168 -~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~-~-~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 168 -TEKFEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFD-K-NWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp -EEEEEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCC-T-TEEEEEEEEEETTEEEEEEEESSS
T ss_pred -cEEEEe-CCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCC-C-CCCEEEEEEcCCCCEEEEEecCCc
Confidence 333444 4778899999999999999998554 66666666665543 334 6 778999999999999999883210
Q ss_pred CCCCeEEEEEeCC-cE----EEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeE
Q psy10778 443 TGGSILRLHTINA-QL----ITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVI 516 (556)
Q Consensus 443 ~~d~~I~iwdi~g-~~----i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 516 (556)
....+++|++.. .. ...+ .+...|++++|+ |+| ++||+|+.|+.|+|||+.+++++..+..+|..+|+
T Consensus 243 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~S--pdg---~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~ 316 (365)
T 4h5i_A 243 -KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVD--MKG---ELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAIT 316 (365)
T ss_dssp -CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEEC--TTS---CEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEE
T ss_pred -ceeEEeecccccceecceeeeeecCCCCCeEeEEEC--CCC---CceEEEcCCCEEEEEECCCCcEEEEecCcccCCEE
Confidence 112688898863 21 1222 367899999999 999 89999999999999999999999987558999999
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 517 AVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 517 ~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+++|+|||++|++|+.|++|+||+++.
T Consensus 317 ~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 317 EVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999999999999999975
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-28 Score=251.70 Aligned_cols=230 Identities=14% Similarity=0.147 Sum_probs=193.4
Q ss_pred eEEeccCCCeEEEEeCCCC--CCcceEcCCCCCceEEEEEcCC--CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKEL--PATPVIRPPLGATIATATTAPD--CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--~~~~~~~~~h~~~V~~i~~s~d--g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+|++|+.||.|++|++... +....+. +|...|++++|+++ +++|++|+.||.|++||+..+. ......
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~~ 96 (379)
T 3jrp_A 25 RLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR-------WSQIAV 96 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTE-------EEEEEE
T ss_pred EEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCc-------eeEeee
Confidence 8899999999999999743 3333443 79999999999987 9999999999999999998651 024567
Q ss_pred eeCCCccEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeC-------------CCCe
Q psy10778 371 LLGHSACVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSE-------------TNGE 433 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp-------------~~~~ 433 (556)
+.+|...|.+++|+|+ +.++++++.||.|++||+.++. ....+.. | ...|.+++|+| ++..
T Consensus 97 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 97 HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-H-AIGVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC-C-TTCEEEEEECCCC----------CTTCE
T ss_pred ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC-C-CCceEEEEEcCccccccccccCCCCCCE
Confidence 7889999999999999 9999999999999999999873 3445666 7 89999999999 6899
Q ss_pred EEEEeecCcCCCCeEEEEEeC-Cc----EEEEe-ecCCCeEEEEEeeCCC---CCcceEEEEEeCCCeEEEEeCCCCe--
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-AQ----LITSL-ASELRITSVTFSNAPE---GVSQNVIVTGHSDGTIQLWSGYKLA-- 502 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g~----~i~~~-~~~~~i~~i~~s~~pd---g~~~~~l~tg~~dg~I~iwd~~~~~-- 502 (556)
+++++ .++.|++||++ +. .+..+ .|...|.+++|+ |+ + ++|++++.||.|++||+.++.
T Consensus 175 l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s--p~~~~~---~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 175 FVTGG-----ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLR---SYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp EEEEE-----TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSS---EEEEEEETTSCEEEEEESSTTSC
T ss_pred EEEEe-----CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC--CCCCCC---CeEEEEeCCCEEEEEeCCCCCcc
Confidence 99999 89999999996 32 33334 367899999999 88 7 899999999999999998764
Q ss_pred -EEEEecC-CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 503 -HLLTLNT-NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 503 -~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
....+.. .|...|++++|+|++++|++++.||.|++|++...
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 2222221 57889999999999999999999999999999853
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.1e-30 Score=264.04 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=189.0
Q ss_pred eEEeccCCCeEEEEeCCCC--CCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKEL--PATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
++++|+.||.|++|+..++ +....+. +|...|++++|+|++++|++|+.||+|++||+..+. .......+.
T Consensus 25 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~------~~~~~~~~~ 97 (377)
T 3dwl_C 25 EFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG------TWKQTLVLL 97 (377)
T ss_dssp EEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETTSSEEEC------------CCCCEEECC
T ss_pred EEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC------ceeeeeEec
Confidence 8899999999999999877 4444444 799999999999999999999999999999998762 113456778
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe---EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG---YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~---~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
+|...|++++|+|++++|++|+.||.|++||+++++ ....+..+| ...|.+++|+|++..|++++ .|+.|+
T Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~-----~d~~i~ 171 (377)
T 3dwl_C 98 RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPL-RSTILSLDWHPNNVLLAAGC-----ADRKAY 171 (377)
T ss_dssp CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSC-CSCEEEEEECTTSSEEEEEE-----SSSCEE
T ss_pred ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeeccc-CCCeEEEEEcCCCCEEEEEe-----CCCEEE
Confidence 999999999999999999999999999999999876 356665436 88999999999999999999 899999
Q ss_pred EEEeC-------------------CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE----EEE
Q psy10778 450 LHTIN-------------------AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH----LLT 506 (556)
Q Consensus 450 iwdi~-------------------g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~----~~~ 506 (556)
+||++ ++++..+.|...|.+++|+ |++ ++|++|+.||.|++||+.+++. +..
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFS--PSG---NALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEEC--TTS---SCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred EEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEEC--CCC---CEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 99984 4455555678899999999 899 8999999999999999998876 666
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+. +|..+|++++|+|++++|++|+.++.+ +|+...
T Consensus 247 ~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 247 VK-LSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp EE-CSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred ec-CCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 76 789999999999999999998866655 776653
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=2.5e-28 Score=244.22 Aligned_cols=207 Identities=17% Similarity=0.179 Sum_probs=176.1
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC--CCEEEEEcCCCc
Q psy10778 321 PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG--FSVAVSSSEDGT 398 (556)
Q Consensus 321 ~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~ 398 (556)
.+|.+.|++++|+|+|++||+|+.|++|+||++.... .+.+..+.+|.++|++++|+++ +++|+||+.||+
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-------cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 4799999999999999999999999999999986431 1456889999999999999864 889999999999
Q ss_pred EEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcCCCCeEEEEEeC-Cc---EEEEeecCCCeEEE
Q psy10778 399 CLLWDINTIG--YIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKTGGSILRLHTIN-AQ---LITSLASELRITSV 470 (556)
Q Consensus 399 I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~~d~~I~iwdi~-g~---~i~~~~~~~~i~~i 470 (556)
|++||+.+++ .+..+.. | ...|.+++|+|+ +..|++++ .|+.|++||++ +. ......|...|.++
T Consensus 79 v~iWd~~~~~~~~~~~~~~-h-~~~v~~v~~~p~~~g~~l~s~s-----~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAV-H-SASVNSVQWAPHEYGPMLLVAS-----SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp EEEEEBSSSCBCCCEEECC-C-SSCEEEEEECCGGGCSEEEEEE-----TTSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred EEEEEcCCCceEEEEEeec-C-CCceeEEEeCcCCCCcEEEEEE-----CCCcEEEEEecCCCceeeeeeecccCccceE
Confidence 9999999874 5667777 8 899999999997 78999999 89999999997 32 22233577899999
Q ss_pred EEeeCCCCC----------cceEEEEEeCCCeEEEEeCCCCe----EEEEecCCCCCCeEEEEEecCC---CEEEEEcCC
Q psy10778 471 TFSNAPEGV----------SQNVIVTGHSDGTIQLWSGYKLA----HLLTLNTNVALPVIAVTYSCDS---QHLYASNTE 533 (556)
Q Consensus 471 ~~s~~pdg~----------~~~~l~tg~~dg~I~iwd~~~~~----~~~~~~~~h~~~V~~l~~s~dg---~~l~sgs~D 533 (556)
+|+ |++. ..++|++|+.||.|++||+.+++ ....+. +|...|++++|+|++ .+|++++.|
T Consensus 152 ~~~--p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 152 SWA--PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEC--CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred eec--CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEECC
Confidence 999 5410 01689999999999999997765 566776 899999999999985 899999999
Q ss_pred CcEEEEEcCCC
Q psy10778 534 GLVIIWESSSH 544 (556)
Q Consensus 534 g~V~vwdl~~~ 544 (556)
|.|++||+.+.
T Consensus 229 ~~v~iWd~~~~ 239 (297)
T 2pm7_B 229 RTCIIWTQDNE 239 (297)
T ss_dssp SCEEEEEESST
T ss_pred CcEEEEEeCCC
Confidence 99999999774
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.3e-29 Score=255.96 Aligned_cols=231 Identities=15% Similarity=0.143 Sum_probs=188.0
Q ss_pred eEEeccCCCeEEEEeCCCCCC--cceEcCCCCCceEEEEEcC--CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELPA--TPVIRPPLGATIATATTAP--DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~--~~~~~~~h~~~V~~i~~s~--dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+|++|+.|++|++||+.++.. ...+. +|.+.|.+++|++ ++++|++|+.|++|++||+..+. ......
T Consensus 27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~-------~~~~~~ 98 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-------WEKSHE 98 (316)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC-------CCEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc-------ceEEEE
Confidence 899999999999999987642 33343 8999999999986 48999999999999999987541 123456
Q ss_pred eeCCCccEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCeE---EEEeCCCCCCCCeeEEEEeCC---------------
Q psy10778 371 LLGHSACVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIGY---IREIPCVDPNTPVSHVTMSET--------------- 430 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~~---v~~l~~~h~~~~V~~l~~sp~--------------- 430 (556)
+.+|...|.+++|+|+ +.+|++|+.||+|++||++.+.. ...+.. | ...|.+++|+|+
T Consensus 99 ~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 99 HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA-H-TIGCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS-S-SSCBCCCEECCCCCC------CCSCCC
T ss_pred ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc-c-cCCcceEEEccccCCccccccccccCc
Confidence 7899999999999997 78999999999999999987632 344556 7 789999999997
Q ss_pred --CCeEEEEeecCcCCCCeEEEEEeC-C---cEEEEe-ecCCCeEEEEEeeCCCC-CcceEEEEEeCCCeEEEEeCCCC-
Q psy10778 431 --NGEIASVLQTTKTGGSILRLHTIN-A---QLITSL-ASELRITSVTFSNAPEG-VSQNVIVTGHSDGTIQLWSGYKL- 501 (556)
Q Consensus 431 --~~~i~s~s~~~~~~d~~I~iwdi~-g---~~i~~~-~~~~~i~~i~~s~~pdg-~~~~~l~tg~~dg~I~iwd~~~~- 501 (556)
+..|++++ .|+.|++||++ + +.+..+ .|...|.+++|+ |++ ....+|++|+.||+|++|++.+.
T Consensus 177 ~~~~~l~sgs-----~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s--p~~~~~~~~las~s~D~~v~iw~~~~~~ 249 (316)
T 3bg1_A 177 NYIKRFASGG-----CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA--PSIGLPTSTIASCSQDGRVFIWTCDDAS 249 (316)
T ss_dssp CCCCBEECCB-----TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC--CCSSCSCCEEEEEETTCEEEEEECSSTT
T ss_pred cccceEEEec-----CCCeEEEEEeCCCCccceeeecccCCCceEEEEec--CCCCCCCceEEEEcCCCeEEEEEccCcc
Confidence 36889988 89999999997 3 244444 477899999999 653 01168999999999999998762
Q ss_pred --e-EEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 502 --A-HLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 502 --~-~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+ ....+. .|...|.+++|+|++++|++++.||.|++|+...
T Consensus 250 ~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 250 SNTWSPKLLH-KFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred ccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 1 122333 5788999999999999999999999999999864
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=8.6e-29 Score=252.36 Aligned_cols=227 Identities=16% Similarity=0.137 Sum_probs=192.5
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe-
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL- 371 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l- 371 (556)
.++++|+.||.|++|+..+++....+. +|...|++++|+| ++++|++|+.||.|++||+..+ +.+..+
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~ 155 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD---------TLVAIFG 155 (366)
T ss_dssp EEEEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT---------EEEEEEC
T ss_pred CEEEEecCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC---------eEEEEec
Confidence 389999999999999999888777776 7999999999999 8999999999999999999765 334555
Q ss_pred --eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEE----------------------------EEeCCCCCCCC
Q psy10778 372 --LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYI----------------------------REIPCVDPNTP 421 (556)
Q Consensus 372 --~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v----------------------------~~l~~~h~~~~ 421 (556)
.+|...|.+++|+|+++.+++++.||.|++||+++++.+ ..... | ...
T Consensus 156 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~ 233 (366)
T 3k26_A 156 GVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI-H-RNY 233 (366)
T ss_dssp STTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS-C-SSC
T ss_pred ccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC-C-cce
Confidence 689999999999999999999999999999999976433 23334 6 789
Q ss_pred eeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-Cc--------------EEEEe-ecCCCeEEEEEeeCCCCCcceEEE
Q psy10778 422 VSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQ--------------LITSL-ASELRITSVTFSNAPEGVSQNVIV 485 (556)
Q Consensus 422 V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~--------------~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~ 485 (556)
|.+++|+ +..+++++ .++.|++||++ +. .+..+ .+...|.+++|++.+++ ++|+
T Consensus 234 v~~~~~~--~~~l~~~~-----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---~~l~ 303 (366)
T 3k26_A 234 VDCVRWL--GDLILSKS-----CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ---KMLA 303 (366)
T ss_dssp CCEEEEE--TTEEEEEC-----SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS---SEEE
T ss_pred EEEEEEc--CCEEEEEe-----cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC---cEEE
Confidence 9999999 67999998 89999999986 32 24444 36778999999943338 8999
Q ss_pred EEeCCCeEEEEeCCCCe----EEEEecCCC--CCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 486 TGHSDGTIQLWSGYKLA----HLLTLNTNV--ALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 486 tg~~dg~I~iwd~~~~~----~~~~~~~~h--~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+|+.||.|++||+.+++ ....+. +| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLT-HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEecCCcEEEEECCCCCCccccceEEc-ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999999999998875 444665 55 79999999999999999999999999999853
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.1e-28 Score=273.74 Aligned_cols=229 Identities=16% Similarity=0.182 Sum_probs=195.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||+.++.....+. +|...|++++|+|++++|++|+.|++|++||..... .. .......+|
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~----~~--~~~~~~~~h 516 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC----KY--TISEGGEGH 516 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE----EE--EECSSTTSC
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc----ce--eeccCCCCC
Confidence 89999999999999999887766665 899999999999999999999999999999975320 00 011122579
Q ss_pred CccEEEEEEccCC--CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCAGF--SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~~~--~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
...|.+++|+|++ ..+++|+.||+|++||+++++....+.+ | ...|++++|+|++.+|++++ .|+.|++||
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h-~~~v~~v~~spdg~~l~sg~-----~Dg~i~iwd 589 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-H-TGYVSTVAVSPDGSLCASGG-----KDGVVLLWD 589 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSBCEEEE
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-C-CCCEEEEEEeCCCCEEEEEe-----CCCeEEEEE
Confidence 9999999999987 5899999999999999999999999999 9 99999999999999999999 899999999
Q ss_pred eC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC------------------CC
Q psy10778 453 IN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV------------------AL 513 (556)
Q Consensus 453 i~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h------------------~~ 513 (556)
++ ++.+..+.+...+.+++|+ |++ .++++++ ++.|++||+.+++.+..+.... ..
T Consensus 590 ~~~~~~~~~~~~~~~v~~~~~s--p~~---~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (694)
T 3dm0_A 590 LAEGKKLYSLEANSVIHALCFS--PNR---YWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI 663 (694)
T ss_dssp TTTTEEEECCBCSSCEEEEEEC--SSS---SEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCC
T ss_pred CCCCceEEEecCCCcEEEEEEc--CCC---cEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeE
Confidence 97 8888888888899999999 887 6666665 5679999999999888775211 12
Q ss_pred CeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 514 PVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
.+++++|+|+|++|++|+.||.|++|++..
T Consensus 664 ~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 664 YCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 378999999999999999999999999853
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=5e-28 Score=247.77 Aligned_cols=227 Identities=15% Similarity=0.125 Sum_probs=198.6
Q ss_pred eEEeccCCCeEEEEeCCCCC--CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELP--ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~--~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
++++|+.|+.|++|+..+++ ....+. +|...|++++|+|++++|++|+.||.|++|++..+. . .....+.
T Consensus 22 ~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~---~~~~~~~ 93 (372)
T 1k8k_C 22 QIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT----W---KPTLVIL 93 (372)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE----E---EEEEECC
T ss_pred EEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe----e---eeeEEee
Confidence 78889999999999998875 455554 799999999999999999999999999999997651 0 1123456
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe---EEEEe-CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG---YIREI-PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~---~v~~l-~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
.|...|.+++|+|+++++++++.||.|++||+..++ ....+ .. | ...|.+++|+|++..+++++ .++.|
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~l~~~~-----~dg~i 166 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP-I-RSTVLSLDWHPNSVLLAAGS-----CDFKC 166 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT-C-CSCEEEEEECTTSSEEEEEE-----TTSCE
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc-c-CCCeeEEEEcCCCCEEEEEc-----CCCCE
Confidence 799999999999999999999999999999998875 23444 45 7 88999999999999999999 89999
Q ss_pred EEEEeC-------------------CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 449 RLHTIN-------------------AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 449 ~iwdi~-------------------g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
++||++ ++.+..+ .+...+.+++|+ |++ ++|++++.||.|++||+.+++.+..+.
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS--ANG---SRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--SSS---SEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC--CCC---CEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 999952 6677777 467899999999 888 899999999999999999999999998
Q ss_pred CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 509 TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 509 ~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
.|..+|++++|+|+++++++| .||.|++|++.+
T Consensus 242 -~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 242 -SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred -cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 788899999999999988887 899999999987
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=1.9e-28 Score=274.11 Aligned_cols=232 Identities=19% Similarity=0.227 Sum_probs=197.7
Q ss_pred ceEEeccCCCeEEEEeCCCCCCc-----ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 294 GMICWNECDNLIRLKMSKELPAT-----PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~-----~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
.+|++|+.|++|++|++.+.... ..+ .+|...|++++|+|++++|++|+.||+|++||+..+ ...
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~---------~~~ 465 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG---------VST 465 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------EEE
T ss_pred CEEEEEeCCCcEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC---------cce
Confidence 38999999999999998754321 223 389999999999999999999999999999999765 445
Q ss_pred eEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEe---CCCCCCCCeeEEEEeCCC--CeEEEEeecCcC
Q psy10778 369 TILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREI---PCVDPNTPVSHVTMSETN--GEIASVLQTTKT 443 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l---~~~h~~~~V~~l~~sp~~--~~i~s~s~~~~~ 443 (556)
..+.+|...|++++|+|+++.|++|+.|++|++||+......... .. | ...|.+++|+|++ ..+++++
T Consensus 466 ~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~-h-~~~v~~~~~~~~~~~~~l~s~s----- 538 (694)
T 3dm0_A 466 RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEG-H-RDWVSCVRFSPNTLQPTIVSAS----- 538 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTS-C-SSCEEEEEECSCSSSCEEEEEE-----
T ss_pred eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCC-C-CCcEEEEEEeCCCCcceEEEEe-----
Confidence 788999999999999999999999999999999998754433332 34 6 7789999999986 5788888
Q ss_pred CCCeEEEEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe
Q psy10778 444 GGSILRLHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS 521 (556)
Q Consensus 444 ~d~~I~iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 521 (556)
.|+.|++||++ +++...+ .|...|++++|+ |++ ++|++|+.||.|++||+.+++.+..+. +...|.+++|+
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s--pdg---~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~s 611 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS--PDG---SLCASGGKDGVVLLWDLAEGKKLYSLE--ANSVIHALCFS 611 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--TTS---SEEEEEETTSBCEEEETTTTEEEECCB--CSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe--CCC---CEEEEEeCCCeEEEEECCCCceEEEec--CCCcEEEEEEc
Confidence 89999999997 6676666 478899999999 899 899999999999999999999988886 45789999999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 522 CDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 522 ~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
|++.+|++++ ++.|++||+.++..+..+
T Consensus 612 p~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 612 PNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 9998888766 566999999987654433
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=1.3e-27 Score=247.43 Aligned_cols=235 Identities=12% Similarity=0.146 Sum_probs=197.1
Q ss_pred ceEEeccCCCeEEEEeCCCCCC-----cceEcCCC-----CCceEEEEEc----CCCCE-EEEEeCCCcEEEEEeee---
Q psy10778 294 GMICWNECDNLIRLKMSKELPA-----TPVIRPPL-----GATIATATTA----PDCHT-LWLGLTSGNILVYEYEL--- 355 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~-----~~~~~~~h-----~~~V~~i~~s----~dg~~-l~tgs~Dg~I~vwd~~~--- 355 (556)
.++++|+.||.|++|++.+++. ...+. .| ...|.+++|+ |++++ |++|+.||.|++||+..
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 3899999999999999988775 55554 56 5899999999 99999 99999999999999987
Q ss_pred ---ccCcccccccCCCeEe-------eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCC--C--CCCC
Q psy10778 356 ---NASTNKIEFCKPPTIL-------LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCV--D--PNTP 421 (556)
Q Consensus 356 ---~~~~~~~~~~~~~~~l-------~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~--h--~~~~ 421 (556)
.. .....+...+ ..|...|.+++|+|++ .+++++.||.|++||+++++.+..+... | ....
T Consensus 161 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 161 ESNSL----TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp HHHHT----TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred ccccc----eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc
Confidence 41 1101111266 4589999999999999 9999999999999999999888777530 1 0367
Q ss_pred eeEEEEeCCCCeEEEEeecCcCCC---CeEEEEEeC-CcEEEEee--------------cCCCeEEEEEeeCCCCCcceE
Q psy10778 422 VSHVTMSETNGEIASVLQTTKTGG---SILRLHTIN-AQLITSLA--------------SELRITSVTFSNAPEGVSQNV 483 (556)
Q Consensus 422 V~~l~~sp~~~~i~s~s~~~~~~d---~~I~iwdi~-g~~i~~~~--------------~~~~i~~i~~s~~pdg~~~~~ 483 (556)
|.+++|+|++..|++++ .+ +.|++||++ ++.+..+. +...|.+++|+ |++ ++
T Consensus 236 i~~i~~~~~~~~l~~~~-----~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~ 305 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAH-----DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSG---ET 305 (397)
T ss_dssp EEEEEECSSTTEEEEEE-----EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC--SSS---SE
T ss_pred cceEEECCCCCEEEEEe-----cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEEC--CCC---CE
Confidence 99999999999999998 78 999999997 77777774 68899999999 888 89
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEecC-----CC---------------CCCeEEEEEecCC----------CEEEEEcCC
Q psy10778 484 IVTGHSDGTIQLWSGYKLAHLLTLNT-----NV---------------ALPVIAVTYSCDS----------QHLYASNTE 533 (556)
Q Consensus 484 l~tg~~dg~I~iwd~~~~~~~~~~~~-----~h---------------~~~V~~l~~s~dg----------~~l~sgs~D 533 (556)
|++|+.||.|++||+.+++.+..+.. +| ..+|++++|+|++ ++|++++.|
T Consensus 306 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred EEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC
Confidence 99999999999999999999988872 35 8999999999998 799999999
Q ss_pred CcEEEEEcCCC
Q psy10778 534 GLVIIWESSSH 544 (556)
Q Consensus 534 g~V~vwdl~~~ 544 (556)
|.|++|++.++
T Consensus 386 g~i~iw~~~~g 396 (397)
T 1sq9_A 386 RSIRWFREAGG 396 (397)
T ss_dssp TEEEEEEEEC-
T ss_pred CcEEEEEcCCC
Confidence 99999999875
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=248.68 Aligned_cols=233 Identities=13% Similarity=0.128 Sum_probs=202.2
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccc-----------
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKI----------- 362 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~----------- 362 (556)
.++++|+.||.|++|+ .+++....+. .|...|++++|+|++++|++++.||.|++|++..+......
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeecc-CCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 3899999999999999 4555555554 79999999999999999999999999999998643210000
Q ss_pred ------------------------------------cccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10778 363 ------------------------------------EFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT 406 (556)
Q Consensus 363 ------------------------------------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~ 406 (556)
...+.+..+.+|...|.+++|+|+++++++++.||.|++||+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 00134556778999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEE
Q psy10778 407 IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVI 484 (556)
Q Consensus 407 ~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l 484 (556)
++.+..+.. | ...|.+++|+|++ .+++++ .++.|++||++ ++.+..+. +...+.+++|+ |++ ++|
T Consensus 279 ~~~~~~~~~-~-~~~i~~~~~~~~~-~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s--~~~---~~l 345 (425)
T 1r5m_A 279 GNSQNCFYG-H-SQSIVSASWVGDD-KVISCS-----MDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS--QDG---QKY 345 (425)
T ss_dssp BSCSEEECC-C-SSCEEEEEEETTT-EEEEEE-----TTSEEEEEETTTTEEEEEEECTTCCEEEEEEC--TTS---SEE
T ss_pred CccceEecC-C-CccEEEEEECCCC-EEEEEe-----CCCcEEEEECCCCcEeEecccCCccEEEEEEc--CCC---CEE
Confidence 999999988 8 8999999999998 888888 89999999997 77777665 57899999999 888 899
Q ss_pred EEEeCCCeEEEEeCCCCe--------------------EEEEecCCCCC--CeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 485 VTGHSDGTIQLWSGYKLA--------------------HLLTLNTNVAL--PVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 485 ~tg~~dg~I~iwd~~~~~--------------------~~~~~~~~h~~--~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
++|+.||.|++||+.+++ .+..+. +|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 346 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ-SSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEETTSCEEEEECHHHHC--------------CEECCEEEEEC-CTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc-CcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 999999999999998888 888887 6755 99999999999999999999999999986
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=7.4e-29 Score=252.22 Aligned_cols=232 Identities=14% Similarity=0.141 Sum_probs=197.0
Q ss_pred eEEeccC---CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCC---CCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 295 MICWNEC---DNLIRLKMSKELPATPVIRPPLGATIATATTAPD---CHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~---Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~d---g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
++++|+. ||.|++|++.+++.......+|...|++++|+|+ +++|++|+.||.|++|++..+. ..+
T Consensus 33 l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~ 104 (357)
T 3i2n_A 33 FVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE--------MPV 104 (357)
T ss_dssp EEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS--------SCS
T ss_pred EEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC--------ccE
Confidence 7778877 9999999999887766655579999999999998 6999999999999999998751 266
Q ss_pred eEeeCCCccEEEEEE------ccCCCEEEEEcCCCcEEEEeCCCCe-EEEEeCCCCCCC----CeeEEE----EeCCCCe
Q psy10778 369 TILLGHSACVTDLYL------CAGFSVAVSSSEDGTCLLWDINTIG-YIREIPCVDPNT----PVSHVT----MSETNGE 433 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~------s~~~~~l~sgs~Dg~I~iwdl~~~~-~v~~l~~~h~~~----~V~~l~----~sp~~~~ 433 (556)
..+.+|...|.+++| +++++.|++++.||.|++||+.+++ .+..+.. + .. .+.+++ |+|++..
T Consensus 105 ~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~~~~~ 182 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-V-QGENKRDCWTVAFGNAYNQEERV 182 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-C-TTSCCCCEEEEEEECCCC-CCCE
T ss_pred EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-c-CCCCCCceEEEEEEeccCCCCCE
Confidence 889999999999955 6789999999999999999999886 6777765 4 33 788888 6789999
Q ss_pred EEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCC---CCCcceEEEEEeCCCeEEEEeCCCCeEEEEec-
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAP---EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN- 508 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~p---dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~- 508 (556)
+++++ .++.|++||++ ++......+...+.+++|+ | ++ .+|++|+.||.|++||+.+++.+..+.
T Consensus 183 l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~--~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 183 VCAGY-----DNGDIKLFDLRNMALRWETNIKNGVCSLEFD--RKDISM---NKLVATSLEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp EEEEE-----TTSEEEEEETTTTEEEEEEECSSCEEEEEES--CSSSSC---CEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred EEEEc-----cCCeEEEEECccCceeeecCCCCceEEEEcC--CCCCCC---CEEEEECCCCeEEEEeCcCCCcccceee
Confidence 99999 89999999998 6666666788999999999 7 77 899999999999999997765433322
Q ss_pred ---CCCCCCeEEEEEecCCC-EEEEEcCCCcEEEEEcCCCCC
Q psy10778 509 ---TNVALPVIAVTYSCDSQ-HLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 509 ---~~h~~~V~~l~~s~dg~-~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
.+|...|++++|+|+++ +|++++.||.|++||+.+...
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 16899999999999998 899999999999999987543
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.6e-28 Score=251.99 Aligned_cols=230 Identities=17% Similarity=0.198 Sum_probs=202.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
.+++++.||.|++|+..+++........|...|++++|+|++++|++|+.||.|++||+..+ +.+..+.+|
T Consensus 105 ~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~ 175 (401)
T 4aez_A 105 NVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ---------TKLRTMAGH 175 (401)
T ss_dssp SEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC---------CEEEEECCC
T ss_pred CEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC---------eEEEEecCC
Confidence 45667799999999999998888887678999999999999999999999999999998765 556788899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCC-CCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDIN-TIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~-~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...|.+++|+ ++.+++|+.||.|++||++ ....+..+.. | ...|.+++|+|++..+++++ .|+.|++||+
T Consensus 176 ~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~s~~-----~d~~v~iwd~ 246 (401)
T 4aez_A 176 QARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG-H-SSEVCGLAWRSDGLQLASGG-----NDNVVQIWDA 246 (401)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEET
T ss_pred CCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC-C-CCCeeEEEEcCCCCEEEEEe-----CCCeEEEccC
Confidence 9999999994 5799999999999999999 4667788888 8 89999999999999999999 8999999999
Q ss_pred C-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEe--CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 454 N-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGH--SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 454 ~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
+ ++.+..+ .+...|.+++|+ |++. .++++|+ .||.|++||+.+++.+..+. +...|++++|+|+++.+++
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~--p~~~--~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 247 RSSIPKFTKTNHNAAVKAVAWC--PWQS--NLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp TCSSEEEEECCCSSCCCEEEEC--TTST--TEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEE
T ss_pred CCCCccEEecCCcceEEEEEEC--CCCC--CEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEE
Confidence 8 6777666 478899999999 7653 5777765 79999999999999999987 5688999999999999999
Q ss_pred --EcCCCcEEEEEcCCCCCcC
Q psy10778 530 --SNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 530 --gs~Dg~V~vwdl~~~~~~~ 548 (556)
|+.||.|++|++.+++...
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEE
T ss_pred EeecCCCcEEEEecCCcccee
Confidence 5589999999998854443
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=2.2e-28 Score=252.70 Aligned_cols=232 Identities=13% Similarity=0.142 Sum_probs=196.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcC-CCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRP-PLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~-~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
++++|+.||.|++|+..+++....+.. +|...|.+++|+| ++++|++|+.||.|++||+... ....+.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----------~~~~~~ 157 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS----------VIQVFA 157 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC----------EEEEEE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC----------ceEEEe
Confidence 899999999999999998887777653 6999999999999 7899999999999999998742 223343
Q ss_pred ---CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeE
Q psy10778 373 ---GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTGGSIL 448 (556)
Q Consensus 373 ---~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I 448 (556)
+|...|.+++|+|+++.+++|+.||.|++||+ +++.+..+.. | ...|.+++|+|++. .+++++ .|+.|
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-h-~~~v~~~~~~~~~~~~l~s~~-----~d~~i 229 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-H-KAKVTHAEFNPRCDWLMATSS-----VDATV 229 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC-S-SSCEEEEEECSSCTTEEEEEE-----TTSEE
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc-C-CCcEEEEEECCCCCCEEEEEe-----CCCEE
Confidence 45588999999999999999999999999999 5788889988 8 89999999999998 888888 89999
Q ss_pred EEEEeC-----CcEEEEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC------CCC----
Q psy10778 449 RLHTIN-----AQLITSLASELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT------NVA---- 512 (556)
Q Consensus 449 ~iwdi~-----g~~i~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~------~h~---- 512 (556)
++||++ +..+..+.+...|.+++|+ | ++ ++|++++.||.|++||+.+++.+..+.. .|.
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 230 KLWDLRNIKDKNSYIAEMPHEKPVNAAYFN--PTDS---TKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp EEEEGGGCCSTTCEEEEEECSSCEEEEEEC--TTTS---CEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred EEEeCCCCCcccceEEEecCCCceEEEEEc--CCCC---CEEEEEcCCCcEEEEECCCCccccccccccccccccccceE
Confidence 999996 5677777889999999999 8 88 8999999999999999988776555541 112
Q ss_pred ------CCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 513 ------LPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 513 ------~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
..+..++++|++++ +|+.||.|++||+.+++.+..+.
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~ 347 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLR 347 (383)
T ss_dssp CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEEC
T ss_pred EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeec
Confidence 34455677777766 77899999999999987766654
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-29 Score=269.75 Aligned_cols=236 Identities=12% Similarity=0.043 Sum_probs=187.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcce---EcCCCCCceEEEEEcCC------CCEEEEEeCCCcEEEEEeeeccCccc--cc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPV---IRPPLGATIATATTAPD------CHTLWLGLTSGNILVYEYELNASTNK--IE 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~---~~~~h~~~V~~i~~s~d------g~~l~tgs~Dg~I~vwd~~~~~~~~~--~~ 363 (556)
++++|+.|++|+||++.+++.... ....|.+.|.+++|+|+ +.+||+|+.||+|++|++..+..... ..
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 678999999999999987764321 11257789999999996 57999999999999999976521100 01
Q ss_pred ccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe-EEEEeCCCCCCCCeeEE--EEeCCC-CeEEEEee
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG-YIREIPCVDPNTPVSHV--TMSETN-GEIASVLQ 439 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~-~v~~l~~~h~~~~V~~l--~~sp~~-~~i~s~s~ 439 (556)
...+...+.+|...|++++|+++ ..|++|+.||+|++||++++. ....+.. | ...|.++ ++++++ ..|++++
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H-~~~V~sv~~~~s~~g~~~laS~S- 330 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQV-H-DSYILSVSTAYSDFEDTVVSTVA- 330 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEEC-S-SSCEEEEEEECCTTSCCEEEEEE-
T ss_pred ecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeec-c-cccEEEEEEEcCCCCCeEEEEec-
Confidence 11345678999999999999986 489999999999999999763 4556788 8 8999999 567887 7899999
Q ss_pred cCcCCCCeEEEEEeC-CcEEEEe-ecC--CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCe
Q psy10778 440 TTKTGGSILRLHTIN-AQLITSL-ASE--LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPV 515 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~-g~~i~~~-~~~--~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V 515 (556)
.|++|++||++ ++.+..+ .+. ..+.+++|+ |++ ..+++++.|++|++||++++.++..+. +|...|
T Consensus 331 ----~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs--p~~---~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V 400 (524)
T 2j04_B 331 ----VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC--PQI---YSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTI 400 (524)
T ss_dssp ----TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE--TTT---TEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCE
T ss_pred ----cCCeEEEEECCCCCcccccccccccCcccceEeC--CCc---CeEEEeCCCCcEEEEECcccccceeee-cCCCce
Confidence 99999999997 4433333 222 358899999 888 789999999999999999999888887 799999
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 516 IAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 516 ~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
++++|+|+|+.|++|+.||+|++||+..+
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 99999999999999999999999998653
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=1.1e-27 Score=253.84 Aligned_cols=225 Identities=18% Similarity=0.195 Sum_probs=200.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||..+++....+. +|.+.|++++|++++ .+++|+.||+|++||+.++ +.+..+.+|
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~---------~~~~~~~~h 202 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG---------CCTHVFEGH 202 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT---------EEEEEECCC
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC---------cEEEEECCC
Confidence 89999999999999999988777776 899999999999987 9999999999999999866 456788899
Q ss_pred CccEEEEEEc--cCCCEEEEEcCCCcEEEEeCCCCeE-----------------------EEEeCCCCCCCCeeEEEEeC
Q psy10778 375 SACVTDLYLC--AGFSVAVSSSEDGTCLLWDINTIGY-----------------------IREIPCVDPNTPVSHVTMSE 429 (556)
Q Consensus 375 ~~~V~~l~~s--~~~~~l~sgs~Dg~I~iwdl~~~~~-----------------------v~~l~~~h~~~~V~~l~~sp 429 (556)
.+.|.+++|+ +++.++++|+.||+|++||+.++.. +..+.+ | ...+.++ ++
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~--~~ 278 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG-H-MASVRTV--SG 278 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC-C-SSCEEEE--EE
T ss_pred CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC-c-cceEEEE--cC
Confidence 9999999998 5778999999999999999987652 456666 7 7777776 67
Q ss_pred CCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEe
Q psy10778 430 TNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTL 507 (556)
Q Consensus 430 ~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~ 507 (556)
++..+++++ .|+.|++||++ ++.+..+. |...|.+++|+ +++ +.+++|+.||.|++||+.+++.+..+
T Consensus 279 ~~~~l~~~~-----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 279 HGNIVVSGS-----YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD--HER---KRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp ETTEEEEEE-----TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTT---TEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEe-----CCCeEEEEECCCCcEEEEecCCCCCEEEEEEc--CCC---CEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 789999999 89999999997 77777774 77899999999 888 89999999999999999999999999
Q ss_pred cCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 508 NTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 508 ~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
. +|...|.+++|+ +.+|++++.||.|++||+.+....
T Consensus 349 ~-~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 349 Q-GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp C-CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred e-CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 8 899999999997 589999999999999999886544
No 64
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=4.3e-29 Score=263.46 Aligned_cols=231 Identities=13% Similarity=0.196 Sum_probs=181.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc-CCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR-PPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~-~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+|++|+.||+|+|||+.+++....+. .+|.+.|++++|+| ++++|++|+.||+|++||+.... . .......
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~----~---~~~~~~~ 206 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNI----L---RVFASSD 206 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCE----E---EEEECCS
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCc----e---eEEeccC
Confidence 89999999999999998776655544 37999999999998 68999999999999999986531 0 0011122
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeEEEE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I~iw 451 (556)
.+...+.+++|++++.+|++|+.||.|++||++ ++.+..+.. | ...|.+++|+|++. .+++++ .|+.|++|
T Consensus 207 ~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~-h-~~~v~~v~~~p~~~~~~~s~s-----~d~~v~iw 278 (435)
T 4e54_B 207 TINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRM-H-KKKVTHVALNPCCDWFLATAS-----VDQTVKIW 278 (435)
T ss_dssp SCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBC-C-SSCEEEEEECTTCSSEEEEEE-----TTSBCCEE
T ss_pred CCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEec-c-cceEEeeeecCCCceEEEEec-----CcceeeEE
Confidence 344567899999999999999999999999987 466778888 9 89999999999987 566777 89999999
Q ss_pred EeC-Cc----EEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE-----------------------
Q psy10778 452 TIN-AQ----LITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH----------------------- 503 (556)
Q Consensus 452 di~-g~----~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~----------------------- 503 (556)
|++ ++ ......|...|++++|+ |+| ++|++|+.||.|++||+.+++.
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~s--pdg---~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFS--PDG---ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWH 353 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBC--TTS---SEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEEC
T ss_pred ecccccccceEEEeeeccccccceeEC--CCC---CeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEc
Confidence 996 32 22233578899999999 899 8999999999999998754321
Q ss_pred -------------------------------------EEEecCCCCCCeEEE-EEecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 504 -------------------------------------LLTLNTNVALPVIAV-TYSCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 504 -------------------------------------~~~~~~~h~~~V~~l-~~s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
+..+..+|...|.++ +|+|+|++|++|+ |+.|+||++++++
T Consensus 354 ~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 354 PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 122222455667776 6999999999876 8899999998865
Q ss_pred C
Q psy10778 546 R 546 (556)
Q Consensus 546 ~ 546 (556)
.
T Consensus 433 ~ 433 (435)
T 4e54_B 433 T 433 (435)
T ss_dssp -
T ss_pred e
Confidence 3
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-27 Score=238.01 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=200.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. .|...|.+++|+|++++|++|+.||.|++|++..... .+....+.+|
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~------~~~~~~~~~~ 103 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVY-TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG------EDPLYTLIGH 103 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT------SCC-CEECCC
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEee-cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC------CCcccchhhc
Confidence 78899999999999998876666655 7899999999999999999999999999999875411 1445778999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...|.+++| +++.+++++.||.|++|| .++.+..+.. | ...+.+++++| ++..+++++ .++.|++||.
T Consensus 104 ~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~-----~d~~i~i~d~ 172 (313)
T 3odt_A 104 QGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA-H-NASVWDAKVVSFSENKFLTAS-----ADKTIKLWQN 172 (313)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC-C-SSCEEEEEEEETTTTEEEEEE-----TTSCEEEEET
T ss_pred ccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc-C-CCceeEEEEccCCCCEEEEEE-----CCCCEEEEec
Confidence 999999999 577999999999999999 6678888888 8 89999999998 889999998 8999999994
Q ss_pred CCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 454 NAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 454 ~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
++.+..+. +...+.+++|+ +++ . +++|+.||.|++||+.+++.+..+. +|...|++++|+|++ .|++++
T Consensus 173 -~~~~~~~~~~~~~~i~~~~~~--~~~---~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~ 243 (313)
T 3odt_A 173 -DKVIKTFSGIHNDVVRHLAVV--DDG---H-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-DIVSCG 243 (313)
T ss_dssp -TEEEEEECSSCSSCEEEEEEE--ETT---E-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-CEEEEE
T ss_pred -CceEEEEeccCcccEEEEEEc--CCC---e-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-CEEEEe
Confidence 44444443 78899999999 887 6 9999999999999999999999998 799999999999999 588999
Q ss_pred CCCcEEEEEcCCCCCcCeee
Q psy10778 532 TEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.||.|++||+.+++....+.
T Consensus 244 ~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 244 EDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp TTSEEEEECTTTCCEEEEEE
T ss_pred cCCEEEEEECCCCceeEEEe
Confidence 99999999999987665554
No 66
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.6e-28 Score=253.63 Aligned_cols=247 Identities=14% Similarity=0.176 Sum_probs=198.5
Q ss_pred eEEeccCCCeEEEEeCCC---CCCc-ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccccc---ccCC
Q psy10778 295 MICWNECDNLIRLKMSKE---LPAT-PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIE---FCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~---~~~~-~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~---~~~~ 367 (556)
++++|+.||+|++|+..+ +... ......|...|++++|+|++++|++|+.||+|++||+..... +... ....
T Consensus 78 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~-~~~~~~~~~~~ 156 (437)
T 3gre_A 78 YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQ-ESEVKFLNCEC 156 (437)
T ss_dssp EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEE-TTEEEEEEEEE
T ss_pred EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccC-Cceeeccccce
Confidence 899999999999999875 4322 233336999999999999999999999999999999962200 0000 0011
Q ss_pred CeEee--C--CCccEEEEE--EccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCC-CCCCCeeEEEEeCCCCeEEEEeec
Q psy10778 368 PTILL--G--HSACVTDLY--LCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCV-DPNTPVSHVTMSETNGEIASVLQT 440 (556)
Q Consensus 368 ~~~l~--~--h~~~V~~l~--~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~-h~~~~V~~l~~sp~~~~i~s~s~~ 440 (556)
+..+. . +...+.++. +++++.++++|+.||.|++||+++++.+..+... | ...|++++|+|++..+++++
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~-- 233 (437)
T 3gre_A 157 IRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR-HGAVSSICIDEECCVLILGT-- 233 (437)
T ss_dssp EEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG-GCCEEEEEECTTSCEEEEEE--
T ss_pred eEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC-CCceEEEEECCCCCEEEEEc--
Confidence 12221 1 566777777 5678999999999999999999999999888752 4 68999999999999999999
Q ss_pred CcCCCCeEEEEEeC-CcEEEEe--ecCCCeEEEEEeeC--CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-----
Q psy10778 441 TKTGGSILRLHTIN-AQLITSL--ASELRITSVTFSNA--PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN----- 510 (556)
Q Consensus 441 ~~~~d~~I~iwdi~-g~~i~~~--~~~~~i~~i~~s~~--pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~----- 510 (556)
.|+.|++||++ ++.+..+ .+...|.+++|++. +++ .+|++|+.||.|++||+.+++.+..+...
T Consensus 234 ---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 307 (437)
T 3gre_A 234 ---TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNS---VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPS 307 (437)
T ss_dssp ---TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTE---EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCC
T ss_pred ---CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCc---cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCc
Confidence 89999999998 7777776 45678999988743 456 79999999999999999999988887621
Q ss_pred --------------------CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeeec
Q psy10778 511 --------------------VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFLN 552 (556)
Q Consensus 511 --------------------h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~~ 552 (556)
|...|++++|+ ++++|++|+.||.|++||+.+++....+..
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 308 MEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 55668999999 789999999999999999999877666553
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-28 Score=254.86 Aligned_cols=241 Identities=12% Similarity=0.167 Sum_probs=201.8
Q ss_pred eEEeccCCCeEEEEeCCC---C-CCcceEcCCCCCceEEEEEcCC-CCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 295 MICWNECDNLIRLKMSKE---L-PATPVIRPPLGATIATATTAPD-CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~---~-~~~~~~~~~h~~~V~~i~~s~d-g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
+|++|+.||.|++|+..+ + +....+ .+|...|++++|+|+ +++|++|+.||.|++||+................
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 159 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG 159 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC
T ss_pred eEEEEccCCeEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc
Confidence 889999999999999987 2 233333 379999999999998 8999999999999999998652111000001223
Q ss_pred EeeCCCccEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCC-----CCCeeEEEEeCCC-CeEEEEeecCc
Q psy10778 370 ILLGHSACVTDLYLCAG-FSVAVSSSEDGTCLLWDINTIGYIREIPCVDP-----NTPVSHVTMSETN-GEIASVLQTTK 442 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~-----~~~V~~l~~sp~~-~~i~s~s~~~~ 442 (556)
.+.+|...|.+++|+|+ +.++++++.||.|++||+++++.+..+.. +. ...|.+++|+|++ ..+++++
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~---- 234 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY-TSPNSGIKQQLSVVEWHPKNSTRVATAT---- 234 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC-CCCSSCCCCCEEEEEECSSCTTEEEEEE----
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec-cccccccCCceEEEEECCCCCCEEEEEE----
Confidence 45789999999999999 78999999999999999999999888876 42 4679999999997 5778887
Q ss_pred CCCC---eEEEEEeC-C-cEEEEee--cCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCC
Q psy10778 443 TGGS---ILRLHTIN-A-QLITSLA--SELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALP 514 (556)
Q Consensus 443 ~~d~---~I~iwdi~-g-~~i~~~~--~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~ 514 (556)
.++ .|++||++ + ..+..+. |...|.+++|+ | ++ ++|++++.||.|++||+.+++.+..+. +|...
T Consensus 235 -~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~---~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~ 307 (416)
T 2pm9_A 235 -GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWC--HQDE---HLLLSSGRDNTVLLWNPESAEQLSQFP-ARGNW 307 (416)
T ss_dssp -CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEEC--SSCS---SCEEEEESSSEEEEECSSSCCEEEEEE-CSSSC
T ss_pred -CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeC--CCCC---CeEEEEeCCCCEEEeeCCCCccceeec-CCCCc
Confidence 777 99999997 3 5555554 77899999999 7 77 899999999999999999999999998 78999
Q ss_pred eEEEEEecCC-CEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 515 VIAVTYSCDS-QHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 515 V~~l~~s~dg-~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
|++++|+|++ .+|++++.||.|++|++.+.....
T Consensus 308 v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 308 CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 9999999999 899999999999999998865443
No 68
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.4e-27 Score=241.25 Aligned_cols=218 Identities=19% Similarity=0.241 Sum_probs=188.4
Q ss_pred ceEcCCCCCceEEEEEcCC-CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcC
Q psy10778 317 PVIRPPLGATIATATTAPD-CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSE 395 (556)
Q Consensus 317 ~~~~~~h~~~V~~i~~s~d-g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~ 395 (556)
.+++ +|.+.|++++|+|+ +++|+||+.||+|+|||+...... ...+...+.+|...|.+++|+|++++|++|+.
T Consensus 32 ~tL~-GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~----~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 32 GTLK-GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN----YGIPQRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEC-CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC----SEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEC-CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc----cceeeEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 3454 89999999999997 689999999999999999865211 11245678999999999999999999999999
Q ss_pred CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEe---ecCCCeEEEEE
Q psy10778 396 DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSL---ASELRITSVTF 472 (556)
Q Consensus 396 Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~---~~~~~i~~i~~ 472 (556)
||.|++|+............ + ...+..+.+++++..+++++ .|+.+++||+.+...... .+...+.+++|
T Consensus 107 d~~i~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~s~s-----~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVG-H-TKDVLSVAFSSDNRQIVSGS-----RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp TSEEEEEETTTTEEEEEEEC-C-SSCEEEEEECTTSSCEEEEE-----TTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred cccceEEeecccceeeeecC-C-CCceeEEEEeecCccceeec-----CCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 99999999999888887777 6 78899999999999999999 899999999985443333 35788999999
Q ss_pred eeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 473 SNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 473 s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
++.+.. .++++++.|+.|++||+.+++.+..+. +|..+|++++|+|++++|++|+.||.|++||+.+.+.+..+
T Consensus 180 ~~~~~~---~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 180 SPNSSN---PIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CSCSSS---CEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCCC---cEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 954444 688999999999999999999999998 89999999999999999999999999999999987665444
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4.9e-28 Score=274.57 Aligned_cols=235 Identities=14% Similarity=0.168 Sum_probs=210.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. +|...|++++|+|++++|++|+.||.|++|++.++ +.+..+.+|
T Consensus 27 ~la~~~~~g~v~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~---------~~~~~~~~~ 96 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG---------EKVVDFEAH 96 (814)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC---------CEEEEEECC
T ss_pred EEEEEeCCCEEEEEECCCCceEEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------cEEEEEecC
Confidence 88899999999999999887777776 79999999999999999999999999999999876 556788999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC-eEEEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI-GYIREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~-~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
.+.|++++|+|+++.|++++.||+|++||+.++ .....+.. | ...|.+++|+| ++..+++++ .++.|++||
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~-~~~v~~~~~~p~~~~~l~~~~-----~dg~v~vwd 169 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H-EHFVMCVAFNPKDPSTFASGC-----LDRTVKVWS 169 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-C-SSCEEEEEEETTEEEEEEEEE-----TTSEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-C-CCcEEEEEEEcCCCCEEEEEe-----CCCeEEEEE
Confidence 999999999999999999999999999999987 66778888 8 89999999999 788999998 899999999
Q ss_pred eC-CcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 453 IN-AQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 453 i~-g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
++ +.....+. +...+.+++|++.+++ .+|++|+.||.|++||+.+++.+..+. +|...|++++|+|++.++++
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDK---PYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp TTCSSCSEEEECCCTTCCCEEEECCSTTC---CEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEE
T ss_pred CCCCcceeEEecCCCCCEEEEEEEECCCC---CEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEE
Confidence 96 44444443 3488999999944488 899999999999999999999999998 78999999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCcCee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~ 550 (556)
++.||.|++||+.+++....+
T Consensus 246 ~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 246 GSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EETTSCEEEEETTTCSEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEe
Confidence 999999999999986655443
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.2e-27 Score=247.03 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=184.3
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcC--CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRP--PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~--~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
.++++|+.|+.|++|++.+.. ...+.. .|...|.+++|+|++++|++|+.||.|++||+. + +.+..+
T Consensus 132 ~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~---------~~~~~~ 200 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-G---------HEIFKE 200 (383)
T ss_dssp EEEEEEETTTEEEEEETTSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-S---------CEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-C---------CEEEEe
Confidence 489999999999999998643 333331 345889999999999999999999999999984 2 456788
Q ss_pred eCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCC----CeEEEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCC
Q psy10778 372 LGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINT----IGYIREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGG 445 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~----~~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d 445 (556)
.+|...|.+++|+|+++ ++++|+.||+|++||+++ +..+..+ . | ...|.+++|+| ++..|++++ .|
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~-~-~~~v~~~~~s~~~~~~l~~~~-----~d 272 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-P-H-EKPVNAAYFNPTDSTKLLTTD-----QR 272 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-E-C-SSCEEEEEECTTTSCEEEEEE-----SS
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-c-C-CCceEEEEEcCCCCCEEEEEc-----CC
Confidence 99999999999999999 999999999999999997 6677777 4 6 89999999999 999999999 89
Q ss_pred CeEEEEEeC-CcEEEEee-c-----------------CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 446 SILRLHTIN-AQLITSLA-S-----------------ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 446 ~~I~iwdi~-g~~i~~~~-~-----------------~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
+.|++||++ ++.+..+. + ...+..++++ |++ ++ +|+.||.|++||+.+++.+..
T Consensus 273 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s--~dg---~~--s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 273 NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY--PDD---QL--LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp SEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB--CCT---TT--CTTCCCCEEEEETTTCCEEEE
T ss_pred CcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEec--CCc---cc--ccCCCCeEEEEecCCCceeee
Confidence 999999997 44333322 1 1334446666 666 44 777899999999999999999
Q ss_pred ecC-CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 507 LNT-NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 507 ~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+.. .|...+..++|+|++++|++|+ ||.|++||+++
T Consensus 346 l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 346 LRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 973 2467788889999999999997 99999999975
No 71
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.6e-27 Score=251.21 Aligned_cols=235 Identities=12% Similarity=0.195 Sum_probs=198.7
Q ss_pred ceEEeccCCCeEEEEeCCC----------CCCcceEcCCCCCceEEEEEcCCCC-EEEEEeCCCcEEEEEeeeccCcccc
Q psy10778 294 GMICWNECDNLIRLKMSKE----------LPATPVIRPPLGATIATATTAPDCH-TLWLGLTSGNILVYEYELNASTNKI 362 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~----------~~~~~~~~~~h~~~V~~i~~s~dg~-~l~tgs~Dg~I~vwd~~~~~~~~~~ 362 (556)
.++++|+.||.|++|++.. ......+. +|...|++++|+|++. +|++|+.||+|++|++.........
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred cEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 3899999999999999976 34444444 7999999999999988 9999999999999999864211111
Q ss_pred cccCCCeEeeCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCC---eEEEEeCCCCCCCCeeEEEEeCCCC-eEEEE
Q psy10778 363 EFCKPPTILLGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTI---GYIREIPCVDPNTPVSHVTMSETNG-EIASV 437 (556)
Q Consensus 363 ~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~---~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~ 437 (556)
......+.+|...|.+++|+| ++.++++++.||.|++||++++ +.+..+.. | ...|++++|+|++. .++++
T Consensus 221 --~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~-~~~v~~i~~~p~~~~~l~tg 296 (430)
T 2xyi_A 221 --IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-H-TAEVNCLSFNPYSEFILATG 296 (430)
T ss_dssp --EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-C-SSCEEEEEECSSCTTEEEEE
T ss_pred --eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec-C-CCCeEEEEeCCCCCCEEEEE
Confidence 134567889999999999999 6789999999999999999987 56777777 8 89999999999987 57788
Q ss_pred eecCcCCCCeEEEEEeC--CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC--------------
Q psy10778 438 LQTTKTGGSILRLHTIN--AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------------- 500 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~--g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------------- 500 (556)
+ .++.|++||++ +..+..+. |...|.+++|+ |++. .+|++++.||.|++||+..
T Consensus 297 ~-----~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s--p~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 297 S-----ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNE--TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp E-----TTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC--SSCT--TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred e-----CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC--CCCC--CEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 7 89999999997 45566664 78899999999 7763 4799999999999999976
Q ss_pred CeEEEEecCCCCCCeEEEEEecCCC-EEEEEcCCCcEEEEEcCC
Q psy10778 501 LAHLLTLNTNVALPVIAVTYSCDSQ-HLYASNTEGLVIIWESSS 543 (556)
Q Consensus 501 ~~~~~~~~~~h~~~V~~l~~s~dg~-~l~sgs~Dg~V~vwdl~~ 543 (556)
.+.+..+. +|...|++++|+|++. +|++++.||.|++|++.+
T Consensus 368 ~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 368 PELLFIHG-GHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp TTEEEECC-CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cceEEEcC-CCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 35667776 7899999999999998 999999999999999976
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-28 Score=255.08 Aligned_cols=241 Identities=15% Similarity=0.249 Sum_probs=199.6
Q ss_pred eEEec----------cCCCeEEEEeCCCCCCc-ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccccc
Q psy10778 295 MICWN----------ECDNLIRLKMSKELPAT-PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~g----------s~Dg~I~lw~~~~~~~~-~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~ 363 (556)
++++| +.|+.|++|+..++... ......|...|++++|+|++++|++|+.||.|++|++.......
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~--- 103 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI--- 103 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC---
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc---
Confidence 67777 89999999999876422 22223688999999999999999999999999999998621111
Q ss_pred ccCCCeEeeCCCccEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCe------EEEE---eCCCCCCCCeeEEEEeCC-CC
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAG-FSVAVSSSEDGTCLLWDINTIG------YIRE---IPCVDPNTPVSHVTMSET-NG 432 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~------~v~~---l~~~h~~~~V~~l~~sp~-~~ 432 (556)
+.+..+.+|...|++++|+|+ +.++++++.||.|++||+.+++ .... ... | ...|.+++|+|+ +.
T Consensus 104 --~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~ 179 (416)
T 2pm9_A 104 --NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS-S-VDEVISLAWNQSLAH 179 (416)
T ss_dssp --CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC-S-SCCCCEEEECSSCTT
T ss_pred --cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC-C-CCCeeEEEeCCCCCc
Confidence 345778899999999999998 8899999999999999999876 3332 355 7 789999999999 67
Q ss_pred eEEEEeecCcCCCCeEEEEEeC-CcEEEEeec-------CCCeEEEEEeeCCCCCcceEEEEEeCCC---eEEEEeCCCC
Q psy10778 433 EIASVLQTTKTGGSILRLHTIN-AQLITSLAS-------ELRITSVTFSNAPEGVSQNVIVTGHSDG---TIQLWSGYKL 501 (556)
Q Consensus 433 ~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~-------~~~i~~i~~s~~pdg~~~~~l~tg~~dg---~I~iwd~~~~ 501 (556)
.+++++ .++.|++||++ ++.+..+.. ...+.+++|+ |++. .++++++.|+ .|++||++++
T Consensus 180 ~l~~~~-----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~--~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 180 VFASAG-----SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH--PKNS--TRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEEEES-----SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC--SSCT--TEEEEEECCSSSCCCCEEETTST
T ss_pred EEEEEc-----CCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC--CCCC--CEEEEEECCCCCceEEEEeCCCC
Confidence 888888 89999999998 677777653 6789999999 7752 5899999998 9999999986
Q ss_pred -eEEEEecCCCCCCeEEEEEec-CCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 502 -AHLLTLNTNVALPVIAVTYSC-DSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 502 -~~~~~~~~~h~~~V~~l~~s~-dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+.+..+..+|...|++++|+| ++++|++++.||.|++||+.+++.+..+.
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 455555325889999999999 99999999999999999999877665554
No 73
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=2.8e-27 Score=244.80 Aligned_cols=233 Identities=14% Similarity=0.179 Sum_probs=193.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc------------CCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR------------PPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNK 361 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~------------~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~ 361 (556)
++++|+.||.|++|+..++....... .+|...|++++|+| ++.+|++|+.||.|++||+..+
T Consensus 58 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----- 132 (408)
T 4a11_B 58 YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL----- 132 (408)
T ss_dssp EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT-----
T ss_pred EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC-----
Confidence 88999999999999999876665543 25999999999999 7889999999999999998865
Q ss_pred ccccCCCeEeeCCCccEEEEEEccCC---CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCe-EEEE
Q psy10778 362 IEFCKPPTILLGHSACVTDLYLCAGF---SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGE-IASV 437 (556)
Q Consensus 362 ~~~~~~~~~l~~h~~~V~~l~~s~~~---~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~-i~s~ 437 (556)
+....+ .+...+.++.+++.+ .++++++.||.|++||+++++.+..+.. | ...|.+++|+|++.. ++++
T Consensus 133 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~ll~~~ 205 (408)
T 4a11_B 133 ----QTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-H-RQEILAVSWSPRYDYILATA 205 (408)
T ss_dssp ----EEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-C-CSCEEEEEECSSCTTEEEEE
T ss_pred ----ccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-C-CCcEEEEEECCCCCcEEEEE
Confidence 223333 378889999999854 4999999999999999999999999998 8 899999999999985 7788
Q ss_pred eecCcCCCCeEEEEEeC-Cc-EEEEe----------------ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC
Q psy10778 438 LQTTKTGGSILRLHTIN-AQ-LITSL----------------ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY 499 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~-g~-~i~~~----------------~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~ 499 (556)
+ .++.|++||++ +. .+..+ .+...|.+++|+ |++ ++|++++.||.|++||+.
T Consensus 206 ~-----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~~~dg~i~vwd~~ 275 (408)
T 4a11_B 206 S-----ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT--SDG---LHLLTVGTDNRMRLWNSS 275 (408)
T ss_dssp E-----TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC--TTS---SEEEEEETTSCEEEEETT
T ss_pred c-----CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc--CCC---CEEEEecCCCeEEEEECC
Confidence 8 89999999996 22 33332 356789999999 888 899999999999999986
Q ss_pred CC-----------------------------------------------eEEEEecCCCCCCeEEEEEecCCCEEEEEcC
Q psy10778 500 KL-----------------------------------------------AHLLTLNTNVALPVIAVTYSCDSQHLYASNT 532 (556)
Q Consensus 500 ~~-----------------------------------------------~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~ 532 (556)
++ +.+..+. +|...|++++|+|++++|++|+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 276 NGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK-GHYKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp TCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC-CCSSCEEEEEEETTTTEEEEEET
T ss_pred CCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec-cCCCeEEEEEEcCCCCEEEEECC
Confidence 53 4455565 78999999999999999999999
Q ss_pred CCcEEEEEcCCCCCcCee
Q psy10778 533 EGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 533 Dg~V~vwdl~~~~~~~~~ 550 (556)
||.|++|++.+.+.++..
T Consensus 355 dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 355 DCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp TSCEEEEEECC-------
T ss_pred CCeEEEEeCCCCCccCCC
Confidence 999999999997766543
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=4.9e-27 Score=240.36 Aligned_cols=233 Identities=17% Similarity=0.109 Sum_probs=195.4
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc-CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR-PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~-~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++|+.||.|++|++.+++...... ..|...|++++|+|++++|++|+.||.|++|++....... .......+
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~-----~~~~~~~~ 140 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWW-----VCKHIKKP 140 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEE-----EEEEECTT
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcce-----eeeeeecc
Confidence 88999999999999998876544443 3688999999999999999999999999999998752100 01123367
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeC------------------CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDI------------------NTIGYIREIPCVDPNTPVSHVTMSETNGEIA 435 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl------------------~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~ 435 (556)
|...|++++|+|+++++++|+.||.|++||+ ..++.+..+.. | ...|.+++|+|++..|+
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~ 218 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-S-CGWVHGVCFSANGSRVA 218 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-C-SSCEEEEEECSSSSEEE
T ss_pred cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC-C-CCeEEEEEECCCCCEEE
Confidence 8999999999999999999999999999995 46788889988 8 89999999999999999
Q ss_pred EEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC--CeE--E-----
Q psy10778 436 SVLQTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK--LAH--L----- 504 (556)
Q Consensus 436 s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~--~~~--~----- 504 (556)
+++ .|+.|++||++ ++.+..+. +...+.+++|+ |++ .++++| .||.|++|++.+ ++. +
T Consensus 219 ~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 219 WVS-----HDSTVCLADADKKMAVATLASETLPLLAVTFI--TES---SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp EEE-----TTTEEEEEEGGGTTEEEEEECSSCCEEEEEEE--ETT---EEEEEE-TTSSCEEEEEETTTTEEEECCCCCC
T ss_pred EEe-----CCCEEEEEECCCCceeEEEccCCCCeEEEEEe--cCC---CEEEEE-eCCeEEEEEccCcCceEEEeeccCc
Confidence 999 89999999997 78887775 56799999999 888 788877 899999999977 421 0
Q ss_pred -------------------------------EEecCCCCCCeEEEEEe-cCC---CEEEEEcCCCcEEEEEcCCCC
Q psy10778 505 -------------------------------LTLNTNVALPVIAVTYS-CDS---QHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 505 -------------------------------~~~~~~h~~~V~~l~~s-~dg---~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
..+..+|..+|++++|. ++| .+|++|+.||.|++|++.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 288 PKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp C--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 22223789999999966 666 999999999999999997743
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.8e-28 Score=249.97 Aligned_cols=230 Identities=16% Similarity=0.205 Sum_probs=196.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcC----CCCCceEEEEEcCC----CCEEEEEeCCCcEEEEEeeeccCcccccccC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRP----PLGATIATATTAPD----CHTLWLGLTSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~----~h~~~V~~i~~s~d----g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
+++.++.++.|++|+..+++....+.. .|...|++++|+|+ +++|++|+.||.|++||+..+ +
T Consensus 36 ~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~---------~ 106 (366)
T 3k26_A 36 LVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM---------Q 106 (366)
T ss_dssp EEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC---------C
T ss_pred eEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc---------e
Confidence 555666677999999987665544431 36788999999998 679999999999999998865 5
Q ss_pred CCeEeeCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEe---CCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 367 PPTILLGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREI---PCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 367 ~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l---~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
.+..+.+|...|++++|+| ++.++++|+.||.|++||+++++.+..+ .. | ...|.+++|+|++..+++++
T Consensus 107 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~~~~---- 180 (366)
T 3k26_A 107 CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG-H-RDEVLSADYDLLGEKIMSCG---- 180 (366)
T ss_dssp EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS-C-SSCEEEEEECTTSSEEEEEE----
T ss_pred EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc-c-cCceeEEEECCCCCEEEEec----
Confidence 5678889999999999999 8999999999999999999999999888 66 7 89999999999999999999
Q ss_pred CCCCeEEEEEeC-CcEEEEe-----------------------------ecCCCeEEEEEeeCCCCCcceEEEEEeCCCe
Q psy10778 443 TGGSILRLHTIN-AQLITSL-----------------------------ASELRITSVTFSNAPEGVSQNVIVTGHSDGT 492 (556)
Q Consensus 443 ~~d~~I~iwdi~-g~~i~~~-----------------------------~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~ 492 (556)
.|+.|++||++ ++.+..+ .+...|.+++|+ + +++++++.||.
T Consensus 181 -~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~---~~l~~~~~d~~ 252 (366)
T 3k26_A 181 -MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL----G---DLILSKSCENA 252 (366)
T ss_dssp -TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE----T---TEEEEECSSSE
T ss_pred -CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc----C---CEEEEEecCCE
Confidence 89999999997 3322111 167899999998 4 68999999999
Q ss_pred EEEEeCCCCe--------------EEEEecCCCCCCeEEEEEecC--CCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 493 IQLWSGYKLA--------------HLLTLNTNVALPVIAVTYSCD--SQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 493 I~iwd~~~~~--------------~~~~~~~~h~~~V~~l~~s~d--g~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
|++||+.+++ .+..+. .|...|++++|+|+ +++|++|+.||.|++||+.+++...
T Consensus 253 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 253 IVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEEEeCCCccccccccccCCcchheecccc-ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 9999987764 367776 78899999999999 9999999999999999999876443
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=8.3e-28 Score=243.39 Aligned_cols=228 Identities=12% Similarity=0.156 Sum_probs=194.8
Q ss_pred eEEeccCCCeEEEEeCCCCC----CcceEcCCCCCceEEEEEcCCCC-EEEEEeCCCcEEEEEe-eeccCcccccccCCC
Q psy10778 295 MICWNECDNLIRLKMSKELP----ATPVIRPPLGATIATATTAPDCH-TLWLGLTSGNILVYEY-ELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~----~~~~~~~~h~~~V~~i~~s~dg~-~l~tgs~Dg~I~vwd~-~~~~~~~~~~~~~~~ 368 (556)
++++|+.||.|++|+..++. .... ..|...|++++|+|+++ +|++|+.||.|++|++ ..+ ..
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~----------~~ 92 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQS--LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP----------SF 92 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEE--EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS----------SE
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceee--eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC----------ce
Confidence 78889999999999998776 3222 27999999999999999 9999999999999998 654 23
Q ss_pred eEeeC--CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC---------CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEE
Q psy10778 369 TILLG--HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT---------IGYIREIPCVDPNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 369 ~~l~~--h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~---------~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~ 437 (556)
..+.+ |...|.+++|+| ++.+++++.||.|++||+++ ++.+..+. | ...|.+++|++++ ++++
T Consensus 93 ~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~--l~~~ 166 (342)
T 1yfq_A 93 QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--V-KNKIFTMDTNSSR--LIVG 166 (342)
T ss_dssp EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--S-CCCEEEEEECSSE--EEEE
T ss_pred EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--e-CCceEEEEecCCc--EEEE
Confidence 66778 999999999999 99999999999999999987 66666665 4 7899999999887 8888
Q ss_pred eecCcCCCCeEEEEEeCC---c--EEEEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCC------eEEE
Q psy10778 438 LQTTKTGGSILRLHTINA---Q--LITSLASELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKL------AHLL 505 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~g---~--~i~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~------~~~~ 505 (556)
+ .++.|++||++. . ......+...+.+++|+ | ++ +++++|+.||.|++|++... +...
T Consensus 167 ~-----~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~--~~~~---~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 167 M-----NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL--PKEQ---EGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp E-----STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC--SGGG---CEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred e-----CCCeEEEEECCccccccceeeecCCCCceeEEEEC--CCCC---CEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 8 899999999975 2 22333567899999999 8 88 89999999999999999876 6777
Q ss_pred EecCCCCC---------CeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 506 TLNTNVAL---------PVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 506 ~~~~~h~~---------~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.+. .|.. .|++++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 237 ~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 237 AFR-CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEE-CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eee-cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 776 5544 99999999999999999999999999999877665554
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=8.3e-28 Score=252.90 Aligned_cols=237 Identities=10% Similarity=0.138 Sum_probs=188.6
Q ss_pred eEEeccCCCeEEEEeCCCCC-----------CcceEcCCCC------------CceEEEEEcCCC--CEEEEEeCCCcEE
Q psy10778 295 MICWNECDNLIRLKMSKELP-----------ATPVIRPPLG------------ATIATATTAPDC--HTLWLGLTSGNIL 349 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~-----------~~~~~~~~h~------------~~V~~i~~s~dg--~~l~tgs~Dg~I~ 349 (556)
+|++|+.||.|++|+..+++ ....+. +|. +.|++++|+|++ ..|++|+.||+|+
T Consensus 42 ~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~ 120 (447)
T 3dw8_B 42 LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIK 120 (447)
T ss_dssp EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEE
T ss_pred EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEE
Confidence 89999999999999998765 234444 787 889999999998 7999999999999
Q ss_pred EEEeeeccCcccccc------------------------------cCCCeE-eeCCCccEEEEEEccCCCEEEEEcCCCc
Q psy10778 350 VYEYELNASTNKIEF------------------------------CKPPTI-LLGHSACVTDLYLCAGFSVAVSSSEDGT 398 (556)
Q Consensus 350 vwd~~~~~~~~~~~~------------------------------~~~~~~-l~~h~~~V~~l~~s~~~~~l~sgs~Dg~ 398 (556)
+|++..+........ ..+... ..+|...|++++|+|++++|++| .||.
T Consensus 121 iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~ 199 (447)
T 3dw8_B 121 LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLR 199 (447)
T ss_dssp EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSE
T ss_pred EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCe
Confidence 999986421100000 000112 36899999999999999999999 7999
Q ss_pred EEEEeCCC-CeEEEE-------eCCCCCCCCeeEEEEeCCC-CeEEEEeecCcCCCCeEEEEEeC-CcE----EEEeec-
Q psy10778 399 CLLWDINT-IGYIRE-------IPCVDPNTPVSHVTMSETN-GEIASVLQTTKTGGSILRLHTIN-AQL----ITSLAS- 463 (556)
Q Consensus 399 I~iwdl~~-~~~v~~-------l~~~h~~~~V~~l~~sp~~-~~i~s~s~~~~~~d~~I~iwdi~-g~~----i~~~~~- 463 (556)
|++||+++ ++.+.. +.. | ...|.+++|+|++ ..|++++ .|+.|++||++ ++. +..+..
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 200 INLWHLEITDRSFNIVDIKPANMEE-L-TEVITAAEFHPNSCNTFVYSS-----SKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EEEEETTEEEEEEEEEECCCSSGGG-C-CCCEEEEEECSSCTTEEEEEE-----TTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred EEEEECCCCCceeeeeecccccccc-c-CcceEEEEECCCCCcEEEEEe-----CCCeEEEEECcCCccccceeeEeccC
Confidence 99999994 444442 446 7 8899999999998 8999999 89999999997 443 455543
Q ss_pred CC------------CeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-CeEEEEecCCCCCC---------------e
Q psy10778 464 EL------------RITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-LAHLLTLNTNVALP---------------V 515 (556)
Q Consensus 464 ~~------------~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-~~~~~~~~~~h~~~---------------V 515 (556)
.. .|.+++|+ |+| ++|++++. |.|++||+.+ ++++..+. +|... +
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s--~~g---~~l~~~~~-~~v~iwd~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~i~~~ 345 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFS--HSG---RYMMTRDY-LSVKVWDLNMENRPVETYQ-VHEYLRSKLCSLYENDCIFDK 345 (447)
T ss_dssp -----CCHHHHHTTCEEEEEEC--TTS---SEEEEEES-SEEEEEETTCCSSCSCCEE-SCGGGTTTHHHHHHTSGGGCC
T ss_pred CCccccccccccCceEEEEEEC--CCC---CEEEEeeC-CeEEEEeCCCCccccceee-ccccccccccccccccccccc
Confidence 32 89999999 899 89999998 9999999987 88777777 55421 3
Q ss_pred EEEEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 516 IAVTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 516 ~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
..++|+|++++|++|+.||.|++||+.+++.+
T Consensus 346 ~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 346 FECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp CCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred eEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 34999999999999999999999999986653
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6e-26 Score=226.25 Aligned_cols=225 Identities=15% Similarity=0.208 Sum_probs=192.6
Q ss_pred ceEEeccCCCeEEEEeCCCC---CCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 294 GMICWNECDNLIRLKMSKEL---PATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~---~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
.++++|+.||.|++|++... +....+. +|...|.+++| +++.+++|+.||.|++|| .. +....
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~---------~~~~~ 137 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG---------SLVYN 137 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT---------EEEEE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC---------cEEEe
Confidence 38999999999999998754 3344443 79999999999 578999999999999999 22 34577
Q ss_pred eeCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 371 LLGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 371 l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
+..|...|.++++++ ++..+++++.||.|++|| .++.+..+...| ...+.+++++|++. +++++ .++.|+
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~-~~~i~~~~~~~~~~-~~~~~-----~dg~i~ 208 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIH-NDVVRHLAVVDDGH-FISCS-----NDGLIK 208 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSC-SSCEEEEEEEETTE-EEEEE-----TTSEEE
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccC-cccEEEEEEcCCCe-EEEcc-----CCCeEE
Confidence 889999999999998 899999999999999999 345666665435 78999999999988 88888 899999
Q ss_pred EEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEE
Q psy10778 450 LHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHL 527 (556)
Q Consensus 450 iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l 527 (556)
+||++ ++.+..+. +...|.+++|+ |++ .|++|+.||.|++||+.+++.+..+. .|...|++++|+|+++ +
T Consensus 209 i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~----~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~ 280 (313)
T 3odt_A 209 LVDMHTGDVLRTYEGHESFVYCIKLL--PNG----DIVSCGEDRTVRIWSKENGSLKQVIT-LPAISIWSVDCMSNGD-I 280 (313)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEC--TTS----CEEEEETTSEEEEECTTTCCEEEEEE-CSSSCEEEEEECTTSC-E
T ss_pred EEECCchhhhhhhhcCCceEEEEEEe--cCC----CEEEEecCCEEEEEECCCCceeEEEe-ccCceEEEEEEccCCC-E
Confidence 99998 78887775 78899999999 887 48899999999999999999999998 7888999999999998 6
Q ss_pred EEEcCCCcEEEEEcCCCCCcCe
Q psy10778 528 YASNTEGLVIIWESSSHNRTPK 549 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~~~~~~~~ 549 (556)
++++.||.|++|++++++....
T Consensus 281 ~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 281 IVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEETTSCEEEEESCGGGCCC-
T ss_pred EEEeCCCcEEEEeCCCCceeeh
Confidence 6789999999999998665543
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=2.9e-28 Score=245.99 Aligned_cols=207 Identities=16% Similarity=0.142 Sum_probs=170.7
Q ss_pred cCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEcc--CCCEEEEEcCCC
Q psy10778 320 RPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCA--GFSVAVSSSEDG 397 (556)
Q Consensus 320 ~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~Dg 397 (556)
..+|.+.|++++|+|+|++||+|+.|++|++||+..+. ...+..+.+|.+.|++++|++ ++++|++|+.|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~-------~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG-------QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE-------EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC-------cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 34899999999999999999999999999999997541 023467899999999999986 488999999999
Q ss_pred cEEEEeCCCC--eEEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcCCCCeEEEEEeCCc-EE---EEe-ecCCCeE
Q psy10778 398 TCLLWDINTI--GYIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKTGGSILRLHTINAQ-LI---TSL-ASELRIT 468 (556)
Q Consensus 398 ~I~iwdl~~~--~~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~~d~~I~iwdi~g~-~i---~~~-~~~~~i~ 468 (556)
+|++||++++ +.+..+.+ | ...|.+++|+|+ +..|++++ .|+.|++||++.. .. ..+ .|...+.
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~-h-~~~V~~v~~~p~~~g~~lasgs-----~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAG-H-DSSVNSVCWAPHDYGLILACGS-----SDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp CEEEECCSSSCCCEEEEECC-C-SSCCCEEEECCTTTCSCEEEEC-----SSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred EEEEEECCCCcceEEEEccC-C-CCceEEEEECCCCCCcEEEEEc-----CCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 9999999987 45677888 8 899999999998 77899998 8999999999732 21 122 3567899
Q ss_pred EEEEeeCCCCC--------------cceEEEEEeCCCeEEEEeCCCC---eEEEEecCCCCCCeEEEEEecCC----CEE
Q psy10778 469 SVTFSNAPEGV--------------SQNVIVTGHSDGTIQLWSGYKL---AHLLTLNTNVALPVIAVTYSCDS----QHL 527 (556)
Q Consensus 469 ~i~~s~~pdg~--------------~~~~l~tg~~dg~I~iwd~~~~---~~~~~~~~~h~~~V~~l~~s~dg----~~l 527 (556)
+++|+ |++. ..++|++|+.|+.|++||+... +.+..+. +|...|++++|+|++ .+|
T Consensus 155 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 155 AVSWA--PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CCEEC--CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEE
T ss_pred eEEEc--cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceE
Confidence 99999 5410 0158999999999999999754 4666676 899999999999986 899
Q ss_pred EEEcCCCcEEEEEcCC
Q psy10778 528 YASNTEGLVIIWESSS 543 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~~ 543 (556)
++|+.||+|++|++.+
T Consensus 232 as~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EEEETTCEEEEEECSS
T ss_pred EEEcCCCeEEEEEccC
Confidence 9999999999999976
No 80
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.2e-28 Score=260.91 Aligned_cols=228 Identities=14% Similarity=0.138 Sum_probs=184.9
Q ss_pred ceEEeccCCCeEEEEeCCCCCCc-----------ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccc
Q psy10778 294 GMICWNECDNLIRLKMSKELPAT-----------PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKI 362 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~-----------~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~ 362 (556)
.+|++|+.||+|++|++.++... ..+ .+|...|++++|+++ ..|++|+.||+|++||+..+.
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~----- 298 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE----- 298 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS-----
T ss_pred ceEEEEecCCeEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC-----
Confidence 38999999999999999866422 123 378999999999986 589999999999999997641
Q ss_pred cccCCCeEeeCCCccEEEE--EEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC--CCeeEEEEeCCCCeEEEE
Q psy10778 363 EFCKPPTILLGHSACVTDL--YLCAGF-SVAVSSSEDGTCLLWDINTIGYIREIPCVDPN--TPVSHVTMSETNGEIASV 437 (556)
Q Consensus 363 ~~~~~~~~l~~h~~~V~~l--~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~--~~V~~l~~sp~~~~i~s~ 437 (556)
.+...+.+|...|+++ +|++++ .+|+||+.||+|+|||+++++.+.++.+ | . ..|.+++|+|++..++++
T Consensus 299 ---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~-~-~~~~~v~~v~fsp~~~~l~s~ 373 (524)
T 2j04_B 299 ---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS-R-FRGSNLVPVVYCPQIYSYIYS 373 (524)
T ss_dssp ---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE-E-CSCCSCCCEEEETTTTEEEEE
T ss_pred ---CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc-c-cccCcccceEeCCCcCeEEEe
Confidence 3456789999999999 567887 8999999999999999998876666655 4 3 358899999999999998
Q ss_pred eecCcCCCCeEEEEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC---------------
Q psy10778 438 LQTTKTGGSILRLHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK--------------- 500 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~--------------- 500 (556)
+ .+++|++||++ +..+..+ .|...|.+++|+ |+| ++|++|+.||+|++||+..
T Consensus 374 ~-----~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S--p~g---~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~ 443 (524)
T 2j04_B 374 D-----GASSLRAVPSRAAFAVHPLVSRETTITAIGVS--RLH---PMVLAGSADGSLIITNAARRLLHGIKNSSATQKS 443 (524)
T ss_dssp C-----SSSEEEEEETTCTTCCEEEEECSSCEEEEECC--SSC---CBCEEEETTTEEECCBSCSSTTTCC------CCC
T ss_pred C-----CCCcEEEEECcccccceeeecCCCceEEEEeC--CCC---CeEEEEECCCEEEEEechHhhccccccCccceee
Confidence 8 89999999997 5554444 688999999999 899 8999999999999998521
Q ss_pred -----------------------------CeEEEEecCCCCCCeEEEEEecCC---CEEEEEcCCCcEEEEEcCCC
Q psy10778 501 -----------------------------LAHLLTLNTNVALPVIAVTYSCDS---QHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 501 -----------------------------~~~~~~~~~~h~~~V~~l~~s~dg---~~l~sgs~Dg~V~vwdl~~~ 544 (556)
+..+..+. +|..+|.+++|+|++ ..+++|+.||.|+||++.-.
T Consensus 444 ~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~-gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 444 LRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID-AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEEECBCCSSSCEEEECCCCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eEEEEeccCCCCCeEEccCCceecccccCCcceeeec-CCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 11112222 578899999999995 49999999999999998754
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.3e-27 Score=238.80 Aligned_cols=208 Identities=19% Similarity=0.190 Sum_probs=180.5
Q ss_pred ceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC--CCEEEEEc
Q psy10778 317 PVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG--FSVAVSSS 394 (556)
Q Consensus 317 ~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs 394 (556)
..+. +|.+.|++++|+|++++|++|+.||.|++|++.... .+.+..+.+|...|++++|+++ +++|++|+
T Consensus 5 ~~~~-~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 5 VIAN-AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp CCEE-ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred EEec-CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-------ceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence 3343 799999999999999999999999999999997320 0445778899999999999987 89999999
Q ss_pred CCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcCCCCeEEEEEeC-C---cEEEEeecCCC
Q psy10778 395 EDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKTGGSILRLHTIN-A---QLITSLASELR 466 (556)
Q Consensus 395 ~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~~d~~I~iwdi~-g---~~i~~~~~~~~ 466 (556)
.||.|++||+.+++ .+..+.. | ...|.+++|+|+ +..+++++ .++.|++||++ + .......+...
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~l~~~~-----~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAV-H-SASVNSVQWAPHEYGPLLLVAS-----SDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECC-C-SSCEEEEEECCGGGCSEEEEEE-----TTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred cCCEEEEEEcCCCceeEeeeecC-C-CcceEEEEeCCCCCCCEEEEec-----CCCcEEEEecCCCCceeeEEecCCCCc
Confidence 99999999999987 6778887 8 899999999999 89999999 89999999997 3 22333357889
Q ss_pred eEEEEEeeCC-------------CCCcceEEEEEeCCCeEEEEeCCCCe----EEEEecCCCCCCeEEEEEecC---CCE
Q psy10778 467 ITSVTFSNAP-------------EGVSQNVIVTGHSDGTIQLWSGYKLA----HLLTLNTNVALPVIAVTYSCD---SQH 526 (556)
Q Consensus 467 i~~i~~s~~p-------------dg~~~~~l~tg~~dg~I~iwd~~~~~----~~~~~~~~h~~~V~~l~~s~d---g~~ 526 (556)
|.+++|+ | ++ .++++|+.||.|++||+++++ ....+. +|...|++++|+|+ +.+
T Consensus 150 v~~~~~~--~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 150 VNSASWA--PATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp EEEEEEC--CCC----------CTT---CEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEE
T ss_pred eEEEEEc--CccccccccccCCCCC---CEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCe
Confidence 9999999 6 57 899999999999999997654 445665 78999999999999 899
Q ss_pred EEEEcCCCcEEEEEcCCCC
Q psy10778 527 LYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 527 l~sgs~Dg~V~vwdl~~~~ 545 (556)
|++++.||.|++||+.++.
T Consensus 224 l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEETTSCEEEEEESSTT
T ss_pred EEEEeCCCEEEEEeCCCCC
Confidence 9999999999999998854
No 82
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-26 Score=236.49 Aligned_cols=232 Identities=11% Similarity=0.043 Sum_probs=203.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. +|...|++++|+|++++|++++.||.|++||+..+ +.+..+. |
T Consensus 46 ~l~~~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~-~ 114 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLNGERLGTLD-GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG---------QCVATWK-S 114 (369)
T ss_dssp EEEEEESSSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC---------CEEEEEE-C
T ss_pred EEEEEeCCCEEEEEeCCCchhhhhhh-hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------cEEEEee-c
Confidence 78899999999999999888777775 79999999999999999999999999999999865 3445555 8
Q ss_pred CccEEEEEEccCCCEEEEEcCC-----CcEEEEeCCCCe-----------EEEEeCCCCCCC--CeeEEEEeCCCCeEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSED-----GTCLLWDINTIG-----------YIREIPCVDPNT--PVSHVTMSETNGEIAS 436 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~D-----g~I~iwdl~~~~-----------~v~~l~~~h~~~--~V~~l~~sp~~~~i~s 436 (556)
...|.+++|+|+++.+++++.+ |.|.+||+..+. .+..+.. | .. .+.+++|+|++..+++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT-H-EGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC-C-TTCCCEEEEEECGGGCEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC-C-cCccceeEEEEcCCCCEEEE
Confidence 8999999999999999999999 999999987653 2334444 4 44 8999999999999999
Q ss_pred EeecCcCCCCeEEEEEeC--CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCC
Q psy10778 437 VLQTTKTGGSILRLHTIN--AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVAL 513 (556)
Q Consensus 437 ~s~~~~~~d~~I~iwdi~--g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~ 513 (556)
++ .++.|++||++ ++.+..+. +...|.+++|+ |++ ++|++++.||.|++||+.+++.+..+. +..
T Consensus 193 ~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~ 260 (369)
T 3zwl_B 193 GH-----KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS--PDL---TYFITSSRDTNSFLVDVSTLQVLKKYE--TDC 260 (369)
T ss_dssp EE-----TTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC--TTS---SEEEEEETTSEEEEEETTTCCEEEEEE--CSS
T ss_pred Ec-----CCCEEEEEECCCCcEeEEEEecCCCceeEEEEC--CCC---CEEEEecCCceEEEEECCCCceeeeec--CCC
Confidence 99 89999999997 46666664 67899999999 888 899999999999999999999999987 678
Q ss_pred CeEEEEEecCCCEEEEEcCCC--------------cEEEEEcCCCCCcCeee
Q psy10778 514 PVIAVTYSCDSQHLYASNTEG--------------LVIIWESSSHNRTPKFL 551 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg--------------~V~vwdl~~~~~~~~~~ 551 (556)
.+.+++|+|+++++++++.++ .+++||+.+++.+..+.
T Consensus 261 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE
T ss_pred CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee
Confidence 999999999999999999998 89999998877665554
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-27 Score=245.18 Aligned_cols=232 Identities=13% Similarity=0.213 Sum_probs=195.4
Q ss_pred eEEeccCCCeEEEEeC----CCCCC------cceEcC---------CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeee
Q psy10778 295 MICWNECDNLIRLKMS----KELPA------TPVIRP---------PLGATIATATTAPDCHTLWLGLTSGNILVYEYEL 355 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~----~~~~~------~~~~~~---------~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~ 355 (556)
++++|+.||.|++|++ .+++. ...+.. +|.+.|++++|+|++++|++|+.||.|++|+. .
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~ 138 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-T 138 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEET-T
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-C
Confidence 8889999999999999 77762 333321 15779999999999999999999999999993 2
Q ss_pred ccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCC--------------
Q psy10778 356 NASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTP-------------- 421 (556)
Q Consensus 356 ~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~-------------- 421 (556)
+ +.+..+.+|...|.+++|+|+++.|++++.||.|++||+.+++.+..+.. + ...
T Consensus 139 ~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~ 207 (425)
T 1r5m_A 139 G---------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL-K-ETGGSSINAENHSGDGS 207 (425)
T ss_dssp S---------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC-C----------------CC
T ss_pred C---------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec-c-ccCccceeeccccCCcc
Confidence 2 44577889999999999999999999999999999999999999998887 6 555
Q ss_pred -eeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeC
Q psy10778 422 -VSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSG 498 (556)
Q Consensus 422 -V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~ 498 (556)
+.+++|+++ +.+++++ .++.|++||++ ++.+..+ .+...|.+++|+ |++ ++|++++.||.|++||+
T Consensus 208 ~~~~~~~~~~-~~~~~~~-----~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~--~~~---~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 208 LGVDVEWVDD-DKFVIPG-----PKGAIFVYQITEKTPTGKLIGHHGPISVLEFN--DTN---KLLLSASDDGTLRIWHG 276 (425)
T ss_dssp CBSCCEEEET-TEEEEEC-----GGGCEEEEETTCSSCSEEECCCSSCEEEEEEE--TTT---TEEEEEETTSCEEEECS
T ss_pred eeeEEEEcCC-CEEEEEc-----CCCeEEEEEcCCCceeeeeccCCCceEEEEEC--CCC---CEEEEEcCCCEEEEEEC
Confidence 999999997 5577777 79999999997 5555555 467899999999 888 89999999999999999
Q ss_pred CCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 499 YKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 499 ~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.+++.+..+. +|...|.+++|+|++ .+++++.||.|++||+.+++.+..+.
T Consensus 277 ~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 277 GNGNSQNCFY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp SSBSCSEEEC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCccceEec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 9999888887 789999999999999 99999999999999998876655443
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=7.2e-26 Score=239.95 Aligned_cols=234 Identities=15% Similarity=0.201 Sum_probs=201.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEc--CCCCEEEEEeCCCcEEEEEeeeccCccccc---------
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTA--PDCHTLWLGLTSGNILVYEYELNASTNKIE--------- 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s--~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~--------- 363 (556)
++++|+.||+|++||..+++....+. +|.+.|.+++++ +++.++++|+.||+|++||+..........
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 89999999999999999887776665 799999999998 578899999999999999998653211100
Q ss_pred -----ccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEe
Q psy10778 364 -----FCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVL 438 (556)
Q Consensus 364 -----~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s 438 (556)
.......+.+|...|.++ +++++++++|+.||.|++||+.+++.+..+.. | ...|.+++|+|++..+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-H-TDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC-C-SSCEEEEEEETTTTEEEEEE
T ss_pred eccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-C-CCCEEEEEEcCCCCEEEEEe
Confidence 001245788999999887 56788999999999999999999999999998 9 89999999999999999999
Q ss_pred ecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeE
Q psy10778 439 QTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVI 516 (556)
Q Consensus 439 ~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~ 516 (556)
.|+.|++||++ ++.+..+. |...|.+++|+ + .+|++|+.||.|++||+.+++...... +...+.
T Consensus 330 -----~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~----~---~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~ 395 (464)
T 3v7d_B 330 -----MDTTIRIWDLENGELMYTLQGHTALVGLLRLS----D---KFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSA 395 (464)
T ss_dssp -----TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC----S---SEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCC
T ss_pred -----CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc----C---CEEEEEeCCCcEEEEECCCCceeeeec--CCCCcc
Confidence 89999999997 88887774 77899999997 3 589999999999999999988777775 567788
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 517 AVTYSCDSQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 517 ~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
.++|+++++++++|+ ||.|++||+.+++.+.
T Consensus 396 ~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 396 ITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 899999999999998 8999999999977654
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=6.6e-28 Score=254.41 Aligned_cols=210 Identities=16% Similarity=0.187 Sum_probs=173.6
Q ss_pred CCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEcc-CCCEEEEEcCCCcE
Q psy10778 322 PLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCA-GFSVAVSSSEDGTC 399 (556)
Q Consensus 322 ~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I 399 (556)
.|...|+|++|+| ++++||+|+.||+|+|||+..+.. .....+.+|.+.|++|+|+| ++.+|+||+.||+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-------~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-------PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-------CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-------eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 5888999999999 567999999999999999876511 12234568999999999998 68899999999999
Q ss_pred EEEeCCCCeEEEEeCC-CCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEe-ecCCCeEEEEEeeCCC
Q psy10778 400 LLWDINTIGYIREIPC-VDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSL-ASELRITSVTFSNAPE 477 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~-~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~-~~~~~i~~i~~s~~pd 477 (556)
++||++++........ .+ ...+.+++|+|++..|++++ .++.|++||++++.+..+ .|...|.+++|+ |+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~-----~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~--p~ 261 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGD-----NVGNVILLNMDGKELWNLRMHKKKVTHVALN--PC 261 (435)
T ss_dssp EEEETTSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEEC-----SSSBEEEEESSSCBCCCSBCCSSCEEEEEEC--TT
T ss_pred EEeeccCCceeEEeccCCC-CccEEEEEECCCCCEEEEEe-----CCCcEeeeccCcceeEEEecccceEEeeeec--CC
Confidence 9999987544333332 02 34678999999999999999 899999999998766665 468899999999 77
Q ss_pred CCcceEEEEEeCCCeEEEEeCCCCeEEEEec--CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 478 GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN--TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 478 g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~--~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
+. .++++|+.||.|++||+++.+....+. .+|...|++++|+|+|.+|++++.||.|++||+.++....
T Consensus 262 ~~--~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 262 CD--WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp CS--SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred Cc--eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 63 589999999999999998776544332 1688999999999999999999999999999998866543
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.2e-27 Score=240.57 Aligned_cols=227 Identities=14% Similarity=0.155 Sum_probs=185.8
Q ss_pred eEEeccCCCeEEEEeCCC-CCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKE-LPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~-~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++|+.||.|++|++.+ +........+|...|++++|+|++++|++|+.||.|++||+..+ + ...+.+
T Consensus 56 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---------~-~~~~~~ 125 (368)
T 3mmy_A 56 FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN---------Q-AIQIAQ 125 (368)
T ss_dssp EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------E-EEEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC---------C-ceeecc
Confidence 899999999999999987 44442333379999999999999999999999999999998865 2 234678
Q ss_pred CCccEEEEEE--ccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCC---------------------------------
Q psy10778 374 HSACVTDLYL--CAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDP--------------------------------- 418 (556)
Q Consensus 374 h~~~V~~l~~--s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~--------------------------------- 418 (556)
|...|++++| ++++.++++++.||.|++||+++++.+..+.. +.
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 204 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL-PERCYCADVIYPMAVVATAERGLIVYQLENQPSEF 204 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC-SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEE
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec-CCCceEEEecCCeeEEEeCCCcEEEEEeccccchh
Confidence 9999999999 88999999999999999999998876666554 20
Q ss_pred -------CCCeeEEEEeCCCCe----EEEEeecCcCCCCeEEEEEeCC----cEEEEeecC-C------------CeEEE
Q psy10778 419 -------NTPVSHVTMSETNGE----IASVLQTTKTGGSILRLHTINA----QLITSLASE-L------------RITSV 470 (556)
Q Consensus 419 -------~~~V~~l~~sp~~~~----i~s~s~~~~~~d~~I~iwdi~g----~~i~~~~~~-~------------~i~~i 470 (556)
...+.++++.++... +++++ .++.|++||++. ..+..+... . .|.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 279 (368)
T 3mmy_A 205 RRIESPLKHQHRCVAIFKDKQNKPTGFALGS-----IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGI 279 (368)
T ss_dssp EECCCSCSSCEEEEEEEECTTSCEEEEEEEE-----TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEE
T ss_pred hhccccccCCCceEEEcccCCCCCCeEEEec-----CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEE
Confidence 133445555554444 88888 899999999973 333344322 2 69999
Q ss_pred EEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 471 TFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+|+ |++ ++|++|+.||.|++||+.+++++..+. +|..+|++++|+|+|++|++++.|+..+.|++.+
T Consensus 280 ~~s--p~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 280 AFH--PVH---GTLATVGSDGRFSFWDKDARTKLKTSE-QLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EEC--TTT---CCEEEEETTSCEEEEETTTTEEEEECC-CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred EEe--cCC---CEEEEEccCCeEEEEECCCCcEEEEec-CCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999 888 899999999999999999999999998 8899999999999999999999998766666544
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=3.5e-26 Score=271.56 Aligned_cols=226 Identities=17% Similarity=0.175 Sum_probs=205.4
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++|+..+++....+. +|.+.|++++|+|++++|++|+.||+|++||+.++ +.+..+.+|
T Consensus 629 ~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~---------~~~~~~~~~ 698 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG---------KLVHTYDEH 698 (1249)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------CEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC---------ceEEEEcCC
Confidence 88999999999999999988777776 89999999999999999999999999999999876 566888999
Q ss_pred CccEEEEEEcc--CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCA--GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~--~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
...|.+++|++ ++.++++|+.||.|++||+.+++.+..+.+ | ...|.+++|+|++..+++++ .|+.|++||
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-h-~~~v~~~~~sp~~~~l~s~s-----~dg~v~vwd 771 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-H-TNSVNHCRFSPDDELLASCS-----ADGTLRLWD 771 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-C-SSCEEEEEECSSTTEEEEEE-----SSSEEEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-C-CCCEEEEEEecCCCEEEEEE-----CCCeEEEEe
Confidence 99999999999 455899999999999999999999999999 9 99999999999999999999 899999999
Q ss_pred eC-CcEEEEe--------------------------------------------------------ecCCCeEEEEEeeC
Q psy10778 453 IN-AQLITSL--------------------------------------------------------ASELRITSVTFSNA 475 (556)
Q Consensus 453 i~-g~~i~~~--------------------------------------------------------~~~~~i~~i~~s~~ 475 (556)
++ ++....+ .+...+.+++|+
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s-- 849 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS-- 849 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC--
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc--
Confidence 86 4332221 235678889999
Q ss_pred CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 476 PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 476 pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
|++ +++++|+.||.|++||+.+++.+..+. +|...|++++|+|+++.+++++.||.|++|++.+
T Consensus 850 p~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 850 PYD---HLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp SST---TEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCC---CEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 888 899999999999999999999999998 8999999999999999999999999999999864
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.6e-26 Score=243.64 Aligned_cols=218 Identities=19% Similarity=0.308 Sum_probs=195.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++||..+++....+. +|.+.|+++++ ++++|++|+.||+|++||+.++ +.+..+.+|
T Consensus 145 ~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~---------~~~~~~~~h 212 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNTLECKRILT-GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG---------EMLNTLIHH 212 (435)
T ss_dssp EEEEEESSSCEEEEESSSCCEEEEEC-CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC---------CEEEEECCC
T ss_pred EEEEEeCCCeEEEEeCCCCeEEEEEc-CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC---------cEEEEEcCC
Confidence 88999999999999999988777775 89999999998 7889999999999999999876 556788999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEE---EEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYI---REIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v---~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
...|.+++|+ +..+++|+.||+|++||+.+++.+ ..+.+ | ...|.++++ ++..+++++ .|+.|++|
T Consensus 213 ~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-~-~~~v~~~~~--~~~~l~s~~-----~dg~i~vw 281 (435)
T 1p22_A 213 CEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVG-H-RAAVNVVDF--DDKYIVSAS-----GDRTIKVW 281 (435)
T ss_dssp CSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECC-C-SSCEEEEEE--ETTEEEEEE-----TTSEEEEE
T ss_pred CCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecC-C-CCcEEEEEe--CCCEEEEEe-----CCCeEEEE
Confidence 9999999997 459999999999999999987654 66777 8 899999999 678999999 89999999
Q ss_pred EeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 452 TIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 452 di~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
|++ ++.+..+. +...+.+++++ + +++++|+.||.|++||+.+++.+..+. +|...|++++| ++.+|++
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~~----~---~~l~~g~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQYR----D---RLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEE----T---TEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEC--CSSEEEE
T ss_pred ECCcCcEEEEEcCCCCcEEEEEeC----C---CEEEEEeCCCeEEEEECCCCCEEEEEe-CCcCcEEEEEe--cCCEEEE
Confidence 997 77777775 67899999986 4 689999999999999999999999998 89999999999 6889999
Q ss_pred EcCCCcEEEEEcCCCC
Q psy10778 530 SNTEGLVIIWESSSHN 545 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~ 545 (556)
|+.||.|++||+.++.
T Consensus 352 g~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 352 GAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EETTSCEEEEEHHHHT
T ss_pred EeCCCcEEEEECCCCC
Confidence 9999999999997643
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4.7e-27 Score=241.78 Aligned_cols=227 Identities=14% Similarity=0.102 Sum_probs=173.8
Q ss_pred eEEeccCCCeEEEEeCCCCC-Ccce-EcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELP-ATPV-IRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~-~~~~-~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+|++|+.||+|++|++.+++ .... ....|...|++++|+|++++|++|+.|+.|++||+..+.. ......+.
T Consensus 69 ~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------~~~~~~~~ 142 (377)
T 3dwl_C 69 RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND------WWVSKHLK 142 (377)
T ss_dssp CEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----------CCCCEEEC
T ss_pred EEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc------ceeeeEee
Confidence 89999999999999998876 2222 2237999999999999999999999999999999987511 12456777
Q ss_pred C-CCccEEEEEEccCCCEEEEEcCCCcEEEEeCC------------------CCeEEEEeCCCCCCCCeeEEEEeCCCCe
Q psy10778 373 G-HSACVTDLYLCAGFSVAVSSSEDGTCLLWDIN------------------TIGYIREIPCVDPNTPVSHVTMSETNGE 433 (556)
Q Consensus 373 ~-h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~------------------~~~~v~~l~~~h~~~~V~~l~~sp~~~~ 433 (556)
+ |...|++++|+|++++|++|+.||+|++||+. .++.+..+ . | ...|.+++|+|++.+
T Consensus 143 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 143 RPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P-S-GGWVHAVGFSPSGNA 219 (377)
T ss_dssp SSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C-C-SSSEEEEEECTTSSC
T ss_pred cccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-c-C-CceEEEEEECCCCCE
Confidence 7 99999999999999999999999999999985 35566667 6 8 899999999999999
Q ss_pred EEEEeecCcCCCCeEEEEEeC-CcE----EEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe-----
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-AQL----ITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA----- 502 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g~~----i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~----- 502 (556)
|++++ .|+.|++||++ ++. +..+ .|...|.+++|+ |++ ++|++|+.++.+ +|+.....
T Consensus 220 l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~---~~l~~~~~~~~~-~~~~~~~~~~~~~ 288 (377)
T 3dwl_C 220 LAYAG-----HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA--NES---AIVAAGYNYSPI-LLQGNESGWAHTR 288 (377)
T ss_dssp EEEEE-----TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE--ETT---EEEEEESSSSEE-EECCCC---CCSB
T ss_pred EEEEe-----CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc--CCC---CEEEEEcCCcEE-EEEeCCCceEEEe
Confidence 99999 89999999997 443 4444 467889999999 888 899999877666 66553111
Q ss_pred ----------------------------------EEEE------------ecCCCCCCeEEEEEecCC-C---EEEEEcC
Q psy10778 503 ----------------------------------HLLT------------LNTNVALPVIAVTYSCDS-Q---HLYASNT 532 (556)
Q Consensus 503 ----------------------------------~~~~------------~~~~h~~~V~~l~~s~dg-~---~l~sgs~ 532 (556)
.... +...|...|+++++.+.. . .|++|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~ 368 (377)
T 3dwl_C 289 DLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGT 368 (377)
T ss_dssp CCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEET
T ss_pred eecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecC
Confidence 0000 111388999999976543 3 6999999
Q ss_pred CCcEEEEEc
Q psy10778 533 EGLVIIWES 541 (556)
Q Consensus 533 Dg~V~vwdl 541 (556)
||.|++||+
T Consensus 369 Dg~i~iWdl 377 (377)
T 3dwl_C 369 DGRVVLWTL 377 (377)
T ss_dssp TSEEEEECC
T ss_pred CCcEEEecC
Confidence 999999985
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=6.1e-26 Score=248.20 Aligned_cols=239 Identities=15% Similarity=0.224 Sum_probs=204.3
Q ss_pred eEEeccCCCeEEEEeCCCC----CCcceEcCCCCCc-eEEEEEcC--CCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKEL----PATPVIRPPLGAT-IATATTAP--DCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~----~~~~~~~~~h~~~-V~~i~~s~--dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
++++++ |+.|++|++.++ +....+. +|.+. |++++|+| ++++|++|+.||+|++|++..+... .......
T Consensus 32 ~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~-~~~~~~~ 108 (615)
T 1pgu_A 32 AIAYPC-GKSAFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKES-NSVEVNV 108 (615)
T ss_dssp EEEEEE-TTEEEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGG-TEEEEEE
T ss_pred EEEEec-CCeEEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccc-ccccccc
Confidence 666666 899999999987 6666665 89999 99999999 9999999999999999999743100 0001134
Q ss_pred CeEeeCCCccEEEEEEccCCCEEEEEcCC----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCc
Q psy10778 368 PTILLGHSACVTDLYLCAGFSVAVSSSED----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTK 442 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s~~~~~l~sgs~D----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~ 442 (556)
...+.+|...|.+++|+|+++.+++++.+ +.|.+|| .++.+..+.. | ...|.+++|+|++. .+++++
T Consensus 109 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~-~-~~~v~~~~~~~~~~~~l~~~~---- 180 (615)
T 1pgu_A 109 KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSG-H-SQRINACHLKQSRPMRSMTVG---- 180 (615)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCS-C-SSCEEEEEECSSSSCEEEEEE----
T ss_pred cchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeec-C-CccEEEEEECCCCCcEEEEEe----
Confidence 56788899999999999999999999987 6888888 5678888988 9 89999999999998 788888
Q ss_pred CCCCeEEEEEeC-CcEEEEee-cCC---CeEEEEEeeCCC-CCcceEEEEEeCCCeEEEEeCCCCeEEEEecC---CCCC
Q psy10778 443 TGGSILRLHTIN-AQLITSLA-SEL---RITSVTFSNAPE-GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT---NVAL 513 (556)
Q Consensus 443 ~~d~~I~iwdi~-g~~i~~~~-~~~---~i~~i~~s~~pd-g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~---~h~~ 513 (556)
.++.|++||++ ++.+..+. +.. .|.+++|+ |+ + ++|++|+.||.|++||+.+++.+..+.. .|..
T Consensus 181 -~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 181 -DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS--PDSG---EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp -TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC--STTC---CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred -CCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC--CCCC---CEEEEEeCCCeEEEEECCCCCEeEEecccccccCC
Confidence 89999999997 67777775 566 89999999 88 8 8999999999999999999999999843 6899
Q ss_pred CeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 514 PVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.|.+++|+ ++++|++++.||.|++||+.+++....+.
T Consensus 255 ~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 255 GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99999999 99999999999999999999876655543
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=6.4e-27 Score=243.76 Aligned_cols=229 Identities=11% Similarity=0.072 Sum_probs=191.9
Q ss_pred ceEEeccCCCeEEEEeCCCC-------CCcceEcCCCCCceEEEEEcCCC-CEEEEEeCCCcEEEEEeeeccCccccccc
Q psy10778 294 GMICWNECDNLIRLKMSKEL-------PATPVIRPPLGATIATATTAPDC-HTLWLGLTSGNILVYEYELNASTNKIEFC 365 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~-------~~~~~~~~~h~~~V~~i~~s~dg-~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~ 365 (556)
.++++|+.||+|++|++.++ +....+. +|...|++++|+|++ .+|++|+.||+|++||+..+
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------- 164 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------- 164 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT---------
T ss_pred CEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC---------
Confidence 38999999999999999877 3344444 799999999999998 69999999999999999865
Q ss_pred CCCeEe--eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEe-CCCCCCCC-eeEEEEeCCCCeEEEE---e
Q psy10778 366 KPPTIL--LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREI-PCVDPNTP-VSHVTMSETNGEIASV---L 438 (556)
Q Consensus 366 ~~~~~l--~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l-~~~h~~~~-V~~l~~sp~~~~i~s~---s 438 (556)
+.+..+ .+|...|++++|+|++++|++++.||.|++||+++++.+..+ .. | ... +.+++|+|++..++++ +
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~g~~~~ 242 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRP-H-EGTRPVHAVFVSEGKILTTGFSRM 242 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECS-S-CSSSCCEEEECSTTEEEEEEECTT
T ss_pred CccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccC-C-CCCcceEEEEcCCCcEEEEeccCC
Confidence 445677 789999999999999999999999999999999999999988 66 7 554 8999999999999988 5
Q ss_pred ecCcCCCCeEEEEEeC-Cc---EEEEeecCCCeEEEEEeeCCCCCcceEEE-EEeCCCeEEEEeCCCCeE-EEEecC-CC
Q psy10778 439 QTTKTGGSILRLHTIN-AQ---LITSLASELRITSVTFSNAPEGVSQNVIV-TGHSDGTIQLWSGYKLAH-LLTLNT-NV 511 (556)
Q Consensus 439 ~~~~~~d~~I~iwdi~-g~---~i~~~~~~~~i~~i~~s~~pdg~~~~~l~-tg~~dg~I~iwd~~~~~~-~~~~~~-~h 511 (556)
.++.|++||++ ++ ......+...+.+++|+ |++ ++|+ +|+.||.|++||+.+++. +..+.. .|
T Consensus 243 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~~~---~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~ 312 (402)
T 2aq5_A 243 -----SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD--PDT---NIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSS 312 (402)
T ss_dssp -----CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE--TTT---TEEEEEETTCSCEEEEEECSSTTCEEEEEEECC
T ss_pred -----CCceEEEEcCccccCCceEEeccCCCceeEEEEc--CCC---CEEEEEEcCCCeEEEEEecCCCcceEeeccccc
Confidence 79999999997 33 23344567889999999 888 6775 566899999999998773 444331 35
Q ss_pred CCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 512 ALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 512 ~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
..+|++++|+|++.++++ .++.+++|++.++..
T Consensus 313 ~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 313 KESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp SSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 689999999999988764 577999999987544
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.7e-27 Score=264.50 Aligned_cols=230 Identities=14% Similarity=0.153 Sum_probs=194.2
Q ss_pred eEEeccCCCeEEEEeCCCC--CCcceEcCCCCCceEEEEEcCC--CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKEL--PATPVIRPPLGATIATATTAPD--CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--~~~~~~~~~h~~~V~~i~~s~d--g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
++++|+.||+|++|+..++ +....+. +|.+.|++++|+++ +++|++|+.||+|++||+..+. ......
T Consensus 23 ~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~-------~~~~~~ 94 (753)
T 3jro_A 23 RLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR-------WSQIAV 94 (753)
T ss_dssp CEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE-------EEEEEE
T ss_pred eEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc-------cccccc
Confidence 7889999999999998743 3333443 79999999999988 9999999999999999998651 124567
Q ss_pred eeCCCccEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeC-------------CCCe
Q psy10778 371 LLGHSACVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSE-------------TNGE 433 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp-------------~~~~ 433 (556)
+.+|...|++++|+|+ ++.+++|+.||+|++||++++. ....+.. | ...|.+++|+| ++..
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~-~-~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA-H-AIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC-C-SSCEEEEEECCCC---------CGGGCC
T ss_pred ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec-C-CCceEEEEecCcccccccccccCCCCCE
Confidence 8899999999999999 9999999999999999998873 3445666 7 89999999999 5899
Q ss_pred EEEEeecCcCCCCeEEEEEeC-C----cEEEEe-ecCCCeEEEEEeeCCC---CCcceEEEEEeCCCeEEEEeCCCCe--
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-A----QLITSL-ASELRITSVTFSNAPE---GVSQNVIVTGHSDGTIQLWSGYKLA-- 502 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g----~~i~~~-~~~~~i~~i~~s~~pd---g~~~~~l~tg~~dg~I~iwd~~~~~-- 502 (556)
+++++ .||.|++||++ + .....+ .|...|.+++|+ |+ + +++++|+.||.|++||+.+++
T Consensus 173 l~sgs-----~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s--p~~~~~---~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 173 FVTGG-----ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLR---SYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp EEEEE-----TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSS---EEEEEEESSSCEEEEEESSSSSC
T ss_pred EEEEE-----CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec--cCCCCC---CEEEEEecCCEEEEecCCCCCCc
Confidence 99999 89999999997 3 334444 468899999999 77 7 899999999999999998764
Q ss_pred ---EEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 503 ---HLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 503 ---~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
.+.... .|...|++++|+|+|+++++|+.||.|++|++.+..
T Consensus 243 ~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 243 WKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 222222 578899999999999999999999999999998643
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.1e-27 Score=240.09 Aligned_cols=234 Identities=12% Similarity=0.070 Sum_probs=183.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe-eC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL-LG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-~~ 373 (556)
++++|+.||+|++||+.+++....+. ...|.+++++|+ +++|+.|++|++|+.......-.....+.+... .+
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 89999999999999999888776665 456778888887 999999999999986532100000000112233 36
Q ss_pred CCccEEEEEEcc--CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCA--GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~--~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
|.+.|.+++|+| +++++++|+.||+|++||+++++.+......+ ...+.+++|+|++..+++|+ .|+.|++|
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-~~~i~~~~~~pdg~~lasg~-----~dg~i~iw 197 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-DVEYSSGVLHKDSLLLALYS-----PDGILDVY 197 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-SCCCCEEEECTTSCEEEEEC-----TTSCEEEE
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-CCceEEEEECCCCCEEEEEc-----CCCEEEEE
Confidence 778999999999 99999999999999999999998877765414 56899999999999999999 89999999
Q ss_pred EeC-CcEE-EEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC--CCCCCe--EEEEEecC
Q psy10778 452 TIN-AQLI-TSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT--NVALPV--IAVTYSCD 523 (556)
Q Consensus 452 di~-g~~i-~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~--~h~~~V--~~l~~s~d 523 (556)
|++ ++.+ ..+. |...|++++|+ |+| .+|++++ ++.|++||+++++.+..+.. .|...+ .+++|+|+
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~l~fs--~~g---~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAKIKEVKFA--DNG---YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp ESSCTTSCCEECCCCTTSCEEEEEEC--TTS---SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred ECCCCCCCccEEeccCCCCEEEEEEe--CCC---CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 997 5554 4443 68999999999 899 8999999 55999999998876655441 133333 46999999
Q ss_pred CCEEEEEcC-CCcEEEEEcCCCCC
Q psy10778 524 SQHLYASNT-EGLVIIWESSSHNR 546 (556)
Q Consensus 524 g~~l~sgs~-Dg~V~vwdl~~~~~ 546 (556)
|++|++++. |+.|++|++.+..+
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEecCCCCcEEEEEEccccc
Confidence 999999988 99999999977544
No 94
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5.3e-27 Score=244.30 Aligned_cols=227 Identities=11% Similarity=0.057 Sum_probs=175.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcce--E--cCCCCCceEEEEEcC--------CCCEEEEEeCCCcEEEEEeeeccCcccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPV--I--RPPLGATIATATTAP--------DCHTLWLGLTSGNILVYEYELNASTNKI 362 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~--~--~~~h~~~V~~i~~s~--------dg~~l~tgs~Dg~I~vwd~~~~~~~~~~ 362 (556)
++++|+.|++|+||+..++..... + ..+|.+.|++++|+| |+++||+|+.|++|+|||+..+
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~------ 176 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE------ 176 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT------
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC------
Confidence 899999999999999987654321 1 237999999999997 7899999999999999999865
Q ss_pred cccCCCeEeeCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEe-------------------------CCC
Q psy10778 363 EFCKPPTILLGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREI-------------------------PCV 416 (556)
Q Consensus 363 ~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l-------------------------~~~ 416 (556)
.+...+.+|...|.+++|+|++. +|++|+.||+|++||+++++..... .+
T Consensus 177 ---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~- 252 (393)
T 4gq1_A 177 ---GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG- 252 (393)
T ss_dssp ---EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C-
T ss_pred ---ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc-
Confidence 44567788999999999999875 8999999999999999887543322 23
Q ss_pred CCCCCeeEEEEe-CCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee-c------------------CCCeEEEEEeeC
Q psy10778 417 DPNTPVSHVTMS-ETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-S------------------ELRITSVTFSNA 475 (556)
Q Consensus 417 h~~~~V~~l~~s-p~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~------------------~~~i~~i~~s~~ 475 (556)
| ...+.+++|+ +++..|++++ .|+++++||+. ++....+. + ........+++.
T Consensus 253 ~-~~~v~~v~~~~~dg~~l~s~s-----~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 253 I-ASSLANVRWIGSDGSGILAMC-----KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp C-SSSCSEEEEETTTTCEEEEEC-----TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred c-cccceeeeeecCCCCEEEEEe-----CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 5 5678899987 7899999998 89999999986 33322221 1 122233445533
Q ss_pred CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 476 PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 476 pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
.++ .++++|+.||.|++||+.+++....+. +|..+|++++|+|||++|++++.+| +.+|.+.
T Consensus 327 ~~~---~~~~sgs~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 327 YMD---YFATAHSQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CTT---EEEEEETTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCC---EEEEEECCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 455 678889999999999999998877776 6889999999999999999998766 6666654
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=3.5e-26 Score=240.44 Aligned_cols=232 Identities=12% Similarity=0.131 Sum_probs=182.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCc---------------------------------------ceEcCCCCCceEEEEEcCC
Q psy10778 295 MICWNECDNLIRLKMSKELPAT---------------------------------------PVIRPPLGATIATATTAPD 335 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~---------------------------------------~~~~~~h~~~V~~i~~s~d 335 (556)
++++|+.||+|++|+..+++.. ..+..+|...|++++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 7888999999999998753221 1223479999999999999
Q ss_pred CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCeE----E
Q psy10778 336 CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGF-SVAVSSSEDGTCLLWDINTIGY----I 410 (556)
Q Consensus 336 g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~----v 410 (556)
+++|++| .||+|++||+............ ....+.+|...|++++|+|++ .++++|+.||+|++||+++++. +
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDI-KPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEEC-CCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeec-ccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 9999999 7999999999843110000000 011366899999999999998 8999999999999999999886 7
Q ss_pred EEeCCCCCCC------------CeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--CcEEEEeecCCC----------
Q psy10778 411 REIPCVDPNT------------PVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--AQLITSLASELR---------- 466 (556)
Q Consensus 411 ~~l~~~h~~~------------~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g~~i~~~~~~~~---------- 466 (556)
..+.. | .. .|.+++|+|++.+|++++ . +.|++||++ ++++..+.....
T Consensus 267 ~~~~~-~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-----~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 267 KLFEE-P-EDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-----Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp EEECC-C------CCHHHHHTTCEEEEEECTTSSEEEEEE-----S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred eEecc-C-CCccccccccccCceEEEEEECCCCCEEEEee-----C-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 88887 6 54 899999999999999998 7 999999996 666666654332
Q ss_pred ------eEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-------------------------------
Q psy10778 467 ------ITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT------------------------------- 509 (556)
Q Consensus 467 ------i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~------------------------------- 509 (556)
+..++|+ |++ ++|++|+.||.|++||+.+++.+.....
T Consensus 339 ~~~i~~~~~~~~s--~~~---~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (447)
T 3dw8_B 339 NDCIFDKFECCWN--GSD---SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSL 413 (447)
T ss_dssp TSGGGCCCCEEEC--TTS---SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGC
T ss_pred ccccccceEEEEC--CCC---CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccccc
Confidence 3349999 899 8999999999999999998887642210
Q ss_pred CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 510 NVALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 510 ~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
.+...|.+++|+|++..|++++.++ +++|.-+
T Consensus 414 ~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 414 DFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 2345789999999999999998775 8888653
No 96
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=3.5e-26 Score=241.02 Aligned_cols=223 Identities=18% Similarity=0.259 Sum_probs=191.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++||..+++....+. +|...|.+++|++ ..+++|+.||.|++||+..+... .....+.+|
T Consensus 185 ~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~------~~~~~~~~~ 255 (435)
T 1p22_A 185 VIITGSSDSTVRVWDVNTGEMLNTLI-HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDI------TLRRVLVGH 255 (435)
T ss_dssp EEEEEETTSCEEEEESSSCCEEEEEC-CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCC------EEEEEECCC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEc-CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCc------eeeeEecCC
Confidence 89999999999999999988877776 7999999999964 59999999999999999865110 112677899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.++++ +++.+++|+.||.|++||+++++.+..+.. | ...|.+++++ +..+++++ .|+.|++||++
T Consensus 256 ~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~-~~~v~~~~~~--~~~l~~g~-----~dg~i~iwd~~ 324 (435)
T 1p22_A 256 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG-H-KRGIACLQYR--DRLVVSGS-----SDNTIRLWDIE 324 (435)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC-C-SSCEEEEEEE--TTEEEEEE-----TTSCEEEEETT
T ss_pred CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC-C-CCcEEEEEeC--CCEEEEEe-----CCCeEEEEECC
Confidence 999999999 678999999999999999999999999998 8 8999999995 67999998 89999999998
Q ss_pred -CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe---------EEEEecCCCCCCeEEEEEecC
Q psy10778 455 -AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA---------HLLTLNTNVALPVIAVTYSCD 523 (556)
Q Consensus 455 -g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~---------~~~~~~~~h~~~V~~l~~s~d 523 (556)
++.+..+. |...|.+++|. + .+|++|+.||.|++||+.+++ .+..+. +|...|++++| +
T Consensus 325 ~~~~~~~~~~h~~~v~~~~~~----~---~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~--~ 394 (435)
T 1p22_A 325 CGACLRVLEGHEELVRCIRFD----N---KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-EHSGRVFRLQF--D 394 (435)
T ss_dssp TCCEEEEECCCSSCEEEEECC----S---SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-CCSSCCCCEEE--C
T ss_pred CCCEEEEEeCCcCcEEEEEec----C---CEEEEEeCCCcEEEEECCCCCCccccccchheeecc-CCCCCeEEEEe--C
Confidence 88888775 67889999884 5 689999999999999997665 788887 89999999999 6
Q ss_pred CCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 524 SQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 524 g~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
+..|++|+.||.|++||+.+....
T Consensus 395 ~~~l~s~s~Dg~i~iwd~~~~~~~ 418 (435)
T 1p22_A 395 EFQIVSSSHDDTILIWDFLNDPAA 418 (435)
T ss_dssp SSCEEECCSSSEEEEEC-------
T ss_pred CCEEEEEeCCCEEEEEECCCCCCc
Confidence 888999999999999999885543
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=2e-25 Score=235.63 Aligned_cols=224 Identities=16% Similarity=0.241 Sum_probs=199.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||+|++|+..+++....+. +|...|.+++++ ++.+++|+.||+|++||+..+ +.+..+.+|
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~---------~~~~~~~~~ 238 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG---------QCLHVLMGH 238 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC---------CEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEEC-CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC---------cEEEEEcCC
Confidence 89999999999999999887777765 899999999995 578999999999999999876 556788999
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.++++ +++.+++|+.||.|++||+++++.+..+.. | ...|.++++ ++..+++++ .|+.|++||++
T Consensus 239 ~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~-~~~v~~~~~--~~~~l~~~~-----~d~~i~i~d~~ 307 (445)
T 2ovr_B 239 VAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG-H-TNRVYSLQF--DGIHVVSGS-----LDTSIRVWDVE 307 (445)
T ss_dssp SSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC-C-SSCEEEEEE--CSSEEEEEE-----TTSCEEEEETT
T ss_pred cccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC-C-CCceEEEEE--CCCEEEEEe-----CCCeEEEEECC
Confidence 999999999 678999999999999999999999999998 8 899999999 788999999 89999999997
Q ss_pred -CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC--CCCCCeEEEEEecCCCEEEEE
Q psy10778 455 -AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT--NVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 455 -g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sg 530 (556)
++.+..+. +...+.++.++ + +++++|+.||.|++||+.+++.+..+.. .|...|++++|+ +.+|++|
T Consensus 308 ~~~~~~~~~~~~~~v~~~~~~----~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~ 378 (445)
T 2ovr_B 308 TGNCIHTLTGHQSLTSGMELK----D---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITS 378 (445)
T ss_dssp TCCEEEEECCCCSCEEEEEEE----T---TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEE
T ss_pred CCCEEEEEcCCcccEEEEEEe----C---CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEE
Confidence 77777774 66788888876 4 6899999999999999999999999873 378899999996 6899999
Q ss_pred cCCCcEEEEEcCCCCCcCee
Q psy10778 531 NTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 531 s~Dg~V~vwdl~~~~~~~~~ 550 (556)
+.||.|++||+.+++.+..+
T Consensus 379 ~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 379 SDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp ETTSEEEEEETTTCCEEEEE
T ss_pred eCCCeEEEEECCCCceeeee
Confidence 99999999999998877665
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=2.1e-25 Score=235.56 Aligned_cols=220 Identities=18% Similarity=0.198 Sum_probs=197.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++||..+++....+. +|...|+++++ +++++++|+.||.|++||+..+ +.+..+.+|
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~ 278 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE---------TCLHTLQGH 278 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT---------EEEEEECCC
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC---------cEeEEecCC
Confidence 79999999999999999888777765 79999999999 7789999999999999998865 556788899
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...|.+++| ++..+++|+.||.|++||+++++.+..+.. | ...+.+++++ ++.+++++ .|+.|++||++
T Consensus 279 ~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~-~~~v~~~~~~--~~~l~~~~-----~dg~i~vwd~~ 347 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-H-QSLTSGMELK--DNILVSGN-----ADSTVKIWDIK 347 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECC-C-CSCEEEEEEE--TTEEEEEE-----TTSCEEEEETT
T ss_pred CCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcC-C-cccEEEEEEe--CCEEEEEe-----CCCeEEEEECC
Confidence 999999999 788999999999999999999999999998 8 8889888875 57899998 89999999996
Q ss_pred -CcEEEEee----cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec----CCCCCCeEEEEEecCCC
Q psy10778 455 -AQLITSLA----SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN----TNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 455 -g~~i~~~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~----~~h~~~V~~l~~s~dg~ 525 (556)
++.+..+. +...|.+++|+ + ++|++|+.||.|++||+.+++.+..+. .+|.+.|++++|+|++.
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~----~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN----K---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC----S---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC----C---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence 88888775 67889999997 3 689999999999999999999988882 15788999999999999
Q ss_pred EEEEEcCCCc----EEEEEcCCC
Q psy10778 526 HLYASNTEGL----VIIWESSSH 544 (556)
Q Consensus 526 ~l~sgs~Dg~----V~vwdl~~~ 544 (556)
++++|+.||. |.+||+...
T Consensus 421 ~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 421 VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEcccCCCCccEEEEEECCCC
Confidence 9999999998 999999764
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.1e-25 Score=226.61 Aligned_cols=209 Identities=11% Similarity=0.089 Sum_probs=178.2
Q ss_pred EcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEcc--CCCEEEEEcCC
Q psy10778 319 IRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCA--GFSVAVSSSED 396 (556)
Q Consensus 319 ~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~D 396 (556)
+..+|.+.|++++|+|++++|++|+.||.|++|++..+.... +....+.+|...|++++|+| ++++|++|+.|
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNW-----ELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCE-----EEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcc-----eecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 334899999999999999999999999999999998642111 23467789999999999999 58999999999
Q ss_pred CcEEEEeCCCC---------eEEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcCCCCeEEEEEeC-CcEEEEe---
Q psy10778 397 GTCLLWDINTI---------GYIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKTGGSILRLHTIN-AQLITSL--- 461 (556)
Q Consensus 397 g~I~iwdl~~~---------~~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~--- 461 (556)
|+|++||+.++ +.+..+.. | ...|.+++|+|+ +..+++++ .|+.|++||++ ++.+..+
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~~~~~l~~~~-----~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLND-S-KGSLYSVKFAPAHLGLKLACLG-----NDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECC-C-SSCEEEEEECCGGGCSEEEEEE-----TTCEEEEEECSSTTCTTCCEEE
T ss_pred CeEEEEecCCCcccccccCcceeeeecc-c-CCceeEEEEcCCCCCcEEEEec-----CCCcEEEecCCChHHhcccccc
Confidence 99999999887 56788888 8 899999999999 99999999 89999999986 3322111
Q ss_pred -----------ecCCCeEEEEEeeCCC---CCcceEEEEEeCCCeEEEEeCCCCeE--EEEecCCCCCCeEEEEEecCC-
Q psy10778 462 -----------ASELRITSVTFSNAPE---GVSQNVIVTGHSDGTIQLWSGYKLAH--LLTLNTNVALPVIAVTYSCDS- 524 (556)
Q Consensus 462 -----------~~~~~i~~i~~s~~pd---g~~~~~l~tg~~dg~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg- 524 (556)
.+...+.+++|+ |+ + ..+++++.++.+.+|+...++. +..+. +|...|++++|+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~ 227 (351)
T 3f3f_A 154 SEMKVLSIPPANHLQSDFCLSWC--PSRFSP---EKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIG 227 (351)
T ss_dssp EEEESCSCCCSSCSCCCEEEEEC--CCSSSC---CEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSS
T ss_pred ccccccccccCCcccceeEEEec--cCCCCC---cEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCC
Confidence 245789999999 65 5 8999999999998888877765 56666 799999999999998
Q ss_pred ---CEEEEEcCCCcEEEEEcCCCC
Q psy10778 525 ---QHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 525 ---~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
++|++|+.||.|++||+.++.
T Consensus 228 ~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 228 RWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp CSSEEEEEEETTSCEEEEEEEECC
T ss_pred CcceEEEEEcCCCeEEEEeCCCCc
Confidence 899999999999999998753
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=4.8e-26 Score=235.54 Aligned_cols=234 Identities=23% Similarity=0.276 Sum_probs=189.9
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCC-----CeEeeCC
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKP-----PTILLGH 374 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~-----~~~l~~h 374 (556)
.++.+++|+.+.++...... +|.+.|++++|+| ++++|++|+.||.|++|++.......... ... .....+|
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVER-IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYT-CKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHHHHHHTEEECTTEEECC-CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEE-ECEEEEECTTCTTCC
T ss_pred ccCcceeeccccCcceeeee-ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEe-ccccccccccccccC
Confidence 45667788877766665554 7999999999999 99999999999999999998762111100 000 0011369
Q ss_pred CccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCC---CeEEEEeecCcCCCCeEEE
Q psy10778 375 SACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETN---GEIASVLQTTKTGGSILRL 450 (556)
Q Consensus 375 ~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~---~~i~s~s~~~~~~d~~I~i 450 (556)
...|.+++|+| ++.++++++.||.|++||+.+++.+..+.. ...+.++++++.+ ..+++++ .++.|++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~ 170 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGT-----RGPKVQL 170 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEE-----SSSSEEE
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEc-----CCCeEEE
Confidence 99999999999 778999999999999999999998888876 6889999999854 4888888 8999999
Q ss_pred EEeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe-EEEEec--------------CCCCC
Q psy10778 451 HTIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA-HLLTLN--------------TNVAL 513 (556)
Q Consensus 451 wdi~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~-~~~~~~--------------~~h~~ 513 (556)
||++ ++.+..+. +...|.+++|+ |++. .++++|+.||.|++||++++. .+..+. .+|..
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~--~~~~--~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWS--PRYD--YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEEC--SSCT--TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred EeCCCcceeeeecCCCCcEEEEEEC--CCCC--cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC
Confidence 9997 66666664 78899999999 7772 379999999999999998765 344431 15788
Q ss_pred CeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 514 PVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
.|++++|+|++++|++++.||.|++||+.+++...
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTL 281 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCC
T ss_pred ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccce
Confidence 99999999999999999999999999999866543
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.8e-26 Score=237.37 Aligned_cols=228 Identities=14% Similarity=0.221 Sum_probs=182.8
Q ss_pred EeCCCCCCcceEcCCCCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC
Q psy10778 308 KMSKELPATPVIRPPLGATIATATTAP-DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG 386 (556)
Q Consensus 308 w~~~~~~~~~~~~~~h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~ 386 (556)
|+. +++.+..+..+|.+.|++++|+| ++++|++|+.||+|++||+...... .. .+....+ +|...|++++|+|+
T Consensus 48 w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~-~~--~~~~~~~-~h~~~v~~~~~~~~ 122 (437)
T 3gre_A 48 GNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG-EV--YSSSLTY-DCSSTVTQITMIPN 122 (437)
T ss_dssp GGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT-CC--CSCSEEE-ECSSCEEEEEECTT
T ss_pred ccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC-cc--cceeeec-cCCCCEEEEEEeCC
Confidence 553 34555566448999999999999 9999999999999999998762110 00 1222333 59999999999999
Q ss_pred CCEEEEEcCCCcEEEEeCC---CCeEEEEeCC---------C--CCCCCeeEEE--EeCCCCeEEEEeecCcCCCCeEEE
Q psy10778 387 FSVAVSSSEDGTCLLWDIN---TIGYIREIPC---------V--DPNTPVSHVT--MSETNGEIASVLQTTKTGGSILRL 450 (556)
Q Consensus 387 ~~~l~sgs~Dg~I~iwdl~---~~~~v~~l~~---------~--h~~~~V~~l~--~sp~~~~i~s~s~~~~~~d~~I~i 450 (556)
++.|++|+.||+|++||+. +++.++.... + + ...+.++. +++++..+++++ .++.|++
T Consensus 123 ~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~d~~i~i 196 (437)
T 3gre_A 123 FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGK-NEYAVRMRAFVNEEKSLLVALT-----NLSRVII 196 (437)
T ss_dssp SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSS-CCCEEEEEEEECSSCEEEEEEE-----TTSEEEE
T ss_pred CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccc-ccCceEEEEEEcCCCCEEEEEe-----CCCeEEE
Confidence 9999999999999999994 4444333221 0 1 45667776 567899999999 8999999
Q ss_pred EEeC-CcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEec----
Q psy10778 451 HTIN-AQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSC---- 522 (556)
Q Consensus 451 wdi~-g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~---- 522 (556)
||++ ++.+..+. |...|++++|+ |++ ++|++|+.||.|++||+++++++..+...|..+|++++|+|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s--~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~ 271 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICID--EEC---CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGK 271 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEEC--TTS---CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCT
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEEC--CCC---CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCC
Confidence 9997 77777775 57899999999 888 89999999999999999999999988656778999996654
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 523 DSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 523 dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
++.+|++|+.||.|++||+.+++....+.
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 67899999999999999999877655544
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.7e-25 Score=234.30 Aligned_cols=197 Identities=13% Similarity=0.120 Sum_probs=171.1
Q ss_pred CCCceEEEEEcCCCCEE-EEEeCCCcEEEEEee--eccCcccccccCCCeEee--CCCccEEEEEEccCCCEEEEEcCCC
Q psy10778 323 LGATIATATTAPDCHTL-WLGLTSGNILVYEYE--LNASTNKIEFCKPPTILL--GHSACVTDLYLCAGFSVAVSSSEDG 397 (556)
Q Consensus 323 h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~--~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~l~sgs~Dg 397 (556)
|.+.|++++|+|++++| ++|+.||.|++|++. .+ +.+..+. .|...|++++|+|++++|++|+.||
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~---------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g 171 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK---------NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFG 171 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS---------SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC---------ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCC
Confidence 44579999999999996 899999999999998 54 4445555 6778999999999999999999999
Q ss_pred cEEEEeCCCCeEEE----EeCCCCCCCCeeEEEEeCC---CCeEEEEeecCcCCCCeEEEEEeC-CcEEEEe--ecCCCe
Q psy10778 398 TCLLWDINTIGYIR----EIPCVDPNTPVSHVTMSET---NGEIASVLQTTKTGGSILRLHTIN-AQLITSL--ASELRI 467 (556)
Q Consensus 398 ~I~iwdl~~~~~v~----~l~~~h~~~~V~~l~~sp~---~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~--~~~~~i 467 (556)
.+.+|++.+++... .+.+ | ...|.+++|+|+ +.+|++++ .|+.|++||++ ++.+..+ .|...|
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~~~-h-~~~v~~~~~sp~~~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 172 DVYSIDINSIPEEKFTQEPILG-H-VSMLTDVHLIKDSDGHQFIITSD-----RDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp EEEEEETTSCCCSSCCCCCSEE-C-SSCEEEEEEEECTTSCEEEEEEE-----TTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred cEEEEecCCcccccccceeeec-c-cCceEEEEEcCCCCCCcEEEEEc-----CCCcEEEEECCCCceeeeeecCCCCce
Confidence 99999998876543 6667 8 889999999999 88999999 89999999997 6666653 478899
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC------------------------CCCCCeEEEEEecC
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT------------------------NVALPVIAVTYSCD 523 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~------------------------~h~~~V~~l~~s~d 523 (556)
.+++|+ ++ ++|++|+.|+.|++||+.+++.+..+.. .....|.+++|+|+
T Consensus 245 ~~~~~s---d~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 245 SSICCG---KD---YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp EEEEEC---ST---TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred EEEEEC---CC---CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 999998 56 7999999999999999999998888752 12357999999999
Q ss_pred CCEEEEEc-CCCcEEEEEc
Q psy10778 524 SQHLYASN-TEGLVIIWES 541 (556)
Q Consensus 524 g~~l~sgs-~Dg~V~vwdl 541 (556)
+++|++++ .|+.|++|++
T Consensus 319 ~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 319 LPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSEEEEEETTCSEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEe
Confidence 99999998 8999999999
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=227.83 Aligned_cols=213 Identities=13% Similarity=0.157 Sum_probs=171.5
Q ss_pred CCCCceEEEEEcCC---CCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCc
Q psy10778 322 PLGATIATATTAPD---CHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGT 398 (556)
Q Consensus 322 ~h~~~V~~i~~s~d---g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~ 398 (556)
+|.+.|++++|+|+ |++|++|+.||.|++|++.... . .....+.+|...|++++|+|++++|++++.||.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~---~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---Q----TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS---C----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC---c----eeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 79999999999999 6999999999999999998631 0 122678899999999999999999999999999
Q ss_pred EEEEeCCCCeEEEEeCCCCCCCCeeEEEE--eCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC----------
Q psy10778 399 CLLWDINTIGYIREIPCVDPNTPVSHVTM--SETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASEL---------- 465 (556)
Q Consensus 399 I~iwdl~~~~~v~~l~~~h~~~~V~~l~~--sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~---------- 465 (556)
|++||+.+++.+... . | ...|.+++| ++++..+++++ .|+.|++||++ ++.+..+....
T Consensus 110 v~iwd~~~~~~~~~~-~-~-~~~v~~~~~~~~~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIA-Q-H-DAPVKTIHWIKAPNYSCVMTGS-----WDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp EEEEETTTTEEEEEE-E-C-SSCEEEEEEEECSSCEEEEEEE-----TTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred EEEEEcCCCCceeec-c-c-cCceEEEEEEeCCCCCEEEEcc-----CCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 999999998877754 4 6 899999999 88999999999 89999999986 55444443222
Q ss_pred --------------------------------CeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC---eEEEEecCC
Q psy10778 466 --------------------------------RITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL---AHLLTLNTN 510 (556)
Q Consensus 466 --------------------------------~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~---~~~~~~~~~ 510 (556)
...++++...... ....+++|+.||.|++||+... +.+..+. +
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~-~ 259 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN-KPTGFALGSIEGRVAIHYINPPNPAKDNFTFK-C 259 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS-CEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-C
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC-CCCeEEEecCCCcEEEEecCCCCccccceeee-e
Confidence 2334444421211 0134999999999999999876 4556665 5
Q ss_pred CCC------------CeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 511 VAL------------PVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 511 h~~------------~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
|.. +|++++|+|++++|++|+.||.|++||+.+++.+..+.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 544 79999999999999999999999999999876655544
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=7.6e-25 Score=248.31 Aligned_cols=230 Identities=14% Similarity=0.129 Sum_probs=201.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.||.|++|+..+++....+. +|.+.|++++|+|++++|++|+.||+|++|++..+. .....+.+|
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--------~~~~~~~~~ 139 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--------ALEQTFEGH 139 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--------EEEEEEECC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--------eEEEEEcCC
Confidence 89999999999999999988777775 799999999999999999999999999999987541 234678899
Q ss_pred CccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC--CCCeEEEEeecCcCCCCeEEEE
Q psy10778 375 SACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE--TNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 375 ~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp--~~~~i~s~s~~~~~~d~~I~iw 451 (556)
...|.+++|+| ++..+++++.||+|++||+.+++....+.. +....+.+++|+| ++..+++++ .++.|++|
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~-----~dg~i~~~ 213 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITAS-----DDLTIKIW 213 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEEC-----TTSEEEEE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEe-----CCCEEEEE
Confidence 99999999999 888999999999999999998887777766 4148999999999 899999999 89999999
Q ss_pred EeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCE-EE
Q psy10778 452 TIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQH-LY 528 (556)
Q Consensus 452 di~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~-l~ 528 (556)
|++ ++.+..+. +...|.+++|+ |++ +++++|+.||.|++||+.+++.+..+. .|...+.+++|+|++.. ++
T Consensus 214 d~~~~~~~~~~~~~~~~v~~~~~~--~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 214 DYQTKSCVATLEGHMSNVSFAVFH--PTL---PIIISGSEDGTLKIWNSSTYKVEKTLN-VGLERSWCIATHPTGRKNYI 287 (814)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEEC--SSS---SEEEEEETTSCEEEEETTTCSEEEEEC-CSSSSEEEEEECTTCGGGEE
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEc--CCC---CEEEEEeCCCeEEEEECCCCcEEEEee-cCCCcEEEEEEccCCCceEE
Confidence 997 77777775 67899999999 899 899999999999999999999999998 68899999999999863 24
Q ss_pred EEcCCCcEEEEEcCCCC
Q psy10778 529 ASNTEGLVIIWESSSHN 545 (556)
Q Consensus 529 sgs~Dg~V~vwdl~~~~ 545 (556)
+++.++.+.+|++....
T Consensus 288 ~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 288 ASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp EEEETTEEEEEECSCCS
T ss_pred EEEeCCCEEEEEcCCCC
Confidence 44557779999987644
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=8.9e-25 Score=238.95 Aligned_cols=230 Identities=10% Similarity=0.112 Sum_probs=201.2
Q ss_pred ceEEeccCCCeEEEEeCCCC--------CCcceEcCCCCCceEEEEEcCCCCEEEEEeCC----CcEEEEEeeeccCccc
Q psy10778 294 GMICWNECDNLIRLKMSKEL--------PATPVIRPPLGATIATATTAPDCHTLWLGLTS----GNILVYEYELNASTNK 361 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~--------~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D----g~I~vwd~~~~~~~~~ 361 (556)
.++++|+.||.|++|+..++ +....+. .|...|.+++|+|++++|++++.+ +.|++|+. +
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~----- 150 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--G----- 150 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--C-----
T ss_pred CEEEEecCCCEEEEEeCCCCcccccccccccchhh-cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--C-----
Confidence 38999999999999999744 3334443 689999999999999999999987 68888882 2
Q ss_pred ccccCCCeEeeCCCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCC---CeeEEEEeCC-CCeEEE
Q psy10778 362 IEFCKPPTILLGHSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCVDPNT---PVSHVTMSET-NGEIAS 436 (556)
Q Consensus 362 ~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~---~V~~l~~sp~-~~~i~s 436 (556)
+.+..+.+|...|++++|+|+++ .+++++.||.|++||+.+++.+..+.. | .. .|.+++|+|+ +..+++
T Consensus 151 ----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 151 ----NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT-H-HKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp ----CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS-S-SCTTCCEEEEEECSTTCCEEEE
T ss_pred ----CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc-c-CCCCceEEEEEECCCCCCEEEE
Confidence 34577889999999999999998 899999999999999999999999998 8 77 8999999999 999999
Q ss_pred EeecCcCCCCeEEEEEeC-CcEEEEe-----ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC
Q psy10778 437 VLQTTKTGGSILRLHTIN-AQLITSL-----ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN 510 (556)
Q Consensus 437 ~s~~~~~~d~~I~iwdi~-g~~i~~~-----~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~ 510 (556)
++ .++.|++||++ ++.+..+ .+...|.+++|+ ++ ++|++++.||.|++||+.+++.+..+. .
T Consensus 225 ~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~-~ 292 (615)
T 1pgu_A 225 VG-----SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL---DS---QKFATVGADATIRVWDVTTSKCVQKWT-L 292 (615)
T ss_dssp EE-----TTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES---SS---SEEEEEETTSEEEEEETTTTEEEEEEE-C
T ss_pred Ee-----CCCeEEEEECCCCCEeEEecccccccCCceEEEEEc---CC---CEEEEEcCCCcEEEEECCCCcEEEEEc-C
Confidence 99 89999999997 8888888 678899999998 55 799999999999999999999999887 3
Q ss_pred C----CCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 511 V----ALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 511 h----~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
+ ...+.++.|+ ++..+++++.||.|++||+.+++.+..+
T Consensus 293 ~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~ 335 (615)
T 1pgu_A 293 DKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTI 335 (615)
T ss_dssp CTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEE
T ss_pred CCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEE
Confidence 3 4678888886 8899999999999999999875554443
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=4.6e-25 Score=220.74 Aligned_cols=198 Identities=14% Similarity=0.119 Sum_probs=150.0
Q ss_pred ceEEEEEcCC----CCEEEEEeC--------------------CCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEE
Q psy10778 326 TIATATTAPD----CHTLWLGLT--------------------SGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDL 381 (556)
Q Consensus 326 ~V~~i~~s~d----g~~l~tgs~--------------------Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l 381 (556)
.|++++++|+ ++.+++++. |+.|++|++... + +.+..+.+|...++.+
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d---G-----~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED---G-----GGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT---S-----CEEEEEEECCCSSCEE
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC---C-----ceeeeeccCCCceeeE
Confidence 6788888999 888887664 666777776331 0 3345677888888888
Q ss_pred EEcc---CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC---CCeeEEEEeCCCCeEEEEeec-------CcCCCCeE
Q psy10778 382 YLCA---GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPN---TPVSHVTMSETNGEIASVLQT-------TKTGGSIL 448 (556)
Q Consensus 382 ~~s~---~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~---~~V~~l~~sp~~~~i~s~s~~-------~~~~d~~I 448 (556)
+|++ ++.+|+||+.|++|+|||+.+++.++++.. | . ..+.+++|+|++..+++++.+ .++.|++|
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g-~-~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI-D-DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC-C-C---CCCEEEEEEETTEEEEEEC------------CCEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC-C-CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE
Confidence 8888 678999999999999999999999999986 4 3 357788999999887543310 01289999
Q ss_pred EEEEeC-CcEEEEee------cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeE-EEEE
Q psy10778 449 RLHTIN-AQLITSLA------SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVI-AVTY 520 (556)
Q Consensus 449 ~iwdi~-g~~i~~~~------~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~-~l~~ 520 (556)
++||.+ ++.+..+. +...+.+..++ + .++++|+.||+|+|||+.+++++.++. +|...+. +++|
T Consensus 263 klWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s----g---~~lASgS~DgTIkIWDl~tGk~l~tL~-gH~~~vvs~vaf 334 (356)
T 2w18_A 263 IVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK----D---HCAAAILTSGTIAIWDLLLGQCTALLP-PVSDQHWSFVKW 334 (356)
T ss_dssp EEEETTTTEEEEEEEECCCTTCCCCEEEEEEE----T---TEEEEEETTSCEEEEETTTCSEEEEEC-CC--CCCCEEEE
T ss_pred EEEECCCCEEEEEEEeeccCCCcceeEccccC----C---CEEEEEcCCCcEEEEECCCCcEEEEec-CCCCCeEEEEEE
Confidence 999997 66665542 22334333333 5 689999999999999999999999998 6766554 6899
Q ss_pred ecCCCEEEEEcCCCcEEEEEc
Q psy10778 521 SCDSQHLYASNTEGLVIIWES 541 (556)
Q Consensus 521 s~dg~~l~sgs~Dg~V~vwdl 541 (556)
+|||++|++|+.|++|+|||+
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999996
No 107
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=8.3e-25 Score=259.74 Aligned_cols=239 Identities=13% Similarity=0.163 Sum_probs=203.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccccc-----------
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIE----------- 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~----------- 363 (556)
++++|+.||.|++||..+++....+. +|.+.|++++|+|+++++++|+.||+|++||+..+.......
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 793 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDP 793 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC------
T ss_pred EEEEEeCCCeEEEEECCCcchhheec-CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCc
Confidence 78999999999999999988777765 899999999999999999999999999999986542100000
Q ss_pred ----------------------------------ccCCCeE-eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe
Q psy10778 364 ----------------------------------FCKPPTI-LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG 408 (556)
Q Consensus 364 ----------------------------------~~~~~~~-l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~ 408 (556)
....... ..+|...|.+++|+|+++.+++++.||.|++||+.++.
T Consensus 794 ~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 794 PEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp --CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE
T ss_pred cccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 0001111 23789999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc-------E-----------------------E
Q psy10778 409 YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ-------L-----------------------I 458 (556)
Q Consensus 409 ~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~-------~-----------------------i 458 (556)
.+..+.+ | ...|.+++|+|++..+++++ .|+.|++|++... . +
T Consensus 874 ~~~~~~~-h-~~~v~~v~~spdg~~l~s~s-----~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1249)
T 3sfz_A 874 KVADCRG-H-LSWVHGVMFSPDGSSFLTAS-----DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGL 946 (1249)
T ss_dssp EEEEECC-C-SSCEEEEEECTTSSEEEEEE-----TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSE
T ss_pred eeeecCC-C-ccceEEEEECCCCCEEEEEe-----CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcce
Confidence 9999999 9 89999999999999999999 8999999996410 0 0
Q ss_pred E---------EeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 459 T---------SLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 459 ~---------~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
. .......+.+++|+ |++ +++++|+.+|.|++||+.+++....+. +|...|++++|+|++++|++
T Consensus 947 ~~~~~~~~~~~~~~~~~i~~~~~s--p~g---~~l~~g~~~g~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s 1020 (1249)
T 3sfz_A 947 QLIAGKTGQIDYLPEAQVSCCCLS--PHL---EYVAFGDEDGAIKIIELPNNRVFSSGV-GHKKAVRHIQFTADGKTLIS 1020 (1249)
T ss_dssp EEEEESSCCEEEECCSCEEEEEEC--TTS---SEEEEEETTSCCEEEETTTTSCEEECC-CCSSCCCCEEECSSSSCEEE
T ss_pred EEEecCcceEEEcccCcEEEEEEc--CCC---CEEEEEcCCCCEEEEEcCCCceeeecc-cCCCceEEEEECCCCCEEEE
Confidence 0 01124578999999 899 899999999999999999999998887 89999999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCc
Q psy10778 530 SNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~ 547 (556)
++.||.|++||+.+++..
T Consensus 1021 ~~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 1021 SSEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp ECSSSBEEEEETTTTEEE
T ss_pred EcCCCEEEEEECCCCceE
Confidence 999999999999886543
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-24 Score=231.12 Aligned_cols=261 Identities=12% Similarity=0.009 Sum_probs=195.8
Q ss_pred ccCCCCCcceeEeeccCCeEeeecceeeeeeeccCcccccccccccccCCcc-eEEeccCCCeEEEEeCCCCCCcceEcC
Q psy10778 243 KHKHRNPVSKLVPLRTNDVFGLAKFTTLLHSYHKDKNTNLISSLNVIGAGAG-MICWNECDNLIRLKMSKELPATPVIRP 321 (556)
Q Consensus 243 ~~~~~~~i~~l~~l~~~~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~l~~gs~Dg~I~lw~~~~~~~~~~~~~ 321 (556)
+++....+.++...++|...+-......+.. .+.. ..+ .+.... +-+.=+.||.++.|++.+++....+..
T Consensus 11 ~~~~~~~v~sv~~SpDG~~iASas~D~TV~d--~~~~-~~l-----~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~ 82 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDGTLYLTTFPDISIGQ--PKYA-KDI-----NCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS 82 (588)
T ss_dssp SCCCSSSSCCEEECTTSCEEEECSSSEEEEE--ECCC-SCC-----SSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT
T ss_pred HhHhhccEEEEEECCCCCEEEEEcCCceeec--cccc-cee-----cCCCccEEEEEECCCCCcceEEEEeCCCceEeec
Confidence 3455666777777778877665443333221 1100 000 010000 222225677777777776665555555
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCc-----cEEEEEEccCCCEEEEEcCC
Q psy10778 322 PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSA-----CVTDLYLCAGFSVAVSSSED 396 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~-----~V~~l~~s~~~~~l~sgs~D 396 (556)
.|.+.|.+++|+|+|++||+++.||+|++|+... .+..+. |.. .|.+++|||+|++|++|+.|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC
Confidence 7788999999999999999999999999999532 234455 655 59999999999999999999
Q ss_pred CcEEEEeCCCCe-------EEEEe----CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcE----EEEe
Q psy10778 397 GTCLLWDINTIG-------YIREI----PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQL----ITSL 461 (556)
Q Consensus 397 g~I~iwdl~~~~-------~v~~l----~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~----i~~~ 461 (556)
|+|++||+.+++ .+.++ .+ | ...|.+++|+|+| +++++ .|+.|++||+++.. ..++
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~g-h-~~~V~sVawSPdg--Laass-----~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAG-S-KDWVTHIVWYEDV--LVAAL-----SNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTT-C-CCCEEEEEEETTE--EEEEE-----TTCCEEEECCCSSSSCCCEEEE
T ss_pred CEEEEEECCCCccccccceeeeeeeccccc-c-cccEEEEEEcCCc--EEEEe-----CCCeEEEEECCCCccccceeee
Confidence 999999999875 36776 55 7 6899999999998 77777 89999999997433 2344
Q ss_pred --ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEE--ecCCCEEEEEcCCCcEE
Q psy10778 462 --ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTY--SCDSQHLYASNTEGLVI 537 (556)
Q Consensus 462 --~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~--s~dg~~l~sgs~Dg~V~ 537 (556)
.|...|.+++|+ | ..|++++ +|+|++||+.+++...... +|...|.+++| +||+..++++++||+ +
T Consensus 222 ~~~h~~~V~svaFs----g---~~LASa~-~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-k 291 (588)
T 2j04_A 222 QNASRRKITDLKIV----D---YKVVLTC-PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-K 291 (588)
T ss_dssp ECCCSSCCCCEEEE----T---TEEEEEC-SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-E
T ss_pred cccccCcEEEEEEE----C---CEEEEEe-CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-E
Confidence 356789999998 3 5888887 6999999998877744443 69999999999 999999999999999 9
Q ss_pred EEEcC
Q psy10778 538 IWESS 542 (556)
Q Consensus 538 vwdl~ 542 (556)
+|...
T Consensus 292 lw~~d 296 (588)
T 2j04_A 292 VLLED 296 (588)
T ss_dssp EEESS
T ss_pred EEeec
Confidence 99986
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=5.7e-24 Score=219.83 Aligned_cols=229 Identities=11% Similarity=0.104 Sum_probs=192.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEE-EEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTL-WLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++++.|+.|++||..+++....+. .| ..+.+++|+|+++++ ++++.|++|++||+.++ +.+..+..
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~---------~~~~~~~~ 72 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIP-VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN---------NVIATVPA 72 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE-CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---------EEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEee-cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCC---------eEEEEEEC
Confidence 78889999999999999887776665 34 568999999999977 67779999999998765 33455555
Q ss_pred CCccEEEEEEccCCCEE-EEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeE-EEEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCAGFSVA-VSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEI-ASVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l-~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i-~s~s~~~~~~d~~I~iw 451 (556)
+. .+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++ .++.|++|
T Consensus 73 ~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~ 143 (391)
T 1l0q_A 73 GS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNN-----GDKTVSVI 143 (391)
T ss_dssp SS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEET-----TTTEEEEE
T ss_pred CC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC---CCCcceEEECCCCCEEEEEeC-----CCCEEEEE
Confidence 54 89999999999976 5666789999999999999888887 4678999999999988 4555 78999999
Q ss_pred EeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 452 TIN-AQLITSLASELRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 452 di~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
|++ ++.+..+.....+.+++|+ |++ +.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|+++.|++
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~~~--~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~ 216 (391)
T 1l0q_A 144 NTVTKAVINTVSVGRSPKGIAVT--PDG---TKVYVANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYV 216 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEEC--TTS---SEEEEEETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEE
T ss_pred ECCCCcEEEEEecCCCcceEEEC--CCC---CEEEEEeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEE
Confidence 997 7788887777888999999 888 555 678889999999999999888886 4578999999999999998
Q ss_pred Ec---CCCcEEEEEcCCCCCcCee
Q psy10778 530 SN---TEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 530 gs---~Dg~V~vwdl~~~~~~~~~ 550 (556)
++ .++.|++||+.+++.+..+
T Consensus 217 ~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 217 TNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEECSSCCEEEEEETTTTEEEEEE
T ss_pred EecCcCCCcEEEEECCCCeEEEEE
Confidence 88 6899999999887655444
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.3e-25 Score=246.82 Aligned_cols=205 Identities=19% Similarity=0.188 Sum_probs=179.1
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC--CCEEEEEcCCCc
Q psy10778 321 PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG--FSVAVSSSEDGT 398 (556)
Q Consensus 321 ~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~ 398 (556)
.+|.+.|++++|+|++++|++|+.||+|++|++..+. ......+.+|.+.|++++|+++ ++.+++|+.||+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 3899999999999999999999999999999997320 0445788999999999999988 899999999999
Q ss_pred EEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCC--CCeEEEEeecCcCCCCeEEEEEeCCc----EEEEeecCCCeEEE
Q psy10778 399 CLLWDINTIG--YIREIPCVDPNTPVSHVTMSET--NGEIASVLQTTKTGGSILRLHTINAQ----LITSLASELRITSV 470 (556)
Q Consensus 399 I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~--~~~i~s~s~~~~~~d~~I~iwdi~g~----~i~~~~~~~~i~~i 470 (556)
|++||+.+++ .+..+.. | ...|.+++|+|+ +..+++++ .|+.|++||++.. ......+...|.++
T Consensus 79 I~vwd~~~~~~~~~~~~~~-h-~~~V~~v~~sp~~~~~~l~sgs-----~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAV-H-SASVNSVQWAPHEYGPLLLVAS-----SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp EEEEEEETTEEEEEEEECC-C-SSCEEEEEECCGGGCSEEEEEE-----TTSEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred EEEEECCCCcccccccccC-C-CCCeEEEEECCCCCCCEEEEEe-----CCCcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 9999999886 6778888 8 899999999999 99999999 8999999999732 23333578899999
Q ss_pred EEeeCC-------------CCCcceEEEEEeCCCeEEEEeCCCC----eEEEEecCCCCCCeEEEEEecC---CCEEEEE
Q psy10778 471 TFSNAP-------------EGVSQNVIVTGHSDGTIQLWSGYKL----AHLLTLNTNVALPVIAVTYSCD---SQHLYAS 530 (556)
Q Consensus 471 ~~s~~p-------------dg~~~~~l~tg~~dg~I~iwd~~~~----~~~~~~~~~h~~~V~~l~~s~d---g~~l~sg 530 (556)
+|+ | ++ .++++|+.||.|++||++++ .....+. +|..+|++++|+|+ +++|++|
T Consensus 152 ~~~--p~~~~~~~~~~~~~d~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 152 SWA--PATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp EEC--CCC---------CGGG---CCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEE
T ss_pred Eec--CcccccccccccCCCC---CEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEE
Confidence 999 5 46 79999999999999999876 5566676 79999999999999 8999999
Q ss_pred cCCCcEEEEEcCCCC
Q psy10778 531 NTEGLVIIWESSSHN 545 (556)
Q Consensus 531 s~Dg~V~vwdl~~~~ 545 (556)
+.||.|++||+.++.
T Consensus 226 s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ESSSCEEEEEESSSS
T ss_pred ecCCEEEEecCCCCC
Confidence 999999999998853
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.1e-24 Score=227.14 Aligned_cols=230 Identities=12% Similarity=0.075 Sum_probs=189.5
Q ss_pred eEEeccCCCeEEEEeCC--CCCCcceEcC-CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNECDNLIRLKMSK--ELPATPVIRP-PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~--~~~~~~~~~~-~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
++++|+.||.|++|++. +++....+.. .|...|++++|+|++++|++|+.||.|++|++....... .....+
T Consensus 117 l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-----~~~~~~ 191 (450)
T 2vdu_B 117 LIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK-----FTQEPI 191 (450)
T ss_dssp EEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-----CCCCCS
T ss_pred EEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-----ccceee
Confidence 45899999999999998 7776666542 467899999999999999999999999999987651110 133467
Q ss_pred eCCCccEEEEEEccC---CCEEEEEcCCCcEEEEeCCCCeEEEE-eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCe
Q psy10778 372 LGHSACVTDLYLCAG---FSVAVSSSEDGTCLLWDINTIGYIRE-IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~---~~~l~sgs~Dg~I~iwdl~~~~~v~~-l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~ 447 (556)
.+|...|++++|+|+ +++|++|+.|++|++||+.+++.+.. +.+ | ...|.+++|+ ++.+|++++ .|+.
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-h-~~~v~~~~~s-d~~~l~s~~-----~d~~ 263 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG-H-KHFVSSICCG-KDYLLLSAG-----GDDK 263 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC-C-SSCEEEEEEC-STTEEEEEE-----SSSE
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC-C-CCceEEEEEC-CCCEEEEEe-----CCCe
Confidence 899999999999999 99999999999999999999988877 556 8 8999999999 999999999 8999
Q ss_pred EEEEEeC-CcEEEEeec--------------------------CCCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeC-
Q psy10778 448 LRLHTIN-AQLITSLAS--------------------------ELRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSG- 498 (556)
Q Consensus 448 I~iwdi~-g~~i~~~~~--------------------------~~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~- 498 (556)
|++||++ ++.+..+.. ...+.+++|+ |++ ++|++++ .++.|++|++
T Consensus 264 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~~---~~l~~~~~~d~~i~iw~~~ 338 (450)
T 2vdu_B 264 IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS--KNL---PFVAFFVEATKCIIILEMS 338 (450)
T ss_dssp EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC--SSS---SEEEEEETTCSEEEEEEEC
T ss_pred EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe--CCC---CEEEEEECCCCeEEEEEec
Confidence 9999997 777776642 2468999999 888 8898888 8999999999
Q ss_pred -CCC---eEEEEecCCCCCCeEEEEEecCCCEEEEEcC------CCcEEEEEcCCC
Q psy10778 499 -YKL---AHLLTLNTNVALPVIAVTYSCDSQHLYASNT------EGLVIIWESSSH 544 (556)
Q Consensus 499 -~~~---~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~------Dg~V~vwdl~~~ 544 (556)
.++ +.+..+. .+ ..|.+++|+|++.++++++. +..|.+|.+...
T Consensus 339 ~~~~~~l~~~~~~~-~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 339 EKQKGDLALKQIIT-FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSSTTCEEEEEEEE-CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred cCCCCceeeccEec-cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 555 6777777 55 88999999996543433333 456889987653
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=2.1e-24 Score=218.22 Aligned_cols=225 Identities=10% Similarity=0.018 Sum_probs=184.0
Q ss_pred eEEeccCCCeEEEEeC-CCCCCcceEcCC--CCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNECDNLIRLKMS-KELPATPVIRPP--LGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~-~~~~~~~~~~~~--h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
++++|+.||.|++|++ .+++. ..+ .+ |...|++++|+| ++.|++|+.||.|++||+............+++..+
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~-~~~-~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 147 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSF-QAL-TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSE-EEC-BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred EEEEEcCCCeEEEEEeccCCce-Eec-cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE
Confidence 6889999999999999 77654 233 36 999999999999 999999999999999998861000000000344445
Q ss_pred eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC-Ce--EEEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCe
Q psy10778 372 LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT-IG--YIREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~-~~--~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~ 447 (556)
. |...|.+++|++++ +++++.||.|++||+++ +. ....... | ...+.+++|+| ++..+++++ .++.
T Consensus 148 ~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~-~~~i~~i~~~~~~~~~l~~~~-----~dg~ 217 (342)
T 1yfq_A 148 K-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESG-L-KYQIRDVALLPKEQEGYACSS-----IDGR 217 (342)
T ss_dssp S-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECS-C-SSCEEEEEECSGGGCEEEEEE-----TTSE
T ss_pred e-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecC-C-CCceeEEEECCCCCCEEEEEe-----cCCc
Confidence 5 88999999999887 99999999999999998 54 3334444 6 78999999999 999999999 8999
Q ss_pred EEEEEeC-C------cEEEEee-cC---------CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC
Q psy10778 448 LRLHTIN-A------QLITSLA-SE---------LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN 510 (556)
Q Consensus 448 I~iwdi~-g------~~i~~~~-~~---------~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~ 510 (556)
|++|+++ + +....+. +. ..|.+++|+ |++ ++|++|+.||.|++||+.+++.+..+. +
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~-~ 291 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS--PRH---KFLYTAGSDGIISCWNLQTRKKIKNFA-K 291 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC--TTT---CCEEEEETTSCEEEEETTTTEEEEECC-C
T ss_pred EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc--CCC---CEEEEecCCceEEEEcCccHhHhhhhh-c
Confidence 9999996 3 4455553 33 389999999 888 899999999999999999999999998 6
Q ss_pred C-CCCeEEEEEecCCCEEEEEcCCCc-EEEEE
Q psy10778 511 V-ALPVIAVTYSCDSQHLYASNTEGL-VIIWE 540 (556)
Q Consensus 511 h-~~~V~~l~~s~dg~~l~sgs~Dg~-V~vwd 540 (556)
| ..+|++++ |++++|++++.||. .+.|.
T Consensus 292 ~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 292 FNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp CSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 7 99999999 99999999999998 54444
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=5.6e-25 Score=231.68 Aligned_cols=229 Identities=20% Similarity=0.243 Sum_probs=180.0
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCC-CCEEEEEeCCCcEEEEEeeeccCccc-ccccCCCeEeeCCCccEEE
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPD-CHTLWLGLTSGNILVYEYELNASTNK-IEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~d-g~~l~tgs~Dg~I~vwd~~~~~~~~~-~~~~~~~~~l~~h~~~V~~ 380 (556)
+.+..+...+++........|.+.|++++|+|+ +.+|++|+.||.|++|++........ .....+...+.+|...|++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 186 (430)
T 2xyi_A 107 GEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYG 186 (430)
T ss_dssp -----------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCC
T ss_pred cccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEE
Confidence 333333333444433334479999999999997 78999999999999999976311110 0112567889999999999
Q ss_pred EEEccCCC-EEEEEcCCCcEEEEeCCCCeE-------EEEeCCCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCeEEEE
Q psy10778 381 LYLCAGFS-VAVSSSEDGTCLLWDINTIGY-------IREIPCVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 381 l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~-------v~~l~~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~I~iw 451 (556)
++|+|++. +|++|+.||+|++||+.++.. ...+.. | ...|.+++|+| ++..+++++ .++.|++|
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h-~~~v~~v~~~p~~~~~l~s~~-----~dg~i~i~ 259 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-H-TAVVEDVAWHLLHESLFGSVA-----DDQKLMIW 259 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-C-SSCEEEEEECSSCTTEEEEEE-----TTSEEEEE
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-C-CCCEeeeEEeCCCCCEEEEEe-----CCCeEEEE
Confidence 99999998 999999999999999987321 456667 8 89999999999 567788888 89999999
Q ss_pred EeC-C---cEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-CeEEEEecCCCCCCeEEEEEecCCC
Q psy10778 452 TIN-A---QLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-LAHLLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 452 di~-g---~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-~~~~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
|++ + +.+..+ .|...|++++|+ |++. .++++|+.||.|++||+++ .+.+..+. .|...|++++|+|+++
T Consensus 260 d~~~~~~~~~~~~~~~~~~~v~~i~~~--p~~~--~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDAHTAEVNCLSFN--PYSE--FILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNE 334 (430)
T ss_dssp ETTCSCSSSCSEEEECCSSCEEEEEEC--SSCT--TEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCT
T ss_pred ECCCCCCCcceeEeecCCCCeEEEEeC--CCCC--CEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCC
Confidence 997 3 355555 578899999999 7762 4799999999999999987 56677887 7899999999999984
Q ss_pred -EEEEEcCCCcEEEEEcCC
Q psy10778 526 -HLYASNTEGLVIIWESSS 543 (556)
Q Consensus 526 -~l~sgs~Dg~V~vwdl~~ 543 (556)
+|++++.||.|++||+..
T Consensus 335 ~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCcEEEEeCCC
Confidence 799999999999999987
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.9e-23 Score=219.01 Aligned_cols=240 Identities=11% Similarity=0.011 Sum_probs=200.8
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEc----CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIR----PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~----~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
.+++.++.|+.|++||..+++...... .+|...|.+++|+++++++++++.|+.|++||+..+ +.+.
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~---------~~~~ 205 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL---------AYKA 205 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC---------CEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc---------eEEE
Confidence 378888899999999999887665322 268889999999999999999999999999998765 4556
Q ss_pred EeeCCCccEEEEEEccCCCEE-EEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCc---CCC
Q psy10778 370 ILLGHSACVTDLYLCAGFSVA-VSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTK---TGG 445 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~~~l-~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~---~~d 445 (556)
.+..|...+.+++|+|+++.+ ++++.|+.|++||+++++.+..+.. ...+.+++|+|+++.+++++.... ..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 778899999999999999977 5666899999999999999888887 467999999999999988873211 027
Q ss_pred CeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCC
Q psy10778 446 SILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDS 524 (556)
Q Consensus 446 ~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg 524 (556)
+.|++||++ ++.+....+...+.+++|+ |++. .++++++.++.|++||+.+++.+..+. +...+.+++|+|++
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~g~--~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg 356 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPGNKRHIVSG--NTEN--KIYVSDMCCSKIEVYDLKEKKVQKSIP--VFDKPNTIALSPDG 356 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEECEEEEEEC--SSTT--EEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTS
T ss_pred CeEEEEECCCCcEEeeccCCCCcceEEEC--CCCC--EEEEEecCCCEEEEEECCCCcEEEEec--CCCCCCeEEEcCCC
Confidence 899999997 7777777777789999999 7872 356777899999999999999888886 56889999999999
Q ss_pred CEEEEEcC---------------CCcEEEEEcCCCCCcCeee
Q psy10778 525 QHLYASNT---------------EGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 525 ~~l~sgs~---------------Dg~V~vwdl~~~~~~~~~~ 551 (556)
+.+++++. ||.|++||+.+++.+..+.
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec
Confidence 99888876 5799999998876655443
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.3e-24 Score=246.09 Aligned_cols=245 Identities=12% Similarity=0.088 Sum_probs=191.5
Q ss_pred cceEEeccCCCeEEEEeCCCCCCcc--eEc--------CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccc-
Q psy10778 293 AGMICWNECDNLIRLKMSKELPATP--VIR--------PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNK- 361 (556)
Q Consensus 293 ~~~l~~gs~Dg~I~lw~~~~~~~~~--~~~--------~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~- 361 (556)
..++++|+.|++|++||..++.... .+. .+|...|++++|+|+|++||+|+.||+|+||++.++...+.
T Consensus 447 g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~ 526 (902)
T 2oaj_A 447 GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVE 526 (902)
T ss_dssp EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC----
T ss_pred CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCcc
Confidence 3489999999999999998875321 111 16889999999999999999999999999999987621000
Q ss_pred ------c-----------------------------cccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10778 362 ------I-----------------------------EFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT 406 (556)
Q Consensus 362 ------~-----------------------------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~ 406 (556)
. ...+++..+.+|.+.|++++|+|+| +||+|+.||+|++||+++
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 527 NRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp -----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred ccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 0 0002356788999999999999999 999999999999999988
Q ss_pred CeEEE--E---eC-CCCCCCCeeEEEEe-----CCC---CeEEEEeecCcCCCCeEEEEEe----CCcEEEEee------
Q psy10778 407 IGYIR--E---IP-CVDPNTPVSHVTMS-----ETN---GEIASVLQTTKTGGSILRLHTI----NAQLITSLA------ 462 (556)
Q Consensus 407 ~~~v~--~---l~-~~h~~~~V~~l~~s-----p~~---~~i~s~s~~~~~~d~~I~iwdi----~g~~i~~~~------ 462 (556)
+..+. . +. + | ...|++++|+ ||| ..|++++ .|++|++||+ +|+....+.
T Consensus 606 ~~~~~~~~~~~~~~g-h-~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs-----~D~tv~~wd~~p~~~g~~~~~~~~~~~~~ 678 (902)
T 2oaj_A 606 PAIIYMENIREISGA-Q-SACVTCIEFVIMEYGDDGYSSILMVCGT-----DMGEVITYKILPASGGKFDVQLMDITNVT 678 (902)
T ss_dssp TEEEEEEEGGGTCSS-C-CCCEEEEEEEEEECTTSSSEEEEEEEEE-----TTSEEEEEEEEECGGGCEEEEEEEEEECC
T ss_pred CeEEEEeehhHhccc-c-ccceEEEEEEEEecCCCCCcceEEEEEe-----cCCcEEEEEEecCCCCcEEEEecCceecC
Confidence 76654 2 32 6 8 8899999999 885 7999999 8999999998 377665552
Q ss_pred cCCCeEEEE-EeeC--------------------CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEE---
Q psy10778 463 SELRITSVT-FSNA--------------------PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAV--- 518 (556)
Q Consensus 463 ~~~~i~~i~-~s~~--------------------pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l--- 518 (556)
+.+.|.+++ |+.. +++ .+|+++ +..|++|++.++++.+... .|...+.++
T Consensus 679 ~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~---~~l~~~--~~~ir~~~~~~~k~~~k~~-~~~~~~~~v~~~ 752 (902)
T 2oaj_A 679 SKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPG---IVLITG--FDDIRLITLGKSKSTHKGF-KYPLAATGLSYI 752 (902)
T ss_dssp SSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCE---EEEEEC--SSEEEEECTTCCCEEEEEC-SSCEEEEEEEEE
T ss_pred CCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCe---EEEEEe--ccceEEEeCccccceeeEc-ccceeeeEEEEE
Confidence 246777776 5410 233 333333 7799999999999988775 566667776
Q ss_pred E------EecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 519 T------YSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 519 ~------~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
. +++++..|++++.||.|++|++++.+++..+.
T Consensus 753 ~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~ 791 (902)
T 2oaj_A 753 STVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEH 791 (902)
T ss_dssp EEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EeccccccccCceEEEEEeCCCcEEEEECcchHHHhhcc
Confidence 5 68889999999999999999999988765543
No 116
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=1.2e-24 Score=224.30 Aligned_cols=240 Identities=10% Similarity=0.067 Sum_probs=177.1
Q ss_pred eEEeccC-------CCeEEEEeCCCCCCcc---------eEcCCCCCceEEEEEcCCCCEEEEEe-----------CCCc
Q psy10778 295 MICWNEC-------DNLIRLKMSKELPATP---------VIRPPLGATIATATTAPDCHTLWLGL-----------TSGN 347 (556)
Q Consensus 295 ~l~~gs~-------Dg~I~lw~~~~~~~~~---------~~~~~h~~~V~~i~~s~dg~~l~tgs-----------~Dg~ 347 (556)
+|++|+. |+.|++|++..+.... .....|.+.|++++++ ++.+++|. .|++
T Consensus 28 ~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~ 105 (365)
T 4h5i_A 28 LLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKH 105 (365)
T ss_dssp EEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCC
T ss_pred EEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCc
Confidence 6666654 3469999987553321 1122677889888765 45677664 5678
Q ss_pred EEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEE--EcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEE
Q psy10778 348 ILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVS--SSEDGTCLLWDINTIGYIREIPCVDPNTPVSHV 425 (556)
Q Consensus 348 I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s--gs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l 425 (556)
+++|++....................+...+.+++|+|||+++++ ++.|++|+|||+.+++.+..+.. ...|.++
T Consensus 106 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~---~~~V~~v 182 (365)
T 4h5i_A 106 LRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET---RGEVKDL 182 (365)
T ss_dssp EEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC---SSCCCEE
T ss_pred EEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC---CCceEEE
Confidence 999998765221111111111223345567999999999998764 45799999999999999998875 6889999
Q ss_pred EEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEe---ecCCCeEEEEEeeCCCCCcceEEEEEeCCC----eEEEEeC
Q psy10778 426 TMSETNGEIASVLQTTKTGGSILRLHTINAQLITSL---ASELRITSVTFSNAPEGVSQNVIVTGHSDG----TIQLWSG 498 (556)
Q Consensus 426 ~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~---~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg----~I~iwd~ 498 (556)
+|+|+|+++++++ .++.+.+|...++.+... .+...+.+++|+ |++ ..+++++.|+ .+++|++
T Consensus 183 ~fspdg~~l~s~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs--pdg---~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 183 HFSTDGKVVAYIT-----GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI--ADD---TVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp EECTTSSEEEEEC-----SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE--ETT---EEEEEEEESSSCCEEEEEEEE
T ss_pred EEccCCceEEecc-----ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc--CCC---CEEEEEecCCcceeEEeeccc
Confidence 9999999999987 454444444457665443 356789999999 889 8999998877 6888998
Q ss_pred CCCeE----EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 499 YKLAH----LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 499 ~~~~~----~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
..... ...+. +|..+|++++|+|||++|++|+.||.|+|||+.+++.+..+
T Consensus 253 ~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 253 KSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp ETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 76553 33455 78899999999999999999999999999999997766554
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=4.8e-23 Score=212.82 Aligned_cols=229 Identities=11% Similarity=0.111 Sum_probs=190.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+++.++.|+.|++||..+++....+. +...+.+++|+|++++|+++ +.++.|++||+.++ +.+..+..
T Consensus 46 l~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---------~~~~~~~~ 114 (391)
T 1l0q_A 46 VYVANAHSNDVSIIDTATNNVIATVP--AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---------TVAGTVKT 114 (391)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---------EEEEEEEC
T ss_pred EEEECCCCCeEEEEECCCCeEEEEEE--CCCCccceEECCCCCEEEEEECCCCEEEEEECCCC---------eEEEEEeC
Confidence 55788899999999999888777665 33489999999999988654 56799999998865 33344444
Q ss_pred CCccEEEEEEccCCCEE-EEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE-EEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCAGFSVA-VSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIA-SVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l-~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~-s~s~~~~~~d~~I~iw 451 (556)
...+.+++|+|+++.+ ++++.|+.|++||+.+++.+..+.. ...+..++|+|+++.++ +++ .++.|++|
T Consensus 115 -~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~dg~~l~~~~~-----~~~~v~~~ 185 (391)
T 1l0q_A 115 -GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV---GRSPKGIAVTPDGTKVYVANF-----DSMSISVI 185 (391)
T ss_dssp -SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---CSSEEEEEECTTSSEEEEEET-----TTTEEEEE
T ss_pred -CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec---CCCcceEEECCCCCEEEEEeC-----CCCEEEEE
Confidence 4578999999999976 7888999999999999999998887 46789999999999885 444 78999999
Q ss_pred EeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEe---CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEE
Q psy10778 452 TIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGH---SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHL 527 (556)
Q Consensus 452 di~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~---~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l 527 (556)
|++ ++.+..+.+...+.+++|+ |++ +.|++++ .++.|++||+.+++.+..+. .+ ..+.+++|+|+++.|
T Consensus 186 d~~~~~~~~~~~~~~~~~~~~~~--~~g---~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 186 DTVTNSVIDTVKVEAAPSGIAVN--PEG---TKAYVTNVDKYFNTVSMIDTGTNKITARIP-VG-PDPAGIAVTPDGKKV 258 (391)
T ss_dssp ETTTTEEEEEEECSSEEEEEEEC--TTS---SEEEEEEECSSCCEEEEEETTTTEEEEEEE-CC-SSEEEEEECTTSSEE
T ss_pred ECCCCeEEEEEecCCCccceEEC--CCC---CEEEEEecCcCCCcEEEEECCCCeEEEEEe-cC-CCccEEEEccCCCEE
Confidence 997 6777777788899999999 888 7787777 68999999999999998887 44 468999999999877
Q ss_pred -EEEcCCCcEEEEEcCCCCCcCee
Q psy10778 528 -YASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 528 -~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
++++.|+.|++||+.+++.+..+
T Consensus 259 ~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 259 YVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCcEEEEE
Confidence 67788999999999987655443
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.2e-24 Score=247.62 Aligned_cols=202 Identities=12% Similarity=0.149 Sum_probs=173.9
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEE
Q psy10778 321 PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCL 400 (556)
Q Consensus 321 ~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~ 400 (556)
.+|.+.|++++|+|++++||+|+.||+|+||+.... +. .....|...|.+++|+| +++|++++.|++|+
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~---------~~-~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~ 82 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV---------EV-VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVY 82 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC---------EE-EEECSSCCCEEEEEEET-TTEEEEEETTCEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc---------EE-EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEE
Confidence 378999999999999999999999999999987543 11 22235788999999999 88999999999999
Q ss_pred EEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEe-------------ecCCCe
Q psy10778 401 LWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSL-------------ASELRI 467 (556)
Q Consensus 401 iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~-------------~~~~~i 467 (556)
+||+.+++.+..+.. ...|++++|+|++.++++++ .++.|++||+++..+..+ .|.+.|
T Consensus 83 lWd~~~~~~~~~~~~---~~~V~~v~~sp~g~~l~sgs-----~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V 154 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFV---PGKITSIDTDASLDWMLIGL-----QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPI 154 (902)
T ss_dssp EEETTTCSEEEEEEC---SSCEEEEECCTTCSEEEEEE-----TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCC
T ss_pred EEECCCCcEEEEEcC---CCCEEEEEECCCCCEEEEEc-----CCCcEEEEECCCCccccceeccccccccccccCCCCe
Confidence 999999999988865 68899999999999999999 899999999984433211 256799
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC------------------CCCeEEEEEecCCCEEEE
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV------------------ALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h------------------~~~V~~l~~s~dg~~l~s 529 (556)
.+++|+ |++. ..+++|+.||.| +||+.+++.+..+. .| ...|++++|+|+|++|++
T Consensus 155 ~sl~~s--p~~~--~~l~~g~~dg~v-lWd~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 155 VSIQWN--PRDI--GTVLISYEYVTL-TYSLVENEIKQSFI-YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp CEEEEE--TTEE--EEEEEECSSCEE-EEETTTTEEEEEEC-CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred EEEEEc--cCCC--CEEEEEeCCCcE-EEECCCCceEEEEe-cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 999999 7531 689999999999 99999999988886 33 477999999999999999
Q ss_pred EcCCCcEEEEEcCCCCCc
Q psy10778 530 SNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~ 547 (556)
|+.||.|++||+++++.+
T Consensus 229 gs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 229 IHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EETTCCEEEEETTTCCEE
T ss_pred EECCCeEEEEECCCCcEE
Confidence 999999999999886543
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.6e-24 Score=219.35 Aligned_cols=222 Identities=10% Similarity=0.030 Sum_probs=173.4
Q ss_pred EEeccCCCeEEEEeCC---------CCCCcceEcCCCCCceEEEEEcC--CCCEEEEEeCCCcEEEEEeeeccCcccccc
Q psy10778 296 ICWNECDNLIRLKMSK---------ELPATPVIRPPLGATIATATTAP--DCHTLWLGLTSGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 296 l~~gs~Dg~I~lw~~~---------~~~~~~~~~~~h~~~V~~i~~s~--dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~ 364 (556)
+++|+.|++|++|+.. +++........|.+.|.+++|+| +++++++|+.||+|++||+..+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~-------- 159 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD-------- 159 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSS--------
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC--------
Confidence 8889999999999665 44445555557888999999999 9999999999999999999865
Q ss_pred cCCCeEe-eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEE-EEeCCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 365 CKPPTIL-LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYI-REIPCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 365 ~~~~~~l-~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v-~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
+..... ..|...|++++|+|++.++++|+.||.|++||+++++.+ ..+...| ..+|++++|+|++.+|++++
T Consensus 160 -~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~l~fs~~g~~l~s~~---- 233 (343)
T 3lrv_A 160 -SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDE-EAKIKEVKFADNGYWMVVEC---- 233 (343)
T ss_dssp -CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCT-TSCEEEEEECTTSSEEEEEE----
T ss_pred -cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccC-CCCEEEEEEeCCCCEEEEEe----
Confidence 233333 345668999999999999999999999999999998877 6665437 89999999999999999998
Q ss_pred CCCCeEEEEEeC-CcEEEEee----cCCCe--EEEEEeeCCCCCcceEEEEEeC-CCeEEEEeCCCCeEEEEecCCCCCC
Q psy10778 443 TGGSILRLHTIN-AQLITSLA----SELRI--TSVTFSNAPEGVSQNVIVTGHS-DGTIQLWSGYKLAHLLTLNTNVALP 514 (556)
Q Consensus 443 ~~d~~I~iwdi~-g~~i~~~~----~~~~i--~~i~~s~~pdg~~~~~l~tg~~-dg~I~iwd~~~~~~~~~~~~~h~~~ 514 (556)
.+ .|++||++ ++.+..+. +...+ .+++|+ |+| ++|++++. |+.|++|++......... .+
T Consensus 234 -~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g---~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~ 301 (343)
T 3lrv_A 234 -DQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID--DSG---KNMIAYSNESNSLTIYKFDKKTKNWTK-----DE 301 (343)
T ss_dssp -SS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEEC--TTS---SEEEEEETTTTEEEEEEECTTTCSEEE-----EE
T ss_pred -CC-eEEEEEcCCCCcceeecccccccccccceEEEEC--CCC---CEEEEecCCCCcEEEEEEcccccceEe-----cC
Confidence 45 99999997 44333322 11222 479999 899 89999988 999999998655432222 45
Q ss_pred eEEEEEec---CCCEEEEEcCCCcEEEEEcCC
Q psy10778 515 VIAVTYSC---DSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 515 V~~l~~s~---dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+..++|++ +.+.+++++.||.+.++-...
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 302 ESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred ceeEecCccccccceeEEEecCCceEEEEecC
Confidence 77888888 888999999999998886543
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=6.8e-23 Score=210.22 Aligned_cols=222 Identities=9% Similarity=0.113 Sum_probs=173.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+++.|+.|++|++||..+++.+..+. |...|.+++++++ .++++. |+.|++||+.... +.+..+..
T Consensus 73 ~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~--~~~~~~-~~~i~i~d~~~~~--------~~~~~~~~- 138 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSRE--FIVVSY-GDVISVFKFGNPW--------KRITDDIR- 138 (355)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSS--EEEEEE-TTEEEEEESSTTC--------CBSSCCEE-
T ss_pred EEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCC--EEEEEE-cCEEEEEECCCCc--------eeeEEecc-
Confidence 55678889999999999887776664 6779999999876 344444 7899999987541 11222222
Q ss_pred CccEEEEEEccCCCEEEE--EcCCCcEEEEeCCCCe----------------EEEEeCCCCCCCCeeEEEEeCCCCeEEE
Q psy10778 375 SACVTDLYLCAGFSVAVS--SSEDGTCLLWDINTIG----------------YIREIPCVDPNTPVSHVTMSETNGEIAS 436 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~s--gs~Dg~I~iwdl~~~~----------------~v~~l~~~h~~~~V~~l~~sp~~~~i~s 436 (556)
+...+++++ ..++. |+.||.|++||+.+++ .+..+.+ | ...|.+++|+|++.+|++
T Consensus 139 --~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h-~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 139 --FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-H-TNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp --EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECC-C-SSCEEEEEECTTSSEEEE
T ss_pred --CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-c-CCceEEEEECCCCCEEEE
Confidence 444556666 55555 6899999999999865 2678888 9 999999999999999999
Q ss_pred EeecCcCCCCe-EEEEEeC-CcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE--EEE---
Q psy10778 437 VLQTTKTGGSI-LRLHTIN-AQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH--LLT--- 506 (556)
Q Consensus 437 ~s~~~~~~d~~-I~iwdi~-g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~--~~~--- 506 (556)
++ .|++ |++||++ ++.+..+. |...|.+++|+ |+| ++|++|+.|++|++||+..... ...
T Consensus 213 ~s-----~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s--~~~---~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~ 282 (355)
T 3vu4_A 213 CS-----QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS--TDG---SKLAVVSDKWTLHVFEIFNDQDNKRHALKG 282 (355)
T ss_dssp EE-----TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC--TTS---CEEEEEETTCEEEEEESSCCSCCCSEETTT
T ss_pred Ee-----CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC--CCC---CEEEEEECCCEEEEEEccCCCCcccccccc
Confidence 99 8998 9999997 88888886 78899999999 899 8999999999999999965431 111
Q ss_pred -----------------ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 507 -----------------LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 507 -----------------~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
+..........++|+++++.|++++.||.+++|++..++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 283 WINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp TEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred eeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 1111223346799999999999999999999999877443
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.4e-23 Score=215.35 Aligned_cols=201 Identities=12% Similarity=0.148 Sum_probs=160.6
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEE-EEEcCCCcEE
Q psy10778 322 PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVA-VSSSEDGTCL 400 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~sgs~Dg~I~ 400 (556)
.|.+.|++++|+|||++|++|+.+| +++|+.... +. ....+...+..+++.++++.+ ++|+.|++|+
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 84 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPV---------AH--IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVH 84 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTE---------EE--EEEEECSCCCEEEECTTSSEEEEECSSTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCc---------ce--eeeeecCCeEEEEEcCCCCEEEEEECCccEEE
Confidence 6899999999999999999998775 789997654 11 122222357788888888876 5678889999
Q ss_pred EEeCCCCeEEEEeCCCCCCCCeeEEEEeCCC-----------------------------------CeEEEEeecCcCCC
Q psy10778 401 LWDINTIGYIREIPCVDPNTPVSHVTMSETN-----------------------------------GEIASVLQTTKTGG 445 (556)
Q Consensus 401 iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~-----------------------------------~~i~s~s~~~~~~d 445 (556)
+||+.+++.+..+.. ...|.+++++++. ..+++++ +..+
T Consensus 85 iWd~~~~~~~~~~~~---~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~s---g~~~ 158 (355)
T 3vu4_A 85 IWDDVKKQDVSRIKV---DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSN---EFNL 158 (355)
T ss_dssp EEETTTTEEEEEEEC---SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEE---SSCT
T ss_pred EEECCCCcEEEEEEC---CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeC---CCcC
Confidence 999999999998876 5789999888752 1233320 1178
Q ss_pred CeEEEEEeCC-c---------------E-EEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCe-EEEEeCCCCeEEEE
Q psy10778 446 SILRLHTINA-Q---------------L-ITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGT-IQLWSGYKLAHLLT 506 (556)
Q Consensus 446 ~~I~iwdi~g-~---------------~-i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~-I~iwd~~~~~~~~~ 506 (556)
|.|++||++. + + +..+ .|...|.+++|+ |+| ++|++|+.||+ |++||+.+++.+..
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s--~~g---~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN--RKS---DMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEEC--TTS---SEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC--CCC---CEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 8999999873 2 1 3344 578899999999 899 89999999998 99999999999999
Q ss_pred ecCC-CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 507 LNTN-VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 507 ~~~~-h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
+..+ |...|++++|+|++++|++++.||.|++||+.+..
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9744 89999999999999999999999999999997743
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=1.6e-22 Score=211.81 Aligned_cols=224 Identities=12% Similarity=0.049 Sum_probs=188.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEE-EeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWL-GLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~t-gs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++++.|+.|++|+.++++....+. .|...+.+++|+|+++.+++ ++.|+.|++||+..+ +.+..+..
T Consensus 183 ~~~s~~~d~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---------~~~~~~~~ 252 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---------LEIRKTDK 252 (433)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---------EEEEECCC
T ss_pred EEEEECCCCEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---------cEEEEecC
Confidence 78889999999999999887777665 78889999999999998854 458999999998765 23344444
Q ss_pred CCccEEEEEEccCCCEEEEEc--------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCC
Q psy10778 374 HSACVTDLYLCAGFSVAVSSS--------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGG 445 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs--------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d 445 (556)
...+.+++|+|+++.+++++ .||.|++||+.+++.+..+.. ...+.+++|+|+++.+++++. .+
T Consensus 253 -~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~----~~ 324 (433)
T 3bws_A 253 -IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---PGNKRHIVSGNTENKIYVSDM----CC 324 (433)
T ss_dssp -CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE---EECEEEEEECSSTTEEEEEET----TT
T ss_pred -CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC---CCCcceEEECCCCCEEEEEec----CC
Confidence 34599999999999998887 589999999999988877754 568999999999987655532 89
Q ss_pred CeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeC---------------CCeEEEEeCCCCeEEEEecC
Q psy10778 446 SILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHS---------------DGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 446 ~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~---------------dg~I~iwd~~~~~~~~~~~~ 509 (556)
+.|++||++ ++.+..+.+...+.+++|+ |+| +++++++. ||.|++||+.+++.+..+.
T Consensus 325 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~- 398 (433)
T 3bws_A 325 SKIEVYDLKEKKVQKSIPVFDKPNTIALS--PDG---KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE- 398 (433)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEEEEEEC--TTS---SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE-
T ss_pred CEEEEEECCCCcEEEEecCCCCCCeEEEc--CCC---CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec-
Confidence 999999997 7788888888899999999 888 78887776 5799999999999999887
Q ss_pred CCCCCeEEEEEecCCCEEEEEcC-CCcEEEEEcCC
Q psy10778 510 NVALPVIAVTYSCDSQHLYASNT-EGLVIIWESSS 543 (556)
Q Consensus 510 ~h~~~V~~l~~s~dg~~l~sgs~-Dg~V~vwdl~~ 543 (556)
. ...+.+++|+|+|++|++++. ||.|++|++.+
T Consensus 399 ~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 399 A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 3 568999999999999988765 99999999864
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=9.2e-24 Score=219.80 Aligned_cols=208 Identities=12% Similarity=0.080 Sum_probs=145.5
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEcc--------CCCEEEEEcCCCcE
Q psy10778 328 ATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCA--------GFSVAVSSSEDGTC 399 (556)
Q Consensus 328 ~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~--------~~~~l~sgs~Dg~I 399 (556)
....+.+++.+|++|+.|++|++||...+.. .....+..+.+|.+.|++++|+| ++++|+||+.|++|
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~----~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETI----ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEE----EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCcc----ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 3334445567899999999999999986521 11122345789999999999998 78899999999999
Q ss_pred EEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC-eEEEEeecCcCCCCeEEEEEeC-CcEEEEe----------------
Q psy10778 400 LLWDINTIGYIREIPCVDPNTPVSHVTMSETNG-EIASVLQTTKTGGSILRLHTIN-AQLITSL---------------- 461 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~-~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~---------------- 461 (556)
+|||+.++..+..+.. | ..++.+++|+|++. .|++++ .|++|++||++ ++.....
T Consensus 169 ~~Wd~~~~~~~~~~~~-~-~~~v~~v~~~p~~~~~l~~~~-----~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~ 241 (393)
T 4gq1_A 169 IIWRLTDEGPILAGYP-L-SSPGISVQFRPSNPNQLIVGE-----RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT 241 (393)
T ss_dssp EEEEEETTEEEEEEEE-C-SSCEEEEEEETTEEEEEEEEE-----TTSEEEEEETTCCC----------CSCCCSEEEES
T ss_pred EEEECCCCceeeeecC-C-CCCcEEEEECCCCCceEEecC-----CCCEEEEEECCCCcccccccccCCcccceEEeccc
Confidence 9999998888777777 7 89999999999875 688888 89999999986 3322111
Q ss_pred ----------ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe----------
Q psy10778 462 ----------ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS---------- 521 (556)
Q Consensus 462 ----------~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s---------- 521 (556)
.+...+.++.|+. +++ +.|++++.|+.+++||+..++....+. .|...+..+.+.
T Consensus 242 ~~~~~~~~~~~~~~~v~~v~~~~-~dg---~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 242 LPLVNTCHSSGIASSLANVRWIG-SDG---SGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp GGGC------CCSSSCSEEEEET-TTT---CEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSC
T ss_pred ccceeeeecccccccceeeeeec-CCC---CEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccC
Confidence 2345778888874 678 899999999999999998877666665 444444433333
Q ss_pred --------c--CCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 522 --------C--DSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 522 --------~--dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+ ++.++++|+.||.|++||+.++.....+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~ 356 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI 356 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec
Confidence 2 34467788999999999999877655443
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.4e-22 Score=215.07 Aligned_cols=209 Identities=10% Similarity=-0.014 Sum_probs=167.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++|+++.|++|+ +.+.++ .+. +|...|.+++|+|+| .++++.+|+.+.. ....+ .|
T Consensus 29 ~iASas~D~TV~--d~~~~~---~l~-gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~----------~~~~~-~~ 84 (588)
T 2j04_A 29 LYLTTFPDISIG--QPKYAK---DIN-CNSKNLFHVKEFPLE-------FENKLDFELAQQN----------GLLNS-QP 84 (588)
T ss_dssp EEEECSSSEEEE--EECCCS---CCS-SBGGGTEEEEEECCC-------CCCTTTTSCCCSS----------CSSTT-SC
T ss_pred EEEEEcCCceee--cccccc---eec-CCCccEEEEEECCCC-------CcceEEEEeCCCc----------eEeec-CC
Confidence 899999999999 654443 333 899999999999998 5677766665432 11111 55
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC----CCeeEEEEeCCCCeEEEEeecCcCCCCeEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPN----TPVSHVTMSETNGEIASVLQTTKTGGSILRL 450 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~----~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~i 450 (556)
...|.+++|||+|.+||+++.||.|++||... .+..+.. + . ..+.+++|||+|+.|++++ .||+|++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~-~-~~~~~~sv~svafSPDG~~LAsgs-----~DGtVkI 155 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDS-K-GNLSSRTYHCFEWNPIESSIVVGN-----EDGELQF 155 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCC-S-SCSTTTCEEEEEECSSSSCEEEEE-----TTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccC-C-CccccccEEEEEEcCCCCEEEEEc-----CCCEEEE
Confidence 88999999999999999999999999999553 5555553 2 2 2599999999999999999 9999999
Q ss_pred EEeCCc--------EEEEee-----cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE---EEEecCCCCCC
Q psy10778 451 HTINAQ--------LITSLA-----SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH---LLTLNTNVALP 514 (556)
Q Consensus 451 wdi~g~--------~i~~~~-----~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~---~~~~~~~h~~~ 514 (556)
||+.+. .+.++. |...|.+++|+ |+ . +++++.|+.|++||+..++. ..++..+|...
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS--Pd----g-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~ 228 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY--ED----V-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRK 228 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE--TT----E-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEc--CC----c-EEEEeCCCeEEEEECCCCccccceeeecccccCc
Confidence 999843 345542 45699999999 77 4 88999999999999987773 45664367889
Q ss_pred eEEEEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 515 VIAVTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 515 V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
|.+++|+ |+.|++++ +|.|++||+.+++.
T Consensus 229 V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred EEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 9999999 68899887 69999999988655
No 125
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=4.8e-21 Score=200.77 Aligned_cols=246 Identities=13% Similarity=0.175 Sum_probs=184.1
Q ss_pred CCCCcceeEeeccCCeEeeecceeeeeeeccCcccc--cc-----cccccccCCcceEEeccCCCeEEEEeCCCCCCcce
Q psy10778 246 HRNPVSKLVPLRTNDVFGLAKFTTLLHSYHKDKNTN--LI-----SSLNVIGAGAGMICWNECDNLIRLKMSKELPATPV 318 (556)
Q Consensus 246 ~~~~i~~l~~l~~~~v~~~~~~~~~~~~~~~~k~~~--~~-----~~~~~~~~~~~~l~~gs~Dg~I~lw~~~~~~~~~~ 318 (556)
+...|..+...++|..++.......+..+..+.+.. .+ ....+.++ ..++++|+.|+.+++|+.........
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVA 224 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeE
Confidence 445566676667777665544333333332221110 00 01111121 23899999999999999886544433
Q ss_pred EcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCC-EEEE--EcC
Q psy10778 319 IRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFS-VAVS--SSE 395 (556)
Q Consensus 319 ~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s--gs~ 395 (556)
...+|...+.++.++++++++++++.||.+++|+...+... ...+.....|...|.+++|+|.+. ++++ |+.
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~-----~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC-----SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred EecccccceeeeeecCCCCeeeeeeccccceEEeecccccc-----ceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 33489999999999999999999999999999998765211 134577889999999999999765 5554 568
Q ss_pred CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCeEEEEEe
Q psy10778 396 DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-SELRITSVTFS 473 (556)
Q Consensus 396 Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i~~i~~s 473 (556)
|++|++||+.+++.+..+.. ...+.++.|+++++.+++++.. .++.|++||+. ++++..+. |.+.|++++|+
T Consensus 300 D~~I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~~lv~~sg~---~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 373 (420)
T ss_dssp TCEEEEEETTTTEEEEEEEC---SSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CCEEEEEeCCccccceeecc---ccceeeeeecCCCCeEEEEEec---CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 99999999999999999987 5789999999999999887521 58999999997 88888885 78899999999
Q ss_pred eCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 474 NAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 474 ~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
|+| .+|++|+.||+|++||+....+.+...
T Consensus 374 --pdg---~~l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 374 --PDG---ATVASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp --TTS---SCEEEEETTTEEEEECCSCSSCC----
T ss_pred --CCC---CEEEEEecCCeEEEEECCCCCccchhh
Confidence 999 899999999999999998776655554
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.9e-20 Score=196.25 Aligned_cols=216 Identities=10% Similarity=0.030 Sum_probs=172.1
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCC---cEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSG---NILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg---~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
+.|++||..++.. ..+. .|...|.+++|+|+|+.|++++.++ .|++||+.++ + ...+..|...+.
T Consensus 159 ~~i~i~d~~g~~~-~~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg---------~-~~~l~~~~~~~~ 226 (415)
T 2hqs_A 159 YELRVSDYDGYNQ-FVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---------A-VRQVASFPRHNG 226 (415)
T ss_dssp EEEEEEETTSCSC-EEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---------C-EEEEECCSSCEE
T ss_pred ceEEEEcCCCCCC-EEEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC---------c-EEEeecCCCccc
Confidence 7999999986543 3333 6888999999999999999999875 9999999865 2 245778888999
Q ss_pred EEEEccCCCEEE-EEcCCCc--EEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC--eEEEEEeC
Q psy10778 380 DLYLCAGFSVAV-SSSEDGT--CLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS--ILRLHTIN 454 (556)
Q Consensus 380 ~l~~s~~~~~l~-sgs~Dg~--I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~--~I~iwdi~ 454 (556)
+++|+|+|+.|+ +++.||. |.+||+.+++. ..+.. | ...+.+++|+|+|+.|++++. .++ .|++||++
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~-~-~~~~~~~~~spdg~~l~~~s~----~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD-G-RSNNTEPTWFPDSQNLAFTSD----QAGRPQVYKVNIN 299 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC-C-SSCEEEEEECTTSSEEEEEEC----TTSSCEEEEEETT
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC-C-CCcccceEECCCCCEEEEEEC----CCCCcEEEEEECC
Confidence 999999999777 7776665 99999998765 56666 7 788999999999999998873 234 68888887
Q ss_pred CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCC---CeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10778 455 AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSD---GTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 455 g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~d---g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sg 530 (556)
+.....+ .+...+.+++|+ |+| ++|++++.+ +.|++||+.+++.. .+. .+ ..+.+++|+|||+.|+++
T Consensus 300 ~~~~~~l~~~~~~~~~~~~s--pdG---~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~-~~-~~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 300 GGAPQRITWEGSQNQDADVS--SDG---KFMVMVSSNGGQQHIAKQDLATGGVQ-VLS-ST-FLDETPSLAPNGTMVIYS 371 (415)
T ss_dssp SSCCEECCCSSSEEEEEEEC--TTS---SEEEEEEECSSCEEEEEEETTTCCEE-ECC-CS-SSCEEEEECTTSSEEEEE
T ss_pred CCCEEEEecCCCcccCeEEC--CCC---CEEEEEECcCCceEEEEEECCCCCEE-Eec-CC-CCcCCeEEcCCCCEEEEE
Confidence 4333333 456788899999 999 788877754 58999999888763 454 34 389999999999999988
Q ss_pred cCCC---cEEEEEcCCCC
Q psy10778 531 NTEG---LVIIWESSSHN 545 (556)
Q Consensus 531 s~Dg---~V~vwdl~~~~ 545 (556)
+.++ .|++||+..+.
T Consensus 372 s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEETTEEEEEEEETTSCC
T ss_pred EcCCCccEEEEEECCCCc
Confidence 8777 79999997543
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=1e-20 Score=189.30 Aligned_cols=180 Identities=12% Similarity=0.033 Sum_probs=141.6
Q ss_pred eEEec--cCCCeEEEEeCC-CCCCcceEcCCCCCceEEEEEcC---CCCEEEEEeCCCcEEEEEeeeccCcccccccCCC
Q psy10778 295 MICWN--ECDNLIRLKMSK-ELPATPVIRPPLGATIATATTAP---DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~g--s~Dg~I~lw~~~-~~~~~~~~~~~h~~~V~~i~~s~---dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~ 368 (556)
++.++ +.|+.|++|++. +++.+.... .|...++.++|++ ++.+|++|+.|++|+|||+.++ +.+
T Consensus 147 lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG---------k~l 216 (356)
T 2w18_A 147 LVSSSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG---------QLL 216 (356)
T ss_dssp EEEEESSSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC---------CEE
T ss_pred EEEecccCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC---------cEE
Confidence 55553 369999999994 466555554 7888999999999 7899999999999999999987 566
Q ss_pred eEeeCCC---ccEEEEEEccCCCEE------------EEEcCCCcEEEEeCCCCeEEEEe-----CCCCCCCCeeEEEEe
Q psy10778 369 TILLGHS---ACVTDLYLCAGFSVA------------VSSSEDGTCLLWDINTIGYIREI-----PCVDPNTPVSHVTMS 428 (556)
Q Consensus 369 ~~l~~h~---~~V~~l~~s~~~~~l------------~sgs~Dg~I~iwdl~~~~~v~~l-----~~~h~~~~V~~l~~s 428 (556)
+++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++.+..+ .+ | ...+.+..+
T Consensus 217 ~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~G-h-~~~~lsg~~- 293 (356)
T 2w18_A 217 KKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPG-Q-AGRFLEGDV- 293 (356)
T ss_dssp EEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTT-C-CCCEEEEEE-
T ss_pred EEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCC-C-cceeEcccc-
Confidence 7887654 467888999999876 66889999999999999887765 24 5 444444444
Q ss_pred CCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee-cCCCe-EEEEEeeCCCCCcceEEEEEeCCCeEEEEeC
Q psy10778 429 ETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-SELRI-TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSG 498 (556)
Q Consensus 429 p~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-~~~~i-~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~ 498 (556)
++..+++++ .|++|++||+. |+++.++. |...+ .+++|+ |+| ++|++|+.|++|+|||+
T Consensus 294 -sg~~lASgS-----~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS--PDG---~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 -KDHCAAAIL-----TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS--GTD---SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -ETTEEEEEE-----TTSCEEEEETTTCSEEEEECCC--CCCCEEEEC--SSS---SEEEEECTTSCEEEEEE
T ss_pred -CCCEEEEEc-----CCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC--CCC---CEEEEEECCCcEEEecC
Confidence 377889988 89999999998 89999986 44444 468999 999 89999999999999985
No 128
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=2.4e-19 Score=178.82 Aligned_cols=192 Identities=16% Similarity=0.221 Sum_probs=160.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++++|+.++.+++|+............+|...+.++++.+++++|++|+.||+|++||+.++... .........|
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~ 195 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQH 195 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB-----SCCSEEECCC
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc-----ccceeeeccc
Confidence 78888899999999887665444444489999999999999999999999999999999865221 1345667789
Q ss_pred CccEEEEEEccCCC---EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 375 SACVTDLYLCAGFS---VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 375 ~~~V~~l~~s~~~~---~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.+.|.++++++++. .+++++.+++|++||............ ...+..+.+++++..+++++.. .|+.|++|
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~sg~---~d~~i~iw 269 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA---HSQVCSILWSPHYKELISGHGF---AQNQLVIW 269 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEEETTTTEEEEEECT---TTCCEEEE
T ss_pred CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc---eeeeeeeeecccccceEEEEEc---CCCEEEEE
Confidence 99999999999775 335678899999999999887777765 6889999999999998876521 68999999
Q ss_pred EeC-CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe
Q psy10778 452 TIN-AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA 502 (556)
Q Consensus 452 di~-g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~ 502 (556)
|++ ++++..+. |.+.|++++|+ |+| ++|++|+.||+|++||+.+..
T Consensus 270 d~~~~~~~~~l~gH~~~V~~l~~s--pdg---~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 270 KYPTMAKVAELKGHTSRVLSLTMS--PDG---ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEEC--TTS---SCEEEEETTTEEEEECCSCCC
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEc--CCC---CEEEEEecCCeEEEEECCCCC
Confidence 997 88888885 78999999999 899 899999999999999987653
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=5.7e-20 Score=180.47 Aligned_cols=223 Identities=14% Similarity=0.104 Sum_probs=171.4
Q ss_pred eccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeee-ccCcccccccCCCeEeeCC-C
Q psy10778 298 WNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYEL-NASTNKIEFCKPPTILLGH-S 375 (556)
Q Consensus 298 ~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~-~~~~~~~~~~~~~~~l~~h-~ 375 (556)
.++.|+.|++|+..+++..... .|...|.+++|+|+|++|++++ ++.|++||+.. + +......+| .
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~---------~~~~~~~~~~~ 84 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW--QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP---------SPEKVDTGFAT 84 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE--EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC---------SCEECCCTTCC
T ss_pred CCCcceeEEEEeCCCCceeeec--cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC---------CceEecccccc
Confidence 3568999999999987765444 4788999999999999999987 78999999986 5 233444455 4
Q ss_pred ccEEEEEEccCCCEEEEEc--CCCcEEEE--eCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE-EEeecCcCCCCeEEE
Q psy10778 376 ACVTDLYLCAGFSVAVSSS--EDGTCLLW--DINTIGYIREIPCVDPNTPVSHVTMSETNGEIA-SVLQTTKTGGSILRL 450 (556)
Q Consensus 376 ~~V~~l~~s~~~~~l~sgs--~Dg~I~iw--dl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~-s~s~~~~~~d~~I~i 450 (556)
..+.+++|+|+++.+++++ .++...|| ++.+++ ...+.. ...+..++|+|+++.|+ ++. .++.+++
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~spdg~~l~~~~~-----~~~~~~l 155 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK---NLPSYWHGWSPDGKSFTYCGI-----RDQVFDI 155 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS---SSSEEEEEECTTSSEEEEEEE-----ETTEEEE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec---CCCccceEECCCCCEEEEEEC-----CCCceEE
Confidence 6789999999999999988 33455555 555444 455655 34589999999999888 455 6788999
Q ss_pred EEeC---CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeCC-CCeEEEEecCCCCCCeEEEEEecCCC
Q psy10778 451 HTIN---AQLITSLASELRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSGY-KLAHLLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 451 wdi~---g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
|+++ ++......+...+.+++|+ |+| +.|++++ .++.+++|++. .+..+..+. .+...+.+++|+|+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~ 229 (297)
T 2ojh_A 156 YSMDIDSGVETRLTHGEGRNDGPDYS--PDG---RWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGD 229 (297)
T ss_dssp EEEETTTCCEEECCCSSSCEEEEEEC--TTS---SEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSS
T ss_pred EEEECCCCcceEcccCCCccccceEC--CCC---CEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCC
Confidence 9864 3444334567789999999 888 6666655 58999999875 556667776 5778899999999999
Q ss_pred EEEEEcCC-----------CcEEEEEcCCCCCc
Q psy10778 526 HLYASNTE-----------GLVIIWESSSHNRT 547 (556)
Q Consensus 526 ~l~sgs~D-----------g~V~vwdl~~~~~~ 547 (556)
+|++++.+ +.|++||+.+++..
T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 230 KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred EEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 99988766 56999999886653
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=3.4e-19 Score=179.47 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=179.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC-CCcEEEEEeeeccCcccccccCC-CeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLT-SGNILVYEYELNASTNKIEFCKP-PTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~-~~~l~ 372 (556)
++++++.++.|++||..+++....+. .+...+ +++|+|+|+++++++. ++.|.+||..++ +. ...+.
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~---------~~~~~~~~ 80 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE---------PPKVVAIQ 80 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS---------SCEEEEEE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC---------ceeEEecc
Confidence 67778899999999999988877776 445566 9999999997776665 889999998876 33 45666
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCC---cEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCe-E
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDG---TCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSI-L 448 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg---~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~-I 448 (556)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. ......++|+|+++.+++++. .++. |
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~----~~~~~i 153 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLILIDR----SSANTV 153 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEEEEE----TTTTEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEEEec----CCCceE
Confidence 6766666699999999988655553 899999999999888876 466799999999987776653 5567 9
Q ss_pred EEEEeC--CcEE----EEeecCCCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCCCCeE---EEEecCCCCCCeEEE
Q psy10778 449 RLHTIN--AQLI----TSLASELRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGYKLAH---LLTLNTNVALPVIAV 518 (556)
Q Consensus 449 ~iwdi~--g~~i----~~~~~~~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~~~~~---~~~~~~~h~~~V~~l 518 (556)
.+|+++ +... ..+.......+++|+ |+| +.+ +++..++.|++||+.+++. +..+. ....+.++
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s--pdg---~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~ 226 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFT--PDG---NFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTI 226 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEEC--TTS---SEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCE
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEEC--CCC---CEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceE
Confidence 999986 3332 223345678999999 898 644 5555789999999998887 77776 34677899
Q ss_pred EEecCCCEEEEEc-CCCcEEEEEcCCCCC
Q psy10778 519 TYSCDSQHLYASN-TEGLVIIWESSSHNR 546 (556)
Q Consensus 519 ~~s~dg~~l~sgs-~Dg~V~vwdl~~~~~ 546 (556)
+|+|||+++++++ .++.|.+||+.+++.
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9999999777665 578899999988655
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=3.1e-19 Score=179.40 Aligned_cols=229 Identities=9% Similarity=0.060 Sum_probs=176.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCC-ceEEEEEcCCCCEEE-EEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGA-TIATATTAPDCHTLW-LGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~-~V~~i~~s~dg~~l~-tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
++++++.++.|++||..+++....+..++.. .+.+++|+|+|+.++ +++.++.|.+||+.++ +.+..+.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---------~~~~~~~ 73 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG---------ETLGRID 73 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC---------CEEEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC---------CeEeeEE
Confidence 7888899999999999988777766644432 478999999998765 5566789999998765 2223333
Q ss_pred C-C----CccEEEEEEccCCCEEEEEc------------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE
Q psy10778 373 G-H----SACVTDLYLCAGFSVAVSSS------------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIA 435 (556)
Q Consensus 373 ~-h----~~~V~~l~~s~~~~~l~sgs------------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~ 435 (556)
. + ...+.+++|+|+++.+++++ .++.|.+||+.+++.+..+.. ...+..++|+|+++.++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKLY 150 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC---CCCcceeEECCCCCEEE
Confidence 2 1 22567899999999888876 579999999999988888876 56788999999999888
Q ss_pred EEeecCcCCCCeEEEEEeC-CcEEEEee----------------------------------------------------
Q psy10778 436 SVLQTTKTGGSILRLHTIN-AQLITSLA---------------------------------------------------- 462 (556)
Q Consensus 436 s~s~~~~~~d~~I~iwdi~-g~~i~~~~---------------------------------------------------- 462 (556)
+++ +.|++||+. ++.+..+.
T Consensus 151 ~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 223 (337)
T 1pby_B 151 GLG-------RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLT 223 (337)
T ss_dssp EES-------SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEE
T ss_pred EeC-------CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEE
Confidence 763 457777765 44333221
Q ss_pred ---------------cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEE
Q psy10778 463 ---------------SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHL 527 (556)
Q Consensus 463 ---------------~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l 527 (556)
+...+.+++|+ |+| ++++++ ++.|++||+.+++.+..+.. ...+.+++|+|+|++|
T Consensus 224 ~d~~~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l 294 (337)
T 1pby_B 224 MDLETGEMAMREVRIMDVFYFSTAVN--PAK---TRAFGA--YNVLESFDLEKNASIKRVPL--PHSYYSVNVSTDGSTV 294 (337)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEEC--TTS---SEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSCEE
T ss_pred EeCCCCCceEeecCCCCCceeeEEEC--CCC---CEEEEe--CCeEEEEECCCCcCcceecC--CCceeeEEECCCCCEE
Confidence 11234568999 888 788877 69999999999998888872 3567899999999999
Q ss_pred EEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 528 YASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
++++.++.|.+||+.+++.+..+.
T Consensus 295 ~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 295 WLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp EEESBSSEEEEEETTTCCEEEEEE
T ss_pred EEEcCCCcEEEEECcCCcEEEEEE
Confidence 999999999999999887665543
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=1.1e-19 Score=190.43 Aligned_cols=229 Identities=9% Similarity=-0.016 Sum_probs=174.6
Q ss_pred eEEecc----CCC----eEEEEeC--CCCCCcc--eEcCCCCCceEEEEEcC--------------CCCEEEEEeCC---
Q psy10778 295 MICWNE----CDN----LIRLKMS--KELPATP--VIRPPLGATIATATTAP--------------DCHTLWLGLTS--- 345 (556)
Q Consensus 295 ~l~~gs----~Dg----~I~lw~~--~~~~~~~--~~~~~h~~~V~~i~~s~--------------dg~~l~tgs~D--- 345 (556)
+++.|+ .|| .++|||+ .+++.+. .+. +|...+..+++.+ .+..++.++.+
T Consensus 77 ~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~ 155 (415)
T 2hqs_A 77 AVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGG 155 (415)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSS
T ss_pred EEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCC
Confidence 666665 567 9999999 8777542 233 6777777776654 15667666654
Q ss_pred ---CcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC---cEEEEeCCCCeEEEEeCCCCCC
Q psy10778 346 ---GNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG---TCLLWDINTIGYIREIPCVDPN 419 (556)
Q Consensus 346 ---g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg---~I~iwdl~~~~~v~~l~~~h~~ 419 (556)
++|++||+.. .....+.+|...|.+++|+|+|+.|++++.++ .|++||+.+++... +.. + .
T Consensus 156 ~~~~~i~i~d~~g----------~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~-~-~ 222 (415)
T 2hqs_A 156 QFPYELRVSDYDG----------YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-F-P 222 (415)
T ss_dssp SCCEEEEEEETTS----------CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC-C-S
T ss_pred CccceEEEEcCCC----------CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec-C-C
Confidence 7999999864 23577888999999999999999999999875 99999999987754 555 5 7
Q ss_pred CCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeC-CC--eEEE
Q psy10778 420 TPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHS-DG--TIQL 495 (556)
Q Consensus 420 ~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~-dg--~I~i 495 (556)
..+.+++|+|+|+.|+..+... .+..|++||++ ++......+...+.+++|+ |+| +.|++++. +| .|++
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s--pdg---~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLASGQIRQVTDGRSNNTEPTWF--PDS---QNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEECCCCSSCEEEEEEC--TTS---SEEEEEECTTSSCEEEE
T ss_pred CcccCEEEcCCCCEEEEEEecC--CCceEEEEECCCCCEEeCcCCCCcccceEEC--CCC---CEEEEEECCCCCcEEEE
Confidence 8899999999999888443210 23459999997 5554333567789999999 999 77887775 44 6888
Q ss_pred EeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCC---CcEEEEEcCCCCC
Q psy10778 496 WSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTE---GLVIIWESSSHNR 546 (556)
Q Consensus 496 wd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D---g~V~vwdl~~~~~ 546 (556)
||+.+++. ..+. .+...+.+++|+|||++|++++.+ +.|++||+.+++.
T Consensus 296 ~d~~~~~~-~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 296 VNINGGAP-QRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EETTSSCC-EECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EECCCCCE-EEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 89887764 3444 456789999999999999988764 5899999988654
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=1.3e-18 Score=188.51 Aligned_cols=226 Identities=8% Similarity=0.004 Sum_probs=179.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEe--eeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEY--ELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~--~~~~~~~~~~~~~~~~~l~ 372 (556)
++++++.|++|++||..+++.+..+..++. +.+++++|+|++|++++.|++|++||+ .+. +.+..+.
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---------~~~~~i~ 219 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---------TKVAEIK 219 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC---------EEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC---------cEEEEEe
Confidence 778889999999999999988888875554 889999999999999999999999999 443 3345565
Q ss_pred CCCccEEEEEEcc----CCCEEEEEc-CCCcEEEEeCCCCeEEEEeCCCC----------CCCCeeEEEEeCCCCeEEEE
Q psy10778 373 GHSACVTDLYLCA----GFSVAVSSS-EDGTCLLWDINTIGYIREIPCVD----------PNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 373 ~h~~~V~~l~~s~----~~~~l~sgs-~Dg~I~iwdl~~~~~v~~l~~~h----------~~~~V~~l~~sp~~~~i~s~ 437 (556)
+...+..++|+| +|+++++++ .+++|.+||..+++.+.++.. + +...+..+.++|+++.+++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~-~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST-RGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC-CEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc-cCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 345679999999 999998888 489999999999999888764 2 02368899999988776655
Q ss_pred eecCcCCCCeEEEEEeC-Cc--EEEEeecCCCeEEEEEeeCCCCCcceEEEE-EeCCCeEEEEeCCCCeEEEEecCC---
Q psy10778 438 LQTTKTGGSILRLHTIN-AQ--LITSLASELRITSVTFSNAPEGVSQNVIVT-GHSDGTIQLWSGYKLAHLLTLNTN--- 510 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~-g~--~i~~~~~~~~i~~i~~s~~pdg~~~~~l~t-g~~dg~I~iwd~~~~~~~~~~~~~--- 510 (556)
.. .++.|.+||.. ++ .+..+.+...+.+++|+ |+| +++++ +..+++|.+||..+++++..+..+
T Consensus 298 ~~----~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~s--pdg---~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p 368 (543)
T 1nir_A 298 VK----ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWD--SSH---RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP 368 (543)
T ss_dssp ET----TTTEEEEEECTTSSSCEEEEEECCSSCCCEEEC--TTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB
T ss_pred EC----CCCeEEEEEecCCCcceeEEeccCcCccCceEC--CCC---CEEEEEecCCCeEEEEECCCCeEEEeeccCCCC
Confidence 43 78999999996 33 23355667788999999 899 66554 556899999999999999888742
Q ss_pred CCCCeEEEEEecC-CCEEEEEc-CCCcEEEEEcCC
Q psy10778 511 VALPVIAVTYSCD-SQHLYASN-TEGLVIIWESSS 543 (556)
Q Consensus 511 h~~~V~~l~~s~d-g~~l~sgs-~Dg~V~vwdl~~ 543 (556)
|.+....+ ++|+ +..++++. .|++|.+||+.+
T Consensus 369 h~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 369 HPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 54444443 5777 56666665 589999999988
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=7.3e-19 Score=177.76 Aligned_cols=227 Identities=11% Similarity=0.035 Sum_probs=172.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEE-EEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLW-LGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~-tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++++++.++.|++||..+++....+.......+..++|+|+|+.++ ++..++.|.+||+.++ +....+..
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~---------~~~~~~~~ 83 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC---------KNTFHANL 83 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT---------EEEEEEES
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC---------cEEEEEEc
Confidence 7788889999999999988777766644333678999999998665 4557899999998765 22233332
Q ss_pred -C-----CccEEEEEEccCCCEEEEEcCC------------CcEEEEeCCCCe---EEEEeCCCCCCCCeeEEEEeCCCC
Q psy10778 374 -H-----SACVTDLYLCAGFSVAVSSSED------------GTCLLWDINTIG---YIREIPCVDPNTPVSHVTMSETNG 432 (556)
Q Consensus 374 -h-----~~~V~~l~~s~~~~~l~sgs~D------------g~I~iwdl~~~~---~v~~l~~~h~~~~V~~l~~sp~~~ 432 (556)
+ ...+.+++|+|+|+.+++++.+ +.|.+||+.+++ .+..+.. ...+.+++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---PRQVYLMRAADDGS 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---CSSCCCEEECTTSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC---CCcccceeECCCCc
Confidence 2 2337789999999999988865 899999998843 3445554 35688999999999
Q ss_pred eEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC----------------------------------------------
Q psy10778 433 EIASVLQTTKTGGSILRLHTIN-AQLITSLASEL---------------------------------------------- 465 (556)
Q Consensus 433 ~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~---------------------------------------------- 465 (556)
+++++ . .|++||+. ++.+..+....
T Consensus 161 -l~~~~-----~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 161 -LYVAG-----P--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp -EEEES-----S--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred -EEEcc-----C--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 65554 2 39999986 66665543221
Q ss_pred -----------------------CeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe
Q psy10778 466 -----------------------RITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS 521 (556)
Q Consensus 466 -----------------------~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 521 (556)
.+.+++++ | +| ++++++ ++.|.+||+.+++.+..+.. ...+.+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--p~dg---~~l~~~--~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s 303 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGLRS--PKDP---NQIYGV--LNRLAKYDLKQRKLIKAANL--DHTYYCVAFD 303 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEEC--SSCT---TEEEEE--ESEEEEEETTTTEEEEEEEC--SSCCCEEEEC
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeEec--CCCC---CEEEEE--cCeEEEEECccCeEEEEEcC--CCCccceEEC
Confidence 34456677 7 88 778777 78999999999998888873 3457899999
Q ss_pred cCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 522 CDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 522 ~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
|+|+.|++++.++.|.+||+.+++.+..+
T Consensus 304 ~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 304 KKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEecCCCeEEEEeccccceeeee
Confidence 99998888899999999999987765554
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=4.1e-18 Score=171.63 Aligned_cols=231 Identities=13% Similarity=0.153 Sum_probs=165.7
Q ss_pred eEEeccCCCeEEEEeCC-CCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC-CcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSK-ELPATPVIRPPLGATIATATTAPDCHTLWLGLTS-GNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~-~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D-g~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+++.++.|+.|++|++. ++.........|...+.+++|+|+|++|++++.+ +.|.+|++.... +.. +.+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~--~~~---~~~~~~~ 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD--GAL---TFAAESA 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT--CCE---EEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC--Cce---eeccccc
Confidence 55566889999999985 3333333333577789999999999999998876 999999997221 010 1223444
Q ss_pred CCCccEEEEEEccCCCEEEEEc-CCCcEEEEeC---CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSS-EDGTCLLWDI---NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl---~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
.+. .+.+++|+|+++.+++++ .++.|.+||+ ..++.+..+.. ...+.+++|+|+++.+++++. .++.|
T Consensus 82 ~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~----~~~~v 153 (343)
T 1ri6_A 82 LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG---LDGCHSANISPDNRTLWVPAL----KQDRI 153 (343)
T ss_dssp CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC---CTTBCCCEECTTSSEEEEEEG----GGTEE
T ss_pred cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC---CCCceEEEECCCCCEEEEecC----CCCEE
Confidence 444 788999999999776554 5899999999 44456666665 467899999999998887753 57899
Q ss_pred EEEEeC--CcEEE----Ee--ecCCCeEEEEEeeCCCCCcceEEE-EEeCCCeEEEEeCCC--CeE--EEEecC---CC-
Q psy10778 449 RLHTIN--AQLIT----SL--ASELRITSVTFSNAPEGVSQNVIV-TGHSDGTIQLWSGYK--LAH--LLTLNT---NV- 511 (556)
Q Consensus 449 ~iwdi~--g~~i~----~~--~~~~~i~~i~~s~~pdg~~~~~l~-tg~~dg~I~iwd~~~--~~~--~~~~~~---~h- 511 (556)
++||++ ++... .. .....+.+++|+ |++ ++++ ++..++.|.+|++.. ++. ...+.. ++
T Consensus 154 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pdg---~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 154 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH--PNE---QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp EEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC--TTS---SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred EEEEecCCCceeeecccccccCCCCCcceEEEC--CCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 999996 44322 22 234578899999 888 6554 555889999999943 332 233321 11
Q ss_pred -CCCeEEEEEecCCCEEE-EEcCCCcEEEEEcCC
Q psy10778 512 -ALPVIAVTYSCDSQHLY-ASNTEGLVIIWESSS 543 (556)
Q Consensus 512 -~~~V~~l~~s~dg~~l~-sgs~Dg~V~vwdl~~ 543 (556)
...+.+++|+|+|+.|+ ++..++.|.+|++..
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 34677899999998877 455789999999983
No 136
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=1.6e-18 Score=182.79 Aligned_cols=206 Identities=17% Similarity=0.192 Sum_probs=156.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCc-------ccccccCCCeEeeCCCccEEEEEEccCCCEEE----E
Q psy10778 324 GATIATATTAPDCHTLWLGLTSGNILVYEYELNAST-------NKIEFCKPPTILLGHSACVTDLYLCAGFSVAV----S 392 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~-------~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~----s 392 (556)
...++.+++++++.++++|+.|+ +++|+....... ........ .....+...|++++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQ-GLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCC-CEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCc-cccccCCCcccEEEEcCCCCEEEEEEec
Confidence 34578999999999999999888 889876432110 00000011 12234677899999999999999 8
Q ss_pred EcCCCcEEEEeCCCC--------e---EEEEeCCCCCCCCeeEEEEeCC-CCeEEEEeecCcCCCCeEEEEEeC-CcEEE
Q psy10778 393 SSEDGTCLLWDINTI--------G---YIREIPCVDPNTPVSHVTMSET-NGEIASVLQTTKTGGSILRLHTIN-AQLIT 459 (556)
Q Consensus 393 gs~Dg~I~iwdl~~~--------~---~v~~l~~~h~~~~V~~l~~sp~-~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~ 459 (556)
|+.|++|++||+.++ + .++.+.+ | ...|.+++|+|+ +..+++++ .|++|++||++ +..+.
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h-~~~V~~v~~~p~~~~~las~s-----~Dg~v~iwD~~~~~~~~ 186 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD-A-GGMVIDMKWNPTVPSMVAVCL-----ADGSIAVLQVTETVKVC 186 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS-G-GGSEEEEEECSSCTTEEEEEE-----TTSCEEEEEESSSEEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCC-C-CCceEEEEECCCCCCEEEEEE-----CCCeEEEEEcCCCccee
Confidence 899999999998754 1 2455666 8 889999999998 78889898 89999999998 43333
Q ss_pred -EeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC------CCCCCeEEEEEecCCCEEEE-Ec
Q psy10778 460 -SLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT------NVALPVIAVTYSCDSQHLYA-SN 531 (556)
Q Consensus 460 -~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~------~h~~~V~~l~~s~dg~~l~s-gs 531 (556)
...|...+.+++|+ |+| ++|++|+.||.|++||.+ ++....+.. .|...|.+++|++++.++++ ++
T Consensus 187 ~~~~~~~~v~~v~ws--pdg---~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~ 260 (434)
T 2oit_A 187 ATLPSTVAVTSVCWS--PKG---KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA 260 (434)
T ss_dssp EEECGGGCEEEEEEC--TTS---SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred eccCCCCceeEEEEc--CCC---CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc
Confidence 33467899999999 889 899999999999999997 666665542 12238999999999877754 33
Q ss_pred CCC------cEEEEEcCCC
Q psy10778 532 TEG------LVIIWESSSH 544 (556)
Q Consensus 532 ~Dg------~V~vwdl~~~ 544 (556)
.|| .+++|++.+.
T Consensus 261 ~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 261 ADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTCCSSSCCEEEEEECCCT
T ss_pred CCCccCCCCceEEEEeccC
Confidence 443 3899999874
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=5.4e-18 Score=183.70 Aligned_cols=228 Identities=16% Similarity=0.170 Sum_probs=179.9
Q ss_pred eEEeccCCCeEEEEeC--CCCCCcceEcCCCCCceEEEEEcC----CCCEEEEEe-CCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMS--KELPATPVIRPPLGATIATATTAP----DCHTLWLGL-TSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~--~~~~~~~~~~~~h~~~V~~i~~s~----dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
++.+++.|++|++||+ .+++.+..+. +...+..++|+| +|+++++++ .+++|.+||..+. ++
T Consensus 192 ~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~---------~~ 260 (543)
T 1nir_A 192 YLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL---------EP 260 (543)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC---------CE
T ss_pred EEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc---------cc
Confidence 7777788899999999 7776666665 456789999999 999999998 4899999997655 33
Q ss_pred CeEeeC----------CC-ccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEE--EeCCCCCCCCeeEEEEeCCCCe
Q psy10778 368 PTILLG----------HS-ACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIR--EIPCVDPNTPVSHVTMSETNGE 433 (556)
Q Consensus 368 ~~~l~~----------h~-~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~--~l~~~h~~~~V~~l~~sp~~~~ 433 (556)
+..+.. |. ..+.++.+++++. ++++...++.|.+||+.+++.+. .+.. ...+..++|+|++++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~---~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA---APFLHDGGWDSSHRY 337 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC---CSSCCCEEECTTSCE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc---CcCccCceECCCCCE
Confidence 444443 22 3789999999776 56778889999999998865443 5543 567889999999998
Q ss_pred EEEEeecCcCCCCeEEEEEeC-CcEEEEee-----cCCCeEEEEEeeCCC-CCcceEEEEEe-CCCeEEEEeCCC-----
Q psy10778 434 IASVLQTTKTGGSILRLHTIN-AQLITSLA-----SELRITSVTFSNAPE-GVSQNVIVTGH-SDGTIQLWSGYK----- 500 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-----~~~~i~~i~~s~~pd-g~~~~~l~tg~-~dg~I~iwd~~~----- 500 (556)
+++++. .+++|.+||+. ++++..+. |.+....+ ++ |+ + .+++++. .|++|.+||+.+
T Consensus 338 l~va~~----~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~--p~~g---~~~~s~~~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 338 FMTAAN----NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH--PKYG---PVWSTSHLGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp EEEEEG----GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE--TTTE---EEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred EEEEec----CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC--CCCc---cEEEeccCCCceEEEEEeCCCCCch
Confidence 877663 57899999997 78777775 33333333 35 66 5 6777776 689999999988
Q ss_pred --CeEEEEecCCCCCCeEEEEEecCCCEEEEEc-------CCCcEEEEEcCCCCCc
Q psy10778 501 --LAHLLTLNTNVALPVIAVTYSCDSQHLYASN-------TEGLVIIWESSSHNRT 547 (556)
Q Consensus 501 --~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs-------~Dg~V~vwdl~~~~~~ 547 (556)
++.++++. .|...+..++++|+++.|++++ .+++|.|||+.+.+..
T Consensus 408 ~~~~~v~~l~-~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 408 YAWKKVAELQ-GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TBTSEEEEEE-CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred hcCeEEEEEE-cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 89999998 7778889999999999999987 2779999999997765
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=1.9e-17 Score=167.82 Aligned_cols=223 Identities=11% Similarity=0.097 Sum_probs=174.2
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeCCCc----
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLGHSA---- 376 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~---- 376 (556)
++.|.+||..+++....+.. ...+.+++++++|+.++++ ..++.|.+||..++ +.+..+..+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---------~~~~~~~~~~~~~~~ 136 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG---------EVKGRLVLDDRKRTE 136 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC---------CEEEEEESCCCCCCS
T ss_pred CccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC---------eeEEEEecCCCcccc
Confidence 78999999998887776653 3457789999999966554 55799999998765 33344444332
Q ss_pred -----cEEEEEEccCCCEEEEEc--CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 377 -----CVTDLYLCAGFSVAVSSS--EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 377 -----~V~~l~~s~~~~~l~sgs--~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
.+.+++|+|+++.+++++ .++.|.+||+.+++.+..+.. + ...+..++|+|+++.+++++ .++.|.
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~-----~~~~i~ 209 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-T-GKMSTGLALDSEGKRLYTTN-----ADGELI 209 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-C-CTTCCCCEEETTTTEEEEEC-----TTSEEE
T ss_pred ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-C-CCccceEEECCCCCEEEEEc-----CCCeEE
Confidence 278999999999777665 588999999999999999885 4 56689999999999999988 789999
Q ss_pred EEEeC-CcEEEEeec-----CCCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEec
Q psy10778 450 LHTIN-AQLITSLAS-----ELRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSC 522 (556)
Q Consensus 450 iwdi~-g~~i~~~~~-----~~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~ 522 (556)
+||+. ++.+..+.. ...+.+++|+ |+| +.+++++ .++.|.+||..+++.+..+..+ . ..+++|+|
T Consensus 210 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~-~~~~~~s~ 281 (353)
T 3vgz_A 210 TIDTADNKILSRKKLLDDGKEHFFINISLD--TAR---QRAFITDSKAAEVLVVDTRNGNILAKVAAP--E-SLAVLFNP 281 (353)
T ss_dssp EEETTTTEEEEEEECCCSSSCCCEEEEEEE--TTT---TEEEEEESSSSEEEEEETTTCCEEEEEECS--S-CCCEEEET
T ss_pred EEECCCCeEEEEEEcCCCCCCcccceEEEC--CCC---CEEEEEeCCCCEEEEEECCCCcEEEEEEcC--C-CceEEECC
Confidence 99997 666666643 4467889999 888 6555554 5599999999999998888732 2 25799999
Q ss_pred CCCEEEEEc-CCCcEEEEEcCCCCCcCee
Q psy10778 523 DSQHLYASN-TEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 523 dg~~l~sgs-~Dg~V~vwdl~~~~~~~~~ 550 (556)
+|+.+++++ .++.|.+||+.+++.+..+
T Consensus 282 dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 282 ARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 999665554 7899999999887655444
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=2.8e-17 Score=165.47 Aligned_cols=229 Identities=10% Similarity=0.098 Sum_probs=160.1
Q ss_pred eEEeccC-CCeEEEEeCC--CCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC-CCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNEC-DNLIRLKMSK--ELPATPVIRPPLGATIATATTAPDCHTLWLGLT-SGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~-Dg~I~lw~~~--~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
++++++. ++.|++|++. +++............+.+++|+|+|++|++++. ++.|.+|++..+ ... +....
T Consensus 51 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~~-----~~~~~ 124 (343)
T 1ri6_A 51 YLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG-LPV-----GVVDV 124 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT-EEE-----EEEEE
T ss_pred EEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC-ccc-----ccccc
Confidence 4444444 5999999987 554333222222337889999999998877664 889999999511 000 22233
Q ss_pred eeCCCccEEEEEEccCCCEEEEEc-CCCcEEEEeCCC-CeEEE----EeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSS-EDGTCLLWDINT-IGYIR----EIPCVDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~~-~~~v~----~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
+..+ ..+.+++|+|+++.+++++ .++.|.+||+.+ ++... .+.... ...+..++|+|+++.+++++. .
T Consensus 125 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~~----~ 198 (343)
T 1ri6_A 125 VEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVNE----L 198 (343)
T ss_dssp ECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTTSSEEEEEET----T
T ss_pred ccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCCCCEEEEEeC----C
Confidence 3333 4588999999999777776 899999999987 64432 222202 467889999999997766653 6
Q ss_pred CCeEEEEEeC---CcE--EEEee---c----CCCeEEEEEeeCCCCCcceEEE-EEeCCCeEEEEeCC----CCeEEEEe
Q psy10778 445 GSILRLHTIN---AQL--ITSLA---S----ELRITSVTFSNAPEGVSQNVIV-TGHSDGTIQLWSGY----KLAHLLTL 507 (556)
Q Consensus 445 d~~I~iwdi~---g~~--i~~~~---~----~~~i~~i~~s~~pdg~~~~~l~-tg~~dg~I~iwd~~----~~~~~~~~ 507 (556)
++.|.+|+++ ++. ..... . ...+.+++|+ |+| ++|+ ++..++.|.+||+. ..+.+..+
T Consensus 199 ~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s--~dg---~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~ 273 (343)
T 1ri6_A 199 NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT--PDG---RHLYACDRTASLITVFSVSEDGSVLSKEGFQ 273 (343)
T ss_dssp TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC--TTS---SEEEEEETTTTEEEEEEECTTSCCEEEEEEE
T ss_pred CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC--CCC---CEEEEEecCCCEEEEEEEcCCCCceEEeeee
Confidence 8899999995 322 22222 1 2356789999 888 6665 55579999999997 34555566
Q ss_pred cCCCCCCeEEEEEecCCCEEEEEc-CCCcEEEEEcC
Q psy10778 508 NTNVALPVIAVTYSCDSQHLYASN-TEGLVIIWESS 542 (556)
Q Consensus 508 ~~~h~~~V~~l~~s~dg~~l~sgs-~Dg~V~vwdl~ 542 (556)
. .+ ..+.+++|+|+|+.|++++ .++.|.+|++.
T Consensus 274 ~-~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 274 P-TE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp E-CS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred c-CC-CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 5 33 3488999999999888887 68999999664
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.79 E-value=4e-17 Score=165.76 Aligned_cols=225 Identities=8% Similarity=0.048 Sum_probs=160.6
Q ss_pred CCCeEEEEeCCCCCCcceEc-CCCCCceEEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccCCCeEeeC-----
Q psy10778 301 CDNLIRLKMSKELPATPVIR-PPLGATIATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCKPPTILLG----- 373 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~-~~h~~~V~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~----- 373 (556)
.++.|++|++.++....... ..+...+..++|+|+|++|++++ .++.|.+|++..... . ..+..+..
T Consensus 61 ~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~---~---~~~~~~~~~~~~p 134 (347)
T 3hfq_A 61 DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA---L---TLTDTVQHSGHGP 134 (347)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC---E---EEEEEEECCCCCS
T ss_pred CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC---e---eecceeecCCCCC
Confidence 47899999997665333222 23567788999999999998887 779999999963211 0 11122211
Q ss_pred ----CCccEEEEEEccCCCEEEEEcCCCcEEEEeCC-CCeEE--EEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC
Q psy10778 374 ----HSACVTDLYLCAGFSVAVSSSEDGTCLLWDIN-TIGYI--REIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS 446 (556)
Q Consensus 374 ----h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~-~~~~v--~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~ 446 (556)
+...+.+++|+|+|+++++...++.|.+||+. +++.. ..+.. +....+..++|+|+|+++++++. .++
T Consensus 135 ~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~~~~spdg~~l~v~~~----~~~ 209 (347)
T 3hfq_A 135 RPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTM-EAGFGPRHLVFSPDGQYAFLAGE----LSS 209 (347)
T ss_dssp STTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEET----TTT
T ss_pred CccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEc-CCCCCCceEEECCCCCEEEEEeC----CCC
Confidence 23358899999999977777789999999998 55432 22232 21457889999999997777653 678
Q ss_pred eEEEEEeC---CcE--EEEeec-C------CCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCC---CCeEEEEecCC
Q psy10778 447 ILRLHTIN---AQL--ITSLAS-E------LRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGY---KLAHLLTLNTN 510 (556)
Q Consensus 447 ~I~iwdi~---g~~--i~~~~~-~------~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~---~~~~~~~~~~~ 510 (556)
.|.+|+++ ++. +..... . ..+..++|+ |+| ++| +++..++.|.+|++. ..+.+..+. .
T Consensus 210 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s--pdG---~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~ 283 (347)
T 3hfq_A 210 QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS--HDG---HFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-T 283 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC--TTS---CEEEEEEETTTEEEEEEECGGGCEEEEEEEE-C
T ss_pred EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC--CCC---CEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-c
Confidence 99999986 332 222221 1 458899999 999 666 566678999999986 235555665 4
Q ss_pred CCCCeEEEEEecCCCEEEEEcCC-CcEEEEEcC
Q psy10778 511 VALPVIAVTYSCDSQHLYASNTE-GLVIIWESS 542 (556)
Q Consensus 511 h~~~V~~l~~s~dg~~l~sgs~D-g~V~vwdl~ 542 (556)
+...+.+++|+|||++|++++.+ +.|.+|++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 55678999999999988887754 899999664
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=3.5e-17 Score=164.64 Aligned_cols=227 Identities=9% Similarity=0.046 Sum_probs=166.2
Q ss_pred eEEeccCCCeEEEEeCCCCCC-cceEcCCCCCceEEEEEcCCCCEEEEEeCCC---cEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELPA-TPVIRPPLGATIATATTAPDCHTLWLGLTSG---NILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~-~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg---~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+++.+..++.|++||..+++. ...+. .+.....+++|+|+|++++++..++ .|.+||+..+ +.+..
T Consensus 54 l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~---------~~~~~ 123 (331)
T 3u4y_A 54 VVVTSDFCQTLVQIETQLEPPKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKN---------KFIST 123 (331)
T ss_dssp EEEEESTTCEEEEEECSSSSCEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTT---------EEEEE
T ss_pred EEEEeCCCCeEEEEECCCCceeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCC---------CeEEE
Confidence 566666789999999998876 44443 4445554599999999999665553 8999998765 23344
Q ss_pred eeCCCccEEEEEEccCCCE-EEEEcCCCc-EEEEeCCCCeEE-----EEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC
Q psy10778 371 LLGHSACVTDLYLCAGFSV-AVSSSEDGT-CLLWDINTIGYI-----REIPCVDPNTPVSHVTMSETNGEIASVLQTTKT 443 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~-l~sgs~Dg~-I~iwdl~~~~~v-----~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~ 443 (556)
+.. .....+++|+|+|+. ++++..++. +.+|++.....+ ..+.. ...+..++|+|+++.+++++.
T Consensus 124 ~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~---- 195 (331)
T 3u4y_A 124 IPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG---GTRPFNITFTPDGNFAFVANL---- 195 (331)
T ss_dssp EEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS---SSSEEEEEECTTSSEEEEEET----
T ss_pred EEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC---CCCccceEECCCCCEEEEEeC----
Confidence 443 345689999999984 455566688 999998754322 33333 567899999999997766653
Q ss_pred CCCeEEEEEeC-CcE---EEEeecCCCeEEEEEeeCCCCCcceEEEEE-eCCCeEEEEeCCCCeE--EEEecCC---CCC
Q psy10778 444 GGSILRLHTIN-AQL---ITSLASELRITSVTFSNAPEGVSQNVIVTG-HSDGTIQLWSGYKLAH--LLTLNTN---VAL 513 (556)
Q Consensus 444 ~d~~I~iwdi~-g~~---i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg-~~dg~I~iwd~~~~~~--~~~~~~~---h~~ 513 (556)
.++.|++||++ ++. +..+.....+.+++|+ |+| ++++++ ..++.|.+||..+++. +..+... +..
T Consensus 196 ~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~s--pdg---~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T 3u4y_A 196 IGNSIGILETQNPENITLLNAVGTNNLPGTIVVS--RDG---STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPR 270 (331)
T ss_dssp TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEEC--TTS---SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCG
T ss_pred CCCeEEEEECCCCcccceeeeccCCCCCceEEEC--CCC---CEEEEEEcCCCEEEEEECCCCceeeecccccccccCCC
Confidence 67899999997 666 7777777888999999 899 766554 4578899999998877 4444311 112
Q ss_pred ---CeEEEEEecCCCEEEEEc-CCCcEEEEEcCCC
Q psy10778 514 ---PVIAVTYSCDSQHLYASN-TEGLVIIWESSSH 544 (556)
Q Consensus 514 ---~V~~l~~s~dg~~l~sgs-~Dg~V~vwdl~~~ 544 (556)
....++|+|||+.|++++ .++.|.+||+.+.
T Consensus 271 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 271 PLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp GGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 235689999999886554 5679999999773
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=1.2e-17 Score=163.89 Aligned_cols=218 Identities=11% Similarity=-0.021 Sum_probs=162.9
Q ss_pred eEEeccCCCeEEEEeCCC-CCCcceEcCCCCCceEEEEEcCCCCEEEEEe--CCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNECDNLIRLKMSKE-LPATPVIRPPLGATIATATTAPDCHTLWLGL--TSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~-~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs--~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
++++++ ++.|++|+..+ ++........+...+.+++|+|+|++|++++ .++...||.++... .....+
T Consensus 55 ~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~--------~~~~~~ 125 (297)
T 2ojh_A 55 YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG--------GTPRLM 125 (297)
T ss_dssp EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC--------CCCEEC
T ss_pred EEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC--------CceEEe
Confidence 566655 88999999998 7666555433357889999999999999998 44678888776431 122334
Q ss_pred eCCCccEEEEEEccCCCEEE-EEcCCCcEEEEeCCC-CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 372 LGHSACVTDLYLCAGFSVAV-SSSEDGTCLLWDINT-IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~-sgs~Dg~I~iwdl~~-~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
..+. .+.+++|+|+++.++ +++.++.+.+|++.. ......+.. + ...+.+++|+|+++.+++++. .++.++
T Consensus 126 ~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~~----~~~~~~ 198 (297)
T 2ojh_A 126 TKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH-G-EGRNDGPDYSPDGRWIYFNSS----RTGQMQ 198 (297)
T ss_dssp CSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC-S-SSCEEEEEECTTSSEEEEEEC----TTSSCE
T ss_pred ecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc-C-CCccccceECCCCCEEEEEec----CCCCcc
Confidence 4343 488999999999776 788899999998532 233455655 6 788999999999998887762 478888
Q ss_pred EEEeC--CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCC-----------CeEEEEeCCCCeE--EEEecCCCCC
Q psy10778 450 LHTIN--AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSD-----------GTIQLWSGYKLAH--LLTLNTNVAL 513 (556)
Q Consensus 450 iwdi~--g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----------g~I~iwd~~~~~~--~~~~~~~h~~ 513 (556)
+|+++ +..+..+ .+...+.+++|+ |+| ++|++++.+ +.|++||+.+++. +..+. +|..
T Consensus 199 i~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~ 272 (297)
T 2ojh_A 199 IWRVRVDGSSVERITDSAYGDWFPHPS--PSG---DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF-GGQG 272 (297)
T ss_dssp EEEEETTSSCEEECCCCSEEEEEEEEC--TTS---SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE-ESTT
T ss_pred EEEECCCCCCcEEEecCCcccCCeEEC--CCC---CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC-CCCc
Confidence 88875 4444444 455678899999 899 788877755 5699999987765 34443 5678
Q ss_pred CeEEEEEecCCCEEEEEcCCC
Q psy10778 514 PVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 514 ~V~~l~~s~dg~~l~sgs~Dg 534 (556)
.+.+++|+|+++.|++++.+.
T Consensus 273 ~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 273 TMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TSCSCCBCTTSSEEEEEEECC
T ss_pred ccccceECCCCCEEEEEEecc
Confidence 899999999999998877653
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.3e-17 Score=175.81 Aligned_cols=235 Identities=12% Similarity=0.053 Sum_probs=161.4
Q ss_pred eEEeccCCCeEEEEeCCCC--------CCcc------eEcCCCCCceEEEEEcCCCCEEE----EEeCCCcEEEEEeeec
Q psy10778 295 MICWNECDNLIRLKMSKEL--------PATP------VIRPPLGATIATATTAPDCHTLW----LGLTSGNILVYEYELN 356 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--------~~~~------~~~~~h~~~V~~i~~s~dg~~l~----tgs~Dg~I~vwd~~~~ 356 (556)
+++.|+.|+ +++|+.... .... .....+...|++++|+|+|++|+ +|+.|++|+|||+...
T Consensus 50 ~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~ 128 (434)
T 2oit_A 50 LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF 128 (434)
T ss_dssp EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEcccc
Confidence 677777777 777654211 0001 11124567899999999999999 7889999999998764
Q ss_pred cCcc-cc-cccCCCeEeeCCCccEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCe
Q psy10778 357 ASTN-KI-EFCKPPTILLGHSACVTDLYLCAG-FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGE 433 (556)
Q Consensus 357 ~~~~-~~-~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~ 433 (556)
.... .. ........+.+|...|++++|+|+ +.++++++.||+|++||++++..+..... | ...|.+++|+|+|.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~-~-~~~v~~v~wspdg~~ 206 (434)
T 2oit_A 129 SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP-S-TVAVTSVCWSPKGKQ 206 (434)
T ss_dssp HCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC-G-GGCEEEEEECTTSSC
T ss_pred ccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC-C-CCceeEEEEcCCCCE
Confidence 1100 00 000113456789999999999998 78999999999999999999877766666 7 789999999999999
Q ss_pred EEEEeecCcCCCCeEEEEEeCCcEEEEeec--------CCCeEEEEEeeCCCCCcceEEEE-EeCCC------eEEEEeC
Q psy10778 434 IASVLQTTKTGGSILRLHTINAQLITSLAS--------ELRITSVTFSNAPEGVSQNVIVT-GHSDG------TIQLWSG 498 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~g~~i~~~~~--------~~~i~~i~~s~~pdg~~~~~l~t-g~~dg------~I~iwd~ 498 (556)
|++++ .|+.|++||++++....+.. ...+.+++|+ +++ .++++ +..+| .+++|++
T Consensus 207 lasgs-----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~--~~~---~~l~~~~~~dg~~~~~~~v~i~~l 276 (434)
T 2oit_A 207 LAVGK-----QNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWI--GTY---VFAIVYAAADGTLETSPDVVMALL 276 (434)
T ss_dssp EEEEE-----TTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEE--ETT---EEEEEEEETTCCSSSCCEEEEEEC
T ss_pred EEEEc-----CCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEe--cCc---eEEEEEccCCCccCCCCceEEEEe
Confidence 99999 89999999999766655532 1278999999 666 55544 43443 3899998
Q ss_pred CCCe-----EEEEecC------CCCCCeEEEEEecCCCEEEEEc-CCCcEEEEEcC
Q psy10778 499 YKLA-----HLLTLNT------NVALPVIAVTYSCDSQHLYASN-TEGLVIIWESS 542 (556)
Q Consensus 499 ~~~~-----~~~~~~~------~h~~~V~~l~~s~dg~~l~sgs-~Dg~V~vwdl~ 542 (556)
...+ ....+.. +...+-..+..-++.+++++++ ..+.|.|....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 277 PKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred ccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 7542 2222211 1122233344446766666544 34556666543
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.77 E-value=1.6e-16 Score=160.88 Aligned_cols=218 Identities=13% Similarity=0.086 Sum_probs=172.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCC--------ceEEEEEcCCCCEEEEEe--CCCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGA--------TIATATTAPDCHTLWLGL--TSGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~--------~V~~i~~s~dg~~l~tgs--~Dg~I~vwd~~~~~~~~~~~~ 364 (556)
+++.+..++.|.+||..+++....+...+.. .+.+++|+|+|+.+++++ .++.|.+||..++
T Consensus 103 l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-------- 174 (353)
T 3vgz_A 103 LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-------- 174 (353)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT--------
T ss_pred EEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC--------
Confidence 6667777899999999998877776643322 278999999999888776 4788999998765
Q ss_pred cCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCC---CCCCCeeEEEEeCCCCeEEEEeecC
Q psy10778 365 CKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCV---DPNTPVSHVTMSETNGEIASVLQTT 441 (556)
Q Consensus 365 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~---h~~~~V~~l~~sp~~~~i~s~s~~~ 441 (556)
+....+..+...+.+++|+|+++.+++++.++.+.+||+.+++.+..+... + ...+..++++|+++.+++++.
T Consensus 175 -~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-- 250 (353)
T 3vgz_A 175 -KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK-EHFFINISLDTARQRAFITDS-- 250 (353)
T ss_dssp -EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS-CCCEEEEEEETTTTEEEEEES--
T ss_pred -ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC-CcccceEEECCCCCEEEEEeC--
Confidence 333555545666889999999999999999999999999999888776530 2 345788999999998877763
Q ss_pred cCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEE
Q psy10778 442 KTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVT 519 (556)
Q Consensus 442 ~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~ 519 (556)
.++.|.+||+. ++.+..+..... .+++|+ |+| +.+ ++...++.|.+||..+++.+..+.. ...+.+++
T Consensus 251 --~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s--~dg---~~l~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~ 320 (353)
T 3vgz_A 251 --KAAEVLVVDTRNGNILAKVAAPES-LAVLFN--PAR---NEAYVTHRQAGKVSVIDAKSYKVVKTFDT--PTHPNSLA 320 (353)
T ss_dssp --SSSEEEEEETTTCCEEEEEECSSC-CCEEEE--TTT---TEEEEEETTTTEEEEEETTTTEEEEEEEC--CSEEEEEE
T ss_pred --CCCEEEEEECCCCcEEEEEEcCCC-ceEEEC--CCC---CEEEEEECCCCeEEEEECCCCeEEEEEec--CCCCCeEE
Confidence 56899999996 777777765443 679999 888 644 5555789999999999999988872 45789999
Q ss_pred EecCCCEEEEEcCCC
Q psy10778 520 YSCDSQHLYASNTEG 534 (556)
Q Consensus 520 ~s~dg~~l~sgs~Dg 534 (556)
|+|+|++|+++..++
T Consensus 321 ~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 321 LSADGKTLYVSVKQK 335 (353)
T ss_dssp ECTTSCEEEEEEECC
T ss_pred EcCCCCEEEEEEccc
Confidence 999999877776653
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=7.3e-18 Score=188.58 Aligned_cols=229 Identities=13% Similarity=0.018 Sum_probs=166.4
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCC---ceEEEEEcCCCCEEEEEeCC---------CcEEEEEeeeccCcccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGA---TIATATTAPDCHTLWLGLTS---------GNILVYEYELNASTNKI 362 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~---~V~~i~~s~dg~~l~tgs~D---------g~I~vwd~~~~~~~~~~ 362 (556)
+++. +.||+|++|+..+++....+. .|.. .|.+++|+|||++|++++.+ +.+++||+.++..
T Consensus 30 ~~~~-~~dg~i~~~d~~~g~~~~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---- 103 (723)
T 1xfd_A 30 FIYR-EQKGTVRLWNVETNTSTVLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP---- 103 (723)
T ss_dssp BCCC-CSSSCEEEBCGGGCCCEEEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----
T ss_pred EEEE-eCCCCEEEEECCCCcEEEEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce----
Confidence 4444 689999999999988776664 4443 49999999999999999864 7888999887511
Q ss_pred cccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCe------------------eE
Q psy10778 363 EFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPV------------------SH 424 (556)
Q Consensus 363 ~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V------------------~~ 424 (556)
..+....+|...+..++|||+|+.|++++. +.|++||+.+++..+.... + ...+ .+
T Consensus 104 ---~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~-~-~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 104 ---QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVST-G-KEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp ---EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECC-C-BTTTEEEEECCHHHHHTTSSSSEE
T ss_pred ---EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecC-C-CCCceECcccceeEEEEeccCcce
Confidence 111222355566889999999999999886 7999999998877766654 3 3333 78
Q ss_pred EEEeCCCCeEEEEeecCc-----------------------------CCCCeEEEEEeC-CcEEEEeec-------CCCe
Q psy10778 425 VTMSETNGEIASVLQTTK-----------------------------TGGSILRLHTIN-AQLITSLAS-------ELRI 467 (556)
Q Consensus 425 l~~sp~~~~i~s~s~~~~-----------------------------~~d~~I~iwdi~-g~~i~~~~~-------~~~i 467 (556)
++|||||+.|++++.+.. ..+..|++||+. ++....+.. ...+
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~ 257 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYI 257 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcccee
Confidence 999999999998874310 012379999997 443344432 4578
Q ss_pred EEEEEeeCCCCCcceEEEEEeC----CCeEEEEeCCCCeEEEEecCCCCCCe----EEEEEecCCCEEEE--EcCCC---
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHS----DGTIQLWSGYKLAHLLTLNTNVALPV----IAVTYSCDSQHLYA--SNTEG--- 534 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~----dg~I~iwd~~~~~~~~~~~~~h~~~V----~~l~~s~dg~~l~s--gs~Dg--- 534 (556)
.+++|+ ||| ++|++... +..|++||+.+++....+...+...+ ..++|+|||+.|+. +..+|
T Consensus 258 ~~~~~S--pDg---~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 258 TMVKWA--TST---KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp EEEEES--SSS---EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred EEEEEe--CCC---eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 899999 999 78876643 35799999999887666542233433 37899999997764 45667
Q ss_pred ---cEEEEE
Q psy10778 535 ---LVIIWE 540 (556)
Q Consensus 535 ---~V~vwd 540 (556)
.|.+||
T Consensus 333 ~~~~l~~~d 341 (723)
T 1xfd_A 333 KFYHITVSS 341 (723)
T ss_dssp CEEEEEEEC
T ss_pred ceeEEEEEe
Confidence 567777
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.75 E-value=2.4e-17 Score=185.00 Aligned_cols=230 Identities=10% Similarity=0.045 Sum_probs=169.2
Q ss_pred eEEeccC-CC-----eEEEEeCCCCCCcceEcCC-CC----------------------CceEEEEEcCCCCEEEEEeCC
Q psy10778 295 MICWNEC-DN-----LIRLKMSKELPATPVIRPP-LG----------------------ATIATATTAPDCHTLWLGLTS 345 (556)
Q Consensus 295 ~l~~gs~-Dg-----~I~lw~~~~~~~~~~~~~~-h~----------------------~~V~~i~~s~dg~~l~tgs~D 345 (556)
+|++++. |+ .|++|+..+++........ +. ..|.+++|+|||++|++++.
T Consensus 50 ~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~- 128 (741)
T 2ecf_A 50 RVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG- 128 (741)
T ss_dssp EEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-
T ss_pred EEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-
Confidence 5666666 77 8999999988766555421 11 23889999999999999986
Q ss_pred CcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCC----
Q psy10778 346 GNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTP---- 421 (556)
Q Consensus 346 g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~---- 421 (556)
+.|++||+.++.. .....+..|...+.+++|+|+|+.|++++ ++.|.+||+.+++..+.... + ...
T Consensus 129 ~~i~~~d~~~~~~-------~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~-~-~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDLKQEGK-------AAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD-G-STTIGNG 198 (741)
T ss_dssp TEEEEEESSSCST-------TSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC-C-CSSEEES
T ss_pred CcEEEEECCCCCc-------ceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC-C-ccceecc
Confidence 9999999876400 02345677888999999999999999887 46899999998876655444 3 322
Q ss_pred ------------eeEEEEeCCCCeEEEEeecCcC----------------------------CCCeEEEEEeCC-cEEEE
Q psy10778 422 ------------VSHVTMSETNGEIASVLQTTKT----------------------------GGSILRLHTINA-QLITS 460 (556)
Q Consensus 422 ------------V~~l~~sp~~~~i~s~s~~~~~----------------------------~d~~I~iwdi~g-~~i~~ 460 (556)
+..++|+|||+.|++++.+... ....|++||+++ .....
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 4789999999999998732100 001788888865 43333
Q ss_pred ee----cCCCeEEEEEeeCCCCCcceEEEEEeC-----CCeEEEEeCCCCeEEEEecCCCCC----CeEEEEEecCCCEE
Q psy10778 461 LA----SELRITSVTFSNAPEGVSQNVIVTGHS-----DGTIQLWSGYKLAHLLTLNTNVAL----PVIAVTYSCDSQHL 527 (556)
Q Consensus 461 ~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~-----dg~I~iwd~~~~~~~~~~~~~h~~----~V~~l~~s~dg~~l 527 (556)
+. +...+.+++| + +| +.|++++. ++.|++||+.+++....+. .+.. .+.+++|+|||+++
T Consensus 279 ~~~~~~~~~~~~~~~~-p--Dg---~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 279 IDLGKEQDIYLARVNW-R--DP---QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH-ETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp ECCCSCSSEEEEEEEE-E--ET---TEEEEEEEETTSSEEEEEEEETTTCCEEEEEE-EECSSCCCCCSCCEECTTSCEE
T ss_pred ecCCCCcceEEEEEEe-C--CC---CEEEEEEecccCCeEEEEEEECCCCceEEEEE-cCCCCcCCcCCceEECCCCeEE
Confidence 32 4567889999 5 56 56665543 5789999999988776665 2322 45688999999999
Q ss_pred EEEcCCCcEEEEEcC
Q psy10778 528 YASNTEGLVIIWESS 542 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~ 542 (556)
++++.||.+.+|.+.
T Consensus 352 ~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 352 WSSERTGFQHLYRID 366 (741)
T ss_dssp EEECTTSSCEEEEEC
T ss_pred EEecCCCccEEEEEc
Confidence 999999988888876
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.73 E-value=1.5e-16 Score=177.51 Aligned_cols=230 Identities=9% Similarity=0.024 Sum_probs=167.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeee-----ccCcccccccCCCe
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYEL-----NASTNKIEFCKPPT 369 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~-----~~~~~~~~~~~~~~ 369 (556)
.++.+ .|+.|++||..+++..... .+...+.+++|+|||+.|+++ .|+.|++|++.+ + +...
T Consensus 94 ~~~~~-~~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g---------~~~~ 160 (706)
T 2z3z_A 94 LVVLF-TQGGLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS---------RAIA 160 (706)
T ss_dssp EEEEE-ETTEEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC---------CCEE
T ss_pred eEEEE-ECCEEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC---------CcEE
Confidence 44444 4599999999887655444 466778899999999999995 679999999986 4 1222
Q ss_pred EeeCCCc--------------cEEEEEEccCCCEEEEEc---------------------------------CCCcEEEE
Q psy10778 370 ILLGHSA--------------CVTDLYLCAGFSVAVSSS---------------------------------EDGTCLLW 402 (556)
Q Consensus 370 ~l~~h~~--------------~V~~l~~s~~~~~l~sgs---------------------------------~Dg~I~iw 402 (556)
....+.. .+.+++|+|||+.|++++ .++.|.+|
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 2222222 258899999999999987 45789999
Q ss_pred eCCCCeEEEEeC--CCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee---cCC---CeEEEEEe
Q psy10778 403 DINTIGYIREIP--CVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA---SEL---RITSVTFS 473 (556)
Q Consensus 403 dl~~~~~v~~l~--~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~---~~~---~i~~i~~s 473 (556)
|+.+++...... . + ...+..++|+|+|+.|++++.+.......|++||+. ++....+. ... .+.+++|+
T Consensus 241 d~~~~~~~~~~~~~~-~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 241 HLATGKTVYLQTGEP-K-EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp ETTTTEEEECCCCSC-T-TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred ECCCCceEeeccCCC-C-ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceee
Confidence 999887654432 3 4 567999999999999998773221122489999997 52443332 222 24678999
Q ss_pred eCC--CCCcceEEEEEeCCCeEEEEeCC-CCeEEEEecCCCCCCeEE-EEEecCCCEEEEEcC-CC----cEEEEEcCCC
Q psy10778 474 NAP--EGVSQNVIVTGHSDGTIQLWSGY-KLAHLLTLNTNVALPVIA-VTYSCDSQHLYASNT-EG----LVIIWESSSH 544 (556)
Q Consensus 474 ~~p--dg~~~~~l~tg~~dg~I~iwd~~-~~~~~~~~~~~h~~~V~~-l~~s~dg~~l~sgs~-Dg----~V~vwdl~~~ 544 (556)
| +| +++++++.+|.+++|++. +++.+..+. .+...+.+ ++|+|+|+.|+.++. ++ .|..|++.++
T Consensus 319 --p~~dg---~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 319 --PGSNN---QFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp --TTCSS---EEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred --cCCCC---EEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 8 99 899999999999999875 677778886 56677877 799999987765544 44 6777777664
Q ss_pred C
Q psy10778 545 N 545 (556)
Q Consensus 545 ~ 545 (556)
+
T Consensus 393 ~ 393 (706)
T 2z3z_A 393 K 393 (706)
T ss_dssp C
T ss_pred C
Confidence 3
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.71 E-value=1.1e-16 Score=179.51 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=155.7
Q ss_pred CCceEEEEEcCCCCEEEEEeC-CC-----cEEEEEeeeccCcccccccCCCeEeeCCC----------------------
Q psy10778 324 GATIATATTAPDCHTLWLGLT-SG-----NILVYEYELNASTNKIEFCKPPTILLGHS---------------------- 375 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~-Dg-----~I~vwd~~~~~~~~~~~~~~~~~~l~~h~---------------------- 375 (556)
...+.+++|+|||++|++++. |+ +|++||+.++ +....+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG---------QTRLLVDSKVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC---------CEEEEECGGGTC--------------------
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC---------ceeEccchhhcccccccccchhhhhhhhhhhc
Confidence 456899999999999999998 88 8999998765 2222333222
Q ss_pred --ccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCe--EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 376 --ACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIG--YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 376 --~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~--~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
..|.+++|+|||+.|++++. +.|.+||+.++. .++.+.. + ...+..++|+|||+.|++++ ++.|++|
T Consensus 107 ~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-~-~~~~~~~~~SPDG~~la~~~------~~~i~~~ 177 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH-G-EGFATDAKLSPKGGFVSFIR------GRNLWVI 177 (741)
T ss_dssp CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC-S-SSCEEEEEECTTSSEEEEEE------TTEEEEE
T ss_pred cccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc-C-CcccccccCCCCCCEEEEEe------CCcEEEE
Confidence 33789999999999999886 999999999872 4455666 6 78899999999999999986 5699999
Q ss_pred EeCC-cEEEEeecCCC-----------------eEEEEEeeCCCCCcceEEEEEeCCC----------------------
Q psy10778 452 TINA-QLITSLASELR-----------------ITSVTFSNAPEGVSQNVIVTGHSDG---------------------- 491 (556)
Q Consensus 452 di~g-~~i~~~~~~~~-----------------i~~i~~s~~pdg~~~~~l~tg~~dg---------------------- 491 (556)
|+.+ +.......... +.+++|+ ||| +.|++++.|+
T Consensus 178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~S--pDg---~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~ 252 (741)
T 2ecf_A 178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWA--PDD---SAIAYARIDESPVPVQKRYEVYADRTDVIEQR 252 (741)
T ss_dssp ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEEC--TTS---SCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred ecCCCCEEEeccCCccceeccccceeeeeccccccceEEC--CCC---CEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence 9984 44333222221 4789999 999 7888887665
Q ss_pred -----------eEEEEeCCC-CeEEEEecC-CCCCCeEEEEEecCCCEEEEEcC-----CCcEEEEEcCCCCCcCee
Q psy10778 492 -----------TIQLWSGYK-LAHLLTLNT-NVALPVIAVTYSCDSQHLYASNT-----EGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 492 -----------~I~iwd~~~-~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~-----Dg~V~vwdl~~~~~~~~~ 550 (556)
.|++||+.+ ++....... .|...+.+++| |||+.|++++. ++.|++||+.+++....+
T Consensus 253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 889999988 776554432 36778999999 99999987654 578999999887654433
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=1.4e-15 Score=169.80 Aligned_cols=228 Identities=12% Similarity=0.044 Sum_probs=162.7
Q ss_pred eEEeccCCCeEEEEeCCC-----CCCcceEcCCCCCc--------------eEEEEEcCCCCEEEEEe------------
Q psy10778 295 MICWNECDNLIRLKMSKE-----LPATPVIRPPLGAT--------------IATATTAPDCHTLWLGL------------ 343 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~-----~~~~~~~~~~h~~~--------------V~~i~~s~dg~~l~tgs------------ 343 (556)
.++++ .|+.|++|++.+ ++...... .+... +.+++|+|||++|++++
T Consensus 134 ~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~-~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~ 211 (706)
T 2z3z_A 134 RVAYV-RNHNLYIARGGKLGEGMSRAIAVTI-DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIV 211 (706)
T ss_dssp EEEEE-ETTEEEEEECBCTTSCCCCCEESCS-CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEE
T ss_pred EEEEE-ECCeEEEEecCcccccCCCcEEecc-CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEee
Confidence 56663 689999999988 76554433 22222 48999999999999997
Q ss_pred ---------------------CCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC-----
Q psy10778 344 ---------------------TSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG----- 397 (556)
Q Consensus 344 ---------------------~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg----- 397 (556)
.+..|++||+.++. .. .+.....|...+.+++|+|+|+.|++++.++
T Consensus 212 ~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~----~~---~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 212 DYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK----TV---YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp ECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE----EE---ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred ccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc----eE---eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 44678999987541 10 1111125777899999999999999887765
Q ss_pred cEEEEeCCCCeEEEEeC-CCCCCC---CeeEEEEeC--CCCeEEEEeecCcCCCCeEEEEEeC--CcEEEEee-cCCCeE
Q psy10778 398 TCLLWDINTIGYIREIP-CVDPNT---PVSHVTMSE--TNGEIASVLQTTKTGGSILRLHTIN--AQLITSLA-SELRIT 468 (556)
Q Consensus 398 ~I~iwdl~~~~~v~~l~-~~h~~~---~V~~l~~sp--~~~~i~s~s~~~~~~d~~I~iwdi~--g~~i~~~~-~~~~i~ 468 (556)
.|.+||+.+++..+.+. ..+ .. .+..++|+| +|+.++++. .++.+++|.++ +..+..+. +...+.
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~sp~~dg~~l~~~~-----~~g~~~l~~~~~~~~~~~~l~~~~~~v~ 358 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETD-KHYVEPLHPLTFLPGSNNQFIWQSR-----RDGWNHLYLYDTTGRLIRQVTKGEWEVT 358 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEEC-SSCCCCCSCCEECTTCSSEEEEEEC-----TTSSCEEEEEETTSCEEEECCCSSSCEE
T ss_pred EEEEEECCCCceeeEEEEccC-CCeECccCCceeecCCCCEEEEEEc-----cCCccEEEEEECCCCEEEecCCCCeEEE
Confidence 89999999984433332 101 22 346789999 999888776 77888888774 66666664 445576
Q ss_pred E-EEEeeCCCCCcceEEEE-EeCCC----eEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCC----CcEEE
Q psy10778 469 S-VTFSNAPEGVSQNVIVT-GHSDG----TIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTE----GLVII 538 (556)
Q Consensus 469 ~-i~~s~~pdg~~~~~l~t-g~~dg----~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D----g~V~v 538 (556)
+ ++|+ |+| +.|+. +..++ .|..||+.+++ ...+. +...+.+++|+|||+.++.++.+ +.|++
T Consensus 359 ~~~~~s--pdg---~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l 430 (706)
T 2z3z_A 359 NFAGFD--PKG---TRLYFESTEASPLERHFYCIDIKGGK-TKDLT--PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTV 430 (706)
T ss_dssp EEEEEC--TTS---SEEEEEESSSCTTCBEEEEEETTCCC-CEESC--CSSSEEEEEECTTSSEEEEEEECSSCSCEEEE
T ss_pred eeeEEc--CCC---CEEEEEecCCCCceEEEEEEEcCCCC-ceecc--CCCceEEEEECCCCCEEEEEecCCCCCcEEEE
Confidence 6 7999 888 55554 55554 67777877665 44554 56779999999999988876544 56999
Q ss_pred EEcCCCC
Q psy10778 539 WESSSHN 545 (556)
Q Consensus 539 wdl~~~~ 545 (556)
||+.+++
T Consensus 431 ~d~~~~~ 437 (706)
T 2z3z_A 431 TNIGKGS 437 (706)
T ss_dssp EESSSCE
T ss_pred EECCCCe
Confidence 9998765
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=2.2e-16 Score=172.42 Aligned_cols=221 Identities=10% Similarity=-0.021 Sum_probs=160.6
Q ss_pred eEEeccC-CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC---CCcEEEEEeee--ccCcccccccCCC
Q psy10778 295 MICWNEC-DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLT---SGNILVYEYEL--NASTNKIEFCKPP 368 (556)
Q Consensus 295 ~l~~gs~-Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~---Dg~I~vwd~~~--~~~~~~~~~~~~~ 368 (556)
.|++++. ||+++||++.+++.... ...+...+.+++|+|| +.+++++. +...++|.+.. .. ..
T Consensus 35 ~la~~s~~~g~~~lw~~~~g~~~~l-t~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g---------~~ 103 (582)
T 3o4h_A 35 KLLVVGFSEGSVNAYLYDGGETVKL-NREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG---------EE 103 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEC-CSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT---------CC
T ss_pred eEEEEEccCCceeEEEEcCCCcEee-ecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC---------cc
Confidence 5666665 99999999866554333 2233368999999999 77777775 56678888765 21 11
Q ss_pred eEeeCCCccEEEEEEccCCC--EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC
Q psy10778 369 TILLGHSACVTDLYLCAGFS--VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS 446 (556)
Q Consensus 369 ~~l~~h~~~V~~l~~s~~~~--~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~ 446 (556)
..+..+ ..+...+|+|+++ .+++++.+ .+.+||+.+++..+.... + . .+++|+|||+.|++++.+.. ..+
T Consensus 104 ~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~-~--~--~~~~~spDG~~la~~~~~~~-~~~ 175 (582)
T 3o4h_A 104 QRLEAV-KPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARL-P--G--FGFVSDIRGDLIAGLGFFGG-GRV 175 (582)
T ss_dssp EECTTS-CSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEE-S--S--CEEEEEEETTEEEEEEEEET-TEE
T ss_pred ccccCC-CCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecC-C--C--ceEEECCCCCEEEEEEEcCC-CCe
Confidence 122222 2234568888875 44455444 455999998876655554 3 3 88999999999998773210 116
Q ss_pred eEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCC--eEEEEeCCCCeEEEEecCCCCCCeEEEE----
Q psy10778 447 ILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDG--TIQLWSGYKLAHLLTLNTNVALPVIAVT---- 519 (556)
Q Consensus 447 ~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg--~I~iwd~~~~~~~~~~~~~h~~~V~~l~---- 519 (556)
.|++||+. |+......+...+.+++|+ ||| +.|+++..+| .|++||+.+++.. .+. +|...+.+++
T Consensus 176 ~i~~~d~~~g~~~~l~~~~~~~~~~~~S--pDG---~~l~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSGEGSFSSASIS--PGM---KVTAGLETAREARLVTVDPRDGSVE-DLE-LPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEETTTCCCEEECCSSCEEEEEEEC--TTS---CEEEEEECSSCEEEEEECTTTCCEE-ECC-CSCSHHHHHCCSEE
T ss_pred EEEEEcCCCCCceEeecCCCccccceEC--CCC---CEEEEccCCCeeEEEEEcCCCCcEE-Ecc-CCCcChhhhhhccc
Confidence 79999987 5544434567788999999 999 8899888888 8999999888877 555 6666777777
Q ss_pred ----EecCCCEEEEEcCCCcEEEEEc
Q psy10778 520 ----YSCDSQHLYASNTEGLVIIWES 541 (556)
Q Consensus 520 ----~s~dg~~l~sgs~Dg~V~vwdl 541 (556)
|+|||.++++++.||.+++|++
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999999999
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=1.8e-15 Score=153.56 Aligned_cols=225 Identities=13% Similarity=0.103 Sum_probs=154.0
Q ss_pred cCCCeEEEEeCC--CCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC---CCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 300 ECDNLIRLKMSK--ELPATPVIRPPLGATIATATTAPDCHTLWLGLT---SGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 300 s~Dg~I~lw~~~--~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~---Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.++.|.+|... +++........+...+..++|+|+|+ |++++. ++.|++|++..+. . +.+..+..+
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~----~---~~~~~~~~~ 84 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT----A---HKLNTVVAP 84 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE----E---EEEEEEEEE
T ss_pred CCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCc----E---EEeeeeecC
Confidence 346677777654 44443322224556778899999999 665554 6899999996541 0 223444557
Q ss_pred CccEEEEEEccCCCEEEEEc-CCCcEEEEeCCC---CeEEEEeCCCCCC--------CCeeEEEEeCCCCeEEEEeecCc
Q psy10778 375 SACVTDLYLCAGFSVAVSSS-EDGTCLLWDINT---IGYIREIPCVDPN--------TPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~~---~~~v~~l~~~h~~--------~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
...+..++|+|++++|++++ .++.+.+|++.. .+.+..+.. ... ..+.+++|+|+++.+++..
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~spdg~l~v~~~---- 159 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH-SGHGPRPEQDGSHIHYTDLTPDNRLAVIDL---- 159 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC-CCCCSSTTCSSCCEEEEEECTTSCEEEEET----
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec-CCCCCCccccCCCceEEEECCCCcEEEEeC----
Confidence 77889999999999888777 789999999962 233444432 101 2488999999999444444
Q ss_pred CCCCeEEEEEeC--CcEEEE--ee--cCCCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCCC--CeE--EEEecCCC
Q psy10778 443 TGGSILRLHTIN--AQLITS--LA--SELRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGYK--LAH--LLTLNTNV 511 (556)
Q Consensus 443 ~~d~~I~iwdi~--g~~i~~--~~--~~~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~~--~~~--~~~~~~~h 511 (556)
.++.|++|+++ |++... .. ....+..++|+ |+| +++ +++..++.|.+|++.. ++. +..+....
T Consensus 160 -~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s--pdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 160 -GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS--PDG---QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp -TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC--TTS---SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSC
T ss_pred -CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC--CCC---CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecC
Confidence 67899999997 443322 22 23478889999 899 655 4566789999999863 443 33333111
Q ss_pred -----CCCeEEEEEecCCCEEE-EEcCCCcEEEEEcCC
Q psy10778 512 -----ALPVIAVTYSCDSQHLY-ASNTEGLVIIWESSS 543 (556)
Q Consensus 512 -----~~~V~~l~~s~dg~~l~-sgs~Dg~V~vwdl~~ 543 (556)
...+..++|+|||++|+ ++..++.|.+|++..
T Consensus 234 ~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 234 ADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp TTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 14588999999999875 555689999999974
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.68 E-value=6.1e-16 Score=180.58 Aligned_cols=223 Identities=7% Similarity=-0.026 Sum_probs=174.3
Q ss_pred ceEEeccCCCeEEEEeCCC-CCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 294 GMICWNECDNLIRLKMSKE-LPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~-~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
.++..++.|+.++||.... +.....+. .|. .+.+.+|+|||+.|+++. ++.|++|+.... .+..+.
T Consensus 215 ~l~~~~~~dg~~~l~~~~~~g~~~~~l~-~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~----------~l~~l~ 281 (1045)
T 1k32_A 215 RIYFITDIDGFGQIYSTDLDGKDLRKHT-SFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE----------KIEKIE 281 (1045)
T ss_dssp EEEEEECTTSSCEEEEEETTSCSCEECC-CCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTC----------CEEECC
T ss_pred EEEEEEeccCceEEEEEeCCCCcceEec-CCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCce----------Eeeeec
Confidence 3666778889999997653 22233332 343 467789999999999885 899999997321 112222
Q ss_pred C-----------CCccEEEEEEc-cCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCC-CeeEEEEeCCCCeEEEEee
Q psy10778 373 G-----------HSACVTDLYLC-AGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNT-PVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 373 ~-----------h~~~V~~l~~s-~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~-~V~~l~~sp~~~~i~s~s~ 439 (556)
+ |...+.+++|+ |+|+.+++++ ++.+.+|++..++.. .+.. + .. .+..++|+ +++.+++++
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~-~-~~~~~~~~~~s-dg~~l~~~s- 355 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPE-P-LRIRYVRRGGD-TKVAFIHGT- 355 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSC-C-SCEEEEEECSS-SEEEEEEEE-
T ss_pred cCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccC-C-CcceEEeeeEc-CCCeEEEEE-
Confidence 2 45678999999 9999888887 889999999877644 4555 5 56 89999999 999999988
Q ss_pred cCcCCCCeEE-EEEeCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEE
Q psy10778 440 TTKTGGSILR-LHTINAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIA 517 (556)
Q Consensus 440 ~~~~~d~~I~-iwdi~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~ 517 (556)
.++.+. +|++.+.....+ .+...+.+++|+ |+| +.|++++.++.|++||+.+++...... +|...+.+
T Consensus 356 ----~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~S--pDG---~~la~~~~~~~v~~~d~~tg~~~~~~~-~~~~~v~~ 425 (1045)
T 1k32_A 356 ----REGDFLGIYDYRTGKAEKFEENLGNVFAMGVD--RNG---KFAVVANDRFEIMTVDLETGKPTVIER-SREAMITD 425 (1045)
T ss_dssp ----TTEEEEEEEETTTCCEEECCCCCCSEEEEEEC--TTS---SEEEEEETTSEEEEEETTTCCEEEEEE-CSSSCCCC
T ss_pred ----CCCceEEEEECCCCCceEecCCccceeeeEEC--CCC---CEEEEECCCCeEEEEECCCCceEEecc-CCCCCccc
Confidence 677888 899874433333 455789999999 999 899999999999999999998877775 68888999
Q ss_pred EEEecCCCEEEEEcCCC----------cEEEEEcCCCC
Q psy10778 518 VTYSCDSQHLYASNTEG----------LVIIWESSSHN 545 (556)
Q Consensus 518 l~~s~dg~~l~sgs~Dg----------~V~vwdl~~~~ 545 (556)
++|||||++|++++.++ .|++||+.+++
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 99999999998887654 89999998754
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=2.8e-14 Score=145.66 Aligned_cols=225 Identities=14% Similarity=0.065 Sum_probs=157.1
Q ss_pred cCCCeEEEEeC--CCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC----CcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 300 ECDNLIRLKMS--KELPATPVIRPPLGATIATATTAPDCHTLWLGLTS----GNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 300 s~Dg~I~lw~~--~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D----g~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+.++.|.+|.+ ++++....... +...+..++|+|+|++|++++.+ +.|.+|++.... +.. +.+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~--g~~---~~~~~~~~ 97 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK--GTL---HLLNTQKT 97 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT--TEE---EEEEEEEC
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC--CcE---EEeeEecc
Confidence 45778888866 45555444433 66778889999999999999876 799999987531 111 22334445
Q ss_pred CCccEEEEEEccCCCEEEEEc-CCCcEEEEeCCCCeEEE------EeCC-------CCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 374 HSACVTDLYLCAGFSVAVSSS-EDGTCLLWDINTIGYIR------EIPC-------VDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~~~~~v~------~l~~-------~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
+......+++ +++.+++++ .++.+.+|++.....+. ...+ .+ ...+.+++|+|+++++++++.
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~ 174 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQT-MPHLHCVRITPDGKYLLADDL 174 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCS-SCCEEEEEECTTSSEEEEEET
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccC-CCcceEEEECCCCCEEEEEeC
Confidence 5667778888 777666655 68999999997543221 1111 01 123578999999998777652
Q ss_pred cCcCCCCeEEEEEeC--C-----c-E-------EEEeecCCCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeCCCCeE
Q psy10778 440 TTKTGGSILRLHTIN--A-----Q-L-------ITSLASELRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSGYKLAH 503 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~--g-----~-~-------i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~~~~~ 503 (556)
.++.|.+|+++ + + + .........+..++|+ |+| +++++++ .++.|.+|++.+++.
T Consensus 175 ----~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s--pdg---~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 175 ----GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN--SDG---KFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp ----TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC--TTS---SEEEEEETTTCEEEEEEEETTEE
T ss_pred ----CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc--CCC---CEEEEEcCCCCeEEEEEecCCce
Confidence 57899999986 2 2 2 1222345678899999 999 7776666 689999999987654
Q ss_pred --EEEecC--CCCCCeEEEEEecCCCEEEEEcCC--CcEEEEEcC
Q psy10778 504 --LLTLNT--NVALPVIAVTYSCDSQHLYASNTE--GLVIIWESS 542 (556)
Q Consensus 504 --~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~D--g~V~vwdl~ 542 (556)
+..+.. .+...+.+++|+|||++|+++..+ +.|.+|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 333331 334567899999999998776654 899999996
No 154
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=1.7e-14 Score=145.78 Aligned_cols=225 Identities=8% Similarity=-0.001 Sum_probs=172.4
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe---------
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL--------- 371 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l--------- 371 (556)
.++.|.+||..+++........+......++++++|+++++...++.|++|+..... ..+..+
T Consensus 67 ~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~--------~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 67 EEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE--------GPLLILGRSMQPGSD 138 (329)
T ss_dssp CSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS--------CCSEEESBTTBCCCS
T ss_pred cCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe--------EEEEEecccCCCCCC
Confidence 568999999988877665554566688999999999988888889999999975420 123333
Q ss_pred eCCCccEEEEEEcc-CCCEEEEEc-CCCcEEEEeCCCCeEEEEeCCCCC---------CCCeeEEEEeCCCCeEEEEeec
Q psy10778 372 LGHSACVTDLYLCA-GFSVAVSSS-EDGTCLLWDINTIGYIREIPCVDP---------NTPVSHVTMSETNGEIASVLQT 440 (556)
Q Consensus 372 ~~h~~~V~~l~~s~-~~~~l~sgs-~Dg~I~iwdl~~~~~v~~l~~~h~---------~~~V~~l~~sp~~~~i~s~s~~ 440 (556)
.++.....+++++| ++.++++.+ .++.|++|| .+++.+..+.. .. -.....++++|+++.++++..
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~-~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~- 215 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGE-ESSGSSPRPGQFSVPHSLALVPHLDQLCVADR- 215 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECE-ECCSSSCCTTEESCEEEEEEETTTTEEEEEET-
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEecc-CCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-
Confidence 34555789999999 788888886 699999999 55777777753 20 123889999999555544432
Q ss_pred CcCCCCeEEEEEeC-CcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEE-------eCCCeEEEEeCCCCeEEEEecC
Q psy10778 441 TKTGGSILRLHTIN-AQLITSLA---SELRITSVTFSNAPEGVSQNVIVTG-------HSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 441 ~~~~d~~I~iwdi~-g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg-------~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
.++.|++||.+ |+.+..+. ....+.+++++ | + ..+++. ..+..|++|+..+++.+..+..
T Consensus 216 ---~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--p-g---~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~ 286 (329)
T 3fvz_A 216 ---ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI--P-G---FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP 286 (329)
T ss_dssp ---TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE--T-T---EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC
T ss_pred ---CCCEEEEEECCCCcEEEEEeccccCCCcceeeec--C-C---EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC
Confidence 78899999998 99988874 34678899999 6 4 344433 3345899999999999988842
Q ss_pred --CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 510 --NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 510 --~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
++...+.+++++++|.++++...+++|++|++....
T Consensus 287 ~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 287 VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 456779999999999888888899999999987643
No 155
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.67 E-value=2.6e-16 Score=175.96 Aligned_cols=201 Identities=11% Similarity=0.107 Sum_probs=153.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCc---cEEEEEEccCCCEEEEEcCC------
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSA---CVTDLYLCAGFSVAVSSSED------ 396 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~sgs~D------ 396 (556)
.+.+++|+|||+++++ +.||+|++||..++ +....+.+|.. .|.+++|||||+.|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g---------~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN---------TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC---------CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC---------cEEEEeccccccccccceEEECCCCCEEEEEecCccceee
Confidence 3567899999997776 78999999999876 44455666654 49999999999999998764
Q ss_pred ---CcEEEEeCCCCeEEEEeCC--CCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeec-CC----
Q psy10778 397 ---GTCLLWDINTIGYIREIPC--VDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLAS-EL---- 465 (556)
Q Consensus 397 ---g~I~iwdl~~~~~v~~l~~--~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~-~~---- 465 (556)
+.+.+||+.+++. +.+.. .+ ...+..++|||||+.|+.++ ++.|++||+. ++....... ..
T Consensus 88 ~~~~~i~~~d~~~~~~-~~l~~~~~~-~~~~~~~~~SPdG~~la~~~------~~~i~~~~~~~g~~~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDP-QSLDPPEVS-NAKLQYAGWGPKGQQLIFIF------ENNIYYCAHVGKQAIRVVSTGKEGVIY 159 (723)
T ss_dssp CCCSEEEEEESSSCCC-EECCCTTCC-SCCCSBCCBCSSTTCEEEEE------TTEEEEESSSSSCCEEEECCCBTTTEE
T ss_pred cceeeEEEEECCCCce-EeccCCccc-cccccccEECCCCCEEEEEE------CCeEEEEECCCCceEEEecCCCCCceE
Confidence 7888999998875 44443 02 33488999999999999997 4799999997 444433322 22
Q ss_pred --------------CeEEEEEeeCCCCCcceEEEEEeCCC----------------------------------eEEEEe
Q psy10778 466 --------------RITSVTFSNAPEGVSQNVIVTGHSDG----------------------------------TIQLWS 497 (556)
Q Consensus 466 --------------~i~~i~~s~~pdg~~~~~l~tg~~dg----------------------------------~I~iwd 497 (556)
.+.+++|| ||| +.|++++.++ .|++||
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~S--pDg---~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWS--PDG---TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEEC--TTS---SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CcccceeEEEEeccCcceEEEC--CCC---CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 23789999 999 7888877543 799999
Q ss_pred CCCCeEEEEecCC-----CCCCeEEEEEecCCCEEEEEcC----CCcEEEEEcCCCCCcCe
Q psy10778 498 GYKLAHLLTLNTN-----VALPVIAVTYSCDSQHLYASNT----EGLVIIWESSSHNRTPK 549 (556)
Q Consensus 498 ~~~~~~~~~~~~~-----h~~~V~~l~~s~dg~~l~sgs~----Dg~V~vwdl~~~~~~~~ 549 (556)
+.+++....+... +...+.+++|||||++|++.+. ++.|++||+.+++....
T Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 235 LNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp SSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred CCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 9888765666521 2567899999999998877643 35799999988765443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=1.3e-15 Score=177.85 Aligned_cols=220 Identities=11% Similarity=-0.022 Sum_probs=175.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcC----------CCCCceEEEEEc-CCCCEEEEEeCCCcEEEEEeeeccCccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRP----------PLGATIATATTA-PDCHTLWLGLTSGNILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~----------~h~~~V~~i~~s-~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~ 363 (556)
.++++ .++.|++|+....+.. .+.. .|...+.+++|+ |||+.|++++ ++.|.+|+...+
T Consensus 258 ~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~------- 327 (1045)
T 1k32_A 258 RILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT------- 327 (1045)
T ss_dssp CEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS-------
T ss_pred EEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC-------
Confidence 56665 5899999998544332 2221 033478999999 9999999988 789999987654
Q ss_pred ccCCCeEeeCCCc-cEEEEEEccCCCEEEEEcCCCcEE-EEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecC
Q psy10778 364 FCKPPTILLGHSA-CVTDLYLCAGFSVAVSSSEDGTCL-LWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTT 441 (556)
Q Consensus 364 ~~~~~~~l~~h~~-~V~~l~~s~~~~~l~sgs~Dg~I~-iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~ 441 (556)
....+..|.. .+.+++|+ +|+.+++++.++.+. +||+..++.. .+.. | ...+..++|+|+|+.|++++
T Consensus 328 ---~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~-~-~~~~~~~~~SpDG~~la~~~--- 397 (1045)
T 1k32_A 328 ---YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEE-N-LGNVFAMGVDRNGKFAVVAN--- 397 (1045)
T ss_dssp ---BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCC-C-CCSEEEEEECTTSSEEEEEE---
T ss_pred ---ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecC-C-ccceeeeEECCCCCEEEEEC---
Confidence 1234566777 89999999 999999998888888 9999876644 4446 7 78999999999999999998
Q ss_pred cCCCCeEEEEEeC-CcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCC----------eEEEEeCCCCeEEEEecC
Q psy10778 442 KTGGSILRLHTIN-AQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDG----------TIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 442 ~~~d~~I~iwdi~-g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg----------~I~iwd~~~~~~~~~~~~ 509 (556)
.++.|++||+. ++..... .+...+.+++|+ |+| ++|++++.++ .|++||+.+++ +..+.
T Consensus 398 --~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S--pDG---~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~- 468 (1045)
T 1k32_A 398 --DRFEIMTVDLETGKPTVIERSREAMITDFTIS--DNS---RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAAT- 468 (1045)
T ss_dssp --TTSEEEEEETTTCCEEEEEECSSSCCCCEEEC--TTS---CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECS-
T ss_pred --CCCeEEEEECCCCceEEeccCCCCCccceEEC--CCC---CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEee-
Confidence 88999999997 6666555 567788999999 999 8888877644 89999998887 56665
Q ss_pred CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 510 NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 510 ~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
.|...+.+++|+|||+.|+.++.++...+|+...
T Consensus 469 ~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 469 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 6778899999999999999999988888887543
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.66 E-value=4.6e-15 Score=152.20 Aligned_cols=233 Identities=10% Similarity=-0.001 Sum_probs=158.4
Q ss_pred eEEeccCCCeEEEEeCC-CCCCcceEcCCCCCceEEEEEcCCCCE--EEEEe-------------CCCcEEEEEeeeccC
Q psy10778 295 MICWNECDNLIRLKMSK-ELPATPVIRPPLGATIATATTAPDCHT--LWLGL-------------TSGNILVYEYELNAS 358 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~-~~~~~~~~~~~h~~~V~~i~~s~dg~~--l~tgs-------------~Dg~I~vwd~~~~~~ 358 (556)
++.+++.+ .|.+|++. +++..........+.+.+++++|+|++ ++++. .+|++.+|++....
T Consensus 53 ~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g- 130 (365)
T 1jof_A 53 NIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG- 130 (365)
T ss_dssp EEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC-
T ss_pred EEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCC-
Confidence 45555556 99999987 665443322111123566899999994 45553 68999999997421
Q ss_pred cccccccCCCeEee-CCCccEEEEEEccCCCEEEEEc-CCCcEEEEeCC-CCeEE--EEeCCC-CCCCCeeEEEEeCCCC
Q psy10778 359 TNKIEFCKPPTILL-GHSACVTDLYLCAGFSVAVSSS-EDGTCLLWDIN-TIGYI--REIPCV-DPNTPVSHVTMSETNG 432 (556)
Q Consensus 359 ~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~-~~~~v--~~l~~~-h~~~~V~~l~~sp~~~ 432 (556)
... ..+..+. .+...+.+++|+|+|+++++++ .++.|.+||+. +++.. ..+..+ + ...+..++|+|+|+
T Consensus 131 --~~~--~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~-g~~p~~~~~spdg~ 205 (365)
T 1jof_A 131 --KLE--KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP-GDHPRWVAMHPTGN 205 (365)
T ss_dssp --CEE--EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST-TCCEEEEEECTTSS
T ss_pred --cCc--ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC-CCCCCEeEECCCCC
Confidence 110 0011111 3567799999999999877765 46899999998 67643 334310 3 46689999999999
Q ss_pred eEEEEeecCcCCCCeEEEEEeC---CcEE---EEee---cC----C-------CeEEEE-EeeCCCCCcceEEEEEeCC-
Q psy10778 433 EIASVLQTTKTGGSILRLHTIN---AQLI---TSLA---SE----L-------RITSVT-FSNAPEGVSQNVIVTGHSD- 490 (556)
Q Consensus 433 ~i~s~s~~~~~~d~~I~iwdi~---g~~i---~~~~---~~----~-------~i~~i~-~s~~pdg~~~~~l~tg~~d- 490 (556)
++++++. .++.|.+|+++ |++. ..+. .. . .+..++ |+ |+| ++|++++.+
T Consensus 206 ~l~v~~~----~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s--pdG---~~l~v~~~~~ 276 (365)
T 1jof_A 206 YLYALME----AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALT--FSG---KYMFASSRAN 276 (365)
T ss_dssp EEEEEET----TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC--TTS---SEEEEEEEES
T ss_pred EEEEEEC----CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEEC--CCC---CEEEEECCCC
Confidence 9988762 46899999875 5543 2222 11 1 488999 99 999 777766543
Q ss_pred C-----eEEEEeCC-CCeEEE---EecCCCCCCeEEEEEec---CCCEEEEEcCC-CcEEEEEcCCC
Q psy10778 491 G-----TIQLWSGY-KLAHLL---TLNTNVALPVIAVTYSC---DSQHLYASNTE-GLVIIWESSSH 544 (556)
Q Consensus 491 g-----~I~iwd~~-~~~~~~---~~~~~h~~~V~~l~~s~---dg~~l~sgs~D-g~V~vwdl~~~ 544 (556)
+ .|.+|++. +++... .+. .+...+..++|+| ||++|++++.+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~-~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSP-TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEE-CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeee-cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 89999985 566543 232 3445567889999 89999998875 89999999765
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=6.4e-14 Score=138.02 Aligned_cols=225 Identities=8% Similarity=0.056 Sum_probs=165.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcC-----CCCCceEEEEE-cCCCCEEEEEeC-CCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRP-----PLGATIATATT-APDCHTLWLGLT-SGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~-----~h~~~V~~i~~-s~dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+++.+..++.|++|+.. ++....+.. ++...+.++++ .++++++++... ++.|.+|+.. + +.
T Consensus 43 l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g---------~~ 111 (286)
T 1q7f_A 43 IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-G---------QF 111 (286)
T ss_dssp EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-S---------CE
T ss_pred EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-C---------cE
Confidence 55566678889999876 433333321 24457889999 467766666543 7899999833 2 12
Q ss_pred CeEee-CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCC-CCCCCCeeEEEEeCCCCeEEEEeecCcCCC
Q psy10778 368 PTILL-GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPC-VDPNTPVSHVTMSETNGEIASVLQTTKTGG 445 (556)
Q Consensus 368 ~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~-~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d 445 (556)
+..+. .+...+.+++++++++++++...++.|.+||.. ++.+..+.. .+ ...+..+++++++..+++.. .+
T Consensus 112 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-----~~ 184 (286)
T 1q7f_A 112 VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH-LEFPNGVVVNDKQEIFISDN-----RA 184 (286)
T ss_dssp EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTT-CSSEEEEEECSSSEEEEEEG-----GG
T ss_pred EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc-cCCcEEEEECCCCCEEEEEC-----CC
Confidence 23332 344678999999999988888889999999965 666666642 03 45689999999988666665 67
Q ss_pred CeEEEEEeCCcEEEEeecC---CCeEEEEEeeCCCCCcceEEEEEeCCC-eEEEEeCCCCeEEEEecCC-CCCCeEEEEE
Q psy10778 446 SILRLHTINAQLITSLASE---LRITSVTFSNAPEGVSQNVIVTGHSDG-TIQLWSGYKLAHLLTLNTN-VALPVIAVTY 520 (556)
Q Consensus 446 ~~I~iwdi~g~~i~~~~~~---~~i~~i~~s~~pdg~~~~~l~tg~~dg-~I~iwd~~~~~~~~~~~~~-h~~~V~~l~~ 520 (556)
+.|++||.+++.+..+... ..+.+++++ ++| +++++...++ .|.+||. +++.+..+... ....+.++++
T Consensus 185 ~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d--~~G---~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 185 HCVKVFNYEGQYLRQIGGEGITNYPIGVGIN--SNG---EILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp TEEEEEETTCCEEEEESCTTTSCSEEEEEEC--TTC---CEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEE
T ss_pred CEEEEEcCCCCEEEEEccCCccCCCcEEEEC--CCC---CEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEE
Confidence 8999999998888777543 578999999 888 7888888776 9999995 67777777531 2234789999
Q ss_pred ecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 521 SCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 521 s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
+++|+++++ +.|++|++|++...
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCcEEEE-CCCCeEEEEEcccc
Confidence 999987776 57999999998654
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.65 E-value=9.6e-14 Score=141.61 Aligned_cols=227 Identities=9% Similarity=0.084 Sum_probs=153.1
Q ss_pred eEEeccC----CCeEEEEeCCC--CCCcceEcC-CCCCceEEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccC
Q psy10778 295 MICWNEC----DNLIRLKMSKE--LPATPVIRP-PLGATIATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 295 ~l~~gs~----Dg~I~lw~~~~--~~~~~~~~~-~h~~~V~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
+|.+++. ++.|.+|++.. ++....... .+......+++ ++++|++++ .++.|.+|++....... .
T Consensus 63 ~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~-----~ 135 (361)
T 3scy_A 63 FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALL-----P 135 (361)
T ss_dssp EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC-----S
T ss_pred EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc-----c
Confidence 4444444 38999998765 333222221 24456777887 788777776 67899999997542111 1
Q ss_pred CCeEe----------eCCCccEEEEEEccCCCEEE-EEcCCCcEEEEeCCCCe-------E-------EEEeCCCCCCCC
Q psy10778 367 PPTIL----------LGHSACVTDLYLCAGFSVAV-SSSEDGTCLLWDINTIG-------Y-------IREIPCVDPNTP 421 (556)
Q Consensus 367 ~~~~l----------~~h~~~V~~l~~s~~~~~l~-sgs~Dg~I~iwdl~~~~-------~-------v~~l~~~h~~~~ 421 (556)
..... ..+...+.+++|+|+|+.++ ++..++.|.+|++.... . ..... + ...
T Consensus 136 ~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~--~-~~~ 212 (361)
T 3scy_A 136 ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA--P-GSG 212 (361)
T ss_dssp CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC--T-TCC
T ss_pred cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC--C-CCC
Confidence 11111 11233468899999999554 45568999999887533 1 12222 3 567
Q ss_pred eeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcE--EEEee----cCCCeEEEEEeeCCCCCcceEEEEEeC--CCe
Q psy10778 422 VSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQL--ITSLA----SELRITSVTFSNAPEGVSQNVIVTGHS--DGT 492 (556)
Q Consensus 422 V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~--i~~~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~--dg~ 492 (556)
+..++|+|+++++++++. .++.|.+|+++ +++ +.... +.....+++|+ |+| ++|+++.. ++.
T Consensus 213 ~~~~~~spdg~~l~v~~~----~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s--pdg---~~l~v~~~~~~~~ 283 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINE----IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS--PDG---KYLYASNRLKADG 283 (361)
T ss_dssp EEEEEECTTSSEEEEEET----TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC--TTS---SEEEEEECSSSCE
T ss_pred CeEEEEcCCCCEEEEEcC----CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC--CCC---CEEEEECCCCCCE
Confidence 899999999998877763 57899999997 433 22222 12456899999 999 77766655 489
Q ss_pred EEEEeCC--CCe--EEEEecCCCCCCeEEEEEecCCCEEEEEc-CCCcEEEEEcC
Q psy10778 493 IQLWSGY--KLA--HLLTLNTNVALPVIAVTYSCDSQHLYASN-TEGLVIIWESS 542 (556)
Q Consensus 493 I~iwd~~--~~~--~~~~~~~~h~~~V~~l~~s~dg~~l~sgs-~Dg~V~vwdl~ 542 (556)
|.+|++. +++ .+..+. . ...+.+++|+|||++|++++ .++.|.+|++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999985 344 455555 3 46788999999999888877 67899997665
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=5.5e-16 Score=173.49 Aligned_cols=232 Identities=10% Similarity=-0.001 Sum_probs=158.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCC---ceEEEEEcCCCCEEEEEeC---------CCcEEEEEeeeccCcccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGA---TIATATTAPDCHTLWLGLT---------SGNILVYEYELNASTNKI 362 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~---~V~~i~~s~dg~~l~tgs~---------Dg~I~vwd~~~~~~~~~~ 362 (556)
+++. +.|+.|++|+..+++....+. .|.. .+.+++|+|||++|++++. +++|++||+.++..
T Consensus 29 ~~~~-~~d~~i~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---- 102 (719)
T 1z68_A 29 YLHQ-SADNNIVLYNIETGQSYTILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---- 102 (719)
T ss_dssp EEEE-CTTSCEEEEESSSCCEEEEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE----
T ss_pred EEEE-cCCCCEEEEEcCCCcEEEEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc----
Confidence 4444 469999999999887665553 2322 3889999999999999876 78999999876511
Q ss_pred cccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCe-----------------eEE
Q psy10778 363 EFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPV-----------------SHV 425 (556)
Q Consensus 363 ~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V-----------------~~l 425 (556)
. ....+ ...+..++|||||+.|++++ ++.|++||+.+++..+.....+ ...+ .++
T Consensus 103 ~---~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~-~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 103 V---RGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGR-ENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp C---CSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCB-TTTEEESSCCHHHHHHTTCSSCCE
T ss_pred c---cceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCC-cCCeEcccccceeeeecccCcccE
Confidence 0 00111 24688899999999999886 7899999999887654332202 2212 489
Q ss_pred EEeCCCCeEEEEeecCcC-----------------------------CCCeEEEEEeCCcEE---EEe-------ecCCC
Q psy10778 426 TMSETNGEIASVLQTTKT-----------------------------GGSILRLHTINAQLI---TSL-------ASELR 466 (556)
Q Consensus 426 ~~sp~~~~i~s~s~~~~~-----------------------------~d~~I~iwdi~g~~i---~~~-------~~~~~ 466 (556)
+|||||+.|++++.+... ....|++||+.+... ..+ .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 999999999998743100 112788999974321 111 24567
Q ss_pred eEEEEEeeCCCCCcceEEEEEeCC----CeEEEEe----CCCCeEEEEec---CCCCCCeE-----EEEEecCCCEEEE-
Q psy10778 467 ITSVTFSNAPEGVSQNVIVTGHSD----GTIQLWS----GYKLAHLLTLN---TNVALPVI-----AVTYSCDSQHLYA- 529 (556)
Q Consensus 467 i~~i~~s~~pdg~~~~~l~tg~~d----g~I~iwd----~~~~~~~~~~~---~~h~~~V~-----~l~~s~dg~~l~s- 529 (556)
+.+++|+ ||+ +++++.... ..|.+|| ..+++....+. .+|...+. .++|+|||+.++.
T Consensus 255 ~~~~~~S--pD~---~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 255 FSWLTWV--TDE---RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEEEEES--SSS---EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred EEEeEEe--CCC---eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 8999999 888 777775432 3488899 77776554441 24566666 7899999985543
Q ss_pred -EcCCC--cEEEEEcCCCC
Q psy10778 530 -SNTEG--LVIIWESSSHN 545 (556)
Q Consensus 530 -gs~Dg--~V~vwdl~~~~ 545 (556)
+..+| .|.+|++.+++
T Consensus 330 ~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EECTTSCEEEEEESSCSTT
T ss_pred EEccCCceEEEEEECCCCc
Confidence 55566 46666766544
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=3.7e-15 Score=162.61 Aligned_cols=196 Identities=11% Similarity=-0.011 Sum_probs=145.6
Q ss_pred CCceEEEEEcCCCCEEEEEeC-CCcEEEEEeeeccCcccccccCCCeEeeCCC-ccEEEEEEccCCCEEEEEcC---CCc
Q psy10778 324 GATIATATTAPDCHTLWLGLT-SGNILVYEYELNASTNKIEFCKPPTILLGHS-ACVTDLYLCAGFSVAVSSSE---DGT 398 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~sgs~---Dg~ 398 (556)
..+|.+++++|||+.||+++. ||+++||++..+ ....+..|. ..+..++|+|+ +++++++. +..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g----------~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~ 89 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG----------ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQ 89 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT----------EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCC
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCC----------CcEeeecccccccccccCCCC-eEEEEeccCCCCcc
Confidence 457999999999999999887 999999998543 123445555 68999999999 77777765 455
Q ss_pred EEEEeCCC---CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEee
Q psy10778 399 CLLWDINT---IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSN 474 (556)
Q Consensus 399 I~iwdl~~---~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~ 474 (556)
..+|.+.. +... .+.. ...+...+|+|+++.++..+. .++.+.+||+. ++......+.. .+++|+
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~---~~~~~~~~~s~dg~~~~~~s~----~~~~~~l~d~~~g~~~~l~~~~~--~~~~~s- 158 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEA---VKPMRILSGVDTGEAVVFTGA----TEDRVALYALDGGGLRELARLPG--FGFVSD- 158 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTT---SCSBEEEEEEECSSCEEEEEE----CSSCEEEEEEETTEEEEEEEESS--CEEEEE-
T ss_pred eEEEEEeccCCCccc-cccC---CCCceeeeeCCCCCeEEEEec----CCCCceEEEccCCcEEEeecCCC--ceEEEC-
Confidence 56655432 3322 5544 344667899999876544432 45556699998 44433333433 889999
Q ss_pred CCCCCcceEEEEEeCC----CeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCC--cEEEEEcCCCCCc
Q psy10778 475 APEGVSQNVIVTGHSD----GTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEG--LVIIWESSSHNRT 547 (556)
Q Consensus 475 ~pdg~~~~~l~tg~~d----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg--~V~vwdl~~~~~~ 547 (556)
||| +.|++++.+ +.|++||+.+++.. .+. .|...+.+++|||||+.|++++.+| .|++||+.+++..
T Consensus 159 -pDG---~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 159 -IRG---DLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp -EET---TEEEEEEEEETTEEEEEEEETTTCCCE-EEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred -CCC---CEEEEEEEcCCCCeEEEEEcCCCCCce-Eee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 899 889987766 78999999887765 454 5778899999999999999888888 8999999886654
No 162
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.64 E-value=6.5e-14 Score=140.31 Aligned_cols=189 Identities=12% Similarity=0.033 Sum_probs=148.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCC----CceEEEEEcCCCCEEEEEe------------CCCcEEEEEeeeccC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLG----ATIATATTAPDCHTLWLGL------------TSGNILVYEYELNAS 358 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~----~~V~~i~~s~dg~~l~tgs------------~Dg~I~vwd~~~~~~ 358 (556)
+++.+..++.|.+||..+++....+...+. ..+.+++|+|+|+++++++ .++.|.+||+.++
T Consensus 48 l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-- 125 (337)
T 1pby_B 48 AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL-- 125 (337)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT--
T ss_pred EEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC--
Confidence 667777889999999998887766654331 2577899999999999886 5799999998754
Q ss_pred cccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-------------------
Q psy10778 359 TNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPN------------------- 419 (556)
Q Consensus 359 ~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~------------------- 419 (556)
+....+.. ...+.+++|+|+++.++++ ++.|.+||+.+++.+..+.. + .
T Consensus 126 -------~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~ 193 (337)
T 1pby_B 126 -------SRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPI-Q-SWEAETYAQPDVLAVWNQHE 193 (337)
T ss_dssp -------EEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECS-T-TTTTTTBCCCBCCCCCCCCT
T ss_pred -------cEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeec-c-ccCCCceeCCCccEEeeecc
Confidence 22233433 4457889999999988877 68899999998877766543 2 1
Q ss_pred -----------------------------------------------CCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 420 -----------------------------------------------TPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 420 -----------------------------------------------~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
..+..++|+|+++.++++ ++.|++||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-------~~~v~~~d 266 (337)
T 1pby_B 194 SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-------YNVLESFD 266 (337)
T ss_dssp TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-------ESEEEEEE
T ss_pred CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-------CCeEEEEE
Confidence 123458999999888876 37999999
Q ss_pred eC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC
Q psy10778 453 IN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 453 i~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
++ ++.+..+.....+.+++|+ |+| ++|++++.++.|++||+.+++.+..+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 267 LEKNASIKRVPLPHSYYSVNVS--TDG---STVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TTTTEEEEEEECSSCCCEEEEC--TTS---CEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCCcCcceecCCCceeeEEEC--CCC---CEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 97 7777777777788999999 899 7888888899999999999999888873
No 163
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=9.1e-14 Score=137.07 Aligned_cols=212 Identities=10% Similarity=-0.018 Sum_probs=168.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+++.++.|+.|.+||.++++.+..+.......+.+++++|+|++++ +.++.|..||. ++ +.+..+..+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G---------~~~W~~~~~ 74 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG---------RELWNIAAP 74 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS---------CEEEEEECC
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC---------CEEEEEcCC
Confidence 8899999999999999999888777643224688999999999888 34678888887 44 334555544
Q ss_pred -CccEEEEEEccCCCEEEEEcC-CCcEEEEeCCCCeEEEEeCCC-----CCCCCeeEEEEeCCCCeEEEEeecCcCCCCe
Q psy10778 375 -SACVTDLYLCAGFSVAVSSSE-DGTCLLWDINTIGYIREIPCV-----DPNTPVSHVTMSETNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 375 -~~~V~~l~~s~~~~~l~sgs~-Dg~I~iwdl~~~~~v~~l~~~-----h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~ 447 (556)
...+.++.+.++|+++++.+. ++.+..+|. +|+.+.++... + ......++..++|+++++.. .++.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~-~~~~~~v~~~~~G~~lv~~~-----~~~~ 147 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERP-HAQFRQINKNKKGNYLVPLF-----ATSE 147 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSG-GGSCSCCEECTTSCEEEEET-----TTTE
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcc-cccccCceECCCCCEEEEec-----CCCE
Confidence 357889999999999999887 788888886 68877766420 1 12455678899999999887 7899
Q ss_pred EEEEEeCCcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-----CCCCeEEEEEec
Q psy10778 448 LRLHTINAQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-----VALPVIAVTYSC 522 (556)
Q Consensus 448 I~iwdi~g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-----h~~~V~~l~~s~ 522 (556)
|..||.+|+.+..+.......++... ++| ++++++..++.|..+|..+++.+.++... ....+.+++..+
T Consensus 148 v~~~d~~G~~~w~~~~~~~~~~~~~~--~~g---~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 148 VREIAPNGQLLNSVKLSGTPFSSAFL--DNG---DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp EEEECTTSCEEEEEECSSCCCEEEEC--TTS---CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred EEEECCCCCEEEEEECCCCccceeEc--CCC---CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 99999999999999876677777777 888 89999998899999999999999998621 112378889999
Q ss_pred CCCEEEEE
Q psy10778 523 DSQHLYAS 530 (556)
Q Consensus 523 dg~~l~sg 530 (556)
+|..+++.
T Consensus 223 ~G~i~v~~ 230 (276)
T 3no2_A 223 NGGLYICN 230 (276)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEe
Confidence 99988877
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.60 E-value=1.9e-13 Score=137.74 Aligned_cols=191 Identities=14% Similarity=0.077 Sum_probs=145.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCC-----CCceEEEEEcCCCCEEEEEeCC------------CcEEEEEeeecc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPL-----GATIATATTAPDCHTLWLGLTS------------GNILVYEYELNA 357 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h-----~~~V~~i~~s~dg~~l~tgs~D------------g~I~vwd~~~~~ 357 (556)
+++.+..++.|.+|+..+++....+...+ ...+.+++|+|+|+++++++.+ +.|.+||+.++.
T Consensus 57 ~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 57 AYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 55667789999999999887666665433 2337889999999999999866 899999987641
Q ss_pred CcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC------------------
Q psy10778 358 STNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPN------------------ 419 (556)
Q Consensus 358 ~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~------------------ 419 (556)
.. +.+..... ...+.+++|+|+++ +++++. .|.+||+.+++.+..+.. + .
T Consensus 137 ----~~--~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 137 ----EA--KPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPL-R-NWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp ----GB--CCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECS-T-TCCCTTBCCCBCCCCCCCC
T ss_pred ----cc--ceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccc-c-ccCCccccCccceeeecCC
Confidence 11 23344443 34688999999999 555544 499999999888777654 2 1
Q ss_pred --------------------------------------------------CCeeEEEEeC-CCCeEEEEeecCcCCCCeE
Q psy10778 420 --------------------------------------------------TPVSHVTMSE-TNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 420 --------------------------------------------------~~V~~l~~sp-~~~~i~s~s~~~~~~d~~I 448 (556)
..+..++++| +++.++++ ++.|
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-------~~~v 277 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-------LNRL 277 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-------ESEE
T ss_pred CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-------cCeE
Confidence 1244567778 88888776 3689
Q ss_pred EEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC
Q psy10778 449 RLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 449 ~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
.+||+. ++.+..+.....+.+++|+ ++| +.|++++.++.|++||+.+++.+..+..
T Consensus 278 ~~~d~~~~~~~~~~~~~~~~~~~~~s--~dg---~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDHTYYCVAFD--KKG---DKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEEC--SSS---SCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEEECccCeEEEEEcCCCCccceEEC--CCC---CEEEEecCCCeEEEEeccccceeeeeec
Confidence 999997 7777777777778899999 888 7777788899999999999999888863
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=1.8e-13 Score=140.30 Aligned_cols=221 Identities=11% Similarity=0.022 Sum_probs=148.9
Q ss_pred CeEEEEeC--CCCCCcceEc--CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEee-eccCcccccccCCCeEeeCCCcc
Q psy10778 303 NLIRLKMS--KELPATPVIR--PPLGATIATATTAPDCHTLWLGLTSGNILVYEYE-LNASTNKIEFCKPPTILLGHSAC 377 (556)
Q Consensus 303 g~I~lw~~--~~~~~~~~~~--~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~-~~~~~~~~~~~~~~~~l~~h~~~ 377 (556)
+.|.++++ +++++..... ......+..++++|+|++|++++.+ .|.+|++. .+ +.. .......+ +.
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g----~~~---~~~~~~~~-g~ 84 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT----EIV---HEASHPIG-GH 84 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT----EEE---EEEEEECC-SS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC----CEE---EeeEeecC-CC
Confidence 46776654 3443322211 1334467899999999999999887 99999987 33 111 01111111 23
Q ss_pred EEEEEEccCCCE--EEEEc-------------CCCcEEEEeCC-CCeEEEEeC----CCCCCCCeeEEEEeCCCCeEEEE
Q psy10778 378 VTDLYLCAGFSV--AVSSS-------------EDGTCLLWDIN-TIGYIREIP----CVDPNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 378 V~~l~~s~~~~~--l~sgs-------------~Dg~I~iwdl~-~~~~v~~l~----~~h~~~~V~~l~~sp~~~~i~s~ 437 (556)
..+++|+|+|+. +++++ .+|++.+|++. +++....+. . + ...+.+++|+|+|++++++
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~-~-~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQ-E-NTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECC-T-TCCEEEEEECTTSSEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeC-C-CCcceEEEECCCCCEEEEE
Confidence 456899999994 55553 68999999997 465544332 2 2 5679999999999988876
Q ss_pred eecCcCCCCeEEEEEeC--CcEE--EEee---cCCCeEEEEEeeCCCCCcceEEEEEeC-CCeEEEEeCC--CCeEE---
Q psy10778 438 LQTTKTGGSILRLHTIN--AQLI--TSLA---SELRITSVTFSNAPEGVSQNVIVTGHS-DGTIQLWSGY--KLAHL--- 504 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~--g~~i--~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~-dg~I~iwd~~--~~~~~--- 504 (556)
.. .++.|++|+++ |+.. ..+. +...+..++|+ |+| +++++++. ++.|.+|++. +++..
T Consensus 163 ~~----~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~s--pdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 163 DL----TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMH--PTG---NYLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp ET----TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEEC--TTS---SEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cC----CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEEC--CCC---CEEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 52 46799999996 5543 3333 25678999999 999 77777664 7899999764 55542
Q ss_pred EEecC--C----CCC------CeEEEE-EecCCCEEEEEcCCC------cEEEEEcCC
Q psy10778 505 LTLNT--N----VAL------PVIAVT-YSCDSQHLYASNTEG------LVIIWESSS 543 (556)
Q Consensus 505 ~~~~~--~----h~~------~V~~l~-~s~dg~~l~sgs~Dg------~V~vwdl~~ 543 (556)
..+.. . +.. .+.+++ |+|||++|++++.++ .|.+|++..
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC
Confidence 22221 1 121 488999 999999988776533 899999963
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=2.4e-14 Score=161.00 Aligned_cols=232 Identities=8% Similarity=-0.011 Sum_probs=159.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCC-----ceEEEEEcCCCCEEEEEeCC---------CcEEEEEeeeccCcc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGA-----TIATATTAPDCHTLWLGLTS---------GNILVYEYELNASTN 360 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~-----~V~~i~~s~dg~~l~tgs~D---------g~I~vwd~~~~~~~~ 360 (556)
+++.+ ||.|++|+..+++....+. .|.. ....++|||||++|+.++.+ +.+.+||+.++
T Consensus 30 ~~~~~--~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~---- 102 (740)
T 4a5s_A 30 YLYKQ--ENNILVFNAEYGNSSVFLE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR---- 102 (740)
T ss_dssp EEEEE--TTEEEEEETTTCCEEEEEC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT----
T ss_pred EEEEc--CCcEEEEECCCCceEEEEe-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC----
Confidence 66665 9999999999988766654 4432 22448899999999999876 56679998875
Q ss_pred cccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCe-----------------e
Q psy10778 361 KIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPV-----------------S 423 (556)
Q Consensus 361 ~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V-----------------~ 423 (556)
+ ...+..|...+...+|||||+.|+.++ |+.|.+||+.+++..+.....+ ...+ .
T Consensus 103 -----~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~-~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 103 -----Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGK-EDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp -----E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCB-TTTEEESBCCHHHHHHTSSSSB
T ss_pred -----c-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCC-ccceecCcccccccchhcCCCc
Confidence 1 123566778899999999999998885 6899999999887554322102 1222 3
Q ss_pred EEEEeCCCCeEEEEeecCc-------------------------------CCCCeEEEEEeCC---c---EEEEee----
Q psy10778 424 HVTMSETNGEIASVLQTTK-------------------------------TGGSILRLHTINA---Q---LITSLA---- 462 (556)
Q Consensus 424 ~l~~sp~~~~i~s~s~~~~-------------------------------~~d~~I~iwdi~g---~---~i~~~~---- 462 (556)
.++|||||+.||.++.+.. .....|++||+.+ . ....+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 5899999999998864221 0112688899876 3 333332
Q ss_pred ---cCCCeEEEEEeeCCCCCcceEEEEEeC----CCeEEEEeCCCCe----EE--EEe-cCCCCCCeE-----EEEEecC
Q psy10778 463 ---SELRITSVTFSNAPEGVSQNVIVTGHS----DGTIQLWSGYKLA----HL--LTL-NTNVALPVI-----AVTYSCD 523 (556)
Q Consensus 463 ---~~~~i~~i~~s~~pdg~~~~~l~tg~~----dg~I~iwd~~~~~----~~--~~~-~~~h~~~V~-----~l~~s~d 523 (556)
+...+..++|+ |+| ++++.... +..|++||+.+++ +. ..+ ..++...|. ..+|+||
T Consensus 255 ~~~~~~~~~~~~ws--pdg---~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 255 MLIGDHYLCDVTWA--TQE---RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp HHTSCEEEEEEEEE--ETT---EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCCCCeEEEEEEEe--CCC---eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 45678999999 888 76665432 3479999998876 21 111 113444443 7889999
Q ss_pred CCEEE-EEc-CCC--cEEEEEcCCCCC
Q psy10778 524 SQHLY-ASN-TEG--LVIIWESSSHNR 546 (556)
Q Consensus 524 g~~l~-sgs-~Dg--~V~vwdl~~~~~ 546 (556)
|+.++ ..+ .+| .|++|++.++..
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCce
Confidence 99876 554 344 688888876543
No 167
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.57 E-value=2.9e-15 Score=167.64 Aligned_cols=197 Identities=14% Similarity=0.139 Sum_probs=142.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCc---cEEEEEEccCCCEEEEEcC---------C
Q psy10778 329 TATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSA---CVTDLYLCAGFSVAVSSSE---------D 396 (556)
Q Consensus 329 ~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~sgs~---------D 396 (556)
+++|+|+|++++ .+.|++|++|++.++ +....+.+|.. .+.+++|||||+.|++++. +
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g---------~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETG---------QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSC---------CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCC---------cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 678999996554 456999999999876 33344444433 3899999999999998876 7
Q ss_pred CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee--cCCCe------
Q psy10778 397 GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA--SELRI------ 467 (556)
Q Consensus 397 g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~--~~~~i------ 467 (556)
+.|++||+.+++.+..... ...+..++|||||+.|+.+. ++.|++|++. ++...... +...+
T Consensus 90 ~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp EEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE------TTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred eEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE------CCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 8999999998876321222 34588999999999999985 6799999997 44433221 11112
Q ss_pred -----------EEEEEeeCCCCCcceEEEEEeCCC----------------------------------eEEEEeCCCCe
Q psy10778 468 -----------TSVTFSNAPEGVSQNVIVTGHSDG----------------------------------TIQLWSGYKLA 502 (556)
Q Consensus 468 -----------~~i~~s~~pdg~~~~~l~tg~~dg----------------------------------~I~iwd~~~~~ 502 (556)
.+++|| ||| +.|++++.|. .|++||+.+++
T Consensus 161 ~v~~ee~~~~~~~~~wS--PDG---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~ 235 (719)
T 1z68_A 161 WVYEEEMLATKYALWWS--PNG---KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA 235 (719)
T ss_dssp HHHHHHTTCSSCCEEEC--TTS---SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH
T ss_pred ceeeeecccCcccEEEC--CCC---CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC
Confidence 489999 999 8888877542 78899998876
Q ss_pred EE--EEec-----CCCCCCeEEEEEecCCCEEEEEcCC----CcEEEEE----cCCCCCcCe
Q psy10778 503 HL--LTLN-----TNVALPVIAVTYSCDSQHLYASNTE----GLVIIWE----SSSHNRTPK 549 (556)
Q Consensus 503 ~~--~~~~-----~~h~~~V~~l~~s~dg~~l~sgs~D----g~V~vwd----l~~~~~~~~ 549 (556)
.. ..+. .+|...+.+++||||++++++.... ..|.+|| +.+++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 236 YVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp HHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred ccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 42 1221 0577789999999998877764433 2488999 766554433
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=2.8e-13 Score=138.94 Aligned_cols=227 Identities=7% Similarity=-0.010 Sum_probs=149.1
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe----------CCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL----------TSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
.|+.|.+||..+++....+.. +..+ .++++|||++++++. .+++|.+||..+. +.+..
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~---------~~~~~ 96 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL---------TFEKE 96 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC---------CEEEE
T ss_pred ccCeEEEEECCCCeEEEEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC---------cEEEE
Confidence 578999999998887776653 3333 899999999999986 3678999997654 23344
Q ss_pred eeC------CCccEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEE-eCCCCCCC---------CeeEEEEeCCCC
Q psy10778 371 LLG------HSACVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIRE-IPCVDPNT---------PVSHVTMSETNG 432 (556)
Q Consensus 371 l~~------h~~~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~-l~~~h~~~---------~V~~l~~sp~~~ 432 (556)
+.. +......++++|+|++|+++.. +++|.+||+.+++.+.. +.. . .. .-..+++++++.
T Consensus 97 i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp EEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSS
T ss_pred EEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCc
Confidence 332 2234667999999999988763 68999999999988887 543 1 10 112233333333
Q ss_pred eEEEEeecC---------------------------------cCCCCeEEEEEeCCc---EEEEeec-----------CC
Q psy10778 433 EIASVLQTT---------------------------------KTGGSILRLHTINAQ---LITSLAS-----------EL 465 (556)
Q Consensus 433 ~i~s~s~~~---------------------------------~~~d~~I~iwdi~g~---~i~~~~~-----------~~ 465 (556)
.++...... .+.++.|.++|+.+. .+..+.. ..
T Consensus 175 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 175 LLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 222211000 002334555555311 1111110 01
Q ss_pred CeEEEEEeeCCCCCcceEEEEEeC-----------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 466 RITSVTFSNAPEGVSQNVIVTGHS-----------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 466 ~i~~i~~s~~pdg~~~~~l~tg~~-----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
....++++ +++ +.++++.. .+.|.+||+.+++.+.++. .+. +.+++|+|||++|++++. +
T Consensus 255 g~~~~a~~--~dg---~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~~--p~~ia~spdg~~l~v~n~-~ 325 (361)
T 2oiz_A 255 GYNLVGLH--RAS---GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GRD--ALSMTIDQQRNLMLTLDG-G 325 (361)
T ss_dssp CSSCEEEE--TTT---TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CTT--CCEEEEETTTTEEEEECS-S
T ss_pred CeeEEEEe--cCC---CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cCC--eeEEEECCCCCEEEEeCC-C
Confidence 11126788 776 45554432 3589999999999999998 444 999999999999999887 9
Q ss_pred cEEEEEcCCC--CCcCee
Q psy10778 535 LVIIWESSSH--NRTPKF 550 (556)
Q Consensus 535 ~V~vwdl~~~--~~~~~~ 550 (556)
.|.+||..++ +.+..+
T Consensus 326 ~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 326 NVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp CEEEEECSSSSCEEEEEE
T ss_pred eEEEEECCCCcceeeEEe
Confidence 9999999998 655444
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.54 E-value=2.6e-12 Score=126.45 Aligned_cols=198 Identities=8% Similarity=0.046 Sum_probs=153.7
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe------eCCCccEEEEEE-ccCCCEEEEEc
Q psy10778 322 PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL------LGHSACVTDLYL-CAGFSVAVSSS 394 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l------~~h~~~V~~l~~-s~~~~~l~sgs 394 (556)
++...+.+++++++++++++...++.|.+|+.... ....+ .+|...+.++++ .+++.++++..
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~----------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~ 96 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR----------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER 96 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC----------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc----------EEEEecccCCCcccccCceEEEEEcCCCeEEEEcC
Confidence 45567899999999998888888999999986521 11222 234567899999 46777777764
Q ss_pred C-CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEeec---CCCeEEE
Q psy10778 395 E-DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSLAS---ELRITSV 470 (556)
Q Consensus 395 ~-Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~~~---~~~i~~i 470 (556)
. ++.|.+|| .+++.+..+...+ ...+..+++++++..+++.. .++.|.+||.+++.+..+.. ...+.++
T Consensus 97 ~~~~~i~~~d-~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~-----~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 97 SPTHQIQIYN-QYGQFVRKFGATI-LQHPRGVTVDNKGRIIVVEC-----KVMRVIIFDQNGNVLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp GGGCEEEEEC-TTSCEEEEECTTT-CSCEEEEEECTTSCEEEEET-----TTTEEEEECTTSCEEEEEECTTTCSSEEEE
T ss_pred CCCCEEEEEC-CCCcEEEEecCcc-CCCceEEEEeCCCCEEEEEC-----CCCEEEEEcCCCCEEEEeCCCCccCCcEEE
Confidence 3 89999999 5677777775413 46789999999998777665 67899999998888777742 3568999
Q ss_pred EEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCC-cEEEEEcC
Q psy10778 471 TFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEG-LVIIWESS 542 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg-~V~vwdl~ 542 (556)
+++ ++| +++++...++.|++||. +++.+..+.. ++...+.+++++++|+++++...++ .|.+|+..
T Consensus 170 ~~~--~~g---~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 170 VVN--DKQ---EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEC--SSS---EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEC--CCC---CEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 999 888 88888888999999997 6677777752 2236789999999999888888776 99999964
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.53 E-value=1e-13 Score=142.44 Aligned_cols=233 Identities=11% Similarity=0.034 Sum_probs=153.8
Q ss_pred eEEeccC-CC--eEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 295 MICWNEC-DN--LIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 295 ~l~~gs~-Dg--~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
.|++++. +| .|.+|+..+++...... ++...+..++|+|||+.|+.++.++.|++||+.++ +.....
T Consensus 49 ~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g---------~~~~~~ 118 (388)
T 3pe7_A 49 KLLFGGAFDGPWNYYLLDLNTQVATQLTE-GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATL---------EENVVY 118 (388)
T ss_dssp EEEEEECTTSSCEEEEEETTTCEEEECCC-SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTC---------CEEEEE
T ss_pred EEEEEEcCCCCceEEEEeCCCCceEEeee-CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCC---------cceeee
Confidence 4555554 66 48888988876554443 45555556789999999999999999999998875 223344
Q ss_pred eCCCccEEEEE--EccCCCEEEEE----------------------cCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEE
Q psy10778 372 LGHSACVTDLY--LCAGFSVAVSS----------------------SEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTM 427 (556)
Q Consensus 372 ~~h~~~V~~l~--~s~~~~~l~sg----------------------s~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~ 427 (556)
..+...+.... ++++++.++.. +.++.|.+||+.+++....... ...+..++|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~~~~~~~~ 195 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE---NQWLGHPIY 195 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE---SSCEEEEEE
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC---CccccccEE
Confidence 45555554443 48899887742 2457899999998876554443 577899999
Q ss_pred eC-CCCeEEEEeecCc-CCCCeEEEEEeCCcEEEEee-cC--CCeEEEEEeeCCCCCcceEEEE-EeCCC----eEEEEe
Q psy10778 428 SE-TNGEIASVLQTTK-TGGSILRLHTINAQLITSLA-SE--LRITSVTFSNAPEGVSQNVIVT-GHSDG----TIQLWS 497 (556)
Q Consensus 428 sp-~~~~i~s~s~~~~-~~d~~I~iwdi~g~~i~~~~-~~--~~i~~i~~s~~pdg~~~~~l~t-g~~dg----~I~iwd 497 (556)
+| +++.|+.+..... .....|.++|..+.....+. +. ..+..++|+ |+| +.|+. +..++ .|++||
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s--pdg---~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV--PDG---SALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC--TTS---SCEEEEEEETTCCCEEEEEEC
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC--CCC---CEEEEEecCCCCCcceEEEEe
Confidence 99 9999988773110 01347888888755444443 33 257788999 899 65544 33322 399999
Q ss_pred CCCCeEE--EEecCCCCC---CeEEEEEecCCCEEEEE---------cCCCcEEEEEcCCCCC
Q psy10778 498 GYKLAHL--LTLNTNVAL---PVIAVTYSCDSQHLYAS---------NTEGLVIIWESSSHNR 546 (556)
Q Consensus 498 ~~~~~~~--~~~~~~h~~---~V~~l~~s~dg~~l~sg---------s~Dg~V~vwdl~~~~~ 546 (556)
+.+++.. ..+. ++.. ....++|+|||+.|+.. ..++.|++||+.+++.
T Consensus 271 ~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 271 PETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp TTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred cCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 9888743 3332 2100 01123799999888754 4566899999988554
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.53 E-value=3.8e-13 Score=138.17 Aligned_cols=200 Identities=10% Similarity=0.064 Sum_probs=140.5
Q ss_pred EEEcCCCCEEEEEeC-CCc--EEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10778 330 ATTAPDCHTLWLGLT-SGN--ILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT 406 (556)
Q Consensus 330 i~~s~dg~~l~tgs~-Dg~--I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~ 406 (556)
.+|+|||++|+.++. +|. |.+||+.++ +......++...+..++|+|+++.|+.++.++.+.+||+.+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g---------~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~ 111 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ---------VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT 111 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTC---------EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCC---------ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 789999999999887 775 666666544 22233445655565778999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCCeeEEE--EeCCCCeEEEEeecC-----------------cCCCCeEEEEEeC-CcEEEEeecCCC
Q psy10778 407 IGYIREIPCVDPNTPVSHVT--MSETNGEIASVLQTT-----------------KTGGSILRLHTIN-AQLITSLASELR 466 (556)
Q Consensus 407 ~~~v~~l~~~h~~~~V~~l~--~sp~~~~i~s~s~~~-----------------~~~d~~I~iwdi~-g~~i~~~~~~~~ 466 (556)
++....... + ...+.... +++++..++...... ...+..|.+||+. |+......+...
T Consensus 112 g~~~~~~~~-~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~ 189 (388)
T 3pe7_A 112 LEENVVYQV-P-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW 189 (388)
T ss_dssp CCEEEEEEC-C-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSC
T ss_pred Ccceeeeec-h-hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCcc
Confidence 887766665 4 44444333 489988887542110 1134789999997 655555566778
Q ss_pred eEEEEEeeCC-CCCcceEEEEEeCC------CeEEEEeCCCCeEEEEecCCCC-CCeEEEEEecCCCEEEEEcC-CC---
Q psy10778 467 ITSVTFSNAP-EGVSQNVIVTGHSD------GTIQLWSGYKLAHLLTLNTNVA-LPVIAVTYSCDSQHLYASNT-EG--- 534 (556)
Q Consensus 467 i~~i~~s~~p-dg~~~~~l~tg~~d------g~I~iwd~~~~~~~~~~~~~h~-~~V~~l~~s~dg~~l~sgs~-Dg--- 534 (556)
+..++|+ | +| +.|+....+ ..|.++|...++ ...+..... ..+..++|+|||+.|+..+. ++
T Consensus 190 ~~~~~~s--p~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 263 (388)
T 3pe7_A 190 LGHPIYR--PYDD---STVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPD 263 (388)
T ss_dssp EEEEEEE--TTEE---EEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCC
T ss_pred ccccEEC--CCCC---CEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCc
Confidence 9999999 8 88 777776653 378888875544 344442222 35788999999997755433 22
Q ss_pred -cEEEEEcCCCCC
Q psy10778 535 -LVIIWESSSHNR 546 (556)
Q Consensus 535 -~V~vwdl~~~~~ 546 (556)
.|++||+.+++.
T Consensus 264 ~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 264 RFIYSADPETLEN 276 (388)
T ss_dssp EEEEEECTTTCCE
T ss_pred ceEEEEecCCCce
Confidence 399999988764
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.52 E-value=1.7e-12 Score=131.06 Aligned_cols=207 Identities=12% Similarity=0.048 Sum_probs=155.3
Q ss_pred CCceEEEEEcCCCCEEEEEeCC------------------------CcEEEEEeeeccCcccccccCCCeEee-CCCccE
Q psy10778 324 GATIATATTAPDCHTLWLGLTS------------------------GNILVYEYELNASTNKIEFCKPPTILL-GHSACV 378 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~D------------------------g~I~vwd~~~~~~~~~~~~~~~~~~l~-~h~~~V 378 (556)
.+.+.+++++++|+++++...+ ++|.+||..++ +...... ++....
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~p 93 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---------EILQSSGKNLFYLP 93 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---------CEEEEECTTTCSSE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---------eEEeccCCCccCCc
Confidence 4578999999999999888777 47888887654 2222222 455678
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCCCe-EEEEeC---------CCCCCCCeeEEEEeC-CCCeEEEEeecCcCCCCe
Q psy10778 379 TDLYLCAGFSVAVSSSEDGTCLLWDINTIG-YIREIP---------CVDPNTPVSHVTMSE-TNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 379 ~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~-~v~~l~---------~~h~~~~V~~l~~sp-~~~~i~s~s~~~~~~d~~ 447 (556)
.+++++++|+++++.+.++.|++||..... .+..+. . + -.....++++| ++..+++.+. .++.
T Consensus 94 ~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~-~-~~~P~~ia~~~~~g~lyv~d~~----~~~~ 167 (329)
T 3fvz_A 94 HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQN-H-FCQPTDVAVEPSTGAVFVSDGY----CNSR 167 (329)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTT-C-CSSEEEEEECTTTCCEEEEECS----SCCE
T ss_pred eEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCcc-c-cCCCcEEEEeCCCCeEEEEeCC----CCCe
Confidence 999999999999999999999999986432 555552 2 3 34689999999 6666666531 3789
Q ss_pred EEEEEeCCcEEEEeecC-----------CCeEEEEEeeCCC-CCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCC
Q psy10778 448 LRLHTINAQLITSLASE-----------LRITSVTFSNAPE-GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALP 514 (556)
Q Consensus 448 I~iwdi~g~~i~~~~~~-----------~~i~~i~~s~~pd-g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~ 514 (556)
|++|+.+|+.+..+... .....++++ ++ + +++++...++.|++||..+++.+..+.. .+...
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d--~~~g---~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV--PHLD---QLCVADRENGRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE--TTTT---EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE--CCCC---EEEEEECCCCEEEEEECCCCcEEEEEeccccCCC
Confidence 99999889888777421 238899999 87 7 7888888999999999988999888853 45677
Q ss_pred eEEEEEec------CCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 515 VIAVTYSC------DSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 515 V~~l~~s~------dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
+.+++++| +|+..++...+..|++|++.+++.+..+
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 89999999 3333333344568999999887766554
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.51 E-value=5.8e-13 Score=147.34 Aligned_cols=221 Identities=13% Similarity=0.038 Sum_probs=151.4
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCCCCceE---------EEEEc--CCCCE-EEEEeC-CCcEEEEEee--e-ccCccccc
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPLGATIA---------TATTA--PDCHT-LWLGLT-SGNILVYEYE--L-NASTNKIE 363 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h~~~V~---------~i~~s--~dg~~-l~tgs~-Dg~I~vwd~~--~-~~~~~~~~ 363 (556)
+.++...||....+.....+. .|...+. ..+|+ |||+. |+.++. +..|.+++.. . +
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~------- 115 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGA------- 115 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCC-------
T ss_pred ccCCcEEEEEECCCCCcceeC-CCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCC-------
Confidence 557888888853332222332 4545555 56565 99998 776654 3444444433 1 2
Q ss_pred ccCCCeEeeC-----CCccEEEEEEccCCCEEEEEcCC----------CcEEEEeCCC------CeEEEEeC-CCCCCCC
Q psy10778 364 FCKPPTILLG-----HSACVTDLYLCAGFSVAVSSSED----------GTCLLWDINT------IGYIREIP-CVDPNTP 421 (556)
Q Consensus 364 ~~~~~~~l~~-----h~~~V~~l~~s~~~~~l~sgs~D----------g~I~iwdl~~------~~~v~~l~-~~h~~~~ 421 (556)
....+.. |...+.+++|+|||+.|++++.+ ..|.+||+.+ ++. +.+. . + ...
T Consensus 116 ---~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~-~-~~~ 189 (662)
T 3azo_A 116 ---VPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDD-A-HRF 189 (662)
T ss_dssp ---CCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCS-C-SSE
T ss_pred ---CCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEec-C-CCc
Confidence 1234444 67789999999999999988877 5899999987 554 4555 4 4 567
Q ss_pred eeEEEEeCCCCeEEEEeecCcC---CCCeEEEEEeC--C---cEEEEeec-CCCeEEEEEeeCCCCCcceEEEEEeCCC-
Q psy10778 422 VSHVTMSETNGEIASVLQTTKT---GGSILRLHTIN--A---QLITSLAS-ELRITSVTFSNAPEGVSQNVIVTGHSDG- 491 (556)
Q Consensus 422 V~~l~~sp~~~~i~s~s~~~~~---~d~~I~iwdi~--g---~~i~~~~~-~~~i~~i~~s~~pdg~~~~~l~tg~~dg- 491 (556)
+..++|||||+.|+.++..... ....|++||++ | +....... ...+..++|+ |+| +++++++.+|
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s--pdg---~l~~~~~~~~~ 264 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA--PDG---SLIVATDRTGW 264 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC--TTS---CEEEEECTTSS
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC--CCC---eEEEEECCCCC
Confidence 8889999999999987732100 12589999997 3 33333333 5789999999 999 7888888888
Q ss_pred -eEEEEeCCCCeEEEEecCCCCCC--------eEEEEEecCCCEEEEEcCCCcEEEEEc
Q psy10778 492 -TIQLWSGYKLAHLLTLNTNVALP--------VIAVTYSCDSQHLYASNTEGLVIIWES 541 (556)
Q Consensus 492 -~I~iwd~~~~~~~~~~~~~h~~~--------V~~l~~s~dg~~l~sgs~Dg~V~vwdl 541 (556)
.|.+||+.+++...... .+... +.+++|+++++++++++. |.+++|.+
T Consensus 265 ~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp CEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred eEEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 67777776666543333 22221 567899999999999998 99999944
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.50 E-value=8.1e-13 Score=133.60 Aligned_cols=207 Identities=12% Similarity=0.052 Sum_probs=139.6
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC---Cc--EEEEEeeeccCcccccccCCCeEeeCCC
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTS---GN--ILVYEYELNASTNKIEFCKPPTILLGHS 375 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D---g~--I~vwd~~~~~~~~~~~~~~~~~~l~~h~ 375 (556)
.++.|.+|+..+++...+ ..+.+++|+|||+.|+.++.+ +. |.+|++.++ +. ..+..+.
T Consensus 41 ~~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g---------~~-~~l~~~~ 104 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL---------SS-KKILEAK 104 (347)
T ss_dssp EEEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT---------EE-EEEEEES
T ss_pred ccceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC---------ce-EEEEcCC
Confidence 357789999987764333 458899999999999988754 34 555555433 11 2233333
Q ss_pred ccEEEEEEccCCCEEEEEcC---------------------------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEe
Q psy10778 376 ACVTDLYLCAGFSVAVSSSE---------------------------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMS 428 (556)
Q Consensus 376 ~~V~~l~~s~~~~~l~sgs~---------------------------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~s 428 (556)
. +..++|+|+|+.|+.++. ...|.+||+.+++.++.+.. . .+..++|+
T Consensus 105 ~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~s 179 (347)
T 2gop_A 105 N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWH 179 (347)
T ss_dssp E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEE
T ss_pred C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCC
Confidence 4 999999999998887763 25799999998876566654 4 67899999
Q ss_pred CCCCeEEEEeecCcC---C-CCeEEEEEeCCcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCC--------CeEEEE
Q psy10778 429 ETNGEIASVLQTTKT---G-GSILRLHTINAQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSD--------GTIQLW 496 (556)
Q Consensus 429 p~~~~i~s~s~~~~~---~-d~~I~iwdi~g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~d--------g~I~iw 496 (556)
|+| .++++...... . ...|.++| .++......+ ..+..+ + |+| +.|+.++.+ ..|.+|
T Consensus 180 pdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~-~~~~~~--s--pdg---~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 180 RDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFEK-VSFYAV--D--SDG---ERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp TTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEEE-ESEEEE--E--ECS---SCEEEEECCSSSCCCSSCEEEEE
T ss_pred CCe-EEEEEecccccccccccccEEEeC-CCceEEeccC-cceeeE--C--CCC---CEEEEEEccccCCccccceEEEE
Confidence 999 66665421000 0 22455556 4544333333 444443 6 888 677666543 478888
Q ss_pred eCCCCeEEEEecCCCCCCeEE-EEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 497 SGYKLAHLLTLNTNVALPVIA-VTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 497 d~~~~~~~~~~~~~h~~~V~~-l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
| +++.. .+..++...+.. +.|+ |+ ++++++.+|.+++| +.++
T Consensus 250 d--~~~~~-~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 250 D--GKEVM-GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp C--SSCEE-ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred C--CCceE-eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 8 55544 343356678886 9999 88 88999999999999 8743
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.49 E-value=4.1e-12 Score=128.32 Aligned_cols=223 Identities=8% Similarity=-0.031 Sum_probs=163.7
Q ss_pred ccCCCeEEEEeCCCCCCcceEcC-----CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 299 NECDNLIRLKMSKELPATPVIRP-----PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 299 gs~Dg~I~lw~~~~~~~~~~~~~-----~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
|+.+++|.++|.++++....+.. ........+++. +++..++...++.|.+||..++ +.+..+.
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~---------~~~~~i~- 81 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF---------KEVGRIT- 81 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC---------CEEEEEE-
T ss_pred CCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc---------EEEEEcC-
Confidence 45689999999998765443311 112345677774 3455666667899999998876 3345554
Q ss_pred CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-----CCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPN-----TPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~-----~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
.......+++++++++.++...++.|.+||+.+++....+.. . . .....+++ +++.+.++... .++.|
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-g-~~~~~~~~p~~i~~--~~~~lyv~~~~---~~~~v 154 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-P-DMDMESGSTEQMVQ--YGKYVYVNCWS---YQNRI 154 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-T-TCCTTTCBCCCEEE--ETTEEEEEECT---TCCEE
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-C-CccccCCCcceEEE--ECCEEEEEcCC---CCCEE
Confidence 346688999999986656655899999999999998887775 2 2 15667777 35555555410 27899
Q ss_pred EEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCC----------CeEEEEeCCCCeEEEEecCCCCCCeEE
Q psy10778 449 RLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSD----------GTIQLWSGYKLAHLLTLNTNVALPVIA 517 (556)
Q Consensus 449 ~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~d----------g~I~iwd~~~~~~~~~~~~~h~~~V~~ 517 (556)
.++|+. ++.+..+........++++ ++| ++++++..+ +.|.++|..+++....+..........
T Consensus 155 ~viD~~t~~~~~~i~~g~~p~~i~~~--~dG---~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~ 229 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQPTSLVMD--KYN---KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE 229 (328)
T ss_dssp EEEETTTTEEEEEEECSSCBCCCEEC--TTS---EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEE
T ss_pred EEEECCCCeEEEEEEcCCCccceEEc--CCC---CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCcee
Confidence 999997 7777777766677889998 888 777766654 799999999999887776322347899
Q ss_pred EEEecCCCEEEEEcCCCcEEEEEcCCCCC
Q psy10778 518 VTYSCDSQHLYASNTEGLVIIWESSSHNR 546 (556)
Q Consensus 518 l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~ 546 (556)
++++|+++.|+++.. .|.+||..+++.
T Consensus 230 la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred EEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 999999999998765 899999988654
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.49 E-value=2.6e-13 Score=152.56 Aligned_cols=195 Identities=13% Similarity=0.091 Sum_probs=142.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCcc-----EEEEEEccCCCEEEEEcCC----
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSAC-----VTDLYLCAGFSVAVSSSED---- 396 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~-----V~~l~~s~~~~~l~sgs~D---- 396 (556)
...+++|+|||++++++ ||+|++|++.++ +....+.+|... ...++|||||+.|++++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYG---------NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTC---------CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCC---------ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 35578999999988886 899999999876 333455666532 2458899999999998876
Q ss_pred -----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEeec---CCCe-
Q psy10778 397 -----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSLAS---ELRI- 467 (556)
Q Consensus 397 -----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~~~---~~~i- 467 (556)
+.+.+||+.+++.. .+.. + ...+..++|||||+.||.+. ++.|++|++.+.....+.. ...+
T Consensus 87 r~~~~~~~~~~d~~~~~~~-~l~~-~-~~~~~~~~~SPdG~~la~~~------~~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLI-TEER-I-PNNTQWVTWSPVGHKLAYVW------NNDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp SSCEEEEEEEEETTTTEEC-CSSC-C-CTTEEEEEECSSTTCEEEEE------TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred EEccceEEEEEECCCCcEE-Eccc-C-CCcceeeEECCCCCEEEEEE------CCeEEEEECCCCceEEEcCCCCcccee
Confidence 56779999998754 4555 6 67899999999999999885 6899999997332223221 1112
Q ss_pred ----------------EEEEEeeCCCCCcceEEEEEeCC------------------------------------CeEEE
Q psy10778 468 ----------------TSVTFSNAPEGVSQNVIVTGHSD------------------------------------GTIQL 495 (556)
Q Consensus 468 ----------------~~i~~s~~pdg~~~~~l~tg~~d------------------------------------g~I~i 495 (556)
.++.|| ||| +.|+.++.| ..|++
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wS--pDg---~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v 232 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWS--PNG---TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFV 232 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEEC--TTS---SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred cCcccccccchhcCCCcceEEC--CCC---CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEE
Confidence 358999 999 778776422 15888
Q ss_pred EeCCC---Ce--EEEEecC-----CCCCCeEEEEEecCCCEEEEEcC----CCcEEEEEcCCCC
Q psy10778 496 WSGYK---LA--HLLTLNT-----NVALPVIAVTYSCDSQHLYASNT----EGLVIIWESSSHN 545 (556)
Q Consensus 496 wd~~~---~~--~~~~~~~-----~h~~~V~~l~~s~dg~~l~sgs~----Dg~V~vwdl~~~~ 545 (556)
||+.+ ++ ....+.. ++...+..++|+|||+.++.... +..|.+||+.+++
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 99987 63 2333432 26777999999999997665533 3479999998876
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=4.1e-12 Score=123.53 Aligned_cols=225 Identities=10% Similarity=-0.033 Sum_probs=158.0
Q ss_pred eccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee-CCCc
Q psy10778 298 WNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL-GHSA 376 (556)
Q Consensus 298 ~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-~h~~ 376 (556)
....++.|.+|+..+.... .+...+...+.+++++++|+.+++.. ++.|.+|+.... ....+. ....
T Consensus 41 ~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~----------~~~~~~~~~~~ 108 (270)
T 1rwi_B 41 SEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN----------NQTVLPFDGLN 108 (270)
T ss_dssp ECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS----------CCEECCCCSCS
T ss_pred ccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc----------eEeeeecCCcC
Confidence 4467788988987654322 22223445678999999998666655 889999986643 112222 2335
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ 456 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~ 456 (556)
.+.+++++++++++++...++.|.+|+..+......... . ...+..+++++++..+++.. .++.|.+||.++.
T Consensus 109 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~-~~~p~~i~~~~~g~l~v~~~-----~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-G-LNDPDGVAVDNSGNVYVTDT-----DNNRVVKLEAESN 181 (270)
T ss_dssp SEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-S-CCSCCCEEECTTCCEEEEEG-----GGTEEEEECTTTC
T ss_pred CCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-c-CCCceeEEEeCCCCEEEEEC-----CCCEEEEEecCCC
Confidence 789999999999888888889999998765543332222 2 35678999999988666655 5689999999854
Q ss_pred EEEEe--ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 457 LITSL--ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 457 ~i~~~--~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
..... .....+.+++++ ++| +++++...++.|.+|+........ ....+...+.+++++++|+++++...++
T Consensus 182 ~~~~~~~~~~~~p~~i~~d--~~g---~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVD--EAG---TVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp CEEECCCSSCCSEEEEEEC--TTC---CEEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred ceEeecccCCCCceEEEEC--CCC---CEEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCCCCEEEEECCCC
Confidence 43332 223678899999 888 788888788999999986544333 3213346789999999999888989999
Q ss_pred cEEEEEcCCCCCc
Q psy10778 535 LVIIWESSSHNRT 547 (556)
Q Consensus 535 ~V~vwdl~~~~~~ 547 (556)
+|.++++...+..
T Consensus 256 ~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 256 RVVKLTSLEHHHH 268 (270)
T ss_dssp EEEEECCCGGGSC
T ss_pred EEEEEcCCCcccc
Confidence 9999999875543
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=2.1e-11 Score=122.53 Aligned_cols=224 Identities=9% Similarity=0.015 Sum_probs=156.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC----CcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTS----GNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D----g~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+++.+..++.|.+|+.++++...... .+...+.+++++++|++++++..+ +.|.+|+..++ .....
T Consensus 58 l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~---------~~~~~ 127 (333)
T 2dg1_A 58 LFLLDVFEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD---------NLQDI 127 (333)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC---------SCEEE
T ss_pred EEEEECCCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCC---------EEEEE
Confidence 55567788999999998876555442 456789999999999988877766 68888887654 11112
Q ss_pred ee--CCCccEEEEEEccCCCEEEEEcC------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 371 LL--GHSACVTDLYLCAGFSVAVSSSE------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 371 l~--~h~~~V~~l~~s~~~~~l~sgs~------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
+. .+...+.+++++++|+++++... .+.|..+|..+++....... ...+..++++|+++.++.+..
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~--- 201 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTET--- 201 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEG---
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeC---
Confidence 21 24467899999999998887654 35666777665544333332 355789999999987665542
Q ss_pred CCCCeEEEEEeC--CcEEEEe------e--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCC
Q psy10778 443 TGGSILRLHTIN--AQLITSL------A--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVA 512 (556)
Q Consensus 443 ~~d~~I~iwdi~--g~~i~~~------~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~ 512 (556)
.++.|.+||++ +..+..+ . ....+..++++ ++| +++++...++.|.+||. +++.+..+.. +.
T Consensus 202 -~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d--~~G---~l~v~~~~~~~v~~~d~-~g~~~~~~~~-~~ 273 (333)
T 2dg1_A 202 -TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID--SDD---NLYVAMYGQGRVLVFNK-RGYPIGQILI-PG 273 (333)
T ss_dssp -GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB--TTC---CEEEEEETTTEEEEECT-TSCEEEEEEC-TT
T ss_pred -CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC--CCC---CEEEEEcCCCEEEEECC-CCCEEEEEEc-CC
Confidence 56899999994 4432211 1 12367889999 888 78888778899999998 6777777752 22
Q ss_pred C------CeEEEEEecCCCEEEEEcCCC------cEEEEEcC
Q psy10778 513 L------PVIAVTYSCDSQHLYASNTEG------LVIIWESS 542 (556)
Q Consensus 513 ~------~V~~l~~s~dg~~l~sgs~Dg------~V~vwdl~ 542 (556)
. .+.+++|++|++.|+.++.+| .|...++.
T Consensus 274 ~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp GGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 2 689999999987777666553 45555554
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.46 E-value=4.6e-12 Score=127.97 Aligned_cols=234 Identities=9% Similarity=-0.061 Sum_probs=163.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|.++|..+++.+..+. .......++++++++..++...++.|.+||..++ +....+...
T Consensus 56 lyv~~~~~~~v~viD~~t~~~~~~i~--~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~---------~~~~~i~~g 124 (328)
T 3dsm_A 56 GWIVVNNSHVIFAIDINTFKEVGRIT--GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY---------EITGYIECP 124 (328)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEE--CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT---------EEEEEEECT
T ss_pred EEEEEcCCCEEEEEECcccEEEEEcC--CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC---------eEEEEEEcC
Confidence 55555678999999999988877664 3467889999888854444448899999998765 222233322
Q ss_pred C-----ccEEEEEEccCCCEEEEEc-CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC-----
Q psy10778 375 S-----ACVTDLYLCAGFSVAVSSS-EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT----- 443 (556)
Q Consensus 375 ~-----~~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~----- 443 (556)
. .....+++ .++.++++.. .++.|.++|+.+++.+.++.. ......++++++|+.++++......
T Consensus 125 ~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 125 DMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCCCCEEEEECCCccCCcccc
Confidence 2 14456666 4444555544 489999999999998888876 4556789999998866655410000
Q ss_pred CCCeEEEEEeC-CcEEEEeec--CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE-ecCCCCCCeEEEE
Q psy10778 444 GGSILRLHTIN-AQLITSLAS--ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT-LNTNVALPVIAVT 519 (556)
Q Consensus 444 ~d~~I~iwdi~-g~~i~~~~~--~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~-~~~~h~~~V~~l~ 519 (556)
..+.|.++|.. ++....+.. ......++++ |++ +.|.++.. .|.+||..+++.... +.........+++
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~--~d~---~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN--GTR---DTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC--TTS---CEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEe--cCC---CEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 02789999997 666666654 3478999999 888 67777665 899999988775321 1111246789999
Q ss_pred Eec-CCCEEEEE----cCCCcEEEEEcCCCCCcCeee
Q psy10778 520 YSC-DSQHLYAS----NTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 520 ~s~-dg~~l~sg----s~Dg~V~vwdl~~~~~~~~~~ 551 (556)
++| ++.+.++. ..++.|.+||.. ++.+.++.
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 999 55666665 578999999998 66655543
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.46 E-value=3.2e-12 Score=141.39 Aligned_cols=229 Identities=12% Similarity=-0.014 Sum_probs=150.6
Q ss_pred EEecc-CCCeEEEEeCC--C-CCCcceEcCC---CCCceEEEEEcCCCCEEEEEeCC----------CcEEEEEeeeccC
Q psy10778 296 ICWNE-CDNLIRLKMSK--E-LPATPVIRPP---LGATIATATTAPDCHTLWLGLTS----------GNILVYEYELNAS 358 (556)
Q Consensus 296 l~~gs-~Dg~I~lw~~~--~-~~~~~~~~~~---h~~~V~~i~~s~dg~~l~tgs~D----------g~I~vwd~~~~~~ 358 (556)
|++++ .+..|.+++.. + ++...+.... |...+.+++|+|||+.|++++.+ ..|++|++.+...
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 55443 36677778776 3 4433222111 56788999999999999999877 5788888875100
Q ss_pred c--ccccccCCCeEee-CCCccEEEEEEccCCCEEEEEcCC--------CcEEEEeCC-CC---eEEEEeCCCCCCCCee
Q psy10778 359 T--NKIEFCKPPTILL-GHSACVTDLYLCAGFSVAVSSSED--------GTCLLWDIN-TI---GYIREIPCVDPNTPVS 423 (556)
Q Consensus 359 ~--~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~D--------g~I~iwdl~-~~---~~v~~l~~~h~~~~V~ 423 (556)
. + + ...+. .+...+..++|+|||+.|+.++.+ ..|.+||+. ++ +..+.... + ...+.
T Consensus 174 ~~~~-----~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~-~~~~~ 245 (662)
T 3azo_A 174 ADRS-----A-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-P-EEAIA 245 (662)
T ss_dssp TCGG-----G-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-T-TBCEE
T ss_pred ccCC-----c-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-C-CceEc
Confidence 0 0 1 23444 566788889999999999887754 379999999 56 44444444 4 57899
Q ss_pred EEEEeCCCCeEEEEeecCcCCCC--eEEEEEeC-CcEEEEeecCCC---------eEEEEEeeCCCCCcceEEEEEeCCC
Q psy10778 424 HVTMSETNGEIASVLQTTKTGGS--ILRLHTIN-AQLITSLASELR---------ITSVTFSNAPEGVSQNVIVTGHSDG 491 (556)
Q Consensus 424 ~l~~sp~~~~i~s~s~~~~~~d~--~I~iwdi~-g~~i~~~~~~~~---------i~~i~~s~~pdg~~~~~l~tg~~dg 491 (556)
.++|+|||+.++++. .++ .|.+||+. ++......+... +.+++|+ +++ +++++++. +
T Consensus 246 ~~~~spdg~l~~~~~-----~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~--~~~---~~~~~~~~-~ 314 (662)
T 3azo_A 246 QAEWAPDGSLIVATD-----RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL--ANG---LIAVVHGK-G 314 (662)
T ss_dssp EEEECTTSCEEEEEC-----TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC--TTS---CEEEEEBS-S
T ss_pred ceEECCCCeEEEEEC-----CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEe--CCC---EEEEEEEc-C
Confidence 999999999555554 566 66666764 554433332221 4678888 788 89999988 9
Q ss_pred eEEEE--eCCCCeEEEEecCCCCCCeEEE-EEecCCCEEEEEcCCC--cEEEEEcCCCC
Q psy10778 492 TIQLW--SGYKLAHLLTLNTNVALPVIAV-TYSCDSQHLYASNTEG--LVIIWESSSHN 545 (556)
Q Consensus 492 ~I~iw--d~~~~~~~~~~~~~h~~~V~~l-~~s~dg~~l~sgs~Dg--~V~vwdl~~~~ 545 (556)
.++|| |+.+++ +..+. .+...+..+ +++.+.-.+++++.+. .|.+||+.+++
T Consensus 315 ~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 315 AAVLGILDPESGE-LVDAA-GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SCEEEEEETTTTE-EEECC-SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ccEEEEEECCCCc-EEEec-CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 99999 555555 66776 566677776 4443333334445454 45666665654
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.45 E-value=2.3e-11 Score=120.39 Aligned_cols=219 Identities=8% Similarity=-0.045 Sum_probs=154.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee--
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL-- 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-- 372 (556)
++..+..++.|..|+..++ ...+. .+...+.+++++++|+++++...++.|.+|+..++. ......
T Consensus 42 l~~~~~~~~~i~~~~~~~~--~~~~~-~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~---------~~~~~~~~ 109 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ--LSPEM-HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE---------WESIADSF 109 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC--EEEEE-SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC---------EEEEECEE
T ss_pred EEEEeCCCCEEEEEECCCC--eEEEE-CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc---------EEEEeecc
Confidence 5667778899999999876 33443 466779999999999988877777899999975441 111111
Q ss_pred -C-CCccEEEEEEccCCCEEEEE----c-------------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCe
Q psy10778 373 -G-HSACVTDLYLCAGFSVAVSS----S-------------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGE 433 (556)
Q Consensus 373 -~-h~~~V~~l~~s~~~~~l~sg----s-------------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~ 433 (556)
+ ....+.+++++++|+++++. + ..+.|..++.. ++.. .+.. + ......++|+|+++.
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~-~-~~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIR-D-RVKPNGLAFLPSGNL 185 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEEC-C-CSSEEEEEECTTSCE
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Eeec-C-CCCCccEEECCCCCE
Confidence 1 12346789999999988873 3 13456666655 4443 3333 3 567899999999998
Q ss_pred EEEEeecCcCCCCeEEEEEeC--CcE---EEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEe
Q psy10778 434 IASVLQTTKTGGSILRLHTIN--AQL---ITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTL 507 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~--g~~---i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~ 507 (556)
+++.+ .++.|.+|+++ |.+ ...+ .....+.+++++ ++| +++++. ++.|.+||.. ++.+..+
T Consensus 186 lv~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d--~~G---~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 186 LVSDT-----GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVD--AGG---LIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEET-----TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEB--TTS---CEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred EEEeC-----CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEEC--CCC---CEEEEc--CCeEEEECCC-CCEEEEE
Confidence 85555 67899999985 554 2222 123456789999 898 666655 7899999985 8888888
Q ss_pred cCCCCCCeEEEEE-ecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 508 NTNVALPVIAVTY-SCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 508 ~~~h~~~V~~l~~-s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
. .+.. +++++| +++++.|++++.+ .+.-++.++.+
T Consensus 253 ~-~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 253 L-TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp E-CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCB
T ss_pred E-CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccc
Confidence 7 4445 899999 5899989888876 45556665543
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.44 E-value=1.7e-11 Score=123.21 Aligned_cols=222 Identities=10% Similarity=0.038 Sum_probs=152.0
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
+.++.++.|.. +....+. .+...+.+++|+++|++++++..++.|.+|+..++ +.......+...+.
T Consensus 24 ~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~~~ 90 (333)
T 2dg1_A 24 ISESELQTITA---EPWLEIS-KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK---------EIKRPFVSHKANPA 90 (333)
T ss_dssp CCGGGSCEEEC---EEEEEEE-SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC---------CEEEEEECSSSSEE
T ss_pred eecccCccccc---ceeEEEe-ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC---------cEEEEeeCCCCCcc
Confidence 45667777722 2222232 45567799999999998888888999999987654 21222335667899
Q ss_pred EEEEccCCCEEEEEcCC----CcEEEEeCCCCeEEEEeCC-CCCCCCeeEEEEeCCCCeEEEEeecC-cCCCCeEEEEEe
Q psy10778 380 DLYLCAGFSVAVSSSED----GTCLLWDINTIGYIREIPC-VDPNTPVSHVTMSETNGEIASVLQTT-KTGGSILRLHTI 453 (556)
Q Consensus 380 ~l~~s~~~~~l~sgs~D----g~I~iwdl~~~~~v~~l~~-~h~~~~V~~l~~sp~~~~i~s~s~~~-~~~d~~I~iwdi 453 (556)
++++++++++++++..+ +.|.+||..+++....+.. .+ ...+..++++|++..+++..... ....+.|..+|.
T Consensus 91 ~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 91 AIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST-AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp EEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred eEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-CCcccceEECCCCCEEEEeccccccCCCceEEEEeC
Confidence 99999999988887776 6899999987765434431 02 46789999999987776654100 001356666666
Q ss_pred CC-cEEEEeecCCCeEEEEEeeCCCCCcceEE-EEEeCCCeEEEEeCCC-CeEEEE--------ecCCCCCCeEEEEEec
Q psy10778 454 NA-QLITSLASELRITSVTFSNAPEGVSQNVI-VTGHSDGTIQLWSGYK-LAHLLT--------LNTNVALPVIAVTYSC 522 (556)
Q Consensus 454 ~g-~~i~~~~~~~~i~~i~~s~~pdg~~~~~l-~tg~~dg~I~iwd~~~-~~~~~~--------~~~~h~~~V~~l~~s~ 522 (556)
++ +..........+..++|+ ++| +.| ++.+.++.|.+||..+ ++.+.. +. ++ ..+..+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~i~~~--~dg---~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-~~-~~~~~i~~d~ 242 (333)
T 2dg1_A 170 DFRTVTPIIQNISVANGIALS--TDE---KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT-GH-EGPDSCCIDS 242 (333)
T ss_dssp TSCCEEEEEEEESSEEEEEEC--TTS---SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC-SS-SEEEEEEEBT
T ss_pred CCCEEEEeecCCCcccceEEC--CCC---CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC-CC-CCCCceEECC
Confidence 64 443333334567899999 888 655 5555688999999853 332211 11 22 4688999999
Q ss_pred CCCEEEEEcCCCcEEEEEcC
Q psy10778 523 DSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 523 dg~~l~sgs~Dg~V~vwdl~ 542 (556)
+|+++++...++.|.+||..
T Consensus 243 ~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp TCCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEcCCCEEEEECCC
Confidence 99988888788999999984
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.44 E-value=1.1e-12 Score=134.63 Aligned_cols=222 Identities=9% Similarity=-0.019 Sum_probs=145.5
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE--
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD-- 380 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~-- 380 (556)
..|.+|+..+++...... .+......+.|+|||+.|+.++.++.|++|++.++ +.......+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~---------~~~~~~~~~~~~~~~g~ 129 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTE-GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL---------EEQVIYTVDEEWKGYGT 129 (396)
T ss_dssp CEEEEEETTTTEEEECCC-SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC---------CEEEEEECCTTEEEEEE
T ss_pred ceEEEEECCCCcEEEeec-CCCCccccceECCCCCEEEEEEcCCcEEEEECCCC---------CcEEEEecccccCCCCC
Confidence 478888988775443322 22222334789999999999999999999998754 112222323332222
Q ss_pred -----------------EEEccCCCEEEEE-----cCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC-CCCeEEEE
Q psy10778 381 -----------------LYLCAGFSVAVSS-----SEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE-TNGEIASV 437 (556)
Q Consensus 381 -----------------l~~s~~~~~l~sg-----s~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp-~~~~i~s~ 437 (556)
+.|+|+++.++.+ ..+..|.+||+.+++....... ...+..++|+| +++.|+.+
T Consensus 130 ~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~---~~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 130 WVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD---TAWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp EEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE---SSCEEEEEEETTEEEEEEEE
T ss_pred EEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC---CcccccceECCCCCCEEEEE
Confidence 3456777765543 3567899999998876555543 67799999999 78878877
Q ss_pred eecCc-CCCCeEEEEEeCCcEEEEeec---CCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCeEEEEec
Q psy10778 438 LQTTK-TGGSILRLHTINAQLITSLAS---ELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 438 s~~~~-~~d~~I~iwdi~g~~i~~~~~---~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~~~~~~~ 508 (556)
+.... .....|.+||+++.....+.. ...+..++|+ |+| +.|+.++.+ +.|++||+.+++......
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s--pdg---~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWI--PDG---SAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEEC--TTS---SCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred ecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEEC--CCC---CEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 63100 001578889987543333322 2257889999 898 666655433 459999998876544332
Q ss_pred CCCCCCeEEEEEec-CCCEEEEEc----------------CCCcEEEEEcCCCCC
Q psy10778 509 TNVALPVIAVTYSC-DSQHLYASN----------------TEGLVIIWESSSHNR 546 (556)
Q Consensus 509 ~~h~~~V~~l~~s~-dg~~l~sgs----------------~Dg~V~vwdl~~~~~ 546 (556)
. . ... +.|+| ||+.+++++ .++.|++||+.+++.
T Consensus 282 -~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 282 -M-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -C-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred -C-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 1 1 233 89999 999888754 347899999987654
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=6.3e-12 Score=123.81 Aligned_cols=191 Identities=8% Similarity=0.004 Sum_probs=154.1
Q ss_pred CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCC-ccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEe
Q psy10778 335 DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHS-ACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREI 413 (556)
Q Consensus 335 dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l 413 (556)
.++.|++++.|+.|.+||..++ +.+..+..+. ..+.+++++|+|++++ +.++.|..||. +++.+.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG---------~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK---------EIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT---------EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC---------eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 4589999999999999998766 4445666655 4788999999999888 35788999999 79999998
Q ss_pred CCCCCCCCeeEEEEeCCCCeEEEEeecCcCC-CCeEEEEEeCCcEEEEeecC-------CCeEEEEEeeCCCCCcceEEE
Q psy10778 414 PCVDPNTPVSHVTMSETNGEIASVLQTTKTG-GSILRLHTINAQLITSLASE-------LRITSVTFSNAPEGVSQNVIV 485 (556)
Q Consensus 414 ~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~-d~~I~iwdi~g~~i~~~~~~-------~~i~~i~~s~~pdg~~~~~l~ 485 (556)
.. +....+.++.+.++|+.+++.+ . ++.+..+|.+|+.+..+... .....++.. ++| ++++
T Consensus 72 ~~-~~~~~~~~~~~~~dG~~lv~~~-----~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~--~~G---~~lv 140 (276)
T 3no2_A 72 AA-PAGCEMQTARILPDGNALVAWC-----GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKN--KKG---NYLV 140 (276)
T ss_dssp EC-CTTCEEEEEEECTTSCEEEEEE-----STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEEC--TTS---CEEE
T ss_pred cC-CCCccccccEECCCCCEEEEec-----CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceEC--CCC---CEEE
Confidence 86 3135788999999999999887 5 67888888889988877532 133455666 888 8999
Q ss_pred EEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 486 TGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 486 tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+...++.|..||.. |+.+.++.. ...+.++...++|..+++++.+++|..+|..+++.+..+.
T Consensus 141 ~~~~~~~v~~~d~~-G~~~w~~~~--~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 141 PLFATSEVREIAPN-GQLLNSVKL--SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EETTTTEEEEECTT-SCEEEEEEC--SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EecCCCEEEEECCC-CCEEEEEEC--CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 99999999999987 999999973 3456778889999999999988899999999877765553
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=1.2e-11 Score=138.12 Aligned_cols=223 Identities=7% Similarity=-0.045 Sum_probs=157.2
Q ss_pred eEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCc----------------EEEEEeeeccCcccccccCC
Q psy10778 304 LIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGN----------------ILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 304 ~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~----------------I~vwd~~~~~~~~~~~~~~~ 367 (556)
.|++||+.+++...... .+ ..+..++|+|||+.|+.++.++. |++|++.++.. +.
T Consensus 152 ~i~v~d~~tg~~~~~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~-------~~ 222 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVL-ER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS-------ED 222 (710)
T ss_dssp EEEEEETTTTEEEEEEE-EE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG-------GC
T ss_pred EEEEEECCCCCCCcccc-cC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc-------cc
Confidence 89999999887655332 12 22668999999999999988766 89999865411 11
Q ss_pred CeEee--CCCccEEEEEEccCCCEEEEEcC-----CCcEEEEeCCC------Ce-EEEEeCCCCCCCCeeEEEEeCCCCe
Q psy10778 368 PTILL--GHSACVTDLYLCAGFSVAVSSSE-----DGTCLLWDINT------IG-YIREIPCVDPNTPVSHVTMSETNGE 433 (556)
Q Consensus 368 ~~~l~--~h~~~V~~l~~s~~~~~l~sgs~-----Dg~I~iwdl~~------~~-~v~~l~~~h~~~~V~~l~~sp~~~~ 433 (556)
..... .|...+..+.|+|+|++|+.++. +..|.+||+.+ +. ..+.+.. + ...+.. .|+++|+.
T Consensus 223 ~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~s~dg~~ 299 (710)
T 2xdw_A 223 ILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID-N-FEGEYD-YVTNEGTV 299 (710)
T ss_dssp EEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC-S-SSSCEE-EEEEETTE
T ss_pred eEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC-C-CCcEEE-EEeccCCE
Confidence 12222 35566889999999998887664 56899999986 43 3555555 4 444444 58899998
Q ss_pred EEEEeecCcCCCCeEEEEEeCC-c---EEEEeecC--CCeEEEEEeeCCCCCcceEEEEEeCCCe--EEEEeCCCCeEEE
Q psy10778 434 IASVLQTTKTGGSILRLHTINA-Q---LITSLASE--LRITSVTFSNAPEGVSQNVIVTGHSDGT--IQLWSGYKLAHLL 505 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~g-~---~i~~~~~~--~~i~~i~~s~~pdg~~~~~l~tg~~dg~--I~iwd~~~~~~~~ 505 (556)
|+..+... .....|.+||+++ . ......+. ..+..++|+ +++ .++++...++. |.+|++.+++.+.
T Consensus 300 l~~~s~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 300 FTFKTNRH-SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV--RSN---FLVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp EEEEECTT-CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE--TTT---EEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EEEEECCC-CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE--cCC---EEEEEEEECCEEEEEEEECCCCCEEE
Confidence 88876321 1245799999873 2 12223333 367889998 677 78888888885 5667776788778
Q ss_pred EecCCCCCCeEEEEEecCCCEEEEE-c---CCCcEEEEEcCCCC
Q psy10778 506 TLNTNVALPVIAVTYSCDSQHLYAS-N---TEGLVIIWESSSHN 545 (556)
Q Consensus 506 ~~~~~h~~~V~~l~~s~dg~~l~sg-s---~Dg~V~vwdl~~~~ 545 (556)
.+. .+...+..++++|++..++.. + ..+.|+.||+.+++
T Consensus 374 ~l~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 374 IFP-LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEC-CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecC-CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 887 557788899999998766633 2 35789999998866
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.41 E-value=6.1e-11 Score=117.30 Aligned_cols=201 Identities=8% Similarity=-0.035 Sum_probs=146.7
Q ss_pred CCCceEEEEEcCCCC-EEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEE
Q psy10778 323 LGATIATATTAPDCH-TLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLL 401 (556)
Q Consensus 323 h~~~V~~i~~s~dg~-~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~i 401 (556)
+.....+++|+|+|+ .++++..++.|..|+...+ ...+..+...+.+++++++|+++++...++.|.+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-----------LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-----------EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-----------eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 445678999999998 7888888999999997642 2455667788999999999998888888899999
Q ss_pred EeCCCCeEEEEeCCC--CCCCCeeEEEEeCCCCeEEEEeecC------------cCCCCeEEEEEeCCcEEEEeecCCCe
Q psy10778 402 WDINTIGYIREIPCV--DPNTPVSHVTMSETNGEIASVLQTT------------KTGGSILRLHTINAQLITSLASELRI 467 (556)
Q Consensus 402 wdl~~~~~v~~l~~~--h~~~~V~~l~~sp~~~~i~s~s~~~------------~~~d~~I~iwdi~g~~i~~~~~~~~i 467 (556)
||..+++........ .....+..++++|+|..+++.+..+ ....+.|..++..++...........
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKP 174 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSE
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCC
Confidence 999888754433210 1023567899999998777632000 00134566666666655444556678
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-CCeE---EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-KLAH---LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-~~~~---~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
..++|+ |+| +.+++.+.++.|.+|++. +++. ...+ ..+...+.+++++++|+++++. ++.|.+|+..
T Consensus 175 ~gi~~s--~dg---~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 175 NGLAFL--PSG---NLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEEEC--TTS---CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred ccEEEC--CCC---CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 999999 898 777777788999999986 4554 3444 2445667889999999877666 8899999986
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.38 E-value=3.3e-10 Score=122.64 Aligned_cols=226 Identities=9% Similarity=-0.010 Sum_probs=166.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEee--eccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYE--LNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~--~~~~~~~~~~~~~~~~l~ 372 (556)
++++...+++|.++|..+++.+..+..+ ..+..++++|||+++++++.|+.|.+||+. +. +.+..+.
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~---------~~v~~i~ 237 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP---------TTVAEIK 237 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC---------CEEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCC---------cEeEEEe
Confidence 6677788999999999999888777643 356799999999999999999999999984 33 2334554
Q ss_pred CCCccEEEEEEc----cCCCEEEEEcC-CCcEEEEeCCCCeEEEEeCCCC----------CCCCeeEEEEeCCCCeEEEE
Q psy10778 373 GHSACVTDLYLC----AGFSVAVSSSE-DGTCLLWDINTIGYIREIPCVD----------PNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 373 ~h~~~V~~l~~s----~~~~~l~sgs~-Dg~I~iwdl~~~~~v~~l~~~h----------~~~~V~~l~~sp~~~~i~s~ 437 (556)
... ....++++ |+|+++++++. ++++.++|..+++.+.++.. . +...+..+..++++..++..
T Consensus 238 ~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~-~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 238 IGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST-RGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp CCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC-CEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred cCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec-cccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 433 35789999 69998777664 59999999999998887653 1 01257788889887665555
Q ss_pred eecCcCCCCeEEEEEeCC---cEEEEeecCCCeEEEEEeeCCCCCcceEEEEE-eCCCeEEEEeCCCCeEEEEecC-C--
Q psy10778 438 LQTTKTGGSILRLHTINA---QLITSLASELRITSVTFSNAPEGVSQNVIVTG-HSDGTIQLWSGYKLAHLLTLNT-N-- 510 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~g---~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg-~~dg~I~iwd~~~~~~~~~~~~-~-- 510 (556)
.. ..|.|.++|... ..+..+........+.|+ ++| ++++++ ..+++|.++|+.+++.+..+.. +
T Consensus 316 ~~----~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~--pdg---r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~ 386 (567)
T 1qks_A 316 VK----ETGKILLVDYTDLNNLKTTEISAERFLHDGGLD--GSH---RYFITAANARNKLVVIDTKEGKLVAIEDTGGQT 386 (567)
T ss_dssp ET----TTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC--TTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred ec----CCCeEEEEecCCCccceeeeeeccccccCceEC--CCC---CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC
Confidence 42 679999999862 233444556678899999 898 666554 4678999999999998887764 2
Q ss_pred -CCCCeEEEEEecCCCEEE-EEc-CCCcEEEEEcCC
Q psy10778 511 -VALPVIAVTYSCDSQHLY-ASN-TEGLVIIWESSS 543 (556)
Q Consensus 511 -h~~~V~~l~~s~dg~~l~-sgs-~Dg~V~vwdl~~ 543 (556)
|.+.-.. -++|++..+. ++. .++.|.++|..+
T Consensus 387 Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 387 PHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp BCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 3222222 2588755444 443 468999999987
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.37 E-value=1.4e-12 Score=133.91 Aligned_cols=202 Identities=8% Similarity=-0.036 Sum_probs=133.1
Q ss_pred eEEEEEcCCCCEEEEEeCC-C--cEEEEEeeeccCcccccccCCCeEeeCCCcc-EEEEEEccCCCEEEEEcCCCcEEEE
Q psy10778 327 IATATTAPDCHTLWLGLTS-G--NILVYEYELNASTNKIEFCKPPTILLGHSAC-VTDLYLCAGFSVAVSSSEDGTCLLW 402 (556)
Q Consensus 327 V~~i~~s~dg~~l~tgs~D-g--~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~-V~~l~~s~~~~~l~sgs~Dg~I~iw 402 (556)
+.+++|+|||++|+.+... + .|.+|++.++ +. ..+..+... ...+.|+|+|+.|+.++.++.|.+|
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~---------~~-~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~ 107 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ---------QA-VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKV 107 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT---------EE-EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC---------cE-EEeecCCCCccccceECCCCCEEEEEEcCCcEEEE
Confidence 6678899999998877543 3 5666676543 11 223333333 3347899999999999999999999
Q ss_pred eCCCCeEEEEeCCCCCCCCeeE-------------------EEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee
Q psy10778 403 DINTIGYIREIPCVDPNTPVSH-------------------VTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLA 462 (556)
Q Consensus 403 dl~~~~~v~~l~~~h~~~~V~~-------------------l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~ 462 (556)
|+.+++....... + ...... ++++|+++.++.........+..|++||+. ++......
T Consensus 108 d~~~~~~~~~~~~-~-~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~ 185 (396)
T 3c5m_A 108 DLETLEEQVIYTV-D-EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ 185 (396)
T ss_dssp ETTTCCEEEEEEC-C-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE
T ss_pred ECCCCCcEEEEec-c-cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc
Confidence 9998876665554 3 332222 245666665554320000156789999997 55555556
Q ss_pred cCCCeEEEEEeeCC-CCCcceEEEEEeCC------CeEEEEeCCCCeEEEEecCCC-CCCeEEEEEecCCCEEEEEcCC-
Q psy10778 463 SELRITSVTFSNAP-EGVSQNVIVTGHSD------GTIQLWSGYKLAHLLTLNTNV-ALPVIAVTYSCDSQHLYASNTE- 533 (556)
Q Consensus 463 ~~~~i~~i~~s~~p-dg~~~~~l~tg~~d------g~I~iwd~~~~~~~~~~~~~h-~~~V~~l~~s~dg~~l~sgs~D- 533 (556)
+...+..+.|+ | ++ ..|+..+.+ ..|.+||+..++. ..+.... ...+..++|+|||+.|+.++.+
T Consensus 186 ~~~~~~~~~~s--p~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 186 DTAWLGHPIYR--PFDD---STVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp ESSCEEEEEEE--TTEE---EEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred CCcccccceEC--CCCC---CEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 67789999999 8 67 666655543 4688899865543 3343111 2358889999999987766543
Q ss_pred ----CcEEEEEcCCCCC
Q psy10778 534 ----GLVIIWESSSHNR 546 (556)
Q Consensus 534 ----g~V~vwdl~~~~~ 546 (556)
+.|++||+.+++.
T Consensus 260 ~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 260 GQTDRVIYKANPETLEN 276 (396)
T ss_dssp TTCCEEEEEECTTTCCE
T ss_pred CCccceEEEEECCCCCe
Confidence 4499999987653
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=2e-10 Score=113.95 Aligned_cols=224 Identities=9% Similarity=0.025 Sum_probs=152.6
Q ss_pred ccCCCeEEEEeCCCCCCcceEc---CCCCCceEEEEEcCC-CCEEEEEeCCCcEEEEEeeeccCcccccccCC-CeEee-
Q psy10778 299 NECDNLIRLKMSKELPATPVIR---PPLGATIATATTAPD-CHTLWLGLTSGNILVYEYELNASTNKIEFCKP-PTILL- 372 (556)
Q Consensus 299 gs~Dg~I~lw~~~~~~~~~~~~---~~h~~~V~~i~~s~d-g~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~-~~~l~- 372 (556)
+..++.|.+|+..+++...... .++...+.+++++++ |+++++. ..+.|.+|+.. +. .. .. .....
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~----~~--~~~~~~~~~ 113 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GT----FE--EIAKKDSEG 113 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SC----EE--ECCSBCTTS
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CC----EE--EEEeccCCC
Confidence 4667889999987766543321 124467899999999 6555544 44578888866 31 00 00 00001
Q ss_pred CCCccEEEEEEccCCCEEEEEcCC---------------CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEe----CCCCe
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSED---------------GTCLLWDINTIGYIREIPCVDPNTPVSHVTMS----ETNGE 433 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~D---------------g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~s----p~~~~ 433 (556)
.....+.+++++++|++.++...+ +.|..+|.. ++....... ......++++ ++++.
T Consensus 114 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~~~~i~~~~~~d~dg~~ 189 (314)
T 1pjx_A 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA---FQFPNGIAVRHMNDGRPYQ 189 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE---ESSEEEEEEEECTTSCEEE
T ss_pred ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC---CCCcceEEEecccCCCCCE
Confidence 122457899999999988877655 567778776 554443333 3557889999 99876
Q ss_pred EEEEeecCcCCCCeEEEEEeC--CcE-----EEEeecC--CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEE
Q psy10778 434 IASVLQTTKTGGSILRLHTIN--AQL-----ITSLASE--LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHL 504 (556)
Q Consensus 434 i~s~s~~~~~~d~~I~iwdi~--g~~-----i~~~~~~--~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~ 504 (556)
++.+.. .++.|.+||.+ ++. ...+... ..+..++++ ++| +++++...++.|.+||..+++.+
T Consensus 190 l~v~~~----~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d--~~G---~l~v~~~~~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 190 LIVAET----PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD--EDN---NLLVANWGSSHIEVFGPDGGQPK 260 (314)
T ss_dssp EEEEET----TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB--TTC---CEEEEEETTTEEEEECTTCBSCS
T ss_pred EEEEEC----CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC--CCC---CEEEEEcCCCEEEEEcCCCCcEe
Confidence 665542 57899999975 432 1222212 567889999 888 78888878899999998877776
Q ss_pred EEecCCCCCCeEEEEEecCCCEE-EEEcCCCcEEEEEcCCC
Q psy10778 505 LTLNTNVALPVIAVTYSCDSQHL-YASNTEGLVIIWESSSH 544 (556)
Q Consensus 505 ~~~~~~h~~~V~~l~~s~dg~~l-~sgs~Dg~V~vwdl~~~ 544 (556)
..+. .+...+.+++++++++.| ++...++.|..|++...
T Consensus 261 ~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 261 MRIR-CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEE-CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEe-CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 6665 445789999999999955 45556789999998763
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.36 E-value=1.1e-09 Score=107.36 Aligned_cols=224 Identities=9% Similarity=-0.086 Sum_probs=159.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|.+|+.. ++........+...+.+++++++|...++...++.|..|+.... .. ...+...
T Consensus 28 l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-----~~----~~~~~~~ 97 (299)
T 2z2n_A 28 VWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-----IK----EYTLPNP 97 (299)
T ss_dssp EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-----EE----EEECSST
T ss_pred EEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-----EE----EEeCCCc
Confidence 33334456788888887 54433322234567999999999998888777888988886411 00 0111234
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEE-eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIRE-IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~-l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...+.++++.+++.+.++...++.|.+||. +++.... ... . ...+..+++++++..+++.. .++.|..||.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~-~-~~~~~~i~~~~~g~l~v~~~-----~~~~i~~~~~ 169 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPN-K-GSYPSFITLGSDNALWFTEN-----QNNAIGRITE 169 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS-T-TCCEEEEEECTTSCEEEEET-----TTTEEEEECT
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCC-C-CCCCceEEEcCCCCEEEEeC-----CCCEEEEEcC
Confidence 567899999999998888888899999998 5554432 332 3 46789999999987776665 5789999999
Q ss_pred CCcEEEEe--ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 454 NAQLITSL--ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 454 ~g~~i~~~--~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
+++..... .....+.+++++ ++| ++.++...++.|.+||. +++........+...+.+++++++|++.++..
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~--~~g---~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKG--NDD---ALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEEC--TTS---SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CCcEEEeeCCCCCCcceeEEEC--CCC---CEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 76654431 134568899998 888 77777767889999998 66644321213456799999999999777776
Q ss_pred CCCcEEEEEcC
Q psy10778 532 TEGLVIIWESS 542 (556)
Q Consensus 532 ~Dg~V~vwdl~ 542 (556)
.++.|..|+..
T Consensus 244 ~~~~i~~~d~~ 254 (299)
T 2z2n_A 244 GANKIGRLTSN 254 (299)
T ss_dssp TTTEEEEEETT
T ss_pred CCceEEEECCC
Confidence 78899999983
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.35 E-value=5e-11 Score=133.24 Aligned_cols=207 Identities=8% Similarity=-0.085 Sum_probs=137.9
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCC-----cEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC
Q psy10778 322 PLGATIATATTAPDCHTLWLGLTSG-----NILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED 396 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~Dg-----~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D 396 (556)
+|...+..++|||||++||.++.++ +|++||+.++ +...... ....+..++|+|||+.|+.++.+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---------~~~~~~~-~~~~~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA---------KELPDVL-ERVKFSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT---------EEEEEEE-EEECSCCEEECTTSSEEEEEECC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---------CCCcccc-cCcccceEEEEeCCCEEEEEEEC
Confidence 3444688999999999999876544 8999999876 1112111 11236679999999999988887
Q ss_pred Cc----------------EEEEeCCCCeE--EEEeCCC-CCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC--
Q psy10778 397 GT----------------CLLWDINTIGY--IREIPCV-DPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA-- 455 (556)
Q Consensus 397 g~----------------I~iwdl~~~~~--v~~l~~~-h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g-- 455 (556)
+. |.+|++.+++. ...+... + ...+..++|+|||++|+.++......+..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCC-CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc
Confidence 66 99999988752 2222220 3 4457899999999999988743211267899999864
Q ss_pred ----c--EEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeC----CCeEEEEeCCCCe--EEEEecCCCC-CCeEEEEEe
Q psy10778 456 ----Q--LITSL-ASELRITSVTFSNAPEGVSQNVIVTGHS----DGTIQLWSGYKLA--HLLTLNTNVA-LPVIAVTYS 521 (556)
Q Consensus 456 ----~--~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~----dg~I~iwd~~~~~--~~~~~~~~h~-~~V~~l~~s 521 (556)
. ....+ .+...+.. .|+ ++| ..|+..+. ++.|.+||+.+++ ....+...+. ..+.+++|+
T Consensus 271 ~~~~~~~~~~~l~~~~~~~~~-~~s--~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGEYD-YVT--NEG---TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp SSSCSSCCCEEEECSSSSCEE-EEE--EET---TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE
T ss_pred cccCCccceEEeeCCCCcEEE-EEe--ccC---CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE
Confidence 2 23333 34444444 477 666 45544443 3479999997764 2234432222 368889999
Q ss_pred cCCCEEEEEcCCCc--EEEEEcCCCC
Q psy10778 522 CDSQHLYASNTEGL--VIIWESSSHN 545 (556)
Q Consensus 522 ~dg~~l~sgs~Dg~--V~vwdl~~~~ 545 (556)
+++.++++...||. |.+|++.+++
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred cCCEEEEEEEECCEEEEEEEECCCCC
Confidence 88888888888884 5667775554
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.31 E-value=1.6e-09 Score=111.37 Aligned_cols=222 Identities=9% Similarity=-0.051 Sum_probs=143.1
Q ss_pred eEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe----------CCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 304 LIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL----------TSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 304 ~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
.|.++|..+++.+..+..+. .+ .++++|||+.++++. .++.|.+||..+. +.+..+.-
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~---------~~~~~i~~ 115 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF---------LPIADIEL 115 (373)
T ss_pred EEEEEECCCCeEEEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC---------cEEEEEEC
Confidence 88999999888776665432 23 899999999999886 3678999998764 22222221
Q ss_pred C-------CccEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEE-eCCCCCCCCee--------EEEEeCCCCeEE
Q psy10778 374 H-------SACVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIRE-IPCVDPNTPVS--------HVTMSETNGEIA 435 (556)
Q Consensus 374 h-------~~~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~-l~~~h~~~~V~--------~l~~sp~~~~i~ 435 (556)
. ...-..++++|+|++|+.++. ++.|.++| .+++.+.+ +.. ...+. -++.++++..++
T Consensus 116 ~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~dg~~~~ 191 (373)
T 2mad_H 116 PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS---PTCYHIHPGAPSTFYLLCAQGGLAK 191 (373)
T ss_pred CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC---CceEEEEeCCCceEEEEcCCCCEEE
Confidence 1 123457999999999988764 57899999 99998888 654 22111 112222222111
Q ss_pred EEeecC---------------------------------cCCCCeEEEEEeCCc---EEEEeec-----------CCCeE
Q psy10778 436 SVLQTT---------------------------------KTGGSILRLHTINAQ---LITSLAS-----------ELRIT 468 (556)
Q Consensus 436 s~s~~~---------------------------------~~~d~~I~iwdi~g~---~i~~~~~-----------~~~i~ 468 (556)
... .+ ....+.+.+.|+.+. .+..+.. .....
T Consensus 192 vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 270 (373)
T 2mad_H 192 TDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred EEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceE
Confidence 100 00 002234455555321 1111110 12233
Q ss_pred EEEEeeCCCCCcceEEEEEeC----------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC-EEEEEc-CCCcE
Q psy10778 469 SVTFSNAPEGVSQNVIVTGHS----------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ-HLYASN-TEGLV 536 (556)
Q Consensus 469 ~i~~s~~pdg~~~~~l~tg~~----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~sgs-~Dg~V 536 (556)
.++++ +++ +.+.++.. ++.|.++|..+++.+.++.. .....+++|+|||+ .++++. .++.|
T Consensus 271 ~~~~s--~d~---~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 271 QVAYL--KSS---DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred eEEEC--CCC---CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 36677 777 55555432 35899999999999999973 34689999999999 788877 58999
Q ss_pred EEEEcCCCCCcCe
Q psy10778 537 IIWESSSHNRTPK 549 (556)
Q Consensus 537 ~vwdl~~~~~~~~ 549 (556)
.++|+.+.+.+.+
T Consensus 344 ~ViD~~t~~vv~~ 356 (373)
T 2mad_H 344 HIYDAGAGDQDQS 356 (373)
T ss_pred EEEECCCCCEEee
Confidence 9999999877655
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.31 E-value=7.2e-11 Score=131.62 Aligned_cols=227 Identities=9% Similarity=-0.068 Sum_probs=153.4
Q ss_pred eccCCCeEEEEeCCCCCCc-ceEcCCCCCce--EEEEEcCCCCEEEEEeCCCc-------------EEEEEeeeccCccc
Q psy10778 298 WNECDNLIRLKMSKELPAT-PVIRPPLGATI--ATATTAPDCHTLWLGLTSGN-------------ILVYEYELNASTNK 361 (556)
Q Consensus 298 ~gs~Dg~I~lw~~~~~~~~-~~~~~~h~~~V--~~i~~s~dg~~l~tgs~Dg~-------------I~vwd~~~~~~~~~ 361 (556)
.|+.+..|++||+.+++.. .. +...+ ..++|+|||+.|+.++.|.. |++|++.++....
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~----~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~- 216 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVD----VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD- 216 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSC----CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-
T ss_pred CCCceEEEEEEECCCCCCcCCc----ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-
Confidence 4566789999999988764 21 21222 67899999999999988776 9999987652111
Q ss_pred ccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC----cEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEE
Q psy10778 362 IEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG----TCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 362 ~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg----~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~ 437 (556)
..+.....|...+.++.|+|+|++|+.++.++ .|.+||..+++.. .+.. + ...+....+ ++++ ++..
T Consensus 217 ----~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~-~-~~~~~~~~~-~~g~-l~~~ 287 (695)
T 2bkl_A 217 ----TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVK-G-VGAKYEVHA-WKDR-FYVL 287 (695)
T ss_dssp ----EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEE-C-SSCCEEEEE-ETTE-EEEE
T ss_pred ----eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eeec-C-CCceEEEEe-cCCc-EEEE
Confidence 11122334566889999999999888777665 6777776655543 3333 3 445566656 5666 6555
Q ss_pred eecCcCCCCeEEEEEeC-CcE---EEEeec--CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-CCeEEEEecCC
Q psy10778 438 LQTTKTGGSILRLHTIN-AQL---ITSLAS--ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-KLAHLLTLNTN 510 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~-g~~---i~~~~~--~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-~~~~~~~~~~~ 510 (556)
+.. ...++.|.+||++ +.. ...+.+ ...+..++++ ++ .++++...|+..++|.+. +++....+...
T Consensus 288 s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~---~~---~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 288 TDE-GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV---GG---HLSLEYLKDATSEVRVATLKGKPVRTVQLP 360 (695)
T ss_dssp ECT-TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE---TT---EEEEEEEETTEEEEEEEETTCCEEEECCCS
T ss_pred ECC-CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE---CC---EEEEEEEECCEEEEEEEeCCCCeeEEecCC
Confidence 421 1135889999996 431 333333 3457888887 44 788999999988888654 46666766522
Q ss_pred CCCCeEEEEEecCCCEEEE----EcCCCcEEEEEcCCCC
Q psy10778 511 VALPVIAVTYSCDSQHLYA----SNTEGLVIIWESSSHN 545 (556)
Q Consensus 511 h~~~V~~l~~s~dg~~l~s----gs~Dg~V~vwdl~~~~ 545 (556)
....+..+++++++..++. ....+.|++||+.+++
T Consensus 361 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 361 GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 3567788899999977763 2345789999998865
No 194
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.30 E-value=9e-11 Score=120.17 Aligned_cols=207 Identities=12% Similarity=0.024 Sum_probs=133.3
Q ss_pred CCCeEEEEeCCCCCCcceEcCC-----CCCceEEEEEcCCCCEEEEEeC--CCcEEEEEeeeccCcccccccCCCeE-ee
Q psy10778 301 CDNLIRLKMSKELPATPVIRPP-----LGATIATATTAPDCHTLWLGLT--SGNILVYEYELNASTNKIEFCKPPTI-LL 372 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~-----h~~~V~~i~~s~dg~~l~tgs~--Dg~I~vwd~~~~~~~~~~~~~~~~~~-l~ 372 (556)
.++.|.+||..+.+....+... +......++++|||++|+++.. +++|.+||+.++. .+.. +.
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~---------~~~~~i~ 149 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD---------YVEDVTA 149 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE---------EEEEEGG
T ss_pred CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc---------EEEEEec
Confidence 5788999999888776666532 2345678999999999999874 5899999987652 1122 11
Q ss_pred C--------------------CCccEEEEEEccCC---------------------------CEEEEEcCCCcEEEEeCC
Q psy10778 373 G--------------------HSACVTDLYLCAGF---------------------------SVAVSSSEDGTCLLWDIN 405 (556)
Q Consensus 373 ~--------------------h~~~V~~l~~s~~~---------------------------~~l~sgs~Dg~I~iwdl~ 405 (556)
. ..+.+..+.+..++ ..++..+.++.+.++|+.
T Consensus 150 ~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~ 229 (361)
T 2oiz_A 150 AAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFS 229 (361)
T ss_dssp GTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECS
T ss_pred CCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEec
Confidence 0 11111112221111 112222334445555554
Q ss_pred CCe--EEEEeCCCCC---------CCCeeEEEEeCCCCeEEEEee-cCc-----CCCCeEEEEEeC-CcEEEEeecCCCe
Q psy10778 406 TIG--YIREIPCVDP---------NTPVSHVTMSETNGEIASVLQ-TTK-----TGGSILRLHTIN-AQLITSLASELRI 467 (556)
Q Consensus 406 ~~~--~v~~l~~~h~---------~~~V~~l~~sp~~~~i~s~s~-~~~-----~~d~~I~iwdi~-g~~i~~~~~~~~i 467 (556)
... .+..+.. .. ......++++|+++.++++.. ++. ...+.|.+||+. ++.+.++.... +
T Consensus 230 ~~~~~~~~~~~~-~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p 307 (361)
T 2oiz_A 230 GDEVKVDGPWSL-LNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A 307 (361)
T ss_dssp SSSCEEEEEEES-CCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C
T ss_pred CCCceecccccc-cCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e
Confidence 322 1111111 00 011123789999888887652 110 014589999997 78888887666 9
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC--eEEEEecCCCCCCeEEEEEecCCC
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL--AHLLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~--~~~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
.+++|+ |+| ++|++++. +.|.+||..++ +.+.++. .+......++++|+|+
T Consensus 308 ~~ia~s--pdg---~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 308 LSMTID--QQR---NLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEE--TTT---TEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred eEEEEC--CCC---CEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 999999 999 78888886 99999999999 9999985 4567789999999985
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=1.7e-10 Score=128.60 Aligned_cols=201 Identities=7% Similarity=-0.074 Sum_probs=135.0
Q ss_pred CCCCceEEEEEcCCCCEEEE-----EeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC
Q psy10778 322 PLGATIATATTAPDCHTLWL-----GLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED 396 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~t-----gs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D 396 (556)
+|...+.+++|||||++||. |+.+.+|++||+.++... . ...+... ....++|+|||+.|+.++.|
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~------~-~~~~~~~--~~~~~~wspDg~~l~~~~~d 188 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS------K-VDVIEGG--KYATPKWTPDSKGFYYEWLP 188 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC------S-SCCBSCC--TTCCCEECTTSSEEEEEECC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc------C-CcccCcc--cccceEEecCCCEEEEEEec
Confidence 45557899999999999984 344568999999876210 0 0111111 12578999999999999887
Q ss_pred Cc-------------EEEEeCCCCe----EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEE
Q psy10778 397 GT-------------CLLWDINTIG----YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLI 458 (556)
Q Consensus 397 g~-------------I~iwdl~~~~----~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i 458 (556)
.. |++|++.+++ .+..... + ...+..++|+|+|++|+.++.... ....|++++.. ++..
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~-~-~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~ 265 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG-D-PTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFR 265 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC-C-TTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecCC-C-CEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceE
Confidence 76 9999998875 3333333 3 457889999999999988873210 12267777664 4444
Q ss_pred EEeecCCCeEEEEEeeCCCCCcceEEEEEe---CCCeEEEEeCCCCeE---EEEecCCC-CCCeEEEEEecCCCEEEEEc
Q psy10778 459 TSLASELRITSVTFSNAPEGVSQNVIVTGH---SDGTIQLWSGYKLAH---LLTLNTNV-ALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 459 ~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~---~dg~I~iwd~~~~~~---~~~~~~~h-~~~V~~l~~s~dg~~l~sgs 531 (556)
....+...+....+ ++| .+++.+. .++.|.+||+.+++. ...+. .+ ...+.+++++ ++.++++..
T Consensus 266 ~l~~~~~~~~~~~~---~~g---~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA---WKD---RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVP-EDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp EEEECSSCCEEEEE---ETT---EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC-CCSSCEEEEEEEE-TTEEEEEEE
T ss_pred EeecCCCceEEEEe---cCC---cEEEEECCCCCCCEEEEEeCCCCCccCCeEEec-CCCCCeEEEEEEE-CCEEEEEEE
Confidence 43444555555555 466 6333333 258999999977653 33333 23 4568889998 678888899
Q ss_pred CCCcEEEEEcC
Q psy10778 532 TEGLVIIWESS 542 (556)
Q Consensus 532 ~Dg~V~vwdl~ 542 (556)
.||..++|.+.
T Consensus 338 ~dg~~~l~~~~ 348 (695)
T 2bkl_A 338 KDATSEVRVAT 348 (695)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 99988888665
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.29 E-value=9.3e-09 Score=100.76 Aligned_cols=223 Identities=9% Similarity=-0.036 Sum_probs=154.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|..|+.. ++............+.++++.++|+++++...++.|.+|+. .+. .. ......+
T Consensus 70 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~----~~----~~~~~~~ 139 (299)
T 2z2n_A 70 VWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK----IR----EYELPNK 139 (299)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC----EE----EEECSST
T ss_pred EEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC----EE----EecCCCC
Confidence 44445557889999876 33222221124567899999999988888777889999886 320 00 0112234
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEE-eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIRE-IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~-l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...+.++++.+++.+.++...++.|..||. +++.... +.. . ...+..+++++++...++.. .++.|..||.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~-~~~~~~i~~~~~g~l~v~~~-----~~~~i~~~~~ 211 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPT-P-ASGPVGITKGNDDALWFVEI-----IGNKIGRITT 211 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS-T-TCCEEEEEECTTSSEEEEET-----TTTEEEEECT
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCC-C-CCcceeEEECCCCCEEEEcc-----CCceEEEECC
Confidence 567899999999998888888899999999 6665443 333 3 46688999999988666554 5789999999
Q ss_pred CCcEEEEe-e-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec-CCCCCCeEEEEEecCCCEEEEE
Q psy10778 454 NAQLITSL-A-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN-TNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 454 ~g~~i~~~-~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~-~~h~~~V~~l~~s~dg~~l~sg 530 (556)
+++..... . ....+.+++++ ++| ++.++...++.|..||. +++. ..+. ..+...+.++++ +++++.++.
T Consensus 212 ~g~~~~~~~~~~~~~~~~i~~~--~~g---~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 212 SGEITEFKIPTPNARPHAITAG--AGI---DLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEEC--STT---CEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEE
T ss_pred CCcEEEEECCCCCCCceeEEEC--CCC---CEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEe
Confidence 76643321 1 33678999999 888 76666667899999998 5543 3332 134567999999 888877765
Q ss_pred cCCCcEEEEEcCCC
Q psy10778 531 NTEGLVIIWESSSH 544 (556)
Q Consensus 531 s~Dg~V~vwdl~~~ 544 (556)
. .+.+..++.+++
T Consensus 284 ~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 284 E-CDKIGKLTLIKD 296 (299)
T ss_dssp T-TTEEEEEEEC--
T ss_pred c-CCcEEEEEcCcc
Confidence 5 677888887664
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.29 E-value=1.6e-09 Score=112.74 Aligned_cols=225 Identities=10% Similarity=-0.041 Sum_probs=154.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCC--cEEEEEeeeccCcccccccCCCeEe-
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSG--NILVYEYELNASTNKIEFCKPPTIL- 371 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg--~I~vwd~~~~~~~~~~~~~~~~~~l- 371 (556)
++++...++.|++|+.+++........ ..... ++|+++++.|+++..++ .|.+++.... .....+
T Consensus 144 lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~---------~~~~~~g 211 (409)
T 3hrp_A 144 VLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG---------WAPTRIG 211 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT---------TCEEEEE
T ss_pred EEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC---------ceeEEee
Confidence 566666778999999987765555442 22233 89999999999998876 5666665433 111222
Q ss_pred ---eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEE----eCCCCCCCCe--eEEEEeCCCCeEEEEeecCc
Q psy10778 372 ---LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIRE----IPCVDPNTPV--SHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 372 ---~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~----l~~~h~~~~V--~~l~~sp~~~~i~s~s~~~~ 442 (556)
......+.+++++|++..|+.+..++.|..||..++..... ... . ...- ..++++|+++.|..+..
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g-~-~~~~P~~~ia~~p~~g~lyv~d~--- 286 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSG-S-LGTNPGPYLIYYFVDSNFYMSDQ--- 286 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCS-C-CCCSSCCEEEEETTTTEEEEEET---
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccC-C-CCCCccccEEEeCCCCEEEEEeC---
Confidence 21446678899999555555577789999999987653322 222 1 1222 39999997666655542
Q ss_pred CCCCeEEEEEeCCcEEEEeecC---------------CCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeCCCCeEEEE
Q psy10778 443 TGGSILRLHTINAQLITSLASE---------------LRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 443 ~~d~~I~iwdi~g~~i~~~~~~---------------~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~~~~~~~~ 506 (556)
..+.|+.|+.++......... .....++++ ++| +++++-. .++.|+.|++.+++....
T Consensus 287 -~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d--~dG---~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 287 -NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVD--EDG---NFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp -TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC--TTC---CEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred -CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEe--CCC---CEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 678999999987744333221 347899999 899 8888877 899999999877764433
Q ss_pred ecCC-------------CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 507 LNTN-------------VALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 507 ~~~~-------------h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
.... .-....+++++++|.++++...+++|+.++++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 3210 02458999999999888888888999988763
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.26 E-value=6e-10 Score=120.65 Aligned_cols=194 Identities=11% Similarity=-0.013 Sum_probs=148.0
Q ss_pred CCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCC--CCeEEE
Q psy10778 334 PDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDIN--TIGYIR 411 (556)
Q Consensus 334 ~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~--~~~~v~ 411 (556)
+.+..+++...+++|.++|..++ +.+..+... ..+.++.++|+|+++++++.|+.|.+||+. +++.+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~---------~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY---------EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC---------CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCC---------eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE
Confidence 34456677778899999998765 334455433 356789999999999999999999999996 788888
Q ss_pred EeCCCCCCCCeeEEEEe----CCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeec------------CCCeEEEEEee
Q psy10778 412 EIPCVDPNTPVSHVTMS----ETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLAS------------ELRITSVTFSN 474 (556)
Q Consensus 412 ~l~~~h~~~~V~~l~~s----p~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~------------~~~i~~i~~s~ 474 (556)
++.. ......++++ |+|+++++++. .+++|.++|.. .+++..+.. ...+..+..+
T Consensus 235 ~i~~---G~~P~~ia~s~~~~pDGk~l~v~n~----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s- 306 (567)
T 1qks_A 235 EIKI---GSEARSIETSKMEGWEDKYAIAGAY----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS- 306 (567)
T ss_dssp EEEC---CSEEEEEEECCSTTCTTTEEEEEEE----ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-
T ss_pred EEec---CCCCceeEEccccCCCCCEEEEEEc----cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc-
Confidence 8876 4567899999 69999998875 67899999986 677766642 1267788888
Q ss_pred CCCCCcceEEEEEeCCCeEEEEeCCCCeE--EEEecCCCCCCeEEEEEecCCCEEEEEc-CCCcEEEEEcCCCCCcCee
Q psy10778 475 APEGVSQNVIVTGHSDGTIQLWSGYKLAH--LLTLNTNVALPVIAVTYSCDSQHLYASN-TEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 475 ~pdg~~~~~l~tg~~dg~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg~~l~sgs-~Dg~V~vwdl~~~~~~~~~ 550 (556)
+++. .+++....+|.|.++|..+.+. +..+. ......++.|+|+|+++++++ .++.|.++|+.+++.+..+
T Consensus 307 -~~~~--~~vv~~~~~g~v~~vd~~~~~~~~v~~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i 380 (567)
T 1qks_A 307 -HYRP--EFIVNVKETGKILLVDYTDLNNLKTTEIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 380 (567)
T ss_dssp -SSSS--EEEEEETTTTEEEEEETTCSSEEEEEEEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred -CCCC--EEEEEecCCCeEEEEecCCCccceeeeee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE
Confidence 6552 5666667789999999876543 33343 345678899999999887655 5789999999987655443
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.25 E-value=1.7e-10 Score=118.41 Aligned_cols=179 Identities=10% Similarity=-0.002 Sum_probs=134.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcc--cccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTN--KIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~--~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd 403 (556)
.+..+++++...++++|+.+ .+++|++....... .....++.. ...+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 68899999999999999987 45569976542000 000012222 334666 999999 88999998 889999999
Q ss_pred CCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcce
Q psy10778 404 INTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQN 482 (556)
Q Consensus 404 l~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~ 482 (556)
+.+......... + ..++..+.+.+. .++++. .+|.|.+||+. +.... ....|+|++|+ |+|
T Consensus 113 v~sl~~~~~~~~-~-~~~v~~i~~~~p--~~av~~-----~dG~L~v~dl~~~~~~~---~~~~Vs~v~WS--pkG---- 174 (388)
T 1xip_A 113 LEELSEFRTVTS-F-EKPVFQLKNVNN--TLVILN-----SVNDLSALDLRTKSTKQ---LAQNVTSFDVT--NSQ---- 174 (388)
T ss_dssp SSSTTCEEEEEE-C-SSCEEEEEECSS--EEEEEE-----TTSEEEEEETTTCCEEE---EEESEEEEEEC--SSE----
T ss_pred chhhhccCccce-e-ecceeeEEecCC--CEEEEE-----CCCCEEEEEccCCcccc---ccCCceEEEEc--CCc----
Confidence 987765555555 6 677888777654 377777 89999999997 55433 34689999999 886
Q ss_pred EEEEEeCCCeEEEEeCCCCeE--EEEecC--------CCCCCeEEEEEecCCCEEEE
Q psy10778 483 VIVTGHSDGTIQLWSGYKLAH--LLTLNT--------NVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 483 ~l~tg~~dg~I~iwd~~~~~~--~~~~~~--------~h~~~V~~l~~s~dg~~l~s 529 (556)
++.|..||++++|+...++. .+++.. +|...|.++.|.+++.++++
T Consensus 175 -~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 -LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp -EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred -eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 67899999999998876665 556621 36788999999999988886
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.25 E-value=9.1e-09 Score=100.87 Aligned_cols=224 Identities=8% Similarity=-0.091 Sum_probs=157.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|.+++.. ++........+...+.++++.++|+..++...++.|..|+.. +. .. ...+...
T Consensus 33 l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~----~~----~~~~~~~ 102 (300)
T 2qc5_A 33 VWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG----FT----EYPLPQP 102 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC----EE----EEECSST
T ss_pred EEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC----eE----EecCCCC
Confidence 33344457888888877 444332222334678999999999887777667889888865 31 00 0112223
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEE-EeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIR-EIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~-~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...+.++++.+++.+.++...++.|..+|.. ++... .+.. . ...+..++++++++..++.. .++.|..+|.
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~-~-~~~~~~i~~d~~g~l~v~~~-----~~~~i~~~~~ 174 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPN-K-GSYPAFITLGSDNALWFTEN-----QNNSIGRITN 174 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSS-T-TCCEEEEEECTTSSEEEEET-----TTTEEEEECT
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCC-C-CCCceeEEECCCCCEEEEec-----CCCeEEEECC
Confidence 4678999999999988888878899999988 65543 2332 3 46789999999988666554 5788999998
Q ss_pred CCcEEEEe--ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 454 NAQLITSL--ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 454 ~g~~i~~~--~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
+++..... .....+.+++++ ++| ++.++....+.|.+|+. +++............+.+++++++|++.++..
T Consensus 175 ~g~~~~~~~~~~~~~~~~i~~d--~~g---~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 175 TGKLEEYPLPTNAAAPVGITSG--NDG---ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEEC--TTS---SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CCcEEEeeCCCCCCCcceEEEC--CCC---CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 77655422 123568899998 888 77777777789999998 55544432213456789999999999777776
Q ss_pred CCCcEEEEEcC
Q psy10778 532 TEGLVIIWESS 542 (556)
Q Consensus 532 ~Dg~V~vwdl~ 542 (556)
.++.|..|+..
T Consensus 249 ~~~~i~~~~~~ 259 (300)
T 2qc5_A 249 GANQIGRITND 259 (300)
T ss_dssp TTTEEEEECTT
T ss_pred CCCeEEEECCC
Confidence 77899999873
No 201
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.24 E-value=3e-10 Score=114.56 Aligned_cols=205 Identities=8% Similarity=0.010 Sum_probs=135.7
Q ss_pred eEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCC---------------------------CcEEEEEeeec
Q psy10778 304 LIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTS---------------------------GNILVYEYELN 356 (556)
Q Consensus 304 ~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~D---------------------------g~I~vwd~~~~ 356 (556)
.|.+|++.+++...... +.. +.+++|+|||+.|+.++.+ ..|.+|++.++
T Consensus 86 ~l~~~~~~~g~~~~l~~--~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 86 EIWVADLETLSSKKILE--AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEETTTTEEEEEEE--ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred eEEEEECCCCceEEEEc--CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 47778888776555443 223 9999999999999888642 46777877654
Q ss_pred cCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC-------cEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC
Q psy10778 357 ASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG-------TCLLWDINTIGYIREIPCVDPNTPVSHVTMSE 429 (556)
Q Consensus 357 ~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg-------~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp 429 (556)
+.+..+.. . .+..++|+|+| ++++++.++ ...+|.+.+++ .+.+.. ...+.. ++|
T Consensus 163 ---------~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~---~~~~~~--~sp 224 (347)
T 2gop_A 163 ---------EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFE---KVSFYA--VDS 224 (347)
T ss_dssp ---------EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEE---EESEEE--EEE
T ss_pred ---------eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEecc---Ccceee--ECC
Confidence 11123333 3 77889999999 888776542 34555444444 444443 223333 499
Q ss_pred CCCeEEEEeecCc---CCCCeEEEEEeCCcEEEEee-cCCCeEE-EEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEE
Q psy10778 430 TNGEIASVLQTTK---TGGSILRLHTINAQLITSLA-SELRITS-VTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHL 504 (556)
Q Consensus 430 ~~~~i~s~s~~~~---~~d~~I~iwdi~g~~i~~~~-~~~~i~~-i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~ 504 (556)
+|+.|+.++.... .....|.+|| .++...... +...+.. +.|+ + .++++++.++.+++| +.+++..
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s---d----g~~~~~~~~~~~~l~-~~~g~~~ 295 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD---G----KVYFTLFEEGSVNLY-IWDGEIK 295 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET---T----EEEEEEEETTEEEEE-EESSSEE
T ss_pred CCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc---C----cEEEEEecCCcEEEE-EcCCceE
Confidence 9999988773210 0135788888 666544333 3456665 7775 3 378888999999999 8766654
Q ss_pred EEecCCCCCCeEEEEEecCCCEEEEEcCCCcE-EEEEcC
Q psy10778 505 LTLNTNVALPVIAVTYSCDSQHLYASNTEGLV-IIWESS 542 (556)
Q Consensus 505 ~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V-~vwdl~ 542 (556)
.... +...|.+++|++ .++++++.++.. .+|.+.
T Consensus 296 ~~~~--~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 296 PIAK--GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEC--SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEec--CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 4443 467899999999 677777777765 778776
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.23 E-value=7.8e-10 Score=107.23 Aligned_cols=196 Identities=7% Similarity=-0.025 Sum_probs=138.5
Q ss_pred ceEEEEEcCCCCEEE-EEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10778 326 TIATATTAPDCHTLW-LGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI 404 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~-tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl 404 (556)
...+++++++|+.++ +.+.++.|.+|+..... .......+...+.+++++++++++++.. ++.|.+||.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG---------TTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAA 94 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC--------------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc---------cceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeC
Confidence 678999999998776 44678899999865431 1011123335678899999999777766 889999998
Q ss_pred CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc-EEEEe-ecCCCeEEEEEeeCCCCCcce
Q psy10778 405 NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ-LITSL-ASELRITSVTFSNAPEGVSQN 482 (556)
Q Consensus 405 ~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~-~i~~~-~~~~~i~~i~~s~~pdg~~~~ 482 (556)
.... ...+.... ...+..+++++++..+++.. .++.|.+|+.... ..... .....+.+++++ ++| +
T Consensus 95 ~~~~-~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~--~~g---~ 162 (270)
T 1rwi_B 95 GSNN-QTVLPFDG-LNYPEGLAVDTQGAVYVADR-----GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD--NSG---N 162 (270)
T ss_dssp TCSC-CEECCCCS-CSSEEEEEECTTCCEEEEEG-----GGTEEEEECTTCCSCEECCCCSCCSCCCEEEC--TTC---C
T ss_pred CCce-EeeeecCC-cCCCcceEECCCCCEEEEEC-----CCCEEEEEECCCceeEeeccccCCCceeEEEe--CCC---C
Confidence 7654 33343202 36789999999988666655 5788999976532 22111 223467889999 888 7
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 483 VIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 483 ~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
++++...++.|.+||........... .+...+.+++++++|.++++...++.|.+|+..+.
T Consensus 163 l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 163 VYVTDTDNNRVVKLEAESNNQVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EEEEEGGGTEEEEECTTTCCEEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred EEEEECCCCEEEEEecCCCceEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 77777778999999987665444332 33367899999999988888878899999998764
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=4.1e-09 Score=104.46 Aligned_cols=213 Identities=7% Similarity=-0.026 Sum_probs=144.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee--
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL-- 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-- 372 (556)
++.+...++.|..|+..+++.. .+ .....+.+++++++|+++++ . ++.|.+||..++. . +.+....
T Consensus 27 l~~~d~~~~~i~~~d~~~~~~~-~~--~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~----~---~~~~~~~~~ 94 (297)
T 3g4e_A 27 LLFVDIPAKKVCRWDSFTKQVQ-RV--TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS----A---VVLATVDND 94 (297)
T ss_dssp EEEEETTTTEEEEEETTTCCEE-EE--ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE----E---EEEEECCTT
T ss_pred EEEEECCCCEEEEEECCCCcEE-EE--eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc----E---EEEEecCCC
Confidence 5666677899999999876542 23 24567999999999995544 4 5678888876431 0 0011111
Q ss_pred CCCccEEEEEEccCCCEEEEEcC---------CCcEEEEeCCC-CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSE---------DGTCLLWDINT-IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~---------Dg~I~iwdl~~-~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
.....+.+++++++|++.++... ...-.+|.+.. ++....... ......++|+|+++.++.+..
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~---~~~pngi~~spdg~~lyv~~~--- 168 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ---VDISNGLDWSLDHKIFYYIDS--- 168 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE---ESBEEEEEECTTSCEEEEEEG---
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec---cccccceEEcCCCCEEEEecC---
Confidence 12345889999999997765432 12334444432 343333332 355789999999987766542
Q ss_pred CCCCeEEEEEeC---CcEE-----EEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCC
Q psy10778 443 TGGSILRLHTIN---AQLI-----TSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVAL 513 (556)
Q Consensus 443 ~~d~~I~iwdi~---g~~i-----~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~ 513 (556)
.++.|.+|+++ |.+. ..+. .......++++ ++| ++.++...++.|..||..+++.+..+. .+..
T Consensus 169 -~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d--~~G---~lwva~~~~~~v~~~d~~tG~~~~~i~-~p~~ 241 (297)
T 3g4e_A 169 -LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID--AEG---KLWVACYNGGRVIRLDPVTGKRLQTVK-LPVD 241 (297)
T ss_dssp -GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB--TTS---CEEEEEETTTEEEEECTTTCCEEEEEE-CSSS
T ss_pred -CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC--CCC---CEEEEEcCCCEEEEEcCCCceEEEEEE-CCCC
Confidence 57899999973 4432 1221 23567889998 889 788888888999999998899998887 4557
Q ss_pred CeEEEEEe-cCCCEEEEEcC
Q psy10778 514 PVIAVTYS-CDSQHLYASNT 532 (556)
Q Consensus 514 ~V~~l~~s-~dg~~l~sgs~ 532 (556)
.+++++|. |+++.|+.++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 89999999 88877665543
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.18 E-value=6.7e-10 Score=124.72 Aligned_cols=223 Identities=7% Similarity=-0.028 Sum_probs=147.7
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCc--------------EEEEEeeeccCcccccccCCC
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGN--------------ILVYEYELNASTNKIEFCKPP 368 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~--------------I~vwd~~~~~~~~~~~~~~~~ 368 (556)
..|++||+.+++...... +...+..++|+|| +.|+.++.++. |++|++.++... ..
T Consensus 189 ~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-------~~ 258 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA-------DQ 258 (741)
T ss_dssp EEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG-------CE
T ss_pred EEEEEEECCCCCCCCccC--CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh-------CE
Confidence 469999999887654321 1122357899999 99998887654 777777544110 11
Q ss_pred eEee--CCCccEEEEEEccCCCEEEEEcCCC-----cEEEEeCCCC--eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 369 TILL--GHSACVTDLYLCAGFSVAVSSSEDG-----TCLLWDINTI--GYIREIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 369 ~~l~--~h~~~V~~l~~s~~~~~l~sgs~Dg-----~I~iwdl~~~--~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
.... .+...+..+.|+|+|++|+..+.++ .|.+||+.++ +..+.+.. + ...+... ++|+++.|+..+.
T Consensus 259 lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~-~-~~~~~~~-~~~dg~~l~~~s~ 335 (741)
T 1yr2_A 259 PVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP-D-LKAQWDF-VDGVGDQLWFVSG 335 (741)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-S-SSSCEEE-EEEETTEEEEEEC
T ss_pred EEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-C-CCceEEE-EeccCCEEEEEEC
Confidence 2222 3334588999999999888776543 8999999876 31445544 3 4444444 4588999988874
Q ss_pred cCcCCCCeEEEEEeCC--cEEEEe-ec-CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-CCeEEEEecCCCCCC
Q psy10778 440 TTKTGGSILRLHTINA--QLITSL-AS-ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-KLAHLLTLNTNVALP 514 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~g--~~i~~~-~~-~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-~~~~~~~~~~~h~~~ 514 (556)
.. ...+.|.+||+++ .....+ .+ ...+.+++++ ++ .++++...|+..+||.+. +++....+.......
T Consensus 336 ~~-~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~---~~---~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~ 408 (741)
T 1yr2_A 336 DG-APLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA---GN---RLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGS 408 (741)
T ss_dssp TT-CTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE---BT---EEEEEEEETTEEEEEEEETTSCEEEECBCSSSCE
T ss_pred CC-CCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE---CC---EEEEEEEECCEEEEEEEeCCCCceeeccCCCCeE
Confidence 21 1356799999974 233333 33 3446667776 34 688888899987777553 566677776323567
Q ss_pred eEEEEEecCCCEEEE----EcCCCcEEEEEcCCCC
Q psy10778 515 VIAVTYSCDSQHLYA----SNTEGLVIIWESSSHN 545 (556)
Q Consensus 515 V~~l~~s~dg~~l~s----gs~Dg~V~vwdl~~~~ 545 (556)
+..+.+++++..|+. ....+.|++||+.+++
T Consensus 409 v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 409 ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 889999999876552 2345899999998754
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.18 E-value=5.1e-08 Score=95.45 Aligned_cols=221 Identities=11% Similarity=-0.018 Sum_probs=152.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|..++.. ++............+.++++.++|+++++...++.|..++.. +. .. ...+...
T Consensus 75 l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~----~~----~~~~~~~ 144 (300)
T 2qc5_A 75 IWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT----IY----EYDLPNK 144 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC----EE----EEECSST
T ss_pred EEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC----EE----EccCCCC
Confidence 44444557889999887 544322222244678999999999888877767888888765 21 00 0112234
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEE-eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIRE-IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~-l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
...+.++++.+++++.++...++.|..+|. +++.... ... + ...+..+++++++...++.. ..+.|.+||.
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-~-~~~~~~i~~d~~g~l~v~~~-----~~~~i~~~~~ 216 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPT-N-AAAPVGITSGNDGALWFVEI-----MGNKIGRITT 216 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSS-T-TCCEEEEEECTTSSEEEEET-----TTTEEEEECT
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCC-C-CCCcceEEECCCCCEEEEcc-----CCCEEEEEcC
Confidence 567899999999998777777889999998 5554432 223 3 45789999999887666554 5678999999
Q ss_pred CCcEEEEe--ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE-ecCCCCCCeEEEEEecCCCEEEEE
Q psy10778 454 NAQLITSL--ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT-LNTNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 454 ~g~~i~~~--~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~-~~~~h~~~V~~l~~s~dg~~l~sg 530 (556)
+++..... .....+.+++++ ++| ++.++...++.|..+|. +++.... +. .....+.+++++++|++.++.
T Consensus 217 ~g~~~~~~~~~~~~~~~~i~~d--~~g---~l~v~~~~~~~i~~~~~-~g~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 217 TGEISEYDIPTPNARPHAITAG--KNS---EIWFTEWGANQIGRITN-DNTIQEYQLQ-TENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEEC--STT---CEEEEETTTTEEEEECT-TSCEEEEECC-STTCCCCCEEECTTSCEEEEC
T ss_pred CCcEEEEECCCCCCCceEEEEC--CCC---CEEEeccCCCeEEEECC-CCcEEEEECC-ccCCccceeEeCCCCCEEEEc
Confidence 76655432 134678899999 888 77776667799999998 5544322 22 234668899999999866655
Q ss_pred cCCCcEEEEEcC
Q psy10778 531 NTEGLVIIWESS 542 (556)
Q Consensus 531 s~Dg~V~vwdl~ 542 (556)
. + .|..++.+
T Consensus 290 ~-~-~i~~~~p~ 299 (300)
T 2qc5_A 290 K-C-KIGKLNLN 299 (300)
T ss_dssp S-S-EEEEEEEC
T ss_pred c-C-ceEEeCCC
Confidence 4 5 77777754
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=4.4e-10 Score=115.29 Aligned_cols=160 Identities=10% Similarity=0.012 Sum_probs=118.5
Q ss_pred ceEEeccCCCeEEEEeCCCCC---------CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccc
Q psy10778 294 GMICWNECDNLIRLKMSKELP---------ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~---------~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~ 364 (556)
++++.|+.++ +++|++++.. ........+.+ |++++| |+++|+++ .++.|++||+...
T Consensus 50 gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl-------- 116 (388)
T 1xip_A 50 SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEEL-------- 116 (388)
T ss_dssp TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSST--------
T ss_pred CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhh--------
Confidence 3677777764 4458764322 22212224556 999999 89999999 8899999998765
Q ss_pred cCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 365 CKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 365 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
........|..++.++.+.+. .+++++.||.+.+||+.++.... + ...|++++|||+| ++.+. .
T Consensus 117 -~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~-----~~~Vs~v~WSpkG--~~vg~-----~ 180 (388)
T 1xip_A 117 -SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L-----AQNVTSFDVTNSQ--LAVLL-----K 180 (388)
T ss_dssp -TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E-----EESEEEEEECSSE--EEEEE-----T
T ss_pred -hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c-----cCCceEEEEcCCc--eEEEE-----c
Confidence 222455677788888887765 38888999999999999877643 2 3569999999998 67777 8
Q ss_pred CCeEEEEEeCCcE---EEEe------e----cCCCeEEEEEeeCCCCCcceEEEEE
Q psy10778 445 GSILRLHTINAQL---ITSL------A----SELRITSVTFSNAPEGVSQNVIVTG 487 (556)
Q Consensus 445 d~~I~iwdi~g~~---i~~~------~----~~~~i~~i~~s~~pdg~~~~~l~tg 487 (556)
+|++++|+.++.. ..++ . +...|.+++|. +++ .++++-
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl--~~~---~flv~y 231 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL--SPQ---DFLAVF 231 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES--SSS---EEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe--cCC---eEEEEE
Confidence 9999999998655 4455 2 46789999999 777 677763
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=1.4e-09 Score=112.98 Aligned_cols=227 Identities=8% Similarity=-0.050 Sum_probs=152.4
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe----------CCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL----------TSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+.|.++|..+.+.+..+..+.. + .++++|||++++++. .++.|.++|..+. +.+..+.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~---------~vv~~I~ 166 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF---------LPIADIE 166 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---------CEEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC---------cEEEEEE
Confidence 7999999999988888875543 3 899999999988876 4678999998765 3333332
Q ss_pred CC-------CccEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCC-------CeeEEEEeCCCCeEEE
Q psy10778 373 GH-------SACVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIREIPCVDPNT-------PVSHVTMSETNGEIAS 436 (556)
Q Consensus 373 ~h-------~~~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~l~~~h~~~-------~V~~l~~sp~~~~i~s 436 (556)
-. ......++++|+|++++.+.. +++|.+.|+.+++.+.++.. . .. .-..++++++|..++.
T Consensus 167 v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v-~-g~~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 167 LPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV-P-DCYHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp ETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC-C-SEEEEEEEETTEEEEEETTSSEEEE
T ss_pred CCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc-C-CceeeccCCCcEEEEEcCCCCEEEE
Confidence 11 123456899999999888764 58899999999998887765 2 11 1112444555544433
Q ss_pred EeecC--------------------------------cCCCCeEEEEEeCCcEEEEe---ec-----------CCCeEEE
Q psy10778 437 VLQTT--------------------------------KTGGSILRLHTINAQLITSL---AS-----------ELRITSV 470 (556)
Q Consensus 437 ~s~~~--------------------------------~~~d~~I~iwdi~g~~i~~~---~~-----------~~~i~~i 470 (556)
..... ....+.|.+.|..+..+... .. ......+
T Consensus 245 ~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v 324 (426)
T 3c75_H 245 DFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQT 324 (426)
T ss_dssp ECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCE
T ss_pred ECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceee
Confidence 32000 00334566666643221111 10 1112236
Q ss_pred EEeeCCCCCcceEEEEEeC----------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC-EEEEEc-CCCcEEE
Q psy10778 471 TFSNAPEGVSQNVIVTGHS----------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ-HLYASN-TEGLVII 538 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~----------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~sgs-~Dg~V~v 538 (556)
+++ +++ +.+++... ++.|.+.|..+++.+.++..+ ....+++|+|||+ ++++.. .++.|.|
T Consensus 325 a~s--~dg---~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 325 AYH--RQS---DRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp EEE--GGG---TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred EEc--CCC---CEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 788 776 44444431 357999999999999999742 4588999999999 888887 5899999
Q ss_pred EEcCCCCCcCee
Q psy10778 539 WESSSHNRTPKF 550 (556)
Q Consensus 539 wdl~~~~~~~~~ 550 (556)
+|+.+.+.+.++
T Consensus 398 ID~~t~kvv~tI 409 (426)
T 3c75_H 398 YDAATGEELRSV 409 (426)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCCEEEEe
Confidence 999998877665
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=3.8e-09 Score=118.54 Aligned_cols=201 Identities=7% Similarity=-0.084 Sum_probs=130.2
Q ss_pred CCCceEEEEEcCCCCEEEEEeCC-----CcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC
Q psy10778 323 LGATIATATTAPDCHTLWLGLTS-----GNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG 397 (556)
Q Consensus 323 h~~~V~~i~~s~dg~~l~tgs~D-----g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg 397 (556)
|...+..++|||||++||.++.+ .+|++||+.++ +.+. ...+...+..++|+|| +.|+.++.++
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg---------~~~~-~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG---------KPLA-DELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC---------CEEE-EEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---------CCCC-ccCCCceeccEEEECC-CEEEEEEecC
Confidence 43468899999999999987654 46999998876 1111 1111222357899999 9888877665
Q ss_pred c--------------EEEEeCCCCeE--EEEeCCC-CCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc--E-
Q psy10778 398 T--------------CLLWDINTIGY--IREIPCV-DPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ--L- 457 (556)
Q Consensus 398 ~--------------I~iwdl~~~~~--v~~l~~~-h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~--~- 457 (556)
. |.+|++.++.. ...+... + ...+..+.|+|||++|+..+....+....|++||+++. .
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 4 88999987652 2233320 2 23588999999999998887432112458999999743 2
Q ss_pred EEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeC----CCeEEEEeCCCC-eEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 458 ITSL-ASELRITSVTFSNAPEGVSQNVIVTGHS----DGTIQLWSGYKL-AHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 458 i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~----dg~I~iwd~~~~-~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
...+ ......... ++ ++| +.|+..+. ++.|.+||+.++ .....+...+...+.+++++ ++.++++..
T Consensus 309 ~~~l~~~~~~~~~~-~~--~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 309 VTALIPDLKAQWDF-VD--GVG---DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI 381 (741)
T ss_dssp CEEEECSSSSCEEE-EE--EET---TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE
T ss_pred cEEecCCCCceEEE-Ee--ccC---CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE
Confidence 3333 334444444 34 566 55665554 456999998774 23333333455567788888 567788888
Q ss_pred CCCcEEEEEcC
Q psy10778 532 TEGLVIIWESS 542 (556)
Q Consensus 532 ~Dg~V~vwdl~ 542 (556)
.||..++|.+.
T Consensus 382 ~dg~~~l~~~~ 392 (741)
T 1yr2_A 382 HDAKSQVLAFD 392 (741)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 89987777654
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=4.1e-08 Score=98.67 Aligned_cols=207 Identities=8% Similarity=0.005 Sum_probs=139.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeC-
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLG- 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~- 373 (556)
++.++..++.|..|+..+++... +. ....+.+++++++|+++++. .+ .|.+||..++. ...+..
T Consensus 63 l~~~d~~~~~i~~~d~~~~~~~~-~~--~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~----------~~~~~~~ 127 (326)
T 2ghs_A 63 AWWFNILERELHELHLASGRKTV-HA--LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGV----------LTLHAEL 127 (326)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEE-EE--CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC----------EEEEECS
T ss_pred EEEEECCCCEEEEEECCCCcEEE-EE--CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc----------EEEEeeC
Confidence 55556677899999988764332 22 34579999999998877654 44 48888865441 111211
Q ss_pred ----CCccEEEEEEccCCCEEEEEcC------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC
Q psy10778 374 ----HSACVTDLYLCAGFSVAVSSSE------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT 443 (556)
Q Consensus 374 ----h~~~V~~l~~s~~~~~l~sgs~------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~ 443 (556)
....+.+++++++|++.++... .+.|..++ +++....... ......++|+|+++.++.+..
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~---~~~~~~i~~s~dg~~lyv~~~---- 198 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD---ISIPNSICFSPDGTTGYFVDT---- 198 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE---ESSEEEEEECTTSCEEEEEET----
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC---CcccCCeEEcCCCCEEEEEEC----
Confidence 1246889999999997766542 24566666 4554333222 355789999999987766642
Q ss_pred CCCeEEEEEeC---C-c-----EEEEee-cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCC
Q psy10778 444 GGSILRLHTIN---A-Q-----LITSLA-SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVAL 513 (556)
Q Consensus 444 ~d~~I~iwdi~---g-~-----~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~ 513 (556)
.++.|.+||++ | . .+..+. ....+..++++ ++| ++.++...++.|..||. +++.+..+. .+..
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d--~~G---~lwva~~~~~~v~~~d~-~g~~~~~i~-~~~~ 271 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD--AEG---HIWNARWGEGAVDRYDT-DGNHIARYE-VPGK 271 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC--TTS---CEEEEEETTTEEEEECT-TCCEEEEEE-CSCS
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC--CCC---CEEEEEeCCCEEEEECC-CCCEEEEEE-CCCC
Confidence 56899999984 4 2 122221 23456788888 888 77777767789999998 677777776 4456
Q ss_pred CeEEEEEe-cCCCEEEEEcC
Q psy10778 514 PVIAVTYS-CDSQHLYASNT 532 (556)
Q Consensus 514 ~V~~l~~s-~dg~~l~sgs~ 532 (556)
.+++++|+ ++++.|++++.
T Consensus 272 ~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 272 QTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp BEEEEEEESTTSCEEEEEEB
T ss_pred CcEEEEEecCCCCEEEEEec
Confidence 79999999 88877765543
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.09 E-value=1.3e-08 Score=100.81 Aligned_cols=203 Identities=8% Similarity=-0.009 Sum_probs=137.2
Q ss_pred CCceEEEEEcCCCCEEEE-------EeCCCcEEEEEeeeccCcccccccCCCeEee-----CCCccEEEEEEccC-CCEE
Q psy10778 324 GATIATATTAPDCHTLWL-------GLTSGNILVYEYELNASTNKIEFCKPPTILL-----GHSACVTDLYLCAG-FSVA 390 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~t-------gs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-----~h~~~V~~l~~s~~-~~~l 390 (556)
.....+++|+++|+.+++ +..++.|.+|+..++. ...+. ++...+.+++++++ ++++
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~----------~~~~~~~~~~~~~~~~~~i~~~~~~g~l~ 86 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK----------KTVICKPEVNGYGGIPAGCQCDRDANQLF 86 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC----------EEEEECCEETTEECCEEEEEECSSSSEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc----------EEEEEecccCCCCCCCceEEEecCCCcEE
Confidence 345689999999988877 5778899999865441 11121 25567899999999 7666
Q ss_pred EEEcCCCcEEEEeCCCCeEEEE-eCCC--CCCCCeeEEEEeCCCCeEEEEeecCcCCC---------------CeEEEEE
Q psy10778 391 VSSSEDGTCLLWDINTIGYIRE-IPCV--DPNTPVSHVTMSETNGEIASVLQTTKTGG---------------SILRLHT 452 (556)
Q Consensus 391 ~sgs~Dg~I~iwdl~~~~~v~~-l~~~--h~~~~V~~l~~sp~~~~i~s~s~~~~~~d---------------~~I~iwd 452 (556)
++.. .+.|.+||.. ++.... .... .....+..+++++++..+++.. .+ +.|..++
T Consensus 87 v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~-----~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 87 VADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP-----AGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp EEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC-----BCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred EEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec-----CcccccccccccccCCCCeEEEEC
Confidence 6554 4478999998 765433 2210 1023588999999987776654 22 5677777
Q ss_pred eCCcEEEEeecCCCeEEEEEe--eCCCCCcceEEE-EEeCCCeEEEEeCC-CCe-----EEEEecCCCC-CCeEEEEEec
Q psy10778 453 INAQLITSLASELRITSVTFS--NAPEGVSQNVIV-TGHSDGTIQLWSGY-KLA-----HLLTLNTNVA-LPVIAVTYSC 522 (556)
Q Consensus 453 i~g~~i~~~~~~~~i~~i~~s--~~pdg~~~~~l~-tg~~dg~I~iwd~~-~~~-----~~~~~~~~h~-~~V~~l~~s~ 522 (556)
.+++.............++++ .++++ +.|+ +...++.|.+||.. +++ ....+. .+. ..+..+++++
T Consensus 160 ~~g~~~~~~~~~~~~~~i~~~~~~d~dg---~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 160 TDGQMIQVDTAFQFPNGIAVRHMNDGRP---YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-GTHEGGADGMDFDE 235 (314)
T ss_dssp TTSCEEEEEEEESSEEEEEEEECTTSCE---EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-CCSSCEEEEEEEBT
T ss_pred CCCCEEEeccCCCCcceEEEecccCCCC---CEEEEEECCCCeEEEEECCCCCccccceEEEECC-CCCCCCCCceEECC
Confidence 766655444444566788887 22455 4554 44567899999975 443 222333 333 5688999999
Q ss_pred CCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 523 DSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 523 dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
+|+++++...++.|.+||..+++..
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~ 260 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPK 260 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCS
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEe
Confidence 9998888878899999998865543
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.06 E-value=4.3e-08 Score=97.00 Aligned_cols=207 Identities=7% Similarity=-0.012 Sum_probs=137.0
Q ss_pred CceEEEEEcCCC-CEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10778 325 ATIATATTAPDC-HTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 325 ~~V~~i~~s~dg-~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd 403 (556)
.---+..|++++ ..+++...++.|..|+..++ + ... ......+.+++++++++++++. ++.|.+||
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~---------~-~~~-~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK---------Q-VQR-VTMDAPVSSVALRQSGGYVATI--GTKFCALN 79 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------C-EEE-EECSSCEEEEEEBTTSSEEEEE--TTEEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCC---------c-EEE-EeCCCceEEEEECCCCCEEEEE--CCeEEEEE
Confidence 344578899854 45666667889999997654 1 122 2345679999999999966554 56799999
Q ss_pred CCCCeEEEEeCCC--CCCCCeeEEEEeCCCCeEEEEeecCc------CCCCeEEEEEeCCcEEEEeecCCCeEEEEEeeC
Q psy10778 404 INTIGYIREIPCV--DPNTPVSHVTMSETNGEIASVLQTTK------TGGSILRLHTINAQLITSLASELRITSVTFSNA 475 (556)
Q Consensus 404 l~~~~~v~~l~~~--h~~~~V~~l~~sp~~~~i~s~s~~~~------~~d~~I~iwdi~g~~i~~~~~~~~i~~i~~s~~ 475 (556)
..+++........ .....+..++++|+|+.+++...... ...+.|..++.+++...........+.++|+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~s-- 157 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWS-- 157 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEEC--
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEc--
Confidence 9887654332210 00235788999999986665431100 0123455555556655444445667899999
Q ss_pred CCCCcceEE-EEEeCCCeEEEEeC--CCCeE-----EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 476 PEGVSQNVI-VTGHSDGTIQLWSG--YKLAH-----LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 476 pdg~~~~~l-~tg~~dg~I~iwd~--~~~~~-----~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
|++ +.| ++.+.++.|.+|++ .++.. +..+. .+...+..++++++|++.++...++.|.+||..+++.+
T Consensus 158 pdg---~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 158 LDH---KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp TTS---CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred CCC---CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 888 555 55666889999986 45543 22222 23356889999999988888878889999999876654
Q ss_pred Cee
Q psy10778 548 PKF 550 (556)
Q Consensus 548 ~~~ 550 (556)
..+
T Consensus 234 ~~i 236 (297)
T 3g4e_A 234 QTV 236 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.03 E-value=2.5e-08 Score=103.73 Aligned_cols=196 Identities=9% Similarity=-0.065 Sum_probs=137.9
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC--cEEE
Q psy10778 324 GATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG--TCLL 401 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg--~I~i 401 (556)
......++++++++++++...++.|++||...+ ........ ..... ++|+++++.|++++.++ .|.+
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g---------~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~ 198 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN---------KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYV 198 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTT---------EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCC---------EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEE
Confidence 346789999999987777777899999998754 11122222 22233 99999999998888766 7888
Q ss_pred EeCCCCeEEEEe----CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEe----e-cC-CCe-E-E
Q psy10778 402 WDINTIGYIREI----PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSL----A-SE-LRI-T-S 469 (556)
Q Consensus 402 wdl~~~~~v~~l----~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~----~-~~-~~i-~-~ 469 (556)
++...+...+.+ .. . ...+.+++++|+++.|+++. .++.|+.||.++.....+ . .. ..- . .
T Consensus 199 ~d~~~~~~~~~~g~~~~~-~-~~~p~~iav~p~~g~lyv~d-----~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGST-F-SGKIGAVALDETEEWLYFVD-----SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp EEGGGTTCEEEEEECCTT-S-CSCCCBCEECTTSSEEEEEC-----TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred EEcCCCceeEEeeeccch-h-cCCcEEEEEeCCCCeEEEEE-----CCCcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 988765544444 31 2 46678999999767777765 678999999974333333 1 11 111 3 9
Q ss_pred EEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC---------------CCCeEEEEEecCCCEEEEEc-C
Q psy10778 470 VTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV---------------ALPVIAVTYSCDSQHLYASN-T 532 (556)
Q Consensus 470 i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h---------------~~~V~~l~~s~dg~~l~sgs-~ 532 (556)
++|+ | ++ .++++...++.|+.|+.. ++ +..+. ++ -.....++++++|+++++-+ .
T Consensus 272 ia~~--p~~g---~lyv~d~~~~~I~~~~~~-g~-~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 272 LIYY--FVDS---NFYMSDQNLSSVYKITPD-GE-CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp EEEE--TTTT---EEEEEETTTTEEEEECTT-CC-EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred EEEe--CCCC---EEEEEeCCCCEEEEEecC-CC-EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 9999 7 46 777777788999999974 33 22332 12 14588999999999888877 8
Q ss_pred CCcEEEEEcCCCC
Q psy10778 533 EGLVIIWESSSHN 545 (556)
Q Consensus 533 Dg~V~vwdl~~~~ 545 (556)
+++|+.|++.++.
T Consensus 344 ~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 344 GYCLRKLDILDGY 356 (409)
T ss_dssp TCEEEEEETTTTE
T ss_pred CCEEEEEECCCCE
Confidence 8999999976654
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=3.1e-08 Score=98.45 Aligned_cols=217 Identities=8% Similarity=-0.004 Sum_probs=142.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee--
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL-- 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-- 372 (556)
++.++..++.|..|+.. ++. ..+. .+...+..++++++|+++++...++.|.+|+.+ +. ...+.
T Consensus 59 l~~~d~~~~~i~~~~~~-g~~-~~~~-~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~----------~~~~~~~ 124 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRED-GTV-DVLL-DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ----------AHLLVGR 124 (305)
T ss_dssp EEEEETTTTEEEEEETT-SCE-EEEE-ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC----------EEEEECE
T ss_pred EEEEECCCCEEEEEeCC-CCE-EEEe-CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC----------EEEEEec
Confidence 56667778899999873 443 2332 345678999999999977666666788888864 21 11111
Q ss_pred --CC-CccEEEEEEccCCCEEEE----EcC-------------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCC
Q psy10778 373 --GH-SACVTDLYLCAGFSVAVS----SSE-------------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNG 432 (556)
Q Consensus 373 --~h-~~~V~~l~~s~~~~~l~s----gs~-------------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~ 432 (556)
+. ...+.+++++++|++.++ |.. .+.|..+|..+++..... . ......++|+|+++
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~---~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D---LDHPNGLAFSPDEQ 200 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E---ESSEEEEEECTTSS
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c---CCCCcceEEcCCCC
Confidence 11 134678999999998886 332 256788887666544433 4 34578899999999
Q ss_pred eEEEEeecC-cCCCCeEEEEEeCCcEEEEe---e--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 433 EIASVLQTT-KTGGSILRLHTINAQLITSL---A--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 433 ~i~s~s~~~-~~~d~~I~iwdi~g~~i~~~---~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
.++.+.... ....+.|.+|++++..+... . .......++++ ++| + |.+++.+ .|.+|+. +++.+..
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d--~~G---~-lwv~~~~-gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD--RGG---W-LWSSSGT-GVCVFDS-DGQLLGH 272 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC--TTS---C-EEECCSS-EEEEECT-TSCEEEE
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC--CCC---C-EEEecCC-cEEEECC-CCCEEEE
Confidence 887775200 00027899999873322211 1 13445678888 888 6 4444444 5999997 6788877
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEE
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWE 540 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwd 540 (556)
+.. . ..+.+++|+++++.|+.++.++ +..++
T Consensus 273 ~~~-~-~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 273 IPT-P-GTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEC-S-SCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEC-C-CceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 763 3 3688999999998888887764 44333
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.02 E-value=9e-09 Score=105.23 Aligned_cols=226 Identities=12% Similarity=0.023 Sum_probs=150.3
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCC------CCceEEEEEcCCCCEEEEEeC--CCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPL------GATIATATTAPDCHTLWLGLT--SGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h------~~~V~~i~~s~dg~~l~tgs~--Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
..++.|.+||..+.+....+..+. ...-..++++|||++++++.. ++.|.++|..++ +.+.++
T Consensus 106 ~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~---------~vv~tI 176 (386)
T 3sjl_D 106 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK---------AFKRML 176 (386)
T ss_dssp EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT---------EEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC---------cEEEEE
Confidence 357899999999988777765432 123557899999999998864 689999999876 333444
Q ss_pred eCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC-CeEEEEeCCCC---CCCCee-EEEEe-CCCCeEEEEeecCcCCC
Q psy10778 372 LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT-IGYIREIPCVD---PNTPVS-HVTMS-ETNGEIASVLQTTKTGG 445 (556)
Q Consensus 372 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~-~~~v~~l~~~h---~~~~V~-~l~~s-p~~~~i~s~s~~~~~~d 445 (556)
.-.. . ...+....+.+++.+.||.+.+.++.+ ++...+... . ...++. ..+|. ++| .++..+ .+
T Consensus 177 ~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~-~~~~~~~~~~~~~~~~~~dG-~~~~vs-----~~ 246 (386)
T 3sjl_D 177 DVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE-VFHPEDEFLINHPAYSQKAG-RLVWPT-----YT 246 (386)
T ss_dssp ECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC-CCSCTTSCBCSCCEEETTTT-EEEEEB-----TT
T ss_pred ECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc-eeccccccccccceeEcCCC-cEEEEe-----CC
Confidence 3211 1 122333445777888899998888876 554332211 1 012222 24665 455 444455 68
Q ss_pred CeEEEEEeCCc---EEEEee-----------cCCCeEEEEEeeCCCCCcceEEEEEeC----------CCeEEEEeCCCC
Q psy10778 446 SILRLHTINAQ---LITSLA-----------SELRITSVTFSNAPEGVSQNVIVTGHS----------DGTIQLWSGYKL 501 (556)
Q Consensus 446 ~~I~iwdi~g~---~i~~~~-----------~~~~i~~i~~s~~pdg~~~~~l~tg~~----------dg~I~iwd~~~~ 501 (556)
+.|++.|..+. .+..+. ..+....++++ +++ +.+.+... .+.|.+.|+.++
T Consensus 247 g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~--~~~---~~lyV~~~~~~~~~hk~~~~~V~viD~~t~ 321 (386)
T 3sjl_D 247 GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH--RAL---DRIYLLVDQRDEWRHKTASRFVVVLDAKTG 321 (386)
T ss_dssp SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE--TTT---TEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred CEEEEEECCCCcceeecceeccccccccccccCCCcceeeEC--CCC---CeEEEEeccccccccCCCCCEEEEEECCCC
Confidence 89999999743 222221 12334457777 777 45554432 257999999999
Q ss_pred eEEEEecCCCCCCeEEEEEecCCC-EEEEE-cCCCcEEEEEcCCCCCcCeee
Q psy10778 502 AHLLTLNTNVALPVIAVTYSCDSQ-HLYAS-NTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 502 ~~~~~~~~~h~~~V~~l~~s~dg~-~l~sg-s~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+.++.+..+ ..+.++++++|++ +|+++ ..++.|.++|..+++.+.+++
T Consensus 322 kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 322 ERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp CEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred eEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 999999843 5788999999996 66665 458999999999988776654
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=9.1e-11 Score=120.53 Aligned_cols=201 Identities=9% Similarity=-0.016 Sum_probs=108.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
.+..|+.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.||.|+.||..++ +.+..+..+
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG---------~~~w~~~~~ 78 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN---------EGLTKLPFT 78 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECTTTCCEEEC--------------CCSEECSCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeCCCCEEEEEECCCC---------ceeeeeecc
Confidence 778889999999999999988776653 45555555667778888889999999999776 222222222
Q ss_pred Ccc-EE-EEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SAC-VT-DLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~-V~-~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
... +. +..+. .+..+++|+.|+.++.||..+|+.+..+.. + . ...++|+++.+++++ .++.|+.||
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~-~-~----~~~~~p~~~~v~~~~-----~dg~v~a~d 146 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSS-A-F----ADSLSPSTSLLYLGR-----TEYTITMYD 146 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEE-----EEEEEECCC
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecC-C-C----cccccccCCEEEEEe-----cCCEEEEEE
Confidence 110 10 00111 345678888899999999999998887776 3 2 234566888888887 789999999
Q ss_pred eC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEE-EEEecCC
Q psy10778 453 IN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIA-VTYSCDS 524 (556)
Q Consensus 453 i~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~-l~~s~dg 524 (556)
.+ |+.+....... ....++. .+......+++++.+|.|+.||..+++.+.... ...++.. ..++++|
T Consensus 147 ~~tG~~~W~~~~~~-~~~~~~~--~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~--~~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 147 TKTRELRWNATYFD-YAASLPE--DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN--YASPVVAFYVWQREG 215 (369)
T ss_dssp SSSSSCCCEEEEEE-ECCBCCC--CCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE--CSSCEEEEEECTTSS
T ss_pred CCCCCEEEeEeccc-ccCcccc--CCccccceEEEECCCCEEEEEECCCCcEEEEec--CCCceEEEEEecCCc
Confidence 86 77655443211 1112222 211000256778889999999999999888876 2344443 2333444
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=1.5e-07 Score=94.42 Aligned_cols=196 Identities=13% Similarity=0.082 Sum_probs=129.2
Q ss_pred eEEEEEcCCC-CEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCC
Q psy10778 327 IATATTAPDC-HTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDIN 405 (556)
Q Consensus 327 V~~i~~s~dg-~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~ 405 (556)
..+.+|++++ ..++++..++.|..|+..++. ...+. ....+.+++++++++++++. .+| |.+||..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~----------~~~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~ 117 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGR----------KTVHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTA 117 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTE----------EEEEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCc----------EEEEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECC
Confidence 4567899974 456666678899999876531 11222 34679999999999877765 444 9999998
Q ss_pred CCeEEEEeCCC--CCCCCeeEEEEeCCCCeEEEEeecC-cCCCCeEEEEEeCCcEEEEeecCCCeEEEEEeeCCCCCcce
Q psy10778 406 TIGYIREIPCV--DPNTPVSHVTMSETNGEIASVLQTT-KTGGSILRLHTINAQLITSLASELRITSVTFSNAPEGVSQN 482 (556)
Q Consensus 406 ~~~~v~~l~~~--h~~~~V~~l~~sp~~~~i~s~s~~~-~~~d~~I~iwdi~g~~i~~~~~~~~i~~i~~s~~pdg~~~~ 482 (556)
+++........ .....+..++++|+|+.+++..... ....+.|..++ +++.............++|+ +++ +
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s--~dg---~ 191 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPNSICFS--PDG---T 191 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEEEEEEC--TTS---C
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccCCeEEc--CCC---C
Confidence 87754333210 1023588999999998666543100 00125666666 56544333334567899999 888 6
Q ss_pred EEE-EEeCCCeEEEEeCC--CC-e-----EEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 483 VIV-TGHSDGTIQLWSGY--KL-A-----HLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 483 ~l~-tg~~dg~I~iwd~~--~~-~-----~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
.++ +.+.++.|.+||+. ++ + .+..+. .....+.+++++++|.+.++...++.|.+|+..
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECC-CCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 554 44567899999975 55 2 233333 234567899999999888777677899999983
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.94 E-value=3.9e-08 Score=109.48 Aligned_cols=227 Identities=6% Similarity=-0.051 Sum_probs=142.0
Q ss_pred ccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCc-------------EEEEEeeeccCccccccc
Q psy10778 299 NECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGN-------------ILVYEYELNASTNKIEFC 365 (556)
Q Consensus 299 gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~-------------I~vwd~~~~~~~~~~~~~ 365 (556)
|+.+..|+++|+++++...... +......++|+ ||+.|+.++.+.. |++|++.+.....
T Consensus 151 G~~~~~i~v~dl~tg~~~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~----- 222 (693)
T 3iuj_A 151 GSDWREIHLMDVESKQPLETPL--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDD----- 222 (693)
T ss_dssp SCCEEEEEEEETTTCSEEEEEE--EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGC-----
T ss_pred CCceEEEEEEECCCCCCCcccc--CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccc-----
Confidence 4445789999999987544321 11112567899 9999999887743 8888876542111
Q ss_pred CCCeEeeC-CCccEEEEEEccCCCEEEEEc----CCCcEEEEeCCCCe-EEEEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 366 KPPTILLG-HSACVTDLYLCAGFSVAVSSS----EDGTCLLWDINTIG-YIREIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 366 ~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs----~Dg~I~iwdl~~~~-~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
..+..... |...+..+.|+|+|++|+..+ .+..|.++|+.++. ..+.+.. + ....... ++++++.|+..+.
T Consensus 223 ~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~-~-~~~~~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 223 RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG-D-LDADVSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC-S-SSSCEEE-EEEETTEEEEEEC
T ss_pred eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC-C-CCceEEE-EeccCCEEEEEEC
Confidence 11111223 445678899999999765433 23589999998763 3445544 4 4444444 6777887776663
Q ss_pred cCcCCCCeEEEEEeCC-cE---EEEeecCCCeEEEEEeeCCCCCcceEEE-EEeCCC--eEEEEeCCCCeEEEEecCCCC
Q psy10778 440 TTKTGGSILRLHTINA-QL---ITSLASELRITSVTFSNAPEGVSQNVIV-TGHSDG--TIQLWSGYKLAHLLTLNTNVA 512 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~g-~~---i~~~~~~~~i~~i~~s~~pdg~~~~~l~-tg~~dg--~I~iwd~~~~~~~~~~~~~h~ 512 (556)
... ..+.|..+|+++ .. .....+...+. .|+ +++ +.|+ +...+| .|++|++. +.....+.....
T Consensus 300 ~~~-~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s--~~g---~~lv~~~~~~g~~~l~~~d~~-g~~~~~l~~p~~ 370 (693)
T 3iuj_A 300 RDA-PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH--SGS---GYLFAEYMVDATARVEQFDYE-GKRVREVALPGL 370 (693)
T ss_dssp TTC-TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE--EET---TEEEEEEEETTEEEEEEECTT-SCEEEEECCSSS
T ss_pred CCC-CCCEEEEEeCCCCCccccEEEecCCCCEE--EEE--EEC---CEEEEEEEECCeeEEEEEECC-CCeeEEeecCCC
Confidence 211 246899999873 22 22233444444 777 566 4554 444555 68899986 445556543344
Q ss_pred CCeEEEEEecCCCEEEEEcCC----CcEEEEEcCCCC
Q psy10778 513 LPVIAVTYSCDSQHLYASNTE----GLVIIWESSSHN 545 (556)
Q Consensus 513 ~~V~~l~~s~dg~~l~sgs~D----g~V~vwdl~~~~ 545 (556)
..+..+.+++++..++....+ +.|..||+.+++
T Consensus 371 ~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 371 GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 567788888888766655444 889999987754
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.93 E-value=9e-09 Score=105.12 Aligned_cols=220 Identities=10% Similarity=-0.035 Sum_probs=142.4
Q ss_pred eEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe----------CCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 304 LIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL----------TSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 304 ~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+|.+.|..+++.+..+..+.. + .++++||+++++++. .++.|.+||..+. +.+..+..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~---------~vv~~I~v 114 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF---------LPIADIEL 114 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC---------CEEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---------CEEEEEEC
Confidence 888999999988888876654 4 799999999999886 4789999999876 44455542
Q ss_pred C-------CccEEEEEEccCCCEEEEEcC--CCcEEE--EeCCCCeEEEEeCCCC-----CCCCeeEEEEeCCCC-----
Q psy10778 374 H-------SACVTDLYLCAGFSVAVSSSE--DGTCLL--WDINTIGYIREIPCVD-----PNTPVSHVTMSETNG----- 432 (556)
Q Consensus 374 h-------~~~V~~l~~s~~~~~l~sgs~--Dg~I~i--wdl~~~~~v~~l~~~h-----~~~~V~~l~~sp~~~----- 432 (556)
. ......++++|||++++.+.. +..+.+ +|+.+ +.++..+. +.+.-.-++.++++.
T Consensus 115 ~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 115 PDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp TTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEE
T ss_pred CCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEE
Confidence 2 123457899999998888764 467888 99876 33332200 000001122222222
Q ss_pred --------------------------------eEEEEeecCcCCCCeEEEEEeCC---cEEEEeec-----------CCC
Q psy10778 433 --------------------------------EIASVLQTTKTGGSILRLHTINA---QLITSLAS-----------ELR 466 (556)
Q Consensus 433 --------------------------------~i~s~s~~~~~~d~~I~iwdi~g---~~i~~~~~-----------~~~ 466 (556)
.++..+ . +.+.+.|+.+ +.+..+.. ...
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs-----~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV-----A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB-----S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred CccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc-----C-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 222222 3 5566666642 12222211 111
Q ss_pred eEEEEEeeCCCCCcceEEEEEeC---------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC-EEEEEc-CCCc
Q psy10778 467 ITSVTFSNAPEGVSQNVIVTGHS---------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ-HLYASN-TEGL 535 (556)
Q Consensus 467 i~~i~~s~~pdg~~~~~l~tg~~---------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~-~l~sgs-~Dg~ 535 (556)
...++++ +++ +.+.++.. ++.+.++|+.+++.+..+..+ ....+++|++||+ .+++.. .++.
T Consensus 266 ~~~v~~s--~dg---~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 266 FQMVAKL--KNT---DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SSCEEEE--TTT---TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTE
T ss_pred ceeeEEc--CCC---CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEccCCCCe
Confidence 1226788 887 55554432 235669999999999998743 3689999999997 566666 5899
Q ss_pred EEEEEcCCCCCcCeee
Q psy10778 536 VIIWESSSHNRTPKFL 551 (556)
Q Consensus 536 V~vwdl~~~~~~~~~~ 551 (556)
|.++|+.+.+.+.++.
T Consensus 339 VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 339 LDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEEEESSSCEEEEECC
T ss_pred EEEEECCCCcEEEEEE
Confidence 9999999987665553
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.88 E-value=2.3e-07 Score=102.99 Aligned_cols=244 Identities=10% Similarity=0.096 Sum_probs=152.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCC-CCC---ceEEEEEcCCCCEEEEEe------CCCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPP-LGA---TIATATTAPDCHTLWLGL------TSGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~-h~~---~V~~i~~s~dg~~l~tgs------~Dg~I~vwd~~~~~~~~~~~~ 364 (556)
.+..++.|+.|..+|.++++.+-..... +.. .+.+.-...++ .+++++ .+|.|+.||..++...-....
T Consensus 123 ~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 123 KVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 6777889999999999999877665543 211 11110001144 445543 368899988877621100000
Q ss_pred --cCCCeE------------e--------eCCCccEEEEEEccCCCEEEEEcCCCc-------------------EEEEe
Q psy10778 365 --CKPPTI------------L--------LGHSACVTDLYLCAGFSVAVSSSEDGT-------------------CLLWD 403 (556)
Q Consensus 365 --~~~~~~------------l--------~~h~~~V~~l~~s~~~~~l~sgs~Dg~-------------------I~iwd 403 (556)
..+... . .++...-..++++++..+++.++.++. |..+|
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD 281 (689)
T 1yiq_A 202 VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVN 281 (689)
T ss_dssp SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEE
T ss_pred cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEE
Confidence 000000 0 011111125788888889999888764 99999
Q ss_pred CCCCeEEEEeCCC-CC------CCCeeEEEEeCCCC---eEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC--C----
Q psy10778 404 INTIGYIREIPCV-DP------NTPVSHVTMSETNG---EIASVLQTTKTGGSILRLHTIN-AQLITSLASEL--R---- 466 (556)
Q Consensus 404 l~~~~~v~~l~~~-h~------~~~V~~l~~sp~~~---~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~--~---- 466 (556)
..+|+.+..+... |+ ..++.......+|+ .++.++ .+|.++++|.+ |+++....... .
T Consensus 282 ~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~-----~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 282 ADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP-----KNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC-----TTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred ccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC-----CCCeEEEEECCCCCEecccccccccccccc
Confidence 9999988766431 20 01222222233454 566666 89999999986 88875432111 0
Q ss_pred ----------------------------------eEEEEEeeCCCCCcceEEEEEeC-----------------------
Q psy10778 467 ----------------------------------ITSVTFSNAPEGVSQNVIVTGHS----------------------- 489 (556)
Q Consensus 467 ----------------------------------i~~i~~s~~pdg~~~~~l~tg~~----------------------- 489 (556)
-..++++ |+. .+++++..
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d--p~~---~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN--PDT---GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQ 431 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE--TTT---TEEEEEEEECCEEEECCSSCCCCCSCTTSCC
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC--CCC---CEEEEeccccceeeeeccccccccccccccc
Confidence 1125777 655 45655421
Q ss_pred ----------------------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 490 ----------------------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 490 ----------------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
+|.|+.||+.+++.+..+.. ..++..-.++..+.++++|+.||.++.||.++++.+
T Consensus 432 ~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 432 LGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY--VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC--CCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 37899999999999988873 234444466777889999999999999999999887
Q ss_pred Ceee
Q psy10778 548 PKFL 551 (556)
Q Consensus 548 ~~~~ 551 (556)
..+.
T Consensus 510 w~~~ 513 (689)
T 1yiq_A 510 WEQP 513 (689)
T ss_dssp EEEE
T ss_pred eeee
Confidence 6664
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=1.5e-10 Score=118.92 Aligned_cols=186 Identities=15% Similarity=0.093 Sum_probs=105.2
Q ss_pred CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeC
Q psy10778 335 DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIP 414 (556)
Q Consensus 335 dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~ 414 (556)
++..+++++.||.|+.||..++ +.+..+.. +.+.+..+..++..+++++.||.|+.||..+|+.+..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG---------~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG---------SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC---------CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS
T ss_pred eCCEEEEEcCCCEEEEEECCCC---------CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee
Confidence 5678999999999999998876 33344443 444445555677788888999999999999988777665
Q ss_pred CCCCCC-Cee-EEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCC
Q psy10778 415 CVDPNT-PVS-HVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDG 491 (556)
Q Consensus 415 ~~h~~~-~V~-~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg 491 (556)
. + .. .+. ...+. .++.+++++ .++.|+.||.+ |+.+..+..... ..++ |++ ..+++++.++
T Consensus 77 ~-~-~~~~~~~sp~~~-~~~~v~~g~-----~dg~v~a~D~~tG~~~w~~~~~~~---~~~~--p~~---~~v~~~~~dg 140 (369)
T 2hz6_A 77 F-T-IPELVQASPCRS-SDGILYMGK-----KQDIWYVIDLLTGEKQQTLSSAFA---DSLS--PST---SLLYLGRTEY 140 (369)
T ss_dssp C-C-HHHHHTTCSCC------CCCCE-----EEEEEEEECCC------------------------------EEEEEEEE
T ss_pred c-c-CccccccCceEe-cCCEEEEEe-----CCCEEEEEECCCCcEEEEecCCCc---cccc--ccC---CEEEEEecCC
Confidence 4 2 11 110 11111 345666666 68899999997 888776654332 3345 556 6888999999
Q ss_pred eEEEEeCCCCeEEEEecCCCCCCeEEEEEecCC---CEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 492 TIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDS---QHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 492 ~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg---~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
.|+.||..+++.+..+.. + .....+++.+. ..+++++.||.|+.||..+++.+..+
T Consensus 141 ~v~a~d~~tG~~~W~~~~-~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 141 TITMYDTKTRELRWNATY-F--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp EEECCCSSSSSCCCEEEE-E--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCCEEEeEec-c--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 999999999987666541 1 11222333332 45777888999999999988765443
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=4e-07 Score=100.85 Aligned_cols=229 Identities=14% Similarity=0.109 Sum_probs=153.8
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCC-------------------------------ceEEEEEcCCCCEEEEEeCCC----
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGA-------------------------------TIATATTAPDCHTLWLGLTSG---- 346 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~-------------------------------~V~~i~~s~dg~~l~tgs~Dg---- 346 (556)
+|.|+.+|.++++.+-.+...... ....+++++++..++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 799999999999877655432111 112567888888999887664
Q ss_pred ---------------cEEEEEeeeccCcccccccCCCeEeeC--CC-------ccEEEEEEccCC---CEEEEEcCCCcE
Q psy10778 347 ---------------NILVYEYELNASTNKIEFCKPPTILLG--HS-------ACVTDLYLCAGF---SVAVSSSEDGTC 399 (556)
Q Consensus 347 ---------------~I~vwd~~~~~~~~~~~~~~~~~~l~~--h~-------~~V~~l~~s~~~---~~l~sgs~Dg~I 399 (556)
.|..+|..++ +.+..+.. |. .....+....+| ..++.++.+|.+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG---------~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l 339 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTG---------KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFF 339 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTC---------CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEE
T ss_pred CCCCCccCCCCeeeEEEEEEECCCC---------CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEE
Confidence 4777777665 22222221 21 122223334467 689999999999
Q ss_pred EEEeCCCCeEEEEeCCCCCCC----------Ce------------------------eEEEEeCCCCeEEEEeecC----
Q psy10778 400 LLWDINTIGYIREIPCVDPNT----------PV------------------------SHVTMSETNGEIASVLQTT---- 441 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~~h~~~----------~V------------------------~~l~~sp~~~~i~s~s~~~---- 441 (556)
.++|..+|+.+..+.. .+.. ++ ..++++|+++.+++.....
T Consensus 340 ~~lD~~tG~~l~~~~~-~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~ 418 (677)
T 1kb0_A 340 FVLDRTNGKFISAKNF-VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNL 418 (677)
T ss_dssp EEEETTTCCEEEEEES-SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEE
T ss_pred EEEECCCCCEeccccc-cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceee
Confidence 9999999998876653 1001 01 1578899988888765310
Q ss_pred --------c--------------------------CCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEE
Q psy10778 442 --------K--------------------------TGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVT 486 (556)
Q Consensus 442 --------~--------------------------~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~t 486 (556)
+ ...+.|..||++ |+.+....+...+....+. ..+ .++++
T Consensus 419 ~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~--~~g---~~v~~ 493 (677)
T 1kb0_A 419 MDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLT--TAG---NVVFQ 493 (677)
T ss_dssp EECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEE--ETT---TEEEE
T ss_pred ecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceE--eCC---CEEEE
Confidence 0 012789999997 8888888776655555565 455 57888
Q ss_pred EeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEE-cC----------------CCcEEEEEcCCCC
Q psy10778 487 GHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYAS-NT----------------EGLVIIWESSSHN 545 (556)
Q Consensus 487 g~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sg-s~----------------Dg~V~vwdl~~~~ 545 (556)
++.||.+++||..+++.+.++..++.....-+.+..+|+.+++. +. .+.+.+|.+....
T Consensus 494 g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a 569 (677)
T 1kb0_A 494 GTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKA 569 (677)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBC
T ss_pred ECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccccc
Confidence 99999999999999999999985443333455677888755543 22 3688899987533
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.82 E-value=2.5e-07 Score=92.17 Aligned_cols=218 Identities=10% Similarity=0.012 Sum_probs=147.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
.+..|+.++.|..++.. ++...... .+...+.++...+++. ++.|+.++.|..++.. + +........
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g---------~~~~~~~~~ 175 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-G---------TEKWRFKTN 175 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-S---------CEEEEEECS
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-C---------CEeEEEecC
Confidence 56667788999999988 65444443 2344456666776765 6667888999998876 4 222333334
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...+.++...+++.+.+ ++ +.+..+| .+++.+..... . ...+.++...+++. |..++ .++.|..+|.+
T Consensus 176 ~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~-~-~~~~~~~~~~~~g~-l~v~t-----~~~gl~~~~~~ 243 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYA-G-YWTVTRPAISEDGT-IYVTS-----LDGHLYAINPD 243 (330)
T ss_dssp SCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECC-S-SCCCSCCEECTTSC-EEEEE-----TTTEEEEECTT
T ss_pred CCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEcc-C-CcceeceEECCCCe-EEEEc-----CCCeEEEECCC
Confidence 45566777777777544 44 8899999 77777777765 4 56788888888765 44555 67788888877
Q ss_pred CcEEEEeecCC-CeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCC
Q psy10778 455 AQLITSLASEL-RITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTE 533 (556)
Q Consensus 455 g~~i~~~~~~~-~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D 533 (556)
++.+....... .+.++... +++ .|.+++.+|.|..+|. +++.+..+. .....+.++..+++|+ |..++.+
T Consensus 244 g~~~~~~~~~~~~~~~~~~~--~~g----~l~v~t~~ggl~~~d~-~g~~~~~~~-~~~~~~~~~~~d~~g~-l~~gt~~ 314 (330)
T 3hxj_A 244 GTEKWRFKTGKRIESSPVIG--NTD----TIYFGSYDGHLYAINP-DGTEKWNFE-TGSWIIATPVIDENGT-IYFGTRN 314 (330)
T ss_dssp SCEEEEEECSSCCCSCCEEC--TTS----CEEEECTTCEEEEECT-TSCEEEEEE-CSSCCCSCCEECTTCC-EEEECTT
T ss_pred CCEeEEeeCCCCccccceEc--CCC----eEEEecCCCCEEEECC-CCcEEEEEE-cCCccccceEEcCCCE-EEEEcCC
Confidence 88776665432 33445554 555 5778888889999996 788777776 3345677777777776 5568899
Q ss_pred CcEEEEEcCCCCC
Q psy10778 534 GLVIIWESSSHNR 546 (556)
Q Consensus 534 g~V~vwdl~~~~~ 546 (556)
|.+++...+..+.
T Consensus 315 G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 315 GKFYALFNLEHHH 327 (330)
T ss_dssp SCEEEEEC-----
T ss_pred CeEEEEecccccc
Confidence 9999988766443
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.2e-07 Score=105.47 Aligned_cols=200 Identities=14% Similarity=0.068 Sum_probs=128.5
Q ss_pred CCCCceEEEEEcCCCCEEEEE-----eCCCcEEEEEeeeccCcccccccCCCeEeeCCCcc--EEEEEEccCCCEEEEEc
Q psy10778 322 PLGATIATATTAPDCHTLWLG-----LTSGNILVYEYELNASTNKIEFCKPPTILLGHSAC--VTDLYLCAGFSVAVSSS 394 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tg-----s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~--V~~l~~s~~~~~l~sgs 394 (556)
+|...+..++|||||++||.+ +...+|++||+.++ +.+. .+... ...++|+ |++.|+.++
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg---------~~~~---~~~~~~k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK---------QPLE---TPLKDVKFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC---------SEEE---EEEEEEESCCCEEE-TTTEEEEEE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC---------CCCc---cccCCceeccEEEe-CCCEEEEEE
Confidence 355578899999999998854 33357999999876 1111 12222 2567899 999888888
Q ss_pred CCCc-------------EEEEeCCCCeE--EEEeCCCCC--CCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-C-
Q psy10778 395 EDGT-------------CLLWDINTIGY--IREIPCVDP--NTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-A- 455 (556)
Q Consensus 395 ~Dg~-------------I~iwdl~~~~~--v~~l~~~h~--~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g- 455 (556)
.+.. |.+|++.+... ...+.. .. ......+.++|||++|+....... ..+.|+++|++ +
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANST-SGNRLYVKDLSQEN 270 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSS-SCCEEEEEETTSTT
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCC-CCcEEEEEECCCCC
Confidence 7743 99999987642 333333 20 234678999999999876653221 33689999986 3
Q ss_pred -cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCC---CeEEEEeCCCCeE--EEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 456 -QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSD---GTIQLWSGYKLAH--LLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 456 -~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~d---g~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
+.............. ++ ++|. .++++...+ +.|..+|+.++.. ...+. .+...+. .|+++++.|+.
T Consensus 271 ~~~~~l~~~~~~~~~~-~~--~~g~--~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~--~~s~~g~~lv~ 342 (693)
T 3iuj_A 271 APLLTVQGDLDADVSL-VD--NKGS--TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQQVL--TVHSGSGYLFA 342 (693)
T ss_dssp CCCEEEECSSSSCEEE-EE--EETT--EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCE--EEEEETTEEEE
T ss_pred CceEEEeCCCCceEEE-Ee--ccCC--EEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCCCEE--EEEEECCEEEE
Confidence 333333344444444 55 4442 555555543 6899999977653 23444 3444454 88999988776
Q ss_pred EcC-CC--cEEEEEcCCC
Q psy10778 530 SNT-EG--LVIIWESSSH 544 (556)
Q Consensus 530 gs~-Dg--~V~vwdl~~~ 544 (556)
... +| .|++|++..+
T Consensus 343 ~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEEETTEEEEEEECTTSC
T ss_pred EEEECCeeEEEEEECCCC
Confidence 654 44 6889988753
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.82 E-value=1e-06 Score=97.83 Aligned_cols=233 Identities=12% Similarity=0.080 Sum_probs=152.6
Q ss_pred CCCeEEEEeCCCCCCcceEcCCC-C-----------------------------CceEEEEEcCCCCEEEEEeCCCc---
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPL-G-----------------------------ATIATATTAPDCHTLWLGLTSGN--- 347 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h-~-----------------------------~~V~~i~~s~dg~~l~tgs~Dg~--- 347 (556)
.+|.|+.+|.++++.+-.+.... . ..-..+++++++..++.++.++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 37899999999998766554211 0 00125778888899999987764
Q ss_pred ----------------EEEEEeeeccCcccccccCCCeEeeC--C-------CccEEEEEEccCCC---EEEEEcCCCcE
Q psy10778 348 ----------------ILVYEYELNASTNKIEFCKPPTILLG--H-------SACVTDLYLCAGFS---VAVSSSEDGTC 399 (556)
Q Consensus 348 ----------------I~vwd~~~~~~~~~~~~~~~~~~l~~--h-------~~~V~~l~~s~~~~---~l~sgs~Dg~I 399 (556)
|..+|..++ +.+-.+.. | ..+........+|+ .++.++.+|.+
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG---------~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l 331 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTG---------EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFF 331 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTC---------CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEE
T ss_pred cCCCCCCCCCceeeeeEEEEEccCC---------ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeE
Confidence 888888876 22222221 2 12222223333564 78899999999
Q ss_pred EEEeCCCCeEEEEeCCCCCCC--------------------------------------CeeEEEEeCCCCeEEEEeecC
Q psy10778 400 LLWDINTIGYIREIPCVDPNT--------------------------------------PVSHVTMSETNGEIASVLQTT 441 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~~h~~~--------------------------------------~V~~l~~sp~~~~i~s~s~~~ 441 (556)
+++|..+|+.+..... .+.. .-..++++|+.+.+++.....
T Consensus 332 ~~lD~~tG~~l~~~~~-~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~ 410 (689)
T 1yiq_A 332 YVIDRATGELLSAKGI-VPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIM 410 (689)
T ss_dssp EEEETTTCCEEEEEES-SCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEEC
T ss_pred EEEECCCCCEeccccc-cccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEecccc
Confidence 9999999998754332 1000 012378899888887764320
Q ss_pred ----------------------c------------------CCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCc
Q psy10778 442 ----------------------K------------------TGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVS 480 (556)
Q Consensus 442 ----------------------~------------------~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~ 480 (556)
+ ..++.|+.||++ |+.+.............+. ..+
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~--tag-- 486 (689)
T 1yiq_A 411 SAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLS--TAG-- 486 (689)
T ss_dssp CEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEE--ETT--
T ss_pred ceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccce--ECC--
Confidence 0 013789999997 8888888765555444555 445
Q ss_pred ceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc-C--------------------CCcEEEE
Q psy10778 481 QNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN-T--------------------EGLVIIW 539 (556)
Q Consensus 481 ~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs-~--------------------Dg~V~vw 539 (556)
.++++|+.||.++.||..+|+.+.++..++.....-+.|..+|+..++.. . .+.+.+|
T Consensus 487 -glvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f 565 (689)
T 1yiq_A 487 -NLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTY 565 (689)
T ss_dssp -TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEE
T ss_pred -CEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEecCCccccccccccccccccCCCceEEEe
Confidence 68899999999999999999999998754333334467788887554422 1 2367888
Q ss_pred EcCCCCCcC
Q psy10778 540 ESSSHNRTP 548 (556)
Q Consensus 540 dl~~~~~~~ 548 (556)
.+......|
T Consensus 566 ~l~~~~~~p 574 (689)
T 1yiq_A 566 KLGGTAKLQ 574 (689)
T ss_dssp EETCCCCCC
T ss_pred ecCCccccc
Confidence 887654433
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.82 E-value=5.1e-08 Score=103.89 Aligned_cols=228 Identities=10% Similarity=0.029 Sum_probs=164.4
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEE-c-CCCCEEEEEeC------------------CCcEEEEEe
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATT-A-PDCHTLWLGLT------------------SGNILVYEY 353 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~-s-~dg~~l~tgs~------------------Dg~I~vwd~ 353 (556)
.+.+....++.|.+.|+.+.+...++..........+++ + |+++++++++. ++.+.+.|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 366677788899999999988777666555567889988 4 89999999852 356788887
Q ss_pred eeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC------------------------------------
Q psy10778 354 ELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG------------------------------------ 397 (556)
Q Consensus 354 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg------------------------------------ 397 (556)
.+. +...++.--. .-..++++|+|+++++.+.+.
T Consensus 183 ~t~---------~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 183 DKW---------EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp TTT---------EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CCC---------eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 654 2223333111 334577889999888777442
Q ss_pred --cEEEEeCCC--CeE-EEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc-------------EEE
Q psy10778 398 --TCLLWDINT--IGY-IREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ-------------LIT 459 (556)
Q Consensus 398 --~I~iwdl~~--~~~-v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~-------------~i~ 459 (556)
.|.|.|..+ ++. ++.+.. .....++.++|||+++++++. .+.+|.++|++.. .+.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv---g~~PhGv~~sPDGk~v~V~~~----~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI---ANNPHGCNMAPDKKHLCVAGK----LSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE---ESSCCCEEECTTSSEEEEECT----TSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred ECcEEEEeCcccCCceeEEEEec---CCCceEEEEcCCCCEEEEeCC----CCCeEEEEECcccccccccccCcccceEE
Confidence 477888887 444 566654 455678999999999988875 6789999999732 556
Q ss_pred EeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC----------CeEEEEecCCCCCCe-----EEEEEecCC
Q psy10778 460 SLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK----------LAHLLTLNTNVALPV-----IAVTYSCDS 524 (556)
Q Consensus 460 ~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~----------~~~~~~~~~~h~~~V-----~~l~~s~dg 524 (556)
..........++|+ ++| +..++...|+.|.+||+.. .+.+.++. .|-.+- .++.++|||
T Consensus 326 ~v~vG~gP~h~aF~--~dG---~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid-V~yqpGh~~~~~g~t~~~DG 399 (595)
T 1fwx_A 326 EPELGLGPLHTAFD--GRG---NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD-VHYQPGHLKTVMGETLDATN 399 (595)
T ss_dssp CCBCCSCEEEEEEC--TTS---EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-CSSCEEEEEETTTTSTTCCS
T ss_pred EcCCCCCcceEEEC--CCC---eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-cccccccceeccceEeCCCC
Confidence 66667889999999 898 7778888999999999876 56777777 343321 223558999
Q ss_pred CEEEEEcCCC--cE-----------EEEEcCCC
Q psy10778 525 QHLYASNTEG--LV-----------IIWESSSH 544 (556)
Q Consensus 525 ~~l~sgs~Dg--~V-----------~vwdl~~~ 544 (556)
++|+++..-. ++ .++|+..+
T Consensus 400 k~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 400 DWLVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp SEEEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred CEEEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 9999876422 33 78898543
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.82 E-value=6.9e-07 Score=92.15 Aligned_cols=224 Identities=16% Similarity=0.078 Sum_probs=147.5
Q ss_pred cceEEeccCCCeEEEEeCCCCC----CcceEc---C---CCCCceEEEEEcCCCCEEEEEeCC------CcEEEEEeeec
Q psy10778 293 AGMICWNECDNLIRLKMSKELP----ATPVIR---P---PLGATIATATTAPDCHTLWLGLTS------GNILVYEYELN 356 (556)
Q Consensus 293 ~~~l~~gs~Dg~I~lw~~~~~~----~~~~~~---~---~h~~~V~~i~~s~dg~~l~tgs~D------g~I~vwd~~~~ 356 (556)
+.+++.|..++.|.++|..+.+ ....++ . .....-..+...|+| .++++..+ |.|.++|..+.
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 3478888999999999997652 233331 0 011134556788999 77776655 78999998765
Q ss_pred cCcccccccCCCeEeeC--CC-ccEEEEEEccCCCEEEEEc-------------------CCCcEEEEeCCCCeEEEEeC
Q psy10778 357 ASTNKIEFCKPPTILLG--HS-ACVTDLYLCAGFSVAVSSS-------------------EDGTCLLWDINTIGYIREIP 414 (556)
Q Consensus 357 ~~~~~~~~~~~~~~l~~--h~-~~V~~l~~s~~~~~l~sgs-------------------~Dg~I~iwdl~~~~~v~~l~ 414 (556)
+.+..+.. .. .--..+.|+|+++.+++.. .+.+|.+||+.+++.+.++.
T Consensus 175 ---------~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 175 ---------EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp ---------CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred ---------eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 33344431 11 2234588899999888874 36899999999998888887
Q ss_pred CCCCCCCeeEEEE--eCCCCeEEEEee-cCcCCCCeEEEEEeC-CcE--EEEe--ec-----------------CCCeEE
Q psy10778 415 CVDPNTPVSHVTM--SETNGEIASVLQ-TTKTGGSILRLHTIN-AQL--ITSL--AS-----------------ELRITS 469 (556)
Q Consensus 415 ~~h~~~~V~~l~~--sp~~~~i~s~s~-~~~~~d~~I~iwdi~-g~~--i~~~--~~-----------------~~~i~~ 469 (556)
..........+.| +|++++..+++. +....+++|.+|..+ |+. ...+ .. ......
T Consensus 246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~ 325 (462)
T 2ece_A 246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTD 325 (462)
T ss_dssp SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCC
T ss_pred cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeE
Confidence 6100134556666 999998888872 000024577776654 321 1111 00 245678
Q ss_pred EEEeeCCCCCcceEEEEEe-CCCeEEEEeCC---CCeEEEEecCCCC-------------CCeEEEEEecCCCEEEEEc
Q psy10778 470 VTFSNAPEGVSQNVIVTGH-SDGTIQLWSGY---KLAHLLTLNTNVA-------------LPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 470 i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~---~~~~~~~~~~~h~-------------~~V~~l~~s~dg~~l~sgs 531 (556)
|.+| +|| ++|.++. ..+.|.++|+. +.+.+..+..+-. .....++++|||++|+++.
T Consensus 326 I~lS--~DG---rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 326 IDIS--LDD---KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEC--TTS---CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEC--CCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999 899 6776665 57899999985 3466777764211 1368899999999999988
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.79 E-value=1.8e-07 Score=103.54 Aligned_cols=244 Identities=11% Similarity=0.072 Sum_probs=156.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCC-CC---CceEEEEEcCCCCEEEEEeC------CCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPP-LG---ATIATATTAPDCHTLWLGLT------SGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~-h~---~~V~~i~~s~dg~~l~tgs~------Dg~I~vwd~~~~~~~~~~~~ 364 (556)
.+..++.|+.|..+|.++++.+-..... .. ..+.+.-.. .+..+++++. +|.|+.+|..++...-....
T Consensus 130 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 6777788999999999999887666533 10 112111111 1345555543 68899999876621100000
Q ss_pred cCCC--e------------Eee---------CCCccEEEEEEccCCCEEEEEcCCC-------------------cEEEE
Q psy10778 365 CKPP--T------------ILL---------GHSACVTDLYLCAGFSVAVSSSEDG-------------------TCLLW 402 (556)
Q Consensus 365 ~~~~--~------------~l~---------~h~~~V~~l~~s~~~~~l~sgs~Dg-------------------~I~iw 402 (556)
.... . ... +.......+++++++.+++.++.++ +|..+
T Consensus 209 ~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~Al 288 (677)
T 1kb0_A 209 VPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVAL 288 (677)
T ss_dssp SCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred CCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEE
Confidence 0000 0 000 1111223578888888888887664 59999
Q ss_pred eCCCCeEEEEeCCC-CC------CCCeeEEEEeCCC---CeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC------
Q psy10778 403 DINTIGYIREIPCV-DP------NTPVSHVTMSETN---GEIASVLQTTKTGGSILRLHTIN-AQLITSLASEL------ 465 (556)
Q Consensus 403 dl~~~~~v~~l~~~-h~------~~~V~~l~~sp~~---~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~------ 465 (556)
|..+|+.+..+... |+ ......+....+| +.++.++ .+|.++++|.. |+++.......
T Consensus 289 D~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~-----~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 289 DPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP-----KNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC-----TTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred ECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC-----CCCEEEEEECCCCCEeccccccccCcccc
Confidence 99999988765431 20 0122233334466 5677776 89999999996 88887664211
Q ss_pred ------Ce------------------------EEEEEeeCCCCCcceEEEEEeC--------------------------
Q psy10778 466 ------RI------------------------TSVTFSNAPEGVSQNVIVTGHS-------------------------- 489 (556)
Q Consensus 466 ------~i------------------------~~i~~s~~pdg~~~~~l~tg~~-------------------------- 489 (556)
.+ ..++++ |++ .+++++..
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d--p~~---~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 438 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN--PQT---GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGT 438 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE--TTT---TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGG
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEc--CCC---CEEEEeChhcceeeeccccccccccccccccccc
Confidence 01 146777 666 56666432
Q ss_pred -----------------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 490 -----------------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 490 -----------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.|.|..||+.+++.+.++. +..++.+..++.++..+++++.||.+++||..+++.+..+.
T Consensus 439 ~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~--~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 439 GWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE--HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp TCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccccccccccCCCCCccEEEEEeCCCCcEEeecC--CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeee
Confidence 2789999999999998887 33455566677788899999999999999999988876664
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.78 E-value=6.7e-07 Score=88.66 Aligned_cols=200 Identities=9% Similarity=-0.024 Sum_probs=130.5
Q ss_pred CCCceEEEEEcCCCC-EEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEE
Q psy10778 323 LGATIATATTAPDCH-TLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLL 401 (556)
Q Consensus 323 h~~~V~~i~~s~dg~-~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~i 401 (556)
........+|+++|+ +++++..++.|..|+.. + ....+..+...+.+++++++|+++++...++.|.+
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g----------~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G----------TVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S----------CEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C----------CEEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 334567899999998 66777778899999763 2 12445556677899999999997777777788999
Q ss_pred EeCCCCeEEEEeCCC--CCCCCeeEEEEeCCCCeEEE----EeecC--------cCCCCeEEEEEeC-CcEEEEeecCCC
Q psy10778 402 WDINTIGYIREIPCV--DPNTPVSHVTMSETNGEIAS----VLQTT--------KTGGSILRLHTIN-AQLITSLASELR 466 (556)
Q Consensus 402 wdl~~~~~v~~l~~~--h~~~~V~~l~~sp~~~~i~s----~s~~~--------~~~d~~I~iwdi~-g~~i~~~~~~~~ 466 (556)
|+.. ++........ .....+..++++++|..+++ +.... ....+.|..+|.. ++..... ....
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 9986 5533222110 10234678999999987775 22000 0013567778874 5443333 4456
Q ss_pred eEEEEEeeCCCCCcceEEEEEeCC------CeEEEEeCCCCeE--EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEE
Q psy10778 467 ITSVTFSNAPEGVSQNVIVTGHSD------GTIQLWSGYKLAH--LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVII 538 (556)
Q Consensus 467 i~~i~~s~~pdg~~~~~l~tg~~d------g~I~iwd~~~~~~--~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~v 538 (556)
...++|+ |++ +.|+++... +.|.+|++..... ...+.......+..++++++|++.+ ++.+ .|.+
T Consensus 190 p~gl~~s--pdg---~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~ 262 (305)
T 3dr2_A 190 PNGLAFS--PDE---QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCV 262 (305)
T ss_dssp EEEEEEC--TTS---SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEE
T ss_pred CcceEEc--CCC---CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEE
Confidence 7889999 898 777766654 7899999865431 1122111234466789999999544 4444 4999
Q ss_pred EEcC
Q psy10778 539 WESS 542 (556)
Q Consensus 539 wdl~ 542 (556)
|+..
T Consensus 263 ~~~~ 266 (305)
T 3dr2_A 263 FDSD 266 (305)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9874
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=4.7e-06 Score=80.71 Aligned_cols=227 Identities=9% Similarity=-0.035 Sum_probs=141.5
Q ss_pred CeEEEEeCCCCCCc-----ceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeCCCc
Q psy10778 303 NLIRLKMSKELPAT-----PVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLGHSA 376 (556)
Q Consensus 303 g~I~lw~~~~~~~~-----~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~ 376 (556)
+.|+.+++...... ..+. .....+..+++++++..|+.+ ..++.|.+++.... .....+.....
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~---------~~~~~~~~~~~ 79 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG---------EPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC---------CCEEEECTTCC
T ss_pred CeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC---------CcEEEEECCCC
Confidence 46777777654321 1121 112356799999976666555 45678999887643 11122222335
Q ss_pred cEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC
Q psy10778 377 CVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA 455 (556)
Q Consensus 377 ~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g 455 (556)
...++++++++. +.++-...+.|.++++........... . ......++++|+++.|..+.... ..+.|..++++|
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~-~~~P~~i~vd~~~g~lyv~~~~~--~~~~I~~~~~dg 155 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT-G-LVNPRGIVTDPVRGNLYWTDWNR--DNPKIETSHMDG 155 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-S-CSSEEEEEEETTTTEEEEEECCS--SSCEEEEEETTS
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC-C-CCCccEEEEeeCCCEEEEEECCC--CCcEEEEEecCC
Confidence 678999999755 555556678999999874332222332 1 35678999999877776665200 146898999886
Q ss_pred cEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCC
Q psy10778 456 QLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTE 533 (556)
Q Consensus 456 ~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D 533 (556)
.....+. .-.....++++ +++. .++++....+.|.++|.........+. . .....+++.. ++.++++...+
T Consensus 156 ~~~~~~~~~~~~~P~gia~d--~~~~--~lyv~d~~~~~I~~~~~~g~~~~~~~~-~-~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFD--AFSS--QLCWVDAGTHRAECLNPAQPGRRKVLE-G-LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTEEEEEEEEE-C-CCSEEEEEEE-TTEEEEEETTT
T ss_pred CCcEEEEECCCCCCcEEEEc--CCCC--EEEEEECCCCEEEEEecCCCceEEEec-C-CCCceEEEEe-CCEEEEEECCC
Confidence 5444332 23467899999 7651 455666677899999986544333333 2 2345677765 44445555566
Q ss_pred CcEEEEEcCCCCCcCee
Q psy10778 534 GLVIIWESSSHNRTPKF 550 (556)
Q Consensus 534 g~V~vwdl~~~~~~~~~ 550 (556)
+.|.++|..+++.+..+
T Consensus 229 ~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TEEEEEETTTTEEEEEE
T ss_pred CeEEEEeCCCCCceEEE
Confidence 89999999886655444
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=2e-07 Score=94.27 Aligned_cols=207 Identities=10% Similarity=-0.001 Sum_probs=135.3
Q ss_pred CceEEEEEcCCCCEEEEEe--CCCcEEEEEeeeccCccccccc-CCCeEeeCCCccEEEEEEccCCCEEEEEcC-----C
Q psy10778 325 ATIATATTAPDCHTLWLGL--TSGNILVYEYELNASTNKIEFC-KPPTILLGHSACVTDLYLCAGFSVAVSSSE-----D 396 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs--~Dg~I~vwd~~~~~~~~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-----D 396 (556)
..+..++++++|+.+++.. .++.++||.+..+ +.... .......+|...+.++++++++++.++-+. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g----~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD----GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT----EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC----CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5688999999999988864 2344677777622 11100 000112356678999999999887666543 5
Q ss_pred CcEEEEeCCCCeEEEEeCCC-----CCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeec-------
Q psy10778 397 GTCLLWDINTIGYIREIPCV-----DPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLAS------- 463 (556)
Q Consensus 397 g~I~iwdl~~~~~v~~l~~~-----h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~------- 463 (556)
+.|.+||+.+++.++.+..+ + ...+..++++++++.+..+.... ..++.|.+||+. ++....+..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~-~~~~~~v~vd~~~g~~yvtd~~~-~~~~~i~v~d~~~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLS-NSFVNDLAVDLIHNFVYISDPAP-DDKAALIRVDLQTGLAARVLQGYPGIAPE 170 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCT-TCCCCEEEEETTTTEEEEEECCS-GGGCEEEEEETTTCCEEEECTTCTTTSCC
T ss_pred CeEEEEECCCCeEEEEEECChhhccc-ccccceEEEecCCCEEEEEcCcc-CCCCeEEEEECCCCCEEEEecCCCccccc
Confidence 78999999999877776530 1 23568999998766665553100 025689999986 665544321
Q ss_pred -----------------------CCCeEEEEEeeCCCCCcceEEEEEeCCC-eEEEEeCC---CCe--------EEEEec
Q psy10778 464 -----------------------ELRITSVTFSNAPEGVSQNVIVTGHSDG-TIQLWSGY---KLA--------HLLTLN 508 (556)
Q Consensus 464 -----------------------~~~i~~i~~s~~pdg~~~~~l~tg~~dg-~I~iwd~~---~~~--------~~~~~~ 508 (556)
...+..++++ |+| +.|+++...+ .+..++.. .+. .+...
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s--~dg---~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLD--AEN---EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY- 244 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEEC--TTS---CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEec--cCC---CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-
Confidence 0235889999 888 7777777655 55555431 110 01111
Q ss_pred CCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 509 TNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 509 ~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
++......++++++|.++++...++.|.+||..++
T Consensus 245 -g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 245 -SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp -EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred -ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 12335667899999999999999999999998444
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.77 E-value=2e-06 Score=88.66 Aligned_cols=202 Identities=15% Similarity=0.072 Sum_probs=132.9
Q ss_pred CCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEee-------CCCccEEEEEEccCCCEEEEEcCC------CcE
Q psy10778 334 PDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILL-------GHSACVTDLYLCAGFSVAVSSSED------GTC 399 (556)
Q Consensus 334 ~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-------~h~~~V~~l~~s~~~~~l~sgs~D------g~I 399 (556)
.++++|++. ..+++|.|+|+.+.....+ ..+++. .....-..+..+|+| +++++..+ |.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~-----~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPK-----IIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCE-----EEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCce-----eeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 777777665 5778999999875532222 223331 111244567888999 77776655 789
Q ss_pred EEEeCCCCeEEEEeCCC-CCCCCeeEEEEeCCCCeEEEEeec----------Cc----CCCCeEEEEEeC-CcEEEEeec
Q psy10778 400 LLWDINTIGYIREIPCV-DPNTPVSHVTMSETNGEIASVLQT----------TK----TGGSILRLHTIN-AQLITSLAS 463 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~~-h~~~~V~~l~~sp~~~~i~s~s~~----------~~----~~d~~I~iwdi~-g~~i~~~~~ 463 (556)
.+.|..+++.+.++... .+..-...+.|+|+++.+++..-. .. ..+.+|.+||++ ++.+.++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 99999999999998740 101223458889999988876310 00 147899999997 677777765
Q ss_pred C---CCeEEEEEeeCCCCCcceEEEEEe------CCCeEEEEeCCCCe--EEEEe--cC----C-----------CCCCe
Q psy10778 464 E---LRITSVTFSNAPEGVSQNVIVTGH------SDGTIQLWSGYKLA--HLLTL--NT----N-----------VALPV 515 (556)
Q Consensus 464 ~---~~i~~i~~s~~pdg~~~~~l~tg~------~dg~I~iwd~~~~~--~~~~~--~~----~-----------h~~~V 515 (556)
. .....+.|...|++ +++.+++ .+++|.+|....++ ....+ .. + .....
T Consensus 247 g~~g~~P~~i~f~~~Pdg---~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 247 GEENRMALELRPLHDPTK---LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp CTTEEEEEEEEECSSTTC---CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred CCCCCccceeEeeECCCC---CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 4 34556667323888 6666655 56688776654433 12221 10 0 02457
Q ss_pred EEEEEecCCCEEEEEcC-CCcEEEEEcCCC
Q psy10778 516 IAVTYSCDSQHLYASNT-EGLVIIWESSSH 544 (556)
Q Consensus 516 ~~l~~s~dg~~l~sgs~-Dg~V~vwdl~~~ 544 (556)
..|.+|+||++|+++.. .+.|.++|+.+.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 88999999999998776 589999999753
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=2.7e-07 Score=93.29 Aligned_cols=199 Identities=12% Similarity=0.042 Sum_probs=133.3
Q ss_pred CCCCceEEEEEcCCCCEEEEEeC-----CCcEEEEEeeeccCcccccccCCCeEee------CCCccEEEEEEccCCC-E
Q psy10778 322 PLGATIATATTAPDCHTLWLGLT-----SGNILVYEYELNASTNKIEFCKPPTILL------GHSACVTDLYLCAGFS-V 389 (556)
Q Consensus 322 ~h~~~V~~i~~s~dg~~l~tgs~-----Dg~I~vwd~~~~~~~~~~~~~~~~~~l~------~h~~~V~~l~~s~~~~-~ 389 (556)
.|...+.+++++++|+++++-.. ++.|.+||..++ +.+..+. .+...+..+++++++. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg---------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~ 134 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN---------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFV 134 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT---------EEEEEEECCTTTSCTTCCCCEEEEETTTTEE
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC---------eEEEEEECChhhcccccccceEEEecCCCEE
Confidence 45678999999999876665543 578999998755 1122222 2234568899998654 4
Q ss_pred EEEEc---CCCcEEEEeCCCCeEEEEeCCCCC----------------------------CCCeeEEEEeCCCCeEEEEe
Q psy10778 390 AVSSS---EDGTCLLWDINTIGYIREIPCVDP----------------------------NTPVSHVTMSETNGEIASVL 438 (556)
Q Consensus 390 l~sgs---~Dg~I~iwdl~~~~~v~~l~~~h~----------------------------~~~V~~l~~sp~~~~i~s~s 438 (556)
.++.+ .++.|.+||+.+++..+.+.. |. ...+..|+++|+++.++.+.
T Consensus 135 yvtd~~~~~~~~i~v~d~~~g~~~r~~~~-~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~ 213 (343)
T 2qe8_A 135 YISDPAPDDKAALIRVDLQTGLAARVLQG-YPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP 213 (343)
T ss_dssp EEEECCSGGGCEEEEEETTTCCEEEECTT-CTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE
T ss_pred EEEcCccCCCCeEEEEECCCCCEEEEecC-CCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe
Confidence 56655 678999999998887776643 20 01357899999998888776
Q ss_pred ecCcCCCCeEEEEEeC----Cc--------EEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 439 QTTKTGGSILRLHTIN----AQ--------LITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 439 ~~~~~~d~~I~iwdi~----g~--------~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
. ..+.+..++.. +. .+...........++++ ++| +++++...++.|.+||..+++....
T Consensus 214 ~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d--~~G---~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 214 M----HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISID--KDH---NIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp S----SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEEC--TTC---CEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred C----CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEEC--CCC---CEEEEccCCCeEEEEECCCCCEEEE
Confidence 2 33456555532 11 01112233456778999 888 8999998999999999856664333
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEE
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIW 539 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vw 539 (556)
........+++++++++++++++.+..+.+.+|
T Consensus 285 ~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp EECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred EECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 331124568999999999988887765554333
No 233
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.74 E-value=3e-07 Score=93.96 Aligned_cols=222 Identities=9% Similarity=-0.012 Sum_probs=147.2
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe----------CCCcEEEEEeeeccCcccccccCCCeEe
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL----------TSGNILVYEYELNASTNKIEFCKPPTIL 371 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~l 371 (556)
++.|.+.|..+++.+..+..+.. + . ++++|||++++++. .++.|.+||..+. +.+..+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---------~v~~~I 125 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---------LPTADI 125 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---------CEEEEE
T ss_pred CCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---------eEEEEE
Confidence 68999999999888887775443 3 3 99999999988875 3678999998876 333443
Q ss_pred eCC-------CccEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCc
Q psy10778 372 LGH-------SACVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTK 442 (556)
Q Consensus 372 ~~h-------~~~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~ 442 (556)
.-. ...-..++++|||++++.+.. ++.|.++|+.+++.+.++.. .+. ...+....+.+++.+
T Consensus 126 ~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v---~g~--~~~~P~g~~~~~~~~---- 196 (386)
T 3sjl_D 126 ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV---PDC--YHIFPTAPDTFFMHC---- 196 (386)
T ss_dssp EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC---CSE--EEEEEEETTEEEEEE----
T ss_pred ECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC---CCc--ceeecCCCceeEEEC----
Confidence 211 123456899999998887764 68999999999999999976 231 222333345566666
Q ss_pred CCCCeEEEEEeC--CcEEEEee-c----CCCe-EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe--EEEEec----
Q psy10778 443 TGGSILRLHTIN--AQLITSLA-S----ELRI-TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA--HLLTLN---- 508 (556)
Q Consensus 443 ~~d~~I~iwdi~--g~~i~~~~-~----~~~i-~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~--~~~~~~---- 508 (556)
.||.+.+.++. ++...... . ...+ ....|.+ ++| +++. .+.+|.|++.|+.+.. .+..+.
T Consensus 197 -~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~-~dG---~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 197 -RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ-KAG---RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp -TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET-TTT---EEEE-EBTTSEEEEEECTTSSCEECCCEESSCH
T ss_pred -CCCCEEEEECCCCCeEEEeecceeccccccccccceeEc-CCC---cEEE-EeCCCEEEEEECCCCcceeecceecccc
Confidence 78888888874 44432211 1 1122 1235542 566 5544 5558999999986553 333332
Q ss_pred ----CC-CCCCeEEEEEecCCCEEEEEcC----------CCcEEEEEcCCCCCcCee
Q psy10778 509 ----TN-VALPVIAVTYSCDSQHLYASNT----------EGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 509 ----~~-h~~~V~~l~~s~dg~~l~sgs~----------Dg~V~vwdl~~~~~~~~~ 550 (556)
.+ .......++++++++.++.... .+.|.+.|+++.+.+.++
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i 327 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF 327 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEE
Confidence 00 1123345778999998888753 257999999998876655
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.73 E-value=2e-06 Score=87.73 Aligned_cols=226 Identities=8% Similarity=-0.013 Sum_probs=141.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCC--------CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPL--------GATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h--------~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
.+..++.++.|..+|.++++.+-...... ...+.+.. ..++..+++++.++.|..+|..++ +
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG---------~ 124 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDG---------T 124 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTC---------C
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCC---------C
Confidence 44455677888889988887665554321 22232222 224568888899999999998766 2
Q ss_pred CCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCe------eEEEEeCCCCeEEEEeec
Q psy10778 367 PPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPV------SHVTMSETNGEIASVLQT 440 (556)
Q Consensus 367 ~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V------~~l~~sp~~~~i~s~s~~ 440 (556)
.+................ +..++.++.++.+..+|..+|+.+..... . .++ ...... ++.++++.
T Consensus 125 ~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~--~~~~~~~~~~~~~~~--~~~v~~g~-- 195 (376)
T 3q7m_A 125 VAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNL-D--MPSLSLRGESAPTTA--FGAAVVGG-- 195 (376)
T ss_dssp EEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC-C--C-----CCCCCCEEE--TTEEEECC--
T ss_pred EEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeC-C--CCceeecCCCCcEEE--CCEEEEEc--
Confidence 222222221111111121 45788888999999999999998877665 2 222 222333 45677666
Q ss_pred CcCCCCeEEEEEeC-CcEEEEeecCCCe-----EE---EEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC
Q psy10778 441 TKTGGSILRLHTIN-AQLITSLASELRI-----TS---VTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV 511 (556)
Q Consensus 441 ~~~~d~~I~iwdi~-g~~i~~~~~~~~i-----~~---i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h 511 (556)
.++.|..+|.. |+.+......... .. +.-.+.-.+ ..+++++.+|.+..+|..+++.+.....
T Consensus 196 ---~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~v~~~~~~g~l~~~d~~tG~~~w~~~~-- 267 (376)
T 3q7m_A 196 ---DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN---GVVFALAYNGNLTALDLRSGQIMWKREL-- 267 (376)
T ss_dssp ---TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET---TEEEEECTTSCEEEEETTTCCEEEEECC--
T ss_pred ---CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC---CEEEEEecCcEEEEEECCCCcEEeeccC--
Confidence 78899999985 8887766432110 00 101100112 4677788899999999999998887762
Q ss_pred CCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 512 ALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 512 ~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
.....+... +..++.++.+|.|..+|..+++.+...
T Consensus 268 -~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 268 -GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp -CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred -CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEee
Confidence 334455443 667888888999999999887765433
No 235
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=2.4e-06 Score=87.47 Aligned_cols=189 Identities=11% Similarity=-0.031 Sum_probs=126.8
Q ss_pred cCCCCEEEEEeC--CC---cEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEc----------CCC
Q psy10778 333 APDCHTLWLGLT--SG---NILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSS----------EDG 397 (556)
Q Consensus 333 s~dg~~l~tgs~--Dg---~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs----------~Dg 397 (556)
.++++++++... .+ +|.++|..++ +.+..+.....+ .++++|+++.++.+. .++
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---------~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSG---------SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCC---------eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCC
Confidence 367777776653 22 7899998765 333445443444 899999999888875 367
Q ss_pred cEEEEeCCCCeEEEEeCCC---CC--CCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEE-eecCCCeEEE
Q psy10778 398 TCLLWDINTIGYIREIPCV---DP--NTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITS-LASELRITSV 470 (556)
Q Consensus 398 ~I~iwdl~~~~~v~~l~~~---h~--~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~-~~~~~~i~~i 470 (556)
.|.+||..+++.+.++..+ .. ......++++|||++++++... .++.|.++| . ++.+.. +..... +
T Consensus 98 ~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---~~~~v~viD-~t~~~~~~~i~~~~~---~ 170 (373)
T 2mad_H 98 YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---AGPAVGLVV-QGGSSDDQLLSSPTC---Y 170 (373)
T ss_pred eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC---CCCeEEEEE-CCCCEEeEEcCCCce---E
Confidence 8999999998888776541 00 0235589999999999988621 247899999 8 777777 654432 4
Q ss_pred EEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC----CCCCC-eEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 471 TFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT----NVALP-VIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~----~h~~~-V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.+. +++. +.+++.+.||.+.++|. +++.+..... ....+ .....+.+++..++..+.++.+.+.|+.+.
T Consensus 171 ~~~--~~~~--~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 171 HIH--PGAP--STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred EEE--eCCC--ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 445 4442 45667778999999999 8877643320 01122 233566777666555557889999998653
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.69 E-value=6.1e-06 Score=79.86 Aligned_cols=196 Identities=11% Similarity=-0.006 Sum_probs=136.4
Q ss_pred CceEEEEEcCCCCEEEEEeC--CCcEEEEEeeeccCcccccccCCCeEee-CCCccEEEEEEccCCCEEEEEcCCCcEEE
Q psy10778 325 ATIATATTAPDCHTLWLGLT--SGNILVYEYELNASTNKIEFCKPPTILL-GHSACVTDLYLCAGFSVAVSSSEDGTCLL 401 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~--Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~I~i 401 (556)
.....+++++++...++.+. ++.|+++|..++ +.+..+. +.......+++.. +.+.++.-.++.+.+
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg---------~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG---------KVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFI 90 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC---------CEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEE
T ss_pred CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC---------CEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEE
Confidence 34678999998654444443 579999999876 3333332 1112223455552 344555567899999
Q ss_pred EeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecC------CCeEEEEEee
Q psy10778 402 WDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASE------LRITSVTFSN 474 (556)
Q Consensus 402 wdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~------~~i~~i~~s~ 474 (556)
+|..+++.+.++.. . .-....++++++.++++. .++.|.++|.. .+.+..+... ..++.+.|.
T Consensus 91 iD~~t~~v~~~i~~---g-~~~g~glt~Dg~~l~vs~-----gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 91 YDRRTLSNIKNFTH---Q-MKDGWGLATDGKILYGSD-----GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EETTTTEEEEEEEC---C-SSSCCEEEECSSSEEEEC-----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EECCCCcEEEEEEC---C-CCCeEEEEECCCEEEEEC-----CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 99999999998865 2 111244667888888775 67899999997 5667766532 246778877
Q ss_pred CCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-C-----------CCCeEEEEEecCCC-EEEEEcCCCcEEEEEc
Q psy10778 475 APEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-V-----------ALPVIAVTYSCDSQ-HLYASNTEGLVIIWES 541 (556)
Q Consensus 475 ~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-h-----------~~~V~~l~~s~dg~-~l~sgs~Dg~V~vwdl 541 (556)
+| .+.+....++.|.+.|..+++.+..+..+ . ......|+++|+++ +++++...+.+.+.++
T Consensus 161 --dg---~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 161 --NG---EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp --TT---EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred --CC---EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 56 66666667899999999999999988741 0 13568999999985 5566777899999998
Q ss_pred CCCC
Q psy10778 542 SSHN 545 (556)
Q Consensus 542 ~~~~ 545 (556)
....
T Consensus 236 ~~~~ 239 (266)
T 2iwa_A 236 HLVR 239 (266)
T ss_dssp EECC
T ss_pred eccc
Confidence 7643
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.67 E-value=3.2e-05 Score=74.68 Aligned_cols=207 Identities=9% Similarity=-0.084 Sum_probs=135.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEee-
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILL- 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~- 372 (556)
+..+...++.|..++..+......+. ........+++++++..|+.+ ...+.|.+++.+.. ....+.
T Consensus 50 ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~----------~~~~~~~ 118 (267)
T 1npe_A 50 VYWTDISEPSIGRASLHGGEPTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT----------QRRVLFD 118 (267)
T ss_dssp EEEEETTTTEEEEEESSSCCCEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC----------SCEEEEC
T ss_pred EEEEECCCCEEEEEecCCCCcEEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC----------CEEEEEE
Confidence 44455567889999987655433332 233567899999976655555 45678888887532 112222
Q ss_pred CCCccEEEEEEccCCCEEEEEcC---CCcEEEEeCCCCeEEEEeC-CCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSE---DGTCLLWDINTIGYIREIP-CVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~---Dg~I~iwdl~~~~~v~~l~-~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
........++++|++..|..+.. .+.|..+++.. +....+. . . -.....++++++++.|..+.. ..+.|
T Consensus 119 ~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~-~-~~~P~gia~d~~~~~lyv~d~----~~~~I 191 (267)
T 1npe_A 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQD-N-LGLPNGLTFDAFSSQLCWVDA----GTHRA 191 (267)
T ss_dssp SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECT-T-CSCEEEEEEETTTTEEEEEET----TTTEE
T ss_pred CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEEC-C-CCCCcEEEEcCCCCEEEEEEC----CCCEE
Confidence 22245689999996655544443 46888888763 3333332 2 2 356889999998887776653 56899
Q ss_pred EEEEeCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCC
Q psy10778 449 RLHTINAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 449 ~iwdi~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
..+|.++.....+ ........++.. ++ .++++...++.|..+|..+++.+..+..+.......+++.|++.
T Consensus 192 ~~~~~~g~~~~~~~~~~~~P~gi~~d---~~---~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 192 ECLNPAQPGRRKVLEGLQYPFAVTSY---GK---NLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEETTEEEEEEEEECCCSEEEEEEE---TT---EEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEecCCCceEEEecCCCCceEEEEe---CC---EEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999986443333 333455677654 34 56666667789999999999999998743233578888888864
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.65 E-value=6.8e-06 Score=83.67 Aligned_cols=224 Identities=9% Similarity=0.019 Sum_probs=141.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
.+..++.++.|..+|.++++......... ........ .+..+++++.++.|..+|..++. .+......
T Consensus 105 ~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~---------~~W~~~~~ 172 (376)
T 3q7m_A 105 HVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGA---------VKWTVNLD 172 (376)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCC---------EEEEEECC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCc---------EEEEEeCC
Confidence 56667889999999999888765554321 11111112 24578888889999999987652 11222111
Q ss_pred CccE-----EEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCC---------e-eEEEEeCCCCeEEEEee
Q psy10778 375 SACV-----TDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTP---------V-SHVTMSETNGEIASVLQ 439 (556)
Q Consensus 375 ~~~V-----~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~---------V-~~l~~sp~~~~i~s~s~ 439 (556)
.... ...... +..++.++.+|.+..+|..+++.+..... ..... + ....+ .++.+++++
T Consensus 173 ~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~- 246 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV--VNGVVFALA- 246 (376)
T ss_dssp C-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE--ETTEEEEEC-
T ss_pred CCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE--ECCEEEEEe-
Confidence 1100 111111 45677888899999999999988776653 10000 1 11111 246677776
Q ss_pred cCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEE
Q psy10778 440 TTKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAV 518 (556)
Q Consensus 440 ~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l 518 (556)
.++.+..+|.. |+.+...... ...++... + ..+++++.+|.|..+|..+++.+..........+...
T Consensus 247 ----~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~----~---~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 247 ----YNGNLTALDLRSGQIMWKRELG-SVNDFIVD----G---NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp ----TTSCEEEEETTTCCEEEEECCC-CEEEEEEE----T---TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred ----cCcEEEEEECCCCcEEeeccCC-CCCCceEE----C---CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 78899999996 8877665433 34444443 3 4677888899999999999998877752112223333
Q ss_pred EEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 519 TYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 519 ~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
... +..|+.++.+|.|+++|..+++.+..+
T Consensus 315 ~~~--~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 315 VLY--NGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EEE--TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEE--CCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 333 567888999999999999987765443
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.48 E-value=5.4e-06 Score=88.42 Aligned_cols=191 Identities=8% Similarity=0.048 Sum_probs=135.8
Q ss_pred CCCEEEEEeC-CCcEEEEEeeeccCcccccccCCCeEeeC-CCccEEEEEE-c-cCCCEEEEEc----------------
Q psy10778 335 DCHTLWLGLT-SGNILVYEYELNASTNKIEFCKPPTILLG-HSACVTDLYL-C-AGFSVAVSSS---------------- 394 (556)
Q Consensus 335 dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~-s-~~~~~l~sgs---------------- 394 (556)
||++++.... ++.|.+.|+.+. +..+.+.- .......+++ + |++++++.++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~---------~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVM---------KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT---------EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CCCEEEEEcCCCCEEEEEECCCc---------eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 7888877665 456999898875 33333321 2245778887 5 8999888874
Q ss_pred --CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC-----------------------------
Q psy10778 395 --EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT----------------------------- 443 (556)
Q Consensus 395 --~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~----------------------------- 443 (556)
.++.+.+.|..+++.+.++.- .+....++++|+|+++++.+.+...
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~V---gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLV---SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred cccCceEEEEECCCCeEEEEEEe---CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 246799999999999888875 3456788999999999998854300
Q ss_pred ----CCCeEEEEEeCC---cE-EEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe------------E
Q psy10778 444 ----GGSILRLHTINA---QL-ITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA------------H 503 (556)
Q Consensus 444 ----~d~~I~iwdi~g---~~-i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~------------~ 503 (556)
.-+.|.+.|... +. +..+.......++.++ |||. .+++++..+.+|.++|+.+.+ .
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~s--PDGk--~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMA--PDKK--HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEEC--TTSS--EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEc--CCCC--EEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 012366666652 33 4555555677889999 9993 344555578999999998653 4
Q ss_pred EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 504 LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 504 ~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
+..+. -......++|+++|...++.-.|+.|.+||+.+
T Consensus 324 ~~~v~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPE--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCB--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEcC--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 55555 346789999999995445666799999999976
No 240
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.47 E-value=0.00059 Score=67.81 Aligned_cols=230 Identities=9% Similarity=-0.021 Sum_probs=144.6
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEE
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDL 381 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l 381 (556)
+.|+..++.+......+. ....+.+++|++++..|+.+ ..++.|..++...... +. .....+........++
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~-~~----~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG-VS----SYDTVISRDIQAPDGL 82 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------CEEEECSSCSCCCEE
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC-Cc----ccEEEEeCCCCCcCEE
Confidence 568888888766555543 34567899999876555554 4568888888765100 00 1111222223455788
Q ss_pred EEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEE
Q psy10778 382 YLCAGF-SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITS 460 (556)
Q Consensus 382 ~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~ 460 (556)
++.+.+ .+.++-...+.|.+.|+........+.. . ......++++|.++.|..+... ..+.|..++.+|.....
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~-~~~P~~iavdp~~g~ly~~d~~---~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N-GSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-T-TCCEEEEEEETTTTEEEEEECS---SSCEEEEEETTSCCEEE
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-C-CCCcceEEeCCCCCEEEEEccC---CCCeEEEEcCCCCCeEE
Confidence 998654 4556667788999999875433333332 2 4568999999988877766510 12689889998766554
Q ss_pred ee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC--CCCCCeEEEEEecCCCEEEEEcCCCcE
Q psy10778 461 LA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT--NVALPVIAVTYSCDSQHLYASNTEGLV 536 (556)
Q Consensus 461 ~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~Dg~V 536 (556)
+. .-.....++++ +++. ++.++-...+.|..+|+.. ...+.+.. .......++++. .+.++++....++|
T Consensus 158 ~~~~~~~~P~gla~d--~~~~--~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 158 LVTENIQWPNGITLD--LLSG--RLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 231 (316)
T ss_dssp EECSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred EEECCCCCceEEEEe--ccCC--EEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence 42 23567899999 6551 5556666778999999853 32233321 123456788886 45666666778899
Q ss_pred EEEEcCCCCCcCee
Q psy10778 537 IIWESSSHNRTPKF 550 (556)
Q Consensus 537 ~vwdl~~~~~~~~~ 550 (556)
..++..+++....+
T Consensus 232 ~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 232 FSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcceEEE
Confidence 99998776554443
No 241
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.47 E-value=2.2e-06 Score=88.96 Aligned_cols=188 Identities=13% Similarity=0.042 Sum_probs=128.5
Q ss_pred CCCCEEEEEeCC-----CcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEc----------CCCc
Q psy10778 334 PDCHTLWLGLTS-----GNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSS----------EDGT 398 (556)
Q Consensus 334 ~dg~~l~tgs~D-----g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs----------~Dg~ 398 (556)
++++.+++.... +.|.++|..+. +.+..+..-..+ .++++|+++.++.+. .++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~---------~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG---------RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT---------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC---------EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCE
Confidence 466666665542 68999998776 444555544455 899999999777765 4678
Q ss_pred EEEEeCCCCeEEEEeCCC-CC----CCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEE
Q psy10778 399 CLLWDINTIGYIREIPCV-DP----NTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASELRITSVTF 472 (556)
Q Consensus 399 I~iwdl~~~~~v~~l~~~-h~----~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~ 472 (556)
|.++|..+++.+.++..+ .. ......++++|||++++++... .++.|.++|+. ++.+.++..... ...
T Consensus 151 VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---~~~~VsVID~~t~kvv~~I~v~g~---~~~ 224 (426)
T 3c75_H 151 VEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---PAPAVGVVDLEGKTFDRMLDVPDC---YHI 224 (426)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS---SSCEEEEEETTTTEEEEEEECCSE---EEE
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC---CCCeEEEEECCCCeEEEEEEcCCc---eee
Confidence 999999999998877530 00 1245678999999999988620 25789999997 777777765432 223
Q ss_pred eeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE----ecCCCCCCe-EEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 473 SNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT----LNTNVALPV-IAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 473 s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~----~~~~h~~~V-~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
. |++. +.+++.+.||++.+.+..+++.... +..+ ..++ ..+.+++++..++..+..|.|.+.|+.+
T Consensus 225 ~--p~g~--~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~-~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 225 F--PASP--TVFYMNCRDGSLARVDFADGETKVTNTEVFHTE-DELLINHPAFSLRSGRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp E--EEET--TEEEEEETTSSEEEEECCTTCCEEEECCCCSCT-TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS
T ss_pred c--cCCC--cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC-CCceeeEeeecCCCCEEEEEeCCCcEEEEeccC
Confidence 3 3332 4566667788888888766655432 2211 1221 2457899998888888889999999865
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=2e-05 Score=75.45 Aligned_cols=180 Identities=10% Similarity=0.079 Sum_probs=122.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCC--cEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEE-EcCCCcEEE
Q psy10778 325 ATIATATTAPDCHTLWLGLTSG--NILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVS-SSEDGTCLL 401 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg--~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s-gs~Dg~I~i 401 (556)
.-...+.|+ ++.+..+++.+| .|+++|+.++ +.+..+... .........++++.|.. .-.++.+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg---------kv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v 111 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG---------KTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFV 111 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC---------CEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCC---------cEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEE
Confidence 345788888 666666777666 8999998876 333333322 22222222233444444 446899999
Q ss_pred EeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecC------CCeEEEEEee
Q psy10778 402 WDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASE------LRITSVTFSN 474 (556)
Q Consensus 402 wdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~------~~i~~i~~s~ 474 (556)
+|..+++.+.++.. . . ....++++++.++.+. .++.|.++|.. .+.+..+... ..++.+.|.
T Consensus 112 ~D~~t~~~~~ti~~-~--~--eG~glt~dg~~L~~Sd-----Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 112 WNIRNLRQVRSFNY-D--G--EGWGLTHNDQYLIMSD-----GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp EETTTCCEEEEEEC-S--S--CCCCEEECSSCEEECC-----SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred EECccCcEEEEEEC-C--C--CceEEecCCCEEEEEC-----CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 99999999999886 3 2 2234446778777765 57889999987 6777776531 345567776
Q ss_pred CCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-C----------CCCeEEEEEecCCCEEEEEc
Q psy10778 475 APEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-V----------ALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 475 ~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-h----------~~~V~~l~~s~dg~~l~sgs 531 (556)
+| .+.+....++.|.+.|..+++.+..+... . ......||++|+++.|++.+
T Consensus 181 --~G---~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 181 --DG---EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp --TT---EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred --CC---EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 57 66666667889999999999999888741 0 13568999999877666555
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=2.5e-05 Score=74.90 Aligned_cols=181 Identities=10% Similarity=0.022 Sum_probs=124.8
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI 404 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl 404 (556)
.....+.++. +.+.++.+.+|.|+++|+.++ +.+..+......--.+++.. +++.++.-.++.+.++|.
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tg---------kv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESA---------QPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCS---------SCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEET
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCC---------cEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEEC
Confidence 4456788873 566777788899999999887 44444411111122344432 344555557899999999
Q ss_pred CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecC------CCeEEEEEeeCCC
Q psy10778 405 NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASE------LRITSVTFSNAPE 477 (556)
Q Consensus 405 ~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~------~~i~~i~~s~~pd 477 (556)
.+++.+.++.. . ..-..++ ++++.++.+. .++.|.++|.. .+.+..+... ..++.+.|. +
T Consensus 124 ~Tl~~~~ti~~-~--~eGwGLt--~Dg~~L~vSd-----Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~---d 190 (268)
T 3nok_A 124 MPPQRERTTRY-S--GEGWGLC--YWNGKLVRSD-----GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA---N 190 (268)
T ss_dssp TTTEEEEEEEC-S--SCCCCEE--EETTEEEEEC-----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE---T
T ss_pred CcCcEEEEEeC-C--CceeEEe--cCCCEEEEEC-----CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe---C
Confidence 99999999886 2 3223343 5678888776 68899999987 6777776531 255777876 6
Q ss_pred CCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC------------CCCCeEEEEEecCC-CEEEEEcC
Q psy10778 478 GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN------------VALPVIAVTYSCDS-QHLYASNT 532 (556)
Q Consensus 478 g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~s~dg-~~l~sgs~ 532 (556)
| .+.+....+..|.+.|..+++.+..+... .....+.||++|++ ++++||-.
T Consensus 191 G---~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 191 G---VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp T---EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred C---EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 7 66666667889999999999999888741 12357899999976 45555543
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.44 E-value=0.0001 Score=73.27 Aligned_cols=222 Identities=10% Similarity=-0.077 Sum_probs=135.9
Q ss_pred EEeccCCCeEEEEeCCCCCCcceEcCC------------------CCCceEEEEEcC-CCCEEEEEeCCCcEEEEEeeec
Q psy10778 296 ICWNECDNLIRLKMSKELPATPVIRPP------------------LGATIATATTAP-DCHTLWLGLTSGNILVYEYELN 356 (556)
Q Consensus 296 l~~gs~Dg~I~lw~~~~~~~~~~~~~~------------------h~~~V~~i~~s~-dg~~l~tgs~Dg~I~vwd~~~~ 356 (556)
+.++..++.|..|+..++......... ....+..+++.+ ++ .|+++...+.|..++...+
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~~g 111 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCYYHLSVVGSEGG 111 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETTTEEEEECTTCE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECCCCEEEEeCCCC
Confidence 444556777887877654332211100 013578899997 55 4555554455777765432
Q ss_pred cCcccccccCCCeEee----C-CCccEEEEEEcc-CCCEEEEEcC-----------------CCcEEEEeCCCCeEEEEe
Q psy10778 357 ASTNKIEFCKPPTILL----G-HSACVTDLYLCA-GFSVAVSSSE-----------------DGTCLLWDINTIGYIREI 413 (556)
Q Consensus 357 ~~~~~~~~~~~~~~l~----~-h~~~V~~l~~s~-~~~~l~sgs~-----------------Dg~I~iwdl~~~~~v~~l 413 (556)
. +..+. + .......+++.+ +|.+.++-.. +|.|..+|..+++.....
T Consensus 112 ~----------~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 112 H----------ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp E----------CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred E----------EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 0 11111 1 123467899999 9987776533 367889998776543332
Q ss_pred CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc---EEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeC
Q psy10778 414 PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ---LITSL-ASELRITSVTFSNAPEGVSQNVIVTGHS 489 (556)
Q Consensus 414 ~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~---~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~ 489 (556)
.. ......++++++++.+..+.. ..+.|..|++++. ....+ ...+ ...+++. ++| ++.++...
T Consensus 182 ~~---~~~p~gia~~~dg~~lyv~d~----~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d--~~G---~l~va~~~ 248 (322)
T 2fp8_A 182 KE---LHVPGGAEVSADSSFVLVAEF----LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRN--ADG---HFWVSSSE 248 (322)
T ss_dssp EE---ESCCCEEEECTTSSEEEEEEG----GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEEC--TTS---CEEEEEEE
T ss_pred cC---CccCcceEECCCCCEEEEEeC----CCCeEEEEECCCCcCCccceEEeCCC-CCCeEEC--CCC---CEEEEecC
Confidence 22 234567999999987766642 5678999998741 11111 2233 7888888 888 66666544
Q ss_pred ----------CCeEEEEeCCCCeEEEEecCCC---CCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 490 ----------DGTIQLWSGYKLAHLLTLNTNV---ALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 490 ----------dg~I~iwd~~~~~~~~~~~~~h---~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
.+.|..+|. .++.+..+.... -..++++++ .+++++++...++.|.++++..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467888886 577777776321 245677776 4666666666788999999865
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.42 E-value=3.4e-05 Score=83.55 Aligned_cols=242 Identities=11% Similarity=0.034 Sum_probs=142.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCC---CceEE-EEEcCCCCEEEEEeC------CCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLG---ATIAT-ATTAPDCHTLWLGLT------SGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~---~~V~~-i~~s~dg~~l~tgs~------Dg~I~vwd~~~~~~~~~~~~ 364 (556)
.+..++.|+.|..+|.++++.+-....... ..+.+ .... + ..+++++. +|.|..+|..++...-+...
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 666778899999999999987765543210 01211 1111 3 45666654 68898888876521100000
Q ss_pred cCCCeE------------e-----------------eCCCccEEEEEEccCCCEEEEEcCC----------------CcE
Q psy10778 365 CKPPTI------------L-----------------LGHSACVTDLYLCAGFSVAVSSSED----------------GTC 399 (556)
Q Consensus 365 ~~~~~~------------l-----------------~~h~~~V~~l~~s~~~~~l~sgs~D----------------g~I 399 (556)
...... + .+....-..+++.++...+..++.+ +.|
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v 274 (571)
T 2ad6_A 195 TGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTI 274 (571)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEE
T ss_pred CCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEE
Confidence 000000 0 0000001135566666666666532 359
Q ss_pred EEEeCCCCeEEEEeCCC-CCCC----CeeE---EEEeCCCC---eEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC--
Q psy10778 400 LLWDINTIGYIREIPCV-DPNT----PVSH---VTMSETNG---EIASVLQTTKTGGSILRLHTIN-AQLITSLASEL-- 465 (556)
Q Consensus 400 ~iwdl~~~~~v~~l~~~-h~~~----~V~~---l~~sp~~~---~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~-- 465 (556)
..+|..+|+.+..+... | .. .+.. +....+|+ .++.++ .+|.++++|.. |+++.......
T Consensus 275 ~Ald~~tG~~~W~~~~~~~-d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~-----~~G~l~~lD~~tG~~~w~~~~~~~~ 348 (571)
T 2ad6_A 275 WGRDLDTGMAKWGYQKTPH-DEWDFAGVNQMVLTDQPVNGKMTPLLSHID-----RNGILYTLNRENGNLIVAEKVDPAV 348 (571)
T ss_dssp EEEETTTCCEEEEEESSTT-CSSCCCCCCCCEEEEEEETTEEEEEEEEEC-----TTSEEEEEETTTCCEEEEEESSTTC
T ss_pred EEEecCCCcEEEEecCCCC-cccccccCCCCEEEecccCCcEEEEEEEeC-----CCcEEEEEECCCCCEEeeecccCCc
Confidence 99999999988766430 1 11 1111 22224564 455666 78999999986 88877654321
Q ss_pred ------------Ce--------------------------EEEEEeeCCCCCcceEEEEEe-------------------
Q psy10778 466 ------------RI--------------------------TSVTFSNAPEGVSQNVIVTGH------------------- 488 (556)
Q Consensus 466 ------------~i--------------------------~~i~~s~~pdg~~~~~l~tg~------------------- 488 (556)
++ ..++++ |+. .++++..
T Consensus 349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d--p~~---g~~yv~~~~~~~~~~~~~~~~~~g~~ 423 (571)
T 2ad6_A 349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYD--PES---RTLYAGLNHICMDWEPFMLPYRAGQF 423 (571)
T ss_dssp CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE--TTT---TEEEEEEECEEEEEEECCCCCCTTSC
T ss_pred cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceEC--CCC---CEEEEEchhccccccccccccccCCc
Confidence 11 134566 554 3454432
Q ss_pred ------------------CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 489 ------------------SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 489 ------------------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
.+|.|..||..+++.+.++.. ...+.+..+...+..++.++.||.|++||.++++.+.++
T Consensus 424 ~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 424 FVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE--KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC--CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 357899999999999888863 233333334445677888999999999999998887665
Q ss_pred e
Q psy10778 551 L 551 (556)
Q Consensus 551 ~ 551 (556)
.
T Consensus 502 ~ 502 (571)
T 2ad6_A 502 K 502 (571)
T ss_dssp E
T ss_pred e
Confidence 4
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.40 E-value=2e-05 Score=87.08 Aligned_cols=242 Identities=10% Similarity=0.068 Sum_probs=147.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCC---CceEE-EEEcCCCCEEEEEeC------CCcEEEEEeeeccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLG---ATIAT-ATTAPDCHTLWLGLT------SGNILVYEYELNASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~---~~V~~-i~~s~dg~~l~tgs~------Dg~I~vwd~~~~~~~~~~~~ 364 (556)
.+..++.|+.|..+|.++++.+-....... ..+.+ ... .+ ..++++.. +|.|..+|..++...-....
T Consensus 119 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 677788899999999999987766654211 11111 011 13 35555543 57888888776521100000
Q ss_pred --cCCCeE------------e--------eCCCccEEEEEEccCCCEEEEEcCCC-------------------cEEEEe
Q psy10778 365 --CKPPTI------------L--------LGHSACVTDLYLCAGFSVAVSSSEDG-------------------TCLLWD 403 (556)
Q Consensus 365 --~~~~~~------------l--------~~h~~~V~~l~~s~~~~~l~sgs~Dg-------------------~I~iwd 403 (556)
..+... . .++......+++.++..+++.++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 000000 0 01111123467888888888888776 399999
Q ss_pred CCCCeEEEEeCCC-CCC-------CCeeEEEEeCCCC---eEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC------
Q psy10778 404 INTIGYIREIPCV-DPN-------TPVSHVTMSETNG---EIASVLQTTKTGGSILRLHTIN-AQLITSLASEL------ 465 (556)
Q Consensus 404 l~~~~~v~~l~~~-h~~-------~~V~~l~~sp~~~---~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~------ 465 (556)
..+|+.+..+... | . .+.....+..+++ .++.++ .+|.++++|.. |+++.......
T Consensus 277 ~~tG~~~W~~~~~~~-~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~-----~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPG-DSWDFTATQQITLAELNIDGKPRKVLMQAP-----KNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp TTTCCEEEEEESSTT-CCSCCCCCSCEEEEEEEETTEEEEEEEECC-----TTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred CCCCceeeEeecCCC-ccccccCCCCcEEEEeccCCcEEEEEEEEC-----CCCEEEEEECCCCCEeccccccccccccc
Confidence 9999988766531 2 1 2333333334554 466666 89999999986 88875432111
Q ss_pred -------C------------------------eEEEEEeeCCCCCcceEEEEE---------------------------
Q psy10778 466 -------R------------------------ITSVTFSNAPEGVSQNVIVTG--------------------------- 487 (556)
Q Consensus 466 -------~------------------------i~~i~~s~~pdg~~~~~l~tg--------------------------- 487 (556)
. -..++++ |+. .++++.
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~d--p~~---g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFN--PGT---GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEE--TTT---TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceEC--CCC---CEEEEeccccceEeeeeccccccccccccCccc
Confidence 0 0125566 443 333321
Q ss_pred ---------eCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 488 ---------HSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 488 ---------~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
..+|.|..||+.+++.+.+... ..+.....+...+.++++++.||.|++||.++++.+..+.
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKVPY--PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEccC--CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 1248899999999999888763 2344444556678899999999999999999988776553
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.37 E-value=7.5e-05 Score=82.46 Aligned_cols=234 Identities=12% Similarity=0.102 Sum_probs=146.0
Q ss_pred CCeEEEEeCCCCCCcceEcCCC-C-----------------------------CceEEEEEcCCCCEEEEEeCCCc----
Q psy10778 302 DNLIRLKMSKELPATPVIRPPL-G-----------------------------ATIATATTAPDCHTLWLGLTSGN---- 347 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h-~-----------------------------~~V~~i~~s~dg~~l~tgs~Dg~---- 347 (556)
+|.|+.+|.++++.+-.+.... . .....+++.++...++.++.++.
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999998776654311 0 01124678888888988887663
Q ss_pred ---------------EEEEEeeeccCcccccccCCCeEeeC--CC-------ccEEEEEEccCCC---EEEEEcCCCcEE
Q psy10778 348 ---------------ILVYEYELNASTNKIEFCKPPTILLG--HS-------ACVTDLYLCAGFS---VAVSSSEDGTCL 400 (556)
Q Consensus 348 ---------------I~vwd~~~~~~~~~~~~~~~~~~l~~--h~-------~~V~~l~~s~~~~---~l~sgs~Dg~I~ 400 (556)
|..+|..++ +.+-.... |. .+.....+..+|+ .++.++.+|.+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG---------~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~ 327 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTG---------KLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFY 327 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTC---------CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCC---------ceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEE
Confidence 777777665 22222221 21 2333333334665 688999999999
Q ss_pred EEeCCCCeEEEEeCCCCC-----------CCC------------------------eeEEEEeCCCCeEEEEeec-----
Q psy10778 401 LWDINTIGYIREIPCVDP-----------NTP------------------------VSHVTMSETNGEIASVLQT----- 440 (556)
Q Consensus 401 iwdl~~~~~v~~l~~~h~-----------~~~------------------------V~~l~~sp~~~~i~s~s~~----- 440 (556)
++|..+|+.+...+. .+ ..+ -..++++|+.+.+.+....
T Consensus 328 ~lD~~tG~~l~~~~~-~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~ 406 (668)
T 1kv9_A 328 VLDRTNGKLISAEKF-GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVY 406 (668)
T ss_dssp EEETTTCCEEEEEES-SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEE
T ss_pred EEECCCCCEeccccc-cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEe
Confidence 999999998754332 10 000 0126788887776653210
Q ss_pred --------------------------CcCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeE
Q psy10778 441 --------------------------TKTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTI 493 (556)
Q Consensus 441 --------------------------~~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I 493 (556)
....++.|..||++ |+.+.............+. ..+ .++++|+.||.|
T Consensus 407 ~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~--t~g---g~vf~g~~dg~l 481 (668)
T 1kv9_A 407 RNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLS--TAG---NLVFQGTAAGQM 481 (668)
T ss_dssp CCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEE--ETT---TEEEEECTTSEE
T ss_pred eeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeE--eCC---CEEEEECCcccc
Confidence 00124789999986 8888777655544443444 344 588889999999
Q ss_pred EEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEE-EEEcC--------------------CCcEEEEEcCCCCCcCee
Q psy10778 494 QLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHL-YASNT--------------------EGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 494 ~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l-~sgs~--------------------Dg~V~vwdl~~~~~~~~~ 550 (556)
+.||..+++.+..+..+....-.-+.+..+|+.. +.++. .+.|.++.+......|.+
T Consensus 482 ~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~p~~ 559 (668)
T 1kv9_A 482 HAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLPPP 559 (668)
T ss_dssp EEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCCCC
T ss_pred hhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCccCCCCCC
Confidence 9999999999998874321111233445677643 33332 347888888765444443
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.37 E-value=2.7e-05 Score=75.27 Aligned_cols=160 Identities=8% Similarity=-0.015 Sum_probs=114.3
Q ss_pred cEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 377 CVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
....+.+++++.+.++.+. ++.|.+.|+.+++.++++.. ........+++. ++.+..+.. .++.+.++|..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~~~fgeGi~~~--g~~lyv~t~----~~~~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-DDSYFGEGLTLL--NEKLYQVVW----LKNIGFIYDRR 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CTTCCEEEEEEE--TTEEEEEET----TCSEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-CCCcceEEEEEe--CCEEEEEEe----cCCEEEEEECC
Confidence 4689999998766665543 68999999999999998765 202223345554 566766653 78999999997
Q ss_pred -CcEEEEeecC-CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC-C---CCeEEEEEecCCCEEE
Q psy10778 455 -AQLITSLASE-LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV-A---LPVIAVTYSCDSQHLY 528 (556)
Q Consensus 455 -g~~i~~~~~~-~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h-~---~~V~~l~~s~dg~~l~ 528 (556)
.+.+.++... .. ...++ ++| ..++++..++.|.++|..+.+.+..+..+. . ..+..+.|. +|+..+
T Consensus 95 t~~v~~~i~~g~~~--g~glt--~Dg---~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyv 166 (266)
T 2iwa_A 95 TLSNIKNFTHQMKD--GWGLA--TDG---KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWA 166 (266)
T ss_dssp TTEEEEEEECCSSS--CCEEE--ECS---SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred CCcEEEEEECCCCC--eEEEE--ECC---CEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEE
Confidence 7888888654 22 23344 456 455556678999999999999888887421 1 236788888 776555
Q ss_pred EEcCCCcEEEEEcCCCCCcCeee
Q psy10778 529 ASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 529 sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
....++.|.+.|..+++.+..+.
T Consensus 167 n~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 167 NIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp EETTSSEEEEEETTTCCEEEEEE
T ss_pred ecCCCCeEEEEECCCCcEEEEEE
Confidence 55568899999999988766554
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.34 E-value=0.00024 Score=72.80 Aligned_cols=232 Identities=7% Similarity=-0.047 Sum_probs=146.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+|..+. .+.|+..+..+........ ....+..++|.+.+..|+.+ ...+.|..++.... .....+..
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---------~~~~~~~~ 156 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---------NVEEVVST 156 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------CEEEEECS
T ss_pred eeEeec-CccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---------CcEEEEeC
Confidence 444433 3567888887665544443 34567899999765555544 45677877776543 11112222
Q ss_pred CCccEEEEEEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCC-CeEEEE
Q psy10778 374 HSACVTDLYLCAGF-SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGG-SILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d-~~I~iw 451 (556)
.......+++.+.+ .+.++-...+.|.+.++........+.. . -.....++++|.++.|..+.. .. +.|..+
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~-~-l~~P~giavdp~~g~ly~td~----~~~~~I~r~ 230 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ-S-LEKPRAIALHPMEGTIYWTDW----GNTPRIEAS 230 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS-S-CSCEEEEEEETTTTEEEEEEC----SSSCEEEEE
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC-C-CCCCcEEEEEcCCCeEEEecc----CCCCEEEEE
Confidence 23345678888754 4556666678888888874433333333 2 467899999998887776652 33 789889
Q ss_pred EeCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 452 TINAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 452 di~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
+.+|.....+. .-.....++++ +++. ++.++-+..+.|..+|+........+. .......+|++ .++.++++
T Consensus 231 ~~dG~~~~~~~~~~~~~PnGlavd--~~~~--~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 231 SMDGSGRRIIADTHLFWPNGLTID--YAGR--RMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEE--GGGT--EEEEEETTTTEEEEECTTSCSCEEEEC-SSCSSEEEEEE-ETTEEEEE
T ss_pred eCCCCCcEEEEECCCCCeeeEEEe--CCCC--EEEEEECCCCEEEEEeCCCCeeEEEEE-CCCCCceEEEE-ECCEEEEe
Confidence 98876544442 23467899999 5441 566666677899999975433322333 23456788888 45566667
Q ss_pred EcCCCcEEEEEcCCCCCcCee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~ 550 (556)
....+.|..++..+++....+
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEE
T ss_pred eCCCCeEEEEECCCCcceEEE
Confidence 777889999996666554443
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.34 E-value=0.00045 Score=69.75 Aligned_cols=226 Identities=8% Similarity=-0.059 Sum_probs=143.0
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 380 (556)
.+.|+..+.........+. ....+..++|++.+..|+.+ ...+.|..++.... .....+.........
T Consensus 52 ~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---------~~~~~~~~~~~~p~g 120 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS---------NVEEVVSTGLESPGG 120 (349)
T ss_dssp BSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECSSCSCCCE
T ss_pred ccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEeccCCceEEEecCCC---------CceEEEeCCCCCccE
Confidence 3457777776554433332 33457899999766666554 45677877776643 111222223344578
Q ss_pred EEEccCC-CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCC-CeEEEEEeCCcEE
Q psy10778 381 LYLCAGF-SVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGG-SILRLHTINAQLI 458 (556)
Q Consensus 381 l~~s~~~-~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d-~~I~iwdi~g~~i 458 (556)
+++.+.+ .+.++-...+.|.+.++........+.. . -.....++++|.++.|..+.. .. +.|..++.+|...
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~-~-l~~P~~iavdp~~g~ly~td~----~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ-S-LEKPRAIALHPMEGTIYWTDW----GNTPRIEASSMDGSGR 194 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT-T-CSCEEEEEEETTTTEEEEEEC----SSSCEEEEEETTSCSC
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC-C-CCCcceEEEecCcCeEEEecc----CCCCEEEEEeCCCCCc
Confidence 8998754 4556666778899999875433333333 2 466899999998777776652 34 7899999887654
Q ss_pred EEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcE
Q psy10778 459 TSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLV 536 (556)
Q Consensus 459 ~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V 536 (556)
..+. .-.....++++ +++. ++.++-...+.|..+|+........+. .......++++ .++.++++-...+.|
T Consensus 195 ~~~~~~~~~~PnGla~d--~~~~--~lY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~giav-~~~~ly~td~~~~~V 268 (349)
T 3v64_C 195 RIIADTHLFWPNGLTID--YAGR--RMYWVDAKHHVIERANLDGSHRKAVIS-QGLPHPFAITV-FEDSLYWTDWHTKSI 268 (349)
T ss_dssp EESCCSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred EEEEECCCCCcceEEEe--CCCC--EEEEEECCCCEEEEEeCCCCceEEEEe-CCCCCceEEEE-ECCEEEEecCCCCeE
Confidence 4442 23467899999 6541 556666677899999975433222232 23456788888 455666666678889
Q ss_pred EEEEcCCCCCcCee
Q psy10778 537 IIWESSSHNRTPKF 550 (556)
Q Consensus 537 ~vwdl~~~~~~~~~ 550 (556)
..++..+++....+
T Consensus 269 ~~~~~~~G~~~~~i 282 (349)
T 3v64_C 269 NSANKFTGKNQEII 282 (349)
T ss_dssp EEEETTTCCSCEEE
T ss_pred EEEEccCCCccEEe
Confidence 98886666554443
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.34 E-value=0.00025 Score=67.21 Aligned_cols=181 Identities=7% Similarity=0.021 Sum_probs=121.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCC--cEEEEEeeeccCcccccccCCCeEeeCCCcc-EEEEEEccCCCEEEEEcCCCcEE
Q psy10778 324 GATIATATTAPDCHTLWLGLTSG--NILVYEYELNASTNKIEFCKPPTILLGHSAC-VTDLYLCAGFSVAVSSSEDGTCL 400 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg--~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~-V~~l~~s~~~~~l~sgs~Dg~I~ 400 (556)
......+.|+. +.+..+.+.+| .|+++|+.++ +.+..+.-.... --.++.. .+++.+..-.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg---------kv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG---------RILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGF 88 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC---------CEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCC---------CEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEE
Confidence 34566888886 55566666654 8999999876 333333322211 1233333 234444556789999
Q ss_pred EEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecC------CCeEEEEEe
Q psy10778 401 LWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASE------LRITSVTFS 473 (556)
Q Consensus 401 iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~------~~i~~i~~s 473 (556)
++|..+++.+.++.. . ..-..+ +++++.++.+. .++.|.++|.. .+.+.++... ..++.+.+.
T Consensus 89 v~D~~tl~~~~ti~~-~--~~Gwgl--t~dg~~L~vSd-----gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 89 VYDLATLTPRARFRY-P--GEGWAL--TSDDSHLYMSD-----GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EEETTTTEEEEEEEC-S--SCCCEE--EECSSCEEEEC-----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEECCcCcEEEEEeC-C--CCceEE--eeCCCEEEEEC-----CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 999999999999986 3 322334 46777777776 67899999987 6777776532 456677776
Q ss_pred eCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC------------CCCCeEEEEEecCCCEEEEEc
Q psy10778 474 NAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN------------VALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 474 ~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~------------h~~~V~~l~~s~dg~~l~sgs 531 (556)
+| ++.+....+..|.+.|..+++.+..+... .....+.|+++|+++.|++.+
T Consensus 159 ---~G---~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 159 ---NG---ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ---TT---EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ---CC---EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 66 66666667889999999999999888741 123568999999775555443
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.32 E-value=2.7e-06 Score=84.53 Aligned_cols=210 Identities=10% Similarity=0.037 Sum_probs=129.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
.+-.|+.++.|..++ .+++...... .+...+.++...++| .++.|+.+ +..+|. .+ +.. ......
T Consensus 32 ~l~v~t~~~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g-~l~v~t~~--l~~~d~-~g----~~~-----~~~~~~ 96 (330)
T 3hxj_A 32 TIYLGSSNKNLYAIN-TDGSVKWFFK-SGEIIECRPSIGKDG-TIYFGSDK--VYAINP-DG----TEK-----WRFDTK 96 (330)
T ss_dssp CEECSSTTTTTEEEC-TTSCEEESSC-GGGEEEECCEETTTT-EECCSSCE--EEEECC-CG----GGG-----GGSCC-
T ss_pred eEEEEcCCCEEEEEC-CCCcEEEEEe-cCCCcccceEEecCC-cEEEecCc--EEEECC-CC----cEE-----EEEECC
Confidence 444556677777787 6555432222 123345666776665 45556554 777764 22 111 111111
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
........+. +..+..++.++.+..+|.. ++....... . ...+.++...+++. +..++ .++.|..+|.+
T Consensus 97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~-~~~~~~~~~~~~g~-l~vgt-----~~~~l~~~d~~ 165 (330)
T 3hxj_A 97 KAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT-K-KAIYATPIVSEDGT-IYVGS-----NDNYLYAINPD 165 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC-S-SCCCSCCEECTTSC-EEEEC-----TTSEEEEECTT
T ss_pred CCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC-C-CceeeeeEEcCCCE-EEEEc-----CCCEEEEECCC
Confidence 1112222233 4567778889999999998 777666655 4 45566777776665 55565 67899999998
Q ss_pred CcEEEEeec-CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCC
Q psy10778 455 AQLITSLAS-ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTE 533 (556)
Q Consensus 455 g~~i~~~~~-~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D 533 (556)
|+.+..... ...+.++... +++ . +..++ +.|..+| .+++.+.... .....+.++..+++|.+ ..++.+
T Consensus 166 g~~~~~~~~~~~~~~~~~~d--~~g---~-l~v~t--~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g~l-~v~t~~ 234 (330)
T 3hxj_A 166 GTEKWRFKTNDAITSAASIG--KDG---T-IYFGS--DKVYAIN-PDGTEKWNFY-AGYWTVTRPAISEDGTI-YVTSLD 234 (330)
T ss_dssp SCEEEEEECSSCCCSCCEEC--TTC---C-EEEES--SSEEEEC-TTSCEEEEEC-CSSCCCSCCEECTTSCE-EEEETT
T ss_pred CCEeEEEecCCCceeeeEEc--CCC---E-EEEEe--CEEEEEC-CCCcEEEEEc-cCCcceeceEECCCCeE-EEEcCC
Confidence 777766643 3455666665 666 4 45555 7889999 7888777776 34466788888888754 456667
Q ss_pred CcEEEEEc
Q psy10778 534 GLVIIWES 541 (556)
Q Consensus 534 g~V~vwdl 541 (556)
+.|..++.
T Consensus 235 ~gl~~~~~ 242 (330)
T 3hxj_A 235 GHLYAINP 242 (330)
T ss_dssp TEEEEECT
T ss_pred CeEEEECC
Confidence 77877764
No 253
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=0.0015 Score=67.19 Aligned_cols=238 Identities=9% Similarity=-0.003 Sum_probs=149.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+|.+. ....|+..++........+ .....+..++|++.+..|+.+ ...+.|+.+++....... .....+..
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-----~~~~~~~~ 156 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----SYDTVISR 156 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C-----CCEEEECS
T ss_pred eeEEe-ccceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-----cceEEEeC
Confidence 44443 3478888888876555444 345678899999866666555 456778888776421000 11223333
Q ss_pred CCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 374 HSACVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 374 h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
.......+++.+ .+.+.++-...+.|.+.++........+.. . ......|+++|.++.|+.+... ..+.|...+
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~-~~~P~~iavdp~~g~ly~td~~---~~~~I~~~~ 231 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N-GSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGG 231 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-S-SCCEEEEEEETTTTEEEEEECS---SSCCEEEEE
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-C-CCCcceEEEecccCeEEEEeCC---CCCEEEEEe
Confidence 455678899987 455666666788999999885544333433 2 4568999999987877766410 246888889
Q ss_pred eCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEE
Q psy10778 453 INAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 453 i~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~s 529 (556)
++|.....+. .-.....|+++ +++. ++.++-...+.|..+|+........+.. .......++++. .+.++++
T Consensus 232 ~dG~~~~~~~~~~l~~P~glavd--~~~~--~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywt 306 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQWPNGITLD--LLSG--RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWT 306 (400)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEE
T ss_pred CCCCccEEEEECCCCceEEEEEE--eCCC--EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEe
Confidence 8876544442 23578899999 6551 4555555678999999854332222221 123456678874 3456666
Q ss_pred EcCCCcEEEEEcCCCCCcCee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~ 550 (556)
....+.|..++..+++.+..+
T Consensus 307 d~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 307 DIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp ESSSCSEEEEESSSCCCCEEE
T ss_pred cCCCCeEEEEEcCCCCceEEE
Confidence 667789999997776655444
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=3e-05 Score=74.33 Aligned_cols=159 Identities=9% Similarity=0.046 Sum_probs=115.2
Q ss_pred cEEEEEEccCCCEEEEEcCCC--cEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDG--TCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg--~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
-...+.|+ ++.+..+.+.+| .|+++|+.+++.++++.. ........+.++++.|..+.. .++.+.+||.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw----~~~~v~v~D~~ 115 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW----KNGLGFVWNIR 115 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES----SSSEEEEEETT
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe----eCCEEEEEECc
Confidence 35788898 677777877776 899999999999999876 344444434445667766653 68999999997
Q ss_pred -CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-CC---CCeEEEEEecCCCEEEE
Q psy10778 455 -AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-VA---LPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 455 -g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-h~---~~V~~l~~s~dg~~l~s 529 (556)
.+.+.++.....-..++ +++ ..|+.+..++.|.++|..+.+.+.++..+ .. ..+..+.|. +|+..+.
T Consensus 116 t~~~~~ti~~~~eG~glt----~dg---~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan 187 (262)
T 3nol_A 116 NLRQVRSFNYDGEGWGLT----HND---QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFAN 187 (262)
T ss_dssp TCCEEEEEECSSCCCCEE----ECS---SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred cCcEEEEEECCCCceEEe----cCC---CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEE
Confidence 88888887654333444 345 45655566789999999999999888741 11 334567887 7766666
Q ss_pred EcCCCcEEEEEcCCCCCcCeee
Q psy10778 530 SNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.-.++.|.+.|..+++.+..+.
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEE
T ss_pred EccCCeEEEEECCCCcEEEEEE
Confidence 6578899999999987765553
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.22 E-value=8.6e-05 Score=71.17 Aligned_cols=158 Identities=6% Similarity=-0.089 Sum_probs=114.8
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-C
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-A 455 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g 455 (556)
....+.++ ++.+.++.+.+|.|+++|+.+++.++++ . . .......+.++++.|..+.. .++.+.+||.+ .
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~--~~~FgeGit~~g~~Ly~ltw----~~~~v~V~D~~Tl 126 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-L--GNIFAEGLASDGERLYQLTW----TEGLLFTWSGMPP 126 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-C--TTCCEEEEEECSSCEEEEES----SSCEEEEEETTTT
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-C--CCcceeEEEEeCCEEEEEEc----cCCEEEEEECCcC
Confidence 35788887 4678888899999999999999988887 5 2 33444333445556665543 78999999997 8
Q ss_pred cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCC---CCeEEEEEecCCCEEEEEc
Q psy10778 456 QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVA---LPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 456 ~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~---~~V~~l~~s~dg~~l~sgs 531 (556)
+.+.++.....-..+++. + ..|+++..++.|.++|..+.+.+.++.. .+. ..++.+.|. +|+..+..-
T Consensus 127 ~~~~ti~~~~eGwGLt~D----g---~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw 198 (268)
T 3nok_A 127 QRERTTRYSGEGWGLCYW----N---GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW 198 (268)
T ss_dssp EEEEEEECSSCCCCEEEE----T---TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEeCCCceeEEecC----C---CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC
Confidence 888888765444455543 5 4666666789999999999999988874 111 245677887 776665555
Q ss_pred CCCcEEEEEcCCCCCcCeee
Q psy10778 532 TEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~~~~~~ 551 (556)
.+..|.+.|..+++.+..+.
T Consensus 199 ~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEE
T ss_pred CCCeEEEEeCCCCcEEEEEE
Confidence 78899999999988766554
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.22 E-value=0.00017 Score=78.05 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=92.3
Q ss_pred cCCC---EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-------------CCe--------------------------
Q psy10778 385 AGFS---VAVSSSEDGTCLLWDINTIGYIREIPCVDPN-------------TPV-------------------------- 422 (556)
Q Consensus 385 ~~~~---~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~-------------~~V-------------------------- 422 (556)
.+|+ .++.++.+|.+.+.|..+|+.+..... . . .++
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~-~-~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w 388 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV-D-PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQ 388 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES-S-TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCS
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc-c-CCccccccccccCCceecccccCCCCCCCceEECCCCccccCC
Confidence 4674 677899999999999999998876543 1 1 111
Q ss_pred eEEEEeCCCCeEEEEeecC-----------------------------c---CCCCeEEEEEeC-CcEEEEeecCCCeEE
Q psy10778 423 SHVTMSETNGEIASVLQTT-----------------------------K---TGGSILRLHTIN-AQLITSLASELRITS 469 (556)
Q Consensus 423 ~~l~~sp~~~~i~s~s~~~-----------------------------~---~~d~~I~iwdi~-g~~i~~~~~~~~i~~ 469 (556)
..++++|+++.+++.+... . ..++.|..||+. |+.+........+.+
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~ 468 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG 468 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc
Confidence 2467888888877765310 0 135789999986 888877765544433
Q ss_pred EEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 470 VTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 470 i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
.... ..+ ..+++++.||.|+.+|..+++.+.++..+....-.-+.+..+|+.+++
T Consensus 469 ~~~~--t~g---g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 469 GTLY--TKG---GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp BCEE--ETT---TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeEE--ECC---CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 3333 233 467779999999999999999999987532221222345677765554
No 257
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.20 E-value=0.00083 Score=66.86 Aligned_cols=230 Identities=7% Similarity=-0.094 Sum_probs=142.7
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEE-EEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLW-LGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~-tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 380 (556)
...|+..++................+.+++|.+.+..|+ +-...+.|..++..... .....+........+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~--------~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--------SVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSS--------CCCEEEEECCSCCCE
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCC--------ceEEEEcCCCCCccE
Confidence 567888888765322222112234567899998655554 44566778777765431 011222223345667
Q ss_pred EEEccC-CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEE
Q psy10778 381 LYLCAG-FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLIT 459 (556)
Q Consensus 381 l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~ 459 (556)
+++.+. +.+.++-...+.|.+.++........+.. . ......++++|.++.|..+... ..+.|...+.+|....
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~-~-~~~P~giavdp~~g~ly~td~~---~~~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ-E-LDQPRAIALDPSSGFMYWTDWG---EVPKIERAGMDGSSRF 158 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-S-CSSEEEEEEEGGGTEEEEEECS---SSCEEEEEETTSCSCE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC-C-CCCccEEEEeCCCCEEEEEecC---CCCEEEEEEcCCCCeE
Confidence 888874 45556666778999999874332222323 2 4678999999987777766410 2578888888875444
Q ss_pred Eee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEE
Q psy10778 460 SLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVI 537 (556)
Q Consensus 460 ~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~ 537 (556)
.+. .-...+.++++ +++. ++.++-+..+.|..+|+.. ...+.+..+......++++.. +.++.+-...+.|.
T Consensus 159 ~~~~~~l~~Pnglavd--~~~~--~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~ 232 (318)
T 3sov_A 159 IIINSEIYWPNGLTLD--YEEQ--KLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSIL 232 (318)
T ss_dssp EEECSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred EEEECCCCCccEEEEe--ccCC--EEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEE
Confidence 432 23467899999 6541 5666666778999999853 323333222345677888863 45566666778999
Q ss_pred EEEcCCCCCcCee
Q psy10778 538 IWESSSHNRTPKF 550 (556)
Q Consensus 538 vwdl~~~~~~~~~ 550 (556)
.++..+++....+
T Consensus 233 ~~~~~~G~~~~~i 245 (318)
T 3sov_A 233 ACNKYTGEGLREI 245 (318)
T ss_dssp EEETTTCCSCEEE
T ss_pred EEECCCCCceEEE
Confidence 9998776654433
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.18 E-value=0.0011 Score=74.67 Aligned_cols=230 Identities=10% Similarity=0.033 Sum_probs=139.7
Q ss_pred eccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCcc
Q psy10778 298 WNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSAC 377 (556)
Q Consensus 298 ~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~ 377 (556)
.|+.++-|..++.++++........+...|.++...++|. |..|+.++-+.+|+...+... ...........-....
T Consensus 188 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 264 (795)
T 4a2l_A 188 IGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIK--NYLHSPSNPKSISSNY 264 (795)
T ss_dssp EEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEE--EECCCTTCTTSCSCSB
T ss_pred EEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEE--EeecCCCCccccCCCe
Confidence 3555555778887765543322112356788888877765 555555545778876542100 0000000000012356
Q ss_pred EEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCC------CCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 378 VTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPC------VDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 378 V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~------~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
|.++...++|.+.+. +.+| |.+||..+++....... .. ...|.++..+++|.. ..|+ .++-|..|
T Consensus 265 i~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~D~~g~l-Wigt-----~~~Gl~~~ 335 (795)
T 4a2l_A 265 IRSLAMDSQNRLWIG-TFND-LNIYHEGTDSFASYSSNPVENGSLS-QRSVRSIFMDSQGGM-WLGT-----YFGGLNYY 335 (795)
T ss_dssp EEEEEECTTSCEEEE-ESSC-EEEEETTTTEEEEECCCTTSTTSCS-SSCEEEEEECTTSCE-EEEE-----SSSCEEEE
T ss_pred EEEEEEcCCCCEEEE-eCCh-hheEcCCCCeEEEEecCCCCCCCCC-CCcEEEEEEeCCcCE-EEEE-----CCCCeEEe
Confidence 999999988875554 4444 88999887654433211 01 356999999888664 4455 56778888
Q ss_pred EeCCcEEEEee--------cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-------CCCCCeE
Q psy10778 452 TINAQLITSLA--------SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-------NVALPVI 516 (556)
Q Consensus 452 di~g~~i~~~~--------~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-------~h~~~V~ 516 (556)
+........+. ....|.+++.. ++| .|..|+.++.|..|+..+++....... -....|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d--~~g----~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 409 (795)
T 4a2l_A 336 HPIRNRFKNIRNIPYKNSLSDNVVSCIVED--KDK----NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK 409 (795)
T ss_dssp CGGGGSSEEECCCTTSSSCSCSSEEEEEEC--TTS----CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred CCCcccceEEcCCCCCCCCCCCeeEEEEEC--CCC----CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence 87633232322 13468888877 776 466788887899999876654332210 1236799
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEEcCCCC
Q psy10778 517 AVTYSCDSQHLYASNTEGLVIIWESSSHN 545 (556)
Q Consensus 517 ~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~ 545 (556)
+++..++|+.|..|+.++-|..|+..+++
T Consensus 410 ~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 410 AVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 99999999856667777779999987643
No 259
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.18 E-value=2.1e-05 Score=80.07 Aligned_cols=213 Identities=9% Similarity=-0.011 Sum_probs=128.2
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCC------CCceEEEEEcCCCCEEEEEeC--CCcEEE--EEeeeccCcccccccCCCe
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPL------GATIATATTAPDCHTLWLGLT--SGNILV--YEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h------~~~V~~i~~s~dg~~l~tgs~--Dg~I~v--wd~~~~~~~~~~~~~~~~~ 369 (556)
..++.|.+||..+++....+..+. ......++++|||++++++.. +..+.+ +|..+-. ......+..
T Consensus 93 ~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~---~i~v~~~~~ 169 (368)
T 1mda_H 93 KRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ---LTKSASCFH 169 (368)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE---EEECSSCCC
T ss_pred CCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhce---EEECCCceE
Confidence 357899999999998888775430 123457899999999999874 457888 8875410 000000000
Q ss_pred EeeC---------CCccEEEEE--------------------------EccCCCEEEEEcCCCcEEEEeCCCC--eEEEE
Q psy10778 370 ILLG---------HSACVTDLY--------------------------LCAGFSVAVSSSEDGTCLLWDINTI--GYIRE 412 (556)
Q Consensus 370 ~l~~---------h~~~V~~l~--------------------------~s~~~~~l~sgs~Dg~I~iwdl~~~--~~v~~ 412 (556)
.... -.+.+..+. ..+++..++..+. +.+.+.|+... +.+..
T Consensus 170 ~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~ 248 (368)
T 1mda_H 170 IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAA 248 (368)
T ss_dssp CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECC
T ss_pred EccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEE
Confidence 0000 000000000 1334444444444 77888887643 22332
Q ss_pred eCCC------CC--CCCeeEEEEeCCCCeEEEEee-c-C--cCCCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCC
Q psy10778 413 IPCV------DP--NTPVSHVTMSETNGEIASVLQ-T-T--KTGGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGV 479 (556)
Q Consensus 413 l~~~------h~--~~~V~~l~~sp~~~~i~s~s~-~-~--~~~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~ 479 (556)
+... +. ......++++++++.++++.. . + -..++.+.++|+. ++.+..+........++++ ++|.
T Consensus 249 ~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s--~Dg~ 326 (368)
T 1mda_H 249 IDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAA--QDGA 326 (368)
T ss_dssp CCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEEC--CSSS
T ss_pred EEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEEC--CCCC
Confidence 3210 00 011223789999998887651 0 0 0001356699997 7888888766689999999 8882
Q ss_pred cceEEEEEe-CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEec
Q psy10778 480 SQNVIVTGH-SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSC 522 (556)
Q Consensus 480 ~~~~l~tg~-~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~ 522 (556)
.++++.. .++.|.++|+.+++.+.++.. ......+++.+
T Consensus 327 --~l~va~~~~~~~VsVID~~t~kvv~~I~v--g~~P~~i~~~~ 366 (368)
T 1mda_H 327 --SDNYANSAGTEVLDIYDAASDQDQSSVEL--DKGPESLSVQN 366 (368)
T ss_dssp --CEEEEEETTTTEEEEEESSSCEEEEECCC--CSCCCEEECCC
T ss_pred --EEEEEccCCCCeEEEEECCCCcEEEEEEC--CCCCCEEEeec
Confidence 3666776 599999999999999999973 24455666654
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.18 E-value=0.00022 Score=67.67 Aligned_cols=160 Identities=8% Similarity=-0.015 Sum_probs=115.0
Q ss_pred ccEEEEEEccCCCEEEEEcCCC--cEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEe
Q psy10778 376 ACVTDLYLCAGFSVAVSSSEDG--TCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTI 453 (556)
Q Consensus 376 ~~V~~l~~s~~~~~l~sgs~Dg--~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi 453 (556)
.....+.|+. +.+..+.+.+| .|+.+|+.+++.++++.. ........+...++.|..... .++.+.+||.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw----~~~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW----RNHEGFVYDL 92 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES----SSSEEEEEET
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe----eCCEEEEEEC
Confidence 4467899986 56777777754 899999999999998876 344444444444666666653 7899999999
Q ss_pred C-CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-CC---CCeEEEEEecCCCEEE
Q psy10778 454 N-AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-VA---LPVIAVTYSCDSQHLY 528 (556)
Q Consensus 454 ~-g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-h~---~~V~~l~~s~dg~~l~ 528 (556)
+ .+++.++.....-..++. ++ ..|+++..++.|.++|..+.+.+.++..+ +. ..++.+.+. +|+..+
T Consensus 93 ~tl~~~~ti~~~~~Gwglt~----dg---~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 93 ATLTPRARFRYPGEGWALTS----DD---SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp TTTEEEEEEECSSCCCEEEE----CS---SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred CcCcEEEEEeCCCCceEEee----CC---CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 7 888888876544445553 45 45555667899999999999998888742 11 345677776 676665
Q ss_pred EEcCCCcEEEEEcCCCCCcCeee
Q psy10778 529 ASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 529 sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
..-.+..|.+.|..+++.+..+.
T Consensus 165 nvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 165 NVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp EETTTTEEEEECTTTCBEEEEEE
T ss_pred EECCCCeEEEEECCCCCEEEEEE
Confidence 55567899999999987665543
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.14 E-value=0.00047 Score=74.78 Aligned_cols=212 Identities=10% Similarity=0.038 Sum_probs=128.2
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCC------------------------------------ce-EEEEEcCCCCEEEEEe
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGA------------------------------------TI-ATATTAPDCHTLWLGL 343 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~------------------------------------~V-~~i~~s~dg~~l~tgs 343 (556)
.+|.|+.+|.++++.+-.+...... .+ ...++.++...++.++
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3899999999998876555432111 00 1345666777888776
Q ss_pred CCC----------------cEEEEEeeeccCcccccccCCCeEee--CC--------CccEEEEEEc-cCC---CEEEEE
Q psy10778 344 TSG----------------NILVYEYELNASTNKIEFCKPPTILL--GH--------SACVTDLYLC-AGF---SVAVSS 393 (556)
Q Consensus 344 ~Dg----------------~I~vwd~~~~~~~~~~~~~~~~~~l~--~h--------~~~V~~l~~s-~~~---~~l~sg 393 (556)
.++ .|..+|..++ +.+-..+ .| ..++. +... .+| ..++.+
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG---------~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~ 329 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTG---------EAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHP 329 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTC---------CEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCC---------ceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEE
Confidence 553 6777777665 1112222 12 12232 2222 467 467889
Q ss_pred cCCCcEEEEeCCCCeEEEEeCCCCC------------CCCe--------------------------eEEEEeCCCCeEE
Q psy10778 394 SEDGTCLLWDINTIGYIREIPCVDP------------NTPV--------------------------SHVTMSETNGEIA 435 (556)
Q Consensus 394 s~Dg~I~iwdl~~~~~v~~l~~~h~------------~~~V--------------------------~~l~~sp~~~~i~ 435 (556)
+.+|.+.+.|..+|+.+..... .+ ..++ ..++++|+.+.++
T Consensus 330 ~~~G~l~~lD~~tG~~lw~~~~-~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y 408 (599)
T 1w6s_A 330 DRNGIVYTLDRTDGALVSANKL-DDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF 408 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEES-STTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred CCCcEEEEEECCCCCEeecccc-cCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence 9999999999999998876542 10 0111 2467788777666
Q ss_pred EEeecC----------------------------cC------CCCeEEEEEeC-CcEEEEeecCCCeEEEEEeeCCCCCc
Q psy10778 436 SVLQTT----------------------------KT------GGSILRLHTIN-AQLITSLASELRITSVTFSNAPEGVS 480 (556)
Q Consensus 436 s~s~~~----------------------------~~------~d~~I~iwdi~-g~~i~~~~~~~~i~~i~~s~~pdg~~ 480 (556)
+..... .+ ..+.|.-||+. |+.+-.........+-... ..+
T Consensus 409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~--tag-- 484 (599)
T 1w6s_A 409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMA--TAG-- 484 (599)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEE--ETT--
T ss_pred EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceE--ecC--
Confidence 542110 00 24688889986 8887776544322211112 123
Q ss_pred ceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEE
Q psy10778 481 QNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLY 528 (556)
Q Consensus 481 ~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~ 528 (556)
.+++.|+.||.++.+|..+++.+.++..+......-+.+..+|+..+
T Consensus 485 -g~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 485 -DLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp -TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred -CEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEE
Confidence 47777999999999999999999988753222223355667886433
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.06 E-value=0.0014 Score=62.73 Aligned_cols=196 Identities=9% Similarity=0.066 Sum_probs=128.2
Q ss_pred CCceEEEEEcCCCCEEEE-EeCCCcEEEEEeeeccCcccccccCCCeEee-CCCccEEEEEEccCCCEEEEEcCCCcEEE
Q psy10778 324 GATIATATTAPDCHTLWL-GLTSGNILVYEYELNASTNKIEFCKPPTILL-GHSACVTDLYLCAGFSVAVSSSEDGTCLL 401 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~t-gs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~I~i 401 (556)
.+.+..++++|++..|++ ...++.|...|.. + +.++.+. +-....-.|++.+++.++++.-.++.+.+
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g---------~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G---------DLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C---------CEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C---------CEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 356999999998776655 5667777776765 3 2223332 22256778889888887777667788999
Q ss_pred EeCCCCeE---EEEeC-----CCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC----cEEEEee-------
Q psy10778 402 WDINTIGY---IREIP-----CVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA----QLITSLA------- 462 (556)
Q Consensus 402 wdl~~~~~---v~~l~-----~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g----~~i~~~~------- 462 (556)
+++..... +.... .+. ......++++|.++.+.++. +.....+|.++| ..+....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~-N~g~EGLA~d~~~~~L~va~-----E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~ 169 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPT-NCGFEGLAYSRQDHTFWFFK-----EKNPIEVYKVNGLLSSNELHISKDKALQRQ 169 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCC-SSCCEEEEEETTTTEEEEEE-----ESSSEEEEEEESTTCSSCCEEEECHHHHHT
T ss_pred EEcCCCCeeeeeeeeccccccccc-cCCcceEEEeCCCCEEEEEE-----CcCCceEEEEcccccCCceeeecchhhccc
Confidence 88765432 22221 112 45678999999998888887 444445555543 1112121
Q ss_pred -cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCC--------CCCeEEEEEecCCCEEEEEcCC
Q psy10778 463 -SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNV--------ALPVIAVTYSCDSQHLYASNTE 533 (556)
Q Consensus 463 -~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h--------~~~V~~l~~s~dg~~l~sgs~D 533 (556)
.-..+.++++.+ ..+ ++++....+..|..+|. +++.+..+.... -...-.|+|.++|+ |+..++.
T Consensus 170 ~~~~d~S~l~~dp-~tg---~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~ 243 (255)
T 3qqz_A 170 FTLDDVSGAEFNQ-QKN---TLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP 243 (255)
T ss_dssp CCSSCCCEEEEET-TTT---EEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT
T ss_pred cccCCceeEEEcC-CCC---eEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC
Confidence 123568899995 344 78888889999999996 566666665321 13568999999998 4555777
Q ss_pred CcEEEEEc
Q psy10778 534 GLVIIWES 541 (556)
Q Consensus 534 g~V~vwdl 541 (556)
..++++.-
T Consensus 244 n~~y~f~~ 251 (255)
T 3qqz_A 244 NRFYRFTP 251 (255)
T ss_dssp TEEEEEEC
T ss_pred ceEEEEEe
Confidence 76666643
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.06 E-value=0.00017 Score=78.19 Aligned_cols=241 Identities=10% Similarity=0.017 Sum_probs=139.0
Q ss_pred EEeccCCCeEEEEeCCCCCCcceEcCCCC---CceEE-EEEcCCCCEEEEEe------CCCcEEEEEeeeccCccccccc
Q psy10778 296 ICWNECDNLIRLKMSKELPATPVIRPPLG---ATIAT-ATTAPDCHTLWLGL------TSGNILVYEYELNASTNKIEFC 365 (556)
Q Consensus 296 l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~---~~V~~-i~~s~dg~~l~tgs------~Dg~I~vwd~~~~~~~~~~~~~ 365 (556)
+..++.|+.|..+|.++++.+-....... ..+++ -.. .++ .+++++ .+|.|+-+|..++...-+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 66778899999999999987655543210 01211 111 133 555554 3788888887765211000000
Q ss_pred CCCe----------------------------EeeCCCccE-EEEEEccCCCEEEEEcCC----------------CcEE
Q psy10778 366 KPPT----------------------------ILLGHSACV-TDLYLCAGFSVAVSSSED----------------GTCL 400 (556)
Q Consensus 366 ~~~~----------------------------~l~~h~~~V-~~l~~s~~~~~l~sgs~D----------------g~I~ 400 (556)
.... .+..-...+ ..+++.++..+++.++.+ ++|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 0000 000000011 134566677777777665 3799
Q ss_pred EEeCCCCeEEEEeCCC-CCCC-------CeeEEEEe-CCC---CeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecCC--
Q psy10778 401 LWDINTIGYIREIPCV-DPNT-------PVSHVTMS-ETN---GEIASVLQTTKTGGSILRLHTIN-AQLITSLASEL-- 465 (556)
Q Consensus 401 iwdl~~~~~v~~l~~~-h~~~-------~V~~l~~s-p~~---~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~~-- 465 (556)
.+|..+|+.+..+... | .. ....+... .+| ..++.++ .+|.++++|.+ |+++.......
T Consensus 282 Ald~~TG~~~W~~q~~~~-d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~-----~~G~l~~lD~~tG~~lw~~~~~~~~ 355 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPH-DEWDYAGVNVMMLSEQKDKDGKARKLLTHPD-----RNGIVYTLDRTDGALVSANKLDDTV 355 (599)
T ss_dssp EEETTTCCEEEEEESSTT-CSSCCCCCCCCEEEEEECTTSCEEEEEEEEC-----TTSEEEEEETTTCCEEEEEESSTTC
T ss_pred EEeCCCCceeeEeecCCC-ccccccCCCccEEEeccccCCcEEEEEEEEC-----CCcEEEEEECCCCCEeecccccCCc
Confidence 9999999988766541 2 11 11112222 456 3455566 89999999986 88876654211
Q ss_pred ------------Ce--------------------------EEEEEeeCCCCCcceEEEEE--------------------
Q psy10778 466 ------------RI--------------------------TSVTFSNAPEGVSQNVIVTG-------------------- 487 (556)
Q Consensus 466 ------------~i--------------------------~~i~~s~~pdg~~~~~l~tg-------------------- 487 (556)
.+ ..++++ |+. .++++.
T Consensus 356 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d--p~~---~~~yv~~~~~~~~~~~~~~~~~~g~~ 430 (599)
T 1w6s_A 356 NVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYD--PKR---ELFFMGINHICMDWEPFMLPYKAGQF 430 (599)
T ss_dssp CSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE--TTT---TEEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCC--CCC---CEEEEeccccceeeecccccccCCcc
Confidence 00 134455 333 222221
Q ss_pred -------------e------CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcC
Q psy10778 488 -------------H------SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTP 548 (556)
Q Consensus 488 -------------~------~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~ 548 (556)
+ ..|.|..||+.+++.+.+...+ .+..+-.+...+.+++.++.||.++.||.++++.+-
T Consensus 431 ~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 431 FVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLW 508 (599)
T ss_dssp CCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred eecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEE
Confidence 1 3578999999999998887632 222222233456778889999999999999998876
Q ss_pred eee
Q psy10778 549 KFL 551 (556)
Q Consensus 549 ~~~ 551 (556)
+++
T Consensus 509 ~~~ 511 (599)
T 1w6s_A 509 KFK 511 (599)
T ss_dssp EEE
T ss_pred Eee
Confidence 664
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.05 E-value=0.00043 Score=74.98 Aligned_cols=60 Identities=13% Similarity=0.197 Sum_probs=45.0
Q ss_pred CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 490 DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 490 dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
+|.|..||+.+++.+.+.... .++..-.....+.+++.++.||.++.||.++++.+-+++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 588999999999998877632 223222233346788889999999999999998876664
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.05 E-value=0.003 Score=65.57 Aligned_cols=221 Identities=8% Similarity=-0.048 Sum_probs=131.9
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC-CCc---EEEEEeeeccCcccccccCCCeEeeCCCccE
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLT-SGN---ILVYEYELNASTNKIEFCKPPTILLGHSACV 378 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~-Dg~---I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V 378 (556)
+.|+.++.+++....... .......++++++|+.|+++.. ++. ..+|-...+. . .....+.. ....
T Consensus 159 ~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~----~---~~~~~l~~-~~~p 228 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG----F---KVITELTK-GQNC 228 (430)
T ss_dssp EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT----S---CSEEEEEE-CSSC
T ss_pred CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc----e---eeeeeecc-CCCc
Confidence 677777777654443332 4456789999999996666654 221 2222222220 0 10122221 2345
Q ss_pred EEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc-
Q psy10778 379 TDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ- 456 (556)
Q Consensus 379 ~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~- 456 (556)
.+++++| ++.++++-..++.|..++...+........ ........++++|++++|..+.. ..+.|..++.++.
T Consensus 229 ~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~-~~~~~P~gia~~pdG~~lyv~d~----~~~~I~~~~~d~~~ 303 (430)
T 3tc9_A 229 NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI-QDSGWEFHIQFHPSGNYAYIVVV----NQHYILRSDYDWKT 303 (430)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC-SSSSCCEEEEECTTSSEEEEEET----TTTEEEEEEEETTT
T ss_pred eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc-CCCCcceeEEEcCCCCEEEEEEC----CCCEEEEEeCCccc
Confidence 6788999 777777777889999999987654222222 10345789999999996665542 6789999988742
Q ss_pred -E---EEEeecC----------------CCeE-EEEEee------CCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC
Q psy10778 457 -L---ITSLASE----------------LRIT-SVTFSN------APEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 457 -~---i~~~~~~----------------~~i~-~i~~s~------~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
. +..+... .... .++..+ +++| +++++-..++.|+.++ .+++.......
T Consensus 304 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g---~lyvaD~~n~~I~~i~-~~G~v~~~~g~ 379 (430)
T 3tc9_A 304 KRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY---DFYFCDRENHCIRILT-PQGRVTTFAGR 379 (430)
T ss_dssp TEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE---EEEEEEGGGTEEEEEC-TTSEEEEEEEC
T ss_pred ccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC---eEEEEECCCcEEEEEC-CCCcEEEEEeC
Confidence 1 1111110 1122 455431 1345 6667767778999998 45654433321
Q ss_pred C---C-------------CCCeEEEEEecC-CCEEEEEcCCCcEEEEEcC
Q psy10778 510 N---V-------------ALPVIAVTYSCD-SQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 510 ~---h-------------~~~V~~l~~s~d-g~~l~sgs~Dg~V~vwdl~ 542 (556)
+ . -.....++++++ +.++++-..+++|+.++++
T Consensus 380 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 380 GSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0 0 125789999994 6666666667889888764
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.05 E-value=0.0017 Score=63.87 Aligned_cols=215 Identities=9% Similarity=0.032 Sum_probs=124.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCc--EEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGN--ILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~--I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
++++...++.|..++..+. ....+. .......+++.++|+++++...... |..++...+ +. +.+..+
T Consensus 45 lyv~d~~~~~I~~~d~~g~-~~~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g----~~---~~~~~~- 113 (306)
T 2p4o_A 45 IFVTNHEVGEIVSITPDGN-QQIHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG----TV---ETLLTL- 113 (306)
T ss_dssp EEEEETTTTEEEEECTTCC-EEEEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS----CE---EEEEEC-
T ss_pred EEEEeCCCCeEEEECCCCc-eEEEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCC----eE---EEEEeC-
Confidence 3444445677877876643 222332 2346889999999996665543333 444443332 11 000111
Q ss_pred CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeE-EEEe-------CCCCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGY-IREI-------PCVDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~-v~~l-------~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
........++..+++..+++-..++.|.++|...++. +... .....-.....+ +++++.+..+.. .
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~----~ 187 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT----E 187 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET----T
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC----C
Confidence 1122234555555555566666789999999876532 2111 110001234555 888887766653 6
Q ss_pred CCeEEEEEeCC--cE--EEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEE--EecCCCCCCeEEE
Q psy10778 445 GSILRLHTINA--QL--ITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLL--TLNTNVALPVIAV 518 (556)
Q Consensus 445 d~~I~iwdi~g--~~--i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~--~~~~~h~~~V~~l 518 (556)
.+.|..+++++ .. ...+........++++ ++| +++++....+.|.++|.. ++... .+. ......+++
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd--~dG---~l~va~~~~~~V~~~~~~-G~~~~~~~~~-~~~~~p~~~ 260 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFD--VEG---NLYGATHIYNSVVRIAPD-RSTTIIAQAE-QGVIGSTAV 260 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEB--TTC---CEEEECBTTCCEEEECTT-CCEEEEECGG-GTCTTEEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEeccCCCCCeEEC--CCC---CEEEEeCCCCeEEEECCC-CCEEEEeecc-cccCCceEE
Confidence 78999999863 21 1111112355678888 888 787777778899999974 66533 343 223568999
Q ss_pred EEe---cCCCEEEEEcCC
Q psy10778 519 TYS---CDSQHLYASNTE 533 (556)
Q Consensus 519 ~~s---~dg~~l~sgs~D 533 (556)
+|. ++++.|+.++..
T Consensus 261 a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 261 AFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECCSTTTTTEEEEEECT
T ss_pred EEecccCCCCEEEEECCC
Confidence 999 888777776654
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.00 E-value=0.00049 Score=74.51 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=89.6
Q ss_pred cCCC---EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC-------------CC---------------------------
Q psy10778 385 AGFS---VAVSSSEDGTCLLWDINTIGYIREIPCVDPN-------------TP--------------------------- 421 (556)
Q Consensus 385 ~~~~---~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~-------------~~--------------------------- 421 (556)
.+|+ .++.++.+|.+.++|..+|+.+..... . . .+
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~-~-~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF-V-DNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES-S-SCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEeccccc-c-cCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 4664 788899999999999999998866543 2 1 00
Q ss_pred -----eeEEEEeCCCCeEEEEeecC----------------------------cCCCCeEEEEEeC-CcEEEEeecCCCe
Q psy10778 422 -----VSHVTMSETNGEIASVLQTT----------------------------KTGGSILRLHTIN-AQLITSLASELRI 467 (556)
Q Consensus 422 -----V~~l~~sp~~~~i~s~s~~~----------------------------~~~d~~I~iwdi~-g~~i~~~~~~~~i 467 (556)
-..++++|+.+.+++..... ....+.|.-||++ |+.+-.......+
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~ 488 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPL 488 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCC
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCC
Confidence 01356677766666543210 0135789999986 8888776554333
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
..-... ..+ .+++.|+.||.++.||..+++.+.++..+....-.-+.+..+|+..++
T Consensus 489 ~~g~~~--tag---glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 489 WAGVLA--TAG---NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CSCCEE--ETT---TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cccceE--eCC---CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 222222 123 478889999999999999999999987532111223566778865443
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.97 E-value=0.003 Score=65.70 Aligned_cols=219 Identities=9% Similarity=-0.052 Sum_probs=130.7
Q ss_pred CeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCC---cEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 303 NLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSG---NILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg---~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
+.|+.++..++...... ........++++++|+ |+.+...+ .-.++.+...... .....+. ......
T Consensus 162 ~~I~~id~~~g~v~~~~--~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~------~~~~~~~-~~~~P~ 231 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKT--TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF------TERLSLC-NARGAK 231 (433)
T ss_dssp SCEEEEETTTTEEEEEC--CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT------CCEEEEE-ECSSBC
T ss_pred CCEEEEECCCCEEEEee--cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe------ecccccc-ccCCCC
Confidence 66667776655443332 2445688999999999 44444321 1122222211000 0001222 233456
Q ss_pred EEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEe-CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC---
Q psy10778 380 DLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREI-PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--- 454 (556)
Q Consensus 380 ~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l-~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--- 454 (556)
.+++++ ++.+.++-..++.|..+|..++.....+ .. ........++++|+++.|..+.. ..+.|+.++.+
T Consensus 232 giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~dpdG~~LYvad~----~~~~I~~~~~d~~~ 306 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWHPTGDWAYIIYN----GKHCIYRVDYNRET 306 (433)
T ss_dssp CCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEECTTSSEEEEEET----TTTEEEEEEBCTTT
T ss_pred EEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEeCCCCEEEEEeC----CCCEEEEEeCCCCC
Confidence 788999 6777667667889999999877653332 22 10233457999999996666542 67889998876
Q ss_pred CcE--EEEeec----------------CCCeEEEEE---------eeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEe
Q psy10778 455 AQL--ITSLAS----------------ELRITSVTF---------SNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTL 507 (556)
Q Consensus 455 g~~--i~~~~~----------------~~~i~~i~~---------s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~ 507 (556)
+.. ...+.. -.....+++ . .+| +++++-..++.|+.++. ++......
T Consensus 307 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd--~~g---~lyvaD~~n~~I~~~~~-~G~v~t~~ 380 (433)
T 4hw6_A 307 GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE--DEY---DFYFCDRDSHTVRVLTP-EGRVTTYA 380 (433)
T ss_dssp CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS--CCE---EEEEEETTTTEEEEECT-TSEEEEEE
T ss_pred cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC--CCC---cEEEEECCCCEEEEECC-CCCEEEEE
Confidence 211 111111 123567888 5 667 77777778889999985 66443332
Q ss_pred cCCC----------------CCCeEEEEEe-cCCCEEEEEcCCCcEEEEEcC
Q psy10778 508 NTNV----------------ALPVIAVTYS-CDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 508 ~~~h----------------~~~V~~l~~s-~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
..+. -.....|+++ ++|.++++-..+++|+.++++
T Consensus 381 G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 381 GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1110 1247899999 677777777777899988875
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.96 E-value=0.00074 Score=66.96 Aligned_cols=198 Identities=10% Similarity=-0.038 Sum_probs=119.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee--------------------CCCccEEEEEEcc
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL--------------------GHSACVTDLYLCA 385 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~--------------------~h~~~V~~l~~s~ 385 (556)
...++++.++|++++++..++.|..|+...+. ...+. .......++++.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG----------FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTC----------EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCc----------eEEEecccccccccccccccchhccccCCCCceEEEcC
Confidence 34578888998878888888999888765321 11111 0113578899997
Q ss_pred -CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCC---CCCCCeeEEEEeC-CCCeEEEEeecC------------cCCCCeE
Q psy10778 386 -GFSVAVSSSEDGTCLLWDINTIGYIREIPCV---DPNTPVSHVTMSE-TNGEIASVLQTT------------KTGGSIL 448 (556)
Q Consensus 386 -~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~---h~~~~V~~l~~sp-~~~~i~s~s~~~------------~~~d~~I 448 (556)
++.++++ ...+.+..+|..+++ +..+... ........+++.+ +|...++-.... ....+.|
T Consensus 90 ~~g~l~v~-d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 90 QNNQLYIV-DCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTTEEEEE-ETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCCcEEEE-ECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 6655544 444558888877553 2222110 0013478899999 887666543100 0023678
Q ss_pred EEEEeCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEE-eCCCeEEEEeCCCCe--EEEEecCCCCCCeEEEEEecCC
Q psy10778 449 RLHTINAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTG-HSDGTIQLWSGYKLA--HLLTLNTNVALPVIAVTYSCDS 524 (556)
Q Consensus 449 ~iwdi~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg-~~dg~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~s~dg 524 (556)
..+|..+..+..+ ..-.....++++ ++| +.|+++ +.++.|..+++.... ....+.. ..+ ...++++++|
T Consensus 168 ~~~d~~~~~~~~~~~~~~~p~gia~~--~dg---~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 168 IKYDPSTKETTLLLKELHVPGGAEVS--ADS---SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADG 240 (322)
T ss_dssp EEEETTTTEEEEEEEEESCCCEEEEC--TTS---SEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTS
T ss_pred EEEeCCCCEEEEeccCCccCcceEEC--CCC---CEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCC
Confidence 8888863333322 223456779999 888 655544 567899999986421 1122211 123 7889999999
Q ss_pred CEEEEEcC----------CCcEEEEEcC
Q psy10778 525 QHLYASNT----------EGLVIIWESS 542 (556)
Q Consensus 525 ~~l~sgs~----------Dg~V~vwdl~ 542 (556)
++.++... .+.|..+|..
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CEEEEecCcccccccCCCccEEEEECCC
Confidence 87766544 3567777653
No 270
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.95 E-value=0.01 Score=66.42 Aligned_cols=232 Identities=9% Similarity=-0.017 Sum_probs=142.3
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEE-EEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLW-LGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~-tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 380 (556)
...|+..++.......++ .....+..+++.+.+..|+ +-...+.|+.+++......+ .....+.........
T Consensus 403 ~~~Ir~i~l~~~~~~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-----~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----SYDTVISRDIQAPDG 475 (791)
T ss_dssp BSSEEEECTTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------CEEEECSSCSCCCE
T ss_pred ccceeEeeccCCcceeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-----ceeEEEecCCCCcce
Confidence 456777777765554444 3456678999998655555 44556778888776421000 112233334456678
Q ss_pred EEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEE
Q psy10778 381 LYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLIT 459 (556)
Q Consensus 381 l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~ 459 (556)
|++.+.++ +.++-...+.|.+.++........+.. . ......|+++|.++.|+.+... ..+.|...+++|....
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~-~-l~~P~gIaVDp~~g~LYwtD~g---~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N-GSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNGVDIY 550 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-T-TCCEEEEEEETTTTEEEEEECS---SSCEEEEEETTSCCEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC-C-CCCcceEEEecCCCCEEEecCC---CCCeEEEEecCCCceE
Confidence 99987764 555666788999999985433333333 2 4568999999987777766420 2368999999876655
Q ss_pred Eeec--CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCCcE
Q psy10778 460 SLAS--ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEGLV 536 (556)
Q Consensus 460 ~~~~--~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V 536 (556)
.+.. -.....|+++ +.+. +++++-...+.|...++........+.. +.-....+|++.. ++++++-...+.|
T Consensus 551 ~lv~~~l~~P~GLavD--~~~~--~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I 625 (791)
T 3m0c_C 551 SLVTENIQWPNGITLD--LLSG--RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI 625 (791)
T ss_dssp EEECSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred EEEeCCCCCceEEEEe--cCCC--eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEE
Confidence 5532 3578899999 5441 5555555678899999854333333321 1223456777743 3455555566888
Q ss_pred EEEEcCCCCCcCee
Q psy10778 537 IIWESSSHNRTPKF 550 (556)
Q Consensus 537 ~vwdl~~~~~~~~~ 550 (556)
...+..+++.+..+
T Consensus 626 ~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 626 FSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcceEEe
Confidence 88887776555444
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.91 E-value=0.0065 Score=61.12 Aligned_cols=192 Identities=8% Similarity=-0.064 Sum_probs=120.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEE-EEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTL-WLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+..+....+.|+.++..+......+. ........+++.+.+..| ++-...+.|.+.+.+.. .....+..
T Consensus 87 ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~---------~~~~l~~~ 156 (349)
T 3v64_C 87 VFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------HRKVLLWQ 156 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECT
T ss_pred EEEEeccCCceEEEecCCCCceEEEe-CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC---------ceEEEEeC
Confidence 33334456778778777654443333 223445688888755554 45455678888876643 11122233
Q ss_pred CCccEEEEEEccCCCE-EEEEcCC-CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCAGFSV-AVSSSED-GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~-l~sgs~D-g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.......++++|.+.. .++-... +.|...++.. .....+.... -.....++++++++.|..+.. ..+.|..+
T Consensus 157 ~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~----~~~~I~~~ 230 (349)
T 3v64_C 157 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTH-LFWPNGLTIDYAGRRMYWVDA----KHHVIERA 230 (349)
T ss_dssp TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSS-CSCEEEEEEETTTTEEEEEET----TTTEEEEE
T ss_pred CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECC-CCCcceEEEeCCCCEEEEEEC----CCCEEEEE
Confidence 4456789999986554 4454444 7888888763 3333432202 356789999998888877753 56789999
Q ss_pred EeCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 452 TINAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 452 di~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
|++|.....+. .......+++. ++ .++++-...+.|..++..+++....+.
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav~---~~---~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITVF---ED---SLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEE---TT---EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCceEEEEeCCCCCceEEEEE---CC---EEEEecCCCCeEEEEEccCCCccEEec
Confidence 99865433332 23466778875 34 677777788899999876776655554
No 272
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.90 E-value=0.02 Score=64.23 Aligned_cols=219 Identities=8% Similarity=-0.020 Sum_probs=138.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcC-------CCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRP-------PLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~-------~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
-+=.|+.++-|..++..+++....... -....|.+++..++|+.|..|+.++-|.+|+..++.
T Consensus 369 ~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~---------- 438 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ---------- 438 (795)
T ss_dssp CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC----------
T ss_pred CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc----------
Confidence 344566676788888776654332211 123579999998888867778877778888866431
Q ss_pred CeEee-----CCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeC-----CCCCCCCeeEEEEeCCCCeEEEE
Q psy10778 368 PTILL-----GHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIP-----CVDPNTPVSHVTMSETNGEIASV 437 (556)
Q Consensus 368 ~~~l~-----~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~-----~~h~~~~V~~l~~sp~~~~i~s~ 437 (556)
...+. .....|.++...+++.+.+... + -+.+||..+++...... ... ...|.++...+++...+ +
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~i~~d~~g~lWi-g 514 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVV-SKQITTLFRDSHKRLWI-G 514 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCC-CCCEEEEEECTTCCEEE-E
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccC-CceEEEEEECCCCCEEE-E
Confidence 11111 2345799999988888655544 4 48889988765433211 101 35788998888776554 4
Q ss_pred eecCcCCCCeEEEEEeCCcEEEEee--------cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC
Q psy10778 438 LQTTKTGGSILRLHTINAQLITSLA--------SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 438 s~~~~~~d~~I~iwdi~g~~i~~~~--------~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
+ . +-|..||.++... .+. ....|.++... ++| + |..|+.+ .|..||..+++.. .+..
T Consensus 515 t-----~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d--~~g---~-lWigT~~-Gl~~~d~~~~~~~-~~~~ 579 (795)
T 4a2l_A 515 G-----E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEA--SNG---I-IWVGTRE-GFYCFNEKDKQIK-RYNT 579 (795)
T ss_dssp E-----S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEEC--TTS---C-EEEEESS-CEEEEETTTTEEE-EECG
T ss_pred e-----C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEEC--CCC---C-EEEEeCC-CceeECCCCCcEE-EeCC
Confidence 4 4 4688888874444 332 13468888877 777 4 4445544 5788887666543 3321
Q ss_pred --C-CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 510 --N-VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 510 --~-h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
+ ....|.++..+++|.+.+++ . +-|..|+..+.
T Consensus 580 ~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~ 615 (795)
T 4a2l_A 580 TNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNPETE 615 (795)
T ss_dssp GGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTT
T ss_pred CCCCchhheEEEEECCCCCEEEEc-C-CceEEEcCCCC
Confidence 2 13568999999999876655 3 45777887653
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.89 E-value=0.012 Score=58.13 Aligned_cols=191 Identities=10% Similarity=-0.058 Sum_probs=118.9
Q ss_pred eEEeccCCCeEEEEeCCC----CCCcceEcCCCCCceEEEEEcCCCCEE-EEEeCCCcEEEEEeeeccCcccccccCCCe
Q psy10778 295 MICWNECDNLIRLKMSKE----LPATPVIRPPLGATIATATTAPDCHTL-WLGLTSGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~----~~~~~~~~~~h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
+..+....+.|..++..+ ......+. ........+++.+.+..| ++-...+.|.+.+.+.. ....
T Consensus 44 ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~---------~~~~ 113 (316)
T 1ijq_A 44 IYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------KRKT 113 (316)
T ss_dssp EEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS---------SEEE
T ss_pred EEEEECCCCcEEEEECCCCCCCcccEEEEe-CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC---------ceEE
Confidence 344445567888888765 22222222 222445788888655555 45466788888886532 1111
Q ss_pred EeeCCCccEEEEEEccCCCEEEEEcC-C-CcEEEEeCCCCeEEEEe-CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCC
Q psy10778 370 ILLGHSACVTDLYLCAGFSVAVSSSE-D-GTCLLWDINTIGYIREI-PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGS 446 (556)
Q Consensus 370 ~l~~h~~~V~~l~~s~~~~~l~sgs~-D-g~I~iwdl~~~~~v~~l-~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~ 446 (556)
.+.........+++.|.+..|..+.. . +.|...++. |...+.+ .. . -.....++++++++.|..+.. ..+
T Consensus 114 ~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~-~-~~~P~gla~d~~~~~lY~~D~----~~~ 186 (316)
T 1ijq_A 114 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE-N-IQWPNGITLDLLSGRLYWVDS----KLH 186 (316)
T ss_dssp EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS-S-CSCEEEEEEETTTTEEEEEET----TTT
T ss_pred EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC-C-CCCceEEEEeccCCEEEEEEC----CCC
Confidence 22233456789999986665544443 3 678888876 4444433 22 2 456889999998888877753 567
Q ss_pred eEEEEEeCCcEEEEee----cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 447 ILRLHTINAQLITSLA----SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 447 ~I~iwdi~g~~i~~~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
.|..+|.+|.....+. .-.....+++. . + .++++....+.|..++..+++.+..+.
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~-~---~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF--E-D---KVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEE--T-T---EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEE--C-C---EEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 9999999864433332 12456788886 3 4 677788788999999987777666654
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.87 E-value=0.0031 Score=60.41 Aligned_cols=192 Identities=10% Similarity=0.029 Sum_probs=122.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
+.+....++.|...|.. ++....+...-....-.+++.+++.++++.-.++.+.++++.....................
T Consensus 41 L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~ 119 (255)
T 3qqz_A 41 LFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPT 119 (255)
T ss_dssp EEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCC
T ss_pred EEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccc
Confidence 55555567788888887 66666665443456778888888876666556678888887654210000000000000123
Q ss_pred CccEEEEEEccCCCEEEEEcCCCcEEEEeCC---CCeEEEEeC------CCCCCCCeeEEEEeCCCCeEEEEeecCcCCC
Q psy10778 375 SACVTDLYLCAGFSVAVSSSEDGTCLLWDIN---TIGYIREIP------CVDPNTPVSHVTMSETNGEIASVLQTTKTGG 445 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~---~~~~v~~l~------~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d 445 (556)
....-.|+|+|.++.|.++.+.....+|.+. ....+..+. ..+ ...+..++++|..+.+.+.+. .+
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~-~~d~S~l~~dp~tg~lliLS~----~s 194 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT-LDDVSGAEFNQQKNTLLVLSH----ES 194 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC-SSCCCEEEEETTTTEEEEEET----TT
T ss_pred cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc-cCCceeEEEcCCCCeEEEEEC----CC
Confidence 4557899999999877777766555555543 111122110 102 346789999999888887775 77
Q ss_pred CeEEEEEeCCcEEEEeecC----------CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeC
Q psy10778 446 SILRLHTINAQLITSLASE----------LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSG 498 (556)
Q Consensus 446 ~~I~iwdi~g~~i~~~~~~----------~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~ 498 (556)
+.|..+|.+|+.+..+... .....|++. ++| ++.++ ++...++.+..
T Consensus 195 ~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d--~~G---~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 195 RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMD--ASG---NIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEEC--TTC---CEEEE-ETTTEEEEEEC
T ss_pred CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEEC--CCC---CEEEE-cCCceEEEEEe
Confidence 8999999999988777533 267899999 888 65555 66666666643
No 275
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.86 E-value=0.012 Score=64.18 Aligned_cols=234 Identities=7% Similarity=-0.092 Sum_probs=147.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
+|.++ ..+.|+..++++......+.......+..++|++.+..|+.+ ..++.|..+++... .....+..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~---------~~~~v~~~ 77 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGS---------ALEHVVEF 77 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECS
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCC---------CcEEEEeC
Confidence 44443 567888888886554333333344568899999876666554 45678877776542 11122222
Q ss_pred CCccEEEEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 374 HSACVTDLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 374 h~~~V~~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
.......+++.+.+. +.++-...+.|.+.++........+.. . -.....|+++|..+.|..+... ..+.|...+
T Consensus 78 g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~-~-l~~P~~iavdp~~G~lY~tD~g---~~~~I~r~~ 152 (628)
T 4a0p_A 78 GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK-D-LDSPRALALDPAEGFMYWTEWG---GKPKIDRAA 152 (628)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS-S-CCCEEEEEEETTTTEEEEEECS---SSCEEEEEE
T ss_pred CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC-C-CCCcccEEEccCCCeEEEeCCC---CCCEEEEEe
Confidence 224567888887655 555656678899999874332222323 2 4668999999977777766410 256788888
Q ss_pred eCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 453 INAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 453 i~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
++|.....+ ..-.....++++ +++. ++.++-...+.|...|+..... ..+. .......++++.. +.++++-.
T Consensus 153 ~dG~~~~~l~~~~~~P~GlalD--~~~~--~LY~aD~~~~~I~~~d~dG~~~-~v~~-~~l~~P~glav~~-~~ly~tD~ 225 (628)
T 4a0p_A 153 MDGSERTTLVPNVGRANGLTID--YAKR--RLYWTDLDTNLIESSNMLGLNR-EVIA-DDLPHPFGLTQYQ-DYIYWTDW 225 (628)
T ss_dssp TTSCSCEEEECSCSSEEEEEEE--TTTT--EEEEEETTTTEEEEEETTSCSC-EEEE-ECCSCEEEEEEET-TEEEEEET
T ss_pred CCCCceEEEECCCCCcceEEEc--cccC--EEEEEECCCCEEEEEcCCCCce-EEee-ccCCCceEEEEEC-CEEEEecC
Confidence 886544333 344678899999 6541 5556666778999999854333 2333 2234567888875 45555555
Q ss_pred CCCcEEEEEcCCCCCcCee
Q psy10778 532 TEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~~~~~ 550 (556)
..+.|...|..+++....+
T Consensus 226 ~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 226 SRRSIERANKTSGQNRTII 244 (628)
T ss_dssp TTTEEEEEETTTCCSCEEE
T ss_pred CCCEEEEEECCCCCceEEE
Confidence 6789999998776654444
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.86 E-value=0.0028 Score=62.34 Aligned_cols=193 Identities=9% Similarity=-0.055 Sum_probs=116.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC--CcEEEE
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED--GTCLLW 402 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D--g~I~iw 402 (556)
.....++|+++|+++++-..++.|..|+.... . ...........++++.++++++++.... ..|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~----------~-~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN----------Q-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC----------E-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc----------e-EEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 34678999999987777667888888875432 0 1111223468899999999976665433 247777
Q ss_pred eCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc--EEEEee----------cCCCeEEE
Q psy10778 403 DINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ--LITSLA----------SELRITSV 470 (556)
Q Consensus 403 dl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~--~i~~~~----------~~~~i~~i 470 (556)
|..+++.......+. ......++..+++..+++-. ..+.|+.+|..+. .+.... .-.....+
T Consensus 101 d~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi 174 (306)
T 2p4o_A 101 VKSDGTVETLLTLPD-AIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 174 (306)
T ss_dssp ECTTSCEEEEEECTT-CSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred cCCCCeEEEEEeCCC-ccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc
Confidence 877776543332201 23345566555444344333 4788888887632 121110 01234555
Q ss_pred EEeeCCCCCcceEEEEEeCCCeEEEEeCCC-CeE--EEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcC
Q psy10778 471 TFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-LAH--LLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESS 542 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-~~~--~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~ 542 (556)
+ +++. .++++-...+.|..+++.. ++. ...+.. ......++++++|++.++....+.|.+++..
T Consensus 175 --s--~dg~--~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 175 --K--RFGN--FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp --E--EETT--EEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred --C--cCCC--EEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 5 5551 4556666778999999864 321 122211 1345678999999887777778899999875
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.85 E-value=0.0042 Score=63.50 Aligned_cols=203 Identities=7% Similarity=-0.086 Sum_probs=123.7
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEE-EEEeCCCcEEEEEeeeccCcccccccCCCeEeeC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTL-WLGLTSGNILVYEYELNASTNKIEFCKPPTILLG 373 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~ 373 (556)
++.+....+.|+.++..+......+. ........+++.+.+..| ++-...+.|.+.+++.. .....+..
T Consensus 130 ly~~D~~~~~I~r~~~~g~~~~~~~~-~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~---------~~~~l~~~ 199 (386)
T 3v65_B 130 VFWSDVTLDRILRANLNGSNVEEVVS-TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA---------HRKVLLWQ 199 (386)
T ss_dssp EEEEETTTTEEEEEETTSCCEEEEEC-SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC---------SCEEEECS
T ss_pred EEEEeCCCCcEEEEecCCCCcEEEEe-CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC---------ceEEeecC
Confidence 33344556777778777554333332 223345678888755555 44455667777665532 11122333
Q ss_pred CCccEEEEEEccCCCEEEEE-cCC-CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCAGFSVAVSS-SED-GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sg-s~D-g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.......+++.|.+..|..+ ... +.|...++........+.. . -.....|+++++++.|..+.. ..+.|..+
T Consensus 200 ~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-~-~~~PnGlavd~~~~~lY~aD~----~~~~I~~~ 273 (386)
T 3v65_B 200 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT-H-LFWPNGLTIDYAGRRMYWVDA----KHHVIERA 273 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-S-CSCEEEEEEEGGGTEEEEEET----TTTEEEEE
T ss_pred CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC-C-CCCeeeEEEeCCCCEEEEEEC----CCCEEEEE
Confidence 34567899999866655444 344 6788888874332223332 2 456789999998888877753 66889999
Q ss_pred EeCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEE
Q psy10778 452 TINAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTY 520 (556)
Q Consensus 452 di~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 520 (556)
|++|.....+. .......+++. . + .++++....+.|..++..+++.+..+.. ......++++
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~--~-~---~ly~td~~~~~V~~~~~~~G~~~~~i~~-~~~~p~gi~v 337 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVF--E-D---SLYWTDWHTKSINSANKFTGKNQEIIRN-KLHFPMDIHT 337 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEE--T-T---EEEEEETTTTEEEEEETTTCCSCEEEEC-SCSCCCCEEE
T ss_pred eCCCCeeEEEEECCCCCceEEEEE--C-C---EEEEeeCCCCeEEEEECCCCcceEEEcc-CCCCCceEEE
Confidence 99864333332 23466788875 3 4 6777888889999999777776666652 2233444444
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.83 E-value=0.023 Score=58.25 Aligned_cols=200 Identities=9% Similarity=-0.048 Sum_probs=122.0
Q ss_pred ccCCCeEEEEeCCCCC---CcceEcCCCCCceEEEEEcCCCCEE-EEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 299 NECDNLIRLKMSKELP---ATPVIRPPLGATIATATTAPDCHTL-WLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 299 gs~Dg~I~lw~~~~~~---~~~~~~~~h~~~V~~i~~s~dg~~l-~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
....+.|+.++..... ....+..........+++.+.+..| ++-...+.|.+.+++.. .....+...
T Consensus 130 D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~---------~~~~l~~~~ 200 (400)
T 3p5b_L 130 DLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---------KRKTLFREN 200 (400)
T ss_dssp ETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC---------SEEEEEECS
T ss_pred ecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC---------ceEEEEeCC
Confidence 3445677777765421 1122222234567788998744444 45456677877776532 111223334
Q ss_pred CccEEEEEEccCCCEEEEEc-C-CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEE
Q psy10778 375 SACVTDLYLCAGFSVAVSSS-E-DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs-~-Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwd 452 (556)
......|++.|.+..|..+. . .+.|...++........+.. . -.....|+++++++.|..+.. ..+.|..+|
T Consensus 201 ~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~-~-l~~P~glavd~~~~~lY~aD~----~~~~I~~~d 274 (400)
T 3p5b_L 201 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-N-IQWPNGITLDLLSGRLYWVDS----KLHSISSID 274 (400)
T ss_dssp SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS-S-CSCEEEEEEETTTTEEEEEET----TTTEEEEEE
T ss_pred CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC-C-CCceEEEEEEeCCCEEEEEEC----CCCEEEEEe
Confidence 45578999999666555444 2 47888888874333233333 2 367899999998888887753 578899999
Q ss_pred eCCcEEEEeec----CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEE
Q psy10778 453 INAQLITSLAS----ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTY 520 (556)
Q Consensus 453 i~g~~i~~~~~----~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~ 520 (556)
++|.....+.. -....++++. . + .++++....+.|..+|..+++.+..+. .......+++.
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~--~-~---~lywtd~~~~~V~~~~~~~G~~~~~i~-~~~~~p~~i~v 339 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVF--E-D---KVFWTDIINEAIFSANRLTGSDVNLLA-ENLLSPEDMVL 339 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEE--T-T---EEEEEESSSCSEEEEESSSCCCCEEEE-CSCSCEEEEEE
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEe--C-C---EEEEecCCCCeEEEEEcCCCCceEEEe-cCCCCCceEEE
Confidence 98654443321 2456677775 3 3 577788888899999987887766665 22334555544
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.81 E-value=0.0041 Score=62.03 Aligned_cols=193 Identities=12% Similarity=0.124 Sum_probs=122.9
Q ss_pred CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCC----C---EEEEEcC---CCcEEEEeC
Q psy10778 335 DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGF----S---VAVSSSE---DGTCLLWDI 404 (556)
Q Consensus 335 dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~----~---~l~sgs~---Dg~I~iwdl 404 (556)
....++.....+-+.+||+. + +.++.+.. +.++.+..-|+. + ++++... +++|.++++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G---------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-G---------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-S---------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred CccEEEEEcCCCCEEEEcCC-C---------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 34456666677889999994 3 33444443 556666666532 2 3333333 578999977
Q ss_pred --CCCeEEEEeCC---C--CCCCCeeEEEE--eCCCC--eEEEEeecCcCCCCeEEEEEeC--------CcEEEEeecCC
Q psy10778 405 --NTIGYIREIPC---V--DPNTPVSHVTM--SETNG--EIASVLQTTKTGGSILRLHTIN--------AQLITSLASEL 465 (556)
Q Consensus 405 --~~~~~v~~l~~---~--h~~~~V~~l~~--sp~~~--~i~s~s~~~~~~d~~I~iwdi~--------g~~i~~~~~~~ 465 (556)
.++ .+..+.. + .....+..+++ ++.++ ++++.. .++.+..|++. +++++++...+
T Consensus 107 Dp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-----k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs 180 (355)
T 3amr_A 107 DGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-----KEGEFEQYELKADKNGYISGKKVRAFKMNS 180 (355)
T ss_dssp CTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-----SSSEEEEEEEEECTTSCEEEEEEEEEECSS
T ss_pred CCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-----CCCeEEEEEEEeCCCCcccceEEEEecCCC
Confidence 333 3555521 0 10155667777 77544 344444 77999998872 35678888888
Q ss_pred CeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-----CCeEEEEecCCC-CCCeEEEEE--ecCCC-EEEEEc-CCCc
Q psy10778 466 RITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-----KLAHLLTLNTNV-ALPVIAVTY--SCDSQ-HLYASN-TEGL 535 (556)
Q Consensus 466 ~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-----~~~~~~~~~~~h-~~~V~~l~~--s~dg~-~l~sgs-~Dg~ 535 (556)
.+..|... ++. ..|..+-++..|..++.. +++.+..+..++ ...+..|++ .++++ +|++++ .+.+
T Consensus 181 q~EgcvvD--d~~---g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 181 QTEGMAAD--DEY---GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp CEEEEEEE--TTT---TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred CcceEEEc--CCC---CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 99999998 666 689999998777777754 356676664322 346888888 45555 555555 5679
Q ss_pred EEEEEcC-CCCCcCee
Q psy10778 536 VIIWESS-SHNRTPKF 550 (556)
Q Consensus 536 V~vwdl~-~~~~~~~~ 550 (556)
..+||.. +.+.+..|
T Consensus 256 ~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 256 YAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEESSTTCCEEEEE
T ss_pred EEEEECCCCCcEEEEE
Confidence 9999996 44444443
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.80 E-value=0.0078 Score=59.71 Aligned_cols=191 Identities=8% Similarity=-0.060 Sum_probs=120.5
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCE-EEEEeCCCcEEEEEeeeccCcccccccCCCeEe-e
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHT-LWLGLTSGNILVYEYELNASTNKIEFCKPPTIL-L 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~-l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-~ 372 (556)
+..+....+.|..++..+......+..........+++.+.+.. .++-...+.|.+++.+.. ....+ .
T Consensus 49 lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~----------~~~~l~~ 118 (318)
T 3sov_A 49 IYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS----------LRKVLFW 118 (318)
T ss_dssp EEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC----------SCEEEEC
T ss_pred EEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC----------cEEEEEe
Confidence 33334556778778776553222221122334567888875444 455456678888887642 11222 2
Q ss_pred CCCccEEEEEEccCCCEEEEEc--CCCcEEEEeCCCCeEEEEe-CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSS--EDGTCLLWDINTIGYIREI-PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs--~Dg~I~iwdl~~~~~v~~l-~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
........+++.|.+..|..+. ..+.|...++. |.....+ .. . -.....|+++++++.|..+.. ..+.|.
T Consensus 119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~-~-l~~Pnglavd~~~~~lY~aD~----~~~~I~ 191 (318)
T 3sov_A 119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINS-E-IYWPNGLTLDYEEQKLYWADA----KLNFIH 191 (318)
T ss_dssp SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECS-S-CSCEEEEEEETTTTEEEEEET----TTTEEE
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEEC-C-CCCccEEEEeccCCEEEEEEC----CCCEEE
Confidence 4445678999998765555544 35788888876 3333333 22 2 356789999998888877753 678999
Q ss_pred EEEeCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 450 LHTINAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 450 iwdi~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
.+|++|.....+. .......+++. .+ .++.+-...+.|..++..+++....+.
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~--~~----~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLF--ED----ILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEE--TT----EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEcCCCCceEEEecCCCCCceEEEEe--CC----EEEEEecCCCeEEEEECCCCCceEEEe
Confidence 9999864333332 23566778876 43 577777788999999988887666655
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.0011 Score=68.90 Aligned_cols=159 Identities=7% Similarity=-0.028 Sum_probs=103.5
Q ss_pred cEEEEEEcc-CCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC
Q psy10778 377 CVTDLYLCA-GFSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA 455 (556)
Q Consensus 377 ~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g 455 (556)
....++++| +...|..+...+.|..+|+..+........ ......++++++++.|+++..........+..++.++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~---~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG---LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC---CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC---CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 456789997 345555555558899999987654444443 5678999999999967666521100122345555554
Q ss_pred cEE--EEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEE-EEEc
Q psy10778 456 QLI--TSLASELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHL-YASN 531 (556)
Q Consensus 456 ~~i--~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l-~sgs 531 (556)
... ..+........++++ | +| .++++-..++.|..++...+........+.......++|+|+|++| ++-.
T Consensus 215 ~~~~~~~l~~~~~p~giavd--p~~g---~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETH--PING---ELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp TSCSEEEEEECSSCCCEEEC--TTTC---CEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred ceeeeeeeccCCCceEEEEe--CCCC---EEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 322 233334456778888 7 67 6777777889999999876654233322223457899999999954 4555
Q ss_pred CCCcEEEEEcCC
Q psy10778 532 TEGLVIIWESSS 543 (556)
Q Consensus 532 ~Dg~V~vwdl~~ 543 (556)
..++|..++...
T Consensus 290 ~~~~I~~~~~d~ 301 (430)
T 3tc9_A 290 NQHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEEET
T ss_pred CCCEEEEEeCCc
Confidence 678899988754
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.72 E-value=0.00066 Score=74.66 Aligned_cols=227 Identities=8% Similarity=-0.052 Sum_probs=125.2
Q ss_pred eEEEEeCCCCCCcce--EcCCCCCceEEEEEcCCCCEEEEEeC-CCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE
Q psy10778 304 LIRLKMSKELPATPV--IRPPLGATIATATTAPDCHTLWLGLT-SGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 304 ~I~lw~~~~~~~~~~--~~~~h~~~V~~i~~s~dg~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 380 (556)
.+.+||..+++.... ....+.....++++..+++.+++|+. ++.+.+||..+.... .+..+...... .+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~-------~~~~~~~~R~~-~s 291 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI-------PGPDMQVARGY-QS 291 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEE-------ECCCCSSCCSS-CE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCcee-------ECCCCCccccc-cc
Confidence 588899988765443 22223333445677889999999984 457899987754211 11111111111 23
Q ss_pred EEEccCCCEEEEEc-CC-----CcEEEEeCCCCeEEEEeCC----CCCCCCeeEEEEeCCCCeEEEEeecCc----CCCC
Q psy10778 381 LYLCAGFSVAVSSS-ED-----GTCLLWDINTIGYIREIPC----VDPNTPVSHVTMSETNGEIASVLQTTK----TGGS 446 (556)
Q Consensus 381 l~~s~~~~~l~sgs-~D-----g~I~iwdl~~~~~v~~l~~----~h~~~~V~~l~~sp~~~~i~s~s~~~~----~~d~ 446 (556)
++..+++++++.|+ .+ ..+.+||..+.+.... .. +.....- ...+..++..++.++.++. ....
T Consensus 292 ~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 292 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp EEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred eEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccccccccccc-cceeecCCceEEEECCCCcEEEecCcc
Confidence 45567899999988 44 5799999988764432 11 0000000 0112234444455542110 0245
Q ss_pred eEEEEEeCC-cEEEEee---c-------CCCeEEEEEeeCCCCCcceEEEEEeCCC-----------eEEEEeCCCCeEE
Q psy10778 447 ILRLHTINA-QLITSLA---S-------ELRITSVTFSNAPEGVSQNVIVTGHSDG-----------TIQLWSGYKLAHL 504 (556)
Q Consensus 447 ~I~iwdi~g-~~i~~~~---~-------~~~i~~i~~s~~pdg~~~~~l~tg~~dg-----------~I~iwd~~~~~~~ 504 (556)
.+..||... ....... . ...-.++.+. ..++ ++++.|+.++ .|.+||..+.+..
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~-~~~~---~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~ 445 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD-AVKG---KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT 445 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE-TTTT---EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEecc-CCCC---eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee
Confidence 678888862 2222211 1 1122344443 1356 7888888543 6888888776654
Q ss_pred EEe-cCCCCCC-eEEEEEecCCCEEEEEcCC-----------CcEEEEEcCCC
Q psy10778 505 LTL-NTNVALP-VIAVTYSCDSQHLYASNTE-----------GLVIIWESSSH 544 (556)
Q Consensus 505 ~~~-~~~h~~~-V~~l~~s~dg~~l~sgs~D-----------g~V~vwdl~~~ 544 (556)
... ..-.... -.+++..+++++++.|+.+ ..+.+||..+.
T Consensus 446 ~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 446 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp EECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred EEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 433 1111222 2345667899999998865 46889998663
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.69 E-value=0.026 Score=59.22 Aligned_cols=230 Identities=8% Similarity=-0.019 Sum_probs=136.5
Q ss_pred CCCeEEEEeCCCCCCcceEcCC--CCCceEEEEE-------cCCCCEEEEEeCCC-----c--EEEEEeeeccCcccccc
Q psy10778 301 CDNLIRLKMSKELPATPVIRPP--LGATIATATT-------APDCHTLWLGLTSG-----N--ILVYEYELNASTNKIEF 364 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~--h~~~V~~i~~-------s~dg~~l~tgs~Dg-----~--I~vwd~~~~~~~~~~~~ 364 (556)
..+.|++.|.+++.+..+...+ .......++| +++|+.|+++...+ . |.+.+.... +....
T Consensus 160 ~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~---G~~~~ 236 (496)
T 3kya_A 160 GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD---GTFDD 236 (496)
T ss_dssp TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT---SCCST
T ss_pred CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC---Cceee
Confidence 3466888888876665554432 2335889999 99999777766544 2 444442221 11100
Q ss_pred cCCCeEeeCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEeCC-------CCeE--------------EEEeCCCCCCCCe
Q psy10778 365 CKPPTILLGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWDIN-------TIGY--------------IREIPCVDPNTPV 422 (556)
Q Consensus 365 ~~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwdl~-------~~~~--------------v~~l~~~h~~~~V 422 (556)
......+... ....+++++| ++.++++-..++.|..+|+. ++.. +..+.. ....
T Consensus 237 ~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~---~~~p 312 (496)
T 3kya_A 237 RSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD---PSWE 312 (496)
T ss_dssp TSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS---SSCC
T ss_pred cccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC---CCCc
Confidence 0000122211 2335678899 45667777788899999987 4443 222322 4557
Q ss_pred eEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCc--EE---EEeec----C------------CCeE-EEEEeeC-----
Q psy10778 423 SHVTMSETNGEIASVLQTTKTGGSILRLHTINAQ--LI---TSLAS----E------------LRIT-SVTFSNA----- 475 (556)
Q Consensus 423 ~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~--~i---~~~~~----~------------~~i~-~i~~s~~----- 475 (556)
..|+++|+++.+..+.. ..+.|+.++.++. .+ ..+.. . .... .++....
T Consensus 313 ~~ia~~p~G~~lYvaD~----~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVI----NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp EEEEECTTSSEEEEEET----TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred eEEEEcCCCCEEEEEeC----CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 89999999996555542 6789999887642 22 12211 0 1233 3343210
Q ss_pred CCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC-----------------------CCCCeEEEEEecC-CCEEEEEc
Q psy10778 476 PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-----------------------VALPVIAVTYSCD-SQHLYASN 531 (556)
Q Consensus 476 pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-----------------------h~~~V~~l~~s~d-g~~l~sgs 531 (556)
.+| +++++-..++.|+.++ .++. +.++... .-.....|+++++ |.++++-+
T Consensus 389 ~~g---~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~ 463 (496)
T 3kya_A 389 EEY---DFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQ 463 (496)
T ss_dssp CCE---EEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEET
T ss_pred CCC---eEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeC
Confidence 245 6777777889999998 4664 4444210 0134789999997 77777777
Q ss_pred CCCcEEEEEcCCCCC
Q psy10778 532 TEGLVIIWESSSHNR 546 (556)
Q Consensus 532 ~Dg~V~vwdl~~~~~ 546 (556)
.+.+|+.++++....
T Consensus 464 ~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 464 VGHTIRTISMEQEEN 478 (496)
T ss_dssp TTTEEEEEEECCCC-
T ss_pred CCCEEEEEECCCCcc
Confidence 788999999977443
No 284
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.69 E-value=0.0022 Score=71.72 Aligned_cols=196 Identities=7% Similarity=0.037 Sum_probs=112.9
Q ss_pred ceEEEEEc-CCCCEEEEEeC-CC----cEEEEEeeec-cCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC--
Q psy10778 326 TIATATTA-PDCHTLWLGLT-SG----NILVYEYELN-ASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED-- 396 (556)
Q Consensus 326 ~V~~i~~s-~dg~~l~tgs~-Dg----~I~vwd~~~~-~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-- 396 (556)
.+...+|| |||++||.+.. +| +|+++|+.++ ... ...+.. ....++|+||++.|+..+.|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--------~~~~~~---~~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--------ADKVSG---TNGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--------CCCEEE---ECSCCEECSSTTEEEEEEECTT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--------CccccC---ceeeEEEecCCCEEEEEEECCC
Confidence 67889999 99998886643 33 4888888764 210 011111 13468899999877766654
Q ss_pred ---CcEEEEeCCCCeE--EEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC---cE-EEEe-e-cCC
Q psy10778 397 ---GTCLLWDINTIGY--IREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA---QL-ITSL-A-SEL 465 (556)
Q Consensus 397 ---g~I~iwdl~~~~~--v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g---~~-i~~~-~-~~~ 465 (556)
..|.++++.+++. ...+.... ......+.|+|||++|+..+... ....|+++|+.+ +. +..+ . ...
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~-~~~~~~~~~SpDg~~l~~~~~~~--~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 320 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHN-PLFSAFMYKAADTNTLCIGSQSP--ETAEVHLLDLRKGNAHNTLEIVRPREKG 320 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCC-TTCEEEEEECTTSSEEEEEEECS--SCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred CCCCEEEEEECCCCchhcEEEEecCC-CceEEEEEECCCCCEEEEEecCC--CCceEEEEECCCCCCCceeEEeecCCCC
Confidence 2588888877532 22332202 34567889999999998776422 356788889873 22 1222 2 233
Q ss_pred CeEEEEEeeCCCCCcceEEEEEeCC----CeEEEEeCCCC-eEEE-EecCCCCCCeEEEEEecCCCEEEEEcCCCc--EE
Q psy10778 466 RITSVTFSNAPEGVSQNVIVTGHSD----GTIQLWSGYKL-AHLL-TLNTNVALPVIAVTYSCDSQHLYASNTEGL--VI 537 (556)
Q Consensus 466 ~i~~i~~s~~pdg~~~~~l~tg~~d----g~I~iwd~~~~-~~~~-~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~--V~ 537 (556)
...++.|+ ..+ .+++....+ ..|..+++.+. +... .+.......+..+.+. .+.++++...+|. |.
T Consensus 321 ~~~s~~~~--~g~---~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 321 VRYDVQMH--GTS---HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp CCEEEEEE--TTT---EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred ceEEEeee--eCC---EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 44555554 333 455555443 36777777642 2222 2321112244555554 2345566677775 45
Q ss_pred EEEc
Q psy10778 538 IWES 541 (556)
Q Consensus 538 vwdl 541 (556)
++++
T Consensus 395 ~~dl 398 (751)
T 2xe4_A 395 TMMA 398 (751)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5564
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.62 E-value=0.063 Score=59.95 Aligned_cols=230 Identities=9% Similarity=-0.056 Sum_probs=134.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc-------------CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR-------------PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNK 361 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~-------------~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~ 361 (556)
.+-.|+..+-|.+++..++....... .-....|.++...++|. |..|+.++-|..++.......
T Consensus 270 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-- 346 (781)
T 3v9f_A 270 KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFH-- 346 (781)
T ss_dssp EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCE--
T ss_pred CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcce--
Confidence 44445554567777776654332211 01345799999888875 667777777888876543100
Q ss_pred ccccCCC--eEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEe---CCCCCCCCeeEEEEeCCCCeEEE
Q psy10778 362 IEFCKPP--TILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREI---PCVDPNTPVSHVTMSETNGEIAS 436 (556)
Q Consensus 362 ~~~~~~~--~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l---~~~h~~~~V~~l~~sp~~~~i~s 436 (556)
....... ..-......|.++...+++.+ ..|+.++-+..+|..+++..... .. . ...|.++...+++...+
T Consensus 347 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~-~-~~~v~~i~~d~~g~lWi- 422 (781)
T 3v9f_A 347 TWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAIYNKENREL-L-SNSVLCSLKDSEGNLWF- 422 (781)
T ss_dssp EEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEECC-----C-C-CSBEEEEEECTTSCEEE-
T ss_pred eeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEEccCCCCC-C-CcceEEEEECCCCCEEE-
Confidence 0000000 000112356999998888764 45565566888998754332111 11 2 46788998887765444
Q ss_pred EeecCcCCCCeEEEEEeCCcEEEEee----cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC--
Q psy10778 437 VLQTTKTGGSILRLHTINAQLITSLA----SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN-- 510 (556)
Q Consensus 437 ~s~~~~~~d~~I~iwdi~g~~i~~~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~-- 510 (556)
++ .++-|..++.+......+. ....|.++... ++| + |..|+. +.|..+|..+++........
T Consensus 423 gt-----~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d--~~g---~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 423 GT-----YLGNISYYNTRLKKFQIIELEKNELLDVRVFYED--KNK---K-IWIGTH-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp EE-----TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC--TTS---E-EEEEET-TEEEEEESSSSSCCEEECTTTS
T ss_pred Ee-----ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC--CCC---C-EEEEEC-CceEEEeCCCCeEEecccCccc
Confidence 55 5667888888744444443 23578888877 777 4 555665 56888998766543322211
Q ss_pred --CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 511 --VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 511 --h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
....|.++...++|++.+ |+.++-|..|+..++
T Consensus 491 ~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 146799999999887665 444444777877553
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.62 E-value=0.027 Score=63.01 Aligned_cols=225 Identities=13% Similarity=0.040 Sum_probs=136.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEc--------CCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIR--------PPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCK 366 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~--------~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~ 366 (556)
-+=.|+.++-|..++..+........ ......|.+++..++|. |..|+.++-|.+|+..+... . .
T Consensus 325 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~----~--~ 397 (781)
T 3v9f_A 325 NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVA----I--Y 397 (781)
T ss_dssp CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEE----E--C
T ss_pred CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeE----E--E
Confidence 34445556777777776554332211 01235699999888765 56677667788888654310 0 0
Q ss_pred CCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCC--CCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 367 PPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPC--VDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 367 ~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~--~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
....-......|.++...+++.+.+ |+.++-+..+|..+++.. .+.. .. ...|.++...+++. |..++ .
T Consensus 398 ~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~-~~~v~~i~~d~~g~-lwigt-----~ 468 (781)
T 3v9f_A 398 NKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNE-LLDVRVFYEDKNKK-IWIGT-----H 468 (781)
T ss_dssp C-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTC-CCCEEEEEECTTSE-EEEEE-----T
T ss_pred ccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCC-CCeEEEEEECCCCC-EEEEE-----C
Confidence 0000122346799999888887555 666666889998876543 3321 02 46789998887765 55555 4
Q ss_pred CCeEEEEEeCCcEEEEee-c------CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC---CCCCC
Q psy10778 445 GSILRLHTINAQLITSLA-S------ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT---NVALP 514 (556)
Q Consensus 445 d~~I~iwdi~g~~i~~~~-~------~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~---~h~~~ 514 (556)
+-|..+|........+. . ...|.++... ++| + |..|+.++.|..+|..+++. ..+.. -....
T Consensus 469 -~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d--~~g---~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 469 -AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQD--SEG---R-FWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNT 540 (781)
T ss_dssp -TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEEC--TTC---C-EEEEESSSCEEEECTTCCEE-EEECTTTTCSCSC
T ss_pred -CceEEEeCCCCeEEecccCcccccccceeEEEEEc--CCC---C-EEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCe
Confidence 56888888632222221 1 3578888877 777 4 55566544577788766543 33331 12457
Q ss_pred eEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 515 VIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 515 V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
|.++...++|.+.++. .+|.|..||..++
T Consensus 541 i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 541 INQIYRSSKGQMWLAT-GEGLVCFPSARNF 569 (781)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEESCTTTC
T ss_pred eEEEEECCCCCEEEEE-CCCceEEECCCCC
Confidence 8999999998866654 4776588887664
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.62 E-value=0.00026 Score=78.48 Aligned_cols=228 Identities=9% Similarity=-0.048 Sum_probs=133.3
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
..+.|+..++.+.....++. ....+..++|.+.+..|+.+. ..+.|+.+++....... .....+........
T Consensus 384 ~~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~-----~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----SYDTVISRDIQAPD 456 (699)
T ss_dssp CTTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-C-----CCCCBCCSCC--CC
T ss_pred CccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCc-----ceEEEEeCCCCCcc
Confidence 34677888877654433332 234567889998766666654 55788888876410000 11111111222345
Q ss_pred EEEEccC-CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEE
Q psy10778 380 DLYLCAG-FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLI 458 (556)
Q Consensus 380 ~l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i 458 (556)
.|++.+. +.+.++-...+.|.+.++........+.. . ......|+++|.++.|+.+... ..+.|..++++|...
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~-~-~~~P~giavDp~~g~ly~td~~---~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-Q-GSKPRAIVVDPVHGFMYWTDWG---TPAKIKKGGLNGVDI 531 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC-S-SCCCCCEECCSSSSCCEECCCS---SSCCEEBCCSSSCCC
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC-C-CCCcceEEEccCCCcEEEcccC---CCCeEEEEeCCCCCe
Confidence 6788754 45555656678999999875433333332 2 3567889999987776665410 236788888876544
Q ss_pred EEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC--CCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 459 TSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT--NVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 459 ~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
..+. .-...+.|+++ +++. +++++-+..+.|..+++.... .+.+.. .......+|++..+ .++++....+
T Consensus 532 ~~l~~~~l~~PnGlavd--~~~~--~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 532 YSLVTENIQWPNGITLD--LLSG--RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CEESCSSCSSCCCEEEC--TTTC--CEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred eEEEeCCCCCccEEEEe--ccCC--EEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 3332 23456789999 6542 566666677899999985433 233321 11233456666654 4555555678
Q ss_pred cEEEEEcCCCCC
Q psy10778 535 LVIIWESSSHNR 546 (556)
Q Consensus 535 ~V~vwdl~~~~~ 546 (556)
.|..++..+++.
T Consensus 606 ~V~~~d~~~G~~ 617 (699)
T 1n7d_A 606 AIFSANRLTGSD 617 (699)
T ss_dssp CEEEEETTTEEE
T ss_pred eEEEEEccCCCc
Confidence 999999766543
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.60 E-value=0.014 Score=58.09 Aligned_cols=187 Identities=9% Similarity=0.081 Sum_probs=123.6
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCC----CCE--EEEE-e-C--CCcEEEEEeeeccCcccccccCCCe
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPLGATIATATTAPD----CHT--LWLG-L-T--SGNILVYEYELNASTNKIEFCKPPT 369 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~d----g~~--l~tg-s-~--Dg~I~vwd~~~~~~~~~~~~~~~~~ 369 (556)
...+-+.++|+ +++.+..+.. +.++.+..-|+ |+. ++.+ . . +++|++|+++... ..+.
T Consensus 47 ~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--------~~l~ 114 (355)
T 3amr_A 47 NKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--------GTLQ 114 (355)
T ss_dssp ETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--------CCEE
T ss_pred cCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--------Ccee
Confidence 34578999999 6777766642 45677666552 222 3333 3 3 5789999885321 1112
Q ss_pred Eee-------CCCccEEEEEE--ccC-CC-EEEEEcCCCcEEEEeC-------CCCeEEEEeCCCCCCCCeeEEEEeCCC
Q psy10778 370 ILL-------GHSACVTDLYL--CAG-FS-VAVSSSEDGTCLLWDI-------NTIGYIREIPCVDPNTPVSHVTMSETN 431 (556)
Q Consensus 370 ~l~-------~h~~~V~~l~~--s~~-~~-~l~sgs~Dg~I~iwdl-------~~~~~v~~l~~~h~~~~V~~l~~sp~~ 431 (556)
.+. .-...+..++. ++. +. +++...++|.+..|++ .+.+.++++.. .+.+..++..+..
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l---gsq~EgcvvDd~~ 191 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM---NSQTEGMAADDEY 191 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC---SSCEEEEEEETTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC---CCCcceEEEcCCC
Confidence 221 11145566666 664 43 6777888999999988 23477899987 6789999999999
Q ss_pred CeEEEEeecCcCCCCeEEEEEeC------CcEEEEeec---CCCeEEEEEeeCCCCCcceEEEEEe-CCCeEEEEeCC-C
Q psy10778 432 GEIASVLQTTKTGGSILRLHTIN------AQLITSLAS---ELRITSVTFSNAPEGVSQNVIVTGH-SDGTIQLWSGY-K 500 (556)
Q Consensus 432 ~~i~s~s~~~~~~d~~I~iwdi~------g~~i~~~~~---~~~i~~i~~s~~pdg~~~~~l~tg~-~dg~I~iwd~~-~ 500 (556)
+.|..+- ++.-|..++.+ ++++..... ...+..|++.+.+++. .+|++++ .++++.+||.. +
T Consensus 192 g~Lyv~e-----Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~--gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 192 GRLYIAE-----EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK--GYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp TEEEEEE-----TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC--EEEEEEEGGGTEEEEEESSTT
T ss_pred CeEEEec-----ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC--EEEEEEcCCCCEEEEEECCCC
Confidence 9999987 67666666654 345555432 3578889886445552 2566555 67799999996 6
Q ss_pred CeEEEEec
Q psy10778 501 LAHLLTLN 508 (556)
Q Consensus 501 ~~~~~~~~ 508 (556)
.+.+..+.
T Consensus 265 ~~~vg~f~ 272 (355)
T 3amr_A 265 NKYVADFR 272 (355)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 77777774
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.58 E-value=0.018 Score=62.61 Aligned_cols=227 Identities=7% Similarity=-0.080 Sum_probs=133.7
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
....|+..++................+..+++++.+..|+.+. ..+.|..++++... .....+........
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--------~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--------SVQNVVVSGLLSPD 87 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------CEEEECSSCSCEE
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--------ceEEEEeCCCCCcC
Confidence 3567788777654211222223445678999998767666654 45677777776430 01122333335688
Q ss_pred EEEEccCCC-EEEEEcCCCcEEEEeCCCCeEEEEeC-CCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcE
Q psy10778 380 DLYLCAGFS-VAVSSSEDGTCLLWDINTIGYIREIP-CVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQL 457 (556)
Q Consensus 380 ~l~~s~~~~-~l~sgs~Dg~I~iwdl~~~~~v~~l~-~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~ 457 (556)
.+++.+.+. +.++-...+.|.+.++... ..+.+. . . -.....|+++|.++.|..+... ..+.|...+++|..
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~-~-l~~P~~Iavdp~~g~ly~tD~g---~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQ-E-LDQPRAIALDPSSGFMYWTDWG---EVPKIERAGMDGSS 161 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECS-S-CSCCCCEEEETTTTEEEEEECS---SSCEEEEEETTSCS
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeC-C-CCCCceEEEecCCCeEEEeccC---CCCEEEEEECCCCc
Confidence 999998555 5556667889999998743 333332 3 2 4567899999987777766410 24677777888754
Q ss_pred EEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCc
Q psy10778 458 ITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGL 535 (556)
Q Consensus 458 i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~ 535 (556)
...+. .-.....++++ +++. ++.++-...+.|...|+.. .....+..+......+|++..+ .+.++-...+.
T Consensus 162 ~~~l~~~~~~~P~Glald--~~~~--~LY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~ 235 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLD--YEEQ--KLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHS 235 (619)
T ss_dssp CEEEECSSCSSEEEEEEE--TTTT--EEEEEETTTCCEEEESSSC-CEEC---------CCCEEESSS-EEEEECTTTCS
T ss_pred eEEEEeCCCCCCcEEEEE--ccCC--EEEEEeCCCCeEEEecCCC-CccEEEEeCCCCCceEEEEeCC-EEEEecCCCCE
Confidence 44442 33567899999 6541 5666666778899999854 3333332111223356677655 44445556788
Q ss_pred EEEEEcCCCCCc
Q psy10778 536 VIIWESSSHNRT 547 (556)
Q Consensus 536 V~vwdl~~~~~~ 547 (556)
|...|..+++..
T Consensus 236 V~~~d~~tg~~~ 247 (619)
T 3s94_A 236 ILACNKYTGEGL 247 (619)
T ss_dssp EEEEESSSCCCC
T ss_pred EEEEECCCCccc
Confidence 999998776544
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.50 E-value=0.0059 Score=60.34 Aligned_cols=198 Identities=9% Similarity=0.043 Sum_probs=123.3
Q ss_pred EEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccCCCeEeeC----C--CccEEEEEE---ccCCCEEEEEc---
Q psy10778 328 ATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCKPPTILLG----H--SACVTDLYL---CAGFSVAVSSS--- 394 (556)
Q Consensus 328 ~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~----h--~~~V~~l~~---s~~~~~l~sgs--- 394 (556)
-+++|.+....+..++ ..|+|..|+...+. .. .+ .+.+ . ...+.+|.| .++++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~----~~---~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQS----HF---NV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCC----EE---EE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCe----EE---EE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 4688988666666666 78999999875331 00 00 1111 1 124579999 68887777543
Q ss_pred ----------CCCcEEEEeCC---CCeEEEEeCCC-C----------CCCCeeEEEEeCCCCeEEEEeecCcCCC-CeEE
Q psy10778 395 ----------EDGTCLLWDIN---TIGYIREIPCV-D----------PNTPVSHVTMSETNGEIASVLQTTKTGG-SILR 449 (556)
Q Consensus 395 ----------~Dg~I~iwdl~---~~~~v~~l~~~-h----------~~~~V~~l~~sp~~~~i~s~s~~~~~~d-~~I~ 449 (556)
.+..+..+|+. +++.+...... . .......++..++|+..++.+ .. +.|.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s-----~~~~~I~ 162 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA-----LGMPAIA 162 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE-----ESSCEEE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC-----CCCCeEE
Confidence 26779999999 77766544320 0 013478999999999999888 66 7888
Q ss_pred EEEeCCcEEEEeec-------CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE--EEEec-CC--CCCCeEE
Q psy10778 450 LHTINAQLITSLAS-------ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH--LLTLN-TN--VALPVIA 517 (556)
Q Consensus 450 iwdi~g~~i~~~~~-------~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~--~~~~~-~~--h~~~V~~ 517 (556)
.++.+|+.+..+.. ....+.|++. |+| +.|++....|.|..+|+..... +..-. .. .-.....
T Consensus 163 rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~--pdg---~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dg 237 (334)
T 2p9w_A 163 RVSADGKTVSTFAWESGNGGQRPGYSGITFD--PHS---NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEK 237 (334)
T ss_dssp EECTTSCCEEEEEECCCCSSSCCSCSEEEEE--TTT---TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEE
T ss_pred EEeCCCCEEeeeeecCCCcccccCcceEEEe--CCC---CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCccc
Confidence 88888774443321 1236799999 899 7888777799999999874332 21110 00 1123444
Q ss_pred E-EEecCCCE-EEEEcCCCcEEEEEcCC
Q psy10778 518 V-TYSCDSQH-LYASNTEGLVIIWESSS 543 (556)
Q Consensus 518 l-~~s~dg~~-l~sgs~Dg~V~vwdl~~ 543 (556)
| ..-.+|+. |++....+.+.+.+...
T Consensus 238 ilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 238 IVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 3 33457777 44444555555544433
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.40 E-value=0.1 Score=58.34 Aligned_cols=190 Identities=8% Similarity=-0.077 Sum_probs=117.1
Q ss_pred EEeccCCCeEEEEeCCCC----CCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 296 ICWNECDNLIRLKMSKEL----PATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 296 l~~gs~Dg~I~lw~~~~~----~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+.+....+.|+.+++... ....++. ........+++.+.++.|+.+ ...+.|.+.+++.. ...+
T Consensus 439 Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~----------~~~~ 507 (791)
T 3m0c_C 439 YWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV----------KRKT 507 (791)
T ss_dssp EEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS----------SEEE
T ss_pred EEeeccceeEEEEeccCCCCCcceeEEEe-cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC----------eEEE
Confidence 333344566666666542 1122222 234556788888776555544 56678888887643 1122
Q ss_pred -eeCCCccEEEEEEccCCCEEEEEc-CC-CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCe
Q psy10778 371 -LLGHSACVTDLYLCAGFSVAVSSS-ED-GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSI 447 (556)
Q Consensus 371 -l~~h~~~V~~l~~s~~~~~l~sgs-~D-g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~ 447 (556)
+.........|++.|.+..|+.+. .. +.|.+.++........+.. . -.....|++++.++.|+.+.. ..+.
T Consensus 508 l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~-~-l~~P~GLavD~~~~~LYwaD~----~~~~ 581 (791)
T 3m0c_C 508 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-N-IQWPNGITLDLLSGRLYWVDS----KLHS 581 (791)
T ss_dssp EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS-S-CSCEEEEEEETTTTEEEEEET----TTTE
T ss_pred EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC-C-CCCceEEEEecCCCeEEEEeC----CCCc
Confidence 233445688999999766555544 23 6788888874333333333 2 367899999988888877753 5678
Q ss_pred EEEEEeCCcEEEEee-c---CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 448 LRLHTINAQLITSLA-S---ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 448 I~iwdi~g~~i~~~~-~---~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
|..++++|.....+. . -....+|++. . + +++++-...+.|...+..+++.+..+.
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~-~---~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF--E-D---KVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEE--T-T---EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEEecCCCceEEEecCCCccCCCCEEEEe--C-C---EEEEEECCCCEEEEEeCCCCcceEEee
Confidence 999999865444432 1 2345677765 3 3 577777778899988887776655554
No 292
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.35 E-value=0.0045 Score=69.16 Aligned_cols=224 Identities=9% Similarity=0.021 Sum_probs=117.7
Q ss_pred CeEEEEeCCCC-CCcce-EcCCCCCceEEEEEcCCCCEEEEEeCCC-----cEEEEEeeeccCcccccccCCCeEee-CC
Q psy10778 303 NLIRLKMSKEL-PATPV-IRPPLGATIATATTAPDCHTLWLGLTSG-----NILVYEYELNASTNKIEFCKPPTILL-GH 374 (556)
Q Consensus 303 g~I~lw~~~~~-~~~~~-~~~~h~~~V~~i~~s~dg~~l~tgs~Dg-----~I~vwd~~~~~~~~~~~~~~~~~~l~-~h 374 (556)
..|+++++.++ +.+.. +. .....++|+|||+.|+....|. .|.++++.++.. +....+. ..
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~-------~~~lv~~~~~ 269 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS-------EDVCLYEEHN 269 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG-------GCEEEEECCC
T ss_pred EEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch-------hcEEEEecCC
Confidence 46999999987 53221 11 1134678999999888877652 455555543210 1112222 22
Q ss_pred CccEEEEEEccCCCEEEEEcC---CCcEEEEeCCCCe-EE--EEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 375 SACVTDLYLCAGFSVAVSSSE---DGTCLLWDINTIG-YI--REIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 375 ~~~V~~l~~s~~~~~l~sgs~---Dg~I~iwdl~~~~-~v--~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
......+.|+|||+.|+..+. ...|.++|+.++. .. +.+.... ......+.|+. ++.|+..+.........|
T Consensus 270 ~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L 347 (751)
T 2xe4_A 270 PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYDVQMHG-TSHLVILTNEGGAVNHKL 347 (751)
T ss_dssp TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTCCEEEEEET-TTEEEEEECTTTCTTCEE
T ss_pred CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCceEEEeeee-CCEEEEEeCCCCCCCcEE
Confidence 344678899999997776542 3467888988752 22 4443302 34445555443 666666553210123467
Q ss_pred EEEEeCC--cEEE-EeecCC--CeEEEEEeeCCCCCcceEEEEEeCCCeE--EEEeC-------CCCeEEEEecCCCCCC
Q psy10778 449 RLHTINA--QLIT-SLASEL--RITSVTFSNAPEGVSQNVIVTGHSDGTI--QLWSG-------YKLAHLLTLNTNVALP 514 (556)
Q Consensus 449 ~iwdi~g--~~i~-~~~~~~--~i~~i~~s~~pdg~~~~~l~tg~~dg~I--~iwd~-------~~~~~~~~~~~~h~~~ 514 (556)
..+++.+ .... .+.+.. .+..+.+. . + .++++...+|.. .++++ ..++.+..+.......
T Consensus 348 ~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~-~---~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~ 421 (751)
T 2xe4_A 348 LIAPRGQPSDWSHVLVDHSEDVFMESIAVR--S-N---YLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIF 421 (751)
T ss_dssp EEEETTSTTCCCCEEECCCSSEEEEEEEEC--S-S---EEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSC
T ss_pred EEEcCCCcccceeeEECCCCCcEEEEEEEE--C-C---EEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCcee
Confidence 7777762 2222 233333 34455554 2 3 577778888864 45564 2333144443211122
Q ss_pred eEEEEE----ecCCC-EEEEEcCC---CcEEEEEcCCCC
Q psy10778 515 VIAVTY----SCDSQ-HLYASNTE---GLVIIWESSSHN 545 (556)
Q Consensus 515 V~~l~~----s~dg~-~l~sgs~D---g~V~vwdl~~~~ 545 (556)
+..+.+ ++++. ++++.+.. +.+..+|+.+++
T Consensus 422 ~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 422 TVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred EEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 334432 34554 44444332 467777776643
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.23 E-value=0.021 Score=56.39 Aligned_cols=159 Identities=14% Similarity=0.078 Sum_probs=106.3
Q ss_pred cEEEEEEccCCCEEEEEc-CCCcEEEEeCCCCeEEEEeCCCC------CCCCeeEEEE---eCCCCeEEEEeecC-----
Q psy10778 377 CVTDLYLCAGFSVAVSSS-EDGTCLLWDINTIGYIREIPCVD------PNTPVSHVTM---SETNGEIASVLQTT----- 441 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs-~Dg~I~iwdl~~~~~v~~l~~~h------~~~~V~~l~~---sp~~~~i~s~s~~~----- 441 (556)
---+++|.+....+..++ ..|+|..||...+........ . +...+..|.+ .|+++.+++.. .+
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~-~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~-~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVID-GASSNGDGEQQMSGLSLLTHDNSKRLFAVMK-NAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCT-TTCCSSCCSEEEEEEEESSSSSCCEEEEEEE-ETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecC-CccccCCCcceeeEEEEeccCCCCcEEEEEc-ccccccc
Confidence 344788987555555544 799999999986644433211 1 0114679999 68866665432 11
Q ss_pred ----cCCCCeEEEEEeC----CcEEEEeecC--------------CCeEEEEEeeCCCCCcceEEEEEeCC-CeEEEEeC
Q psy10778 442 ----KTGGSILRLHTIN----AQLITSLASE--------------LRITSVTFSNAPEGVSQNVIVTGHSD-GTIQLWSG 498 (556)
Q Consensus 442 ----~~~d~~I~iwdi~----g~~i~~~~~~--------------~~i~~i~~s~~pdg~~~~~l~tg~~d-g~I~iwd~ 498 (556)
.+.+..|..||+. ++.+...... .....++.. ++| +..++++.. +.|...+.
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD--~~G---naYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD--RDG---NSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC--TTS---CEEEEEEESSCEEEEECT
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC--CCC---CEEEeCCCCCCeEEEEeC
Confidence 0125789999988 6666555321 247788888 899 899999988 88888886
Q ss_pred CCCeEEEEecC-----CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 499 YKLAHLLTLNT-----NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 499 ~~~~~~~~~~~-----~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
. ++.+..+.. ......+.|+++|+|..|++...+|.|..+|+.+
T Consensus 167 d-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 167 D-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp T-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred C-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 4 333332211 1123467999999999999888899999999885
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.21 E-value=0.24 Score=53.82 Aligned_cols=189 Identities=7% Similarity=-0.097 Sum_probs=118.6
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEE-eCCCcEEEEEeeeccCcccccccCCCeEe-e
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLG-LTSGNILVYEYELNASTNKIEFCKPPTIL-L 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tg-s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-~ 372 (556)
+..+...++.|+.++.........+. ........+++...+..|+.+ ...+.|.+.+++.. ....+ .
T Consensus 51 lywtD~~~~~I~r~~~~g~~~~~v~~-~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~----------~~~~l~~ 119 (628)
T 4a0p_A 51 IYWTDISLKTISRAFMNGSALEHVVE-FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ----------HRQVLVW 119 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST----------TCEEEEC
T ss_pred EEEEECCCCeEEEEECCCCCcEEEEe-CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC----------cEEEEEe
Confidence 33444566788878776544433333 222456688888765555444 55677888776543 11222 2
Q ss_pred CCCccEEEEEEccCCCEEEEEc--CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEE
Q psy10778 373 GHSACVTDLYLCAGFSVAVSSS--EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRL 450 (556)
Q Consensus 373 ~h~~~V~~l~~s~~~~~l~sgs--~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~i 450 (556)
..-....+|++.|....|..+. ..+.|...++........+.. -.....|+++++++.|..+.. ..+.|..
T Consensus 120 ~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~---~~~P~GlalD~~~~~LY~aD~----~~~~I~~ 192 (628)
T 4a0p_A 120 KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN---VGRANGLTIDYAKRRLYWTDL----DTNLIES 192 (628)
T ss_dssp SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---CSSEEEEEEETTTTEEEEEET----TTTEEEE
T ss_pred CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC---CCCcceEEEccccCEEEEEEC----CCCEEEE
Confidence 3445678999998655555444 256777778764333223333 567899999998888877753 6788999
Q ss_pred EEeCCcEEEEe-ecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEe
Q psy10778 451 HTINAQLITSL-ASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTL 507 (556)
Q Consensus 451 wdi~g~~i~~~-~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~ 507 (556)
+|++|.....+ ..-.....+++. . + .++++-...+.|...|..+++....+
T Consensus 193 ~d~dG~~~~v~~~~l~~P~glav~--~-~---~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 193 SNMLGLNREVIADDLPHPFGLTQY--Q-D---YIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EETTSCSCEEEEECCSCEEEEEEE--T-T---EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EcCCCCceEEeeccCCCceEEEEE--C-C---EEEEecCCCCEEEEEECCCCCceEEE
Confidence 99985322222 233456688887 4 4 67777777889999997776544433
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.20 E-value=0.0015 Score=72.28 Aligned_cols=198 Identities=10% Similarity=-0.072 Sum_probs=114.0
Q ss_pred cCCCeEEEEeCCC----CCCcceEcCCCCCceEEEEEcCCC-CEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe-eC
Q psy10778 300 ECDNLIRLKMSKE----LPATPVIRPPLGATIATATTAPDC-HTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL-LG 373 (556)
Q Consensus 300 s~Dg~I~lw~~~~----~~~~~~~~~~h~~~V~~i~~s~dg-~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-~~ 373 (556)
...+.|+.+++.+ ......+. ........+++.+.+ +++++-...+.|.+++.... ....+ ..
T Consensus 425 ~~~~~I~~~~~~g~~~~~~~~~~i~-~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~----------~~~~l~~~ 493 (699)
T 1n7d_A 425 LSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV----------KRKTLFRE 493 (699)
T ss_dssp TTTTSBEEEESCCCCC-CCCCCBCC-SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC----------CEEEECCC
T ss_pred cCCCeEEEEecCCCCCCcceEEEEe-CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC----------ceEEEEeC
Confidence 4456777777654 12111211 112234567777544 44444455678888876543 11222 22
Q ss_pred CCccEEEEEEccCCCEEEEEcC--CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 374 HSACVTDLYLCAGFSVAVSSSE--DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 374 h~~~V~~l~~s~~~~~l~sgs~--Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.......|++.|.+..|+.+.. .+.|.+.++.. .....+.... -.....|+++++++.|+.+.. ..+.|..+
T Consensus 494 ~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~-l~~PnGlavd~~~~~LY~aD~----~~~~I~~~ 567 (699)
T 1n7d_A 494 QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN-IQWPNGITLDLLSGRLYWVDS----KLHSISSI 567 (699)
T ss_dssp SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSS-CSSCCCEEECTTTCCEEEEET----TTTEEEEE
T ss_pred CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCC-CCCccEEEEeccCCEEEEEec----CCCeEEEE
Confidence 2234567889986554444332 26788877753 3233332101 345678999998887776653 66789999
Q ss_pred EeCCcEEEEeec----CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe
Q psy10778 452 TINAQLITSLAS----ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS 521 (556)
Q Consensus 452 di~g~~i~~~~~----~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 521 (556)
+++|.....+.. -.....|++. .+ .++++....+.|..++..+++.+..+.. ....+++|++.
T Consensus 568 d~dG~~~~~~~~~~~~~~~P~glavd--~~----~lywtd~~~~~V~~~d~~~G~~~~~i~~-~~~~P~~i~v~ 634 (699)
T 1n7d_A 568 DVNGGNRKTILEDEKRLAHPFSLAVF--ED----KVFWTDIINEAIFSANRLTGSDVNLLAE-NLLSPEDMVLF 634 (699)
T ss_dssp CSSSSCCEEECCCSSSCSSCCCCEEE--TT----EEEEECSTTTCEEEEETTTEEEEECCCT-TCSSCCCCCBC
T ss_pred ccCCCceEEEEecCCcCCCceEeEEE--CC----EEEEEeCCCCeEEEEEccCCCceEEeec-CCCCCcEEEEe
Confidence 998654333321 1334566665 33 5777777788999999888988887753 22234455443
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.17 E-value=0.017 Score=59.95 Aligned_cols=158 Identities=8% Similarity=0.006 Sum_probs=97.2
Q ss_pred cEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC
Q psy10778 377 CVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN 454 (556)
Q Consensus 377 ~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~ 454 (556)
...+++|+++ ...|..+...+.|+.+|+.+++....... ......++++++++ |+.+..........+..++..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~---~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTN---IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCC---CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecC---CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 4568999984 34455444448999999987765544443 56789999999999 444431000001123333433
Q ss_pred CcEE--EEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCCCCeEEEEe-cCCCCCCeEEEEEecCCCEEE-E
Q psy10778 455 AQLI--TSLASELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTL-NTNVALPVIAVTYSCDSQHLY-A 529 (556)
Q Consensus 455 g~~i--~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~-~~~h~~~V~~l~~s~dg~~l~-s 529 (556)
+... ..+..-.....++++ + +| +++++-..++.|+.+|..++.....+ ..+....-..++++|+++.|+ +
T Consensus 216 ~~~~~~~~~~~~~~P~giavd--~~~G---~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVH--PQNG---KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEEC--TTTC---CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CCeeccccccccCCCCEEEEe--CCCC---eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 2111 122233455678888 7 66 66666667889999998777653332 212223345799999998555 4
Q ss_pred EcCCCcEEEEEcCC
Q psy10778 530 SNTEGLVIIWESSS 543 (556)
Q Consensus 530 gs~Dg~V~vwdl~~ 543 (556)
-...++|+.++...
T Consensus 291 d~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 291 YNGKHCIYRVDYNR 304 (433)
T ss_dssp ETTTTEEEEEEBCT
T ss_pred eCCCCEEEEEeCCC
Confidence 55568899988753
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.98 E-value=0.15 Score=50.49 Aligned_cols=189 Identities=11% Similarity=0.102 Sum_probs=109.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI 404 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl 404 (556)
..+..+.+.+++..++++ .+|.| |....+. .. -......+...+..+++.+++.+++.+...+..+-+|-
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG---~t----W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~ 191 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAI--YRTKDSG---KN----WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP 191 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCE--EEESSTT---SS----EEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT
T ss_pred CCeEEEEEECCCCEEEEe-CCccE--EEEcCCC---CC----CEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC
Confidence 457778777666666555 45643 3332211 10 01122344567889999999888777654443444442
Q ss_pred --CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeec-----CCCeEEEEEeeCC
Q psy10778 405 --NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLAS-----ELRITSVTFSNAP 476 (556)
Q Consensus 405 --~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~-----~~~i~~i~~s~~p 476 (556)
.+-+.+. .. . ...+..+++++++..++++ .++.+++.+.+ |+.-..... ...+.++++. +
T Consensus 192 gG~tW~~~~--~~-~-~~~~~~~~~~~~g~~~~~~------~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~--~ 259 (327)
T 2xbg_A 192 GQTAWEPHN--RT-T-SRRLHNMGFTPDGRLWMIV------NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR--T 259 (327)
T ss_dssp TCSSCEEEE--CC-S-SSCEEEEEECTTSCEEEEE------TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES--S
T ss_pred CCCceeECC--CC-C-CCccceeEECCCCCEEEEe------CCceEEEecCCCCCeeEeccCCcccCCcceEEEEec--C
Confidence 2223321 22 3 5678899999987665544 57787776544 443333321 2357888888 6
Q ss_pred CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC--CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEc
Q psy10778 477 EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT--NVALPVIAVTYSCDSQHLYASNTEGLVIIWES 541 (556)
Q Consensus 477 dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl 541 (556)
++ .+++++. +|.| ++....++.-..+.. .....+.++.|.++++ +++++.+|.|.-++-
T Consensus 260 ~~---~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 260 PN---EVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SS---CEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CC---EEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 66 5666655 6766 344444544333431 2235678898986554 666777898776653
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.92 E-value=0.065 Score=51.99 Aligned_cols=222 Identities=9% Similarity=-0.034 Sum_probs=108.7
Q ss_pred CeEEEEeCCCCCCcceEcCC-CCCceEEEEEcCCCCEEEEEeCC-----CcEEEEEeeeccCcccccccCCCeEeeCCCc
Q psy10778 303 NLIRLKMSKELPATPVIRPP-LGATIATATTAPDCHTLWLGLTS-----GNILVYEYELNASTNKIEFCKPPTILLGHSA 376 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~-h~~~V~~i~~s~dg~~l~tgs~D-----g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~ 376 (556)
..+.++|..+.+....-... ......++. .+++.++.|+.+ ..+.+||..+.... ..+.+..+.....
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~----~W~~~~~~p~~r~ 104 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG----VWYSVAPMNVRRG 104 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC----CCEEECCCSSCCB
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC----eeEECCCCCCCcc
Confidence 36777777665432221111 111112222 356777888765 35778887654200 0000111111111
Q ss_pred cEEEEEEccCCCEEEEEcCC-----CcEEEEeCCCCeEEEE--eCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 377 CVTDLYLCAGFSVAVSSSED-----GTCLLWDINTIGYIRE--IPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~D-----g~I~iwdl~~~~~v~~--l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
...++.. ++.+++.|+.+ ..+.++|+.+.+.... +.. . ......+.+ ++..++.|+.........+.
T Consensus 105 ~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 178 (301)
T 2vpj_A 105 LAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-A-REGAGLVVA--SGVIYCLGGYDGLNILNSVE 178 (301)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-C-CBSCEEEEE--TTEEEEECCBCSSCBCCCEE
T ss_pred ceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-C-cccceEEEE--CCEEEEECCCCCCcccceEE
Confidence 1222222 56777777644 3588999887754332 222 1 122222222 55666666532211235688
Q ss_pred EEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCeEEEEecC-CCCCCeEEEEE
Q psy10778 450 LHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLAHLLTLNT-NVALPVIAVTY 520 (556)
Q Consensus 450 iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~ 520 (556)
+||+....-..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+-...-.. ........+
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~-- 250 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRSGAGVALL---ND---HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT-- 250 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE---TT---EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--
T ss_pred EEeCCCCcEEeCCCCCcccccceEEEE---CC---EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--
Confidence 9998744333332 11222233333 34 678887764 4689999877654332211 111112222
Q ss_pred ecCCCEEEEEcCC-----CcEEEEEcCCC
Q psy10778 521 SCDSQHLYASNTE-----GLVIIWESSSH 544 (556)
Q Consensus 521 s~dg~~l~sgs~D-----g~V~vwdl~~~ 544 (556)
.-++++++.|+.+ ..+.+||+.+.
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 251 VLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 2367777777765 46788898763
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.90 E-value=0.5 Score=51.17 Aligned_cols=229 Identities=7% Similarity=-0.086 Sum_probs=134.2
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceE-cCCCCCceEEEEEcCCCCEEEEEe-CCCcEEEEEeeeccCcccccccCCCeEee
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVI-RPPLGATIATATTAPDCHTLWLGL-TSGNILVYEYELNASTNKIEFCKPPTILL 372 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~-~~~h~~~V~~i~~s~dg~~l~tgs-~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~ 372 (556)
+|..+. .+.|+..++......... .......+.++++.+.+..|+.+. ..+.|+.++.+.. .....+.
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~---------~~~~v~~ 388 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS---------GSQFVVT 388 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEEC
T ss_pred EEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC---------ccEEEEE
Confidence 444433 456777777654432222 112345678999998655655554 5677777776542 1112233
Q ss_pred CCCccEEEEEEccC-CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 373 GHSACVTDLYLCAG-FSVAVSSSEDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 373 ~h~~~V~~l~~s~~-~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.......++++... +++.++-+..+.|.+.++... ..+.+.... -...+.|+++|..+.|..+... ..+.|...
T Consensus 389 ~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~-l~~P~~iavdp~~G~ly~tD~g---~~~~I~r~ 463 (619)
T 3s94_A 389 AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKILISED-LEEPRAIVLDPMVGYMYWTDWG---EIPKIERA 463 (619)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECTT-CCSEEEEEEETTTTEEEEEECS---SSCEEEEE
T ss_pred CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEEEEECC-CCCeeeEEEEcCCCcEEEecCC---CCCEEEEE
Confidence 33356678999864 446666667889999998743 333332202 4678999999986777665410 23677777
Q ss_pred EeCCcEEEEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEE
Q psy10778 452 TINAQLITSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYA 529 (556)
Q Consensus 452 di~g~~i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~s 529 (556)
+++|.....+. .-...+.++++ +++. ++.++-+..+.|...++.... .+.+.........+++...+ .+.++
T Consensus 464 ~~dG~~~~~l~~~~l~~P~GlalD--~~~~--~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~l~~P~glav~~~-~ly~t 537 (619)
T 3s94_A 464 ALDGSDRVVLVNTSLGWPNGLALD--YDEG--KIYWGDAKTDKIEVMNTDGTG-RRVLVEDKIPHIFGFTLLGD-YVYWT 537 (619)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEE--TTTT--EEEEEETTTTEEEEEESSSCC-CEEEEECCCCSSCCEEEETT-EEEEE
T ss_pred ccCCCccEEEEeCCCCCCeeeEEc--ccCC--EEEEEECCCCEEEEEecCCCc-eEEEeccCCCCcEEEEEECC-EEEEe
Confidence 77765433332 23577899999 6441 555555566889999874332 22221111223346666543 34444
Q ss_pred EcCCCcEEEEEcCCC
Q psy10778 530 SNTEGLVIIWESSSH 544 (556)
Q Consensus 530 gs~Dg~V~vwdl~~~ 544 (556)
-...+.|...+..++
T Consensus 538 D~~~~~I~~~~k~~g 552 (619)
T 3s94_A 538 DWQRRSIERVHKRSA 552 (619)
T ss_dssp CTTSSCEEEEESSSC
T ss_pred ecCCCeEEEEEcCCC
Confidence 445677877777776
No 300
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.86 E-value=0.01 Score=65.09 Aligned_cols=202 Identities=10% Similarity=0.059 Sum_probs=110.6
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEEeeeccCcccccccCCCeEeeC-CCccEEEEEEccCCCEEEEEc-
Q psy10778 329 TATTAP-DCHTLWLGLTSG-----------NILVYEYELNASTNKIEFCKPPTILLG-HSACVTDLYLCAGFSVAVSSS- 394 (556)
Q Consensus 329 ~i~~s~-dg~~l~tgs~Dg-----------~I~vwd~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs- 394 (556)
++++.+ +++.++.|+.+. .+.+||..++.. ..+..+.. +.....++++..++++++.|+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w-------~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV-------SDRTVTVTKHDMFCPGISMDGNGQIVVTGGN 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB-------CCCEEEECSCCCSSCEEEECTTSCEEEECSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcE-------EeCcccCCCCCCccccccCCCCCCEEEeCCC
Confidence 455666 888888887543 477787765521 22233322 233344567788999999988
Q ss_pred CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEee-cCcCCCCeEEEEEeCCcEEEEeec------CCCe
Q psy10778 395 EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQ-TTKTGGSILRLHTINAQLITSLAS------ELRI 467 (556)
Q Consensus 395 ~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~-~~~~~d~~I~iwdi~g~~i~~~~~------~~~i 467 (556)
.+..+.+||..+.+....-.. +....-.+++..++++.++.|+. ++......+.+||.....-..+.. ...-
T Consensus 263 ~~~~v~~yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp STTCEEEEEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred CCCceEEecCcCCceeECCCC-CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc
Confidence 456899999988755433222 10222335566678888888872 221123578999987433333210 0000
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCC---------eEEEEeCCCCeEEEEecCC--------CCCCeEEEEEec-CCCEEEE
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDG---------TIQLWSGYKLAHLLTLNTN--------VALPVIAVTYSC-DSQHLYA 529 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg---------~I~iwd~~~~~~~~~~~~~--------h~~~V~~l~~s~-dg~~l~s 529 (556)
....+. .++ ++++.|+.+| .+..||..+.......... ....-.++.+.. ++++++.
T Consensus 342 ~~~~~~--~~~---~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~ 416 (656)
T 1k3i_A 342 KQGLYR--SDN---HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF 416 (656)
T ss_dssp TTGGGT--TTC---SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEE
T ss_pred ccceee--cCC---ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEE
Confidence 001111 233 4555555443 4677887666543322210 011234445543 6778888
Q ss_pred EcCCC-----------cEEEEEcCC
Q psy10778 530 SNTEG-----------LVIIWESSS 543 (556)
Q Consensus 530 gs~Dg-----------~V~vwdl~~ 543 (556)
|+.++ .|.+||..+
T Consensus 417 GG~~~~~~~~~~~~~~~v~~yd~~~ 441 (656)
T 1k3i_A 417 GGSPDYQDSDATTNAHIITLGEPGT 441 (656)
T ss_dssp CCBSSSSSSBCCCCEEEEECCSTTS
T ss_pred eCCCCCCCCCcCCcceEEEcCCCCC
Confidence 87543 577777655
No 301
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.67 E-value=0.21 Score=48.74 Aligned_cols=229 Identities=7% Similarity=-0.101 Sum_probs=111.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC----C---C----cEEEEEeeeccCccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLT----S---G----NILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~----D---g----~I~vwd~~~~~~~~~~~ 363 (556)
+++.|+ ..+..||..+++....-...........+...+++.++.|+. + . .+.+||..+.... ..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~--~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL--GM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE--EC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE--EC
Confidence 555666 578889988776543111111122333344457788888884 1 1 1555555443110 00
Q ss_pred ccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC--------CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAGFSVAVSSSED--------GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIA 435 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D--------g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~ 435 (556)
. .......+| ..+.+ ++.+++.|+.+ ..+.++|..+.+....-..+. ...-.+++. -++..++
T Consensus 83 ~-~~p~~r~~~----~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~-~~~~iyv 153 (315)
T 4asc_A 83 P-PLPSPRCLF----GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY-VVYGHTVLS-HMDLVYV 153 (315)
T ss_dssp C-CBSSCEESC----EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEE-ETTEEEE
T ss_pred C-CCCcchhce----eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC-cccceeEEE-ECCEEEE
Confidence 0 000111122 12222 56677777632 468899998875433212101 111112222 3455566
Q ss_pred EEee-cCcCCCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCCC-----eEEEEeCCCCeEEEE
Q psy10778 436 SVLQ-TTKTGGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSDG-----TIQLWSGYKLAHLLT 506 (556)
Q Consensus 436 s~s~-~~~~~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg-----~I~iwd~~~~~~~~~ 506 (556)
.|+. ........+.+||+....-..+. ....-.+++.. ++ ++++.|+.++ .+.+||..+.+-...
T Consensus 154 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 154 IGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH---DG---RIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp ECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TT---EEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred EeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE---CC---EEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 6653 11112357889998744333332 12222233333 45 6788877654 588899877654332
Q ss_pred ecC-CCCCCeEEEEEecCCCEEEEEcCCC--------------cEEEEEcCCC
Q psy10778 507 LNT-NVALPVIAVTYSCDSQHLYASNTEG--------------LVIIWESSSH 544 (556)
Q Consensus 507 ~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg--------------~V~vwdl~~~ 544 (556)
-.. ...... +++ .-++++++.|+.++ .+.+||+.+.
T Consensus 228 ~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 228 EAFPQERSSL-SLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp CCCSSCCBSC-EEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred CCCCCcccce-eEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 211 111111 222 22567777777532 4678888764
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.61 E-value=0.12 Score=50.13 Aligned_cols=229 Identities=9% Similarity=-0.022 Sum_probs=113.9
Q ss_pred eEEeccC--CCeEEEEeCCCCCCcceEcC-CCCCceEEEEEcCCCCEEEEEeCC----CcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNEC--DNLIRLKMSKELPATPVIRP-PLGATIATATTAPDCHTLWLGLTS----GNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~--Dg~I~lw~~~~~~~~~~~~~-~h~~~V~~i~~s~dg~~l~tgs~D----g~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+++.|+. ...+.++|..+.+....-.. .....-.++. -++..++.|+.+ ..+.+||..+.... .
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~-------~ 84 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWY-------S 84 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEE-------E
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEE-------E
Confidence 4555554 36788888876643322111 1111122222 256777888755 45677776543111 0
Q ss_pred CeEeeCCCccEEEEEEccCCCEEEEEcCC------CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecC
Q psy10778 368 PTILLGHSACVTDLYLCAGFSVAVSSSED------GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTT 441 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s~~~~~l~sgs~D------g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~ 441 (556)
+..+........++.+ ++++++.|+.+ ..+.+||..+.+....-..+. ...-.+++. -++..++.|+...
T Consensus 85 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~-~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT-QRCSHGMVE-ANGLIYVCGGSLG 160 (306)
T ss_dssp EECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS-CCBSCEEEE-ETTEEEEECCEES
T ss_pred CCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC-CcceeEEEE-ECCEEEEECCCCC
Confidence 0111111111122222 56777777755 468899999876544322201 111112222 2455666665332
Q ss_pred cCC----CCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCeEEEEecC
Q psy10778 442 KTG----GSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 442 ~~~----d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~~~~~~~~ 509 (556)
... ...+.+||+....-..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+-...-..
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 234 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV---KD---KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM 234 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT---EEEEECCEETTEEBCCEEEEETTTTEEEECCCC
T ss_pred CCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE---CC---EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC
Confidence 212 466889998754333332 12222233333 34 677777643 3588899877653322111
Q ss_pred -CCCCCeEEEEEecCCCEEEEEcCC-----CcEEEEEcCCC
Q psy10778 510 -NVALPVIAVTYSCDSQHLYASNTE-----GLVIIWESSSH 544 (556)
Q Consensus 510 -~h~~~V~~l~~s~dg~~l~sgs~D-----g~V~vwdl~~~ 544 (556)
........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 235 p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 235 PWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp SCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 11112222222 67788888754 46888998773
No 303
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.60 E-value=0.24 Score=47.96 Aligned_cols=192 Identities=11% Similarity=0.055 Sum_probs=95.0
Q ss_pred CCCEEEEEeCCC-----cEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC-----cEEEEeC
Q psy10778 335 DCHTLWLGLTSG-----NILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG-----TCLLWDI 404 (556)
Q Consensus 335 dg~~l~tgs~Dg-----~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg-----~I~iwdl 404 (556)
++..++.|+.++ .+.+||..+..... +..+........++.+ ++.+++.|+.++ .+.+||+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 131 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS-------VANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNI 131 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEE-------ECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEET
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceee-------CCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeC
Confidence 567778887553 46677765431110 0111111111122222 567777777553 5778898
Q ss_pred CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC--CCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCC
Q psy10778 405 NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT--GGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGV 479 (556)
Q Consensus 405 ~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~--~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~ 479 (556)
.+.+....-..+. ...-.+++.. ++..++.|+..... ....+.+||+....-..+. ....-.+++.. ++
T Consensus 132 ~~~~W~~~~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~- 205 (302)
T 2xn4_A 132 KSNEWFHVAPMNT-RRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NN- 205 (302)
T ss_dssp TTTEEEEECCCSS-CCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT-
T ss_pred CCCeEeecCCCCC-cccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CC-
Confidence 8776443322201 1111222222 45555555532211 1346888998744333321 12222233333 45
Q ss_pred cceEEEEEeCC-----CeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCC-----cEEEEEcCCC
Q psy10778 480 SQNVIVTGHSD-----GTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEG-----LVIIWESSSH 544 (556)
Q Consensus 480 ~~~~l~tg~~d-----g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg-----~V~vwdl~~~ 544 (556)
++++.|+.+ ..+.+||..+.+-...-.......-.+++ .-++++++.|+.++ .+.+||+.+.
T Consensus 206 --~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 206 --LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp --EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred --EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 688888754 36889998776543322111111111222 23677777777654 4899998763
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.43 E-value=0.11 Score=54.50 Aligned_cols=161 Identities=7% Similarity=0.027 Sum_probs=97.9
Q ss_pred cEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCeEEEEeCCCC--CCCCeeEEEE-------eCCCCeEEEEeecCcC--
Q psy10778 377 CVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIGYIREIPCVD--PNTPVSHVTM-------SETNGEIASVLQTTKT-- 443 (556)
Q Consensus 377 ~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h--~~~~V~~l~~-------sp~~~~i~s~s~~~~~-- 443 (556)
....|+++|. +.++++....+.|++.|+.++.....+.. . .......++| +++++.|+++......
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~-~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI-NTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC-TTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc-CccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 4678999983 44555544457788999987665544433 1 0135889999 9999977766521000
Q ss_pred CCCeEEEEEeCC--cEE-----EEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCCeEEEEeCC-------CCeE-----
Q psy10778 444 GGSILRLHTINA--QLI-----TSLASELRITSVTFSNAP-EGVSQNVIVTGHSDGTIQLWSGY-------KLAH----- 503 (556)
Q Consensus 444 ~d~~I~iwdi~g--~~i-----~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~I~iwd~~-------~~~~----- 503 (556)
....|.+++... ... ..+..-.....++++ | ++ .++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavd--p~~g---~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIH--PING---ELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEEC--TTTC---CEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEc--CCCC---eEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 012366665332 321 122222345677888 6 45 677777788999999986 4443
Q ss_pred ------EEE-ecCCCCCCeEEEEEecCCCEEE-EEcCCCcEEEEEcCC
Q psy10778 504 ------LLT-LNTNVALPVIAVTYSCDSQHLY-ASNTEGLVIIWESSS 543 (556)
Q Consensus 504 ------~~~-~~~~h~~~V~~l~~s~dg~~l~-sgs~Dg~V~vwdl~~ 543 (556)
... +..+.....+.|+|+|+|+.|+ +-+...+|+.++...
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 112 2212345578999999999544 445677888876543
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.41 E-value=0.44 Score=47.65 Aligned_cols=189 Identities=11% Similarity=0.025 Sum_probs=109.1
Q ss_pred CCCeEEEEeCCCC--CCcceEcCC-----CCCceEEEEEcC--CCC-EEEEE-eC--CCcEEEEEeeeccCcccccccCC
Q psy10778 301 CDNLIRLKMSKEL--PATPVIRPP-----LGATIATATTAP--DCH-TLWLG-LT--SGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 301 ~Dg~I~lw~~~~~--~~~~~~~~~-----h~~~V~~i~~s~--dg~-~l~tg-s~--Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
.+|.|.++|.++. +....-..+ ..-....+.+.+ ++. +|+++ .. +.+|.+|+++..... . ..
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~---~--~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS---L--LH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE---E--EE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE---E--EE
Confidence 5788999998732 221111111 122456666654 444 34444 33 568899998764211 1 22
Q ss_pred CeEeeCC-CccEEEEEEccCCCEEEEEc-----------------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeC
Q psy10778 368 PTILLGH-SACVTDLYLCAGFSVAVSSS-----------------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSE 429 (556)
Q Consensus 368 ~~~l~~h-~~~V~~l~~s~~~~~l~sgs-----------------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp 429 (556)
+..+.+. -...+++.+.++|+..++.. ..|.+.-+|.. +....... -...+.++|+|
T Consensus 156 ~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~---l~~pNGia~sp 230 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEG---FDFANGINISP 230 (355)
T ss_dssp EEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEE---ESSEEEEEECT
T ss_pred EeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecC---CcccCcceECC
Confidence 3344432 24578999999998877764 12445555543 32222222 34578999999
Q ss_pred CCCeEEEEeecCcCCCCeEEEEEeC--CcEE--EEeecCCCeEEEEEeeCC-CCCcceEEEEEeCC-CeEEEEeCC--CC
Q psy10778 430 TNGEIASVLQTTKTGGSILRLHTIN--AQLI--TSLASELRITSVTFSNAP-EGVSQNVIVTGHSD-GTIQLWSGY--KL 501 (556)
Q Consensus 430 ~~~~i~s~s~~~~~~d~~I~iwdi~--g~~i--~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~d-g~I~iwd~~--~~ 501 (556)
|++.+..+.. ..+.|..|+++ |.+. ..+......-.+++. + +| ++.+++..+ +.|..|+.. .+
T Consensus 231 Dg~~lYvadt----~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD--~e~G---~lwva~~~~g~~v~~~~P~~~~~ 301 (355)
T 3sre_A 231 DGKYVYIAEL----LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVD--PVTG---DLWVGCHPNGMRIFFYDAENPPG 301 (355)
T ss_dssp TSSEEEEEEG----GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEEC--TTTC---CEEEEEESCHHHHHSCCTTSCCC
T ss_pred CCCEEEEEeC----CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEe--CCCC---cEEEEecCCceEEEEECCCCCCC
Confidence 9998887763 56899999986 4432 233345667788888 7 48 777756533 344444433 24
Q ss_pred eEEEEec
Q psy10778 502 AHLLTLN 508 (556)
Q Consensus 502 ~~~~~~~ 508 (556)
..+..+.
T Consensus 302 s~v~rI~ 308 (355)
T 3sre_A 302 SEVLRIQ 308 (355)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 5555554
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.37 E-value=0.13 Score=52.36 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=100.4
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCCC--CCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-Cc--
Q psy10778 382 YLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCVD--PNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-AQ-- 456 (556)
Q Consensus 382 ~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h--~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~-- 456 (556)
..+.+|..++.+- ++.||.-++......+.+..++ .-..|..+..+|+|.++|..+ +..|.+..+. +.
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g------~~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN------DNEIFVMEVPWGYSN 99 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC------SSEEEEEECCTTCSC
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec------CCeEEEEEecCcccc
Confidence 3455666666653 4778888887544455554410 023688999999999999985 6788888874 21
Q ss_pred ----------EEEEee-------cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC--eEEEEecC--------
Q psy10778 457 ----------LITSLA-------SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL--AHLLTLNT-------- 509 (556)
Q Consensus 457 ----------~i~~~~-------~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~--~~~~~~~~-------- 509 (556)
...++. ....|..+.|+ |-+.....|++-..|+.|++||+... ++. .+..
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWH--Pl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d 176 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFH--PKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLD 176 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEEC--TTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESC
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEec--cccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCC
Confidence 122332 24689999999 66654479999999999999999642 122 2221
Q ss_pred CCCCCeEEEEEecCCCEEEEEc--CCCcEEEE
Q psy10778 510 NVALPVIAVTYSCDSQHLYASN--TEGLVIIW 539 (556)
Q Consensus 510 ~h~~~V~~l~~s~dg~~l~sgs--~Dg~V~vw 539 (556)
.....|.+++|..++-.|+..+ ++|.|+-.
T Consensus 177 ~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 177 ARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 2236789999999887777755 77887654
No 307
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.36 E-value=0.88 Score=44.68 Aligned_cols=233 Identities=10% Similarity=0.065 Sum_probs=150.0
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++|--. ..++.++|+++...+..... ...|.-=.|-.+ +.|+-.+ +..|+-|++.... .+.+.+.-|
T Consensus 80 ViALra-g~~LQiFnletK~klks~~~--~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s--------~P~kvFdR~ 146 (365)
T 2xzh_A 80 VIALKA-GKTLQIFNIEMKSKMKAHTM--TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES--------QPVKMFDRH 146 (365)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEEEEEC--SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTC--------CCEEEEECC
T ss_pred EEEEec-CCeEEEechHHhhhhcceec--CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCC--------CCceeeecc
Confidence 444433 68899999998766655542 456777778755 5666555 4689999987531 344444444
Q ss_pred ----CccEEEEEEccCCCEEEEEc-------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEe--CCC-CeEEEEeec
Q psy10778 375 ----SACVTDLYLCAGFSVAVSSS-------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMS--ETN-GEIASVLQT 440 (556)
Q Consensus 375 ----~~~V~~l~~s~~~~~l~sgs-------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~s--p~~-~~i~s~s~~ 440 (556)
...|..-..+++.++++..+ -.|.+.+|..++ +.-+.+++ | .+....+.+. +.. ..++.+...
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieG-h-aa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEG-H-AASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECC-S-EEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeee-e-eeeeEEEecCCCCCCceEEEEEEec
Confidence 34677778888888765433 237888999885 45667777 6 3322222221 111 233333321
Q ss_pred CcCCCCeEEEEEeC----Cc-----EEEEe--e---cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 441 TKTGGSILRLHTIN----AQ-----LITSL--A---SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 441 ~~~~d~~I~iwdi~----g~-----~i~~~--~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
. ..+++++.++. |. ....+ . ..+...++..+ +.. .++..-+.-|.|++||+.++.++..
T Consensus 224 ~--~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs--~ky---gviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 224 Q--AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS--EKH---DVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp T--TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEE--TTT---TEEEEEETTSEEEEEETTTCCEEEE
T ss_pred C--CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEec--ccC---CEEEEEeCCcEEEEEEcccCcEEEE
Confidence 1 34689998883 21 11111 1 24566788888 444 5888888999999999999999988
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCeee
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKFL 551 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~~ 551 (556)
-+ -...+|-..+-+.+..-++.....|.|.--.+++...+|-+.
T Consensus 297 nr-IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivpyi~ 340 (365)
T 2xzh_A 297 NR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYIT 340 (365)
T ss_dssp EE-CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHHHHH
T ss_pred ec-cCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEehhhh
Confidence 77 345777766666665667777899999999988877666543
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.18 E-value=1.1 Score=44.03 Aligned_cols=225 Identities=8% Similarity=0.073 Sum_probs=132.5
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC--CccE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH--SACV 378 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h--~~~V 378 (556)
.+.+|.+.|+.++.........-. +.-.+|..+.+|.-. ..++.|+|+++. ..+..| ...|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK------------~klks~~~~e~V 109 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMK------------SKMKAHTMTDDV 109 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTT------------EEEEEEECSSCE
T ss_pred CCCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHh------------hhhcceecCCcc
Confidence 344788889887554333222222 233578888887766 688999999875 333333 3456
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCC-CeEEEEeCCCCC---CCCeeEEEEeCCCCeEEEEeecC--cCCCCeEEEEE
Q psy10778 379 TDLYLCAGFSVAVSSSEDGTCLLWDINT-IGYIREIPCVDP---NTPVSHVTMSETNGEIASVLQTT--KTGGSILRLHT 452 (556)
Q Consensus 379 ~~l~~s~~~~~l~sgs~Dg~I~iwdl~~-~~~v~~l~~~h~---~~~V~~l~~sp~~~~i~s~s~~~--~~~d~~I~iwd 452 (556)
.-=.|-.+..+-+. + +..|.-|++.. ..+++.+.. |. ...|..-..+++.++++..+-.. +.-.|.+.+|+
T Consensus 110 vfWkWis~~~L~lV-T-~taVyHWs~~~~s~P~kvFdR-~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 186 (365)
T 2xzh_A 110 TFWKWISLNTVALV-T-DNAVYHWSMEGESQPVKMFDR-HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 186 (365)
T ss_dssp EEEEECSSSEEEEE-E-SSEEEEEESSTTCCCEEEEEC-CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEecCCCeEEEE-c-CCcEEEEcccCCCCCceeeec-chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEe
Confidence 66666655443333 2 46799999974 345555554 41 35677778889999887665321 11346788888
Q ss_pred eCCcEEEEeecCCC-eEEEEEeeCCCCCcceEEEEEeC---CCeEEEEeCCCC---e------EEEEecC--CCCCCeEE
Q psy10778 453 INAQLITSLASELR-ITSVTFSNAPEGVSQNVIVTGHS---DGTIQLWSGYKL---A------HLLTLNT--NVALPVIA 517 (556)
Q Consensus 453 i~g~~i~~~~~~~~-i~~i~~s~~pdg~~~~~l~tg~~---dg~I~iwd~~~~---~------~~~~~~~--~h~~~V~~ 517 (556)
.+.+.-+.++.... ...+.....+.. ..+++.+.. .+++++.++... . .+..+-. ....-..+
T Consensus 187 ~er~~sQ~ieGhaa~F~~~~~~g~~~~--~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVa 264 (365)
T 2xzh_A 187 VDRKVSQPIEGHAASFAQFKMEGNAEE--STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 264 (365)
T ss_dssp TTTTEEEEECCSEEEEEEECCTTCSSC--EEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEE
T ss_pred ecccccceeeeeeeeeEEEecCCCCCC--ceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEE
Confidence 87655555432211 111111100111 123333332 268888887332 1 1111111 12344668
Q ss_pred EEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 518 VTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 518 l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
+..|+....++.-+.-|-|+++|+.++.++
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 899999999999999999999999997654
No 309
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.10 E-value=0.54 Score=45.81 Aligned_cols=227 Identities=8% Similarity=-0.024 Sum_probs=108.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeC----CCc-------EEEEEeeeccCccccc
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLT----SGN-------ILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~----Dg~-------I~vwd~~~~~~~~~~~ 363 (556)
+++.|+. .+..||..+.+....-...........+...++..++.|+. ++. +.+||..+....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~---- 91 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV---- 91 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE----
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE----
Confidence 5666664 37888887765443211111122223334457788888883 121 555555433110
Q ss_pred ccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC-------CcEEEEeCCCCeEEEEeCCCCCCCCe-eEEEEeCCCCeEE
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAGFSVAVSSSED-------GTCLLWDINTIGYIREIPCVDPNTPV-SHVTMSETNGEIA 435 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-------g~I~iwdl~~~~~v~~l~~~h~~~~V-~~l~~sp~~~~i~ 435 (556)
.+..+.........+.+ ++.+.+.|+.+ ..+.++|+.+.+....-.. . .... .+++. .++..++
T Consensus 92 ---~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p-~~r~~~~~~~-~~~~iyv 163 (318)
T 2woz_A 92 ---GLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL-P-IKVYGHNVIS-HNGMIYC 163 (318)
T ss_dssp ---ECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC-S-SCEESCEEEE-ETTEEEE
T ss_pred ---ECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC-C-CcccccEEEE-ECCEEEE
Confidence 00111111111122222 56777777654 3578889987765433222 1 1111 12222 3455556
Q ss_pred EEeecC-cCCCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCeEEEE
Q psy10778 436 SVLQTT-KTGGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLAHLLT 506 (556)
Q Consensus 436 s~s~~~-~~~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~~~~~ 506 (556)
.|+... ......+.+||+....-..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+-...
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH---KG---KIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT---EEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred EcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE---CC---EEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 655321 112356889998744333332 12222233333 35 677777643 3577888876553222
Q ss_pred --ecCCCCCCeEEEEEecCCCEEEEEcCC--------------CcEEEEEcCCC
Q psy10778 507 --LNTNVALPVIAVTYSCDSQHLYASNTE--------------GLVIIWESSSH 544 (556)
Q Consensus 507 --~~~~h~~~V~~l~~s~dg~~l~sgs~D--------------g~V~vwdl~~~ 544 (556)
+. ...... +++ .-++++++.|+.+ ..+.+||+.+.
T Consensus 238 ~~~p-~~r~~~-~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 238 TEFP-QERSSI-SLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CCCS-SCCBSC-EEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred CCCC-Ccccce-EEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 21 111111 222 2356777777654 35788888773
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.02 E-value=3.3 Score=48.17 Aligned_cols=229 Identities=10% Similarity=0.070 Sum_probs=124.4
Q ss_pred ceEEeccC-CCeEEEEeCCCCCCcceEcCCCCCceEEEEEc--CCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 294 GMICWNEC-DNLIRLKMSKELPATPVIRPPLGATIATATTA--PDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 294 ~~l~~gs~-Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s--~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
.+++.|.+ |++++++++.+.+.......+......++.+. ....+|..|-.||.+..+.++.. .+..... ...
T Consensus 572 ~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~--tg~l~d~--r~~ 647 (1158)
T 3ei3_A 572 PLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIE--TGLLSDR--KKV 647 (1158)
T ss_dssp SEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTT--TCCEEEE--EEE
T ss_pred cEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCC--CCccccc--eeE
Confidence 38899997 99999999986554443333222233444332 23467899999999887776532 1111110 011
Q ss_pred eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEE-EEeCCCCCCCCeeE-EEEeCC--CCeEEEEeecCcCCCC
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYI-REIPCVDPNTPVSH-VTMSET--NGEIASVLQTTKTGGS 446 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v-~~l~~~h~~~~V~~-l~~sp~--~~~i~s~s~~~~~~d~ 446 (556)
.-| ..++.-..+...+..-+.+..+....++.-+ ++.. ..+.. ..+.. ..|+.. .+-++.. .++
T Consensus 648 ~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~----~~v~~~~~F~se~~~~g~v~~------~~~ 715 (1158)
T 3ei3_A 648 TLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNL----KEVNYMCPLNSDGYPDSLALA------NNS 715 (1158)
T ss_dssp ECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSS----SCCCEEEEECCSSSTTEEEEE------CSS
T ss_pred EcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccCh----HHhceEeccCcccCCCcEEEE------cCC
Confidence 222 3344444444444333333334444444433 2322 22322 22332 334332 2334444 355
Q ss_pred eEEEEEeC---CcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeC----------------------------------
Q psy10778 447 ILRLHTIN---AQLITSLASELRITSVTFSNAPEGVSQNVIVTGHS---------------------------------- 489 (556)
Q Consensus 447 ~I~iwdi~---g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~---------------------------------- 489 (556)
.+++..++ .-.+..+.....+..++++ |+. +.++++..
T Consensus 716 ~LrI~~i~~~~~~~~~~ipL~~Tprri~y~--~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1158)
T 3ei3_A 716 TLTIGTIDEIQKLHIRTVPLYESPRKICYQ--EVS---QCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFS 790 (1158)
T ss_dssp CEEEEEECCSSSEEEEEEECSSEEEEEEEE--GGG---TEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC-
T ss_pred ceEEEEecccCCeeEEEEeCCCCceEEEEc--CCC---CEEEEEEEeccccccccccchhhhhhhhhhhhhccccccccc
Confidence 68888774 3345555667778888888 443 33322210
Q ss_pred ---------------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEe---cC-CCEEEEEc----------CCCcEEEEE
Q psy10778 490 ---------------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYS---CD-SQHLYASN----------TEGLVIIWE 540 (556)
Q Consensus 490 ---------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s---~d-g~~l~sgs----------~Dg~V~vwd 540 (556)
.+.|++.|-.+.+.+..+.......+.+++.. .+ ..++++|+ ..|+|++++
T Consensus 791 ~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~ 870 (1158)
T 3ei3_A 791 SSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQ 870 (1158)
T ss_dssp ---------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEE
T ss_pred ccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEE
Confidence 13477888777887777665444556666543 22 46888876 358899999
Q ss_pred cCC
Q psy10778 541 SSS 543 (556)
Q Consensus 541 l~~ 543 (556)
+.+
T Consensus 871 v~~ 873 (1158)
T 3ei3_A 871 YSD 873 (1158)
T ss_dssp EET
T ss_pred EEC
Confidence 863
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.97 E-value=0.62 Score=46.60 Aligned_cols=198 Identities=10% Similarity=0.062 Sum_probs=111.0
Q ss_pred EEEEEcCCCCEEEEE------------eCCCcEEEEEeeeccCcccccccCCCeEeeC-----CCccEEEEEEcc--CCC
Q psy10778 328 ATATTAPDCHTLWLG------------LTSGNILVYEYELNASTNKIEFCKPPTILLG-----HSACVTDLYLCA--GFS 388 (556)
Q Consensus 328 ~~i~~s~dg~~l~tg------------s~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~~s~--~~~ 388 (556)
-.++..++|..++++ ..+|.|.++|........ +.+ .+.+ ..-....+.+.+ ++.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-----~~l-~~~g~~~~~~~f~PhGi~~~~d~dg~ 126 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-----SEL-EIIGNTLDISSFNPHGISTFIDDDNT 126 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-----EEC-EEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-----EEE-EccCCCCCcCceeeeeeEEEECCCCc
Confidence 345566766444443 168889999876421111 111 1222 223566777755 354
Q ss_pred --EEEEEcC--CCcEEEEeCCCC----eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeec--C----------cCCCCeE
Q psy10778 389 --VAVSSSE--DGTCLLWDINTI----GYIREIPCVDPNTPVSHVTMSETNGEIASVLQT--T----------KTGGSIL 448 (556)
Q Consensus 389 --~l~sgs~--Dg~I~iwdl~~~----~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~--~----------~~~d~~I 448 (556)
+++.-.. +.++-+|++... ..+.++.+ ..-...+.+++.++|...++...- . ....+.|
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 3444333 567888776542 33455655 324568899999998766654310 0 0023455
Q ss_pred EEEEeCCcEEEEeecCCCeEEEEEeeCCCCCcceEEEE-EeCCCeEEEEeCCC-CeE--EEEecCCCCCCeEEEEEec-C
Q psy10778 449 RLHTINAQLITSLASELRITSVTFSNAPEGVSQNVIVT-GHSDGTIQLWSGYK-LAH--LLTLNTNVALPVIAVTYSC-D 523 (556)
Q Consensus 449 ~iwdi~g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~t-g~~dg~I~iwd~~~-~~~--~~~~~~~h~~~V~~l~~s~-d 523 (556)
.-+|. ++.......-...+.++|+ ||+ +.|++ -+..+.|..|++.. ++. .+.+. .....-.+++.+ +
T Consensus 206 yr~d~-~~~~~~~~~l~~pNGia~s--pDg---~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~PDGi~vD~e~ 277 (355)
T 3sre_A 206 TYYSP-NDVRVVAEGFDFANGINIS--PDG---KYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVT 277 (355)
T ss_dssp EEECT-TCCEEEEEEESSEEEEEEC--TTS---SEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTT
T ss_pred EEEEC-CeEEEeecCCcccCcceEC--CCC---CEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCCCceEEEeCCC
Confidence 55554 3322222334677999999 888 55554 45678999999853 332 23343 246678899999 5
Q ss_pred CCEEEEEcCC-CcEEEEE
Q psy10778 524 SQHLYASNTE-GLVIIWE 540 (556)
Q Consensus 524 g~~l~sgs~D-g~V~vwd 540 (556)
|.+.+++..+ +.|..|+
T Consensus 278 G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 278 GDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp CCEEEEEESCHHHHHSCC
T ss_pred CcEEEEecCCceEEEEEC
Confidence 9887766533 3444343
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.91 E-value=1.5 Score=43.10 Aligned_cols=188 Identities=7% Similarity=-0.008 Sum_probs=101.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10778 324 GATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd 403 (556)
...+.++.+.+ +..+ .++.+|.| +....+...= +.+.....+...+..+.+.+++..++.+. +|.|.. .
T Consensus 79 ~~~~~~i~~~~-~~~~-~~g~~g~i--~~S~DgG~tW-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S 147 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGW-IVGEPPIM--LHTTDGGQSW-----SQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-T 147 (327)
T ss_dssp CCEEEEEEEET-TEEE-EEEETTEE--EEESSTTSSC-----EECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-E
T ss_pred CccEEEEEecC-CeEE-EEECCCeE--EEECCCCCCc-----eECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-E
Confidence 44688898876 3444 44556644 3332221110 00111112334567788777777666654 554432 2
Q ss_pred CCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEE-EEeCCcEEEE--eecCCCeEEEEEeeCCCCCc
Q psy10778 404 INTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRL-HTINAQLITS--LASELRITSVTFSNAPEGVS 480 (556)
Q Consensus 404 l~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~i-wdi~g~~i~~--~~~~~~i~~i~~s~~pdg~~ 480 (556)
...|+.-..+..+. ...+..+++.+++..++++. .+.+.. .|-.|..-.. ......+..+++. +++
T Consensus 148 ~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~------~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~--~~g-- 216 (327)
T 2xbg_A 148 KDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS------RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFT--PDG-- 216 (327)
T ss_dssp SSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET------TSSEEEEECTTCSSCEEEECCSSSCEEEEEEC--TTS--
T ss_pred cCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC------CCcEEEEeCCCCCceeECCCCCCCccceeEEC--CCC--
Confidence 22343333332214 56789999999877776653 444433 3332332221 2345678888888 777
Q ss_pred ceEEEEEeCCCeEEEEeCCCCeEEEEecCC---CCCCeEEEEEecCCCEEEEEcCCCcE
Q psy10778 481 QNVIVTGHSDGTIQLWSGYKLAHLLTLNTN---VALPVIAVTYSCDSQHLYASNTEGLV 536 (556)
Q Consensus 481 ~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~---h~~~V~~l~~s~dg~~l~sgs~Dg~V 536 (556)
.++ .++.+|.+++.+...++.-..+... ....+.++++.+++..++++. +|.|
T Consensus 217 -~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 217 -RLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp -CEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred -CEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 555 4455788877643334433333211 224588999998887776655 6666
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.88 E-value=0.67 Score=46.23 Aligned_cols=204 Identities=9% Similarity=0.002 Sum_probs=107.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC---CCEE-EEEcCC----
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG---FSVA-VSSSED---- 396 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l-~sgs~D---- 396 (556)
.....+++.|+|+++++ ..+|.|++++ .+. ..... . +............|+++|+ +..| ++-+..
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~--~~~~~-~-~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGR--LSTYA-E-LSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTE--EEEEE-E-CCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCC--ccEee-c-ceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 34679999999985554 5669888887 221 11000 0 0011223456889999998 4444 443322
Q ss_pred -CcEEEEeCCCCe-----E-EEEeC--CCCCCCCeeEEEEeCCCCeEEEEeecC--------cCCCCeEEEEEeCCcE--
Q psy10778 397 -GTCLLWDINTIG-----Y-IREIP--CVDPNTPVSHVTMSETNGEIASVLQTT--------KTGGSILRLHTINAQL-- 457 (556)
Q Consensus 397 -g~I~iwdl~~~~-----~-v~~l~--~~h~~~~V~~l~~sp~~~~i~s~s~~~--------~~~d~~I~iwdi~g~~-- 457 (556)
+.|..++...+. . +..+. ... ......++|.|+|...++.+... ....+.|.-++.+|..
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~-~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~ 182 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHG-LHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAP 182 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTC-CCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCC-CcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCC
Confidence 678888876431 1 22243 101 23457899999996666543211 0022566666665521
Q ss_pred -----------EEEe-ecCCCeEEEEEeeCC-CCCcceEEEEEeCCCe--------EEEEeCCC----------------
Q psy10778 458 -----------ITSL-ASELRITSVTFSNAP-EGVSQNVIVTGHSDGT--------IQLWSGYK---------------- 500 (556)
Q Consensus 458 -----------i~~~-~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg~--------I~iwd~~~---------------- 500 (556)
...+ ........++|+ + +| .++++-...+. |.+.....
T Consensus 183 ~npf~~~~~~~~~i~a~G~rnp~g~a~d--~~~g---~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~ 257 (352)
T 2ism_A 183 GNPFLGRRGARPEVYSLGHRNPQGLAWH--PKTG---ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRY 257 (352)
T ss_dssp TCTTTTCTTSCTTEEEECCSEECCCEEC--TTTC---CEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTS
T ss_pred CCcccCCCCCCccEEEEcCCCcccEEEE--CCCC---CEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCC
Confidence 0111 112345678888 6 56 55555433332 33322100
Q ss_pred CeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 501 LAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 501 ~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
..++..+. +......++| .+|.++++....+.|...++...
T Consensus 258 ~~p~~~~~--~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 258 RDPLYFWP--QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp CCCSEECT--TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEE
T ss_pred cCCeEecC--CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCC
Confidence 01222222 2245677787 46777777667778887777653
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.84 E-value=0.5 Score=45.83 Aligned_cols=149 Identities=5% Similarity=-0.045 Sum_probs=77.3
Q ss_pred CCCEEEEEcCC-----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEE
Q psy10778 386 GFSVAVSSSED-----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITS 460 (556)
Q Consensus 386 ~~~~l~sgs~D-----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~ 460 (556)
++++++.|+.+ ..+.+||+.+.+....-..+.+......+.+ ++..++.|+.........+.+||+....-..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56777776643 4688999987654432221010112222222 4555566553221123568889987543333
Q ss_pred ee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCeEEEEecC-CCCCCeEEEEEecCCCEEEEEc
Q psy10778 461 LA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLAHLLTLNT-NVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 461 ~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs 531 (556)
+. ....-.+++.. ++ .+++.|+.+ ..+.+||+.+.+-...-.. ...... +++. -++++++.|+
T Consensus 199 ~~~~p~~r~~~~~~~~---~~---~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i~v~GG 270 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL---HN---CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL-GITV-HQGRIYVLGG 270 (308)
T ss_dssp CCCCSSCCBSCEEEEE---TT---EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECC
T ss_pred CCCCCCccccceEEEE---CC---EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce-EEEE-ECCEEEEEcC
Confidence 32 11222233333 34 677887754 4688999877654322111 111111 2222 2577777777
Q ss_pred CC-----CcEEEEEcCCC
Q psy10778 532 TE-----GLVIIWESSSH 544 (556)
Q Consensus 532 ~D-----g~V~vwdl~~~ 544 (556)
.+ ..+.+||+.+.
T Consensus 271 ~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp BCSSCBCCEEEEEETTTT
T ss_pred cCCCcccceEEEEcCCCC
Confidence 54 35788988764
No 315
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.75 E-value=2.7 Score=46.36 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=109.5
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10778 324 GATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd 403 (556)
...|.++....+| .|..|+.+| +..||..+... . .. .......|.++.. .++. |..|+.+ -+..+|
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f----~--~~---~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~ 127 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRY----E--QP---ETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQ 127 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEE----C--CC---SCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEE----E--Cc---ccCCCceEEEEEe-cCCc-EEEEcCC-cceeEe
Confidence 3468888877765 677777665 67787654311 0 00 0111235777654 3554 5555555 578889
Q ss_pred CCCCeEEEEe---CCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEeec-------CCCeEEEEEe
Q psy10778 404 INTIGYIREI---PCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSLAS-------ELRITSVTFS 473 (556)
Q Consensus 404 l~~~~~v~~l---~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~~~-------~~~i~~i~~s 473 (556)
..+++..... .... ...|.++....++...+ ++ .+ -|..++........+.. ...|.++...
T Consensus 128 ~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~lWi-gt-----~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 199 (758)
T 3ott_A 128 LQSRKLTSFDTRRNGLP-NNTIYSIIRTKDNQIYV-GT-----YN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLED 199 (758)
T ss_dssp TTTCCEEEECHHHHCCS-CSCEEEEEECTTCCEEE-EE-----TT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEE
T ss_pred CCCCeEEEeccCCCCcC-CCeEEEEEEcCCCCEEE-Ee-----CC-CHhhCccCCCceEEecCCCccccccceeEEEEEE
Confidence 8765543220 1101 35688888877766554 44 33 47778876444433321 1247788776
Q ss_pred eCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 474 NAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 474 ~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.++ ..|..|+. +.+..+|..+++...... .....|.++....+|.+.+. +.+ -+.+++..+.
T Consensus 200 --~~~---~~lWigt~-~Gl~~~~~~~~~~~~~~~-l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 200 --TTR---QCVWIGTE-GYLFQYFPSTGQIKQTEA-FHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTT 261 (758)
T ss_dssp --TTT---TEEEEEEE-EEEEEEETTTTEEEEEEE-EEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTS
T ss_pred --CCC---CEEEEEEC-CCCeEEcCCCCeEEeccC-CCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCC
Confidence 555 45555664 468888877665322111 11356888888888876654 444 4777876553
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.66 E-value=0.93 Score=43.56 Aligned_cols=189 Identities=10% Similarity=-0.036 Sum_probs=93.2
Q ss_pred eEEeccCC-----CeEEEEeCCCCC---CcceEcCC-CCCceEEEEEcCCCCEEEEEeCCC-----cEEEEEeeeccCcc
Q psy10778 295 MICWNECD-----NLIRLKMSKELP---ATPVIRPP-LGATIATATTAPDCHTLWLGLTSG-----NILVYEYELNASTN 360 (556)
Q Consensus 295 ~l~~gs~D-----g~I~lw~~~~~~---~~~~~~~~-h~~~V~~i~~s~dg~~l~tgs~Dg-----~I~vwd~~~~~~~~ 360 (556)
+++.|+.+ +.+.++|..+.+ ....-... ....-.++.. +++.++.|+.++ .+.+||..+...
T Consensus 65 l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-- 140 (301)
T 2vpj_A 65 IYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW-- 140 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE--
T ss_pred EEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE--
Confidence 66666654 468889988766 43332111 1111222222 567777877543 466677554311
Q ss_pred cccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC-----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEE
Q psy10778 361 KIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED-----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIA 435 (556)
Q Consensus 361 ~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~ 435 (556)
+.+..+......-.++.+ ++++++.|+.+ ..+.++|+.+.+....-..+. ...-.+++.. ++..++
T Consensus 141 -----~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~-~~~i~v 211 (301)
T 2vpj_A 141 -----SMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT-KRSGAGVALL-NDHIYV 211 (301)
T ss_dssp -----EEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE-TTEEEE
T ss_pred -----EECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCc-ccccceEEEE-CCEEEE
Confidence 111111111111122222 56777777654 468899998876543322201 1111122222 455556
Q ss_pred EEeecCcCCCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCe
Q psy10778 436 SVLQTTKTGGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLA 502 (556)
Q Consensus 436 s~s~~~~~~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~ 502 (556)
.|+.........+.+||+....-..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL---RG---RLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT---EEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE---CC---EEEEEcCcCCCcccccEEEEcCCCCe
Confidence 665322112457899999754333332 11122233332 45 677777755 357788876554
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.56 E-value=2.7 Score=48.85 Aligned_cols=215 Identities=10% Similarity=0.060 Sum_probs=117.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCC------CCEEEEEeC-CCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPD------CHTLWLGLT-SGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~d------g~~l~tgs~-Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
.++.++ .+.+.++.+..+.+.......-...|+|+++.+. ++++++|.. |++|+|+++.... .. .
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~----~~---~ 596 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE----LL---H 596 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC----EE---E
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC----eE---E
Confidence 444443 5677777665443322222223567999998763 479999996 9999999986431 00 0
Q ss_pred CeEeeCCCccEEEEEEc--cCCCEEEEEcCCCcEEEEeC--CCCeEE--EE-eCCCCCCCCeeEEEEeCCCCeEEEEeec
Q psy10778 368 PTILLGHSACVTDLYLC--AGFSVAVSSSEDGTCLLWDI--NTIGYI--RE-IPCVDPNTPVSHVTMSETNGEIASVLQT 440 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s--~~~~~l~sgs~Dg~I~iwdl--~~~~~v--~~-l~~~h~~~~V~~l~~sp~~~~i~s~s~~ 440 (556)
...+.+ .....++.+. ....+|..|-.||.+.-+.+ .+|+.. ++ .-+ ..++.-..+...+..-+.++
T Consensus 597 ~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG---~~pv~L~~~~~~~~~~V~a~-- 670 (1158)
T 3ei3_A 597 KEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG---TQPTVLRTFRSLSTTNVFAC-- 670 (1158)
T ss_dssp EEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC---SSCCEEEEEESSSCEEEEEE--
T ss_pred EEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC---CCceEEEEEeeCCceeEEEE--
Confidence 111211 1223333332 22347888999998866544 455443 22 233 45666666665554433333
Q ss_pred CcCCCCeEEEEEeCCcEEEEeecCCCe-EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC--eEEEEecCCCCCCeEE
Q psy10778 441 TKTGGSILRLHTINAQLITSLASELRI-TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL--AHLLTLNTNVALPVIA 517 (556)
Q Consensus 441 ~~~~d~~I~iwdi~g~~i~~~~~~~~i-~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~--~~~~~~~~~h~~~V~~ 517 (556)
.+....+|.-+++...+--.-..+ ....|+. +... +-++..+ ++.++|..+... -.++++. -...++.
T Consensus 671 ---s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~s--e~~~-~g~v~~~-~~~LrI~~i~~~~~~~~~~ip--L~~Tprr 741 (1158)
T 3ei3_A 671 ---SDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNS--DGYP-DSLALAN-NSTLTIGTIDEIQKLHIRTVP--LYESPRK 741 (1158)
T ss_dssp ---SSSCEEEEESSSSEEEEEBSSSCCCEEEEECC--SSST-TEEEEEC-SSCEEEEEECCSSSEEEEEEE--CSSEEEE
T ss_pred ---CCCCEEEEEcCCceEEeccChHHhceEeccCc--ccCC-CcEEEEc-CCceEEEEecccCCeeEEEEe--CCCCceE
Confidence 345555565566654332222233 3334542 1111 2244333 455888876433 2455565 3578999
Q ss_pred EEEecCCCEEEEEcC
Q psy10778 518 VTYSCDSQHLYASNT 532 (556)
Q Consensus 518 l~~s~dg~~l~sgs~ 532 (556)
++++|+.+.++.+..
T Consensus 742 i~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 742 ICYQEVSQCFGVLSS 756 (1158)
T ss_dssp EEEEGGGTEEEEEEE
T ss_pred EEEcCCCCEEEEEEE
Confidence 999998887766553
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.56 E-value=2.5 Score=43.22 Aligned_cols=232 Identities=10% Similarity=0.066 Sum_probs=150.3
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++|--. ..++.++|+++...+..... ...|.-=.|-.+ +.|+..+ +..|+-|++.... .+++.+.-|
T Consensus 79 iiALra-g~~lQiFnle~K~klks~~~--~e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s--------~P~kvFdR~ 145 (494)
T 1bpo_A 79 VIALKA-GKTLQIFNIEMKSKMKAHTM--TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES--------QPVKMFDRH 145 (494)
T ss_dssp CEEEEE-TTEEEEEETTTTEEEEEEEC--SSCCCEEEEEET-TEEEEEC-SSEEEEEESSSSC--------CCEEEEECC
T ss_pred EEEEec-CCeEEEEchHHhhhhcceec--CCCceEEEecCC-CeEEEEc-CCeeEEecccCCC--------Cchhheecc
Confidence 444432 68999999998765555542 345666667654 5666555 4689999986531 344444444
Q ss_pred ----CccEEEEEEccCCCEEEEEc-------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCC--C-CeEEEEeec
Q psy10778 375 ----SACVTDLYLCAGFSVAVSSS-------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSET--N-GEIASVLQT 440 (556)
Q Consensus 375 ----~~~V~~l~~s~~~~~l~sgs-------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~--~-~~i~s~s~~ 440 (556)
...|..-..+++.++++..+ -.|.+.+|+.++ +.-+.+++ | .+....+.+..+ . ..++.+...
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieG-h-aa~F~~~~~~g~~~~~~lf~fa~r~ 222 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEG-H-AASFAQFKMEGNAEESTLFCFAVRG 222 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECC-S-EEEEEEEECTTCSSEEEEEEEEECS
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchhee-e-eeeeEEEecCCCCCCceEEEEEEec
Confidence 34677788888888766432 247888999885 45667777 6 333333322211 1 233333311
Q ss_pred CcCCCCeEEEEEeCCc---------EEEEe--e---cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 441 TKTGGSILRLHTINAQ---------LITSL--A---SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 441 ~~~~d~~I~iwdi~g~---------~i~~~--~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
. ..+.+++.++... ....+ . ..+...++..+ +.. .++..-+.-|.|++||+.++.++..
T Consensus 223 ~--~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs--~ky---gviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 223 Q--AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS--EKH---DVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp T--TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE--TTT---TEEEEEETTSEEEEEETTTCCEEEE
T ss_pred C--CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec--ccC---CEEEEEecCceEEEEecccceeeee
Confidence 1 3478999988411 11111 1 14566788888 544 5888889999999999999999988
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
-. -...+|-..+-+.+..-++.....|.|.--.+.+...+|-+
T Consensus 296 nr-Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpyi 338 (494)
T 1bpo_A 296 NR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYI 338 (494)
T ss_dssp EE-CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHHH
T ss_pred ec-ccCCceEEecccCCCCcEEEEccCceEEEEEEccccchhhh
Confidence 77 34677777777766667777789999999888887766544
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.44 E-value=0.93 Score=45.15 Aligned_cols=191 Identities=9% Similarity=-0.055 Sum_probs=97.4
Q ss_pred CCceEEEEEcCC---CCEEEEEeCC------CcEEEEEeeeccCcccccccCCCeEee---CCCccEEEEEEccCCCEEE
Q psy10778 324 GATIATATTAPD---CHTLWLGLTS------GNILVYEYELNASTNKIEFCKPPTILL---GHSACVTDLYLCAGFSVAV 391 (556)
Q Consensus 324 ~~~V~~i~~s~d---g~~l~tgs~D------g~I~vwd~~~~~~~~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~l~ 391 (556)
......++++|+ +..|+++... +.|..++...... .... ..+..+. +.......++|.|+|.+.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~-~~~~--~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv 150 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERG-VLDR--VVLDGIPARPHGLHSGGRIAFGPDGMLYV 150 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCE-EEEE--EEEEEECCCTTCCCCCCCEEECTTSCEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCc-CceE--EEEEeCCCCCCCCcCCceEEECCCCCEEE
Confidence 456789999998 5566555432 5566666542200 0000 0111122 1112235899999998766
Q ss_pred EEcCC-------------CcEEEEeCCC--------------CeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCC
Q psy10778 392 SSSED-------------GTCLLWDINT--------------IGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTG 444 (556)
Q Consensus 392 sgs~D-------------g~I~iwdl~~--------------~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~ 444 (556)
+.+.. |.|.-++... ...+... + + .....++|+|+.+.|.++... .
T Consensus 151 ~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G-~--rnp~g~a~d~~~g~l~v~d~g---~ 223 (352)
T 2ism_A 151 TTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSL-G-H--RNPQGLAWHPKTGELFSSEHG---P 223 (352)
T ss_dssp ECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEE-C-C--SEECCCEECTTTCCEEEEEEC---C
T ss_pred EECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEE-c-C--CCcccEEEECCCCCEEEEEcC---C
Confidence 64321 4555555442 0011111 1 1 235678999954445444321 1
Q ss_pred CC-------eEEEEEeCC-----------------cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC
Q psy10778 445 GS-------ILRLHTINA-----------------QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK 500 (556)
Q Consensus 445 d~-------~I~iwdi~g-----------------~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~ 500 (556)
+. .|.+....+ .++..+........++|. +| .++++....+.|...++..
T Consensus 224 ~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~---~G---~l~v~~~~~~~v~~v~~~~ 297 (352)
T 2ism_A 224 SGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF---RG---DLYVAGLRGQALLRLVLEG 297 (352)
T ss_dssp ------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEE---TT---EEEEEETTTTEEEEEEEEE
T ss_pred CCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEE---CC---EEEEEECCCCEEEEEEECC
Confidence 11 233322111 111222223356677775 46 6777766777888777643
Q ss_pred Ce----E--EEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 501 LA----H--LLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 501 ~~----~--~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
.. . ...+. .....++.+++.|||.++++..
T Consensus 298 ~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 298 ERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp ETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceeecchheec-ccCCCeeEEEECCCCcEEEEEe
Confidence 32 1 12221 1236789999999998777654
No 320
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.19 E-value=3.2 Score=42.36 Aligned_cols=225 Identities=6% Similarity=0.054 Sum_probs=131.9
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCC--ccE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHS--ACV 378 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~--~~V 378 (556)
.+.+|.+.|+.++.........-. +.-.+|..+.+|.-. ..++.|+|+++. ..+..|. ..|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad----sAIMnP~~~iiALra-g~~lQiFnle~K------------~klks~~~~e~V 108 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMK------------SKMKAHTMTDDV 108 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS----EEEECSSSSCEEEEE-TTEEEEEETTTT------------EEEEEEECSSCC
T ss_pred CCCeEEEEECCCCCcceecccccc----eeeeCCCCcEEEEec-CCeEEEEchHHh------------hhhcceecCCCc
Confidence 445888889887554433222222 334568777777765 689999999875 3333332 345
Q ss_pred EEEEEccCCCEEEEEcCCCcEEEEeCCC-CeEEEEeCCCCC---CCCeeEEEEeCCCCeEEEEeecC--cCCCCeEEEEE
Q psy10778 379 TDLYLCAGFSVAVSSSEDGTCLLWDINT-IGYIREIPCVDP---NTPVSHVTMSETNGEIASVLQTT--KTGGSILRLHT 452 (556)
Q Consensus 379 ~~l~~s~~~~~l~sgs~Dg~I~iwdl~~-~~~v~~l~~~h~---~~~V~~l~~sp~~~~i~s~s~~~--~~~d~~I~iwd 452 (556)
.-=.|-.+.. |+-.+ +..|.-|++.. ..+++.+.. |. ...|..-..+++.++++..+-.. +.-.|.+.+|+
T Consensus 109 vfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR-~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS 185 (494)
T 1bpo_A 109 TFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDR-HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYS 185 (494)
T ss_dssp CEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEEC-CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheec-chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEee
Confidence 5555654443 33332 56799999964 245555554 41 35677778889999887665321 11346788888
Q ss_pred eCCcEEEEeecC-CCeEEEEEeeCCCCCcceEEEEEeC---CCeEEEEeCCCC--------eEEEEecC---CCCCCeEE
Q psy10778 453 INAQLITSLASE-LRITSVTFSNAPEGVSQNVIVTGHS---DGTIQLWSGYKL--------AHLLTLNT---NVALPVIA 517 (556)
Q Consensus 453 i~g~~i~~~~~~-~~i~~i~~s~~pdg~~~~~l~tg~~---dg~I~iwd~~~~--------~~~~~~~~---~h~~~V~~ 517 (556)
.+.+.-+.++.. .....+... .+.....+++.+.. .+++++.++... +....+.. ....-..+
T Consensus 186 ~er~~sQ~ieGhaa~F~~~~~~--g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPva 263 (494)
T 1bpo_A 186 VDRKVSQPIEGHAASFAQFKME--GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (494)
T ss_dssp STTCCEEEECCSEEEEEEEECT--TCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEE
T ss_pred ccccccchheeeeeeeEEEecC--CCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeE
Confidence 875444444321 111112111 01111133444433 278999887432 11112111 11344668
Q ss_pred EEEecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 518 VTYSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 518 l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
+..|+....++..+.-|-|+++|+.++..+
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEecccCCEEEEEecCceEEEEecccceee
Confidence 999999999999999999999999997654
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.94 E-value=1.8 Score=41.60 Aligned_cols=189 Identities=12% Similarity=0.010 Sum_probs=93.3
Q ss_pred eEEeccCC----CeEEEEeCCCCCCcceEcCCC-CCceEEEEEcCCCCEEEEEeCC------CcEEEEEeeeccCccccc
Q psy10778 295 MICWNECD----NLIRLKMSKELPATPVIRPPL-GATIATATTAPDCHTLWLGLTS------GNILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~gs~D----g~I~lw~~~~~~~~~~~~~~h-~~~V~~i~~s~dg~~l~tgs~D------g~I~vwd~~~~~~~~~~~ 363 (556)
+++.|+.+ ..+.++|..+.+....-.... ...-.++.+ +++.++.|+.+ ..+.+||..+.......
T Consensus 58 lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~- 134 (306)
T 3ii7_A 58 VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP- 134 (306)
T ss_dssp EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-
T ss_pred EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-
Confidence 56666644 678888887765433322111 111222222 66778888765 35777776654111000
Q ss_pred ccCCCeEeeCCCccEEEEEEccCCCEEEEEcC---------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeE
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAGFSVAVSSSE---------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEI 434 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~---------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i 434 (556)
........| .++. .++++++.|+. -..+.+||+.+.+....-..+. ...-.+++.. ++..+
T Consensus 135 --~~p~~r~~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~~i~ 204 (306)
T 3ii7_A 135 --SMLTQRCSH----GMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE-ARKNHGLVFV-KDKIF 204 (306)
T ss_dssp --CCSSCCBSC----EEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE-TTEEE
T ss_pred --CCcCCccee----EEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc-hhhcceEEEE-CCEEE
Confidence 000111122 1222 25666676653 3458899998875443322201 1111222222 45566
Q ss_pred EEEeecCcCCCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCe
Q psy10778 435 ASVLQTTKTGGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLA 502 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~ 502 (556)
+.|+.........+.+||+....-..+. ....-.+++.. ++ .+++.|+.+ ..+.+||..+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV---GS---IVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE---TT---EEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE---CC---EEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 6655322111356888998754333332 11111223332 35 788888754 568889987654
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.92 E-value=2.2 Score=42.41 Aligned_cols=204 Identities=8% Similarity=-0.017 Sum_probs=110.2
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC----CCEEEEEcC---C-
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG----FSVAVSSSE---D- 396 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~----~~~l~sgs~---D- 396 (556)
.....++|.|+|+++ ++..+|.|++++. .+ . .... . +............|+++|+ +.+.++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G--~-~~~~-~-~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP-SG--K-KLVA-S-FDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS-SC--E-EEEE-E-CCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CC--c-eEee-c-cceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 346789999998754 4566698888862 22 1 1110 0 0011222356889999997 444444332 3
Q ss_pred ---CcEEEEeCCCC-------eEE-EEeCCCCCCCCeeEEEEeCCCCeEEEEeecC--------cCCCCeEEEEEeCCc-
Q psy10778 397 ---GTCLLWDINTI-------GYI-REIPCVDPNTPVSHVTMSETNGEIASVLQTT--------KTGGSILRLHTINAQ- 456 (556)
Q Consensus 397 ---g~I~iwdl~~~-------~~v-~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~--------~~~d~~I~iwdi~g~- 456 (556)
+.|..++.... +.+ ..+.. ........|+|.|+|...++.+... ....+.|.-++.+|+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~-~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~ 180 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPG-AYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP 180 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEEC-CSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCC-CCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC
Confidence 56777876643 111 22322 1023457799999997666644211 012356666666654
Q ss_pred ---------EEEEeecCCCeEEEEEeeCC-CCCcceEEEEEeCCC---eEEEEeCC--------CC--------eEEEEe
Q psy10778 457 ---------LITSLASELRITSVTFSNAP-EGVSQNVIVTGHSDG---TIQLWSGY--------KL--------AHLLTL 507 (556)
Q Consensus 457 ---------~i~~~~~~~~i~~i~~s~~p-dg~~~~~l~tg~~dg---~I~iwd~~--------~~--------~~~~~~ 507 (556)
.+... .......++|+ + +| +++++-...+ .|.+...- .+ .++..+
T Consensus 181 p~~npf~~~~i~a~-G~rnp~Gla~d--~~~g---~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 254 (354)
T 3a9g_A 181 PADNPFPNSPIWSY-GHRNPQGIDWH--RASG---VMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDT 254 (354)
T ss_dssp CTTSSSTTCCEEEE-CCSCCCEEEEC--TTTC---CEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCCCCcEEEE-ccCCcceEEEe--CCCC---CEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeec
Confidence 12222 22345688999 7 56 5555433222 23332210 00 122333
Q ss_pred cCCCCCCeEEEEEe-------cCCCEEEEEcCCCcEEEEEcCC
Q psy10778 508 NTNVALPVIAVTYS-------CDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 508 ~~~h~~~V~~l~~s-------~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
. ........++|. .+|.++++.-..+.|...++..
T Consensus 255 ~-~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 255 G-SETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp T-TCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred C-CCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 1 123467888883 5777777777778888888875
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.68 E-value=0.7 Score=47.07 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=78.3
Q ss_pred EEEeCCCCeEEEEeecCcCCCCeEEEEEeC-CcEEEEeecC-----CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeC
Q psy10778 425 VTMSETNGEIASVLQTTKTGGSILRLHTIN-AQLITSLASE-----LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSG 498 (556)
Q Consensus 425 l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~~~-----~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~ 498 (556)
...+.++..++.+ .++.||.-++. +...+.++.+ ..+..+..+ |+| ++||..+. ..|.|-.+
T Consensus 26 ~~~~~n~t~i~~a------~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlS--psG---~lLAl~g~-~~V~Vv~L 93 (452)
T 3pbp_A 26 IFSSQNGTRIVFI------QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISS--TSG---DLLCLFND-NEIFVMEV 93 (452)
T ss_dssp EEEETTTTEEEEE------ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEEC--TTS---SEEEEECS-SEEEEEEC
T ss_pred EEEEcCCCEEEEE------ECCEEEEEECCCCCcceEEecCcccccCceeEEEEC--CCC---CEEEEecC-CeEEEEEe
Confidence 3445567777776 47888888886 4434444333 257889999 999 78888764 57888877
Q ss_pred CCCe------------EEEEecCC-----CCCCeEEEEEecC---CCEEEEEcCCCcEEEEEcCCCCCcCe
Q psy10778 499 YKLA------------HLLTLNTN-----VALPVIAVTYSCD---SQHLYASNTEGLVIIWESSSHNRTPK 549 (556)
Q Consensus 499 ~~~~------------~~~~~~~~-----h~~~V~~l~~s~d---g~~l~sgs~Dg~V~vwdl~~~~~~~~ 549 (556)
..+. ..+.+..+ ...+|..+.|+|- +..|++-.+|+.|++||+......|.
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~ 164 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI 164 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE
T ss_pred cCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc
Confidence 5221 22333321 3578999999995 47899999999999999987544443
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.64 E-value=2.5 Score=40.53 Aligned_cols=190 Identities=13% Similarity=0.004 Sum_probs=91.7
Q ss_pred eEEeccCC-----CeEEEEeCCCCCCcceEcCCC-CCceEEEEEcCCCCEEEEEeCCC-----cEEEEEeeeccCccccc
Q psy10778 295 MICWNECD-----NLIRLKMSKELPATPVIRPPL-GATIATATTAPDCHTLWLGLTSG-----NILVYEYELNASTNKIE 363 (556)
Q Consensus 295 ~l~~gs~D-----g~I~lw~~~~~~~~~~~~~~h-~~~V~~i~~s~dg~~l~tgs~Dg-----~I~vwd~~~~~~~~~~~ 363 (556)
+++.|+.+ ..+.++|..+.+....-.... ...-.++.+ +++.++.|+.++ .+.+||..+....
T Consensus 64 lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~---- 137 (302)
T 2xn4_A 64 VFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF---- 137 (302)
T ss_dssp EEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE----
T ss_pred EEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe----
Confidence 66666644 357788887664333221111 111122222 567888887654 3556665433110
Q ss_pred ccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC-------CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEE
Q psy10778 364 FCKPPTILLGHSACVTDLYLCAGFSVAVSSSED-------GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIAS 436 (556)
Q Consensus 364 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-------g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s 436 (556)
.+..+........++. .++++++.|+.+ ..+.+||+.+.+....-..+. ...-.+++.. ++..++.
T Consensus 138 ---~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~~iyv~ 210 (302)
T 2xn4_A 138 ---HVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMST-RRSGAGVGVL-NNLLYAV 210 (302)
T ss_dssp ---EECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE-TTEEEEE
T ss_pred ---ecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcc-ccccccEEEE-CCEEEEE
Confidence 0011111111112222 256677776542 458899998875443322201 1111222222 4556666
Q ss_pred EeecCcCCCCeEEEEEeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCCC-----eEEEEeCCCCeE
Q psy10778 437 VLQTTKTGGSILRLHTINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSDG-----TIQLWSGYKLAH 503 (556)
Q Consensus 437 ~s~~~~~~d~~I~iwdi~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg-----~I~iwd~~~~~~ 503 (556)
|+.........+.+||+....-..+. ....-.+++.. ++ ++++.|+.++ .+.+||..+.+-
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV---NG---LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TT---EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE---CC---EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 65322112357889998754333332 11112223333 45 6788877653 488888876653
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.39 E-value=4.5 Score=40.17 Aligned_cols=198 Identities=10% Similarity=0.026 Sum_probs=101.8
Q ss_pred CCceEEEEEcCC---CCEEEEEeC----C----CcEEEEEeeeccCcccccccCC-CeEee-CCCccEEEEEEccCCCEE
Q psy10778 324 GATIATATTAPD---CHTLWLGLT----S----GNILVYEYELNASTNKIEFCKP-PTILL-GHSACVTDLYLCAGFSVA 390 (556)
Q Consensus 324 ~~~V~~i~~s~d---g~~l~tgs~----D----g~I~vwd~~~~~~~~~~~~~~~-~~~l~-~h~~~V~~l~~s~~~~~l 390 (556)
......++++|+ +..|+++.. + +.|..|+..... ......+. +..+. +.......|+|.|+|.+.
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~--~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGST--FKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLY 149 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSS--CCEEEEEEEEEEEECCSSCCCCCEEECTTSCEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCC--cCcCccEEEEEcCCCCCCcCCceEEECCCCcEE
Confidence 356889999997 555555443 2 455555554320 01100011 11122 111234579999999877
Q ss_pred EEEcC-------------CCcEEEEeCCCC---------eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeE
Q psy10778 391 VSSSE-------------DGTCLLWDINTI---------GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSIL 448 (556)
Q Consensus 391 ~sgs~-------------Dg~I~iwdl~~~---------~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I 448 (556)
++.+. .|.|.-.+.... ..+... + + .....++|+|+.+.|.++.... .....|
T Consensus 150 vt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~-G-~--rnp~Gla~d~~~g~l~v~d~g~-~~~dei 224 (354)
T 3a9g_A 150 ITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSY-G-H--RNPQGIDWHRASGVMVATEHGP-VGHDEV 224 (354)
T ss_dssp EECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEE-C-C--SCCCEEEECTTTCCEEEEECCS-SSCCEE
T ss_pred EEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEE-c-c--CCcceEEEeCCCCCEEEEecCC-CCCcEE
Confidence 76432 144555554321 012111 2 1 2356899999544455443110 011234
Q ss_pred EEEEeCC-----------------cEEEEe-ecCCCeEEEEEeeC-----CCCCcceEEEEEeCCCeEEEEeCCCC-eEE
Q psy10778 449 RLHTINA-----------------QLITSL-ASELRITSVTFSNA-----PEGVSQNVIVTGHSDGTIQLWSGYKL-AHL 504 (556)
Q Consensus 449 ~iwdi~g-----------------~~i~~~-~~~~~i~~i~~s~~-----pdg~~~~~l~tg~~dg~I~iwd~~~~-~~~ 504 (556)
.+...-+ .++..+ ........++|... .+| .++++....+.|...++... +..
T Consensus 225 ~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G---~l~v~~~~~~~v~~~~~~~~g~~~ 301 (354)
T 3a9g_A 225 NIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG---WLLIACLRGSMLAAVNFGDNMEVR 301 (354)
T ss_dssp EEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT---EEEEEETTTTEEEEEEECGGGCEE
T ss_pred EEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC---cEEEEEcCCCEEEEEEECCCCccc
Confidence 3332111 122222 22346778888421 355 67777777788888887643 332
Q ss_pred --EEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 505 --LTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 505 --~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
..+..+....+..+++.|||.+.++..
T Consensus 302 ~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 302 KISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 233212246799999999998777664
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.33 E-value=4.6 Score=40.04 Aligned_cols=70 Identities=11% Similarity=0.077 Sum_probs=45.0
Q ss_pred CCCeEEEEEeeC-----CCCCcceEEEEEeCCCeEEEEeCCCCeEEEE--ecCCCCCCeEEEEEecCCCEEEEEc-CCCc
Q psy10778 464 ELRITSVTFSNA-----PEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT--LNTNVALPVIAVTYSCDSQHLYASN-TEGL 535 (556)
Q Consensus 464 ~~~i~~i~~s~~-----pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~--~~~~h~~~V~~l~~s~dg~~l~sgs-~Dg~ 535 (556)
......++|... -+| .++++....+.|...++..++.... +.......+..+++.|||.++++.. .+|.
T Consensus 270 ~~ap~G~~~y~g~~fp~~~g---~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 270 SPAVSGMAFYNSDKFPQWQQ---KLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp CCCEEEEEEECCSSSGGGTT---EEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred CcCcceeEEECCccCcccCC---cEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 346777888621 135 6777777888888888766554332 2112235799999999998666543 3454
Q ss_pred E
Q psy10778 536 V 536 (556)
Q Consensus 536 V 536 (556)
|
T Consensus 347 I 347 (353)
T 2g8s_A 347 L 347 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.32 E-value=0.41 Score=47.52 Aligned_cols=116 Identities=7% Similarity=-0.049 Sum_probs=64.9
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEE--cCCCCEEEEE--eCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATT--APDCHTLWLG--LTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~--s~dg~~l~tg--s~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
++..++.||.|.-.|.++|+..-.+......++....- .+.+..++.+ +.||.+..++...+... ... .+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~---~~~~ 87 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPL---SIRQ 87 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEE---EHHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eee---cccc
Confidence 78888999999999998887766665331122222110 0112233333 56788877775443100 000 0000
Q ss_pred eeCCCccEEE---EEE-----ccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCC
Q psy10778 371 LLGHSACVTD---LYL-----CAGFSVAVSSSEDGTCLLWDINTIGYIREIPC 415 (556)
Q Consensus 371 l~~h~~~V~~---l~~-----s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~ 415 (556)
+. ..+++.. ..+ ...+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 88 lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 00 1122221 000 01356889999999999999999999998875
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.21 E-value=1.4 Score=43.62 Aligned_cols=140 Identities=10% Similarity=-0.067 Sum_probs=65.2
Q ss_pred CcEEEEeCCCCeEEEEeCCCCCCCCe-eEEEEeCCCCeEEEEeecCc-CCCCeEEEEEe--CCcEEEEee---cCC-C-e
Q psy10778 397 GTCLLWDINTIGYIREIPCVDPNTPV-SHVTMSETNGEIASVLQTTK-TGGSILRLHTI--NAQLITSLA---SEL-R-I 467 (556)
Q Consensus 397 g~I~iwdl~~~~~v~~l~~~h~~~~V-~~l~~sp~~~~i~s~s~~~~-~~d~~I~iwdi--~g~~i~~~~---~~~-~-i 467 (556)
..+.++|+.+.+....-..+. .... .+++.. ++..++.|+.... .....+..||+ ....-..+. ... . -
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~-~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPW-YGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSS-CCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCC-CCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 578899998875443322201 1112 233333 4455555542110 01345777876 333222221 111 1 1
Q ss_pred EEEEEeeCCCCCcceEEEEEeCC----------------------CeEEEEeCCCCe--EEEEecCCCCCCeEEEEEecC
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSD----------------------GTIQLWSGYKLA--HLLTLNTNVALPVIAVTYSCD 523 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~d----------------------g~I~iwd~~~~~--~~~~~~~~h~~~V~~l~~s~d 523 (556)
.+++.. ++ .+++.|+.+ ..+.+||..+.+ .+..+... ...-. +...+
T Consensus 246 ~~~~~~---~~---~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~--~~~~~ 316 (357)
T 2uvk_A 246 GFAGIS---ND---SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-RAYGV--SLPWN 316 (357)
T ss_dssp CEEEEE---TT---EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-CBSSE--EEEET
T ss_pred ceEEEE---CC---EEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-cccce--eEEeC
Confidence 223333 45 677777632 247788886543 44444321 12222 23346
Q ss_pred CCEEEEEcCCC------cEEEEEcCCCCCc
Q psy10778 524 SQHLYASNTEG------LVIIWESSSHNRT 547 (556)
Q Consensus 524 g~~l~sgs~Dg------~V~vwdl~~~~~~ 547 (556)
+++++.|+.++ .|.++++++++.+
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 78888888653 3556688776554
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.74 E-value=9.8 Score=41.79 Aligned_cols=191 Identities=11% Similarity=0.079 Sum_probs=110.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEe
Q psy10778 324 GATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 324 ~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd 403 (556)
...|+++.-..+| +|..|+.+| +..||-..- ... .... ......|.++....++. |..|+.+| +..+|
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~----~~~--~~~~--~~~~~~i~~i~~d~~g~-lWigT~~G-l~~yd 88 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYST----QQH--FTYG--ENNNTRIYCGVIIDNTY-LYMGTDNG-ILVYN 88 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCE----EEC--SCTT--STTSSCEEEEEEETTTE-EEEEETTE-EEEEE
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCce----EEE--EccC--CCCCceEEEEEEcCCCc-EEEEeCCC-eEEEe
Confidence 4568999888876 566777777 444552211 000 0000 11235688888777664 55556666 78999
Q ss_pred CCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEee------cCCCeEEEEEeeCCC
Q psy10778 404 INTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSLA------SELRITSVTFSNAPE 477 (556)
Q Consensus 404 l~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~~------~~~~i~~i~~s~~pd 477 (556)
..+.+....... . ...|.++... + +.|..++ .+ -|..+|.....+..+. ....|.++... .+
T Consensus 89 ~~~~~f~~~~~~-~-~~~i~~i~~~-~-g~lWigt-----~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d--~~ 156 (758)
T 3ott_A 89 YRADRYEQPETD-F-PTDVRTMALQ-G-DTLWLGA-----LN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRT--KD 156 (758)
T ss_dssp TTTTEECCCSCC-C-CSCEEEEEEE-T-TEEEEEE-----TT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEEC--TT
T ss_pred CCCCEEECcccC-C-CceEEEEEec-C-CcEEEEc-----CC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEc--CC
Confidence 887654331111 1 2357776543 3 4566665 44 6788888644344331 13467777776 66
Q ss_pred CCcceEEEEEeCCCeEEEEeCCCCeEEEEecCC----CCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 478 GVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTN----VALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 478 g~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~----h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
| . |..|+.+ .|..++..+++........ ....|.++...+++..|..|+. +-|..++..++
T Consensus 157 g---~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 157 N---Q-IYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp C---C-EEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred C---C-EEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 6 4 4445554 5778887666533221111 1234888888887776666664 45888887664
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.60 E-value=3.5 Score=39.63 Aligned_cols=181 Identities=13% Similarity=0.024 Sum_probs=86.5
Q ss_pred CeEEEEeCCCCCCcceEcCC-CCCceEEEEEcCCCCEEEEEeCCC-----cEEEEEeeeccCcccccccCCCeEeeCCCc
Q psy10778 303 NLIRLKMSKELPATPVIRPP-LGATIATATTAPDCHTLWLGLTSG-----NILVYEYELNASTNKIEFCKPPTILLGHSA 376 (556)
Q Consensus 303 g~I~lw~~~~~~~~~~~~~~-h~~~V~~i~~s~dg~~l~tgs~Dg-----~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~ 376 (556)
+.+.++|..+.+....-... ....-.++.+ +++.++.|+.++ .+.+||..+.... .+..+.....
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~ 160 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWH-------LVAPMLTRRI 160 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEE-------ECCCCSSCCB
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEe-------ECCCCCcccc
Confidence 45777887765432221111 1111222222 667777777543 4667776543111 0011111111
Q ss_pred cEEEEEEccCCCEEEEEcCC-----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEE
Q psy10778 377 CVTDLYLCAGFSVAVSSSED-----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLH 451 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~D-----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iw 451 (556)
.-.++.+ ++.+++.|+.+ ..+.++|+.+.+....-..+. ...-.+++.. ++..++.|+.........+.+|
T Consensus 161 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 161 GVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNT-IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEE
T ss_pred ceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCC-ccccceEEEE-CCEEEEEeCCCCCCccceEEEE
Confidence 1122222 56777777654 468899998765433211101 1111222222 4556666653221123678899
Q ss_pred EeCCcEEEEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC-----CeEEEEeCCCCe
Q psy10778 452 TINAQLITSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD-----GTIQLWSGYKLA 502 (556)
Q Consensus 452 di~g~~i~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d-----g~I~iwd~~~~~ 502 (556)
|+....-..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+
T Consensus 237 d~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 237 DVETETWTFVAPMKHRRSALGITVH---QG---RIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE---TT---EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred eCCCCcEEECCCCCCCccceEEEEE---CC---EEEEEcCcCCCcccceEEEEcCCCCE
Confidence 98754433332 11122233333 34 677777744 357788876654
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.64 E-value=3.1 Score=45.54 Aligned_cols=197 Identities=8% Similarity=-0.006 Sum_probs=100.1
Q ss_pred eEEeccCC----CeEEEEeCCCCCCcceE-c------CCCCCceEEEEEcCCCCEEEEEeCCC------cEEEEEeeecc
Q psy10778 295 MICWNECD----NLIRLKMSKELPATPVI-R------PPLGATIATATTAPDCHTLWLGLTSG------NILVYEYELNA 357 (556)
Q Consensus 295 ~l~~gs~D----g~I~lw~~~~~~~~~~~-~------~~h~~~V~~i~~s~dg~~l~tgs~Dg------~I~vwd~~~~~ 357 (556)
+++.|+.+ +.+.++|..+++....- . ......-.++.+..+++.++.|+.++ .+.+||..+..
T Consensus 400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE 479 (695)
T ss_dssp EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE
T ss_pred EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc
Confidence 66677653 46778888776554443 1 01111222333322677888887543 46667765431
Q ss_pred CcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCC--cEEEEeCCCCeEEEEeC---CCCCCCCeeEEEEeCC-C
Q psy10778 358 STNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDG--TCLLWDINTIGYIREIP---CVDPNTPVSHVTMSET-N 431 (556)
Q Consensus 358 ~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg--~I~iwdl~~~~~v~~l~---~~h~~~~V~~l~~sp~-~ 431 (556)
.. .+..+......- +++...++.+++.|+.++ .+.+||..+.+....-. .+.+.....++.+..+ +
T Consensus 480 W~-------~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 480 WS-------MIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp EE-------ECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred EE-------ECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 11 011111111111 222223778888887654 79999999876443221 1000223344566655 4
Q ss_pred CeEEEEeecCc--CCCCeEEEEEeCCcE------EEEee----cCCCeEEEEEeeCCCCCcceEEEEEeC--------CC
Q psy10778 432 GEIASVLQTTK--TGGSILRLHTINAQL------ITSLA----SELRITSVTFSNAPEGVSQNVIVTGHS--------DG 491 (556)
Q Consensus 432 ~~i~s~s~~~~--~~d~~I~iwdi~g~~------i~~~~----~~~~i~~i~~s~~pdg~~~~~l~tg~~--------dg 491 (556)
..++.|+.... ...+.+..||+.... -..+. ....-.+++.. .++ ++++.|+. ..
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~--~~~---~iyv~GG~~~~~~~~~~~ 626 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI--TPR---KLLIVGGTSPSGLFDRTN 626 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE--ETT---EEEEECCBCSSCCCCTTT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe--CCC---EEEEECCccCCCCCCCCC
Confidence 45555553110 123578899987332 22221 11112233333 335 78888874 34
Q ss_pred eEEEEeCCCCeEE
Q psy10778 492 TIQLWSGYKLAHL 504 (556)
Q Consensus 492 ~I~iwd~~~~~~~ 504 (556)
.+.+||..+.+-.
T Consensus 627 ~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 627 SIISLDPLSETLT 639 (695)
T ss_dssp SEEEEETTTTEEE
T ss_pred eEEEEECCCCeEE
Confidence 5899998877654
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.50 E-value=8.1 Score=37.37 Aligned_cols=204 Identities=10% Similarity=0.036 Sum_probs=113.4
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEe--CCCcEEEEEeeeccCcccccccCCCeEeeCCCccEE
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGL--TSGNILVYEYELNASTNKIEFCKPPTILLGHSACVT 379 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs--~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~ 379 (556)
+..|+..++...+...+.. .. +.+++++++.|+-.. .++.-.||.+.... .....+..+..
T Consensus 87 ~~~Iy~i~~dg~~~~~l~~----~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG--------s~~~~lt~~~~--- 149 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTVLDP----DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG--------EEKKKIKNHYL--- 149 (302)
T ss_dssp SEEEEEEETTSCCCEEEEC----SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS--------CCCEEEESSCC---
T ss_pred CCeEEEEeCCCCcceEeec----CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC--------CCeEEEeCCCc---
Confidence 4577888887665433322 11 235677888888776 56677777776542 12244444433
Q ss_pred EEEEccCCCEEEEEcC-CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEE
Q psy10778 380 DLYLCAGFSVAVSSSE-DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLI 458 (556)
Q Consensus 380 ~l~~s~~~~~l~sgs~-Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i 458 (556)
.+++++++.|.-.+. ...|.+-++..+...+.+.. . .. ..++|+++.|+-.... ....|..-+++|...
T Consensus 150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~--~~-~~~~P~g~~iy~t~~~---~~~~I~~~~ldG~~~ 219 (302)
T 3s25_A 150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---N--CY-KPVVLDDTNVYYMDVN---RDNAIVHVNINNPNP 219 (302)
T ss_dssp -CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---C--EE-EEEEEETTEEEEEEGG---GTTEEEEECSSSCCC
T ss_pred -eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---C--cc-ceeeecCCEEEEEEcC---CCcEEEEEECCCCCe
Confidence 345777887775554 67888888876554433333 1 22 3466999999877621 124677777776544
Q ss_pred EEeecCCCeEEEEEeeCCCCCcceEEEEEe--CCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc-CCCc
Q psy10778 459 TSLASELRITSVTFSNAPEGVSQNVIVTGH--SDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN-TEGL 535 (556)
Q Consensus 459 ~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~--~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs-~Dg~ 535 (556)
..+. ...+.. ++ |++ ..|.-++ ..+.|..-++. |...+.+..+ .+.. +++.+.+|+-.. ..+.
T Consensus 220 ~~Lt-~~~~~~--~~--~~g---~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~ 285 (302)
T 3s25_A 220 VVLT-EANIEH--YN--VYG---SLIFYQRGGDNPALCVVKND-GTGFKELAKG---EFCN--INVTSQYVYFTDFVSNK 285 (302)
T ss_dssp EECS-CSCEEE--EE--EET---TEEEEEECSSSCEEEEEETT-SCCCEEEEES---CEEE--EEECSSEEEEEETTTCC
T ss_pred EEEe-CCCcce--EE--ECC---CEEEEEECCCCcEEEEEECC-CCccEEeeCC---ccce--EEEeCCEEEEEECCCCe
Confidence 4442 233433 55 556 4555442 34567776763 4333344312 2443 444566666444 4566
Q ss_pred EEEEEcCCCCC
Q psy10778 536 VIIWESSSHNR 546 (556)
Q Consensus 536 V~vwdl~~~~~ 546 (556)
|..-++.....
T Consensus 286 i~~~~~dGs~~ 296 (302)
T 3s25_A 286 EYCTSTQNPDT 296 (302)
T ss_dssp EEEEESSSCCS
T ss_pred EEEEECCCCCc
Confidence 66555444333
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.07 E-value=3.1 Score=48.76 Aligned_cols=232 Identities=10% Similarity=0.070 Sum_probs=139.1
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCC
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGH 374 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h 374 (556)
++|--. ..++.++++++........ -...|.-=.|..+ +.|+..+ +..|..|++.... .|++.+.-|
T Consensus 79 iiALra-g~~lQiFnl~~k~klks~~--~~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s--------~P~k~fdR~ 145 (1630)
T 1xi4_A 79 VIALKA-GKTLQIFNIEMKSKMKAHT--MTDDVTFWKWISL-NTVALVT-DNAVYHWSMEGES--------QPVKMFDRH 145 (1630)
T ss_pred eEEEec-CCeEEEeehHHhhhhcccc--cCCCceEEEecCC-CeeEEEc-CCeEEEeccCCCC--------ccHHHHhcc
Confidence 555443 6899999998765555443 2345666677655 4555444 4689999996531 222333333
Q ss_pred ----CccEEEEEEccCCCEEEEEc-------CCCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEe--CC-CCeEEEEeec
Q psy10778 375 ----SACVTDLYLCAGFSVAVSSS-------EDGTCLLWDINTIGYIREIPCVDPNTPVSHVTMS--ET-NGEIASVLQT 440 (556)
Q Consensus 375 ----~~~V~~l~~s~~~~~l~sgs-------~Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~s--p~-~~~i~s~s~~ 440 (556)
...|..-..+++.++++..+ -.|.+.+|+..+ +..+.+.+ | .+....+... +. ...++.+...
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~ieg-h-a~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEG-H-AASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhH-h-HhhhheeccCCCCCCceEEEEEEec
Confidence 35677778888888766432 358888998875 34455555 5 3333333332 11 1233333211
Q ss_pred CcCCCCeEEEEEeCCc----EEE---E---e-e---cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEE
Q psy10778 441 TKTGGSILRLHTINAQ----LIT---S---L-A---SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLT 506 (556)
Q Consensus 441 ~~~~d~~I~iwdi~g~----~i~---~---~-~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~ 506 (556)
. .++.+++.++... ... . . . ..+...++..+ +.. .++..-+.-|.|+++|+.++.++..
T Consensus 223 ~--~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs--~k~---g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 223 Q--AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS--EKH---DVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred C--CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEec--ccc---CEEEEEecCceEEEEecccchhhhh
Confidence 1 3478888887321 110 0 0 0 13445567777 443 4777888889999999999998776
Q ss_pred ecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCee
Q psy10778 507 LNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPKF 550 (556)
Q Consensus 507 ~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~~ 550 (556)
-. -...+|-..+-+....-+++....|.|.--.+.....+|-+
T Consensus 296 ~r-is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~yi 338 (1630)
T 1xi4_A 296 NR-ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYI 338 (1630)
T ss_pred cc-ccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhhhhH
Confidence 55 23455655555544445666678888888888877666654
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.96 E-value=14 Score=38.93 Aligned_cols=217 Identities=12% Similarity=0.063 Sum_probs=127.9
Q ss_pred ceEEeccCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEc--CCCCEEEEEeCC-------CcE---------EEEEeee
Q psy10778 294 GMICWNECDNLIRLKMSKELPATPVIRPPLGATIATATTA--PDCHTLWLGLTS-------GNI---------LVYEYEL 355 (556)
Q Consensus 294 ~~l~~gs~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s--~dg~~l~tgs~D-------g~I---------~vwd~~~ 355 (556)
.+++-.-....|-..+++.-+...++.......+..+++- |+..+++++++. |.. .+|..-.
T Consensus 144 ylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD 223 (638)
T 3sbq_A 144 YLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAID 223 (638)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEE
T ss_pred EEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEc
Confidence 3455555666777777777777777777788889999987 688888888743 221 1111111
Q ss_pred ccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC--------------------------------------C
Q psy10778 356 NASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED--------------------------------------G 397 (556)
Q Consensus 356 ~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D--------------------------------------g 397 (556)
. .+ ++....+. -.+..-.+...+++++.++.+.+ +
T Consensus 224 ~-~t-----m~v~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 224 A-ET-----MEMAFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp T-TT-----CSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred C-Cc-----cEEEEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 0 00 00000000 01122233445566666654422 1
Q ss_pred --cEEEEeCCC----C-eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC-------Cc-------
Q psy10778 398 --TCLLWDINT----I-GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN-------AQ------- 456 (556)
Q Consensus 398 --~I~iwdl~~----~-~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~-------g~------- 456 (556)
.+.+-|.+. + ..++-+.. ......+.++|||+++++++. .+.++.++|++ ++
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~---pksPHGv~vsPDGkyi~v~GK----LsptvtV~d~~k~~~~~~~k~~~~~~~ 369 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPV---PKNPHGCNTSSDGKYFIAAGK----LSPTCSMIAIDKLPDLFAGKLADPRDV 369 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEE---SSSCCCEEECTTSCEEEEECT----TSSBEEEEEGGGHHHHHTTCCSCGGGG
T ss_pred CCCeeEEccccccccCCceEEEEeC---CCCCcceeeCCCCCEEEEcCC----CCCeEEEEEeehhhhhhhccccCcccc
Confidence 244444443 1 22333333 344567889999999999875 67899999985 22
Q ss_pred EEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC----------eEEEEecCCCCCCeEEEEE------
Q psy10778 457 LITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL----------AHLLTLNTNVALPVIAVTY------ 520 (556)
Q Consensus 457 ~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~----------~~~~~~~~~h~~~V~~l~~------ 520 (556)
.+......-.....+|. ++| +...+-.-|..|.-|++... ..+..+. -|-. +-.+.-
T Consensus 370 ~~ae~e~GlGPlHt~Fd--~~G---~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~d-v~Yq-pGH~~~~~get~ 442 (638)
T 3sbq_A 370 IVGEPELGLGPLHTTFD--GRG---NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLD-VHYQ-PGHLHASLCETN 442 (638)
T ss_dssp EEECCBCCSCEEEEEEC--SSS---EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEE-CSSC-EEEEEETTTTST
T ss_pred eEeeccCCCcccEEEEC--CCC---ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccc-cccC-CcccccCCCccC
Confidence 24455556677889999 888 77777779999999998543 3555555 3322 222222
Q ss_pred ecCCCEEEEEc
Q psy10778 521 SCDSQHLYASN 531 (556)
Q Consensus 521 s~dg~~l~sgs 531 (556)
.+||++|++..
T Consensus 443 ~~dGk~lv~ln 453 (638)
T 3sbq_A 443 EADGKWLVALS 453 (638)
T ss_dssp TCCSCEEEEEE
T ss_pred CCCccEEEEec
Confidence 46777777764
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.60 E-value=12 Score=38.53 Aligned_cols=113 Identities=14% Similarity=0.128 Sum_probs=64.7
Q ss_pred eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeE--EEEeCCC----CCCCCeeEEEEeCC---CCeEEEEeecC
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGY--IREIPCV----DPNTPVSHVTMSET---NGEIASVLQTT 441 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~--v~~l~~~----h~~~~V~~l~~sp~---~~~i~s~s~~~ 441 (556)
+...-...+.|+|.|+|+++++-...+.|++++..+++. +..+... ........|+++|+ ++.|.++....
T Consensus 22 ~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 22 ILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred EECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence 333345667999999999888765555788888655543 2233210 00356779999996 56665554210
Q ss_pred -c---CC----CCeEEEEEeCC---cE-----EE-Eee--cCCCeEEEEEeeCCCCCcceEEEEEe
Q psy10778 442 -K---TG----GSILRLHTINA---QL-----IT-SLA--SELRITSVTFSNAPEGVSQNVIVTGH 488 (556)
Q Consensus 442 -~---~~----d~~I~iwdi~g---~~-----i~-~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~ 488 (556)
. +. ...|.-++.+. .+ +. .+. .......|+|. ++| .+.++.+
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~--pDG---~Lyv~~G 162 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIG--PDQ---KIYYTIG 162 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEEC--TTS---CEEEEEC
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeEC--CCC---eEEEEEC
Confidence 0 00 23566666531 11 11 121 12457899999 899 6666543
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.99 E-value=13 Score=36.71 Aligned_cols=151 Identities=11% Similarity=0.055 Sum_probs=85.5
Q ss_pred eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeE--EEEeCCC--CCCCCeeEEEEeCC---CCeEEEEeecCcC
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGY--IREIPCV--DPNTPVSHVTMSET---NGEIASVLQTTKT 443 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~--v~~l~~~--h~~~~V~~l~~sp~---~~~i~s~s~~~~~ 443 (556)
+...-..-+.|+|.|+|+++++--..|.|++++...++. +..+... ........|+++|+ ++.|.+.-...
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-- 104 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-- 104 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS--
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC--
Confidence 334445678999999999888876689999998765543 2222110 11456889999996 45554432110
Q ss_pred CCCeEEEEEeCC-----------cE-EEEee--cCCCeEEEEEeeCCCCCcceEEEEEeC-------------CCeEEEE
Q psy10778 444 GGSILRLHTINA-----------QL-ITSLA--SELRITSVTFSNAPEGVSQNVIVTGHS-------------DGTIQLW 496 (556)
Q Consensus 444 ~d~~I~iwdi~g-----------~~-i~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~-------------dg~I~iw 496 (556)
.++.|.-|...+ +. +..+. .......|+|. |+| .+.++.+. .|.|.-.
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg--pDG---~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG--PDK---MLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC--TTS---CEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC--CCC---CEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 345566665543 11 11221 12345678999 888 66665432 2444444
Q ss_pred eCCCCe--------EEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10778 497 SGYKLA--------HLLTLNTNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 497 d~~~~~--------~~~~~~~~h~~~V~~l~~s~dg~~l~sg 530 (556)
+.. ++ ....+..+|.. ...++|+|+|.+.++-
T Consensus 180 ~~d-G~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 180 TPD-GEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp CTT-SSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEE
T ss_pred eCC-CCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEe
Confidence 542 22 01122224533 4688999988766543
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.81 E-value=8.6 Score=35.46 Aligned_cols=143 Identities=10% Similarity=-0.065 Sum_probs=81.2
Q ss_pred ccEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeE------EEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEE
Q psy10778 376 ACVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGY------IREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILR 449 (556)
Q Consensus 376 ~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~------v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~ 449 (556)
..+.+++|+|+|.+.+. .+|.+.-.+..+... -..+-. ..-..-.++.+.++|.+.++ + ++.|+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~-~Gw~~F~a~~fD~~G~LYav-~------dG~iy 110 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN-GGWNQFQFLFFDPNGYLYAV-S------KDKLY 110 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC-SCGGGCSEEEECTTSCEEEE-E------TTEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecc-cccccceEEEECCCCCEEEe-C------CCEEE
Confidence 46779999998886555 677776666544111 122211 00122478999999887777 5 48887
Q ss_pred EEEe--CCcE--E---EEee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCe------EEEEecCCCCCC
Q psy10778 450 LHTI--NAQL--I---TSLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLA------HLLTLNTNVALP 514 (556)
Q Consensus 450 iwdi--~g~~--i---~~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~------~~~~~~~~h~~~ 514 (556)
-++- ++.- + ..+. .=..+..+.+. |+| .+.++. ||.++-+...+.. ....+....-..
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~--p~G---~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~ 183 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFH--PNG---YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDT 183 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEEC--TTS---CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGG
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEEC--CCc---eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcce
Confidence 7765 2211 0 1111 11467899999 999 555554 7876544433211 111221112233
Q ss_pred eEEEEEecCCCEEEEEcCCCcEE
Q psy10778 515 VIAVTYSCDSQHLYASNTEGLVI 537 (556)
Q Consensus 515 V~~l~~s~dg~~l~sgs~Dg~V~ 537 (556)
-+-+.|++++.+.++. +|.++
T Consensus 184 yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 184 FKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEEEEECTTSCEEEEE--TTEEE
T ss_pred EEEEEECCCCcEEEEe--CCeEE
Confidence 4557799998777665 77443
No 338
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.63 E-value=13 Score=35.95 Aligned_cols=205 Identities=6% Similarity=-0.064 Sum_probs=109.6
Q ss_pred cCCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCC------------cEEEEEeeeccCcccccccCC
Q psy10778 300 ECDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSG------------NILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 300 s~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg------------~I~vwd~~~~~~~~~~~~~~~ 367 (556)
..++.|...+.+......+.. + .+--++++|++|+-+.... .-.|+.+..... .
T Consensus 34 ~d~~~ly~~~~dg~~~~~l~~----~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~--------~ 99 (302)
T 3s25_A 34 NDNGRLYAMNIDGSNIHKLSN----D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH--------G 99 (302)
T ss_dssp GGTTEEEEEETTSCSCEEEEE----E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC--------C
T ss_pred CCCceEEEEcCCCCCCEEccC----C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC--------c
Confidence 345666666665443333221 1 2334567888888775432 234444443211 1
Q ss_pred CeEeeCCCccEEEEEEccCCCEEEEEc--CC--CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcC
Q psy10778 368 PTILLGHSACVTDLYLCAGFSVAVSSS--ED--GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKT 443 (556)
Q Consensus 368 ~~~l~~h~~~V~~l~~s~~~~~l~sgs--~D--g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~ 443 (556)
...+.... +..++++++.|+-.. .+ ..|..-++. +.....+.. + .. .+++++++.|...+.
T Consensus 100 ~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~-~-~~----~~~~~~g~~iy~t~~---- 164 (302)
T 3s25_A 100 STVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKN-H-YL----FTCNTSDRYFYYNNP---- 164 (302)
T ss_dssp CEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEES-S-CC----CCSEEETTEEEEECT----
T ss_pred ceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeC-C-Cc----eEeeEECCEEEEEeC----
Confidence 12232222 235677888777655 33 445555665 333444544 3 22 456788999987762
Q ss_pred CCCeEEEEEeCCcEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCC--CeEEEEeCCCCeEEEEecCCCCCCeEEEEEe
Q psy10778 444 GGSILRLHTINAQLITSLASELRITSVTFSNAPEGVSQNVIVTGHSD--GTIQLWSGYKLAHLLTLNTNVALPVIAVTYS 521 (556)
Q Consensus 444 ~d~~I~iwdi~g~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~d--g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s 521 (556)
....|...+++|.....+. .+... ..+. |++ ..|+-...+ ..|..-++.... ...+. ...+ ..++
T Consensus 165 g~~~Iy~~~l~g~~~~~l~-~~~~~-~~~~--P~g---~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt---~~~~--~~~~ 231 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFY-DCNCY-KPVV--LDD---TNVYYMDVNRDNAIVHVNINNPN-PVVLT---EANI--EHYN 231 (302)
T ss_dssp TTCCEEEEETTTTEEEEEE-CSCEE-EEEE--EET---TEEEEEEGGGTTEEEEECSSSCC-CEECS---CSCE--EEEE
T ss_pred CCceEEEEECCCCCEEEEe-CCCcc-ceee--ecC---CEEEEEEcCCCcEEEEEECCCCC-eEEEe---CCCc--ceEE
Confidence 3678888888865544442 22222 3455 666 566554433 366666664433 44443 2333 3478
Q ss_pred cCCCEEEEEcC--CCcEEEEEcCCCCC
Q psy10778 522 CDSQHLYASNT--EGLVIIWESSSHNR 546 (556)
Q Consensus 522 ~dg~~l~sgs~--Dg~V~vwdl~~~~~ 546 (556)
|++..|+-++. .+.|..-++....+
T Consensus 232 ~~g~~Iy~~~~~~~~~i~~~~~DG~~r 258 (302)
T 3s25_A 232 VYGSLIFYQRGGDNPALCVVKNDGTGF 258 (302)
T ss_dssp EETTEEEEEECSSSCEEEEEETTSCCC
T ss_pred ECCCEEEEEECCCCcEEEEEECCCCcc
Confidence 88888876532 35666666655443
No 339
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.48 E-value=14 Score=36.33 Aligned_cols=209 Identities=11% Similarity=0.044 Sum_probs=107.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccC----CCEEEEEcC------
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAG----FSVAVSSSE------ 395 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~----~~~l~sgs~------ 395 (556)
....++|.|+|+.|+++...|.|++++.... ...... ...............|+++|+ +.+.++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~--~~~~~~-~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKG--LSAPLS-GVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTE--ECCCCB-SCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCc--eeeEec-CCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4678999999983445556798888873211 000000 000112223456789999995 444444322
Q ss_pred -CCcEEEEeCCCC----eEEEE-eCC-CC---CCCCeeEEEEeCCCCeEEEEeecC--------cCCCCeEEEEEeCCcE
Q psy10778 396 -DGTCLLWDINTI----GYIRE-IPC-VD---PNTPVSHVTMSETNGEIASVLQTT--------KTGGSILRLHTINAQL 457 (556)
Q Consensus 396 -Dg~I~iwdl~~~----~~v~~-l~~-~h---~~~~V~~l~~sp~~~~i~s~s~~~--------~~~d~~I~iwdi~g~~ 457 (556)
...|..+++... ...+. +.. +. .......|+|.|+|.+.++.+... ....+.|.-++.+|..
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666432 11111 111 00 012346799999986666654211 0123567777766541
Q ss_pred -------------EEEee-cCCCeEEEEEeeCC-CCCcceEEEEEeC-CCeEEEEeCCCC--------------------
Q psy10778 458 -------------ITSLA-SELRITSVTFSNAP-EGVSQNVIVTGHS-DGTIQLWSGYKL-------------------- 501 (556)
Q Consensus 458 -------------i~~~~-~~~~i~~i~~s~~p-dg~~~~~l~tg~~-dg~I~iwd~~~~-------------------- 501 (556)
...+. .......++|. + +| ++.++-.. ++.=.|.-+..+
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d--~~~g---~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMN--PWSN---ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEE--TTTT---EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEE--CCCC---CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 11111 23457889999 7 56 55554332 111122211111
Q ss_pred -----------eEEEEecCCCCCCeEEEEEec-------CCCEEEEEcCCCcEEEEEcCCC
Q psy10778 502 -----------AHLLTLNTNVALPVIAVTYSC-------DSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 502 -----------~~~~~~~~~h~~~V~~l~~s~-------dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.++..+. +...+..++|.. +|.++++.-..+.|...++..+
T Consensus 251 ~~~~~~~~~~~~P~~~~~--~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 251 EAKGEIVAGTEQPVFYWK--DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp TCCBSSCTTSCCCSEEES--SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred cccCCCCCCccCCeEEeC--CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 1112222 234677888864 5777777777888888887653
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.39 E-value=6.8 Score=46.05 Aligned_cols=227 Identities=7% Similarity=0.053 Sum_probs=123.4
Q ss_pred CCCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEE
Q psy10778 301 CDNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTD 380 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~ 380 (556)
...+|.+.|+.++.........-. +.-.+|..+.+|.-. ..++.|+++++. ..++...- ..+|.-
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~Ad----sAIMnP~~~iiALra-g~~lQiFnl~~k---------~klks~~~-~e~Vvf 110 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMK---------SKMKAHTM-TDDVTF 110 (1630)
T ss_pred CCceEEEEECCCCCCcccccccch----hhccCCCcceEEEec-CCeEEEeehHHh---------hhhccccc-CCCceE
Confidence 344788888876543322111122 233567777776655 689999999876 22222222 234555
Q ss_pred EEEccCCCEEEEEcCCCcEEEEeCCCC-eEEEEeCCCCC---CCCeeEEEEeCCCCeEEEEeecC--cCCCCeEEEEEeC
Q psy10778 381 LYLCAGFSVAVSSSEDGTCLLWDINTI-GYIREIPCVDP---NTPVSHVTMSETNGEIASVLQTT--KTGGSILRLHTIN 454 (556)
Q Consensus 381 l~~s~~~~~l~sgs~Dg~I~iwdl~~~-~~v~~l~~~h~---~~~V~~l~~sp~~~~i~s~s~~~--~~~d~~I~iwdi~ 454 (556)
=.|-.+..+-+. + +..|.-|++... .+++.+.. |. ...|..-..+++.++++..+-.. +.-.|.+.+|+..
T Consensus 111 WkWis~~~l~lV-T-~~aVyHW~~~~~s~P~k~fdR-~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e 187 (1630)
T 1xi4_A 111 WKWISLNTVALV-T-DNAVYHWSMEGESQPVKMFDR-HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (1630)
T ss_pred EEecCCCeeEEE-c-CCeEEEeccCCCCccHHHHhc-chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc
Confidence 556544443222 2 467999999632 33333332 20 35677778888999887665322 1245788888886
Q ss_pred CcEEEEee-cCCCeEEEEEeeCCCCCcceEEEEEe---CCCeEEEEeCCCC---eE------EEE-ecC-CCCCCeEEEE
Q psy10778 455 AQLITSLA-SELRITSVTFSNAPEGVSQNVIVTGH---SDGTIQLWSGYKL---AH------LLT-LNT-NVALPVIAVT 519 (556)
Q Consensus 455 g~~i~~~~-~~~~i~~i~~s~~pdg~~~~~l~tg~---~dg~I~iwd~~~~---~~------~~~-~~~-~h~~~V~~l~ 519 (556)
.+.-+.+. |......+.....+.. ..+++.+. ..++++|.++... .. +.. +.. ....-..++.
T Consensus 188 r~~sQ~iegha~~F~~~~~~~~~~~--~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~ 265 (1630)
T 1xi4_A 188 RKVSQPIEGHAASFAQFKMEGNAEE--STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (1630)
T ss_pred cccchhhhHhHhhhheeccCCCCCC--ceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEE
Confidence 44333332 1111111111100111 02222222 1368888887432 11 111 110 1123345788
Q ss_pred EecCCCEEEEEcCCCcEEEEEcCCCCCc
Q psy10778 520 YSCDSQHLYASNTEGLVIIWESSSHNRT 547 (556)
Q Consensus 520 ~s~dg~~l~sgs~Dg~V~vwdl~~~~~~ 547 (556)
.|+....++..+.-|-|+++|+.++..+
T Consensus 266 vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred eccccCEEEEEecCceEEEEecccchhh
Confidence 8888889999999999999999996653
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.01 E-value=5.4 Score=38.45 Aligned_cols=113 Identities=8% Similarity=0.007 Sum_probs=57.1
Q ss_pred cCCCEEEEEcC------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEE
Q psy10778 385 AGFSVAVSSSE------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLI 458 (556)
Q Consensus 385 ~~~~~l~sgs~------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i 458 (556)
.++++++.|+. -..+.++|+.+.+....-..+. ...-.+++.. ++..++.|+.........+.+||+....-
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT-PRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS-CCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC-CcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 35677777764 2458999999876443322201 1111222332 45666666532211124577888864322
Q ss_pred EEee---cCCCeEEEEEeeCCCCCcceEEEEEeCC--------------CeEEEEeCCCCeEEE
Q psy10778 459 TSLA---SELRITSVTFSNAPEGVSQNVIVTGHSD--------------GTIQLWSGYKLAHLL 505 (556)
Q Consensus 459 ~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~d--------------g~I~iwd~~~~~~~~ 505 (556)
..+. ....-.+++.. ++ ++++.|+.+ ..+.+||..+.+-..
T Consensus 235 ~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 235 EVMTEFPQERSSISLVSL---AG---SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EECCCCSSCCBSCEEEEE---TT---EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EECCCCCCcccceEEEEE---CC---EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 2221 11112233333 34 677777653 357778877655433
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.65 E-value=3.5 Score=39.78 Aligned_cols=112 Identities=13% Similarity=0.014 Sum_probs=57.0
Q ss_pred cCCCEEEEEcC-C-----CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEE
Q psy10778 385 AGFSVAVSSSE-D-----GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLI 458 (556)
Q Consensus 385 ~~~~~l~sgs~-D-----g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i 458 (556)
.++++++.|+. + ..+.++|+.+.+....-..+. ...-.+++.. ++..++.|+.........+.+||+....-
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT-ARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC-chhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 35667777765 2 468999998865433221101 1111122222 55666776632211123678888874433
Q ss_pred EEee---cCCCeEEEEEeeCCCCCcceEEEEEeCCC--------------eEEEEeCCCCeEE
Q psy10778 459 TSLA---SELRITSVTFSNAPEGVSQNVIVTGHSDG--------------TIQLWSGYKLAHL 504 (556)
Q Consensus 459 ~~~~---~~~~i~~i~~s~~pdg~~~~~l~tg~~dg--------------~I~iwd~~~~~~~ 504 (556)
..+. ....-.+++.. ++ ++++.|+.++ .+.+||..+.+-.
T Consensus 225 ~~~~~~p~~r~~~~~~~~---~~---~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 225 APFEAFPQERSSLSLVSL---VG---TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp EEECCCSSCCBSCEEEEE---TT---EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred EECCCCCCcccceeEEEE---CC---EEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 3332 12222233333 34 6777777532 3667887665543
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.62 E-value=2.5 Score=40.54 Aligned_cols=207 Identities=14% Similarity=0.088 Sum_probs=106.0
Q ss_pred CCeEEEEeCCCCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEE
Q psy10778 302 DNLIRLKMSKELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDL 381 (556)
Q Consensus 302 Dg~I~lw~~~~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l 381 (556)
||.|..|-....-.+.. .......|..++...+ ..++. . ||.|..|-.....+.+.+. . -...|..+
T Consensus 41 ~G~v~~wG~n~~Gqlg~-p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P~-----~----~~~~v~~i 107 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTM-PAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVPA-----E----ARSGVDAI 107 (282)
T ss_dssp TTEEEEEECCSSSTTSC-CGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCCG-----G----GSSSEEEE
T ss_pred CCEEEEEeCCCCCCCCC-CccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCCc-----c----cCCCeEEE
Confidence 77777776543211111 0011235777776544 33444 4 8999999766442222111 1 12467777
Q ss_pred EEccCCCEEEEEcCCCcEEEEeCCCC-eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--CcEE
Q psy10778 382 YLCAGFSVAVSSSEDGTCLLWDINTI-GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--AQLI 458 (556)
Q Consensus 382 ~~s~~~~~l~sgs~Dg~I~iwdl~~~-~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g~~i 458 (556)
+.......++ . ||.|..|-.... +.-..... ...|..++.-.. +.+.. .++.|+.|-.+ +++-
T Consensus 108 a~G~~hs~al--~-~G~v~~wG~n~~gqlg~~~~~---~~~i~~i~~G~~--~~~~l------~~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 108 AAGAWASYAL--K-DGKVIAWGDDSDGQTTVPAEA---QSGVTALDGGVY--TALAV------KNGGVIAWGDNYFGQTT 173 (282)
T ss_dssp EEETTEEEEE--E-TTEEEEEECCTTSTTSCCGGG---GSSEEEEEECSS--EEEEE------ETTEEEEEECCTTSTTS
T ss_pred ECcCCEEEEE--e-CCeEEEecCCCCCcCCCCccC---CCCeEEEEcccC--EEEEE------ECCEEEEecCCCCCCCC
Confidence 7665433333 4 899999976542 21111111 345666555432 22222 35778877664 3321
Q ss_pred EEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEE
Q psy10778 459 TSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVII 538 (556)
Q Consensus 459 ~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~v 538 (556)
........|..++.. .. ..++. .||.|+.|-......+..-. .....|..++-..+...+ -+ ||.|+.
T Consensus 174 ~p~~~~~~v~~i~~G--~~----hs~al--~~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G~~h~~a--l~-~g~v~~ 241 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGG--IF----HSLAL--KDGKVIAWGDNRYKQTTVPT-EALSGVSAIASGEWYSLA--LK-NGKVIA 241 (282)
T ss_dssp CCGGGGSSEEEEEEC--SS----EEEEE--ETTEEEEEECCTTSTTCCCG-GGGSSCCEEEECSSCEEE--EE-TTEEEE
T ss_pred CceecCCCeEEEEec--CC----EEEEE--ECCeEEEEECCCCCCCCCCc-ccCCCceEEEcCCCEEEE--EE-CCEEEE
Confidence 111223567777765 32 44555 59999999754322111101 112457777665443333 33 999999
Q ss_pred EEcCCCCCc
Q psy10778 539 WESSSHNRT 547 (556)
Q Consensus 539 wdl~~~~~~ 547 (556)
|=.......
T Consensus 242 wG~n~~gq~ 250 (282)
T 3qhy_B 242 WGSSRTAPS 250 (282)
T ss_dssp ESTTCCCCG
T ss_pred ecCCCCccc
Confidence 977664433
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.88 E-value=1.6 Score=43.26 Aligned_cols=110 Identities=10% Similarity=0.045 Sum_probs=70.9
Q ss_pred CEEEEEcCCCcEEEEeCCCCeEEEEeCCCCCC--CCeeEEEE--eCCCCeEEEE--eecCcCCCCeEEEEEeC-CcEEEE
Q psy10778 388 SVAVSSSEDGTCLLWDINTIGYIREIPCVDPN--TPVSHVTM--SETNGEIASV--LQTTKTGGSILRLHTIN-AQLITS 460 (556)
Q Consensus 388 ~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~h~~--~~V~~l~~--sp~~~~i~s~--s~~~~~~d~~I~iwdi~-g~~i~~ 460 (556)
.+++.++.||.|.-.|..+|+...+++. . .++....- .+.++.++.+ . .+|.|..++.. |.....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~---~~~~p~~~~~~~~~~~~~~~~vv~p~-----~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEP---ENFQPLIEIQEPSRLETYETLIIEPF-----GDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECG---GGSCCSEECCCSCTTTSSEEEEECCS-----TTTEEEEEETTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC---CccCCcEEecCCccccCCcEEEEEEC-----CCCEEEEEECCCCcEEee
Confidence 4788899999999999999999888875 3 22222110 0112233333 3 68999999876 544433
Q ss_pred eec-----CCCeEEEEEeeCC-------CCCcceEEEEEeCCCeEEEEeCCCCeEEEEecC
Q psy10778 461 LAS-----ELRITSVTFSNAP-------EGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLNT 509 (556)
Q Consensus 461 ~~~-----~~~i~~i~~s~~p-------dg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~~ 509 (556)
... .+++.. .-.|.- .+ ..+++|+.+|.+...|+.+|+.+..+..
T Consensus 83 ~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~---g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 83 LSIRQLVSTSPLHL-KTNIVVNDSGKIVED---EKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEHHHHHTTCSEEE-ECC----------CC---EEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccceecccccc-CCCceeecccccccC---CEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 321 122221 100001 33 6889999999999999999999999974
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.72 E-value=8.8 Score=39.51 Aligned_cols=111 Identities=12% Similarity=0.092 Sum_probs=59.8
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEee--CCCccEEEEEEccC---CCEE-EEEcC---
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILL--GHSACVTDLYLCAG---FSVA-VSSSE--- 395 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~s~~---~~~l-~sgs~--- 395 (556)
...+.++|.|+|+++++-...+.|++++...+. ..... .....+. .....+..|+++|+ +..| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~--~~~~~-~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS--VKTVF-QVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC--EEEEE-ECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc--EeEEe-cCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 346799999999877765443467776543221 00000 0000111 13466789999995 4444 44332
Q ss_pred ---------CCcEEEEeCCCC-------eEE-EEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 396 ---------DGTCLLWDINTI-------GYI-REIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 396 ---------Dg~I~iwdl~~~-------~~v-~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
...|.-+++... +.+ ..+.... ......|+|.|+|.+.++.+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~-~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSK-DHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCS-SCCEEEEEECTTSCEEEEECC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCC-CCCCCeEeECCCCeEEEEECC
Confidence 234555654321 112 2233201 345789999999987777653
No 346
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.69 E-value=22 Score=33.75 Aligned_cols=197 Identities=8% Similarity=0.011 Sum_probs=115.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEcc-CCCEEEEEcCCCcEEEEe
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCA-GFSVAVSSSEDGTCLLWD 403 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~I~iwd 403 (556)
+.+..+........|+.-+.+|.++--....-+.... .-+ +. ....|..+.... +...++..+.+|.++...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~----~~l--l~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~ 96 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSK----VSL--KS-REEKIVGAFIREKFGNRLLLATKKGYVKKIP 96 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEE----CCC--SS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcc----ccc--CC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEE
Confidence 4555554444455666667778776433221110000 111 22 345566664422 467899999999999988
Q ss_pred CCCCe------EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC----------CcEEEEeecCCCe
Q psy10778 404 INTIG------YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN----------AQLITSLASELRI 467 (556)
Q Consensus 404 l~~~~------~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~----------g~~i~~~~~~~~i 467 (556)
+.... ....++. ...+..+........++..+ ..|.+..+... |.....+...+.|
T Consensus 97 l~~~~~~~~G~~~i~lke---gD~l~~~~~~~~~~~ill~T-----~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~v 168 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTE---GDEVVSIASSVDETHILLFT-----KKGRVARFSVREVPPSTPGARGVQGIKLEKNDET 168 (276)
T ss_dssp GGGTTTCSTTEECSCCCT---TCCEEEEEECCSSCEEEEEE-----TTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCE
T ss_pred HHHhhhhcCCeEEEecCC---CCEEEEEEEeCCCCEEEEEE-----CCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEE
Confidence 65431 1222333 45666666665666777777 78888887652 2222223345667
Q ss_pred EEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-------CCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEE--
Q psy10778 468 TSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-------KLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVII-- 538 (556)
Q Consensus 468 ~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-------~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~v-- 538 (556)
.++... +++ ..++..+..|.++...+. .++-+..+. ....+..+....+...++..+.+|.+..
T Consensus 169 v~~~~~--~~~---~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~--~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~ 241 (276)
T 3no0_A 169 SGLRIW--NGE---PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG--TKDTLVDLIPIKEEVELLITTKNGKAFYDK 241 (276)
T ss_dssp EEEEEE--SSC---SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC--SSSCEEEEEEESSEEEEEEEETTSCEEEEE
T ss_pred EEEEEe--CCC---CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc--CCCcEEEEEEeCCCCEEEEEcCCCeEEEee
Confidence 776655 444 578888999998888752 233334443 2345666555444456777888898888
Q ss_pred EEcCC
Q psy10778 539 WESSS 543 (556)
Q Consensus 539 wdl~~ 543 (556)
++..+
T Consensus 242 ~~~~~ 246 (276)
T 3no0_A 242 INQKD 246 (276)
T ss_dssp EEGGG
T ss_pred eCHHH
Confidence 87655
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.41 E-value=32 Score=37.39 Aligned_cols=200 Identities=12% Similarity=0.091 Sum_probs=99.9
Q ss_pred CCCCEEEEEeCC----CcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCC------CcEEEEe
Q psy10778 334 PDCHTLWLGLTS----GNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSED------GTCLLWD 403 (556)
Q Consensus 334 ~dg~~l~tgs~D----g~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D------g~I~iwd 403 (556)
.++..++.|+.+ ..+.+||..++........ .+...+......-.++.+..++.+++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~-~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIE-VSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECC-CCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccC-CCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 466788888754 3577777765421100000 0000011111122233332267778887754 3578899
Q ss_pred CCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCCcEEEEeec-------CCCeEEEEEeeCC
Q psy10778 404 INTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINAQLITSLAS-------ELRITSVTFSNAP 476 (556)
Q Consensus 404 l~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g~~i~~~~~-------~~~i~~i~~s~~p 476 (556)
..+.+....-..+. ...-.+++...++..++.|+... .+.+.+||.....-..... .....++.+. .
T Consensus 475 ~~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~---~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~--~ 548 (695)
T 2zwa_A 475 MKTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTE---GPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD--P 548 (695)
T ss_dssp TTTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCS---SCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE--T
T ss_pred CCCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCC---CCCEEEEECCCCceEEccCCCCCCCcccceeEEEEe--C
Confidence 98865433221101 11112233323667777776322 1278999987544333321 1122334445 3
Q ss_pred C-CCcceEEEEEeC--C-----CeEEEEeCCCCe--------EEEEecCCCCCCeEEEEEecCCCEEEEEcCC-------
Q psy10778 477 E-GVSQNVIVTGHS--D-----GTIQLWSGYKLA--------HLLTLNTNVALPVIAVTYSCDSQHLYASNTE------- 533 (556)
Q Consensus 477 d-g~~~~~l~tg~~--d-----g~I~iwd~~~~~--------~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~D------- 533 (556)
. + ++++.|+. + ..+.+||+.+.+ .+........... +++...++++++.|+.+
T Consensus 549 ~~~---~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 549 VSK---QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp TTT---EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCT
T ss_pred CCC---EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCC
Confidence 3 5 68888875 2 468899987665 2222111111112 23334446777777743
Q ss_pred -CcEEEEEcCCC
Q psy10778 534 -GLVIIWESSSH 544 (556)
Q Consensus 534 -g~V~vwdl~~~ 544 (556)
..+.+||+.+.
T Consensus 625 ~~~v~~yd~~t~ 636 (695)
T 2zwa_A 625 TNSIISLDPLSE 636 (695)
T ss_dssp TTSEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 46889998774
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.77 E-value=35 Score=35.98 Aligned_cols=230 Identities=11% Similarity=0.079 Sum_probs=128.8
Q ss_pred eEEeccCCCeEEEEeCCCCCCcceEcCC------------------------CCCceE--EEEEc---CCCCEEEEEeC-
Q psy10778 295 MICWNECDNLIRLKMSKELPATPVIRPP------------------------LGATIA--TATTA---PDCHTLWLGLT- 344 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~~~~~~~~~------------------------h~~~V~--~i~~s---~dg~~l~tgs~- 344 (556)
.+.+|+..|.|+|+-+-+.+.+..+..- ..+... .+++. -||++|+.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 4778888999999887766544332210 011111 22222 25777877663
Q ss_pred CCcEEEEEeeeccCcccccccCCCeEee-CCCccEEEEEEc--cCCCEEEEEcC-------CCcE------------EEE
Q psy10778 345 SGNILVYEYELNASTNKIEFCKPPTILL-GHSACVTDLYLC--AGFSVAVSSSE-------DGTC------------LLW 402 (556)
Q Consensus 345 Dg~I~vwd~~~~~~~~~~~~~~~~~~l~-~h~~~V~~l~~s--~~~~~l~sgs~-------Dg~I------------~iw 402 (556)
+..|-..+++.. ++.+.+. -....+.++++- |...+++.+++ ||.. ...
T Consensus 152 n~RvAri~l~~~---------~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~i 222 (638)
T 3sbq_A 152 NSRVARIRLDIM---------KCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAI 222 (638)
T ss_dssp TTEEEEEETTTT---------EEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEE
T ss_pred CcceEEEECCcE---------eeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEE
Confidence 344555555443 1112222 244567777775 56667776654 3331 112
Q ss_pred eCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecC----------cCCCC-------------------------e
Q psy10778 403 DINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTT----------KTGGS-------------------------I 447 (556)
Q Consensus 403 dl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~----------~~~d~-------------------------~ 447 (556)
|..+.+...++.- .+....+...+++++.++.|.+. .++.. .
T Consensus 223 D~~tm~v~~Qv~v---~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 223 DAETMEMAFQVIV---DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp ETTTCSEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred cCCccEEEEEEEc---CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 3333333222222 22334455677888888888755 11112 2
Q ss_pred EEEEEeCC------cEEEEeecCCCeEEEEEeeCCCCCcceEEEE-EeCCCeEEEEeCCCC------e-------EEEEe
Q psy10778 448 LRLHTINA------QLITSLASELRITSVTFSNAPEGVSQNVIVT-GHSDGTIQLWSGYKL------A-------HLLTL 507 (556)
Q Consensus 448 I~iwdi~g------~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~t-g~~dg~I~iwd~~~~------~-------~~~~~ 507 (556)
+.+.|.+. ..+..+........+..+ ||| +++++ |-.+.++.++|.... + .+...
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vs--PDG---kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~ 374 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTS--SDG---KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP 374 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEEC--TTS---CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeC--CCC---CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec
Confidence 44444432 122333344556677888 899 55554 557889999998632 1 24444
Q ss_pred cCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 508 NTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 508 ~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
. ..-.....+|+++|....+.--|..|.-|++..
T Consensus 375 e--~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 375 E--LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp B--CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred c--CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 4 245678899999995555666899999999866
No 349
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.73 E-value=23 Score=32.67 Aligned_cols=138 Identities=8% Similarity=-0.100 Sum_probs=76.0
Q ss_pred CCEEEEEcCCCcEEEEeCCCCe------EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeCC-----
Q psy10778 387 FSVAVSSSEDGTCLLWDINTIG------YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTINA----- 455 (556)
Q Consensus 387 ~~~l~sgs~Dg~I~iwdl~~~~------~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~g----- 455 (556)
..+|....+| +++.=...++. ...++-... -..++.++++|++...++ . ++.++-.+...
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~g-w~~~~~laf~P~G~LYaV-~------~G~Ly~~~~~t~~~~~ 74 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGG-WSNFKFLFLSPGGELYGV-L------NDKIYKGTPPTHDNDN 74 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSS-CTTCSEEEECTTSCEEEE-E------TTEEEEESCCCSTTCC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccc-cccceeEEECCCccEEEE-e------CCeEEEECCCCCCccc
Confidence 3455666666 66655554433 122322101 256789999998776665 4 45665555421
Q ss_pred --cEEEEeec--CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeE------EEEecCCCCCCeEEEEEecCCC
Q psy10778 456 --QLITSLAS--ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAH------LLTLNTNVALPVIAVTYSCDSQ 525 (556)
Q Consensus 456 --~~i~~~~~--~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~------~~~~~~~h~~~V~~l~~s~dg~ 525 (556)
..-..+.. -....++.|. ++| .+.++ .||.|+-++-.+... -..+...-=..+..|.+.|+|.
T Consensus 75 W~~s~t~IG~~Gw~~F~a~~fD--~~G---~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~ 147 (236)
T 1tl2_A 75 WMGRAKKIGNGGWNQFQFLFFD--PNG---YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY 147 (236)
T ss_dssp HHHHCEEEECSCGGGCSEEEEC--TTS---CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC
T ss_pred ccccccEecccccccceEEEEC--CCC---CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce
Confidence 11111111 1124678888 898 56665 569998887633110 0111111125689999999997
Q ss_pred EEEEEcCCCcEEEEEcC
Q psy10778 526 HLYASNTEGLVIIWESS 542 (556)
Q Consensus 526 ~l~sgs~Dg~V~vwdl~ 542 (556)
+.++. ||.++-+..+
T Consensus 148 Lyav~--dg~lyr~~~P 162 (236)
T 1tl2_A 148 LYAVH--GQQFYKALPP 162 (236)
T ss_dssp EEEEE--TTEEEEECCC
T ss_pred EEEEe--CCcEEecCCC
Confidence 76665 8876544333
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.51 E-value=27 Score=33.96 Aligned_cols=56 Identities=7% Similarity=-0.076 Sum_probs=27.4
Q ss_pred eEEEEEeCCc---EEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCC------eEEEEeCCCCeEEEEec
Q psy10778 447 ILRLHTINAQ---LITSLASELRITSVTFSNAPEGVSQNVIVTGHSDG------TIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 447 ~I~iwdi~g~---~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg------~I~iwd~~~~~~~~~~~ 508 (556)
.+.+||+... .+..+.....-.+++.. ++ ++++.|+.++ .|.++++.+++.+....
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~---~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW---NN---SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE---TT---EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe---CC---EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 5778888632 22222222111222222 45 7888888543 35556777776655543
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.14 E-value=11 Score=35.89 Aligned_cols=183 Identities=15% Similarity=0.161 Sum_probs=93.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC
Q psy10778 325 ATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI 404 (556)
Q Consensus 325 ~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl 404 (556)
..|..++.... ..++. . ||.|..|-.....+.+.. . .....|..++.......++ . ||.|..|-.
T Consensus 24 ~~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p-----~----~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~ 88 (282)
T 3qhy_B 24 SGVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMP-----A----ATQSGVDAIAAGNYHSLAL--K-DGEVIAWGG 88 (282)
T ss_dssp SSCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCC-----G----GGGSCCCEEEECSSEEEEE--E-TTEEEEEEC
T ss_pred CCCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCC-----c----cCCCCEEEEEeCCCEEEEE--E-CCEEEEeeC
Confidence 35777776543 33333 4 899999986644222211 1 1123566666654433333 4 899999976
Q ss_pred CCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--CcEEEEeecCCCeEEEEEeeCCCCCcce
Q psy10778 405 NTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--AQLITSLASELRITSVTFSNAPEGVSQN 482 (556)
Q Consensus 405 ~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g~~i~~~~~~~~i~~i~~s~~pdg~~~~ 482 (556)
.....+- ++..- ...|..++.......+++ ++.|+.|-.+ |++-........|..++.. .. .
T Consensus 89 n~~Gqlg-~P~~~-~~~v~~ia~G~~hs~al~--------~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--~~----~ 152 (282)
T 3qhy_B 89 NEDGQTT-VPAEA-RSGVDAIAAGAWASYALK--------DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--VY----T 152 (282)
T ss_dssp CTTSTTC-CCGGG-SSSEEEEEEETTEEEEEE--------TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--SS----E
T ss_pred CCCCCCC-CCccc-CCCeEEEECcCCEEEEEe--------CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--cC----E
Confidence 5421111 01001 235666665543222222 4677777654 3321111234567777655 22 3
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCCC
Q psy10778 483 VIVTGHSDGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSSH 544 (556)
Q Consensus 483 ~l~tg~~dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~ 544 (556)
.++. . ||.|+.|-......+..-. .....|..++-..+. .++- .||.|+.|-....
T Consensus 153 ~~~l-~-~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G~~h--s~al-~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 153 ALAV-K-NGGVIAWGDNYFGQTTVPA-EAQSGVDDVAGGIFH--SLAL-KDGKVIAWGDNRY 208 (282)
T ss_dssp EEEE-E-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSE--EEEE-ETTEEEEEECCTT
T ss_pred EEEE-E-CCEEEEecCCCCCCCCCce-ecCCCeEEEEecCCE--EEEE-ECCeEEEEECCCC
Confidence 3333 3 7999999764322111111 113567777765433 3333 5999999987663
No 352
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=81.94 E-value=40 Score=32.85 Aligned_cols=196 Identities=11% Similarity=0.074 Sum_probs=101.1
Q ss_pred CCCceEEEEEcC---CCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcE
Q psy10778 323 LGATIATATTAP---DCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTC 399 (556)
Q Consensus 323 h~~~V~~i~~s~---dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I 399 (556)
....|.++...+ +..++++++.+|.++--.+..-..... .......+.. .+.+..+........++..+..|.+
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r--~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~ 169 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS--GGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQS 169 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS--SCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEE
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc--CceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeE
Confidence 345566654433 468999999999999877654311110 0001112333 3455555555555677778889998
Q ss_pred EEEeCC--CC---------eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--------CcEEEE
Q psy10778 400 LLWDIN--TI---------GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--------AQLITS 460 (556)
Q Consensus 400 ~iwdl~--~~---------~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--------g~~i~~ 460 (556)
..+... .- .....+.. ...|.++...+++..++.++ ..|.++.-.+. ++-+..
T Consensus 170 ~rf~~~~~eip~~gr~a~Gv~~i~L~~---~d~Vv~~~~~~~~~~ll~~T-----~~G~~Krt~l~e~~~~~R~~~G~~~ 241 (327)
T 3uc1_A 170 IRFSATDEALRPMGRATSGVQGMRFNI---DDRLLSLNVVREGTYLLVAT-----SGGYAKRTAIEEYPVQGRGGKGVLT 241 (327)
T ss_dssp EEEECCTTTSCCCCTTSBCEESSCCCT---TCCEEEEEECCTTCEEEEEE-----TTSEEEEEEGGGSCBCCTTSCCEES
T ss_pred EEEECcccccCcCCcCCCCeeeecCCC---CCEEEEEEEECCCCEEEEEe-----CCCcEEEEEHHHccccCcCCCcEEE
Confidence 888766 31 11112332 45677776666667788888 78888887752 122222
Q ss_pred ee--c-CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecCCCCCCeEEEEEecC-CCEEEE
Q psy10778 461 LA--S-ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNTNVALPVIAVTYSCD-SQHLYA 529 (556)
Q Consensus 461 ~~--~-~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~s~d-g~~l~s 529 (556)
++ . .+.+..+... .+. ..++..+.+|.+.-++... .+-++.+.......|.+++..+. ...+.+
T Consensus 242 ~~l~~~~d~lv~~~~~--~~~---~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~ 316 (327)
T 3uc1_A 242 VMYDRRRGRLVGALIV--DDD---SELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNA 316 (327)
T ss_dssp SCCCTTTCSEEEEEEE--CTT---CEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC--------
T ss_pred EEecCCCCeEEEEEEe--CCC---ccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEE
Confidence 22 1 3455555444 223 3555566667666665422 12233333223456666665543 344555
Q ss_pred EcCCC
Q psy10778 530 SNTEG 534 (556)
Q Consensus 530 gs~Dg 534 (556)
.+++|
T Consensus 317 ~~~~g 321 (327)
T 3uc1_A 317 VDANG 321 (327)
T ss_dssp -----
T ss_pred EecCC
Confidence 55554
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=81.18 E-value=42 Score=32.66 Aligned_cols=205 Identities=11% Similarity=0.040 Sum_probs=116.6
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCcEEEEEee---eccC--cccccccCCCeEeeCCCccEEEEEEcc---CCCEEEEEc
Q psy10778 323 LGATIATATTAPDCHTLWLGLTSGNILVYEYE---LNAS--TNKIEFCKPPTILLGHSACVTDLYLCA---GFSVAVSSS 394 (556)
Q Consensus 323 h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~---~~~~--~~~~~~~~~~~~l~~h~~~V~~l~~s~---~~~~l~sgs 394 (556)
..+.+..+........|+.-+..|.++-.... .... .+..+ ...-.+. ....|.++..-. +...++.++
T Consensus 40 e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i--~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T 116 (327)
T 3uc1_A 40 QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHV--ANLLAFQ-PEERIAQVIQIRGYTDAPYLVLAT 116 (327)
T ss_dssp GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEH--HHHTTCC-TTCCEEEEEEESSTTSSSEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEH--HHccCCC-CCCEEEEEEEeccCCCCCEEEEEc
Confidence 34556666555556677777777876654432 2110 11110 0000122 234455554433 467999999
Q ss_pred CCCcEEEEeCCCCe-------EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--C----------
Q psy10778 395 EDGTCLLWDINTIG-------YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--A---------- 455 (556)
Q Consensus 395 ~Dg~I~iwdl~~~~-------~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g---------- 455 (556)
.+|.++.-.+.... ....++. ...+..+........|+..+ ..|.+..+... .
T Consensus 117 ~~G~iKr~~l~~~~~~~r~G~~~i~lke---~D~lv~~~~~~~~d~ill~T-----~~G~~~rf~~~~~eip~~gr~a~G 188 (327)
T 3uc1_A 117 RNGLVKKSKLTDFDSNRSGGIVAVNLRD---NDELVGAVLCSAGDDLLLVS-----ANGQSIRFSATDEALRPMGRATSG 188 (327)
T ss_dssp TTSEEEEEEGGGGCCCCSSCEESCBCCT---TCCEEEEEEECTTCEEEEEE-----TTSEEEEEECCTTTSCCCCTTSBC
T ss_pred CCCEEEEeEHHHhhccccCceEEEEECC---CCEEEEEEEecCCCEEEEEE-----CCCeEEEEECcccccCcCCcCCCC
Confidence 99999998765422 1223333 45566666555666777777 67877766543 1
Q ss_pred cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecC-CCCCCeEEEEEecCCCEE
Q psy10778 456 QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNT-NVALPVIAVTYSCDSQHL 527 (556)
Q Consensus 456 ~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~-~h~~~V~~l~~s~dg~~l 527 (556)
...-.+.....|.++... +++ ..+++.+..|.++.-.+.. ++-+..+.. .-...+..+....+...+
T Consensus 189 v~~i~L~~~d~Vv~~~~~--~~~---~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i 263 (327)
T 3uc1_A 189 VQGMRFNIDDRLLSLNVV--REG---TYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSEL 263 (327)
T ss_dssp EESSCCCTTCCEEEEEEC--CTT---CEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEE
T ss_pred eeeecCCCCCEEEEEEEE--CCC---CEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccE
Confidence 111122335667777665 444 5888999999998876522 223333332 113456666555555677
Q ss_pred EEEcCCCcEEEEEcCC
Q psy10778 528 YASNTEGLVIIWESSS 543 (556)
Q Consensus 528 ~sgs~Dg~V~vwdl~~ 543 (556)
+..+.+|.+.-+....
T Consensus 264 ~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 264 YAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEGGGCEEEEEGGG
T ss_pred EEEcCCCeEEEEehhh
Confidence 7788888888887654
No 354
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=80.47 E-value=43 Score=32.25 Aligned_cols=235 Identities=9% Similarity=0.017 Sum_probs=122.8
Q ss_pred eEEeccCCCeEEEEeCCCCC-------CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELP-------ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~-------~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+++.-+.+|.|+--.+.+-+ ....+.....+.+..+........|+..+..|.+.-.....-+..+......+
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~ 84 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRP 84 (307)
T ss_dssp EEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeE
Confidence 44555677777655443211 11111112334555555455556777778888876655432111111000010
Q ss_pred C---eEeeCCCccEEEEEEc---cCCCEEEEEcCCCcEEEEeCCCC-----eEEE--EeCCCCCCCCeeEEEEeCCCCeE
Q psy10778 368 P---TILLGHSACVTDLYLC---AGFSVAVSSSEDGTCLLWDINTI-----GYIR--EIPCVDPNTPVSHVTMSETNGEI 434 (556)
Q Consensus 368 ~---~~l~~h~~~V~~l~~s---~~~~~l~sgs~Dg~I~iwdl~~~-----~~v~--~l~~~h~~~~V~~l~~sp~~~~i 434 (556)
+ -.+. ....|.++..- .+...++..+..|.++.-.+... .-+. .+.. ...+..+........+
T Consensus 85 i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~---~d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 85 IVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVD---GDELIGVDLTSGEDEV 160 (307)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCT---TCCEEEEEEECTTCEE
T ss_pred hhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECC---CCEEEEEEEeCCCCEE
Confidence 0 1122 23445555432 34567889999999999876421 1122 2333 3455555555555667
Q ss_pred EEEeecCcCCCCeEEEEEeC-----C-----cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC----
Q psy10778 435 ASVLQTTKTGGSILRLHTIN-----A-----QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK---- 500 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~-----g-----~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~---- 500 (556)
+..+ ..|.+..+... | ...-.+...+.|.++... .++ ..+++.+..|.++-.++..
T Consensus 161 ~l~T-----~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~--~~~---~~ll~~T~~G~~Kr~~~~e~~~~ 230 (307)
T 1zi0_A 161 MLFS-----AEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVP--RGD---GAILTATQNGYGKRTAVAEYPTK 230 (307)
T ss_dssp EEEE-----TTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECC--CSS---CEEEEEETTSEEEEECGGGSCCC
T ss_pred EEEC-----CCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEe--cCC---CEEEEEEcCCceEEEEHHHhccC
Confidence 6666 67887777652 1 111223345677777654 444 5688889999998887622
Q ss_pred ---CeEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 501 ---LAHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 501 ---~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
++-+..+.. .....+..+....+...++..+.+|.+.-..+..
T Consensus 231 ~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 231 SRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp CTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 121222221 1235566655544556667778888887777655
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.06 E-value=66 Score=36.37 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=48.2
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCCC---CCCCCeeEEEEeCCC-CeEEEEeecCcCCCCeEEEEE
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPCV---DPNTPVSHVTMSETN-GEIASVLQTTKTGGSILRLHT 452 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~~---h~~~~V~~l~~sp~~-~~i~s~s~~~~~~d~~I~iwd 452 (556)
.+.+++..++..++++-+.|+++++|++.+++++.+.... .+..........+.. ..+.+..... .++..++|.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~--~~g~F~~~~ 314 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDN--SHGSFSIYK 314 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCS--SSCEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCC--CCcEEEEEE
Confidence 5677788888889999999999999999999998875320 101122223334433 3333332111 567788887
Q ss_pred eC
Q psy10778 453 IN 454 (556)
Q Consensus 453 i~ 454 (556)
+.
T Consensus 315 ~~ 316 (950)
T 4gq2_M 315 LN 316 (950)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 356
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.03 E-value=86 Score=30.72 Aligned_cols=215 Identities=11% Similarity=0.048 Sum_probs=105.8
Q ss_pred CCCeEEEEeCCCCCCcceE-----cCCCCCceEEEEEcCC---CCEEEEE-e--CCCcEEEEEeeeccCc-ccccccCC-
Q psy10778 301 CDNLIRLKMSKELPATPVI-----RPPLGATIATATTAPD---CHTLWLG-L--TSGNILVYEYELNAST-NKIEFCKP- 367 (556)
Q Consensus 301 ~Dg~I~lw~~~~~~~~~~~-----~~~h~~~V~~i~~s~d---g~~l~tg-s--~Dg~I~vwd~~~~~~~-~~~~~~~~- 367 (556)
..|.|++++..+++..... ..........++++|+ ...|++. + .++.|.-|.+...... ......+.
T Consensus 51 ~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i 130 (347)
T 3das_A 51 DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTV 130 (347)
T ss_dssp TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEE
T ss_pred cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEE
Confidence 3667776665444322111 1123457889999995 3445443 2 3344444444321000 01100010
Q ss_pred CeEee-CCCccEEEEEEccCCCEEEEEcC-------------CCcEEEEeCCCC---------eEEEEeCCCCCCCCeeE
Q psy10778 368 PTILL-GHSACVTDLYLCAGFSVAVSSSE-------------DGTCLLWDINTI---------GYIREIPCVDPNTPVSH 424 (556)
Q Consensus 368 ~~~l~-~h~~~V~~l~~s~~~~~l~sgs~-------------Dg~I~iwdl~~~---------~~v~~l~~~h~~~~V~~ 424 (556)
+..+. +....-..|+|.|+|.+.++.+. .|.|.-.+.... ..+... + + .....
T Consensus 131 ~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~-G-~--RNp~G 206 (347)
T 3das_A 131 FRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY-G-H--RNVQG 206 (347)
T ss_dssp EEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB-C-C--SBCCE
T ss_pred EEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee-C-C--CCcce
Confidence 11121 11223457999999987777542 244444444311 111111 2 2 33568
Q ss_pred EEEeCCCCeEEEEeecCcCCCC--eEEEEEeCCc------------------EEEEeecC-CCeEEEEEeeCCCCCcceE
Q psy10778 425 VTMSETNGEIASVLQTTKTGGS--ILRLHTINAQ------------------LITSLASE-LRITSVTFSNAPEGVSQNV 483 (556)
Q Consensus 425 l~~sp~~~~i~s~s~~~~~~d~--~I~iwdi~g~------------------~i~~~~~~-~~i~~i~~s~~pdg~~~~~ 483 (556)
++|+|++...++-.. .++ .|.+..- |. ++..+.+. .....++|. +| .+
T Consensus 207 la~dp~G~L~~~d~g----~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~---~g---~~ 275 (347)
T 3das_A 207 LAWDDKQRLFASEFG----QDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA---EG---SV 275 (347)
T ss_dssp EEECTTCCEEEEECC----SSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE---TT---EE
T ss_pred EEECCCCCEEEEecC----CCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE---cC---ce
Confidence 999997655444321 222 2332211 11 12222222 356778887 45 66
Q ss_pred EEEEeCCCeEEEEeCCCCeE----EEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 484 IVTGHSDGTIQLWSGYKLAH----LLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 484 l~tg~~dg~I~iwd~~~~~~----~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
++..-..+.|....+..... ...+. +....++.|+..|||.++++.+
T Consensus 276 ~~~~l~~~~l~~v~~~~~~~~~~~e~~l~-~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 276 WMAGLRGERLWRIPLKGTAAAADPQAFLE-GEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEESTTCSEEEEEEETTEESSCCEEEST-TTSSCEEEEEEEETTEEEEEEC
T ss_pred eeccccCCEEEEEEecCCceecceEEeec-CCCCCccEEEECCCCcEEEEEc
Confidence 66666666666666544332 22333 3457899999999997766644
No 357
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=69.08 E-value=94 Score=30.77 Aligned_cols=237 Identities=9% Similarity=-0.014 Sum_probs=128.1
Q ss_pred eEEeccCCCeEEEEeCC-------CCCCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeee---ccCcccccc
Q psy10778 295 MICWNECDNLIRLKMSK-------ELPATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYEL---NASTNKIEF 364 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~-------~~~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~---~~~~~~~~~ 364 (556)
+++..+.+|.|+--.+. .++....+.....+.+..+........|+..+..|.+.-+.... ......-..
T Consensus 9 ~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~ 88 (370)
T 3l6v_A 9 VVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRP 88 (370)
T ss_dssp EEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcC
Confidence 55566777777764321 12223334444566777776666677788888888876655432 111111000
Q ss_pred cCCCeEeeCCCccEEEEEEcc---CCCEEEEEcCCCcEEEEeCCCC-------eEEEEeCCCCCCCCeeEEEEeCCCCeE
Q psy10778 365 CKPPTILLGHSACVTDLYLCA---GFSVAVSSSEDGTCLLWDINTI-------GYIREIPCVDPNTPVSHVTMSETNGEI 434 (556)
Q Consensus 365 ~~~~~~l~~h~~~V~~l~~s~---~~~~l~sgs~Dg~I~iwdl~~~-------~~v~~l~~~h~~~~V~~l~~sp~~~~i 434 (556)
....-.+. ....|.++..-. +...++.++..|.++.-.+... .....+.. ...+..+........|
T Consensus 89 i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~---~d~lv~v~~~~~~~~i 164 (370)
T 3l6v_A 89 IINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE---GDALVGVALTDGDRDV 164 (370)
T ss_dssp GGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT---TCCEEEEEEECSCCEE
T ss_pred HhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC---CCEEEEEEEeCCCceE
Confidence 00001122 234555554432 4568999999999999876432 11122333 4455555555555667
Q ss_pred EEEeecCcCCCCeEEEEEeC-----C-----cEEEEeecCCCeEEEEEeeCC----------------------------
Q psy10778 435 ASVLQTTKTGGSILRLHTIN-----A-----QLITSLASELRITSVTFSNAP---------------------------- 476 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~-----g-----~~i~~~~~~~~i~~i~~s~~p---------------------------- 476 (556)
+..+ ..|.+..+... | -..-.+.....|.++...+..
T Consensus 165 ~l~T-----~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~ 239 (370)
T 3l6v_A 165 LLFA-----SNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVID 239 (370)
T ss_dssp EEEE-----TTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----------------------------
T ss_pred EEEe-----CCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccc
Confidence 7776 67777777652 1 111122334566666555210
Q ss_pred -----CCCcceEEEEEeCCCeEEEEeCC-------CCeEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 477 -----EGVSQNVIVTGHSDGTIQLWSGY-------KLAHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 477 -----dg~~~~~l~tg~~dg~I~iwd~~-------~~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
++ ..+++.+..|..+...+. .++-+..+.. ...+.+..+.+..+...++..+..|.+.-..+..
T Consensus 240 ~~~~~~~---~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 240 VADNGDV---AYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp ----------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGGG
T ss_pred cccccCC---ceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHhh
Confidence 22 578889999998887663 2222333322 1234566655555555666677777776666544
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=61.26 E-value=1.1e+02 Score=31.24 Aligned_cols=104 Identities=10% Similarity=0.072 Sum_probs=60.9
Q ss_pred CeeEEEEeCCCC-eEEEEeecCcCCCCeEEEEEeCCcE----EEEee----------cCCCeEEEEEeeCCC----CCcc
Q psy10778 421 PVSHVTMSETNG-EIASVLQTTKTGGSILRLHTINAQL----ITSLA----------SELRITSVTFSNAPE----GVSQ 481 (556)
Q Consensus 421 ~V~~l~~sp~~~-~i~s~s~~~~~~d~~I~iwdi~g~~----i~~~~----------~~~~i~~i~~s~~pd----g~~~ 481 (556)
....|++.|++. .++++. +.|.|++++.++.. +..+. .+..+..|+++ |+ +
T Consensus 15 ~P~~~a~~pdG~~rl~V~e-----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~--P~f~~n~--- 84 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILE-----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFH--PNYKKNG--- 84 (463)
T ss_dssp SEEEEECCSSSSCCEEEEE-----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEEC--TTHHHHC---
T ss_pred CceEEEECCCCCeEEEEEe-----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeC--CCCcCCC---
Confidence 467899999985 455555 78999999866432 22221 13578899999 65 4
Q ss_pred eEEEEEeC--C----------CeEEEEeCCC----------CeEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 482 NVIVTGHS--D----------GTIQLWSGYK----------LAHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 482 ~~l~tg~~--d----------g~I~iwd~~~----------~~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
.+.++-+. + ..|.-|.+.. .+.+..+.. .....-..|+|.|||.+.++.++.+
T Consensus 85 ~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 85 KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 34443332 1 1333344421 233333331 1123467899999998877766543
No 359
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=60.99 E-value=1.2e+02 Score=29.10 Aligned_cols=194 Identities=8% Similarity=-0.008 Sum_probs=112.0
Q ss_pred CCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCe--EeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC---C-
Q psy10778 334 PDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPT--ILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT---I- 407 (556)
Q Consensus 334 ~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~--~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~---~- 407 (556)
++...+++.+.+|.|+--.+..-...... ..-+. .+.. .+.+..+..+.....++..+..|.++-..... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~--~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTG--GKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSS--CCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC--
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccC--CCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCC
Confidence 45678899999999987665432100000 00011 1222 24455555555566777778888877665432 1
Q ss_pred -----eE---EEEeCCCCCCCCeeEEEEeC---CCCeEEEEeecCcCCCCeEEEEEeC--------CcEEEEeecCCCeE
Q psy10778 408 -----GY---IREIPCVDPNTPVSHVTMSE---TNGEIASVLQTTKTGGSILRLHTIN--------AQLITSLASELRIT 468 (556)
Q Consensus 408 -----~~---v~~l~~~h~~~~V~~l~~sp---~~~~i~s~s~~~~~~d~~I~iwdi~--------g~~i~~~~~~~~i~ 468 (556)
.. .-.+.. ...|..+...+ +...++..+ ..|.++...+. |.....+...+.+.
T Consensus 83 r~~~G~~i~~~l~l~~---~e~i~~~~~~~~~~~~~~ll~~T-----~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv 154 (312)
T 1suu_A 83 RASKGQNISELINLGD---QEEILTIKNSKDLTDDAYLLLTT-----ASGKIARFESTDFKAVKSRGVIVIKLNDKDFVT 154 (312)
T ss_dssp -----CBGGGTSCCCT---TCCEEEEEEESCCCTTCEEEEEE-----TTSEEEEEEGGGGCC----CEECBCCCTTCCEE
T ss_pred ccCCCcChhhccCCCC---CCEEEEEEEeccCCCCCEEEEEe-----CCCeEEEEEHHHhhccCCCcEEEEecCCCCEEE
Confidence 11 011222 34555554443 456677777 88999888773 22222233456677
Q ss_pred EEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEc
Q psy10778 469 SVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWES 541 (556)
Q Consensus 469 ~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl 541 (556)
.+... .+. ..++..+.+|.+..+.... .+-+..+.......|.++....++..+++.+..|......+
T Consensus 155 ~~~~~--~~~---~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 155 SAEIV--FKD---EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EEEEE--CTT---CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EEEEe--CCC---CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 76665 333 5677888889888886532 22233333223456777766666677888899999998888
Q ss_pred CC
Q psy10778 542 SS 543 (556)
Q Consensus 542 ~~ 543 (556)
..
T Consensus 230 ~e 231 (312)
T 1suu_A 230 SK 231 (312)
T ss_dssp GG
T ss_pred HH
Confidence 55
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=60.84 E-value=84 Score=32.17 Aligned_cols=107 Identities=10% Similarity=0.022 Sum_probs=60.7
Q ss_pred ceEEEEEcCCCC-EEEEEeCCCcEEEEEeeeccCcccccccCCCeEe-----e----CCCccEEEEEEccC----CCEEE
Q psy10778 326 TIATATTAPDCH-TLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL-----L----GHSACVTDLYLCAG----FSVAV 391 (556)
Q Consensus 326 ~V~~i~~s~dg~-~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-----~----~h~~~V~~l~~s~~----~~~l~ 391 (556)
.-+.|+|.|+|. .|+++...|.|++++..... .. ..+..+ . +.......|+++|+ +.+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~-~~-----~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEI-FK-----EPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCB-CS-----SCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCe-ee-----eeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 457899999986 45556778999888643210 00 111111 1 12467889999996 34444
Q ss_pred EEcC--C----------CcEEEEeCCC----------CeEEEEeC-CCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 392 SSSE--D----------GTCLLWDINT----------IGYIREIP-CVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 392 sgs~--D----------g~I~iwdl~~----------~~~v~~l~-~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
+-+. + ..|.-|.+.. .+.+..+. ... ......|+|.|||.+.++.+.
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~-~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHR-KHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSS-SSCEEEEEECTTSCEEEEECC
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCC-cccCCcEeECCCCcEEEEeCC
Confidence 3322 1 1344465532 12333332 101 345789999999988777764
No 361
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=54.24 E-value=1.6e+02 Score=28.42 Aligned_cols=235 Identities=10% Similarity=0.007 Sum_probs=123.2
Q ss_pred eEEeccCCCeEEEEeCCCC--CCcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeee---ccC--cccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKEL--PATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYEL---NAS--TNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~--~~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~---~~~--~~~~~~~~~ 367 (556)
+++.-+.+|.|+--....- ...........+.+..+........|+..+..|.+.-..... ... .+... ..
T Consensus 7 ~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i--~~ 84 (323)
T 1wp5_A 7 VIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHI--AN 84 (323)
T ss_dssp EEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEG--GG
T ss_pred EEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcCh--hh
Confidence 4445566777765533210 000011112345555555555567777778888876655432 211 11110 00
Q ss_pred CeEeeCCCccEEEE-EEcc--CCCEEEEEcCCCcEEEEeCCCC------eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEe
Q psy10778 368 PTILLGHSACVTDL-YLCA--GFSVAVSSSEDGTCLLWDINTI------GYIREIPCVDPNTPVSHVTMSETNGEIASVL 438 (556)
Q Consensus 368 ~~~l~~h~~~V~~l-~~s~--~~~~l~sgs~Dg~I~iwdl~~~------~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s 438 (556)
.-.+. ....|.++ .... +...++.++.+|.++.-.+... +-+..+.... ...+..+........|+..+
T Consensus 85 ~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T 162 (323)
T 1wp5_A 85 IIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVT 162 (323)
T ss_dssp TSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEE
T ss_pred ccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEe
Confidence 11122 22345554 3332 2567889999999999877421 1222222201 45565555555556677777
Q ss_pred ecCcCCCCeEEEEEeC-----Cc-----EEEEeecCCCeEEEEEeeCCCCCcce-EEEEEeCCCeEEEEeCCC-------
Q psy10778 439 QTTKTGGSILRLHTIN-----AQ-----LITSLASELRITSVTFSNAPEGVSQN-VIVTGHSDGTIQLWSGYK------- 500 (556)
Q Consensus 439 ~~~~~~d~~I~iwdi~-----g~-----~i~~~~~~~~i~~i~~s~~pdg~~~~-~l~tg~~dg~I~iwd~~~------- 500 (556)
.+|.+..+..+ |+ ....+.....|.++... +++ . .+++.+..|..+..++..
T Consensus 163 -----~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~--~~~---~~~ll~vt~~G~gKr~~~~e~~~~~Rg 232 (323)
T 1wp5_A 163 -----HNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLI--TSK---DESIVVATQRGAVKKMKLTEFEKATRA 232 (323)
T ss_dssp -----TTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEE--CCT---TCEEEEEETTSEEEEEEGGGSCCCCTT
T ss_pred -----CCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEE--cCC---CcEEEEEECCCceEEEEHHHccccCCC
Confidence 78888877653 21 11122335567777655 333 3 688888888888776532
Q ss_pred CeEEEEecC--CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 501 LAHLLTLNT--NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 501 ~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
++-+..+.. .....+..+....++..++..+.+|.+.-..+..
T Consensus 233 ~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 233 KRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred CCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 222333321 1122455444444455666778888887777755
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.81 E-value=1.7e+02 Score=27.90 Aligned_cols=235 Identities=7% Similarity=-0.010 Sum_probs=122.8
Q ss_pred eEEeccCCCeEEEEeCCCCC-------CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCC
Q psy10778 295 MICWNECDNLIRLKMSKELP-------ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKP 367 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~-------~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~ 367 (556)
+++..+.+|.|+--....-+ ....+.....+.+..+........++..+..|.++-.....-+..+......+
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~ 89 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQN 89 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CB
T ss_pred EEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcC
Confidence 44455667777665443211 11111222334555555555567788888889877666532111000000000
Q ss_pred ---CeEeeCCCccEEEEEEcc---CCCEEEEEcCCCcEEEEeCCCC-------eEEEEeCCCCCCCCeeEEEEeCCCCeE
Q psy10778 368 ---PTILLGHSACVTDLYLCA---GFSVAVSSSEDGTCLLWDINTI-------GYIREIPCVDPNTPVSHVTMSETNGEI 434 (556)
Q Consensus 368 ---~~~l~~h~~~V~~l~~s~---~~~~l~sgs~Dg~I~iwdl~~~-------~~v~~l~~~h~~~~V~~l~~sp~~~~i 434 (556)
.-.+.. ...|.++...+ +...++..+..|.++.-.+... .....+.. ...+..+........+
T Consensus 90 i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~---~d~lv~~~~~~~~~~i 165 (312)
T 1suu_A 90 ISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND---KDFVTSAEIVFKDEKV 165 (312)
T ss_dssp GGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT---TCCEEEEEEECTTCEE
T ss_pred hhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC---CCEEEEEEEeCCCCEE
Confidence 111222 23455554433 4567888899999999877432 22222333 4566666665555667
Q ss_pred EEEeecCcCCCCeEEEEEeC-----C-----cEEEEeecCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC----
Q psy10778 435 ASVLQTTKTGGSILRLHTIN-----A-----QLITSLASELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK---- 500 (556)
Q Consensus 435 ~s~s~~~~~~d~~I~iwdi~-----g-----~~i~~~~~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~---- 500 (556)
+..+ .+|.+..+..+ | ...-.+.....+.++... .++ ..+++.+.+|..+...+..
T Consensus 166 ~l~T-----~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v--~~~---~~l~~vt~~G~~kr~~~~e~~~~ 235 (312)
T 1suu_A 166 ICLS-----KKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSV--KEN---PYLLIVSENGYGKRLNMSKISEL 235 (312)
T ss_dssp EEEE-----TTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEEC--TTC---SEEEEEETTSEEEEEEGGGSCBC
T ss_pred EEEe-----CCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEE--CCC---CeEEEEECCCceEEEEHHHhccc
Confidence 7777 78888888763 1 122222335566666654 444 5677888899988887632
Q ss_pred ---CeEEEEecC--CCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 501 ---LAHLLTLNT--NVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 501 ---~~~~~~~~~--~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
++-+..+.. .....+.++....+...+...+..|.+.-....+
T Consensus 236 ~R~~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 236 KRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp CTTCCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEEEEGGG
T ss_pred CCCCCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEEEEccc
Confidence 222222321 1124454443333445566666677555455443
No 363
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=50.52 E-value=1.9e+02 Score=28.24 Aligned_cols=141 Identities=6% Similarity=-0.058 Sum_probs=67.3
Q ss_pred cEEEEEEccC--CCEEEEEcCCCcEEEEeCCCCeEEEEeC------------------CCCCCCCeeEEEEeCC-CCeEE
Q psy10778 377 CVTDLYLCAG--FSVAVSSSEDGTCLLWDINTIGYIREIP------------------CVDPNTPVSHVTMSET-NGEIA 435 (556)
Q Consensus 377 ~V~~l~~s~~--~~~l~sgs~Dg~I~iwdl~~~~~v~~l~------------------~~h~~~~V~~l~~sp~-~~~i~ 435 (556)
.|.++++.|. ...+..+...+-|...+ ..++....+. ... ...+.+|.++|. .+.+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~-~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPD-GPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CC-CCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCC-CCceeEEEECCCCCCEEE
Confidence 5788999862 34455555555554443 2222222221 001 245788999874 45555
Q ss_pred EEeecCcCCCCeEEEEEeCCcEEEEeec--------------CCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC
Q psy10778 436 SVLQTTKTGGSILRLHTINAQLITSLAS--------------ELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL 501 (556)
Q Consensus 436 s~s~~~~~~d~~I~iwdi~g~~i~~~~~--------------~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~ 501 (556)
.+. ..+.|...+-.|+.-..... ...+.++++. +... ..|.++...| |...+- .+
T Consensus 194 vg~-----~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~--~~~~--~~l~vg~~~g-l~~s~D-~G 262 (394)
T 3b7f_A 194 IGM-----SSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQH--PAAP--DILYQQNHCG-IYRMDR-RE 262 (394)
T ss_dssp EEE-----ETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEEC--SSST--TEEEEEETTE-EEEEET-TT
T ss_pred EEE-----CCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEEC--CCCC--CEEEEEcCCe-EEEeCC-CC
Confidence 554 33444443323433222211 1247888888 4311 3566666544 444432 33
Q ss_pred eEEEEecCCC-C---CCeEEEEEecC-CCEEEEE
Q psy10778 502 AHLLTLNTNV-A---LPVIAVTYSCD-SQHLYAS 530 (556)
Q Consensus 502 ~~~~~~~~~h-~---~~V~~l~~s~d-g~~l~sg 530 (556)
+.-..+.... . ..+.+++++|. ...|+++
T Consensus 263 ~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 263 GVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp TEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 3333332111 1 33567888763 3344444
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.35 E-value=31 Score=39.96 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=31.9
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeC
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIP 414 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~ 414 (556)
.+.+++..++..++++-+.|++++||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788899999999999999999999988754
No 365
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=47.25 E-value=2e+02 Score=27.64 Aligned_cols=193 Identities=11% Similarity=0.101 Sum_probs=108.8
Q ss_pred CCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC---CC----
Q psy10778 334 PDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI---NT---- 406 (556)
Q Consensus 334 ~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl---~~---- 406 (556)
|+...+++.+.+|.|+--.+..-.... .....+... +.+..+..+.....++..+..|.+.-... ..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~-----~~~~~lke~-D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~ 76 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASN-----GQDFAMKDT-DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWK 76 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTT-----TCCCCCCTT-CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcC-----ccccccCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCC
Confidence 566788899999999876544221000 001123333 44555555555566777777887665543 21
Q ss_pred --CeEEEE-eCCCCCCCCeeEEEEeCC---CCeEEEEeecCcCCCCeEEEEEeC-------CcEEEE--eecCCCeEEEE
Q psy10778 407 --IGYIRE-IPCVDPNTPVSHVTMSET---NGEIASVLQTTKTGGSILRLHTIN-------AQLITS--LASELRITSVT 471 (556)
Q Consensus 407 --~~~v~~-l~~~h~~~~V~~l~~sp~---~~~i~s~s~~~~~~d~~I~iwdi~-------g~~i~~--~~~~~~i~~i~ 471 (556)
|..+.. +.. .+...|..+..-++ +.+++.++ ..|.++...+. +.-+.. +...+.+..+.
T Consensus 77 a~G~~i~~~i~L-~~~e~Iv~~~~~~~~~~~~~ll~~T-----~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~ 150 (323)
T 1wp5_A 77 DLGQHIANIIPI-DRDEEIIKAIPINDFELNGYFLFVT-----RNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVH 150 (323)
T ss_dssp SCCEEGGGTSCC-CTTCCEEEEEEESCTTSSCEEEEEE-----TTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEE
T ss_pred CCCcChhhccCC-CCCCEEEEEEEecccCCCceEEEEe-----CCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEE
Confidence 232211 111 10345665443332 56678788 89999988763 122222 22345666665
Q ss_pred EeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecCCCCCCeEEEEEecCCC-EEEEEcCCCcEEEEEcCC
Q psy10778 472 FSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNTNVALPVIAVTYSCDSQ-HLYASNTEGLVIIWESSS 543 (556)
Q Consensus 472 ~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~s~dg~-~l~sgs~Dg~V~vwdl~~ 543 (556)
.. .+. ..++..+.+|.+..+.... .+-++.+.......|.++...+++. .+++.+..|..+..++..
T Consensus 151 ~~--~~~---~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 151 LT--DGM---NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EE--CSC---SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred Ee--CCC---CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 55 333 4677788888887776522 2233333323345677776555555 788888899888877755
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.69 E-value=2e+02 Score=26.89 Aligned_cols=111 Identities=10% Similarity=0.062 Sum_probs=67.2
Q ss_pred eEEeccCCCeEEEEeCCCCC----CcceEcCCCCCceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeE
Q psy10778 295 MICWNECDNLIRLKMSKELP----ATPVIRPPLGATIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTI 370 (556)
Q Consensus 295 ~l~~gs~Dg~I~lw~~~~~~----~~~~~~~~h~~~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~ 370 (556)
+++..+.+|.++-.....-. ....+.....+.+..+....+...++..+..|.+..+....-+..+........-.
T Consensus 82 ~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~ 161 (276)
T 3no0_A 82 RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIK 161 (276)
T ss_dssp EEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC
T ss_pred EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEc
Confidence 77778899999887764321 11122223456677776666667888899999988887643221111000000112
Q ss_pred eeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeCCC
Q psy10778 371 LLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDINT 406 (556)
Q Consensus 371 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~ 406 (556)
+.. ...|.++....++..++..++.|.++...+..
T Consensus 162 L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 162 LEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred cCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 222 35666666556667888889999999887653
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.73 E-value=80 Score=35.68 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=31.5
Q ss_pred CeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCCeEEEEec
Q psy10778 466 RITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKLAHLLTLN 508 (556)
Q Consensus 466 ~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~~~~~~~~ 508 (556)
.+.+++.. ++. .++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~--~~~---~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFL--STY---NVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEE--TTT---TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeec--CCC---cEEEEEECCCEEEEEECCCCCeEeeec
Confidence 55666666 565 699999999999999999999988764
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.69 E-value=2.8e+02 Score=27.42 Aligned_cols=138 Identities=9% Similarity=0.009 Sum_probs=77.1
Q ss_pred cEEEEeCCCC--eEEEEeCCCC----CCCCeeEEEEe---CC---CCeEEEEeecCcCCCCeEEEEEeC-CcEEEEee--
Q psy10778 398 TCLLWDINTI--GYIREIPCVD----PNTPVSHVTMS---ET---NGEIASVLQTTKTGGSILRLHTIN-AQLITSLA-- 462 (556)
Q Consensus 398 ~I~iwdl~~~--~~v~~l~~~h----~~~~V~~l~~s---p~---~~~i~s~s~~~~~~d~~I~iwdi~-g~~i~~~~-- 462 (556)
.|.+||+.+. +.++++.-+. ..+.+..+++. +. ++.+|..++. ...-|.++|+. ++..+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~---~~~gLIVydl~~~~swRv~~~~ 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF---LRGALFIYDHKKQDSWNVTHPT 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET---TTTEEEEEETTTTEEEEEECGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC---CCCcEEEEECCCCcEEEEccCC
Confidence 5777899888 8888765411 03457788888 22 1344444322 46789999986 43332221
Q ss_pred -----------------cCCCeEEEEEeeCCC----CCcceEEEEEeCCC-eEEEEe---CCC---CeEEEEecC-CCCC
Q psy10778 463 -----------------SELRITSVTFSNAPE----GVSQNVIVTGHSDG-TIQLWS---GYK---LAHLLTLNT-NVAL 513 (556)
Q Consensus 463 -----------------~~~~i~~i~~s~~pd----g~~~~~l~tg~~dg-~I~iwd---~~~---~~~~~~~~~-~h~~ 513 (556)
....+..|+++ |+ + +.|.-..-.+ .+.--. ++. ...+..+.. +...
T Consensus 201 ~~pd~~~~~~i~G~~~~~~~Gi~gIaLs--p~~~~~~---~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s 275 (381)
T 3q6k_A 201 FKAERPTKFDYGGKEYEFKAGIFGITLG--DRDSEGN---RPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYN 275 (381)
T ss_dssp GSCCSCEEEEETTEEEEECCCEEEEEEC--CCCTTSC---CEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTC
T ss_pred CccccCcceEECCEEeEeccCceEEEec--CCcCCCC---eEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCC
Confidence 02467788888 54 3 4444444333 232222 111 112222221 1113
Q ss_pred CeEEEEEe-cCCCEEEEEcCCCcEEEEEcCC
Q psy10778 514 PVIAVTYS-CDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 514 ~V~~l~~s-~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
.-..++++ .+|.++++--+...|..|+..+
T Consensus 276 ~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 276 DAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 34456775 6787788888889999999875
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=39.06 E-value=2.9e+02 Score=27.04 Aligned_cols=192 Identities=16% Similarity=0.206 Sum_probs=99.2
Q ss_pred CEEEEEeCCCcEEEEEeeeccCcccccc--cCCCeEeeC-CCccEEEEEEccCCCEEEEEcCCCcEEEEeCCCC------
Q psy10778 337 HTLWLGLTSGNILVYEYELNASTNKIEF--CKPPTILLG-HSACVTDLYLCAGFSVAVSSSEDGTCLLWDINTI------ 407 (556)
Q Consensus 337 ~~l~tgs~Dg~I~vwd~~~~~~~~~~~~--~~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~------ 407 (556)
...+.-..||.|..|-.....+.+.... ......+.. ....+..++++......+.-+.||.|..|-....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 4455556788888886543321111000 000011111 1234555666666666677788999999964321
Q ss_pred -----eEEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--Cc--------EEE--Eee--cCCCeE
Q psy10778 408 -----GYIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--AQ--------LIT--SLA--SELRIT 468 (556)
Q Consensus 408 -----~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g~--------~i~--~~~--~~~~i~ 468 (556)
.....+.... ...|..|+.- ..+.++.. .+|.|+.|-.+ |+ ... .+. ....+.
T Consensus 143 ~~~~~~~p~~v~~l~-~~~i~~va~G--~~hs~alt-----~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~ 214 (389)
T 3kci_A 143 NRSPCDRPRVIESLR-GIEVVDVAAG--GAHSACVT-----AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 214 (389)
T ss_dssp SCCCEEEEEECGGGT-TSCEEEEEEC--SSEEEEEE-----TTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred CCccCcCCeEecccC-CCeEEEEEeC--cCeEEEEe-----CCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence 1112222201 2356555554 34444455 78899999654 22 111 111 134566
Q ss_pred EEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC-----------eEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEE
Q psy10778 469 SVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL-----------AHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVI 537 (556)
Q Consensus 469 ~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~-----------~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~ 537 (556)
.++.. ... ...+.-..+|.|+.|-.... .....+.......|..++.. ..+.++-+.||.|+
T Consensus 215 ~ia~G--~g~---~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~ 287 (389)
T 3kci_A 215 DIACG--SGD---AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVY 287 (389)
T ss_dssp EEEEC--CSS---CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEEc--CCC---cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEE
Confidence 66654 212 35556677899999964221 12222321122357776665 34555667899999
Q ss_pred EEEcCC
Q psy10778 538 IWESSS 543 (556)
Q Consensus 538 vwdl~~ 543 (556)
.|=...
T Consensus 288 ~wG~n~ 293 (389)
T 3kci_A 288 TWGKGD 293 (389)
T ss_dssp EEECCG
T ss_pred EEeCCC
Confidence 997654
No 370
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=37.63 E-value=2.7e+02 Score=26.39 Aligned_cols=196 Identities=6% Similarity=0.032 Sum_probs=104.3
Q ss_pred CCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEeeCCCccEEEEEEccCCCEEEEEcCCCcEEEEeC---CC----
Q psy10778 334 PDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTILLGHSACVTDLYLCAGFSVAVSSSEDGTCLLWDI---NT---- 406 (556)
Q Consensus 334 ~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwdl---~~---- 406 (556)
|+...+++.+.+|.|+--.+..-..............+... +.+..+..+.....++..+..|.++-... ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 34567888899999986655321000000000000112222 34444445555556666677887665543 22
Q ss_pred --CeEEE---EeCCCCCCCCeeEEEEe---CCCCeEEEEeecCcCCCCeEEEEEeC--------CcEEEEeecCCCeEEE
Q psy10778 407 --IGYIR---EIPCVDPNTPVSHVTMS---ETNGEIASVLQTTKTGGSILRLHTIN--------AQLITSLASELRITSV 470 (556)
Q Consensus 407 --~~~v~---~l~~~h~~~~V~~l~~s---p~~~~i~s~s~~~~~~d~~I~iwdi~--------g~~i~~~~~~~~i~~i 470 (556)
|..+. .+.. ...|..+..- .++..++.++ ..|.++...+. |.....+...+.+..+
T Consensus 80 a~G~~i~~~l~l~~---~e~i~~~~~~~~~~~~~~ll~~T-----~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~ 151 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQ---DERITAILPVTEFEEGVKVFMAT-----ANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGV 151 (307)
T ss_dssp SCCEEGGGTSCCCT---TCCEEEEEEESCCCTTCEEEEEE-----TTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEE
T ss_pred CCCeEhhhccCCCC---CCEEEEEEEeccCCCCcEEEEEe-----CCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEE
Confidence 22221 2232 4456665442 3455677777 89999988763 1111122234566666
Q ss_pred EEeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecCCCCCCeEEEEEecCCCEEEEEcCCCcEEEEEcCC
Q psy10778 471 TFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNTNVALPVIAVTYSCDSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 471 ~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
... .+. ..++..+.+|.+..+.... .+-+..+.......|.++....++..+++.+..|.++-.++..
T Consensus 152 ~~~--~~~---~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 152 DLT--SGE---DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp EEE--CTT---CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred EEe--CCC---CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 555 333 4677777888877776522 1222223222346677776655667788889999988887744
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.66 E-value=1.2e+02 Score=32.26 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=42.0
Q ss_pred eEEEEEeeCCCCCcceEEEEEeCC------------CeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEE
Q psy10778 467 ITSVTFSNAPEGVSQNVIVTGHSD------------GTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYAS 530 (556)
Q Consensus 467 i~~i~~s~~pdg~~~~~l~tg~~d------------g~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sg 530 (556)
.-.|+|+ +.| +++++-..+ ..+.+.+..+++..+.+.....+.++.++|+||++.|.+.
T Consensus 478 PDNL~fd--~~G---~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFD--KAG---RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEEC--TTC---CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEEC--CCC---CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999 888 666654432 2456667777776666653446889999999999888765
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=35.44 E-value=3.3e+02 Score=26.71 Aligned_cols=196 Identities=8% Similarity=0.032 Sum_probs=110.0
Q ss_pred cCCCCEEEEEeCCCcEEEEEeeeccCcccccccCCCeEe-eCCCccEEEEEEccCCCEEEEEcCCCcEEEEe---CCC--
Q psy10778 333 APDCHTLWLGLTSGNILVYEYELNASTNKIEFCKPPTIL-LGHSACVTDLYLCAGFSVAVSSSEDGTCLLWD---INT-- 406 (556)
Q Consensus 333 s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~sgs~Dg~I~iwd---l~~-- 406 (556)
-++...+++.+.+|.|+--.+..-..... ..+-...+ ....+.+..+........++..+..|.++-.. +..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r--~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRR--GGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCC--CCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhcc--CCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 46778999999999998765432100000 00011111 12345666666666666677777788776554 322
Q ss_pred ----CeEEE---EeCCCCCCCCeeEEEEeC---CCCeEEEEeecCcCCCCeEEEEEeC--------CcEEEEeecCCCeE
Q psy10778 407 ----IGYIR---EIPCVDPNTPVSHVTMSE---TNGEIASVLQTTKTGGSILRLHTIN--------AQLITSLASELRIT 468 (556)
Q Consensus 407 ----~~~v~---~l~~~h~~~~V~~l~~sp---~~~~i~s~s~~~~~~d~~I~iwdi~--------g~~i~~~~~~~~i~ 468 (556)
|..+. .+.. ...|.++..-. ++.+++.++ ..|.++...+. |.....+...+.+.
T Consensus 82 r~a~G~~i~~ll~L~~---~e~Iv~~~~~~~~~~~~~ll~~T-----~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv 153 (370)
T 3l6v_A 82 SNARGRPIINWIPLES---GERVQAVLPVREYADNRYVFMAT-----RNGTVKKTPLSEFAFRLARGKIAINLDEGDALV 153 (370)
T ss_dssp TTSCCEEGGGSCCCCT---TCCEEEEEEESCCCTTCEEEEEE-----TTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEE
T ss_pred cccCCcCHhhccCCCC---CCEEEEEEEeccCCCCcEEEEEe-----CCCeEEEeEHHHhhcccCCceEEEEeCCCCEEE
Confidence 22221 1232 45566554432 345788888 89999988763 22212223345666
Q ss_pred EEEEeeCCCCCcceEEEEEeCCCeEEEEeCCC-------CeEEEEecCCCCCCeEEEEEec-------------------
Q psy10778 469 SVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYK-------LAHLLTLNTNVALPVIAVTYSC------------------- 522 (556)
Q Consensus 469 ~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~-------~~~~~~~~~~h~~~V~~l~~s~------------------- 522 (556)
.+... .+. ..++..+.+|.+..+.... .+-++.+.......|.++...+
T Consensus 154 ~v~~~--~~~---~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (370)
T 3l6v_A 154 GVALT--DGD---RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVE 228 (370)
T ss_dssp EEEEE--CSC---CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------
T ss_pred EEEEe--CCC---ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccc
Confidence 66555 333 4677777788877776422 1223333322345666665554
Q ss_pred ----------------CCCEEEEEcCCCcEEEEEcCC
Q psy10778 523 ----------------DSQHLYASNTEGLVIIWESSS 543 (556)
Q Consensus 523 ----------------dg~~l~sgs~Dg~V~vwdl~~ 543 (556)
++..+++.+..|..+...+..
T Consensus 229 t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 229 TTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ------------------CEEEEEETTSEEEEEEGGG
T ss_pred ccccccccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 446788899999888887755
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.58 E-value=1.2e+02 Score=32.18 Aligned_cols=61 Identities=15% Similarity=-0.013 Sum_probs=44.7
Q ss_pred EEEEEEccCCCEEEEEcCC------------CcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 378 VTDLYLCAGFSVAVSSSED------------GTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 378 V~~l~~s~~~~~l~sgs~D------------g~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
.--|+|++.|.+++.-..+ ..+.+.+..+++..+-+..+. .+.++.++|+||++.|++.-+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECTTSSEEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-CccCcCeeECCCCCEEEEEEE
Confidence 4568999999977765432 235556777787777676633 789999999999988877654
No 374
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.30 E-value=2.1e+02 Score=30.20 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=41.2
Q ss_pred CeEEEEEeeCCCCCcceEEEEEeC------------CCeEEEEeCCCCeEEEEecCCCCCCeEEEEEecCCCEEEEEc
Q psy10778 466 RITSVTFSNAPEGVSQNVIVTGHS------------DGTIQLWSGYKLAHLLTLNTNVALPVIAVTYSCDSQHLYASN 531 (556)
Q Consensus 466 ~i~~i~~s~~pdg~~~~~l~tg~~------------dg~I~iwd~~~~~~~~~~~~~h~~~V~~l~~s~dg~~l~sgs 531 (556)
....|+|. ++| .+.++... ...|..++..+++....+.......++.++|+||++.|+++-
T Consensus 477 sPDnL~fd--~~G---~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFD--KAG---RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEEC--TTC---CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEEC--CCC---CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678898 788 66663221 225777777777765555422346799999999999887653
No 375
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=30.05 E-value=68 Score=34.82 Aligned_cols=37 Identities=8% Similarity=0.230 Sum_probs=29.6
Q ss_pred cEEEEEEccCCCEEEEEcCCCcEEEEeCCCCeEEEEeCC
Q psy10778 377 CVTDLYLCAGFSVAVSSSEDGTCLLWDINTIGYIREIPC 415 (556)
Q Consensus 377 ~V~~l~~s~~~~~l~sgs~Dg~I~iwdl~~~~~v~~l~~ 415 (556)
.|.++.+ +...+++-+.|+++|+||+.+++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 367999999999999999999998876543
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=29.97 E-value=1.5e+02 Score=30.59 Aligned_cols=72 Identities=21% Similarity=0.319 Sum_probs=46.4
Q ss_pred CeEEEEEeeC--CCCCcceEEEEEeCCCeEEEEeCC-CC-------eEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 466 RITSVTFSNA--PEGVSQNVIVTGHSDGTIQLWSGY-KL-------AHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 466 ~i~~i~~s~~--pdg~~~~~l~tg~~dg~I~iwd~~-~~-------~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
..++|+.... .++ ...++..|+.+|.|.-.-+. .+ ..+..+.. ....+|..|.++++...|++++.++
T Consensus 405 ~lT~IaVd~v~~~~~-~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDG-QYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSC-EEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCC-cEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCe
Confidence 5677776632 223 23678889999987544332 21 12333432 2357899999999999999999887
Q ss_pred cEEE
Q psy10778 535 LVII 538 (556)
Q Consensus 535 ~V~v 538 (556)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 377
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=29.49 E-value=1.5e+02 Score=34.26 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=30.7
Q ss_pred CCeEEEEEecCCCEEEEEcCCCcEEEEEcCCCCCcCe
Q psy10778 513 LPVIAVTYSCDSQHLYASNTEGLVIIWESSSHNRTPK 549 (556)
Q Consensus 513 ~~V~~l~~s~dg~~l~sgs~Dg~V~vwdl~~~~~~~~ 549 (556)
..+.+++..++..++++-+.|+++++|++.++.++.+
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 4556667788889999999999999999999876554
No 378
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=28.63 E-value=1.2e+02 Score=31.78 Aligned_cols=71 Identities=15% Similarity=0.205 Sum_probs=47.0
Q ss_pred CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC----eEEEEecC-CCCCCeE-EEEEecCCCEEEEEcCCCcEEE
Q psy10778 465 LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL----AHLLTLNT-NVALPVI-AVTYSCDSQHLYASNTEGLVII 538 (556)
Q Consensus 465 ~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~----~~~~~~~~-~h~~~V~-~l~~s~dg~~l~sgs~Dg~V~v 538 (556)
...++|+.....+. .++..|+.+|.|.-..+... ..+..+.. ....+|. .|.+++++..|++++.++.++|
T Consensus 400 ~~lT~vav~~~~~~---tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGY---SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTE---EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCe---EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45777776633333 78889999998765544321 23444432 2246785 8999999999999998765554
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=28.08 E-value=4.3e+02 Score=25.72 Aligned_cols=201 Identities=10% Similarity=0.138 Sum_probs=106.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEeeeccCccccccc--CCCeEeeC-CCccEEEEEEccCCCEEEEEcCCCcEEEE
Q psy10778 326 TIATATTAPDCHTLWLGLTSGNILVYEYELNASTNKIEFC--KPPTILLG-HSACVTDLYLCAGFSVAVSSSEDGTCLLW 402 (556)
Q Consensus 326 ~V~~i~~s~dg~~l~tgs~Dg~I~vwd~~~~~~~~~~~~~--~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs~Dg~I~iw 402 (556)
.+..++.+......+.-..||.|..|-.....+.+..... .....+.. ....|..|+.. ....+....||.|..|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 4555666666667777788999999976543211110000 00011111 12256666554 3345555679999999
Q ss_pred eCCCC----------e-EEEEeCCCCCCCCeeEEEEeCCCCeEEEEeecCcCCCCeEEEEEeC--Cc---------EE-E
Q psy10778 403 DINTI----------G-YIREIPCVDPNTPVSHVTMSETNGEIASVLQTTKTGGSILRLHTIN--AQ---------LI-T 459 (556)
Q Consensus 403 dl~~~----------~-~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~~~~~~d~~I~iwdi~--g~---------~i-~ 459 (556)
-.... . ....+.... ...|..++......+.++.. .++.|+.|-.+ |+ .. .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~-~~~v~~ia~G~g~~~t~~l~-----~~G~v~~wG~n~~GqLG~g~~~~~~~p~ 257 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQ-GHRVVDIACGSGDAQTLCLT-----DDDTVWSWGDGDYGKLGRGGSDGCKVPM 257 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGT-TSCEEEEEECCSSCEEEEEE-----TTTEEEEEECCGGGTTSSSSCCCEEEEE
T ss_pred CCCCCCCcCCCCCcccccceEecccC-CCeEEEEEEcCCCcEEEEEc-----cCCEEEEEeCCCCCCCCCCCCCCccccE
Confidence 65421 0 112222201 34566666644234445555 78999999654 22 11 1
Q ss_pred Eee--cCCCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCCCC-----------eEEEEecCCCCCCeEEEEEecCCCE
Q psy10778 460 SLA--SELRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGYKL-----------AHLLTLNTNVALPVIAVTYSCDSQH 526 (556)
Q Consensus 460 ~~~--~~~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~~~-----------~~~~~~~~~h~~~V~~l~~s~dg~~ 526 (556)
.+. ....|..++.. . ...+.-..+|.|+.|-.... .....+.......|..++.. ..+
T Consensus 258 ~v~~~~~~~v~~v~~G--~-----~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h 328 (389)
T 3kci_A 258 KIDSLTGLGVVKVECG--S-----QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLH 328 (389)
T ss_dssp ECGGGTTSCEEEEEEE--T-----TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSE
T ss_pred EecccCCCcEEEEeCC--C-----CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCe
Confidence 111 12346666655 2 24444567899999965321 11222221122456666654 445
Q ss_pred EEEEcCCCcEEEEEcCC
Q psy10778 527 LYASNTEGLVIIWESSS 543 (556)
Q Consensus 527 l~sgs~Dg~V~vwdl~~ 543 (556)
.++...||.|+.|=...
T Consensus 329 ~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 329 CVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEEETTCCEEEEECCT
T ss_pred EEEECCCCCEEEeeCCC
Confidence 66678899999998765
No 380
>2rod_B NOXA, noxaa; MCL-1, apoptosis, BH3-only, BCL-2, cytoplasm, developmental protein, differentiation, membrane, mitochondrion, nucleus, phosphoprotein; NMR {Mus musculus}
Probab=25.53 E-value=15 Score=20.37 Aligned_cols=6 Identities=67% Similarity=1.010 Sum_probs=2.6
Q ss_pred cccccc
Q psy10778 74 ELIPEL 79 (556)
Q Consensus 74 e~~pef 79 (556)
||.|||
T Consensus 2 elppef 7 (27)
T 2rod_B 2 ELPPEF 7 (27)
T ss_dssp CCCTHH
T ss_pred CCChHH
Confidence 444444
No 381
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=23.51 E-value=1.7e+02 Score=30.47 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=47.5
Q ss_pred CCeEEEEEeeCCCCCcceEEEEEeCCCeEEEEeCC-C--CeEEEEecCCCCCCe-EEEEEecCCCEEEEEcCCCcEEE
Q psy10778 465 LRITSVTFSNAPEGVSQNVIVTGHSDGTIQLWSGY-K--LAHLLTLNTNVALPV-IAVTYSCDSQHLYASNTEGLVII 538 (556)
Q Consensus 465 ~~i~~i~~s~~pdg~~~~~l~tg~~dg~I~iwd~~-~--~~~~~~~~~~h~~~V-~~l~~s~dg~~l~sgs~Dg~V~v 538 (556)
...++|+..... | ..++..|+.+|.|.-.-+. . ...+..+......+| ..|.++++...|++++.++.++|
T Consensus 387 ~~lT~IaVd~~~-g--~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 387 IQLTAVAVTMED-G--HTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CCEEEEEEEEET-T--EEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CceEEEEEEeec-C--eEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 457888877433 3 2688889999998754432 2 122333332345677 48999999999999998876665
No 382
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=22.58 E-value=3.2e+02 Score=28.82 Aligned_cols=63 Identities=13% Similarity=-0.027 Sum_probs=44.9
Q ss_pred ccEEEEEEccCCCEEEEEcC------------CCcEEEEeCCCCeEEEEeCCCCCCCCeeEEEEeCCCCeEEEEee
Q psy10778 376 ACVTDLYLCAGFSVAVSSSE------------DGTCLLWDINTIGYIREIPCVDPNTPVSHVTMSETNGEIASVLQ 439 (556)
Q Consensus 376 ~~V~~l~~s~~~~~l~sgs~------------Dg~I~iwdl~~~~~v~~l~~~h~~~~V~~l~~sp~~~~i~s~s~ 439 (556)
.....|.|.++|.+.+.... ...+..++..+++..+.+..+. ...++.++|+||++.|.+.-+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-GCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-TCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-CccccCCEECCCCCEEEEEEe
Confidence 34678999999987774322 1256667777787766665412 467999999999998887764
No 383
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.38 E-value=2.2e+02 Score=30.57 Aligned_cols=72 Identities=24% Similarity=0.336 Sum_probs=44.6
Q ss_pred CeEEEEEee--CCCCCcceEEEEEeCCCeEE-EEeCCCC-------eEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCC
Q psy10778 466 RITSVTFSN--APEGVSQNVIVTGHSDGTIQ-LWSGYKL-------AHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEG 534 (556)
Q Consensus 466 ~i~~i~~s~--~pdg~~~~~l~tg~~dg~I~-iwd~~~~-------~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg 534 (556)
..+.|+.+. ..+| ...++..|+.+|.|. +...... -.+..+.. ....+|..|.+++++..|++++.++
T Consensus 413 ~lT~IaVd~v~~~~g-~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~ 491 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDG-QYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 491 (667)
T ss_dssp CEEEEEEEEEECSSC-EEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceeEEEEEEEecCCC-cEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCE
Confidence 455665542 1333 135788899999875 3221111 12333332 3467899999999999999999887
Q ss_pred cEEE
Q psy10778 535 LVII 538 (556)
Q Consensus 535 ~V~v 538 (556)
.++|
T Consensus 492 V~kV 495 (667)
T 4gz8_A 492 VAQL 495 (667)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 384
>1w53_A Phosphoserine phosphatase RSBU; stress, kinase, hydrolase; 1.6A {Bacillus subtilis} SCOP: a.186.1.2
Probab=22.32 E-value=42 Score=25.48 Aligned_cols=17 Identities=29% Similarity=0.544 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHhhhhhh
Q psy10778 114 DPRTFIMVHRQSLESEL 130 (556)
Q Consensus 114 ~~~~f~~~~r~~les~~ 130 (556)
+|++.|.+||++++.=+
T Consensus 43 ~PEeiV~iHk~~i~el~ 59 (84)
T 1w53_A 43 PPEEIISIHRKVLKELY 59 (84)
T ss_dssp CHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 79999999999999854
No 385
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=21.35 E-value=2.8e+02 Score=29.22 Aligned_cols=73 Identities=15% Similarity=0.227 Sum_probs=45.4
Q ss_pred CeEEEEEee--CCCCCcceEEEEEeCCCeEEEEeCC-CC-----eEEEEecC-CCCCCeEEEEEecCCCEEEEEcCCCcE
Q psy10778 466 RITSVTFSN--APEGVSQNVIVTGHSDGTIQLWSGY-KL-----AHLLTLNT-NVALPVIAVTYSCDSQHLYASNTEGLV 536 (556)
Q Consensus 466 ~i~~i~~s~--~pdg~~~~~l~tg~~dg~I~iwd~~-~~-----~~~~~~~~-~h~~~V~~l~~s~dg~~l~sgs~Dg~V 536 (556)
..+.|+... ..+|....++..|+.+|.|.-.-.. .+ -.+..+.. ....+|..+.++++...|++++.++.+
T Consensus 363 ~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~ 442 (590)
T 3nvq_A 363 HYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVS 442 (590)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEE
T ss_pred cEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEE
Confidence 445555432 1344333678889999987643332 22 12333432 245789999999999999999888766
Q ss_pred EE
Q psy10778 537 II 538 (556)
Q Consensus 537 ~v 538 (556)
+|
T Consensus 443 qV 444 (590)
T 3nvq_A 443 QV 444 (590)
T ss_dssp EE
T ss_pred Ec
Confidence 55
No 386
>1p4q_A CBP/P300-interacting transactivator 2; helix, protein-protein complex, transcription/transferase complex; NMR {Homo sapiens} SCOP: j.96.1.1
Probab=21.31 E-value=29 Score=22.99 Aligned_cols=13 Identities=31% Similarity=0.790 Sum_probs=10.4
Q ss_pred cCcceecCCCCCc
Q psy10778 82 LADILVNNEGFDF 94 (556)
Q Consensus 82 ~~~~~~n~~~~~~ 94 (556)
+||.|.-.|.|+|
T Consensus 36 LPEL~LgqnEfdf 48 (52)
T 1p4q_A 36 LPELWLGQNEFDF 48 (52)
T ss_dssp CCCCCSCCSTTGG
T ss_pred hHHHHhCcchhhh
Confidence 4788888888876
Done!