BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1078
(199 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 124/136 (91%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+KKLSEQEL +G+KTSWHDQY+DSAW+F+GGLP+DL+EGD+ICIFSQYGE+
Sbjct: 1 MNPLTNMKNVKKLSEQELYTGNKTSWHDQYRDSAWVFIGGLPFDLTEGDIICIFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RDK +GKSKGFCF+CYEDQRST L+VDN NG+K+L+RTIRVDHV++YK PK K
Sbjct: 61 VNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNFNGIKILNRTIRVDHVSNYKVPKQGK 120
Query: 121 YTDEETKKLRTIGCAP 136
TD ETKKL GCAP
Sbjct: 121 KTDAETKKLYDEGCAP 136
>gi|347964873|ref|XP_309173.5| AGAP000977-PA [Anopheles gambiae str. PEST]
gi|333466517|gb|EAA04971.6| AGAP000977-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 132/168 (78%), Gaps = 10/168 (5%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TN+KN+ KLSEQ+L G K+SWHDQYK SAWIFVGGLPYDL+EGDV+C+FSQYGEI
Sbjct: 1 MNPMTNMKNVTKLSEQDLKLGGKSSWHDQYKSSAWIFVGGLPYDLTEGDVLCVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK TGKSKGF FICYEDQRSTVL+VDNLNG+K++ +T+RVDHV DY+PPK+
Sbjct: 61 VNVNLVRDKATGKSKGFAFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKETD 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKKRK 168
TD+ET++L GCAP K E + EK PT +K+ K
Sbjct: 121 KTDDETRQLYMEGCAP----------KAEHPRPEKQKDPTVKSEKRHK 158
>gi|312379149|gb|EFR25518.1| hypothetical protein AND_09071 [Anopheles darlingi]
Length = 232
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 137/176 (77%), Gaps = 7/176 (3%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
L N+KN++KLS+Q+L G K SWHDQY+DSAWIFVGGLPYDL+EGDVIC+FSQYGEIVN+
Sbjct: 64 LRNMKNVQKLSDQDLKLGGKNSWHDQYRDSAWIFVGGLPYDLTEGDVICVFSQYGEIVNI 123
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
NLVRDK +GKSKGFCFICYEDQRSTVL+VDNLNG+K++ +T+RVDHV DY+PPK+N+ TD
Sbjct: 124 NLVRDKTSGKSKGFCFICYEDQRSTVLAVDNLNGIKLVGKTLRVDHVQDYRPPKENENTD 183
Query: 124 EETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKKRKHKEKKVKKEKK 179
ETK+L GCAP + K E D+K + S HKE+ KKEK+
Sbjct: 184 AETKQLYMEGCAPEVQS-QSSTKSKTSSKTESDTKRSHS------HKERSSKKEKR 232
>gi|194879282|ref|XP_001974209.1| GG21207 [Drosophila erecta]
gi|190657396|gb|EDV54609.1| GG21207 [Drosophila erecta]
Length = 154
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 7/158 (4%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL G K SWHD YKDSAWIFV G PY L+EGD++C+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDIVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K+L RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSK 158
DEET +L GCAP + I KTE +KDSK
Sbjct: 121 KMDEETLRLYMEGCAPKPQLQHI---KTE----KKDSK 151
>gi|195484576|ref|XP_002090750.1| GE13281 [Drosophila yakuba]
gi|194176851|gb|EDW90462.1| GE13281 [Drosophila yakuba]
Length = 154
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 100/143 (69%), Positives = 119/143 (83%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL +G K SWHD YKDSAWIFV G PY L+EGD++C+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQNGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K+L RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSI 143
DEET +L GCAP + I
Sbjct: 121 RMDEETLRLYMEGCAPKPQLQHI 143
>gi|195345201|ref|XP_002039161.1| GM17378 [Drosophila sechellia]
gi|194134291|gb|EDW55807.1| GM17378 [Drosophila sechellia]
Length = 154
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 7/158 (4%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL G K SWHD YKDSAWIFV G PY L+EGD++C+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K+L RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSK 158
DEET +L GCAP + I KTE +KDSK
Sbjct: 121 KMDEETLRLYMEGCAPKPQLQHI---KTE----KKDSK 151
>gi|195580271|ref|XP_002079976.1| GD24233 [Drosophila simulans]
gi|194191985|gb|EDX05561.1| GD24233 [Drosophila simulans]
Length = 155
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 7/158 (4%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL G K SWHD YKDSAWIFV G PY L+EGD++C+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K+L RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSK 158
DEET +L GCAP + I KTE +KDSK
Sbjct: 121 KMDEETLRLYMEGCAPKPQLQHI---KTE----KKDSK 151
>gi|20129641|ref|NP_610003.1| CG10466, isoform A [Drosophila melanogaster]
gi|442628478|ref|NP_001260601.1| CG10466, isoform B [Drosophila melanogaster]
gi|7298629|gb|AAF53845.1| CG10466, isoform A [Drosophila melanogaster]
gi|440213961|gb|AGB93136.1| CG10466, isoform B [Drosophila melanogaster]
Length = 154
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/158 (67%), Positives = 126/158 (79%), Gaps = 7/158 (4%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL G K SWHD YKDSAWIFV G PY L+EGD++C+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K+L RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSK 158
DEET +L GCAP + I KTE +KDSK
Sbjct: 121 KMDEETLRLYMEGCAPKPQLQHI---KTE----KKDSK 151
>gi|195156397|ref|XP_002019086.1| GL26176 [Drosophila persimilis]
gi|194115239|gb|EDW37282.1| GL26176 [Drosophila persimilis]
Length = 158
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 124/150 (82%), Gaps = 4/150 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
MNPLTN+KN+ KLSEQ+L G K SWHD Y+DSAWIFV G PY+LSEGD+IC+FSQYGE
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGKKSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
+VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPK+N
Sbjct: 61 VVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKEN 120
Query: 120 KYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
+ DEET +L GCAP + G VKTE
Sbjct: 121 EKMDEETLRLYMEGCAPRPQMGD---VKTE 147
>gi|125983973|ref|XP_001355751.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
gi|54644068|gb|EAL32810.1| GA10331 [Drosophila pseudoobscura pseudoobscura]
Length = 157
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 124/150 (82%), Gaps = 4/150 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
MNPLTN+KN+ KLSEQ+L G K SWHD Y+DSAWIFV G PY+LSEGD+IC+FSQYGE
Sbjct: 1 MNPLTNMKNVLKLSEQDLKQGVGKKSWHDMYRDSAWIFVAGFPYNLSEGDIICVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
+VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPK+N
Sbjct: 61 VVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKEN 120
Query: 120 KYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
+ DEET +L GCAP + G VKTE
Sbjct: 121 EKMDEETLRLYMEGCAPRPQMGD---VKTE 147
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 119/136 (87%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTNVKNIKKL EQEL S TSWHDQY DSAWIF+GGLPYDL+EGDVI +FSQYGE+
Sbjct: 1 MNPLTNVKNIKKLGEQELVSNRSTSWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RDK TGK KG+ F+CYE+Q+STVL+VDNLNG+K+L RTIRVDHV +YK PKD+K
Sbjct: 61 VNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRTIRVDHVANYKAPKDSK 120
Query: 121 YTDEETKKLRTIGCAP 136
DEETK+LR GCAP
Sbjct: 121 NVDEETKRLRKEGCAP 136
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 118/136 (86%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTNVKNIKKL EQEL + K SWHDQYKDSAWIF+GGLPYDL+EGDV+ IFSQYGE+
Sbjct: 1 MNPLTNVKNIKKLGEQELLTDRKVSWHDQYKDSAWIFIGGLPYDLTEGDVVTIFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RDK TGK KG+ F+CYEDQRST+L+VDN NG K+L RTIRVDHV +YK PKD+K
Sbjct: 61 VNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGTKILGRTIRVDHVANYKAPKDSK 120
Query: 121 YTDEETKKLRTIGCAP 136
DEETK+LR GCAP
Sbjct: 121 NIDEETKRLRKEGCAP 136
>gi|194760456|ref|XP_001962456.1| GF14433 [Drosophila ananassae]
gi|190616153|gb|EDV31677.1| GF14433 [Drosophila ananassae]
Length = 155
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/143 (69%), Positives = 118/143 (82%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN+KN+ KLSE EL G K SWHD Y+DSAWIFV G PY L+EGD+IC+FSQYGE+
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGGKKSWHDMYRDSAWIFVAGFPYTLTEGDLICVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPK+N+
Sbjct: 61 VNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKENE 120
Query: 121 YTDEETKKLRTIGCAPGTEFGSI 143
DEET +L GCAP + I
Sbjct: 121 KMDEETLRLYMEGCAPKPQLQHI 143
>gi|195433960|ref|XP_002064974.1| GK14925 [Drosophila willistoni]
gi|194161059|gb|EDW75960.1| GK14925 [Drosophila willistoni]
Length = 158
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 103/150 (68%), Positives = 126/150 (84%), Gaps = 4/150 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS-KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
MNPLTN+KN+ KLSE EL G+ K SWHD Y+DSAWIFVGG PY L+EGD++C+FSQYGE
Sbjct: 1 MNPLTNMKNVLKLSEHELQHGAGKKSWHDMYRDSAWIFVGGFPYTLTEGDLVCVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
+VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+++ RT+RVDHV+DYKPPK+N
Sbjct: 61 VVNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIQITGRTLRVDHVSDYKPPKEN 120
Query: 120 KYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
+ TDEET +L GCAP + I+ +KTE
Sbjct: 121 EKTDEETLRLYMEGCAPKPQ---IINIKTE 147
>gi|195118872|ref|XP_002003957.1| GI20215 [Drosophila mojavensis]
gi|195137572|ref|XP_002012574.1| GI11259 [Drosophila mojavensis]
gi|193906408|gb|EDW05275.1| GI11259 [Drosophila mojavensis]
gi|193914532|gb|EDW13399.1| GI20215 [Drosophila mojavensis]
Length = 183
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/136 (72%), Positives = 116/136 (85%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN++N+ KLSEQEL + S SWHD Y+DSAWIF+ G PY LSEGD+IC+FSQYGE+
Sbjct: 1 MNPLTNMRNVLKLSEQELKNPSGKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPKDN+
Sbjct: 61 VNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKDNE 120
Query: 121 YTDEETKKLRTIGCAP 136
DEET L GCAP
Sbjct: 121 KLDEETLLLYMEGCAP 136
>gi|195384987|ref|XP_002051191.1| GJ13600 [Drosophila virilis]
gi|194147648|gb|EDW63346.1| GJ13600 [Drosophila virilis]
Length = 181
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/136 (72%), Positives = 115/136 (84%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN++N+ KLSE EL + S SWHD Y+DSAWIF+ G PY LSEGD+IC+FSQYGEI
Sbjct: 1 MNPLTNMRNVLKLSELELKNPSAKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPKDN
Sbjct: 61 VNINLVRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKDND 120
Query: 121 YTDEETKKLRTIGCAP 136
DEET +L GCAP
Sbjct: 121 KLDEETLRLYMEGCAP 136
>gi|157129340|ref|XP_001655377.1| RNA-binding protein, putative [Aedes aegypti]
gi|108882112|gb|EAT46337.1| AAEL002461-PA [Aedes aegypti]
Length = 138
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 122/136 (89%), Gaps = 1/136 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TN+KN+ KLSEQ+L+ G K SWHDQYKDSAWIFVGGLP +L+EGD++ +FSQYGEI
Sbjct: 1 MNPMTNMKNVLKLSEQDLNYGGKNSWHDQYKDSAWIFVGGLPSELTEGDLLAVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK TGKSKGF FIC+EDQRSTVL+VDN+NG+K+L RT+RVDHV+DYKPPKD+K
Sbjct: 61 VNINLVRDKKTGKSKGFSFICFEDQRSTVLTVDNMNGIKLLGRTLRVDHVSDYKPPKDDK 120
Query: 121 YTDEETKKLRTIGCAP 136
DEETK+L GCAP
Sbjct: 121 -ADEETKRLYMEGCAP 135
>gi|195053126|ref|XP_001993480.1| GH13830 [Drosophila grimshawi]
gi|193900539|gb|EDV99405.1| GH13830 [Drosophila grimshawi]
Length = 180
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 116/136 (85%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN++N+ KLSE EL + S SWHD Y+DSAWIFV G PY LSEGD++C+FSQYGE+
Sbjct: 1 MNPLTNMRNVLKLSELELKTPSAKSWHDMYRDSAWIFVAGFPYTLSEGDLVCVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPKDN+
Sbjct: 61 VNINLVRDGKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIMERTLRVDHVLDYKPPKDNE 120
Query: 121 YTDEETKKLRTIGCAP 136
DEET +L GCAP
Sbjct: 121 KLDEETLRLYMEGCAP 136
>gi|340727255|ref|XP_003401963.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
terrestris]
Length = 139
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/136 (74%), Positives = 117/136 (86%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTNVKNIKKL EQEL S SWHDQY DSAWIF+GGLPYDL+EGDVI +FSQYGE+
Sbjct: 1 MNPLTNVKNIKKLGEQELVSNRSISWHDQYGDSAWIFIGGLPYDLTEGDVITVFSQYGEV 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NL+RDK TGK KG+ F+CYE+Q+STVL+VDNLNG+K+L R IRVDHV +YK PKD+K
Sbjct: 61 VNINLIRDKNTGKQKGYGFLCYENQKSTVLAVDNLNGIKILGRIIRVDHVANYKAPKDSK 120
Query: 121 YTDEETKKLRTIGCAP 136
DEETK+LR GCAP
Sbjct: 121 NVDEETKRLRKEGCAP 136
>gi|156543304|ref|XP_001603981.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Nasonia
vitripennis]
Length = 139
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 117/137 (85%), Gaps = 1/137 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TNVKNI KL QEL S K SWHD YKDSAWIF+GGLPYDL+EGDVI +FSQYGEI
Sbjct: 1 MNPMTNVKNIAKLGLQELGSDRKGSWHDDYKDSAWIFIGGLPYDLTEGDVIAVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK-DN 119
VN+NLVRDK TGK KG+ F+CYEDQRST+L+VDNLNG+K+L RTIRVDHV DYKPPK +
Sbjct: 61 VNINLVRDKDTGKQKGYGFLCYEDQRSTILAVDNLNGIKILGRTIRVDHVKDYKPPKVGS 120
Query: 120 KYTDEETKKLRTIGCAP 136
K DEETK+LR GCAP
Sbjct: 121 KNVDEETKRLRLEGCAP 137
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/136 (73%), Positives = 121/136 (88%), Gaps = 1/136 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TN+KN+ KLSEQ+L G K SWHDQY+DSAWIFVGGLP +L+EGD++ +FSQYGEI
Sbjct: 1 MNPMTNMKNVLKLSEQDLKFGGKNSWHDQYRDSAWIFVGGLPSELTEGDLLAVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRD+ TGKSKGF FIC+EDQRSTVL+VDNLNG+K+L RT+RVDHV+DYKPPKD+K
Sbjct: 61 VNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNLNGIKLLGRTLRVDHVSDYKPPKDDK 120
Query: 121 YTDEETKKLRTIGCAP 136
DEET++L GCAP
Sbjct: 121 -ADEETRRLYMEGCAP 135
>gi|357611289|gb|EHJ67406.1| RNA binding motif protein X-linked 2 [Danaus plexippus]
Length = 185
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TNVKN+ KLSE+EL+ SK+SWHDQYKDSAWIFVGGLPYDL+EGDVIC+FSQYGEI
Sbjct: 1 MNPMTNVKNVLKLSERELTGNSKSSWHDQYKDSAWIFVGGLPYDLTEGDVICVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP-KDN 119
VN+NLVRDK TG+SKGF FICYEDQRST+L+VDNLN +K+L RTIRVDH Y+ P D
Sbjct: 61 VNINLVRDKDTGRSKGFAFICYEDQRSTILAVDNLNSIKILGRTIRVDHCEQYRAPNADM 120
Query: 120 KYTDEETKKLRTIGCAPG 137
DE T +RT GCAP
Sbjct: 121 SKIDEVTAAIRTEGCAPA 138
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 123/160 (76%), Gaps = 9/160 (5%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLTNVKNI KL+E EL G KTSWH +YKDSAWIF+GGL Y L+EGDVIC+FSQYG
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+VN+NL+RDK TGKSKG+CF+CYEDQRSTVLSVDNLNG+ + RTIRVDHV +Y+PPKD
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISLCKRTIRVDHVENYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSK 158
++ D KL GCAP T V ++ K E DS+
Sbjct: 121 SEDLDALMAKLHREGCAPET-------VARDEHKSEDDSE 153
>gi|112983436|ref|NP_001037638.1| RNA binding motif protein X-linked 2 [Bombyx mori]
gi|109706821|gb|ABG42997.1| RNA binding motif protein X-linked 2 [Bombyx mori]
Length = 181
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 120/154 (77%), Gaps = 3/154 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TNVKN+ KLSE EL S SKTSWHDQYKDSAWIFVGGLPYD +EGDVIC+FSQYGEI
Sbjct: 1 MNPMTNVKNVLKLSEHELGSSSKTSWHDQYKDSAWIFVGGLPYDWTEGDVICVFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+N+VRDK TGK KGF F+CYEDQRST+L+VDNLN +K+L RT+RVDH YK P +
Sbjct: 61 VNINMVRDKTTGKPKGFAFLCYEDQRSTILAVDNLNSIKILGRTLRVDHCEQYKVPNAHM 120
Query: 121 Y-TDEETKKLRTIGCAPGTEFGSILPVKTEDIKQ 153
DE T +R GCAP I VK E++KQ
Sbjct: 121 SKIDEVTAAIRMEGCAPVAP--KIEIVKKENVKQ 152
>gi|332026997|gb|EGI67093.1| RNA-binding motif protein, X-linked 2 [Acromyrmex echinatior]
Length = 172
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 115/132 (87%)
Query: 5 TNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
NVKNIKKL+EQEL +K+SWHDQYKDSAWIFVGGLPY+L+EGDVI IFSQYGE+VN+N
Sbjct: 38 ANVKNIKKLNEQELQGKNKSSWHDQYKDSAWIFVGGLPYNLTEGDVIAIFSQYGEVVNIN 97
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
L+RDK TGK KG+ F+CYEDQRST+L+VDN NG+K+L R IRVDHV++YK PKD+K DE
Sbjct: 98 LIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVSNYKAPKDSKNIDE 157
Query: 125 ETKKLRTIGCAP 136
ET+ LR GCAP
Sbjct: 158 ETRNLRKEGCAP 169
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 96/145 (66%), Positives = 120/145 (82%), Gaps = 2/145 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSI 143
++ DEET+KL+ GC T S+
Sbjct: 121 SEEVDEETRKLQESGCGAHTPSPSL 145
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E S G SWH +YKDSAWIFVGG PY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREASLGVNESVSWHSEYKDSAWIFVGGFPYELTEGDLICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCFICYEDQRST+L+VDN NG+K+ RTIRVDHV DY+PPKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAP 136
+ D+ TK LR GCAP
Sbjct: 121 GEDIDDVTKHLREEGCAP 138
>gi|321474055|gb|EFX85021.1| hypothetical protein DAPPUDRAFT_194198 [Daphnia pulex]
Length = 247
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 113/138 (81%), Gaps = 2/138 (1%)
Query: 1 MNPLTNVKNIKKLSEQEL--SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLTNVKNIKKLSE EL + K SWH QYKDSAWIF+GGLPY+LSEGD+ICIFSQYG
Sbjct: 1 MNPLTNVKNIKKLSETELKYNISGKASWHYQYKDSAWIFIGGLPYELSEGDIICIFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+ N+NLVRDK+TGKSKGFCF+CYEDQRST+L+VDNLN +KV RT+RVDHV YK PKD
Sbjct: 61 EVANINLVRDKVTGKSKGFCFLCYEDQRSTILAVDNLNSIKVCGRTLRVDHVEQYKIPKD 120
Query: 119 NKYTDEETKKLRTIGCAP 136
DE+ ++ GC P
Sbjct: 121 PDKLDEDALRILQEGCGP 138
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 118/140 (84%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ TD+ TK+L+ GC T
Sbjct: 121 SEETDDVTKELQERGCGAHT 140
>gi|328698189|ref|XP_001949636.2| PREDICTED: hypothetical protein LOC100169481 [Acyrthosiphon pisum]
Length = 297
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 111/131 (84%), Gaps = 4/131 (3%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLTN++N+KKLSEQEL K+SWHD+YK SAWIFVGGLPYDLSEGD++ IFSQYGEI
Sbjct: 1 MNPLTNMRNVKKLSEQELQRLPKSSWHDEYKSSAWIFVGGLPYDLSEGDIMSIFSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
NLNLVRDK TGK KGFCF+CYEDQRST+L+VDN NG +VL R +RVDHV DYKPPK++
Sbjct: 61 TNLNLVRDKDTGKQKGFCFVCYEDQRSTILAVDNFNGTRVLGRILRVDHVKDYKPPKNS- 119
Query: 121 YTDEETKKLRT 131
E T K++T
Sbjct: 120 ---EPTTKIKT 127
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/135 (69%), Positives = 115/135 (85%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ NV IKKLS+QELSSGS SWHDQY DSAW+FVGGLPY+L+EGDV+C+FSQYGEIVN+
Sbjct: 5 MYNVNAIKKLSDQELSSGSGKSWHDQYSDSAWVFVGGLPYELTEGDVLCVFSQYGEIVNI 64
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
N+VRDK TGK KGF FICYE+Q+STVL+VDN NGVK+ RTIRVDHV++Y+ PK+++ D
Sbjct: 65 NMVRDKKTGKPKGFAFICYENQKSTVLAVDNFNGVKIKGRTIRVDHVSNYRVPKEHEEDD 124
Query: 124 EETKKLRTIGCAPGT 138
+ TKK+R G AP T
Sbjct: 125 DITKKIRQEGVAPRT 139
>gi|195137574|ref|XP_002012575.1| GI11260 [Drosophila mojavensis]
gi|193906409|gb|EDW05276.1| GI11260 [Drosophila mojavensis]
Length = 177
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 110/130 (84%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
++N+ KLSEQEL + S SWHD Y+DSAWIF+ G PY LSEGD+IC+FSQYGE+VN+NLV
Sbjct: 1 MRNVLKLSEQELKNPSGKSWHDMYRDSAWIFIAGFPYTLSEGDIICVFSQYGEVVNINLV 60
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEET 126
RD TGKSKGFCF+CYEDQRSTVL+VDNLNG+K++ RT+RVDHV DYKPPKDN+ DEET
Sbjct: 61 RDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKIIDRTLRVDHVADYKPPKDNEKLDEET 120
Query: 127 KKLRTIGCAP 136
L GCAP
Sbjct: 121 LLLYMEGCAP 130
>gi|242025632|ref|XP_002433228.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
gi|212518769|gb|EEB20490.1| U2 snRNP component IST3, putative [Pediculus humanus corporis]
Length = 121
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/120 (79%), Positives = 111/120 (92%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNP+TNVKNIKKLSE+EL KTSWH+QYKDSAW+FVGGLPYDL+EGD+IC+FSQ+GE
Sbjct: 1 MNPMTNVKNIKKLSEEELKGRYKTSWHEQYKDSAWVFVGGLPYDLTEGDIICVFSQFGEP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK +GKS+GFCF+CYEDQRST L+VDNLNGVK+L RTIRVDHV +YKPPK+NK
Sbjct: 61 VNINLVRDKDSGKSRGFCFLCYEDQRSTNLAVDNLNGVKILGRTIRVDHVENYKPPKNNK 120
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/136 (69%), Positives = 113/136 (83%), Gaps = 2/136 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E G K SWH +YKDSAW+F+GG PY+LSEGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV DY+PPKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVKDYRPPKD 120
Query: 119 NKYTDEETKKLRTIGC 134
++ D+ TK LR GC
Sbjct: 121 SEDIDDVTKILREEGC 136
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 115/138 (83%), Gaps = 2/138 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E L K SWH +Y+DSAWIFVGG PY+L+EGD++C+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREADLGVNEKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCFICYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EIVNVNLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVKNYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAP 136
+ D+ TK+LR GCAP
Sbjct: 121 GEDIDDVTKRLREDGCAP 138
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 118/140 (84%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH++YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 21 MNPLTKVKLINELNEREVELGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P+D
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 140
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ DE T++L+ GC T
Sbjct: 141 SEEMDEVTRELQERGCGTHT 160
>gi|380025295|ref|XP_003696412.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Apis florea]
Length = 135
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 112/129 (86%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
KNI+KL EQEL KTSWHDQYK+SAWIF+GGLPYDL+EGDVI +FSQ+GE+VN+NL+R
Sbjct: 5 KNIQKLGEQELLGDRKTSWHDQYKNSAWIFIGGLPYDLTEGDVITVFSQFGEVVNINLIR 64
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETK 127
DK TGK KG+ F+CYEDQRST+L+VDN NG K+L RTIRVDHV++YK PKD+K DEETK
Sbjct: 65 DKDTGKQKGYGFLCYEDQRSTILAVDNFNGTKILGRTIRVDHVSNYKAPKDSKNIDEETK 124
Query: 128 KLRTIGCAP 136
KLR GCAP
Sbjct: 125 KLRKEGCAP 133
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/145 (64%), Positives = 119/145 (82%), Gaps = 2/145 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSI 143
++ D+ T++L+ GC T S+
Sbjct: 141 SEEMDDVTRELQEKGCGARTPSPSL 165
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 95/137 (69%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E G K SWH +Y DSAW+FVGGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREAQLGVQDKVSWHSEYNDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCFICYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCA 135
++ DE TK LR GC
Sbjct: 121 SEDIDEVTKTLREKGCG 137
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 10 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 69
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 70 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 129
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ D+ TK+L+ GC T
Sbjct: 130 LEEIDDMTKELQEKGCGAHT 149
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 121/151 (80%), Gaps = 6/151 (3%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
++ D+ T++L+ GC T LP +E
Sbjct: 141 SEEMDDVTRELQDEGCGAHT----TLPNSSE 167
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 124/162 (76%), Gaps = 9/162 (5%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 21 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 80
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 81 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 140
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPT 160
++ D+ +++L+ GC T S+ K D KPT
Sbjct: 141 SEEMDDVSRELQEKGCGARTPSPSL-------SKSSADEKPT 175
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ D+ TK+L+ GC T
Sbjct: 121 LEEIDDMTKELQEKGCGAHT 140
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGART 140
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ TK+L+ GC T
Sbjct: 121 SEEMDDVTKELQEKGCGAHT 140
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEIDDVTRQLQEKGCGART 140
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGAHT 140
>gi|339247525|ref|XP_003375396.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
gi|316971276|gb|EFV55078.1| RNA-binding motif protein, X-linked 2 [Trichinella spiralis]
Length = 287
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 123/164 (75%), Gaps = 9/164 (5%)
Query: 5 TNVKNIKKLSEQELSSG----SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
NVKN+ K++E+EL G S SWH +YKDSAWIF+GGLP+ LSEGD+IC+FSQYGE+
Sbjct: 22 INVKNLNKINERELHLGLAGKSDRSWHQKYKDSAWIFIGGLPFQLSEGDIICVFSQYGEV 81
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V LNL+RDK TGKS+GFCF+CYEDQRSTVL+VDN NG+K+L R IRVDHV +Y+ PK+
Sbjct: 82 VQLNLIRDKKTGKSRGFCFLCYEDQRSTVLAVDNFNGIKLLGRIIRVDHVENYRVPKERG 141
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQE--KDSKPTES 162
DE TKKL GCAP T F PVK +K+E +D P E+
Sbjct: 142 DEDEITKKLWLEGCAPSTSFA---PVKEVPVKEEHSEDDFPEEA 182
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGART 140
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEIDDVTRQLQEKGCGART 140
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGART 140
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGART 140
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 118/140 (84%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 8 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 67
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 68 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 127
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ TD+ TK+L+ GC T
Sbjct: 128 SEETDDVTKELQEKGCGART 147
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 117/137 (85%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH++YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 99 MNPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 158
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ P+D
Sbjct: 159 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLPED 218
Query: 119 NKYTDEETKKLRTIGCA 135
++ DE T++L+ GC
Sbjct: 219 SEEMDEVTRELQERGCG 235
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 114/140 (81%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+ +E S G K SWH YKDSAWIF+GGLP++L+EGDVIC+FSQYG
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWIFIGGLPFELTEGDVICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+VN+NL RDK +G+S+GFCF+C+EDQRSTVL+VDNLNG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EVVNINLARDKSSGRSRGFCFVCFEDQRSTVLAVDNLNGIKLKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ DE T+ LR GCA T
Sbjct: 121 AEDIDEITQTLREKGCAART 140
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 114/140 (81%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+ +E S G K SWH YKDSAW+F+GGLPY+LSEGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+VN+NLVRDK +G+S+GFCF+C+EDQRSTVL+VDNLNG+KV RTIRVDHV +Y+PPKD
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ DE T+ LR GC T
Sbjct: 121 AEDIDEITQSLREKGCGART 140
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGDVIC+FSQYG
Sbjct: 53 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYG 112
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PK+
Sbjct: 113 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKE 172
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ D+ T++L+ GC T
Sbjct: 173 SDEMDDVTRQLQEKGCGAHT 192
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 116/137 (84%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAW+F+GGLPY+L+EGD+IC+FSQYG
Sbjct: 75 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWVFLGGLPYELTEGDIICVFSQYG 134
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+VN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 135 EVVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKD 194
Query: 119 NKYTDEETKKLRTIGCA 135
++ D+ T++L+ GC
Sbjct: 195 SEELDDVTRELQEKGCG 211
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 114/140 (81%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+ +E S G K SWH YKDSAW+F+GGLPY+LSEGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+VN+NLVRDK +G+S+GFCF+C+EDQRSTVL+VDNLNG+KV RTIRVDHV +Y+PPKD
Sbjct: 61 EVVNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ DE T+ LR GC T
Sbjct: 121 AEDIDEITQSLREKGCGART 140
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEMDDVTRQLQEKGCGART 140
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YK SAWIFVGGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 119 NKYTDEETKKLRTIGCA 135
++ D+ T++L+ GC
Sbjct: 121 SEDVDDVTRELQEKGCG 137
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEIDDVTRQLQEKGCGART 140
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH++YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLV DK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P+D
Sbjct: 61 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ DE T++L+ GC T
Sbjct: 121 SEEMDEVTRELQERGCGTHT 140
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ +K L+ GC T
Sbjct: 121 SEEMDDVSKGLQEKGCGART 140
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV +Y+ P++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEDVDDVTRELQEKGCGAKT 140
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 116/138 (84%), Gaps = 2/138 (1%)
Query: 3 PLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
PLTNVKNI KL+E E G S SWH QYKDSA+IF+GG+P++L+EGDV+C+FSQYGEI
Sbjct: 29 PLTNVKNINKLNELEAQYGVSSTASWHQQYKDSAYIFIGGMPFELTEGDVLCVFSQYGEI 88
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK TGKSKG+CFI YEDQRST+L+VDN NG+K+ RT+RVDHV++Y+ PKD++
Sbjct: 89 VNINLVRDKKTGKSKGYCFIAYEDQRSTILAVDNFNGIKLKGRTLRVDHVSEYRKPKDDE 148
Query: 121 YTDEETKKLRTIGCAPGT 138
D+ TKKLR GCAP T
Sbjct: 149 ELDDATKKLREEGCAPKT 166
>gi|344276873|ref|XP_003410230.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 303
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 115/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSE--QELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK IK+LSE E S ++ SWH QYKDS+WIF+GGLPY+L+EGD++C+FSQYG
Sbjct: 1 MNPLTKVKQIKQLSELEAEHSVVAEASWHSQYKDSSWIFLGGLPYELTEGDILCVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVR++ TGKSKGFCFICYEDQRSTVL+VDN NG+K+ RTIRVDHV+ Y+PP+
Sbjct: 61 EIVNINLVRNRKTGKSKGFCFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSSYRPPRA 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L GC T
Sbjct: 121 SEDVDDMTRELWEKGCGAQT 140
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 116/139 (83%), Gaps = 2/139 (1%)
Query: 2 NPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
+PLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYGE
Sbjct: 183 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 242
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
IVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ PKD+
Sbjct: 243 IVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 302
Query: 120 KYTDEETKKLRTIGCAPGT 138
+ D+ TK+L+ GC T
Sbjct: 303 EEMDDMTKELQEKGCGAFT 321
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEIDDVTRQLQEKGCGART 140
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D+ T++L+ GC T
Sbjct: 121 SEEIDDVTRQLQEKGCGART 140
>gi|391339259|ref|XP_003743969.1| PREDICTED: uncharacterized protein LOC100902788 [Metaseiulus
occidentalis]
Length = 322
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 115/139 (82%), Gaps = 3/139 (2%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNPLTNV+N++K++++EL +G + SWH +YK+SAWI+ GG+ +DL+EGD++CIFSQY
Sbjct: 1 MNPLTNVRNLQKINDRELQMGLTGHEKSWHSKYKNSAWIYFGGVSFDLTEGDLLCIFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GEIVN+NLVRDK TGKS+GF FICYEDQRST+L++DN NG K+ +RT RVDHV +YKPPK
Sbjct: 61 GEIVNINLVRDKETGKSRGFGFICYEDQRSTILAIDNFNGAKICNRTFRVDHVENYKPPK 120
Query: 118 DNKYTDEETKKLRTIGCAP 136
D+ DE TK L GCAP
Sbjct: 121 DSDEYDELTKMLHEKGCAP 139
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 116/139 (83%), Gaps = 2/139 (1%)
Query: 2 NPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
+PLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYGE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
IVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD+
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 120 KYTDEETKKLRTIGCAPGT 138
+ D+ T++L+ GC T
Sbjct: 121 EEIDDVTRQLQEKGCGART 139
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
+PLT VK I +L+E+E+ G K SWH++YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 88 FSPLTKVKLINELNEREVQLGVPEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYG 147
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLV DK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P+D
Sbjct: 148 EIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRLPED 207
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ DE T++L+ GC T
Sbjct: 208 SEEMDEVTRELQERGCGTHT 227
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 116/139 (83%), Gaps = 2/139 (1%)
Query: 2 NPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
+PLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYGE
Sbjct: 1 SPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
IVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD+
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDS 120
Query: 120 KYTDEETKKLRTIGCAPGT 138
+ D+ T++L+ GC T
Sbjct: 121 EEMDDVTRQLQEKGCGART 139
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 115/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVADTVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PK+
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRTPKE 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ D TK+L+ GC T
Sbjct: 121 SEEMDIVTKELQEKGCGAHT 140
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 112/138 (81%), Gaps = 2/138 (1%)
Query: 3 PLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
PLT VK I +L+ +E S G K SWH YKDSAW+F+GGLPY+LSEGD+IC+FSQYGE+
Sbjct: 14 PLTKVKLINELNAREASLGVKDSVSWHQDYKDSAWLFIGGLPYELSEGDIICVFSQYGEV 73
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK +G+S+GFCF+C+EDQRSTVL+VDNLNG+KV RTIRVDHV +Y+PPKD +
Sbjct: 74 VNINLVRDKSSGRSRGFCFLCFEDQRSTVLAVDNLNGIKVKGRTIRVDHVANYRPPKDAE 133
Query: 121 YTDEETKKLRTIGCAPGT 138
DE T+ LR GC T
Sbjct: 134 DIDEITQSLREKGCGART 151
>gi|291400895|ref|XP_002716702.1| PREDICTED: RNA binding motif protein, X-linked 2 [Oryctolagus
cuniculus]
Length = 198
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSS-GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
MNPLT VK +++LSE+E K SWH Y+DSAW+FVGGLPY+L+EGD++C+FSQYGE
Sbjct: 1 MNPLTKVKLVRELSEREAGMVPPKVSWHSMYRDSAWVFVGGLPYELTEGDILCVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
IVN++LVRDK TGKS+GF FICYEDQRSTVL+VDN NG+K+ RTIRVDH ++Y+PP+D+
Sbjct: 61 IVNIHLVRDKKTGKSRGFGFICYEDQRSTVLAVDNFNGIKIKGRTIRVDHASNYRPPRDS 120
Query: 120 KYTDEETKKLRTIGCAP 136
+ D+ T++LR GC P
Sbjct: 121 EDIDDVTRELREKGCGP 137
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
LT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYGE+V
Sbjct: 1 LTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEVV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
N+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD++
Sbjct: 61 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 120
Query: 122 TDEETKKLRTIGCAPGT 138
D+ T+ L+ GC T
Sbjct: 121 MDDVTRVLQEKGCGAHT 137
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Query: 2 NPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
+PLT VK I +L+E+E G K SWH +YKDSAW+F+GG PY+LSEGD+IC+FSQYGE
Sbjct: 1 SPLTKVKLINQLNEREADLGVKETVSWHSEYKDSAWVFIGGFPYELSEGDIICVFSQYGE 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
IVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RT+RVDHV DY+PPKD+
Sbjct: 61 IVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTLRVDHVKDYRPPKDS 120
Query: 120 KYTDEETKKLRTIGC 134
+ D+ TK LR GC
Sbjct: 121 EDIDDVTKMLREEGC 135
>gi|170572253|ref|XP_001892040.1| RNA binding motif protein [Brugia malayi]
gi|158603075|gb|EDP39148.1| RNA binding motif protein, putative [Brugia malayi]
Length = 168
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 124/170 (72%), Gaps = 11/170 (6%)
Query: 1 MNPLTNVKNIKKLSEQELSSG----SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNPLTN++N K++++EL G + SWH +Y DSAWI++GGLPYDL+EGDVI +FSQ
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NL+RD+ TGKS+GF F+CYEDQRST+L+VDN NG+K+L R IRVDHV +YK P
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKK 166
K ++ DEET+K+ GCAP P+ + +D P E+ KK
Sbjct: 121 KYHEDIDEETRKILEDGCAPK-------PIAVHQADESEDVDPVETLKKK 163
>gi|443697654|gb|ELT98021.1| hypothetical protein CAPTEDRAFT_86725, partial [Capitella teleta]
Length = 156
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 113/133 (84%), Gaps = 3/133 (2%)
Query: 7 VKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
++N+ K++E+EL +GS SWH ++K+SAW++ GGLPYDL+EGDV+C+FSQYGEIVN+
Sbjct: 1 IRNLNKINERELELGLAGSGASWHKEFKESAWVYCGGLPYDLTEGDVVCVFSQYGEIVNV 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
NL+RDK TGKSKGFCF+CYEDQRST+L+VDNLNG K+L RTIRVDHV DYK PK++ D
Sbjct: 61 NLIRDKGTGKSKGFCFLCYEDQRSTILAVDNLNGFKILGRTIRVDHVKDYKAPKEHGDED 120
Query: 124 EETKKLRTIGCAP 136
E T+K+R GCAP
Sbjct: 121 EVTRKIRAEGCAP 133
>gi|395509895|ref|XP_003759222.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Sarcophilus
harrisii]
Length = 274
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 112/135 (82%), Gaps = 2/135 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT VK I +L+++E+ G SWH +YKDSAWIF+GGLPY+L+EGDVIC+FSQYG
Sbjct: 1 MNALTKVKLISELNQREVELGLTENVSWHAEYKDSAWIFIGGLPYELTEGDVICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIRGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIG 133
++ D+ T+ LR G
Sbjct: 121 SRNLDDVTRMLRGKG 135
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E+ G K SWH +YK SAWIFVGGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P++
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120
Query: 119 NKYTDEETKKLRTIGCA 135
++ D+ T++L+ GC
Sbjct: 121 SEDVDDVTRELQEKGCG 137
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT VK I +L+E+E+ G K SWH +YKDSAW+FVGGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNSLTKVKLINELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PP+D
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
Query: 119 NKYTDEETKKLRTIGCA 135
+++ + + ++ GC
Sbjct: 121 SRHVGDVVRSIQEKGCG 137
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Query: 3 PLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
PLT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGDVIC+FSQYGE+
Sbjct: 105 PLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYGEV 164
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+ PK ++
Sbjct: 165 VNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRVPKVSE 224
Query: 121 YTDEETKKLRTIGCAPGT 138
D+ T++L+ +GC T
Sbjct: 225 DMDDVTRELQAMGCGVNT 242
>gi|312072049|ref|XP_003138888.1| hypothetical protein LOAG_03303 [Loa loa]
gi|307765946|gb|EFO25180.1| hypothetical protein LOAG_03303 [Loa loa]
Length = 312
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 123/170 (72%), Gaps = 11/170 (6%)
Query: 1 MNPLTNVKNIKKLSEQELSSG----SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNPLTN++ K++E+EL G S SWH +Y +SAWI+VGGLP+DL+EGDVI +FSQ
Sbjct: 1 MNPLTNIRKQNKINERELLLGFTGSSSKSWHQKYSNSAWIYVGGLPFDLNEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NL+RD+ TGKS+GF F+CYEDQRST+L+VDN NG+K+L R IRVDHV +YK P
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKK 166
K ++ DEET+K+ GCAP P+ + + D P E+ +K
Sbjct: 121 KYHEDIDEETRKIWEDGCAPK-------PIAIHQVDEMDDIDPVETLKRK 163
>gi|225711148|gb|ACO11420.1| RNA-binding motif protein, X-linked 2 [Caligus rogercresseyi]
Length = 434
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 113/139 (81%), Gaps = 3/139 (2%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNP+TN KN++K++++EL +G+K+SWH YKDSAWIF+GGL Y+LSEGD+I IFSQY
Sbjct: 1 MNPITNAKNLQKMNQRELELGLAGTKSSWHYDYKDSAWIFIGGLNYELSEGDIISIFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GE+V++NLVRD +GKSKGF F+CYEDQ ST+L+VDNLN + +L RTIRVDHV YK PK
Sbjct: 61 GEVVHINLVRDGKSGKSKGFAFLCYEDQLSTILAVDNLNAITLLQRTIRVDHVQTYKLPK 120
Query: 118 DNKYTDEETKKLRTIGCAP 136
D + DE+ K+L GCAP
Sbjct: 121 DLERLDEDKKRLFMEGCAP 139
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 111/131 (84%), Gaps = 2/131 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+KV RTIRVDHV++Y+ PK
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 119 NKYTDEETKKL 129
++ D+ TK+L
Sbjct: 121 SEEMDDVTKEL 131
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 113/137 (82%), Gaps = 2/137 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
L VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYGEIV
Sbjct: 16 LQEVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIV 75
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
N+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ PKD++
Sbjct: 76 NINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEE 135
Query: 122 TDEETKKLRTIGCAPGT 138
D+ T++L+ GC T
Sbjct: 136 MDDVTRQLQEKGCGAHT 152
>gi|440898620|gb|ELR50076.1| RNA-binding motif protein, X-linked 2, partial [Bos grunniens
mutus]
Length = 330
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 115/140 (82%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
+PLT VK I +L+E+E+ G K SWH++YKDSAWIF+GGLPY+L+EGD+IC+FSQY
Sbjct: 1 FSPLTKVKLINELNEREVQLGVAEKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYR 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLV DK TGKSKGFCF+CYEDQRST+L+VD+ NG+K+ RTIRVDHV++Y+ P+D
Sbjct: 61 EIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDHVSNYRLPED 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
++ DE T++L+ GC T
Sbjct: 121 SEEMDEVTRELQERGCGTHT 140
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 111/131 (84%), Gaps = 2/131 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT VK I +L+E+E+ G K SWH +YKDSAWIF+GGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNALTKVKLINELNEEEVKLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+KV RTIRVDHV++Y+ PK
Sbjct: 61 EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKVKGRTIRVDHVSNYRAPKS 120
Query: 119 NKYTDEETKKL 129
++ D+ TK+L
Sbjct: 121 SEEMDDVTKEL 131
>gi|126324409|ref|XP_001377779.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 198
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 117/152 (76%), Gaps = 3/152 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT VK I +L+E+E+ G K SWH +YKDSAW+FVGGLPY+L+EGD+IC+FSQYG
Sbjct: 1 MNSLTKVKLISELNEREVELGVAEKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIVN+NLVRDK T KSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PP+D
Sbjct: 61 EIVNINLVRDKKTRKSKGFCFLCYEDQRSTILAVDNFNGIKIRGRTIRVDHVANYRPPQD 120
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTED 150
+++ + + ++ GC T P +ED
Sbjct: 121 SRHVGDVVRSIQEKGCGVKTP-SPAFPESSED 151
>gi|225718494|gb|ACO15093.1| RNA-binding motif protein, X-linked 2 [Caligus clemensi]
Length = 359
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 112/139 (80%), Gaps = 3/139 (2%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNP+TN KN+ K++++EL +G+K SWH YKDSAWIF+GGL Y+LSEGD+I IFSQY
Sbjct: 1 MNPITNAKNLAKMNQRELELGIAGTKGSWHYDYKDSAWIFMGGLNYELSEGDIISIFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GE+V++NLVRD TGKSKGF F+CYEDQRST+L+VD+LN + +L RTIRVDHV YK PK
Sbjct: 61 GEVVHINLVRDGKTGKSKGFAFLCYEDQRSTILAVDDLNAITLLKRTIRVDHVQTYKLPK 120
Query: 118 DNKYTDEETKKLRTIGCAP 136
D + DE+ +KL GCAP
Sbjct: 121 DLERLDEDKRKLFMEGCAP 139
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 2/138 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E G K SWH YK+SAW+F+GG PY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EI N+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAP 136
D+ TK+LR GCAP
Sbjct: 121 TDDIDDITKQLREEGCAP 138
>gi|324512768|gb|ADY45275.1| RNA-binding motif protein, X-linked 2 [Ascaris suum]
Length = 318
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 111/140 (79%), Gaps = 4/140 (2%)
Query: 1 MNPLTNVKNIKKLSEQELS----SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNP+TN++N K++ +EL GS SWHD+Y +SAWI++GGLPYDL+EGD+I +FSQ
Sbjct: 1 MNPITNIRNQNKITTRELELGVIGGSGKSWHDKYANSAWIYIGGLPYDLNEGDIITVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NL+RD TGKS+GF F+CY+DQRSTVL+VDN NG+K+L R IRVDHV +YK P
Sbjct: 61 YGEIVNINLIRDHKTGKSRGFAFLCYQDQRSTVLAVDNFNGIKLLKRMIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAP 136
K + DEE ++L GCAP
Sbjct: 121 KYREDVDEEIRRLWEEGCAP 140
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 2/138 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I +L+E+E G K SWH YK+SAW+F+GG PY+L+EGD+IC+FSQYG
Sbjct: 1 MNPLTKVKLINELNEREAQLGIKETVSWHSVYKNSAWVFIGGFPYELTEGDIICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EI N+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PPKD
Sbjct: 61 EIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRPPKD 120
Query: 119 NKYTDEETKKLRTIGCAP 136
D+ TK+LR GCAP
Sbjct: 121 TDDIDDITKQLREEGCAP 138
>gi|402582034|gb|EJW75980.1| Rbmx2 protein, partial [Wuchereria bancrofti]
Length = 147
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG----SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNPLTN++ K++++EL G + SWH +Y DSAWI++GGLPYDL+EGDVI +FSQ
Sbjct: 1 MNPLTNIREQNKINDRELLLGFTGSNNKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NL+RD+ TGKS+GF F+CYEDQRST+L+VDN NG+K+L R IRVDHV +YK P
Sbjct: 61 YGEIVNINLIRDRKTGKSRGFAFVCYEDQRSTILAVDNFNGIKLLKRIIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAP 136
K ++ DEET+K+ GCAP
Sbjct: 121 KYHEDIDEETRKIWEGGCAP 140
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 106/126 (84%), Gaps = 2/126 (1%)
Query: 13 LSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKI 70
++E+EL G K SWHDQYKDSAW+F+GGLPYDL+EGDVI +FSQYGE+VN+NLVRD
Sbjct: 1 MNERELELGLIGKKSWHDQYKDSAWVFIGGLPYDLTEGDVIAVFSQYGELVNINLVRDGK 60
Query: 71 TGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLR 130
TGKS+GFCF+CYEDQRSTVL+VDNLNG+K+L RTIRVDHV YK PK++ DEET ++R
Sbjct: 61 TGKSRGFCFLCYEDQRSTVLAVDNLNGIKLLGRTIRVDHVEKYKVPKEHGDEDEETMRVR 120
Query: 131 TIGCAP 136
G AP
Sbjct: 121 MEGIAP 126
>gi|17532167|ref|NP_495237.1| Protein C30B5.4 [Caenorhabditis elegans]
gi|351058643|emb|CCD66136.1| Protein C30B5.4 [Caenorhabditis elegans]
Length = 302
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 115/154 (74%), Gaps = 4/154 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS----KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNP+TN+KN +++E+ELS G K SWH YKDSAWI++GGL Y LSEGDVI +FSQ
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGE++N+NL+RDK TGKSKGF F+CY+DQRST+L+VDN NG+ + R IRVDHV +YK P
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAPGTEFGSILPVKTED 150
K + D+ETK+L GCAP P++ ++
Sbjct: 121 KYKEDADDETKRLWEEGCAPKPVMREAAPMEVQE 154
>gi|308503018|ref|XP_003113693.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
gi|308263652|gb|EFP07605.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
Length = 302
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 119/159 (74%), Gaps = 4/159 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS----KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNP+TN+KN +++E+EL+ G K SWH YKDSAWI++GGL Y L+EGDVI +FSQ
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALTEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGE++N+NL+RDK TGKSKGF F+CY+DQRSTVL+VDN NG+ + R IRVDHV +YK P
Sbjct: 61 YGEVMNINLIRDKETGKSKGFAFLCYKDQRSTVLAVDNFNGISLHKRMIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEK 155
K + D+ETK+L GCAP + P++ ++ + EK
Sbjct: 121 KYKEDADDETKRLWEEGCAPKPIMRTADPMEVQEKRIEK 159
>gi|221129809|ref|XP_002164481.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Hydra
magnipapillata]
Length = 255
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 112/142 (78%), Gaps = 4/142 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNPLTNV+NI KL++Q+L +G +WH QYKDSA+IF+GGLPYDL+EGDV+ +FSQY
Sbjct: 1 MNPLTNVRNIGKLNDQDLQNGIFDHNLTWHSQYKDSAFIFIGGLPYDLTEGDVLAVFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GEIVN+NLVRDK TGK KG+ F+CYEDQRST+L+VDN NG+K+ RTIRVDHV +Y+PPK
Sbjct: 61 GEIVNINLVRDKKTGKFKGYGFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHVGEYRPPK 120
Query: 118 -DNKYTDEETKKLRTIGCAPGT 138
D K + K + CAP T
Sbjct: 121 GDEKDESGKYKDKVEVSCAPRT 142
>gi|268531492|ref|XP_002630872.1| Hypothetical protein CBG02589 [Caenorhabditis briggsae]
Length = 302
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 110/140 (78%), Gaps = 4/140 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS----KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNP+TN+KN +++E+EL+ G K SWH YKDSAWI++GGL Y LSEGDVI +FSQ
Sbjct: 1 MNPITNIKNQNRMNERELNLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGE++N+NL+RDK TGKSKGF F+CY+DQRSTVL+VDN NG+ + R IRVDHV +YK P
Sbjct: 61 YGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEEYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAP 136
K + D+ETK+L GCAP
Sbjct: 121 KYKEDADDETKRLWEEGCAP 140
>gi|341892274|gb|EGT48209.1| hypothetical protein CAEBREN_24057 [Caenorhabditis brenneri]
Length = 302
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 113/154 (73%), Gaps = 4/154 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS----KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNP+TN+KN +++E+ELS G K SWH YKDSAWI++GGL Y LSEGDVI +FSQ
Sbjct: 1 MNPITNIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGE++N+NL+RDK TGKSKGF F+CY+DQRSTVL+VDN NG+ + R IRVDHV YK P
Sbjct: 61 YGEVMNVNLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNFNGITLHKRMIRVDHVEKYKVP 120
Query: 117 KDNKYTDEETKKLRTIGCAPGTEFGSILPVKTED 150
+ DEET++L GCAP P++ ++
Sbjct: 121 NYKEDADEETRRLWEEGCAPKAIMREAEPMEVQE 154
>gi|198436817|ref|XP_002127336.1| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Ciona
intestinalis]
Length = 377
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 111/139 (79%), Gaps = 3/139 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MN LT ++ I +L+ +EL SG + +SWH+QYKDSAW++VG LP++LSEGDVIC+ SQY
Sbjct: 1 MNVLTKIRLINELNAKELRSGVAGTSSSWHNQYKDSAWVYVGSLPFELSEGDVICVMSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GE+VN+NL+RD+ TGKSKGF F+CYEDQ+ST+L+VDNLNG K+ R +RVDHV Y+ PK
Sbjct: 61 GEVVNINLIRDRKTGKSKGFAFVCYEDQKSTILAVDNLNGSKIKGRQMRVDHVLAYQVPK 120
Query: 118 DNKYTDEETKKLRTIGCAP 136
++ DE T+++R G AP
Sbjct: 121 EDDEVDEVTERIRERGVAP 139
>gi|256087425|ref|XP_002579870.1| rna recognition motif containing protein [Schistosoma mansoni]
Length = 279
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 111/153 (72%), Gaps = 17/153 (11%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNP+TN KN ++E+ELS +G+ +SWH QYKDSAWI+VGGL YDL+EGDVIC+FSQY
Sbjct: 22 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 81
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GEIVN+NLVRDK TG SKGF F+CYEDQRSTVL+ DNLNG+K+ R IRVDHV Y+ PK
Sbjct: 82 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPK 141
Query: 118 DN--------------KYTDEETKKLRTIGCAP 136
D + TD ++ ++ GC P
Sbjct: 142 DGVLDVGHTDKKSEYKRPTDSVSEFVKEHGCGP 174
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 111/153 (72%), Gaps = 17/153 (11%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNP+TN KN ++E+ELS +G+ +SWH QYKDSAWI+VGGL YDL+EGDVIC+FSQY
Sbjct: 1 MNPITNAKNQNLMNEKELSLGHTGTVSSWHRQYKDSAWIYVGGLHYDLTEGDVICVFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GEIVN+NLVRDK TG SKGF F+CYEDQRSTVL+ DNLNG+K+ R IRVDHV Y+ PK
Sbjct: 61 GEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVLATDNLNGIKLGGRIIRVDHVEKYRVPK 120
Query: 118 DN--------------KYTDEETKKLRTIGCAP 136
D + TD ++ ++ GC P
Sbjct: 121 DGVLDVGHTDKKSEYKRPTDSVSEFVKEHGCGP 153
>gi|358335067|dbj|GAA28104.2| RNA-binding motif protein X-linked 2 [Clonorchis sinensis]
Length = 314
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 102/135 (75%), Gaps = 3/135 (2%)
Query: 1 MNPLTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
MNP+TN KN ++ +EL +G+ +SWH QYKDSAWIF+GGL ++L+EGD+IC+FSQY
Sbjct: 1 MNPITNTKNQNLMNMRELGLGYTGTASSWHRQYKDSAWIFIGGLNFELTEGDIICVFSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GE+VN+NLVRDK TG SKGF F+CYEDQRSTVL+ DNLNG+K+ R IRVDHV YK P
Sbjct: 61 GEVVNINLVRDKKTGISKGFAFLCYEDQRSTVLATDNLNGIKLAGRIIRVDHVEKYKVPT 120
Query: 118 DNKYTDEETKKLRTI 132
D KK R I
Sbjct: 121 DGTVDVGTGKKKRRI 135
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Sarcophilus harrisii]
Length = 310
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 94/107 (87%)
Query: 29 QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
+Y+++ W+F+GGLPY+L+EGD+IC+FSQYGEIVN+NLVRDK TGKSKGFCF+CYEDQRST
Sbjct: 12 EYRENXWVFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRST 71
Query: 89 VLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
+L+VDN NG+K+ RTIRVDHV +Y+PPKD+K D+ T+ LR GC
Sbjct: 72 ILAVDNFNGIKIRGRTIRVDHVANYRPPKDSKNLDDVTRALREKGCG 118
>gi|195997877|ref|XP_002108807.1| hypothetical protein TRIADDRAFT_17435 [Trichoplax adhaerens]
gi|190589583|gb|EDV29605.1| hypothetical protein TRIADDRAFT_17435, partial [Trichoplax
adhaerens]
Length = 119
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 102/117 (87%), Gaps = 2/117 (1%)
Query: 4 LTNVKNIKKLSEQELS-SGSK-TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
++NVK I+K++E EL +GSK T+WHDQYK+SA++F+GGL Y L+EGD+I +FSQYGE+V
Sbjct: 1 ISNVKAIQKINETELHLTGSKSTTWHDQYKESAYVFIGGLAYGLTEGDIITVFSQYGEVV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
++N +RDK TGK+KG+CF+ YEDQRST L+VDN NG+K+L RTIRVDHV +Y+PPKD
Sbjct: 61 DINYIRDKKTGKTKGYCFLAYEDQRSTTLAVDNFNGIKLLDRTIRVDHVKNYRPPKD 117
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 94/111 (84%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ VK I+K++E EL G++ SWHDQYKDSA+IF+GGLPY+L+EGDVI IFSQYGE VN+
Sbjct: 1 MNVVKEIQKINEHELQLGTRGSWHDQYKDSAYIFIGGLPYELTEGDVISIFSQYGEPVNV 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
N+ RDK+TGK KGF F+ YEDQ+STVL+VDNLNG ++ RTIRVDHV+ YK
Sbjct: 61 NMPRDKVTGKPKGFAFLMYEDQQSTVLAVDNLNGANIVGRTIRVDHVSKYK 111
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+K++ QE + G SWH +YK+SA++FVGG+P+DL+EGD++ +FSQYG
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
EIV++NLVRDK TGKSKGF F+ YEDQRST L+VDNLNG ++L R IRVDHV++Y
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNY 115
>gi|427781965|gb|JAA56434.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 109
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 93/107 (86%), Gaps = 2/107 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLTNVKNI KL+E EL G KTSWH +YKDSAWIF+GGL Y L+EGDVIC+FSQYG
Sbjct: 1 MNPLTNVKNITKLNETELKLGVTEKTSWHKKYKDSAWIFIGGLDYQLTEGDVICVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTI 105
E+VN+NL+RDK TGKSKG+CF+CYEDQRSTVLSVDNLNG+ V S ++
Sbjct: 61 EVVNINLIRDKKTGKSKGYCFLCYEDQRSTVLSVDNLNGISVSSPSL 107
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 101/128 (78%), Gaps = 5/128 (3%)
Query: 7 VKNIKKLSEQELSSGSKT-SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I ++++ EL S + T SWHD YKDSA+IFVGGL YDLSEGDVI IFSQYGEI+++NL
Sbjct: 4 VREINRINQVELDSATGTASWHDDYKDSAYIFVGGLSYDLSEGDVITIFSQYGEIMDVNL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKY 121
RDK TGK+KGF F+ YEDQRSTVL+VDNLNG KVL RT+RVDHV +YK PK D ++
Sbjct: 64 PRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNEDGEW 123
Query: 122 TDEETKKL 129
D E + L
Sbjct: 124 VDAEEQSL 131
>gi|430812740|emb|CCJ29861.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 185
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 126/181 (69%), Gaps = 16/181 (8%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I +++ ++ + SWH QYKDSA+I++GGLPYDL+EGD+ICIFSQYGE +++NL+
Sbjct: 2 VREIARINAAQIGASESESWHAQYKDSAYIYIGGLPYDLTEGDIICIFSQYGEPLDINLI 61
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEET 126
RDK TGKSKGFCF+ YEDQRST+L+VDNL+G KVL RT++VDHV +Y+ PK + DE++
Sbjct: 62 RDKKTGKSKGFCFLKYEDQRSTILAVDNLSGAKVLGRTLKVDHVLNYRHPKQDS-DDEQS 120
Query: 127 KKLRTIGCAPGTEFGSILPVKTEDIKQEKD-------SKPTESKDKKRKHKEKKVKKEKK 179
K+ + AP P+ E I++EK SK + +D R + +K +KE +
Sbjct: 121 GKMIGMNAAP--------PILEEVIQEEKKEDSDEEFSKGIDPEDPLRSYIIEKRRKEAR 172
Query: 180 K 180
+
Sbjct: 173 R 173
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%), Gaps = 5/128 (3%)
Query: 7 VKNIKKLSEQELSSGSKT-SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I K++E+EL GS T SWHD+YKDSA+IF+GGL +DL+EGDVI IFSQYGE++++NL
Sbjct: 4 VREINKINERELELGSSTASWHDEYKDSAYIFIGGLHFDLTEGDVITIFSQYGEVMDVNL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKY 121
RDK TGK+KGF F+ YEDQRST+L+VDNLNG KVL RT+RVDHV +YK PK D ++
Sbjct: 64 PRDKETGKTKGFGFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVRNYKQPKVKGEDGEW 123
Query: 122 TDEETKKL 129
+ E + L
Sbjct: 124 QEREEQSL 131
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 101/128 (78%), Gaps = 5/128 (3%)
Query: 7 VKNIKKLSEQELSSGSKT-SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I ++++ EL S + T SWHD YKDSA++FVGGL YDLSEGDVI IFSQYGEI+++NL
Sbjct: 4 VREINRINQVELDSATGTASWHDDYKDSAYVFVGGLSYDLSEGDVITIFSQYGEIMDVNL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKY 121
RDK TGK+KGF F+ YEDQRSTVL+VDNLNG KVL RT+RVDHV +YK PK D ++
Sbjct: 64 PRDKETGKTKGFGFVMYEDQRSTVLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNEDGEW 123
Query: 122 TDEETKKL 129
D E + L
Sbjct: 124 VDAEEQSL 131
>gi|313221560|emb|CBY36055.1| unnamed protein product [Oikopleura dioica]
gi|313239684|emb|CBY14576.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT ++ I +L+ +EL G+ + SWH QYKDSAWI+ G L Y L+EGD++ +FSQ+G
Sbjct: 1 MNILTKIRLINELNYKELRHGTNPENSWHMQYKDSAWIYAGNLSYKLTEGDILAVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EI N+NLVRD+ TG SKGFCFICYEDQRST+L+VDN NG+++ +R +RVDHV +YK PK
Sbjct: 61 EISNVNLVRDRETGTSKGFCFICYEDQRSTILAVDNFNGMELCNRPVRVDHVEEYKVPKI 120
Query: 119 NKYTDEETKKLRTIGCAPGT 138
+ + E KKL+ G P T
Sbjct: 121 HDDMEPEIKKLKIEGVGPKT 140
>gi|15232729|ref|NP_190296.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
gi|75337070|sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=AtC3H42
gi|6522593|emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana]
gi|27311733|gb|AAO00832.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|34098859|gb|AAQ56812.1| At3g47120 [Arabidopsis thaliana]
gi|332644724|gb|AEE78245.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
Length = 352
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
Query: 1 MNPLTNVKNIKKLS--EQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VKN++K++ E +L + SWH +YK+SA+++VGG+P+DL+EGD++ +FSQYG
Sbjct: 1 MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIV++NL+RDK TGKSKGF F+ YEDQRST+L+VDNLNG VL RTI+VDH YK ++
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120
Query: 119 NKYTDEETKK 128
DEET++
Sbjct: 121 ---EDEETRR 127
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 98/119 (82%), Gaps = 2/119 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT +KNI+K +++E+ +G++ SWH +YK SA+IF GGL YDL+EGD++ +F+Q+G
Sbjct: 1 MNPLTQIKNIQKATKREIETGTQDSASWHAKYKHSAYIFAGGLDYDLTEGDLLAVFAQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
E+V+LNL+RDK +GKSKGF F+ YEDQRSTVL+ DN NG KV RTIRV+HV++YK K
Sbjct: 61 EVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNFNGAKVAGRTIRVEHVDNYKKRK 119
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/111 (66%), Positives = 93/111 (83%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ ++ IK+++EQEL SGS SWHDQYKDSA+I VGGLPY+L+EGDVI IFSQYGEIV++
Sbjct: 1 MNQIQAIKRINEQELQSGSAASWHDQYKDSAYINVGGLPYNLTEGDVITIFSQYGEIVDI 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
N+ RD TGK +GF ++ Y DQRSTVL+VDNLNG +VL RT+RVDHV +YK
Sbjct: 61 NMPRDPQTGKPRGFAWLMYADQRSTVLAVDNLNGAQVLGRTLRVDHVLNYK 111
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 94/112 (83%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I +++EQEL G SWHD+YKDSA+I+VGGL +DL+EGDVI IFSQYGE++++NL
Sbjct: 4 VREINRINEQELKLGVSGSWHDEYKDSAYIYVGGLHFDLTEGDVITIFSQYGEVMDVNLP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
RDK TGK+KGF F+ YEDQRST+L+VDNLNG VL +T+RVDHV DYK PK+
Sbjct: 64 RDKHTGKTKGFGFLMYEDQRSTILAVDNLNGANVLDKTLRVDHVKDYKQPKE 115
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+K++ QE + G SWH +YK+SA++FVGG+P+DL+EGD++ +FSQYG
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
EIV++NLVRDK TGKSKGF F+ YEDQRST L+VDNLNG ++L R IRVDHV++Y
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNY 115
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 92/112 (82%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
VK I K++E+EL +K SWHD YKDSA+IF GGL +L+EGDVI IFSQYGEI+++N+
Sbjct: 4 VKEINKINERELDLDTKGSWHDDYKDSAYIFAGGLNTELTEGDVITIFSQYGEIMDVNMP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
RDK TGK KGF F+ YEDQRSTVL+VDNLNG K+L RTIRVDHV +YK P++
Sbjct: 64 RDKETGKPKGFAFVMYEDQRSTVLAVDNLNGAKILERTIRVDHVKNYKQPRE 115
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 94/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+K++ QE + G + SWH +YKDSA++FVGG+PYDL+EGD++ +F+QYG
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
EIV++NL+RDK TGKSKG+ F+ YEDQRST L+VDNLNG ++L R +RVDHV
Sbjct: 61 EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHV 112
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 98/132 (74%), Gaps = 6/132 (4%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ +V++I L E EL SWH QY SA+IF+GGL YDL+EGDV+ +FSQYGEIVN+
Sbjct: 1 MKSVRDIT-LRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNI 59
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
NLVRDK TGKSKGFCFI YEDQRST+L+VDN NG+K+ R+IRVDHV +Y+ PK D
Sbjct: 60 NLVRDKKTGKSKGFCFIGYEDQRSTILAVDNFNGIKLCGRSIRVDHVQNYRRPK-----D 114
Query: 124 EETKKLRTIGCA 135
E ++ GCA
Sbjct: 115 EHGNEIIEKGCA 126
>gi|241605858|ref|XP_002406132.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215502625|gb|EEC12119.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 114
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 90/100 (90%), Gaps = 2/100 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLTNVKNI KL+E EL G KTSWH +YKDSAWIFVGGL Y+L+EGD+IC+FSQ+G
Sbjct: 1 MNPLTNVKNITKLNETELKLGINEKTSWHKKYKDSAWIFVGGLDYELTEGDIICVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGV 98
EIVN+NL+RDK TGKSKG+CF+C+EDQRSTVLSVDNLNG+
Sbjct: 61 EIVNINLIRDKKTGKSKGYCFLCFEDQRSTVLSVDNLNGI 100
>gi|403415035|emb|CCM01735.1| predicted protein [Fibroporia radiculosa]
Length = 352
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 90/111 (81%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I K++E+EL G SWHD YKDSA+IF+GGL DL+EGDVI IFSQYGE++++N+
Sbjct: 4 VREINKINERELDLGGTGSWHDDYKDSAYIFIGGLHSDLTEGDVITIFSQYGEVMDVNMP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RDK TGK++GF F+ YEDQRST+L+VDNLN VL RT+RVDHV DYK PK
Sbjct: 64 RDKATGKTRGFAFLMYEDQRSTILAVDNLNSANVLERTLRVDHVKDYKQPK 114
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 91/111 (81%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I K++E+EL G SWHD YKDSA+IFVGGL DL+EGDVI IFSQYGEI+++NL
Sbjct: 4 VREINKINERELDLGISGSWHDDYKDSAYIFVGGLHRDLTEGDVITIFSQYGEIMDINLP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RDK TGK KGF F+ YEDQRST+L+VDNLNG +VL RT+RVDHV +YK PK
Sbjct: 64 RDKETGKQKGFAFLMYEDQRSTILAVDNLNGAQVLDRTLRVDHVKNYKQPK 114
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 96/115 (83%), Gaps = 2/115 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+K++ QE + G SWH +YK+SA++FVGG+P+DL+EGD++ +FSQYG
Sbjct: 1 MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
EIV++NLVRDK TGKSKGF F+ YEDQRST L+VDNLNG ++L R IRVDHV++Y
Sbjct: 61 EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNY 115
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
Query: 1 MNPLTNVKNIKKLS--EQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VKN++K++ E +L + SWH +YK+SA+++VG +P+DL+EGD++ +FSQYG
Sbjct: 1 MNPLTQVKNLQKINARESDLGISEEASWHAKYKNSAYVYVGCIPFDLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIV++NL+RDK TGKSKGF F+ YEDQRSTVL+VDNLNG VL RTI+VDH +YK ++
Sbjct: 61 EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNLNGALVLGRTIKVDHCREYKKHEE 120
Query: 119 NKYTDEETKK 128
DEET++
Sbjct: 121 E---DEETRR 127
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 92/111 (82%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
K + +++E+EL G SWHDQYKDSA++++G LP DL+EGDVI I SQYGE++++NL R
Sbjct: 3 KEVARINERELQLGVSGSWHDQYKDSAYVYIGNLPRDLTEGDVITIMSQYGEVMDVNLPR 62
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
DK TGK +GF F+ YEDQRSTVL+VDNLNG KVL RTIRVDHV+DYK PK+
Sbjct: 63 DKQTGKIRGFGFLMYEDQRSTVLAVDNLNGAKVLDRTIRVDHVSDYKQPKE 113
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E L G SWH ++KDSA++FVGG+PYDL+EGD++ +F+QYG
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRST+L+VDNLNG KVL R +RVDHV
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHV 112
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E + G SWH ++KDSA++FVGG+PYDL+EGD++ +F+QYG
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFKDSAYVFVGGVPYDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRSTVL+VDNLNG KVL R IRVDHV
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHV 112
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 5/128 (3%)
Query: 7 VKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I K++++EL G S SWHD+YKDSA+I++GGL Y+L+EGD+I IFSQYGE +++NL
Sbjct: 23 VREINKINQRELDLGLSGASWHDEYKDSAYIYIGGLNYELTEGDIITIFSQYGEPLDVNL 82
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKY 121
VRDK TGKSKGF F+ YEDQRSTVL+VDNLNG +VL+RT+RVDHV DYK K D +
Sbjct: 83 VRDKETGKSKGFAFLMYEDQRSTVLAVDNLNGAQVLNRTLRVDHVRDYKQKKVKGEDGEL 142
Query: 122 TDEETKKL 129
D E + L
Sbjct: 143 VDPEEQSL 150
>gi|336373895|gb|EGO02233.1| hypothetical protein SERLA73DRAFT_178081 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386805|gb|EGO27951.1| hypothetical protein SERLADRAFT_462274 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 101/127 (79%), Gaps = 4/127 (3%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I K++E+EL G SWHD+YKDSA+IF+GGL ++L+EGDVI IFSQYGE++++NL
Sbjct: 4 VREISKINERELELGVSGSWHDEYKDSAYIFIGGLNFELTEGDVIAIFSQYGEVMDVNLP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP----KDNKYT 122
RDK TGK++GF F+ YEDQRSTVL+VDNLNG KVL +T+RVDHV +YK P +D ++
Sbjct: 64 RDKNTGKTRGFGFLMYEDQRSTVLAVDNLNGAKVLEKTLRVDHVKNYKQPGAKGEDGEWR 123
Query: 123 DEETKKL 129
+ E + L
Sbjct: 124 EPEEQSL 130
>gi|328772157|gb|EGF82196.1| hypothetical protein BATDEDRAFT_34645 [Batrachochytrium
dendrobatidis JAM81]
Length = 153
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Query: 7 VKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+K I+KL+ EL G K SWH+QYKDSA+I++GGLPY L+EGDVIC+FSQ+GE+V+L+
Sbjct: 20 IKEIQKLNALELERGLTDKGSWHNQYKDSAYIYIGGLPYHLTEGDVICVFSQFGEVVDLD 79
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
+VRDK TGKSKGF F+ YEDQRSTVL+VDNLNG+++ R IRVDH Y+ P+ + DE
Sbjct: 80 MVRDKETGKSKGFAFLAYEDQRSTVLAVDNLNGIQISGRVIRVDHTAKYRGPRRDDGFDE 139
Query: 125 ETKKLR 130
+ + R
Sbjct: 140 QAEYER 145
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 93/113 (82%), Gaps = 2/113 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++ +E L G + SWH +YKDSA++FVGG+P+DL+EGD++ +F+QYG
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
E+V++NLVRDK TGKSKGF F+ YEDQRST L+VDNLNG +VL R IRVDHV+
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVD 113
>gi|389744512|gb|EIM85695.1| hypothetical protein STEHIDRAFT_169554 [Stereum hirsutum FP-91666
SS1]
Length = 349
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 101/128 (78%), Gaps = 5/128 (3%)
Query: 7 VKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I K++E+EL G S SWHD+YKDSA+IF+GGL Y+L+EGDVI IFSQYGE++++NL
Sbjct: 4 VQEINKINERELDLGLSGASWHDEYKDSAYIFIGGLNYELTEGDVIAIFSQYGEVMDVNL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKY 121
R K TGK+KGF F+ YEDQRST+L+VDNLNG +VL RT+RVDHV +YK PK D ++
Sbjct: 64 PRSKETGKTKGFGFLMYEDQRSTILAVDNLNGAQVLERTLRVDHVKNYKQPKNKGEDGEW 123
Query: 122 TDEETKKL 129
+ E + L
Sbjct: 124 VESEEQSL 131
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 96/116 (82%), Gaps = 1/116 (0%)
Query: 3 PLTNVKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
P + VK I K+++ EL G S SWHD+YKDSA++FVGGL +DL+EGDVI IFSQYGE++
Sbjct: 1 PRSVVKEINKINQAELDLGLSGASWHDEYKDSAYVFVGGLHFDLTEGDVITIFSQYGEVM 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
+L++ RDK TGK+KGF F+ YEDQRSTVL+VDNLNG KVL RT+RVDHV +YK PK
Sbjct: 61 DLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQPK 116
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 95/111 (85%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ ++ I +++E+EL G K SWHD+YKDSA+I+VGGLP++L+EGD+I IFSQ+GEI+++
Sbjct: 1 MNTIREINRINERELELGVKGSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIMDV 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
NLVRDK TGKS+GF F+ YEDQRSTVL+VDN+NG +V+ RT++VDH +Y+
Sbjct: 61 NLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVIGRTLKVDHTRNYR 111
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
Query: 1 MNPLTNVKNIKKLS--EQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VKN +K++ EQ + + SWH +YKDSA+I+VGGL + L+EGDV+ +F+QYG
Sbjct: 1 MNPLTQVKNTQKITAREQAIGISDEGSWHAKYKDSAYIYVGGLSFGLTEGDVLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
E+V++NLVRDK TGKSKGF F+ YEDQRSTVL+VDNLNG +V SR I+VDHV+DYK
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFLAYEDQRSTVLAVDNLNGARVDSRIIKVDHVSDYK 116
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I++++ +E L+ SWH +YKDSA++FVGG+P+D +EGDVI +F+QYG
Sbjct: 1 MNPLTLVKRIQQINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDVIAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
E+V++NLVRDK TGKSKGF FI YEDQRST L+VDNLNG +V R IRVDHV+
Sbjct: 61 EVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGRIIRVDHVD 113
>gi|340387228|ref|XP_003392109.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Amphimedon queenslandica]
Length = 123
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 86/106 (81%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L E EL SWH QY SA+IF+GGL YDL+EGDV+ +FSQYGEIVN+NLVRDK TG
Sbjct: 9 LRELELGIEGGASWHQQYATSAYIFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTG 68
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
KSKGFCFI YEDQRST+L+VDN NG+KV R+IRVDHV +Y+ PKD
Sbjct: 69 KSKGFCFIGYEDQRSTILAVDNFNGIKVCGRSIRVDHVQNYRRPKD 114
>gi|148697138|gb|EDL29085.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Mus musculus]
Length = 296
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 94/135 (69%), Gaps = 28/135 (20%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MNPLT VK +GGLPY+L+EGD+IC+FSQYGEI
Sbjct: 1 MNPLTKVK----------------------------LIGGLPYELTEGDIICVFSQYGEI 32
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
VN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+ P++++
Sbjct: 33 VNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESE 92
Query: 121 YTDEETKKLRTIGCA 135
D+ T++L+ GC
Sbjct: 93 DVDDVTRELQEKGCG 107
>gi|302794524|ref|XP_002979026.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
gi|300153344|gb|EFJ19983.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
Length = 130
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VKN++K++ +E +SG SWH +YKDSA+IF GGL Y+L+EGD++ +F+QYG
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NL+RDK TGKSKG+ F+ YEDQRST L+VDNLNG +V RT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|302806382|ref|XP_002984941.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
gi|300147527|gb|EFJ14191.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
Length = 130
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VKN++K++ +E +SG SWH +YKDSA+IF GGL Y+L+EGD++ +F+QYG
Sbjct: 1 MNPLTQVKNLQKITARESASGIAESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NL+RDK TGKSKG+ F+ YEDQRST L+VDNLNG +V RT+RVDHV
Sbjct: 61 EVVDVNLIRDKGTGKSKGYGFLAYEDQRSTTLAVDNLNGAQVAGRTLRVDHV 112
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 93/113 (82%), Gaps = 2/113 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++ +E L G + SWH +YKDSA++FVGG+P+DL+EGD++ +F+QYG
Sbjct: 1 MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
E+V++NLVRDK TGKSKGF F+ YEDQRST L+VDNLNG +VL R IRVDHV+
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVD 113
>gi|298708119|emb|CBJ30461.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 402
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 3/136 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ IK+++E+EL G K SWH +YKDSAW+F GG PYDL+EGD++C+ SQ+GEI
Sbjct: 1 MNVIQEIKRINERELEQGVSGKASWHHEYKDSAWVFAGGFPYDLTEGDILCVMSQWGEIE 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NL R+K TGKSKGFCFI YE+Q+ST+L+VDN NG+ +L RTIRVDH + Y P + +
Sbjct: 61 DINLCREKDTGKSKGFCFIKYENQKSTILAVDNFNGIDLLGRTIRVDHKHKYSLPAEVRE 120
Query: 122 TDEETKKLRTI-GCAP 136
E+ + R G AP
Sbjct: 121 KAEKEDEERVARGEAP 136
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E L G SWH ++KDSA+++VGG+P+DL+EGD++ IF+QYG
Sbjct: 1 MNPLTQVKRTQVINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRST+L+VDNLNG KVL R IRVDHV
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIRVDHV 112
>gi|334349632|ref|XP_001381460.2| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Monodelphis domestica]
Length = 332
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 85/98 (86%)
Query: 38 VGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNG 97
+GGLPY+L+EGD+IC+FSQYGEIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG
Sbjct: 1 LGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNG 60
Query: 98 VKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
+K+ RTIRVDHV +Y+PPKD+ D+ T+ +R GC
Sbjct: 61 IKIRGRTIRVDHVANYRPPKDSTNLDDITRTIREKGCG 98
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E + G SWH +++ SA++FVGG+P+DL+EGD++ +F+QYG
Sbjct: 1 MNPLTQVKRTQVINQKEAALGLSEDASWHAKFRGSAYVFVGGVPFDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRSTVL+VDNLNG KVL R IRVDHV
Sbjct: 61 EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHV 112
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 67/111 (60%), Positives = 95/111 (85%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ ++ I +++E+EL G K SWHD+YKDSA+I+VGGLP++L+EGD+I IFSQ+GEI+++
Sbjct: 1 MNTIREINRINERELELGVKGSWHDEYKDSAYIYVGGLPFELTEGDLITIFSQWGEIMDV 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
NLVRDK TGKS+GF F+ YEDQRSTVL+VDN+NG +V+ RT++VDH +Y+
Sbjct: 61 NLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVMGRTLKVDHTRNYR 111
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+ ++ +E + G + SWH +YKDSA++FVGG+P+DL+EGD++ +F+QYG
Sbjct: 1 MNPLTLVKRIQNINSKEAALGISEEASWHAKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V+ NLVRDK TGKSKGF FI YEDQRST L+VDNLNG +VL R IRVDHV
Sbjct: 61 EVVDANLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVLGRIIRVDHV 112
>gi|320162903|gb|EFW39802.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 293
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 96/121 (79%), Gaps = 6/121 (4%)
Query: 4 LTNVKNIKKLSEQELSSG------SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
+ V+ I++++E+EL G S SWHD+++ SA++ VGG PY+L+EGD++C+ SQY
Sbjct: 1 MNTVRQIQRVNERELQRGLTASQSSSASWHDEFRGSAYVHVGGFPYELTEGDLLCVMSQY 60
Query: 58 GEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
GEIV++NLVRDK T KS G+CFI YEDQRSTVL+VDNLNG+K+ +RTIRVDHV DY+ K
Sbjct: 61 GEIVDINLVRDKKTNKSLGYCFIAYEDQRSTVLAVDNLNGIKIGNRTIRVDHVKDYRLTK 120
Query: 118 D 118
D
Sbjct: 121 D 121
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 101/126 (80%), Gaps = 3/126 (2%)
Query: 7 VKNIKKLSEQELS-SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I +++E+EL + + SWHDQYKDSA+IF+GGL Y+L+EGDVI +FSQYGE+V++++
Sbjct: 4 VREINRINERELDLAPGQGSWHDQYKDSAYIFIGGLNYELTEGDVITVFSQYGEVVDIDM 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK--DNKYTD 123
R+K TGK +GF F+ YEDQRSTVL+VDNLNG ++ RT+RVDHV +YK + D K+ D
Sbjct: 64 PREKSTGKRRGFAFLMYEDQRSTVLAVDNLNGAELAGRTLRVDHVQNYKQKELVDGKWVD 123
Query: 124 EETKKL 129
ET++L
Sbjct: 124 RETERL 129
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
Query: 35 WI-FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
W +GGLPY+L+EGD+IC+FSQYGEIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VD
Sbjct: 8 WFSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 67
Query: 94 NLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGT 138
N NG+K+ RTIRVDHV++Y+ PKD++ D+ T++L+ GC T
Sbjct: 68 NFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQLQEKGCGART 112
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 89/111 (80%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I ++++EL G SWHD+YKDSA IFVGGL DL+EGDVI IFSQYGEI+++N+
Sbjct: 4 VREINAINQRELELGLTASWHDEYKDSARIFVGGLHNDLTEGDVITIFSQYGEIMDINMP 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RDK TGK +GF F+ YEDQRST+L+VDNLNG KVL RT+RVDHV YK PK
Sbjct: 64 RDKETGKPRGFAFLMYEDQRSTILAVDNLNGAKVLERTLRVDHVKQYKQPK 114
>gi|167537650|ref|XP_001750493.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771033|gb|EDQ84707.1| predicted protein [Monosiga brevicollis MX1]
Length = 382
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 91/112 (81%), Gaps = 1/112 (0%)
Query: 7 VKNIKKLSEQELS-SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
V+ I+KL+E+ELS G+ SWHD Y DSA+I++GGL Y +EGDV+ +FSQYGE ++NL
Sbjct: 4 VREIQKLNERELSQGGAGKSWHDVYADSAYIYIGGLDYRFTEGDVLSVFSQYGEPTDINL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
VRDK +GKSKGFCF+ YEDQRST+L+VDN NGVK+ RTIRVDH +Y+ P+
Sbjct: 64 VRDKDSGKSKGFCFLAYEDQRSTILAVDNFNGVKLAGRTIRVDHCGEYEAPE 115
>gi|319433481|gb|ADV57656.1| RNA-binding protein [Bursaphelenchus xylophilus]
gi|319433483|gb|ADV57657.1| RNA-binding protein [Bursaphelenchus xylophilus]
Length = 316
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 4/140 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSSG----SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MN T ++ +L+E+ELS G + SWH YK+SAWI VGGL Y L+EGD++ +FSQ
Sbjct: 1 MNHKTKIRLQNELNEKELSLGYAGDTSKSWHSVYKESAWIHVGGLDYGLTEGDLLAVFSQ 60
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEI N+N++RD T KSKGF FICY+DQRSTVL+VDN NG+K+ R I+VDHV +KPP
Sbjct: 61 YGEICNVNIIRDYKTLKSKGFAFICYQDQRSTVLAVDNFNGIKIAGREIKVDHVESFKPP 120
Query: 117 KDNKYTDEETKKLRTIGCAP 136
K + E K+ GCAP
Sbjct: 121 KYKENVPEALMKIWREGCAP 140
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E L G SWH ++KDSA+++VGG+P+DL+EGD++ IF+QYG
Sbjct: 1 MNPLTQVKRTQIINQKEALLGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRST+L+VDNLNG KVL R I+VDHV
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHV 112
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 93/112 (83%), Gaps = 2/112 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK + ++++E L G SWH ++KDSA+++VGG+P+DL+EGD++ IF+QYG
Sbjct: 1 MNPLTQVKRTQIINQKEAILGIGEDASWHAKFKDSAYVYVGGVPFDLTEGDLLAIFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
E+V++NLVRDK TGKSKGF F+ YEDQRST+L+VDNLNG KVL R I+VDHV
Sbjct: 61 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIIKVDHV 112
>gi|307108981|gb|EFN57220.1| hypothetical protein CHLNCDRAFT_14185, partial [Chlorella
variabilis]
Length = 116
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT +KN +K+++ E+ G K SWHD++K SA++F GGLP++L+EGD++ +F+QYG
Sbjct: 1 MNPLTQIKNTQKITKAEIELGLTDKASWHDRFKHSAYVFSGGLPFELTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
E+V+++LVRDK TGKS+GF F+ YEDQRSTVL+VDNL G +V R IRV+HV++Y+
Sbjct: 61 EVVDVHLVRDKKTGKSRGFAFLAYEDQRSTVLAVDNLGGARVAGRVIRVEHVDNYR 116
>gi|395754448|ref|XP_003780626.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pongo abelii]
Length = 317
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 89/105 (84%), Gaps = 1/105 (0%)
Query: 35 WI-FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
W +GGLPY+L+EGD+IC+FSQYGEIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VD
Sbjct: 2 WFSLLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 61
Query: 94 NLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGT 138
N NG+K+ RTIRVDHV++Y+ PKD++ D+ T++L+ GC T
Sbjct: 62 NFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQLQEKGCGART 106
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 94/108 (87%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
++ I +++E+EL G K SWHD+YK+SA+I+VGGLP++L+EGD+I IFSQ+GEI+++NLV
Sbjct: 133 IREINRINERELELGVKGSWHDEYKESAYIYVGGLPFELTEGDLITIFSQWGEIMDVNLV 192
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
RDK TGKS+GF F+ YEDQRSTVL+VDN+NG +++ RT++VDH +Y+
Sbjct: 193 RDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQIIGRTLKVDHTRNYR 240
>gi|149455712|ref|XP_001516504.1| PREDICTED: hypothetical protein LOC100086370, partial
[Ornithorhynchus anatinus]
Length = 258
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 68/96 (70%), Positives = 83/96 (86%)
Query: 40 GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVK 99
GLPY+L+EGDV+C+FSQYGEIVN+NLVRDK TGKSKGF F+CYEDQRST+L+VDN NG+K
Sbjct: 1 GLPYELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGFGFLCYEDQRSTILAVDNFNGIK 60
Query: 100 VLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
+ RTIRVDHV +Y+PPKD++ D+ TK LR GC
Sbjct: 61 IKGRTIRVDHVANYRPPKDSEDVDDATKALRERGCG 96
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I K++E+EL G SWHD YKDSA+IFVGGL +L+EGDVI IFSQYGE++++NL
Sbjct: 3 VREINKINERELDLGLTASWHDDYKDSAYIFVGGLNPELTEGDVITIFSQYGEVMDVNLP 62
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNKYT 122
R K TGK+KGF F+ YEDQRSTVL+VDNLNG KVL RT+RVDHV +YK P+ D ++
Sbjct: 63 RHKDTGKTKGFGFLMYEDQRSTVLAVDNLNGAKVLERTLRVDHVKNYKQPRVKGEDGEWQ 122
Query: 123 DEETKKL 129
D E + L
Sbjct: 123 DLEDQSL 129
>gi|308806371|ref|XP_003080497.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116058957|emb|CAL54664.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 252
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 118/179 (65%), Gaps = 18/179 (10%)
Query: 1 MNPLTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT ++ +K++ +E++SG SWHDQ++ SA+++ GGLP+ L+EGDV+C+FSQ+G
Sbjct: 1 MNALTQIQRTQKINVEEVASGRDVSASWHDQFRHSAYVYAGGLPFALTEGDVLCVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
EIV++N+VR++ TGKS+GF F+CY DQRSTVL+VDNLNG V R IRV+HV+DY+
Sbjct: 61 EIVDVNVVREEETGKSRGFAFVCYADQRSTVLAVDNLNGSTVGGRIIRVEHVDDYRAKNP 120
Query: 119 NKYTDEETKKLRTIGCAPGTE----------FGSILPVKTEDIKQEKDSKPTESKDKKR 167
+ E + R CA G++ G+ PV K+E +++P D+ R
Sbjct: 121 EEKEGREVE--REWKCACGSDNFKWRDACFKCGTPRPV----TKREHEAEPEPGSDRAR 173
>gi|422295618|gb|EKU22917.1| u2 snrnp component ist3 [Nannochloropsis gaditana CCMP526]
Length = 121
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 95/117 (81%), Gaps = 3/117 (2%)
Query: 7 VKNIKKLSEQEL---SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
V+ I++L+E+EL ++G + SWH QYKDSAW+FVG LP LSEGDV+C+ SQ+GEI +L
Sbjct: 4 VREIQRLNEKELQRGTAGMEGSWHGQYKDSAWVFVGSLPSQLSEGDVLCVMSQWGEIEDL 63
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+LVRDK TGKSKGF F+ YEDQRST+L+VDN+NG+K+L RT+RVDH Y PK+ +
Sbjct: 64 HLVRDKGTGKSKGFAFLKYEDQRSTILAVDNMNGIKLLERTLRVDHKEKYSLPKETE 120
>gi|302854208|ref|XP_002958614.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
gi|300256075|gb|EFJ40351.1| hypothetical protein VOLCADRAFT_69624 [Volvox carteri f.
nagariensis]
Length = 134
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 100/131 (76%), Gaps = 6/131 (4%)
Query: 7 VKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+KN +K +++E+ +G + SWH Q+K SA++F GGL Y+L+EGD++ +FSQYGEIV+LN
Sbjct: 2 IKNTQKATKREIEAGIQDSASWHAQFKHSAYVFAGGLDYELTEGDLLAVFSQYGEIVDLN 61
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
L+R K TGKSKGF FI YEDQRST+L+VDNLNG KV+ RTIRV+HV++YK K +
Sbjct: 62 LIRHKDTGKSKGFAFIAYEDQRSTILAVDNLNGAKVVGRTIRVEHVDNYKKRK----AEV 117
Query: 125 ETKKLRTIGCA 135
KL+ GC+
Sbjct: 118 RLAKLKARGCS 128
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 113/186 (60%), Gaps = 25/186 (13%)
Query: 7 VKNIKKLSEQELSSGSKT-SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
VK I ++ +EL GS++ SWHDQYKDSA++F+GGL D++EGDVI IFSQYGEI+++NL
Sbjct: 4 VKEINAINARELDLGSQSASWHDQYKDSAYVFIGGLHVDMTEGDVITIFSQYGEIMDVNL 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK----DNK- 120
RDK TGK +GF F+ YEDQRSTVL+VDNLNG +VL RT+RVDHV +YK PK D +
Sbjct: 64 PRDKTTGKQRGFGFLMYEDQRSTVLAVDNLNGAQVLGRTLRVDHVQNYKQPKVKGEDGEM 123
Query: 121 ---------------YTDEETKKLRTIGCAPGTE----FGSILPVKTEDIKQEKDSKPTE 161
Y D E ++ AP + S L K + K K E
Sbjct: 124 EETAEQSLNAKPQMIYDDAEESDGGSVSSAPSIDPEDPMASYLLQKRREEKARSKGKDKE 183
Query: 162 SKDKKR 167
+KR
Sbjct: 184 KSKRKR 189
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
Query: 7 VKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
VK I +++E+EL G S SWHD+YKDSA+IFVGGL +L+EGDVI IFSQYGEI+++N+
Sbjct: 4 VKEINRINERELELGLSGASWHDEYKDSAYIFVGGLNRELTEGDVITIFSQYGEIMDINM 63
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
R+K TGK KGF F+ YEDQRSTVL+VDNLNG KV RT+RVDHV +YK
Sbjct: 64 PREKETGKPKGFAFVMYEDQRSTVLAVDNLNGSKVAERTLRVDHVKNYK 112
>gi|145348674|ref|XP_001418770.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579000|gb|ABO97063.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 122
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 94/116 (81%), Gaps = 2/116 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT +KN +K + +E+ SG + SWH +YK SA+++ GGL ++++EGD++ +FSQ+G
Sbjct: 1 MNALTQIKNTQKATMREIESGMGEEASWHARYKHSAYVYAGGLAFNMTEGDILAVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
E+V++NLVRD+ G+S+GF FICY DQRSTVL+VDNLNG V+ RTI+VDHV+DYK
Sbjct: 61 EVVDVNLVRDEEKGRSRGFAFICYADQRSTVLAVDNLNGATVVGRTIKVDHVDDYK 116
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 96/128 (75%), Gaps = 3/128 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD+I IFSQYGE V
Sbjct: 1 MNNIRQIQALNKRELENAISPEASWHADYRDTAYIYIGGLPYDLSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NLVRDK TGKS+GFCF+ YEDQRST L+VDNL G VL R +RVDHV YK D +
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHVR-YKRRDDEEE 119
Query: 122 TDEETKKL 129
TD K +
Sbjct: 120 TDNVAKLM 127
>gi|354473614|ref|XP_003499029.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cricetulus
griseus]
Length = 356
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 104/148 (70%), Gaps = 20/148 (13%)
Query: 27 HDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQR 86
H + K+SA + GGLPY+L+EGD+IC+FSQYGEIVN+NLVRDK TGKSKGFCF+CYEDQR
Sbjct: 41 HYEAKESA-VRTGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQR 99
Query: 87 STVLSVDNLNGVKVL--------------SRTIRVDHVNDYKPPKDNKYTDEETKKLRTI 132
STVL+VDN NG+KV S+ IRVDHV+ ++ P++++ DE T++L+
Sbjct: 100 STVLAVDNFNGIKVTAYYAGFDWIFPVYGSKDIRVDHVSSFRAPQESEDMDEVTRELQEK 159
Query: 133 GCAPGTEFGSILPVKTEDIKQEKDSKPT 160
GC T P + ++ +++D KPT
Sbjct: 160 GCGAKTP-----PSSSTEVSEDEDVKPT 182
>gi|297793411|ref|XP_002864590.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
gi|297310425|gb|EFH40849.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 98/129 (75%), Gaps = 5/129 (3%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK ++++ +EL G + SWH +YKDSA+++VG L YDL+EGD++ +F+QYG
Sbjct: 1 MNPLTMVKQTQRINAKELDLGISDEASWHAKYKDSAYVYVGELLYDLTEGDLLAVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E+V++NL RDK TGKSKGF F+ YEDQRST L+VDNLNG KVL R I+V+H Y ++
Sbjct: 61 EVVDVNLARDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAKVLGRIIKVEHCGKYSKREE 120
Query: 119 NKYTDEETK 127
+ DEETK
Sbjct: 121 D---DEETK 126
>gi|301113430|ref|XP_002998485.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
gi|262111786|gb|EEY69838.1| U2 snRNP component IST3 [Phytophthora infestans T30-4]
Length = 233
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 91/117 (77%), Gaps = 2/117 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSKTS--WHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ V I++L+E+EL S WH +Y +SAW+FVGGLP++LSEGDV+C+ SQ+GEI
Sbjct: 1 MNVVAEIQRLNERELELNVPLSGSWHQKYSESAWVFVGGLPFELSEGDVLCVLSQFGEIE 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+++LVRD TGKSKGF FI +EDQRST+L+VDNLNG K+L R +RVDHV YK PK+
Sbjct: 61 DIHLVRDGKTGKSKGFVFIKFEDQRSTILAVDNLNGFKLLERVLRVDHVLKYKLPKE 117
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 4 LTNVKNIKKLSEQELSSG-SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVN 62
+ VK+I+ L+E+EL S SWHDQYK SA++++GGL L+EGDVI I SQ+GEI +
Sbjct: 1 MNKVKHIQSLNEKELQLNLSDASWHDQYKHSAYVYIGGLVTGLTEGDVITILSQFGEIAD 60
Query: 63 LNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
+N+ +DK TGKS+GF F+ YEDQRSTVL+VDNLNG VL RT+RVDHV+ Y PK
Sbjct: 61 INMPKDKATGKSRGFAFVMYEDQRSTVLAVDNLNGSTVLGRTLRVDHVDKYSQPK 115
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 92/110 (83%)
Query: 5 TNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+ +K I++++ +EL G K SWHD+YKDSA++F+GGL Y+++EGDVI +FSQ+GE+V++N
Sbjct: 1 STIKEIERINLRELELGVKGSWHDEYKDSAYVFIGGLSYEMTEGDVIIVFSQWGEVVDIN 60
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
L RDK TGK++GF F+ YEDQRSTVL+VDN+NG ++L RTIRVDH YK
Sbjct: 61 LPRDKETGKTRGFGFLMYEDQRSTVLAVDNMNGAQILGRTIRVDHCKSYK 110
>gi|71021267|ref|XP_760864.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
gi|46100960|gb|EAK86193.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
Length = 385
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 134/256 (52%), Gaps = 68/256 (26%)
Query: 7 VKNIKKLSEQELSSGSKT---SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
V+ I ++++ EL ++ SWH QY DSA+IF+GGLPYDL+EGDV+ IFSQYGE+V++
Sbjct: 4 VREISRINQAELDIAIRSPSASWHQQYNDSAYIFIGGLPYDLTEGDVVTIFSQYGEVVDV 63
Query: 64 NLVRDKIT-----------------------------GKSKGFCFICYEDQRSTVLSVDN 94
NL R T GK +GF F+ Y+DQRSTVL+VDN
Sbjct: 64 NLPRANPTSTCTHANNNDNDDRNRAASSSQQSKPLAKGKHRGFGFLMYQDQRSTVLAVDN 123
Query: 95 LNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKK----LRTIGCAP-------------- 136
LNG +VL RT+RVDHV YK P K TDE+ + ++++ AP
Sbjct: 124 LNGAQVLGRTLRVDHVASYKQP---KVTDEQGNRVEADVKSLNAAPVELDVRDNRVHDLA 180
Query: 137 -------GTEFGSILPVKTEDIKQEKDSKPTESKDKKRKHKEKKVKKEKKKKKKRKKSSS 189
+ + + + P + +D+KR+ K+++ + ++ ++R+K +S
Sbjct: 181 QDDDADLQDPMAAYFQRRNREQNLDLTHDPIDERDEKRRRKQERARIRAERDERRRKHAS 240
Query: 190 SS--------SSSSSD 197
+S SSSSSD
Sbjct: 241 ASGTDPRDHASSSSSD 256
>gi|348670163|gb|EGZ09985.1| hypothetical protein PHYSODRAFT_262195 [Phytophthora sojae]
Length = 228
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 113/176 (64%), Gaps = 7/176 (3%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ V I++L+E+EL SWH +Y++SAW++VGGLP++LSEGDV+C+ SQ+GE+
Sbjct: 1 MNVVAEIQRLNERELELNVPLSASWHQKYRESAWVYVGGLPFELSEGDVLCVLSQFGEVE 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK---- 117
+++LVRD TGK KGF F+ +EDQRSTVL+VDNLNG ++L R +RVDHV YK PK
Sbjct: 61 DIHLVRDGKTGKPKGFAFLKFEDQRSTVLAVDNLNGFRLLDRVLRVDHVLKYKLPKELQE 120
Query: 118 DNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKKRKHKEKK 173
D+ D+E + R G PG + D+ + D + E + K+ + E K
Sbjct: 121 DSDSEDDEQTERRPRGL-PGHAYEGKELASDFDLHKGVDKRRQEQRGKEEREAESK 175
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 95/128 (74%), Gaps = 3/128 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV YK D +
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHVR-YKRRDDEEE 119
Query: 122 TDEETKKL 129
TD K +
Sbjct: 120 TDNVAKLM 127
>gi|145552619|ref|XP_001461985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429822|emb|CAK94612.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 88/111 (79%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
K IKKL+E L + T+WHD+Y S++IF+ L Y ++EGD+ +FSQYGEIV+++LVR
Sbjct: 3 KTIKKLNEVALDNIQATTWHDEYNKSSYIFIANLNYAMNEGDIAIVFSQYGEIVDVHLVR 62
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
DKITGKSKGFCF+ YEDQRST+L+VDN N ++ R +RVDHV ++KPPK+
Sbjct: 63 DKITGKSKGFCFLAYEDQRSTILAVDNFNHAEICGRLLRVDHVREFKPPKE 113
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 93/122 (76%), Gaps = 3/122 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNNIRQIQALNKRELENAIPPEASWHADYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV YK D +
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHVR-YKRRDDEEE 119
Query: 122 TD 123
TD
Sbjct: 120 TD 121
>gi|328876029|gb|EGG24393.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 280
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 90/112 (80%), Gaps = 2/112 (1%)
Query: 7 VKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
V+ I++++ E++SG+ +SWH+ Y S WIF GG+P+DL+EGDV+ +FSQYGE+ +
Sbjct: 4 VREIQRINRNEMTSGASETSSWHEDYSHSCWIFAGGMPFDLNEGDVVTVFSQYGEVDEYD 63
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
LVR+K TGKS+GF FI Y DQ+ST+L+VDNLNGVK+L RTIRVDHV DY+ P
Sbjct: 64 LVRNKETGKSQGFAFIKYMDQKSTILAVDNLNGVKILGRTIRVDHVKDYRKP 115
>gi|403220621|dbj|BAM38754.1| RNA-binding motif protein, X-linked 2 [Theileria orientalis strain
Shintoku]
Length = 291
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 90/125 (72%), Gaps = 4/125 (3%)
Query: 2 NPLTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
P N I +LSE EL G+ + SWH QYKDS +IF+GGL ++EGD+I +FSQ+G+
Sbjct: 5 GPAANTNAISRLSELELKRGTLGEGSWHHQYKDSCYIFIGGLDTRMTEGDIIIVFSQFGD 64
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
+++NL RDKITGKS G+CF+ Y DQRST+L+VDN NG +L R IRVDHV DYK P +
Sbjct: 65 PIDINLKRDKITGKSLGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVMDYKAPVE- 123
Query: 120 KYTDE 124
Y DE
Sbjct: 124 -YEDE 127
>gi|19113271|ref|NP_596479.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe 972h-]
gi|74676178|sp|O94290.1|IST3_SCHPO RecName: Full=U2 snRNP component ist3; AltName: Full=Complexed with
cdc5 protein 29; AltName: Full=RNA-binding protein cwf29
gi|3850101|emb|CAA21890.1| RNA-binding protein Cwf29 [Schizosaccharomyces pombe]
Length = 217
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 99/145 (68%), Gaps = 9/145 (6%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ +++ I++L+EQEL +SWH Y DSA+I++G L +DL+E D++C+FS++GE V++
Sbjct: 1 MNSIRQIERLNEQELDKPFSSSWHQDYSDSAYIYIGNLDFDLNEDDILCVFSEFGEPVDI 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
NLVRDK TGKSKGF F+ YEDQRSTVL+VDN+ VK+L R +RVDHV YK P+
Sbjct: 61 NLVRDKETGKSKGFAFLKYEDQRSTVLAVDNMTNVKLLDRLVRVDHVASYKVPQ------ 114
Query: 124 EETKKLRTIGCAPGTEFGSILPVKT 148
K+ P E GS L V T
Sbjct: 115 ---KEKEPANLVPLGESGSSLSVST 136
>gi|156096969|ref|XP_001614518.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803392|gb|EDL44791.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 299
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 108/151 (71%), Gaps = 4/151 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSS-GS-KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +++++KL+E EL + GS +TSWHDQYKDS++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGSEQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRDK TGKSKG+CF+ YEDQRSTVL+VDN NG K+L R + VDH+ +Y+ P+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYRLPQ- 119
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
KY +++ + A G G +++E
Sbjct: 120 -KYANDDGQNEYKPTGAEGQGIGVYNVIESE 149
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 89/114 (78%), Gaps = 3/114 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ I+KL+++EL +G SWH + D+A++++GGLPY+LSEGD+I IFSQ+GE V
Sbjct: 1 MNNIRAIEKLNQRELEAGIPLSASWHTDWSDTAYVYIGGLPYELSEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
++NL+RDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDH YKP
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTNLAVDNLGGATILGRIIRVDHTR-YKP 113
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGDV+ IFSQYGE V
Sbjct: 1 MNSIRQIQSLNKRELENAVPPEASWHADYRDTAYIYIGGLPYDLSEGDVVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRMLRVDHV 109
>gi|443900181|dbj|GAC77508.1| predicted RNA-binding protein [Pseudozyma antarctica T-34]
Length = 318
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 91/139 (65%), Gaps = 28/139 (20%)
Query: 7 VKNIKKLSEQELSSGSK---TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
V+ I +++ EL K SWH+QY+DSA+IF+GGLPYDL+EGDVI IFSQYGE+V++
Sbjct: 4 VREISRINAAELDIAIKNPSASWHEQYRDSAYIFIGGLPYDLTEGDVIAIFSQYGEVVDV 63
Query: 64 NLVR---------DKIT----------------GKSKGFCFICYEDQRSTVLSVDNLNGV 98
NL R DK + GK +GF F+ YEDQRSTVL+VDNLNG
Sbjct: 64 NLPRPAQQPSNSEDKQSGSASTSRDAAQPRQGKGKHRGFGFLMYEDQRSTVLAVDNLNGA 123
Query: 99 KVLSRTIRVDHVNDYKPPK 117
+VL RT+RVDHV YK PK
Sbjct: 124 QVLGRTLRVDHVASYKQPK 142
>gi|84999532|ref|XP_954487.1| RNA-binding protein [Theileria annulata]
gi|65305485|emb|CAI73810.1| RNA-binding protein, putative [Theileria annulata]
Length = 292
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 7/133 (5%)
Query: 3 PLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
P N I +LSE EL G + SWH+QYKDS +IF+GGL + ++EGD+I +FSQ+GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP---K 117
+++NL RDK TGKS G+CF+ Y+DQRST+L+VDN NG +L R IRVDHV DY P +
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDYSAPVVYE 125
Query: 118 DNKYTDEETKKLR 130
D DEE K+R
Sbjct: 126 DE--VDEEGNKIR 136
>gi|255080758|ref|XP_002503952.1| predicted protein [Micromonas sp. RCC299]
gi|226519219|gb|ACO65210.1| predicted protein [Micromonas sp. RCC299]
Length = 90
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 81/90 (90%)
Query: 25 SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYED 84
SWH ++KDSA+IF GGL +DL+EGD++ +FSQYGEIV++NLVR++ TGKS+GF FICYED
Sbjct: 1 SWHAKFKDSAYIFAGGLSFDLTEGDILAVFSQYGEIVDVNLVRNEETGKSRGFAFICYED 60
Query: 85 QRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
QRSTVL+VDNLNG KVL RTI+V+HV DY+
Sbjct: 61 QRSTVLAVDNLNGAKVLGRTIKVEHVEDYR 90
>gi|303272303|ref|XP_003055513.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463487|gb|EEH60765.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 104
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 82/97 (84%), Gaps = 2/97 (2%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
LS G+ SWH +YK SA++F GGL +DL+EGDV+ +FSQYGEIV++NLVR + TGKS+GF
Sbjct: 6 LSEGA--SWHAKYKHSAYVFAGGLSFDLTEGDVLAVFSQYGEIVDVNLVRHEDTGKSRGF 63
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
FICYEDQRSTVL+VDNLNG KVL R I+VDHV DYK
Sbjct: 64 AFICYEDQRSTVLAVDNLNGAKVLGRIIKVDHVEDYK 100
>gi|164657279|ref|XP_001729766.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
gi|159103659|gb|EDP42552.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
Length = 357
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 94/133 (70%), Gaps = 22/133 (16%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +V+ I++++E+EL G SWHDQYKDSA+I+VGGLPYDL+EGDV+ IFSQYGEIV
Sbjct: 1 MNSVREIQRINERELELGLHGSGSWHDQYKDSAYIYVGGLPYDLTEGDVLTIFSQYGEIV 60
Query: 62 NLNLVRD--------------------KITGKSKGFCFICYEDQRSTVLSVDNLNGVKVL 101
N++L + K G+++GF F+ YEDQRSTVL+VDNLNG +VL
Sbjct: 61 NIHLPKPREEPGPSDKDRRAHDPQESKKSHGRNRGFGFLMYEDQRSTVLAVDNLNGSQVL 120
Query: 102 SRTIRVDHVNDYK 114
RT+RVDHV ++K
Sbjct: 121 GRTLRVDHVANFK 133
>gi|118379871|ref|XP_001023101.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila]
gi|89304868|gb|EAS02856.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila
SB210]
Length = 1019
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 91/117 (77%), Gaps = 2/117 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSKT--SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N +K+ E+EL G +T SWH+ YKDSA+IF+GGL YDL+EGD+ +FSQ+G+IV
Sbjct: 741 MNNSTKVKQYIEKELKQGVETGQSWHNDYKDSAYIFIGGLNYDLNEGDISTVFSQWGQIV 800
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+L LVRDK TG+SKG+CF+ YEDQRST+L+V+N N + + R I V+HV+ YKPP++
Sbjct: 801 DLRLVRDKKTGRSKGYCFLAYEDQRSTILAVENFNQINLCGRIIGVNHVSKYKPPRE 857
>gi|111226498|ref|XP_001134546.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970613|gb|EAS66863.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 348
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
M+ + V+NI K E L+ SWH Y S +I+VGGL YDL+EGDVI IFSQYGEI
Sbjct: 1 MHRIREVQNINK-KELNLNISESASWHADYSHSPYIYVGGLNYDLNEGDVIAIFSQYGEI 59
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
NLVR+K TG+S+GFCF+ Y+ Q+STVL+VDNLNG+ +L +TI+VDHV DYK PK N
Sbjct: 60 SECNLVRNKETGRSQGFCFVGYDQQKSTVLAVDNLNGINLLGKTIKVDHVKDYKRPKKN 118
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 124/217 (57%), Gaps = 34/217 (15%)
Query: 3 PLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
P N I +LSE EL G + SWH+QYKDS +IF+GGL + ++EGD+I +FSQ+GE
Sbjct: 6 PAANTNAIHRLSELELKKGIIGEGSWHNQYKDSCYIFIGGLDHRMTEGDIIIVFSQFGEP 65
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP--KD 118
+++NL RDK TGKS G+CF+ Y+DQRST+L+VDN NG +L R IRVDHV DY P D
Sbjct: 66 IDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVMDYSAPVVYD 125
Query: 119 NKYTDEETK---KLRTIGCAPGTEFGSILPVKTEDIKQEKDSK-----PTESKDKKRKHK 170
+K DE K + + G A G G +TE + +E SK P + D+ K
Sbjct: 126 DKVDDEGNKIRKEYKPTG-AEGLGLGKYYVTETERLLRETSSKTAKHEPVQQMDEDEKWA 184
Query: 171 ---EKKVKKE------------------KKKKKKRKK 186
E+ +KKE KK+ K+R K
Sbjct: 185 LEFEQMIKKENLESDDHPKENKEDTVSVKKEDKERDK 221
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ ++ L+++EL + SWH Y+D+A+I++GGLP+DLSEGD++ IFSQYGE V
Sbjct: 1 MNNIRQVQALNKRELEHAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDH
Sbjct: 61 HINLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHT 109
>gi|389583407|dbj|GAB66142.1| RNA-binding protein [Plasmodium cynomolgi strain B]
Length = 208
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +++++KL+E EL + +TSWHDQYKDS++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQTSWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRDK TGKSKG+CF+ YEDQRSTVL+VDN NG K+L R + VDH+ +Y+ P+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYRLPQ- 119
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
KY +++ K A G G +++E
Sbjct: 120 -KYANDDGKNEYKPTGAEGQGIGVYNVIESE 149
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ +++L+++EL + + SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G VL R IRVDHV
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV 109
>gi|221055439|ref|XP_002258858.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808928|emb|CAQ39631.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 287
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +++++KL+E EL + + SWHDQYKDS++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIRSVEKLNEAELKNIGNDQASWHDQYKDSSYIYIGNLDSRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRDK TGKSKG+CF+ YEDQRSTVL+VDN NG K+L R + VDH+ +Y+ P+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNFNGYKLLDRPLVVDHILNYRLPQ- 119
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
KY +++ + A G G +++E
Sbjct: 120 -KYANDDGQSEYKPSGAEGQGIGVHNVIESE 149
>gi|124505047|ref|XP_001351265.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|4494008|emb|CAB39067.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 309
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M ++NI+KL+E EL + + +SWHDQY+DS++I++G L L+EGD++ +FSQYG
Sbjct: 1 MGLFDKIRNIEKLNEAELKNIGNNDSSWHDQYRDSSYIYIGNLDNRLTEGDIVIVFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRD TGKSKG+CF+ Y DQRST+L+VDN NG K+L R + VDH+ +Y+ PK
Sbjct: 61 EPIDVNLVRDNETGKSKGYCFLSYADQRSTILAVDNFNGYKLLERPLVVDHILNYRLPK- 119
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
KY + K A G G V++E
Sbjct: 120 -KYLKDADKNEYKPTGAEGQGIGVYNVVESE 149
>gi|225683370|gb|EEH21654.1| U2 snRNP component IST3 [Paracoccidioides brasiliensis Pb03]
Length = 280
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ ++ L+++EL + + SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDHV
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV 109
>gi|226286984|gb|EEH42497.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 280
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ ++ L+++EL + + SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDHV
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV 109
>gi|295666436|ref|XP_002793768.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277421|gb|EEH32987.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 280
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ ++ L+++EL + + SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQALNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDHV
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHV 109
>gi|325188529|emb|CCA23063.1| carbohydratebinding protein putative [Albugo laibachii Nc14]
Length = 899
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/158 (47%), Positives = 110/158 (69%), Gaps = 11/158 (6%)
Query: 7 VKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+ IK+++E+EL G K SWH +YKDSAW+++GGL ++L+EGDVIC+ SQ+GEI ++N
Sbjct: 617 IAEIKRINERELELGVPFKGSWHQKYKDSAWVYIGGLSFELTEGDVICVMSQFGEIEDIN 676
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
L+RD TGKSKGF F+ YE+Q+STVL+VDNLNG ++L R +RVDHV Y+ PK+++ +E
Sbjct: 677 LIRDPKTGKSKGFAFLKYENQKSTVLAVDNLNGYRLLDRLLRVDHVLKYRLPKESQMKEE 736
Query: 125 ------ETKKLRTIGCAPGTEFGSILPVKTEDIKQEKD 156
E K+R + PG + + DI Q ++
Sbjct: 737 LLEQGGEDDKMRGL---PGHAYEGVELANGFDINQGQN 771
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGDV+ IFSQ+GE
Sbjct: 1 MQSIRQIQELNKRELEAGVSPEASWHTDYRDTAYIYIGGLPFELSEGDVVTIFSQFGEPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+NL+RDK TGKSKGF F+ YEDQRST L+VDNL G ++ RT++VDH YK D K
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGTVIMGRTLKVDHTR-YKKKDDEK 118
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +V+NI++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSVRNIQQLNKRELEAGINPEASWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RDK TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP D
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGATIMDRVIRVDHAR-YKPRDDEDM 119
Query: 122 TDEETKKLRTIGCAPGTE 139
D +L PG E
Sbjct: 120 RDNTMGEL---DLDPGQE 134
>gi|261202032|ref|XP_002628230.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590327|gb|EEQ72908.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 258
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ +++L+++EL + + SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQELNKKELENVVPPEASWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G VL R IRVDHV
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVLGRMIRVDHV 109
>gi|156086052|ref|XP_001610435.1| RNA-binding protein [Babesia bovis T2Bo]
gi|154797688|gb|EDO06867.1| RNA-binding protein, putative [Babesia bovis]
Length = 248
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 2 NPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
P N+ I +LSE EL G ++SWH++YKDS +IF+GGL ++EGD+I +FSQ+G+
Sbjct: 5 GPSANISAISRLSEFELEKGIIGESSWHNRYKDSCYIFIGGLHRRMTEGDIIIVFSQFGD 64
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
++++L RDK TG S+G+CF+ Y DQRST+L+VDN NG +L R IRVDHV DYK P +
Sbjct: 65 PIDIHLKRDKKTGASRGYCFLGYRDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAPVEY 124
Query: 120 K-YTDEETKKLRTIGCAPGTE 139
+ D+E K+R A G E
Sbjct: 125 EDEVDDEGNKIRKEYKASGAE 145
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+DLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHV 109
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 86/108 (79%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLP+DLSEGD++ IFSQYGE V
Sbjct: 1 MNSIRQIQALNKRELENAVTPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++NL+RDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH
Sbjct: 61 HVNLIRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDH 108
>gi|384245417|gb|EIE18911.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 160
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 16/130 (12%)
Query: 1 MNPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT +KN +K ++ E+ SG SWH ++K SA+IF GGL Y L+EGD++ +FSQYG
Sbjct: 1 MNPLTQIKNTQKATKLEIVSGISDSASWHAKFKHSAYIFAGGLAYTLTEGDLLAVFSQYG 60
Query: 59 EIVNLNLVR--------------DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRT 104
EIV++NLVR DK TGKS+GF F+ YEDQRSTVL+VDNL+G KV R
Sbjct: 61 EIVDVNLVRQGSSQPISCLAIPLDKETGKSRGFAFLAYEDQRSTVLAVDNLSGAKVAGRV 120
Query: 105 IRVDHVNDYK 114
+ V+HV++YK
Sbjct: 121 VTVNHVDNYK 130
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 93/123 (75%), Gaps = 2/123 (1%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +KN+++L+++EL + + SWH +YKDSA+I++GGL Y ++EGD+ +FSQ+GE+V
Sbjct: 1 MNRIKNVERLTQRELDTLTPYHASWHYEYKDSAYIYIGGLNYRMNEGDIAIVFSQFGEVV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RD+ TGKSKGF F+ YEDQ+STVL+VDNLNG+ + R I VDHV YK P++
Sbjct: 61 DCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRLISVDHVMQYKIPREYLE 120
Query: 122 TDE 124
TD+
Sbjct: 121 TDQ 123
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ ++ L+++EL + SWH Y+D+A+I++GGLP+DLSEGDVI IFSQYGE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDHA 109
>gi|343426144|emb|CBQ69675.1| related to rna binding motif protein [Sporisorium reilianum SRZ2]
Length = 368
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 97/160 (60%), Gaps = 33/160 (20%)
Query: 7 VKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
V+ I ++++ EL + SWH QY DSA+IF+GGLPYDL+EGDVI IFSQYGE+V++
Sbjct: 4 VREISRINQTELDIAINNPSASWHQQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEVVDV 63
Query: 64 NLVRDKIT-----------------------GKSKGFCFICYEDQRSTVLSVDNLNGVKV 100
NL R GK +GF F+ YEDQRSTVL+VDNLNG +V
Sbjct: 64 NLPRANPNANDKGDGAASSSSQQQQPKPVGKGKHRGFGFLMYEDQRSTVLAVDNLNGAQV 123
Query: 101 LSRTIRVDHVNDYKPPKDNKYTDEETKK----LRTIGCAP 136
L RT+RVDHV YK P K TDE+ + +++ AP
Sbjct: 124 LGRTLRVDHVASYKQP---KVTDEDGNRVEADVKSFNAAP 160
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/113 (61%), Positives = 90/113 (79%), Gaps = 2/113 (1%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNP T VK + ++ +E LS G SWH +YKDSA+IFVGG+P+DL+EGD++ +F+QYG
Sbjct: 1 MNPPTLVKRTQNINAREAALSIGDHASWHTKYKDSAYIFVGGIPFDLTEGDLLPVFAQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
E+V++NLVRDK TGKSK F F+ YEDQRS L+VDNLNG +VL R I+VDHV+
Sbjct: 61 EVVDVNLVRDKGTGKSKDFAFLAYEDQRSADLAVDNLNGAQVLGRIIKVDHVD 113
>gi|119183786|ref|XP_001242884.1| hypothetical protein CIMG_06780 [Coccidioides immitis RS]
gi|392865790|gb|EAS31617.2| U2 snRNP component IST3 [Coccidioides immitis RS]
Length = 269
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD++ IFSQ+GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH+
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM 109
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLP+DLSEGD++ IFSQYGE V
Sbjct: 1 MNSIRQIQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH
Sbjct: 61 HVNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRVLRVDHT 109
>gi|303320035|ref|XP_003070017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109703|gb|EER27872.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320034356|gb|EFW16301.1| U2 snRNP component IST3 [Coccidioides posadasii str. Silveira]
Length = 271
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD++ IFSQ+GE V
Sbjct: 1 MNSIRQIQALNKRELETAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH+
Sbjct: 61 HLNLVRDKDTGKSKGFAFLKYEDQRSTDLAVDNLCGATVMGRLLRVDHM 109
>gi|224009920|ref|XP_002293918.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970590|gb|EED88927.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 92/133 (69%), Gaps = 8/133 (6%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MN + ++ I L ++ + + SWHD+YKDSAWI G LP +L+EGDV+CI SQYGEI
Sbjct: 1 MNVVNEIQRINDLELEKGLTHTSASWHDKYKDSAWIHAGNLPLNLTEGDVLCILSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD-- 118
+++LVRDK +GKSKGF F+ YED RS VL+VDNL G VL RT+RVDHV +Y+ PK
Sbjct: 61 DDIHLVRDKDSGKSKGFAFVKYEDARSCVLAVDNLCGSMVLGRTLRVDHVENYRLPKHIQ 120
Query: 119 ------NKYTDEE 125
NK DEE
Sbjct: 121 EKEDGLNKEGDEE 133
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Query: 7 VKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
++ I+ ++++EL G K SWH Y S W++VGG+P++++EGD+I + SQYGEI + N
Sbjct: 4 IREIQSINKRELERGVSDKASWHQDYAHSPWVYVGGMPFEMNEGDIIAVMSQYGEIEDCN 63
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
+VR+K TGKS+GFCFI YEDQRST L+VDNL G ++ R +RVDHV DY+ P
Sbjct: 64 MVRNKETGKSQGFCFIKYEDQRSTNLAVDNLTGYNIMGRLLRVDHVKDYRRP 115
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+DLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQIQSLNKRELENAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV YK D +
Sbjct: 61 HVNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGSTVLGRILRVDHVR-YKRRDDEEE 119
Query: 122 TDEETKKL 129
D K +
Sbjct: 120 GDNVAKLM 127
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I+ L+++EL + + SWH Y+D+A+I++GGLPYDLSEGD++ IFSQ+GE V
Sbjct: 1 MNSIRQIQALNKRELENAVSPEASWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G ++ R +RVDH+
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLCGANIMGRLLRVDHM 109
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
Query: 4 LTNVKNIKKLSEQELS----SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGE 59
+ K+I + +E+EL G +SWHD+Y S++IFVG LP++L+EGD++ +F QYG
Sbjct: 1 MQTTKSILQANEKELDLGHIGGYGSSWHDKYSHSSYIFVGNLPFELTEGDLLVVFEQYGH 60
Query: 60 IVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
I +++LVRD+ TGKSKGF FI YEDQRST+L+VDN NG +L RT+RVDHV YK D+
Sbjct: 61 IADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVDNFNGTVLLGRTLRVDHVAHYKKKVDD 120
Query: 120 KYTDEE 125
EE
Sbjct: 121 SVVQEE 126
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ ++ L+++EL + SWH Y+D+A+I++GGLP+DLSEGD+I IFSQYGE V
Sbjct: 1 MNSIRQVQALNKRELEHAIPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKSKGF F+ YEDQRST L+VDNL G V+ R +RVDH
Sbjct: 61 HVNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATVMGRLLRVDHA 109
>gi|330800733|ref|XP_003288388.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
gi|325081570|gb|EGC35081.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
Length = 121
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ V+ I+ ++++ELS SWH Y S +I+VGGL +DL+EGD+I IFSQYGEI
Sbjct: 1 MHRVREIQGINQKELSLNINDNASWHADYSHSPYIYVGGLNFDLTEGDIISIFSQYGEIS 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
NLVR+K TGKS+GFCFI Y++Q+STVL+VDN NG+KVL +TI+VDHV DYK PK N
Sbjct: 61 ECNLVRNKETGKSQGFCFIGYDNQKSTVLAVDNFNGIKVLGKTIKVDHVKDYKRPKKN 118
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 107/152 (70%), Gaps = 6/152 (3%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKT--SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +K+I+KL+E EL + T SWHDQYK+S++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIKSIEKLNETELKNLGTTNASWHDQYKESSYIYIGNLDNRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRDK TGKSKG+CF+ YEDQRST+L+VDN NG K+L + + VDH+ +Y+ P+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYRLPQ- 119
Query: 119 NKYTD-EETKKLRTIGCAPGTEFGSILPVKTE 149
KY + +E K + G A G G V++E
Sbjct: 120 -KYMENDEIDKYKPTG-AEGQGIGVYNVVESE 149
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 73/87 (83%)
Query: 24 TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
+SWH Y+D+A+I++G LPYDLSEGD++ IFSQYGE V+LNLVRDK TGKSKGF F+ YE
Sbjct: 3 SSWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYE 62
Query: 84 DQRSTVLSVDNLNGVKVLSRTIRVDHV 110
DQRST L+VDNL G VL R IRVDHV
Sbjct: 63 DQRSTDLAVDNLGGATVLGRMIRVDHV 89
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKRELENAVSPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M + ++ ++ L+++EL + + SWH Y+D+A+I++G LP DLSEGD++ IFSQYG
Sbjct: 1 MAGMNAIRQLQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E V+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDH YK ++
Sbjct: 61 EPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHAR-YKRKEE 119
Query: 119 NKYTDEETKKLRTIGCAPGTEFGSILPVKTEDI--KQEKDSKPTESKDKKRKHKEKKVKK 176
D + + E P+K I K+E+ +K E +K+++H+ +K
Sbjct: 120 EGLED----NVAAMTVGETEEHDDEDPMKEYLIQEKREEVAKALERLNKRKEHRSDGTEK 175
Query: 177 EKK 179
E K
Sbjct: 176 EDK 178
>gi|313224020|emb|CBY43539.1| unnamed protein product [Oikopleura dioica]
Length = 277
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 82/106 (77%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
SAWI+ G L Y L+EGD++ +FSQ+GEI N+NLVRD+ TG SKGFCFICYEDQRST+L+V
Sbjct: 1 SAWIYAGNLSYKLTEGDILAVFSQFGEISNVNLVRDRETGTSKGFCFICYEDQRSTILAV 60
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGT 138
DN NG+++ +R +RVDHV +YK PK + + E KKL+ G P T
Sbjct: 61 DNFNGMELCNRPVRVDHVEEYKVPKIHDDMEPEIKKLKIEGVGPKT 106
>gi|440634763|gb|ELR04682.1| hypothetical protein GMDG_01540 [Geomyces destructans 20631-21]
Length = 256
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ +++L+ +EL +G + SWH YKD+A+I++GGLP+ LSEGD+I IFSQYGE
Sbjct: 1 MNSIRQVQELNRRELENGVSPEASWHSDYKDTAYIYIGGLPFQLSEGDIITIFSQYGEPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+NLVRDK TG+SKGF F+ YEDQRST L+VDNL G K+++R +RVDH
Sbjct: 61 FINLVRDKETGESKGFAFLKYEDQRSTDLAVDNLGGTKIMNRVLRVDHT 109
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ L+ QE+ +G SWH Y+ +A++F+GGLPY+LSEGD+I IFSQYGE V
Sbjct: 1 MNQIRSTLALTRQEIDNGIPDSASWHKDYRHTAYVFIGGLPYELSEGDIIAIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
+L+L RDK TGKS+GF ++ YEDQRST L+VDNL G VL RTIRVDH +YK
Sbjct: 61 HLHLARDKDTGKSRGFGWLKYEDQRSTNLAVDNLTGAVVLGRTIRVDHA-EYK 112
>gi|410084038|ref|XP_003959596.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
gi|372466188|emb|CCF60461.1| hypothetical protein KAFR_0K01050 [Kazachstania africana CBS 2517]
Length = 154
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 96/130 (73%), Gaps = 5/130 (3%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +++IKK+SE EL +G S SWH+ YKD A++F+GGL DL+EGD++ IFSQYG
Sbjct: 1 MNQIRSIKKISENELHNGILSSDLSWHNDYKDQAYVFIGGLNKDLTEGDILTIFSQYGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V++ L RDK +G+SKGF F+ YEDQRSTVL++DNLNG K+ R I+VDH Y+P D+K
Sbjct: 61 VDIYLARDKYSGESKGFAFLKYEDQRSTVLAIDNLNGSKIAGRIIQVDHAF-YEPRDDSK 119
Query: 121 -YTDEETKKL 129
YTD K+L
Sbjct: 120 EYTDAVRKEL 129
>gi|323456906|gb|EGB12772.1| hypothetical protein AURANDRAFT_19053, partial [Aureococcus
anophagefferens]
Length = 120
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 2/112 (1%)
Query: 7 VKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+ ++KL+E+EL G ++ SWH +YKDSAW++VGGL DLSEGD+IC+ SQ+GEI + N
Sbjct: 1 MAQVQKLNERELELGISAEASWHAKYKDSAWVYVGGLSTDLSEGDIICVLSQWGEIEDFN 60
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
RDK TGK +G+C+ YEDQRST+L+VDN NG +LSRT+RVDH YK P
Sbjct: 61 YPRDKKTGKPRGWCWAKYEDQRSTILAVDNGNGASLLSRTLRVDHCEKYKLP 112
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|401406458|ref|XP_003882678.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
gi|325117094|emb|CBZ52646.1| hypothetical protein NCLIV_024340 [Neospora caninum Liverpool]
Length = 279
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
Query: 5 TNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVN 62
N++ + KL+E EL + SWH Y++S++IF+GGL L+EGD+I +FSQ+GE V+
Sbjct: 18 ANIQAVWKLNELELKHNLTGEASWHWTYRNSSYIFIGGLDVRLTEGDIIIVFSQWGEPVD 77
Query: 63 LNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++LVRD+ TG KGFCF+ YEDQRST+L+VDN NG+K+L+ T+RVDH +Y+PP+
Sbjct: 78 IHLVRDRKTGVPKGFCFLAYEDQRSTILAVDNANGMKLLNSTLRVDHCKNYRPPR 132
>gi|412991371|emb|CCO16216.1| RNA-binding motif protein, X-linked 2 [Bathycoccus prasinos]
Length = 336
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
Query: 1 MNPLTNVKNIK--KLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MN LT +KN + L E EL SWH +YK SA++FVGG+ +L+EGDV+ I SQYG
Sbjct: 63 MNVLTQIKNQQDASLREIELGLPESASWHAKYKHSAYVFVGGIHSELTEGDVLAILSQYG 122
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
EIV++ + RD+ TGKSKGF F+CY DQRST+++VDNLNG KVL R +RVDH DY+
Sbjct: 123 EIVDVFVPRDEKTGKSKGFAFVCYLDQRSTIIAVDNLNGSKVLGRILRVDHCEDYR 178
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A++++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKKELENAVSPEASWHADYRDTAYVYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ ++ L+++EL + + SWH Y+D+A+I++G LP DLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDH
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHA 109
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ ++ L+++EL + + SWH Y+D+A+I++G LP DLSEGD++ IFSQYGE V
Sbjct: 1 MNAIRQVQALNKRELENVVPPEASWHADYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKSKGF F+ YEDQRST L+VDNL G +L R IRVDH
Sbjct: 61 HLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGATILGRMIRVDHA 109
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 84/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ + L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYGE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NL+RDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDH
Sbjct: 61 HVNLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRILRVDHA 109
>gi|429328603|gb|AFZ80363.1| hypothetical protein BEWA_032160 [Babesia equi]
Length = 291
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 90/116 (77%), Gaps = 2/116 (1%)
Query: 3 PLTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
P N+ I++LSE EL +G+ ++SWH++YKDS +I++GGL ++EGD+I +FSQ+GE
Sbjct: 6 PGANISAIQRLSELELQTGAIGESSWHNRYKDSCYIYIGGLDKRMTEGDIIIVFSQFGEP 65
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
+++NL R+ TG+S G+CF+ Y+DQRST+L+VDN NG +L R IRVDHV DYK P
Sbjct: 66 IDINLKRNGKTGESLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIRVDHVLDYKAP 121
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RDK TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP D
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDHAR-YKPKDDEDM 119
Query: 122 TDEETKKLRTIGCAPGTE 139
D +L PG E
Sbjct: 120 RDNTMGEL---DVDPGVE 134
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 84/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ + L+++EL + + SWH Y+D+A+I++GGLP+DLSEGD+I IFSQYGE V
Sbjct: 1 MNAIRQTQALNKRELENAVPPEASWHADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+++L+RDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDH
Sbjct: 61 HVDLIRDKETGKSRGFAFLKYEDQRSTDLAVDNLTGATVLGRVLRVDHA 109
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 84/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+ +EL +G SWH Y+D+A+I++GGLP++LSEGD++ IFSQYGE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+NL+RDK TGKSKGF F+ YEDQRST L+VDNL G + RT++VDH
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT 109
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL + + SWH Y+D+A+I++GGLP+D+SEGD++ IFSQYG V
Sbjct: 1 MNAIRQIEALNKKELENAVPPEASWHADYRDTAYIYIGGLPFDISEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LNLVRDK TGKS+GF F+ YEDQRST L+VDNL G VL R +RVDHV
Sbjct: 61 HLNLVRDKETGKSRGFAFLKYEDQRSTDLAVDNLGGATVLGRVLRVDHV 109
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSIRAIQQLNKRELEAGISPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RDK TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP D
Sbjct: 61 WIKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVDHTR-YKPKDDEDM 119
Query: 122 TDEETKKLRTIGCAPGTE 139
D +L PG E
Sbjct: 120 RDNTMGEL---DVDPGVE 134
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 124/215 (57%), Gaps = 23/215 (10%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V I+ ++ ++L G SWHD+Y++SA+I++GGL L+EGDVI I SQYGE+VN+ +
Sbjct: 4 VNQIRTINARQLELGGG-SWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVVNVEMP 62
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYT---- 122
RDK T K +GF F+ YEDQRSTVL+VDNL G K+L RT+RVDHV ++K + ++ T
Sbjct: 63 RDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQETGLMK 122
Query: 123 DEETKKLRTI------------GCAPGTEFGSILPVKTED------IKQEKDSKPTESKD 164
+ + L + P G + + ED I+Q ++ + + SK
Sbjct: 123 ERSEQSLNALPEKHITASEAARAVKPVDSDGDLPDIDLEDPMAAYLIEQAREKRRSSSKH 182
Query: 165 KKRKHKEKKVKKEKKKKKKRKKSSSSSSSSSSDSD 199
+E+K + E+KK K+ K+SS +S D
Sbjct: 183 DGETKEERKRRHEQKKLKRAAKASSLDRPRASSRD 217
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 124/215 (57%), Gaps = 23/215 (10%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V I+ ++ ++L G SWHD+Y++SA+I++GGL L+EGDVI I SQYGE+VN+ +
Sbjct: 4 VNQIRTINARQLELGGG-SWHDEYRESAYIYMGGLDEALTEGDVITIASQYGEVVNVEMP 62
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYT---- 122
RDK T K +GF F+ YEDQRSTVL+VDNL G K+L RT+RVDHV ++K + ++ T
Sbjct: 63 RDKTTHKPRGFAFVMYEDQRSTVLAVDNLTGSKLLERTLRVDHVKNFKHLEHDQETGLMK 122
Query: 123 DEETKKLRTI------------GCAPGTEFGSILPVKTED------IKQEKDSKPTESKD 164
+ + L + P G + + ED I+Q ++ + + SK
Sbjct: 123 ERSEQSLNALPEKHITASEAARAVKPVDSDGDLPDIDLEDPMAAYLIEQAREKRRSSSKH 182
Query: 165 KKRKHKEKKVKKEKKKKKKRKKSSSSSSSSSSDSD 199
+E+K + E+KK K+ K+SS +S D
Sbjct: 183 DGETKEERKRRHEQKKLKRAAKASSLDRPRASSRD 217
>gi|397620275|gb|EJK65638.1| hypothetical protein THAOC_13484 [Thalassiosira oceanica]
Length = 227
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
MN + + I L ++ + + SWH +Y+DSAW++ G LP+ L+EGDV+CI SQYGEI
Sbjct: 1 MNVVNEITRINDLELEQGLTHTAGSWHGKYRDSAWVYAGNLPHALTEGDVLCILSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
++NLVRD TGKS+GF F+ YED RS VL+VDN G +VL RT+RVDHV YK PK +
Sbjct: 61 EDVNLVRDDDTGKSRGFAFVKYEDARSCVLAVDNFTGAQVLGRTLRVDHVERYKLPKHIR 120
Query: 121 YTDEETKKLRTI-----GCAPGT------EFGS---------ILPVKTEDIKQEKDSKPT 160
+E+ +K T G A E S + + K E D+ T
Sbjct: 121 EKEEQAEKDGTADPSTSGVAEAGHAYKDEELASSYNLQSGQDLFARPVPEAKAEGDNIDT 180
Query: 161 ----ESKDKKRKHKEKKVK 175
+++RK KE + +
Sbjct: 181 ITGGADNEERRKRKELRAQ 199
>gi|156058602|ref|XP_001595224.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980]
gi|154701100|gb|EDO00839.1| hypothetical protein SS1G_03313 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 269
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 84/109 (77%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+ +EL +G SWH Y+D+A+I++GGLP++LSEGDV+ IFSQYGE
Sbjct: 1 MNSIRQIQELNRRELENGVPPSASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGEPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+NLVRDK TGKSKGF F+ YEDQRST L+VDNL G + RT++VDH
Sbjct: 61 YINLVRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDHT 109
>gi|388857171|emb|CCF49184.1| related to rna binding motif protein [Ustilago hordei]
Length = 321
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 86/142 (60%), Gaps = 31/142 (21%)
Query: 7 VKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
V+ I ++++ EL SWH QY DSA+IF+GGLPYDL+EGDVI IFSQYGE+V++
Sbjct: 4 VREITRINQAELDIALGNPSASWHAQYSDSAYIFIGGLPYDLTEGDVITIFSQYGEVVDV 63
Query: 64 NLVRDKIT----------------------------GKSKGFCFICYEDQRSTVLSVDNL 95
NL R + GK +GF F+ Y+DQRSTVL+VDNL
Sbjct: 64 NLPRAQSQPSRTQASGSNEEPKPEPEPEPEPKPVGKGKHRGFGFLMYQDQRSTVLAVDNL 123
Query: 96 NGVKVLSRTIRVDHVNDYKPPK 117
NG VL RT+RVDHV YK PK
Sbjct: 124 NGAVVLGRTLRVDHVAGYKQPK 145
>gi|68069647|ref|XP_676735.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56496565|emb|CAH99460.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 189
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +K+I+KL+E EL + + SWHDQYK+S++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIKSIEKLNETELKNLGTNNASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
E +++NLVRDK TGKSKG+CF+ YEDQRST+L+VDN NG K+L + + VDH+ +Y+ P+
Sbjct: 61 EPIDVNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVDHILNYRLPQK 120
Query: 119 NKYTDE 124
DE
Sbjct: 121 YMNNDE 126
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSIRAIQQLNKRELEAGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RD+ TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP D
Sbjct: 61 WIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNLGGANIMDRIIRVDHAR-YKPKDDEDM 119
Query: 122 TD 123
D
Sbjct: 120 RD 121
>gi|366988985|ref|XP_003674260.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
gi|342300123|emb|CCC67880.1| hypothetical protein NCAS_0A13220 [Naumovozyma castellii CBS 4309]
Length = 171
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 96/128 (75%), Gaps = 5/128 (3%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
++ K+I++++E+EL SG ++ SWH QYKD A+I++GGL +L+EGD+I +FSQYG
Sbjct: 1 MSKAKSIQQINERELQSGILTTEQSWHYQYKDQAYIYIGGLDKELTEGDIISVFSQYGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V+L LV D TG+SKGF F+ YEDQRSTVL++DNLNGVKV S TI+VDH + P+D +
Sbjct: 61 VDLLLVNDNQTGESKGFAFLKYEDQRSTVLAIDNLNGVKVGSNTIQVDHT--FYEPRDEQ 118
Query: 121 YTDEETKK 128
+ ET K
Sbjct: 119 WDYRETMK 126
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Query: 4 LTNVKNIKKLSEQELS---SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I +++E+EL +G+ SWH QY SAW++VG L + L+EGDVIC+ SQYGEI
Sbjct: 1 MNTIKEILRINEEELKRGLAGTAASWHQQYAQSAWVYVGNLDHALTEGDVICVLSQYGEI 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
+L+LVR++ TGKS+GF F YED RS VL+VDN G+++ R++RVDHV +Y+ PK
Sbjct: 61 EDLHLVREEDTGKSRGFAFCKYEDARSCVLAVDNFTGIELCGRSLRVDHVENYRLPK 117
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+++EL +G + SWH Y+D+A+I++GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSIRAIQQLNKRELEAGINPEGSWHTDYRDTAFIYIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ L RD+ TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP D
Sbjct: 61 WIKLARDRETGKSRGFAWIKYEDQRSCDLAVDNLGGANIMDRIIRVDHAR-YKPKDDEDM 119
Query: 122 TD 123
D
Sbjct: 120 RD 121
>gi|399216607|emb|CCF73294.1| unnamed protein product [Babesia microti strain RI]
Length = 158
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 91/115 (79%), Gaps = 2/115 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
++ +++I+KLSE EL + +SWH +YKDS +I++GGL L+EGD+I +FSQ+GE +
Sbjct: 1 MSGIEDIRKLSEAELKQDLRDESSWHYRYKDSCYIYIGGLHKKLTEGDIIIVFSQFGEPI 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
++NLVRD TG+SKGFCF+ Y +Q+ST+L+VDN+NG K+L + ++VDHV DYK P
Sbjct: 61 DINLVRDSKTGESKGFCFLGYRNQKSTILAVDNMNGYKLLDKVLKVDHVLDYKAP 115
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 97/140 (69%), Gaps = 8/140 (5%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPYDLSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH----VNDYKPPK 117
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH + D + P+
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHARYKIRDDEDPE 120
Query: 118 DNK--YTDEETKKLRTIGCA 135
+ + + D K+ R G A
Sbjct: 121 EGRIGWEDMVRKERRERGLA 140
>gi|350297073|gb|EGZ78050.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 395
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPYDLSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPYDLSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|336464966|gb|EGO53206.1| hypothetical protein NEUTE1DRAFT_150582 [Neurospora tetrasperma
FGSC 2508]
Length = 395
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPYDLSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIEAGIPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|50307365|ref|XP_453661.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642795|emb|CAH00757.1| KLLA0D13420p [Kluyveromyces lactis]
Length = 166
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 103/161 (63%), Gaps = 10/161 (6%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +++I+KLSE+EL G ++SWH +YKD A+I GG+ +L+E D++ IFSQYG
Sbjct: 1 MNQIRSIQKLSERELECGILKPESSWHHEYKDQAYINFGGMHLELTEADILTIFSQYGCP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V++ LVRD+ TGKSKGF F+ YEDQRST+L+VDNLNG KV R IRVDH Y+P D
Sbjct: 61 VDIKLVRDQTTGKSKGFGFLKYEDQRSTILAVDNLNGAKVCGRLIRVDHAF-YRPRSDEA 119
Query: 121 YTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTE 161
+E ++ +F V +E +KQE + P +
Sbjct: 120 EYEEAVRQELE------KDFAKTGDVPSEPMKQESVADPLD 154
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 86/108 (79%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ IK+L+++EL +G + SWH Y+D+A++++GGLPY++SEGD++ IFSQYGE V
Sbjct: 1 MNKIRQIKELNKRELEAGITPEGSWHADYRDTAFVYIGGLPYEVSEGDIVTIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
+NLVRDK TGKSKGF F+ YEDQRS L+VDNL+G KV+ R I VDH
Sbjct: 61 YVNLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAKVMGRIISVDH 108
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L++ EL SWH Y+D+A++++GGLP++LSEGD++ IFSQYG V
Sbjct: 1 MQSIRQIERLNQTELDKCIPPNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++NLVRDK TGKS+GFCF+ YEDQRS L+VDNL+G V+ R I VDH
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH 108
>gi|154303176|ref|XP_001551996.1| hypothetical protein BC1G_09608 [Botryotinia fuckeliana B05.10]
Length = 195
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L+ +EL +G SWH Y+D+A+I++GGLP++LSEGD++ IFSQYGE
Sbjct: 1 MNSIRQIQELNRRELENGVSPSASWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
+NL+RDK TGKSKGF F+ YEDQRST L+VDNL G + RT++VDH
Sbjct: 61 YINLIRDKETGKSKGFAFLKYEDQRSTDLAVDNLGGAVIAGRTLKVDH 108
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+I+ GGLPY+LSEGD+I IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 3/117 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++EL +G SWH Y+D+A+++ GGLPY+L+EGDVI IFSQYGE
Sbjct: 23 MNQIRAIQALNKKELENGIPPSASWHTDYRDTAFVYFGGLPYELTEGDVITIFSQYGEPT 82
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH YK D
Sbjct: 83 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLIRVDHAR-YKARDD 138
>gi|302420537|ref|XP_003008099.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
gi|261353750|gb|EEY16178.1| U2 snRNP component IST3 [Verticillium albo-atrum VaMs.102]
Length = 333
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I+ L++QE+ +G + SWH Y+D+A+I+ GGLPY++SEGDVI IFSQ+GE V
Sbjct: 1 MNQIKAIQALNKQEIENGISPEASWHVDYRDTAFIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGK+KGF ++ YEDQRST L+VDNL G + SR +RVDH
Sbjct: 61 WLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNLGGATIGSRMVRVDHA 109
>gi|346977782|gb|EGY21234.1| RNA-binding motif protein [Verticillium dahliae VdLs.17]
Length = 333
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I+ L++QE+ +G + SWH Y+D+A+I+ GGLPY++SEGDVI IFSQ+GE V
Sbjct: 1 MNQIKAIQALNKQEIENGISPEASWHVDYRDTAFIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGK+KGF ++ YEDQRST L+VDNL G + SR +RVDH
Sbjct: 61 WLKLARDKETGKAKGFGWLKYEDQRSTDLAVDNLGGATIGSRMVRVDHA 109
>gi|449304345|gb|EMD00352.1| hypothetical protein BAUCODRAFT_28706 [Baudoinia compniacensis UAMH
10762]
Length = 304
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ +++L++ EL SWH Y+D+A+I++GGLP++LSEGDV+ IFSQYG V
Sbjct: 1 MQSIRQVQRLNDVELEKCVPPNASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NLVRDK TGKSKGF F+ YEDQRS L+VDNL+G V+ R I VDH
Sbjct: 61 HINLVRDKETGKSKGFAFLKYEDQRSCDLAVDNLSGAGVMGRVISVDHT 109
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 81/106 (76%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
K I++++E+E + G K SWHD+Y +S +IFVG L + L+EGD++ +F QYG + +LN R
Sbjct: 5 KEIQRINEREAALGLKASWHDEYANSPYIFVGNLDHGLTEGDIVAVFEQYGRVRDLNRAR 64
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
DK TG KGF F+ Y+D RS +L+VDNLNG++++ RT+RVDHV +Y
Sbjct: 65 DKKTGDPKGFAFLGYQDPRSCILAVDNLNGIQLVGRTLRVDHVKNY 110
>gi|398412159|ref|XP_003857408.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
gi|339477293|gb|EGP92384.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
Length = 329
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L++ EL S SWH Y+D+A++++GGLP++LSEGD++ IFSQYG V
Sbjct: 1 MQSIRQIERLNQTELEKVIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++NLVRDK TGKS+GFCF+ YEDQRS L+VDNL+G V+ + + VDH
Sbjct: 61 HINLVRDKETGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGKVLSVDH 108
>gi|367034235|ref|XP_003666400.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
gi|347013672|gb|AEO61155.1| hypothetical protein MYCTH_2311045 [Myceliophthora thermophila ATCC
42464]
Length = 347
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+I+ GGLPY+L+EGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIENGVSPEASWHADYRDTAFIYFGGLPYELTEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R IRVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVDHA 109
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 77/96 (80%)
Query: 25 SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYED 84
+WHD++KD+A+I+VGGL DLSEGDVI IFSQ+GEI ++N+ RDK TG S+GF F+ Y D
Sbjct: 2 NWHDEFKDTAYIYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMD 61
Query: 85 QRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
QRSTVL+VDN++G +VL R ++VDH +P K N+
Sbjct: 62 QRSTVLAVDNMSGAEVLGRKLKVDHARYKQPGKRNE 97
>gi|169600369|ref|XP_001793607.1| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
gi|160705424|gb|EAT89749.2| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
Length = 373
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 86/114 (75%), Gaps = 3/114 (2%)
Query: 4 LTNVKNIKKLSEQELSSGSKT--SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +V+ I++L+++EL +G T SWH Y+D+A+I +GGLP++LSEGD+I IFSQYGE V
Sbjct: 1 MNSVRAIQQLNKRELEAGVGTEGSWHTDYRDTAFINIGGLPFELSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
+ L RDK TGKS+GF +I YEDQRS L+VDNL G ++ R IRVDH YKP
Sbjct: 61 WVKLARDKETGKSRGFAWIKYEDQRSCDLAVDNLGGSTIMDRVIRVDHAR-YKP 113
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ G + SWH Y+D+A+I+ GGLPY+LSEGD+I IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIEQGIPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL+G ++ R IRVDH
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLSGAEIGGRLIRVDHA 109
>gi|300175056|emb|CBK20367.2| unnamed protein product [Blastocystis hominis]
Length = 301
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ N++ + +L+E+EL + + SWH YKD WI+ GG+ +LSEGD+IC+FSQ+GE+
Sbjct: 1 MNNIREVLRLNEKELENDTPFDCSWHQTYKDCPWIYFGGISPELSEGDIICMFSQWGEVE 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
++NL+RD TGKSKGF F+ YE+ S VL+VDN +G+++L R + VDH DY+PP
Sbjct: 61 DINLIRDHDTGKSKGFGFLRYENWLSCVLAVDNFSGMELLGRIVCVDHKRDYRPP 115
>gi|255716984|ref|XP_002554773.1| KLTH0F13442p [Lachancea thermotolerans]
gi|238936156|emb|CAR24336.1| KLTH0F13442p [Lachancea thermotolerans CBS 6340]
Length = 134
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 90/119 (75%), Gaps = 4/119 (3%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ V++I+ LS +EL +G K SWH +Y+D A++++GGL +L+EGDV+ +FSQYG
Sbjct: 1 MNQVRSIQNLSLRELENGVLSPKASWHHEYRDQAYVYIGGLNKELTEGDVLTVFSQYGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
V++NLVRD+ TG+SKGFC++ +EDQRS++L+VDNLNG V R I+VDH YKP +N
Sbjct: 61 VDINLVRDRETGESKGFCYLKFEDQRSSILAVDNLNGAVVAGRAIKVDHTV-YKPRGEN 118
>gi|50290711|ref|XP_447788.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527099|emb|CAG60737.1| unnamed protein product [Candida glabrata]
Length = 169
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 93/125 (74%), Gaps = 7/125 (5%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I++++E+EL +G + SWH +YKD A+IF+GGL L+EGD++ IFSQYG
Sbjct: 1 MNQIKAIQRINEKELEAGILKPEHSWHQEYKDQAYIFIGGLNRQLTEGDLLTIFSQYGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN- 119
V++ LVRDK T +SKGF F+ YEDQRST+L+VDNLNG+ V R I+VDH+ + P+D+
Sbjct: 61 VDVLLVRDKETHESKGFAFLKYEDQRSTILAVDNLNGITVAGRQIKVDHI--FFTPRDDI 118
Query: 120 -KYTD 123
+YT+
Sbjct: 119 PEYTE 123
>gi|294942558|ref|XP_002783584.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
gi|239896081|gb|EER15380.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
Length = 191
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Query: 7 VKNIKKLSEQEL--SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLN 64
+ I++LSE+EL + SWH++Y DSA++++G L L+EGD+I +FSQ+GEI+++N
Sbjct: 10 IDRIRQLSERELKDQTPEHASWHEKYHDSAYLYIGNLDRGLTEGDLITVFSQFGEILDVN 69
Query: 65 LVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
LVRDK TGKSKGF F+ YEDQRST ++DN+ G ++ R ++VDHVN Y+ P
Sbjct: 70 LVRDKETGKSKGFGFLAYEDQRSTRYAIDNMIGFNLVGRPLKVDHVNSYRAP 121
>gi|358381284|gb|EHK18960.1| hypothetical protein TRIVIDRAFT_44275 [Trichoderma virens Gv29-8]
Length = 320
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G SWH Y+D+A+++ GGLPY+LSEGD+I IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R +RVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDHA 109
>gi|116193997|ref|XP_001222811.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
gi|88182629|gb|EAQ90097.1| hypothetical protein CHGG_06716 [Chaetomium globosum CBS 148.51]
Length = 334
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPY+LSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKREIENGVPPEASWHTDYRDTAFVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TG+SKGF ++ YEDQRST L+VDNL G ++ R +RVDH
Sbjct: 61 FLKLARDKETGRSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRMVRVDHA 109
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ + L+++EL + + SWH Y+D+AWI+VGGL DL+EGDV+ IFSQ+G
Sbjct: 1 MNAIRQTQLLNKRELENATPPSASWHADYRDTAWIYVGGLHSDLTEGDVVTIFSQFGNPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+LNL+RDK TGKSKGF F+ YEDQRS L+VDNL G +VL R +RVDH YK D
Sbjct: 61 HLNLIRDKETGKSKGFGFLKYEDQRSCDLAVDNLGGAEVLGRLLRVDHTR-YKKKDDE-- 117
Query: 122 TDEETKKL 129
DE+T ++
Sbjct: 118 -DEDTYRI 124
>gi|453088501|gb|EMF16541.1| RRM_1-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 114
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L++ EL S SWH Y+D+A++++GGLP++LSEGD++ IFSQYG V
Sbjct: 1 MQSIRQIERLNQTELDKCIPSNASWHTDYRDTAYLYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++NLVRDK TGKS+GFCF+ YEDQRS L+VDNL+G V+ R I VDH
Sbjct: 61 HINLVRDKDTGKSRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDH 108
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 87/118 (73%), Gaps = 3/118 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ G + SWH Y+D+A+++ GGL Y+L+EGDV+ IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKKEIEQGISPEASWHVDYRDTAYVYFGGLSYELTEGDVVTIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
L LVRD+ TGKSKGF ++ YEDQRST L+VDNL G ++ R +RVDH YKP +D+
Sbjct: 61 FLKLVRDRETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLVRVDHAR-YKPHEDD 117
>gi|320589446|gb|EFX01907.1| u2 snrnp component ist3 [Grosmannia clavigera kw1407]
Length = 353
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I++L+++EL G + SWH Y+D+A+++ GGLP++LSEGDVI IFSQYGE V
Sbjct: 1 MNKIRQIQELNKKELEQGISPQASWHTDYRDTAFVYFGGLPFELSEGDVITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
L L RD+ TGKSKGF ++ YEDQRST L+VDNL G + R I VDH YK D
Sbjct: 61 FLKLARDRETGKSKGFGWLKYEDQRSTDLAVDNLGGASISGRLIHVDHAR-YKARDD 116
>gi|358396474|gb|EHK45855.1| hypothetical protein TRIATDRAFT_283470 [Trichoderma atroviride IMI
206040]
Length = 332
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G SWH Y+D+A+++ GGLPY+LSEGD+ IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPDASWHVDYRDTAFVYFGGLPYELSEGDIATIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKSKGF ++ YEDQRST L+VDNL G ++ R +RVDH
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNLGGAEIGGRLLRVDHA 109
>gi|346321453|gb|EGX91052.1| RNA binding domain protein [Cordyceps militaris CM01]
Length = 323
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPY+LSEGDVI IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK +GKSKGF ++ YE+Q+ST L+VDNL G +V R +RVDH
Sbjct: 61 FLKLVRDKESGKSKGFGWLKYENQKSTDLAVDNLGGAQVGGRLLRVDHA 109
>gi|82793516|ref|XP_728072.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484235|gb|EAA19637.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 347
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 108/178 (60%), Gaps = 32/178 (17%)
Query: 1 MNPLTNVKNIKKLSEQELSS--GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
M +K+I+KL+E EL + + SWHDQYK+S++I++G L L+EGD++ +FSQ+G
Sbjct: 1 MGIFDKIKSIEKLNETELKNLGTNSASWHDQYKESSYIYIGNLDTRLTEGDIVIVFSQFG 60
Query: 59 EIVNLNLVRDK--------------------------ITGKSKGFCFICYEDQRSTVLSV 92
E +++NLVRDK I GKSKG+CF+ YEDQRST+L+V
Sbjct: 61 EPIDVNLVRDKETGVLANLALLRVFRFSTIFIYHFFFILGKSKGYCFLAYEDQRSTILAV 120
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNKYT-DEETKKLRTIGCAPGTEFGSILPVKTE 149
DN NG K+L + + VDH+++Y+ P+ KY ++E K + G A G G V++E
Sbjct: 121 DNFNGFKLLDKPLVVDHISNYRLPQ--KYMNNDEMDKYKPTG-AEGQGIGIYNVVESE 175
>gi|452848098|gb|EME50030.1| hypothetical protein DOTSEDRAFT_122130, partial [Dothistroma
septosporum NZE10]
Length = 114
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I++L++ EL SWH Y+D+A++++GGLP++LSEGD++ IFSQYG V
Sbjct: 1 MQSIRQIERLNQTELDKCVPLNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++NLVRDK TGKSKGFCFI YEDQRS L+VDNL+G V+ R + VDH
Sbjct: 61 HINLVRDKETGKSKGFCFIKYEDQRSCDLAVDNLSGAGVMGRVMSVDH 108
>gi|403216110|emb|CCK70608.1| hypothetical protein KNAG_0E03510 [Kazachstania naganishii CBS
8797]
Length = 172
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 97/143 (67%), Gaps = 8/143 (5%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ + I+K+++ EL SG + SWHD+Y+D A+IF+GGL +L+EGD++ +FSQ+G
Sbjct: 1 MRQARAIQKINQAELDSGIISPELSWHDEYRDQAYIFIGGLNKNLTEGDILTVFSQFGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V++ LVRD+ +G+SKGF ++ YEDQRST+L+VDN+NGVK+ R ++VDH ++P D+
Sbjct: 61 VDILLVRDRNSGESKGFAYLKYEDQRSTILAVDNMNGVKIAGRMVQVDHTL-FEPKADHT 119
Query: 121 Y----TDEETKKLRTIGCAPGTE 139
D E KK A TE
Sbjct: 120 VYKDAVDAELKKDFVKETAASTE 142
>gi|342883559|gb|EGU84022.1| hypothetical protein FOXB_05442 [Fusarium oxysporum Fo5176]
Length = 318
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPY+LSEGDVI IFSQ+GE V
Sbjct: 1 MNKIRAIQALNKKEIENGITPEASWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL G + R I VDH
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADIGGRLISVDHA 109
>gi|254585211|ref|XP_002498173.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
gi|238941067|emb|CAR29240.1| ZYRO0G04004p [Zygosaccharomyces rouxii]
Length = 167
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 86/119 (72%), Gaps = 4/119 (3%)
Query: 4 LTNVKNIKKLSEQELSSGSKT---SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I++++E ELS G T SWH +Y++ A+IF+GGL +L+E DV+ +FSQYG
Sbjct: 1 MNQIKAIERINEAELSQGILTHEQSWHYEYRNQAYIFIGGLHKELTEADVLTVFSQYGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
V+L LVRD+ G+S+GF ++ YEDQRSTVL+VDNLNG V R IRVDH Y+P D+
Sbjct: 61 VDLKLVRDRENGESRGFAYLKYEDQRSTVLAVDNLNGAIVAGRRIRVDHAL-YEPRDDD 118
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I++L+ +E+ +G + SWH Y+D+A+I+ GGLPYDL+EGD+I IFSQ+GE V
Sbjct: 1 MNKIRAIQELNRREIENGITPEGSWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL G + R I VDH
Sbjct: 61 FLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADIGGRMISVDHA 109
>gi|213401655|ref|XP_002171600.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|211999647|gb|EEB05307.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 234
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 84/115 (73%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ ++ I++L+E+EL SWH YKDSA+I++G L L+E DV+ IFS++G V++
Sbjct: 1 MNTIREIERLNEKELGKSLSASWHQDYKDSAYIYIGNLDKSLNEHDVVRIFSEFGTPVDI 60
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+LVRDK T +S+GF F+ Y DQRST+L+VDN+ VK+ R +RVDHV +Y+ P++
Sbjct: 61 HLVRDKETKESRGFAFLKYADQRSTILAVDNMTNVKLHDRLVRVDHVANYRVPEN 115
>gi|310797734|gb|EFQ32627.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 331
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I++L+ +E+ +G + SWH Y+D+A+I+ GGLPY++SEGDVI +FSQ+GE V
Sbjct: 1 MNKIRAIQELNRKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL G + R I VDH
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDHA 109
>gi|254565187|ref|XP_002489704.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029500|emb|CAY67423.1| hypothetical protein PAS_chr1-1_0468 [Komagataella pastoris GS115]
Length = 192
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 89/129 (68%), Gaps = 7/129 (5%)
Query: 4 LTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ VK I+KL++QEL + SWH +Y+DSA+I++G LPY+++E D++ IFSQYG
Sbjct: 1 MNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQYGVPT 60
Query: 62 NLNLVRDKIT-GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
++ L RD GKSKGF F+ YED RST L+VDNLNG+K+ RTI VDH Y+P
Sbjct: 61 HVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPA---V 116
Query: 121 YTDEETKKL 129
Y DE+ +++
Sbjct: 117 YQDEDDERM 125
>gi|408395588|gb|EKJ74767.1| hypothetical protein FPSE_05102 [Fusarium pseudograminearum CS3096]
Length = 319
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPY+LSEGDVI IFSQ+GE V
Sbjct: 1 MNKIRAIQALNKKEIENGITPEGSWHTDYRDTAYVYFGGLPYELSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL G + R + VDH
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGADMGGRLVSVDHA 109
>gi|307215083|gb|EFN89890.1| RNA-binding motif protein, X-linked 2 [Harpegnathos saltator]
Length = 87
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 68/80 (85%)
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NL+RDK TGK KGF F+CYEDQRST+L+VDN NG+K+L R IRVDHV +YK P
Sbjct: 6 YGEIVNINLIRDKDTGKQKGFGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVANYKVP 65
Query: 117 KDNKYTDEETKKLRTIGCAP 136
KD+K DEET+KLR GCAP
Sbjct: 66 KDSKNIDEETRKLRKEGCAP 85
>gi|328858704|gb|EGG07816.1| hypothetical protein MELLADRAFT_43078 [Melampsora larici-populina
98AG31]
Length = 133
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 22/133 (16%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
+ N++ K ++E+EL+ G + SWHD YKDSA+I++GGL L+EGDVI IFSQYGE V++
Sbjct: 1 MNNIRATKAINEKELALGIQASWHDDYKDSAYIYIGGLDTGLTEGDVITIFSQYGEPVDI 60
Query: 64 NLVRDKI------TG----------------KSKGFCFICYEDQRSTVLSVDNLNGVKVL 101
N+ + K +G KS+GFCF+ YE+Q ST L+VDNLNG VL
Sbjct: 61 NMPKAKPEQTKNESGNPEEAKSQVKTKAGPVKSRGFCFLMYENQLSTNLAVDNLNGAIVL 120
Query: 102 SRTIRVDHVNDYK 114
RT+RVDH +YK
Sbjct: 121 GRTLRVDHCKNYK 133
>gi|302894521|ref|XP_003046141.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
gi|256727068|gb|EEU40428.1| hypothetical protein NECHADRAFT_33762 [Nectria haematococca mpVI
77-13-4]
Length = 307
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 71/91 (78%)
Query: 20 SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCF 79
S + SWH Y+D+A+I+ GGLPY+LSEGDV+ IFSQ+GE V L LVRDK TGKSKGF +
Sbjct: 3 STPEGSWHTDYRDTAYIYFGGLPYELSEGDVVTIFSQFGEPVFLKLVRDKETGKSKGFGW 62
Query: 80 ICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+ YEDQRST L+VDNL G ++ R +RVDH
Sbjct: 63 LKYEDQRSTDLAVDNLGGAEIGGRLVRVDHA 93
>gi|209877655|ref|XP_002140269.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555875|gb|EEA05920.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 207
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
Query: 10 IKKLSEQELSSGSKT--SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
+K LS+ E + T SWH Y++SA+I++GGL Y L+EGD++ +FSQ+GE +++NL+R
Sbjct: 11 VKSLSDFEYNKCYNTEGSWHSTYRNSAYIYIGGLNYGLTEGDIVIVFSQWGEPIDVNLIR 70
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
D TGKSKGFCF+ YEDQ+ST+L+VDN N + +L ++VDHV++YK D
Sbjct: 71 DPKTGKSKGFCFLAYEDQQSTILAVDNANDMILLGNKLKVDHVSNYKVKSD 121
>gi|367017792|ref|XP_003683394.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
gi|359751058|emb|CCE94183.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
Length = 167
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ ++ I+++++ ELSSG SWH++YKD A+IF+GGL +L+E D++ IFSQYG
Sbjct: 1 MNQIRAIQRINDTELSSGILSPNLSWHNEYKDRAYIFIGGLNVELTEADILTIFSQYGIP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
V++ LVRD+ TG SKGF ++ YEDQRS VL++DNLNG K+ R I+VDH + P+D+
Sbjct: 61 VDVFLVRDRETGDSKGFGYLKYEDQRSAVLAIDNLNGSKIAGRIIKVDHA--WYTPRDDM 118
Query: 121 YTDEET 126
+E
Sbjct: 119 IEYQEA 124
>gi|426259210|ref|XP_004023193.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Ovis aries]
Length = 304
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 69/82 (84%)
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGEIVN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+ P
Sbjct: 1 YGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRLP 60
Query: 117 KDNKYTDEETKKLRTIGCAPGT 138
+D++ DE T++L+ GC T
Sbjct: 61 EDSEEMDEVTRELQERGCGTHT 82
>gi|380479686|emb|CCF42869.1| U2 snRNP component IST3 [Colletotrichum higginsianum]
Length = 333
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 80/109 (73%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+I+ GGLPY++SEGDVI +FSQ+GE V
Sbjct: 1 MNKIRAIQALNKKEIENGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITVFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L L RDK TGKSKGF ++ YEDQRST L+VDNL G + R I VDH
Sbjct: 61 WLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNLGGATIKDRLISVDHA 109
>gi|365981695|ref|XP_003667681.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
gi|343766447|emb|CCD22438.1| hypothetical protein NDAI_0A02810 [Naumovozyma dairenensis CBS 421]
Length = 169
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 83/109 (76%), Gaps = 3/109 (2%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K+I++++++EL G + SWH +YKD A+I++GGLP DL+E D++ +FSQ+G
Sbjct: 1 MNQIKSIQRINQKELDVGILSEEQSWHHEYKDQAYIYIGGLPRDLTEADILTVFSQFGIP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
V++ LVRD +G+SKGF ++ YEDQRST+L+VDNLNG K+ TI VDH
Sbjct: 61 VDIFLVRDHQSGESKGFAYLKYEDQRSTILAVDNLNGTKLNGNTIHVDH 109
>gi|328350123|emb|CCA36523.1| Polyadenylate-binding protein 1-like [Komagataella pastoris CBS
7435]
Length = 268
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 9/133 (6%)
Query: 2 NP--LTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY 57
NP + VK I+KL++QEL + SWH +Y+DSA+I++G LPY+++E D++ IFSQY
Sbjct: 73 NPGSMNKVKQIEKLNQQELDQNIQFEASWHQEYRDSAYIYIGSLPYEITETDLLTIFSQY 132
Query: 58 GEIVNLNLVRDKIT-GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
G ++ L RD GKSKGF F+ YED RST L+VDNLNG+K+ RTI VDH Y+P
Sbjct: 133 GVPTHVKLARDYANGGKSKGFAFLKYEDWRSTALAVDNLNGIKIKDRTISVDHTT-YRPA 191
Query: 117 KDNKYTDEETKKL 129
Y DE+ +++
Sbjct: 192 ---VYQDEDDERM 201
>gi|45187890|ref|NP_984113.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|44982674|gb|AAS51937.1| ADR017Wp [Ashbya gossypii ATCC 10895]
gi|374107329|gb|AEY96237.1| FADR017Wp [Ashbya gossypii FDAG1]
Length = 173
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 84/118 (71%), Gaps = 5/118 (4%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +++I+KLSE EL G + SWH QYKD A+I GL +L+EGD++ +FSQ+G
Sbjct: 1 MNQIRSIQKLSETELEHGILSEEASWHYQYKDQAYIHFSGLNVELTEGDILTVFSQFGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+L LVRD+ TG+S+GF F+ YEDQRSTVL+VDNLNGV + R ++VDH + P+D
Sbjct: 61 TDLKLVRDRETGESRGFGFLKYEDQRSTVLAVDNLNGVNLCGRVLKVDHC--FYEPRD 116
>gi|307190798|gb|EFN74667.1| RNA-binding motif protein, X-linked 2 [Camponotus floridanus]
Length = 88
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 68/83 (81%)
Query: 57 YGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPP 116
YGE+VN+NL+RDK TGK KG+ F+CYEDQRST+L+VDN NG+K+L R IRVDHV +YK P
Sbjct: 6 YGEVVNINLIRDKDTGKQKGYGFLCYEDQRSTILAVDNFNGIKILGRVIRVDHVTNYKAP 65
Query: 117 KDNKYTDEETKKLRTIGCAPGTE 139
KD+K DEET KLR GCAP E
Sbjct: 66 KDSKNVDEETNKLRKEGCAPKKE 88
>gi|363752215|ref|XP_003646324.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889959|gb|AET39507.1| hypothetical protein Ecym_4467 [Eremothecium cymbalariae
DBVPG#7215]
Length = 173
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +++I+KLS+ EL G + SWH QYKD A+I GL +L+EGD++ IFSQ+G
Sbjct: 1 MNQIRSIQKLSDSELQQGILSEEASWHYQYKDQAYIHFSGLNLELTEGDILTIFSQFGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+L L RD+ TG+S+GF ++ YEDQRST+L+VDNLNG K+ RT++VDH + +D
Sbjct: 61 TDLKLARDRDTGESRGFGYLKYEDQRSTILAVDNLNGAKICGRTLKVDHTFYHPRNEDVD 120
Query: 121 YTDEETKKL 129
Y +E +L
Sbjct: 121 YMNEMKLQL 129
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/94 (62%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 25 SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYED 84
SWH Y+D+A+I+ GGLPYDL+EGD+I IFSQ+GE V L L RDK TGKSKGF ++ YED
Sbjct: 8 SWHVDYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYED 67
Query: 85 QRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
QRST L+VDNL G + R I VDH YKP D
Sbjct: 68 QRSTDLAVDNLGGADISGRMISVDHAR-YKPRDD 100
>gi|32398924|emb|CAD98389.1| putative RNA-binding protein, probable [Cryptosporidium parvum]
Length = 192
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 76/96 (79%)
Query: 26 WHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQ 85
WH+ YK+S++I++ GL L+EGD+ IFSQ+GE +++NL+RDK G SKG+CF+CYEDQ
Sbjct: 49 WHNNYKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQ 108
Query: 86 RSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
+ST+L+VDN N + +L + I+VDHV DYKP D +Y
Sbjct: 109 KSTILAVDNANDMILLGKHIKVDHVRDYKPNCDGEY 144
>gi|146422609|ref|XP_001487240.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
gi|146388361|gb|EDK36519.1| hypothetical protein PGUG_00617 [Meyerozyma guilliermondii ATCC
6260]
Length = 214
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 9/190 (4%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I ++++EL + SWH Y+D+++I+VG LP +L E D++ IFSQYG
Sbjct: 1 MAAIQKIIDINKRELEANVSDSASWHADYRDTSYIYVGYLPLELEEKDIVAIFSQYGNPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NLVRD+ TGKS+GFC++ YED RS VL++DN NGV++L++ I+VDHV Y ++ +
Sbjct: 61 HINLVRDRETGKSRGFCYLKYEDVRSCVLAIDNFNGVQLLNKRIKVDHV--YYKLREGQN 118
Query: 122 TDEETKKLRTI-GCAPGTEFGSILPVKTEDIKQEKDS--KPTESKDKKRKHKEKKVKKEK 178
D+ T+ P + + T +++ D P E+ +RK EK K+E+
Sbjct: 119 EDDFLVHYDTVKEIEPENDIKLLEYKDTNNVEDADDEFKDPMEAYIAERKQTEK--KRER 176
Query: 179 KKKKKRKKSS 188
+ + R K S
Sbjct: 177 HRHRDRSKHS 186
>gi|148697139|gb|EDL29086.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Mus musculus]
Length = 278
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 69/80 (86%)
Query: 56 QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
+YGEIVN+NLVRDK TGKSKGFCF+CYEDQRSTVL+VDN NG+K+ RTIRVDHV++Y+
Sbjct: 10 KYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRA 69
Query: 116 PKDNKYTDEETKKLRTIGCA 135
P++++ D+ T++L+ GC
Sbjct: 70 PQESEDVDDVTRELQEKGCG 89
>gi|448087450|ref|XP_004196332.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359377754|emb|CCE86137.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I +++ +EL + SWH ++DS++IF+G LP +L E DVI IFSQYG
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFRDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
++NLV+DK TGKS+GFC++ YED RS +L+VDNLNGV++ ++ I+VDHV+ Y
Sbjct: 61 HINLVKDKETGKSRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYY 112
>gi|340516662|gb|EGR46910.1| predicted protein [Trichoderma reesei QM6a]
Length = 93
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 69/87 (79%)
Query: 24 TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
SWH Y+D+A+I+ GGLPYDLSEGD+I IFSQYGE V L LVRDK TGKSKGF ++ YE
Sbjct: 4 ASWHVDYRDTAFIYFGGLPYDLSEGDIITIFSQYGEPVFLKLVRDKETGKSKGFGWLKYE 63
Query: 84 DQRSTVLSVDNLNGVKVLSRTIRVDHV 110
DQRST L+VDNL G ++ R +RVDH
Sbjct: 64 DQRSTDLAVDNLGGTEIGGRLLRVDHA 90
>gi|210075519|ref|XP_501900.2| YALI0C16368p [Yarrowia lipolytica]
gi|199425287|emb|CAG82220.2| YALI0C16368p [Yarrowia lipolytica CLIB122]
Length = 320
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ +++ QEL+ G+ SWH+ Y D+A+I++GGL L+E D+ +FSQ+G
Sbjct: 1 MNAIRKTTQINNQELAEGTSISASWHNDYNDTAYIYIGGLESKLTEMDIATVFSQFGNPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++ L RD+ TGKS+GF ++ YEDQRSTVL+VDN NGV++L RT+RVDH
Sbjct: 61 HVKLSRDQKTGKSRGFAWLKYEDQRSTVLAVDNFNGVELLGRTMRVDHT 109
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 68/83 (81%)
Query: 25 SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYED 84
SWH Y DSA+I+VGGL Y L+EGDVI IFSQYGE V+++L RDK TGKS GF F+ YED
Sbjct: 1 SWHANYADSAYIYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYED 60
Query: 85 QRSTVLSVDNLNGVKVLSRTIRV 107
QRST L+VDNLNG K+L RT+RV
Sbjct: 61 QRSTNLAVDNLNGSKLLGRTLRV 83
>gi|156835802|ref|XP_001642166.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112599|gb|EDO14308.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 138
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 5/130 (3%)
Query: 4 LTNVKNIKKLSEQELSSGSKT---SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I+K++E EL +G + SWHD YKD A+I++G L DL+EGD++ +FSQ+G
Sbjct: 1 MNKIKAIQKINENELENGVLSPSLSWHDTYKDQAYIYIGRLNKDLTEGDILTVFSQFGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN- 119
V++ LVR+ TG S+GF ++ YEDQRST+L+VDNLNG ++ I VDH+ Y+P D+
Sbjct: 61 VDIKLVRENETGSSRGFAYLKYEDQRSTILAVDNLNGAEIAGNAIVVDHIL-YEPRGDDL 119
Query: 120 KYTDEETKKL 129
Y + TK+L
Sbjct: 120 DYEEAVTKEL 129
>gi|46135807|ref|XP_389595.1| hypothetical protein FG09419.1 [Gibberella zeae PH-1]
Length = 306
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%)
Query: 20 SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCF 79
S + SWH Y+D+A+I+ GGLPY+LSEGDVI IFSQ+GE V L L RDK TGKSKGF +
Sbjct: 6 STPEGSWHTDYRDTAYIYFGGLPYELSEGDVITIFSQFGEPVWLKLARDKETGKSKGFGW 65
Query: 80 ICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+ YEDQRST L+VDNL G + R + VDH
Sbjct: 66 LKYEDQRSTDLAVDNLGGADMGGRLVSVDHA 96
>gi|448082856|ref|XP_004195240.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
gi|359376662|emb|CCE87244.1| Piso0_005787 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I +++ +EL + SWH +KDS++IF+G LP +L E DVI IFSQYG
Sbjct: 1 MNAIKKINEINYKELENNISDSASWHADFKDSSYIFIGFLPQELKEDDVIKIFSQYGIPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
++NLV+DK TGK +GFC++ YED RS +L+VDNLNGV++ ++ I+VDHV+ Y
Sbjct: 61 HINLVKDKETGKPRGFCYLKYEDYRSCILAVDNLNGVQIFNKRIKVDHVHYY 112
>gi|351699029|gb|EHB01948.1| RNA-binding motif protein, X-linked 2 [Heterocephalus glaber]
Length = 270
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 69/83 (83%)
Query: 56 QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
+YGE+VN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV++Y+
Sbjct: 2 KYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRA 61
Query: 116 PKDNKYTDEETKKLRTIGCAPGT 138
PK++ D+ T++L+ GC T
Sbjct: 62 PKESDEMDDVTRQLQEKGCGANT 84
>gi|389645911|ref|XP_003720587.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|351637979|gb|EHA45844.1| U2 snRNP component IST3 [Magnaporthe oryzae 70-15]
gi|440472117|gb|ELQ41000.1| U2 snRNP component IST3 [Magnaporthe oryzae Y34]
gi|440483610|gb|ELQ63975.1| U2 snRNP component IST3 [Magnaporthe oryzae P131]
Length = 330
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I+ L+++E+ G + SWH Y+D+A+++ GGL LSEGD+I IFSQYGE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKS+GF ++ YEDQRST L+VDNL G + R +RVDH
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDHA 109
>gi|86196844|gb|EAQ71482.1| hypothetical protein MGCH7_ch7g889 [Magnaporthe oryzae 70-15]
Length = 290
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I+ L+++E+ G + SWH Y+D+A+++ GGL LSEGD+I IFSQYGE V
Sbjct: 1 MNQIKAIQALNKKEIEQGISPEASWHVDYRDTAFVYFGGLDDTLSEGDIITIFSQYGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
L LVRDK TGKS+GF ++ YEDQRST L+VDNL G + R +RVDH
Sbjct: 61 FLKLVRDKETGKSRGFGWLKYEDQRSTDLAVDNLGGAVIKDRMMRVDHA 109
>gi|449499026|ref|XP_002194981.2| PREDICTED: brain mitochondrial carrier protein 1 [Taeniopygia
guttata]
Length = 349
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 19/127 (14%)
Query: 52 CIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
C S+YGE+VN+NLVRDK TGKSKGFCF+CYEDQRST+L+VDN NG+K+ RTIRVDHV
Sbjct: 5 CSRSKYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVA 64
Query: 112 DYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQEKDSKPTESKDKKRKHKE 171
+Y+PPK+++ D+ T+ L GC VKT P S D + +E
Sbjct: 65 NYRPPKESEDWDDVTRALDAKGCG----------VKT---------PPHTSSDSLSEDEE 105
Query: 172 KKVKKEK 178
VKK+K
Sbjct: 106 VPVKKQK 112
>gi|291002051|ref|XP_002683592.1| RRM motif-containing protein [Naegleria gruberi]
gi|284097221|gb|EFC50848.1| RRM motif-containing protein [Naegleria gruberi]
Length = 284
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 85/111 (76%), Gaps = 4/111 (3%)
Query: 7 VKNIKKLSEQELSSG---SKTSWHDQYKD-SAWIFVGGLPYDLSEGDVICIFSQYGEIVN 62
K I +L+++ELS G + +SWH Q K+ +A+I++GGL + L+EGD++ +FSQYGEIV+
Sbjct: 4 AKQINELNQKELSLGYTNTPSSWHHQEKNRTAYIYIGGLDFRLTEGDLLSVFSQYGEIVD 63
Query: 63 LNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
++LVR++ SKGFCFI YED RST+L++DNLNG+++ R I VDH +Y
Sbjct: 64 IDLVREEQELTSKGFCFIAYEDVRSTILAIDNLNGIELGGRIICVDHAPNY 114
>gi|395848769|ref|XP_003804091.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Otolemur garnettii]
Length = 373
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 2 NPLTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQY-- 57
+PLT VK I +L+E+E+ G K SWH QYKDSAWIF+GGLPY+L+EGD+IC+FSQY
Sbjct: 32 SPLTKVKLINELNEREVQLGVADKVSWHSQYKDSAWIFLGGLPYELTEGDIICVFSQYLH 91
Query: 58 ----GEIV-NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVND 112
G V +L ++ + F + S L L +++ RTIRVDHV++
Sbjct: 92 PFPSGNFVSSLRVLHFGSLRPLRPFPSGPFVSLHSFPLDT-FLPSLRIKGRTIRVDHVSN 150
Query: 113 YKPPKDNKYTDEETKKLRTIGCAPGTEFGSI 143
Y+ PKD++ DEET++L+ IGC T S+
Sbjct: 151 YRAPKDSEELDEETRRLQEIGCGAHTPSPSL 181
>gi|291240642|ref|XP_002740229.1| PREDICTED: CG10466-like [Saccoglossus kowalevskii]
Length = 281
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 68/83 (81%)
Query: 56 QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
+YGEI N+NLVRDK TGK+KGFCFICYEDQRSTVL+VDN NG K+L R +RVDHV DY+
Sbjct: 2 KYGEIANINLVRDKKTGKTKGFCFICYEDQRSTVLAVDNFNGTKLLGRILRVDHVADYRK 61
Query: 116 PKDNKYTDEETKKLRTIGCAPGT 138
PKD+ D+ TKK+R GCAP T
Sbjct: 62 PKDDDTLDDLTKKIRMEGCAPKT 84
>gi|260945497|ref|XP_002617046.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
gi|238848900|gb|EEQ38364.1| hypothetical protein CLUG_02490 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I ++E+EL+ SWH YKD+++I++G L DL + D++ IFSQYG
Sbjct: 1 MNAIQKILSMNEKELAQNVSDAASWHADYKDTSYIYIGNLHQDLKDEDILKIFSQYGNPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
+LN+++DK TGKS+GFC++ YED RS +L++DNLNGVK+ R +++DH
Sbjct: 61 HLNMIKDKETGKSRGFCYLKYEDHRSCILAIDNLNGVKIFDRPMKIDHT 109
>gi|294656886|ref|XP_459205.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
gi|199431815|emb|CAG87376.2| DEHA2D16544p [Debaryomyces hansenii CBS767]
Length = 265
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I K++++EL + SWH YKD+++I++G LP+DL+E D++ IFSQYG
Sbjct: 1 MNAIQKINKINQKELENNVSDSASWHADYKDTSYIYIGFLPFDLNEMDIVKIFSQYGIPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
++NL++DK TGKS+GFC++ YED +S VL++DN NG ++ + I+VDHV Y
Sbjct: 61 HINLIKDKETGKSRGFCYLKYEDYKSCVLAIDNFNGTQLRDKKIKVDHVYYY 112
>gi|367000485|ref|XP_003684978.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
gi|357523275|emb|CCE62544.1| hypothetical protein TPHA_0C03940 [Tetrapisispora phaffii CBS 4417]
Length = 145
Score = 119 bits (299), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
Query: 4 LTNVKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K+I ++ EL+SG + SWHD+Y+D A++++GGL +L+E D++ IFSQ+G
Sbjct: 1 MNKIKSINAINASELNSGILDASLSWHDEYRDQAYVYIGGLNKELTEHDILTIFSQFGVP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++ LVRDK T +SKGF ++ YEDQRS VL++DNLNG K+ R I VDHV
Sbjct: 61 TDIKLVRDKETSESKGFAYLKYEDQRSCVLAIDNLNGSKIAGRNIVVDHV 110
>gi|66475752|ref|XP_627692.1| RNA-binding protein [Cryptosporidium parvum Iowa II]
gi|46229304|gb|EAK90153.1| RNA-binding protein, putative [Cryptosporidium parvum Iowa II]
Length = 153
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 99/164 (60%), Gaps = 13/164 (7%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
YK+S++I++ GL L+EGD+ IFSQ+GE +++NL+RDK G SKG+CF+CYEDQ+ST+
Sbjct: 1 YKNSSYIYISGLDLRLTEGDIAIIFSQWGEPIDINLIRDKKLGISKGYCFLCYEDQKSTI 60
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKTE 149
L+VDN N + +L + I+VDHV DYKP D +Y + G G FG ++T
Sbjct: 61 LAVDNANDMILLGKHIKVDHVRDYKPNCDGEYIFTGAE-----GSGIGV-FGVTKDIQTR 114
Query: 150 DIKQEKDSKPTESKDKKRKHKEKKVKKEKKKKKKRKKSSSSSSS 193
K E D +K R + + +KK+R KS S S S
Sbjct: 115 -FKTELDILNLNFSNKIRG------RSDNIEKKRRAKSLSRSLS 151
>gi|6322195|ref|NP_012270.1| Ist3p [Saccharomyces cerevisiae S288c]
gi|731908|sp|P40565.1|IST3_YEAST RecName: Full=U2 snRNP component IST3; AltName: Full=Increased
sodium tolerance protein 3; AltName: Full=U2 snRNP
protein SNU17
gi|557854|emb|CAA86207.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270052|gb|AAS56407.1| YIR005W [Saccharomyces cerevisiae]
gi|151943163|gb|EDN61498.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406218|gb|EDV09485.1| U2 snRNP component IST3 [Saccharomyces cerevisiae RM11-1a]
gi|256274151|gb|EEU09061.1| Ist3p [Saccharomyces cerevisiae JAY291]
gi|259147264|emb|CAY80517.1| Ist3p [Saccharomyces cerevisiae EC1118]
gi|285812652|tpg|DAA08551.1| TPA: Ist3p [Saccharomyces cerevisiae S288c]
gi|323337228|gb|EGA78482.1| Ist3p [Saccharomyces cerevisiae Vin13]
gi|323348164|gb|EGA82418.1| Ist3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354514|gb|EGA86351.1| Ist3p [Saccharomyces cerevisiae VL3]
gi|346228216|gb|AEO21093.1| IST3 [synthetic construct]
gi|349578956|dbj|GAA24120.1| K7_Ist3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765028|gb|EHN06543.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298728|gb|EIW09824.1| Ist3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 148
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 85/111 (76%), Gaps = 4/111 (3%)
Query: 10 IKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
I++++++EL SG SWH++YKD+A+I++G L +L+EGD++ +FS+YG V++ L
Sbjct: 4 IQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILS 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RD+ TG+S+GF ++ YEDQRST+L+VDNLNG K+ R +++DH Y+P +
Sbjct: 64 RDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHTF-YRPKR 113
>gi|323304472|gb|EGA58241.1| Ist3p [Saccharomyces cerevisiae FostersB]
gi|323308617|gb|EGA61859.1| Ist3p [Saccharomyces cerevisiae FostersO]
Length = 148
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 85/111 (76%), Gaps = 4/111 (3%)
Query: 10 IKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
I++++++EL SG SWH++YKD+A+I++G L +L+EGD++ +FS+YG V++ L
Sbjct: 4 IQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILS 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RD+ TG+S+GF ++ YEDQRST+L+VDNLNG K+ R +++DH Y+P +
Sbjct: 64 RDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKIDHTF-YRPKR 113
>gi|401839237|gb|EJT42544.1| IST3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 149
Score = 119 bits (297), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 85/111 (76%), Gaps = 4/111 (3%)
Query: 10 IKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
I++++++EL SG SWH +Y+D+A++++G L +L+EGD++ +FS+YG V++ L
Sbjct: 4 IQEINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDVILS 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RD+ TG+S+GF ++ YEDQRST+L+VDNLNGVKV R +++DH Y+P K
Sbjct: 64 RDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTF-YRPKK 113
>gi|358419810|ref|XP_003584333.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 287
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 68/83 (81%)
Query: 56 QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKP 115
+Y EIVN+NLV DK TGKSKGFCF+CYEDQRST+L+VD+ NG+K+ RTIRVDHV++Y+
Sbjct: 7 RYREIVNINLVPDKKTGKSKGFCFLCYEDQRSTILAVDSFNGIKIKGRTIRVDHVSNYRL 66
Query: 116 PKDNKYTDEETKKLRTIGCAPGT 138
P+D++ DE T++L+ GC T
Sbjct: 67 PEDSEEMDEVTRELQERGCGTHT 89
>gi|365760130|gb|EHN01872.1| Ist3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 167
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 85/111 (76%), Gaps = 4/111 (3%)
Query: 10 IKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
I++++++EL SG SWH +Y+D+A++++G L +L+EGD++ +FS+YG V++ L
Sbjct: 4 IREINDRELQSGILSPHLSWHSEYRDNAYVYIGNLNKELTEGDILTVFSEYGVPVDVMLS 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RD+ TG+S+GF ++ YEDQRST+L+VDNLNGVKV R +++DH Y+P K
Sbjct: 64 RDENTGESQGFAYLKYEDQRSTILAVDNLNGVKVGGRPLKIDHTF-YRPKK 113
>gi|255731053|ref|XP_002550451.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132408|gb|EER31966.1| predicted protein [Candida tropicalis MYA-3404]
Length = 234
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 87/122 (71%), Gaps = 3/122 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ VK I +++++EL+S + K+SWH Y+D+ +I++G +P++L+E D+I IFSQYG
Sbjct: 1 MNTVKQINQINQKELNSNTSYKSSWHYDYRDTNYIYIGNIPFNLNEKDIIIIFSQYGIPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKY 121
++NL++DK TGK +GF F+ Y + +S +L++DN NG+K+ R +RVDH N YK D K
Sbjct: 61 HINLIKDKETGKHRGFGFLKYANFKSCILAIDNFNGIKLGDRILRVDH-NYYKLRGDEKE 119
Query: 122 TD 123
D
Sbjct: 120 DD 121
>gi|400597950|gb|EJP65674.1| U2 snRNP component IST3 [Beauveria bassiana ARSEF 2860]
Length = 319
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 119/198 (60%), Gaps = 20/198 (10%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I+ L+++E+ +G + SWH Y+D+A+++ GGLPY+LSEGD+I IFSQ+GE V
Sbjct: 1 MNQIRAIQALNKKEIENGISPEASWHTDYRDTAYVYFGGLPYELSEGDIITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK- 120
L LVRDK TGKSKGF ++ YE+QRST L+VDNL G +V R +RVDH Y D
Sbjct: 61 FLKLVRDKETGKSKGFGWLKYENQRSTDLAVDNLGGAEVGGRLLRVDHAR-YSMRDDEDQ 119
Query: 121 ------YTDEETKKLRTIGCAPGTE-FGSILPVKTED------IKQEKDSKPTES---KD 164
+ D + K+ + + +E P+ E+ I + D P ++ ++
Sbjct: 120 DEFKVGWEDLQRKEGKPVSDDESSEDEAPQRPMLQEERDLAKLIHEHDDDDPMKAFLIEE 179
Query: 165 KKRKHKEKKVKKEKKKKK 182
KK++ +E + + +KK+ +
Sbjct: 180 KKKEVEEARERADKKESR 197
>gi|154416000|ref|XP_001581023.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915247|gb|EAY20037.1| hypothetical protein TVAG_365450 [Trichomonas vaginalis G3]
Length = 156
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
Query: 7 VKNIKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
KNI+KL E EL G +S+H +KD WI V L Y+LSEGD++ +F QYG I+N
Sbjct: 5 AKNIQKLQEIELRKGVFDELSSFHGDFKDCPWIKVNNLNYELSEGDILTVFEQYGTIINF 64
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
L+RD TG S+G + YED RST+L+VDNLNG+ +L RTI VDH
Sbjct: 65 ELIRDAKTGDSRGTAIMEYEDWRSTILAVDNLNGITLLGRTISVDH 110
>gi|361127085|gb|EHK99065.1| putative Zinc finger CCCH domain-containing protein 42 [Glarea
lozoyensis 74030]
Length = 215
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 65/77 (84%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
+ +I++GGLP++LSEGD+I IFSQ+GE V +NL+RDK TGKSKGF F+ YEDQRST L+V
Sbjct: 41 TTYIYIGGLPFELSEGDIITIFSQFGEPVYINLIRDKETGKSKGFAFLKYEDQRSTDLAV 100
Query: 93 DNLNGVKVLSRTIRVDH 109
DNL G ++ RT++VDH
Sbjct: 101 DNLGGSVIMGRTLKVDH 117
>gi|326435435|gb|EGD81005.1| RNA binding domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 353
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 15/119 (12%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
+ I++++E+EL+ +K SWHD YKDSA+IF+G L Y L+EGDV+ +FSQYGE ++NLV
Sbjct: 2 TRAIERINEKELAGATKKSWHDDYKDSAYIFIGNLDYHLTEGDVLAVFSQYGEPTDINLV 61
Query: 67 RDKITGKSKGFCF--------ICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
RDK+ G +G F +C S LS + RT+RVDHV DY+ P+
Sbjct: 62 RDKVRGVRRGSFFSHVRVSVRVCLSGHLSASLS-------SLAGRTLRVDHVRDYEAPE 113
>gi|385303030|gb|EIF47131.1| rna binding domain-containing protein [Dekkera bruxellensis
AWRI1499]
Length = 215
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
++ ++NI+KLS EL + SWH Y D+AW+F+G LP +++E D++ +FSQYG
Sbjct: 1 MSQIQNIQKLSNAELEEATPFNASWHQDYNDTAWVFIGRLPPEMNEMDILIMFSQYGVPQ 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRT-IRVDHV 110
+L L RD TG+S+ F F+ YED +S VL+VDN NG +++ + I+VDHV
Sbjct: 61 SLKLARDAETGESRRFAFLKYEDFKSAVLAVDNFNGYEIIPGSRIQVDHV 110
>gi|320581779|gb|EFW95998.1| U2 snRNP component IST3 [Ogataea parapolymorpha DL-1]
Length = 172
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ V+ I++L+E+EL G+ K SWH +Y D+++IF+G LP +++E D++ +FSQYG
Sbjct: 1 MNKVRKIQQLNERELELGTPIKASWHYEYADTSYIFIGNLPPEMNEMDLLIVFSQYGVPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSR-TIRVDHVNDYKPPKDNK 120
+L L+RDK TG+S+ F F+ YE ST+L+VDNLNG +RVDHV YKP + +K
Sbjct: 61 HLKLMRDKSTGQSRRFAFLKYEQFESTILAVDNLNGYSFGDEYVLRVDHVR-YKPYQYDK 119
Query: 121 YTD 123
D
Sbjct: 120 EFD 122
>gi|150866279|ref|XP_001385825.2| hypothetical protein PICST_48043 [Scheffersomyces stipitis CBS
6054]
gi|149387535|gb|ABN67796.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 233
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 80/117 (68%), Gaps = 3/117 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +++ I ++++EL++ + K SWH Y+D+ +I++G + D+ E D+I IFSQYG
Sbjct: 1 MNSIQKINAINQKELATNTSYKASWHYDYRDTNYIYIGNIASDIEEKDIITIFSQYGVPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
++N+++DK TG+ +GF F+ Y + +S VL+VDN NGV V R +RVDH YK KD
Sbjct: 61 HINMIKDKETGRHRGFAFLKYANMKSCVLAVDNFNGVVVYERKLRVDHTY-YKLKKD 116
>gi|344304766|gb|EGW34998.1| hypothetical protein SPAPADRAFT_58120 [Spathaspora passalidarum
NRRL Y-27907]
Length = 218
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I +++++EL++ + K+SWH Y+D+ +I++G +P L+ D++ IFSQYG
Sbjct: 1 MNSIHKINQINQKELATNTSYKSSWHYDYRDTNYIYIGNIPSSLTAQDIVIIFSQYGIPT 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
+LNLV+DK TG+ +GF F+ Y +S +L++DN NG+KV R +RVDH N YK
Sbjct: 61 HLNLVKDKTTGEHRGFAFLKYAHFKSCILAIDNFNGIKVGDRNLRVDH-NYYK 112
>gi|323333072|gb|EGA74473.1| Ist3p [Saccharomyces cerevisiae AWRI796]
Length = 104
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
Query: 10 IKKLSEQELSSG---SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
I++++++EL SG SWH++YKD+A+I++G L +L+EGD++ +FS+YG V++ L
Sbjct: 4 IQQINDKELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILS 63
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIR 106
RD+ TG+S+GF ++ YEDQRST+L+VDNLNG K+ R ++
Sbjct: 64 RDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALK 103
>gi|403370596|gb|EJY85165.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 360
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 61/80 (76%)
Query: 45 LSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRT 104
++EGD+ +FSQ+GE+V+ L RD+ TGKSKGF F+ YEDQ+STVL+VDNLNG+ + R
Sbjct: 1 MNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNLNGIDLCGRL 60
Query: 105 IRVDHVNDYKPPKDNKYTDE 124
I VDHV YK P++ TD+
Sbjct: 61 ISVDHVMQYKIPREYLETDQ 80
>gi|167540183|ref|XP_001741597.1| U2 snRNP component IST3 [Entamoeba dispar SAW760]
gi|165893807|gb|EDR21934.1| U2 snRNP component IST3, putative [Entamoeba dispar SAW760]
Length = 135
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 8 KNIKKLSEQELSSGSKT--SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
KNI KLSEQ+L K SWH +YK++ I++GG+ +L+EGD+I +FSQ+GE++++N+
Sbjct: 9 KNISKLSEQDLEYSCKYEDSWHYKYKNNNEIYIGGIANELNEGDIIIVFSQFGEVIDINM 68
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
+ + KGFCF+ Y+D RS VL++DN NG+++ R + VDH
Sbjct: 69 PWNNDEDEHKGFCFLKYKDPRSCVLAIDNFNGIELNGRRLTVDH 112
>gi|448518692|ref|XP_003867973.1| U2 snRNP protein [Candida orthopsilosis Co 90-125]
gi|380352312|emb|CCG22537.1| U2 snRNP protein [Candida orthopsilosis]
Length = 269
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS---KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I +++++EL+S + K+SWH +Y+D+ +IF+ +P+ + D++ IFSQYG
Sbjct: 1 MNKIKQINQINQKELASNTTSYKSSWHYEYRDTNYIFISNIPHSIKPHDLVIIFSQYGIP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
+LNLV++ TG +GF F+ Y + +S +L++DN NG+K+ R + VDH
Sbjct: 61 THLNLVKNHETGGHRGFAFLKYANFKSCILAIDNFNGIKIGDRMLHVDH 109
>gi|444324112|ref|XP_004182696.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
gi|387515744|emb|CCH63177.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
Length = 140
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 4 LTNVKNIKKLSEQELSSGSKT---SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
++ K I++L++ EL + + SWH Y D +IF+G L +L+EGD++ +FSQ+G
Sbjct: 1 MSQYKKIQQLNDTELQNNILSIEKSWHYNYIDYGYIFIGNLNKNLTEGDILTVFSQFGNP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
++L L+R+K T S GF ++ YED RS +L++DNLNG KV T+++DH + P NK
Sbjct: 61 IDLKLIRNKQTNHSMGFAYLKYEDSRSCILAIDNLNGSKVAGNTLKIDHF--WHDPNKNK 118
Query: 121 YTDEE 125
DEE
Sbjct: 119 -NDEE 122
>gi|440290535|gb|ELP83929.1| U2 snRNP component IST3, putative [Entamoeba invadens IP1]
Length = 135
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Query: 8 KNIKKLSEQ--ELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
+NI++LSEQ E SS ++SWH +YK++ I++GG+ +L+EGD+I +FSQYGE++++++
Sbjct: 9 QNIQRLSEQDLEFSSTYESSWHYRYKENREIYIGGIAPELNEGDIIVVFSQYGEVIDIHM 68
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
D + KGFC + Y++ +S VL+VDNLNG+ + + + VDH
Sbjct: 69 PWDSEGDRHKGFCLLTYKNPKSCVLAVDNLNGIVLNEKMLIVDH 112
>gi|354543955|emb|CCE40677.1| hypothetical protein CPAR2_107120 [Candida parapsilosis]
Length = 273
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
Query: 4 LTNVKNIKKLSEQELSSGS---KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ +K I +++++EL+S + K+SWH +Y+D+ +IF+ +P + D++ IFSQYG
Sbjct: 1 MNKIKRINQINQKELASSATSYKSSWHYEYRDTNYIFISNIPNFIKPHDLVVIFSQYGIP 60
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
+LNL+++ TG+ +GF F+ Y + +S VL++DN NG+KV R + VDH
Sbjct: 61 THLNLIKNHETGQHRGFAFLKYANFKSCVLAIDNFNGIKVGDRMLHVDH 109
>gi|344228131|gb|EGV60017.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 215
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I ++++QEL + SWH+ YKDS +IF+GGL L E D+I IFSQYG
Sbjct: 10 MNSINRINQINQQELDANVSDSASWHNDYKDSNYIFIGGLNAQLKEKDLIVIFSQYGLPT 69
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++ LV+D ++KGF ++ Y+ +S VL+VDNLNGV V + IRVDH
Sbjct: 70 HIKLVKDSEKKENKGFGYLKYQQFQSCVLAVDNLNGVVVYDKKIRVDH 117
>gi|67481301|ref|XP_656000.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473172|gb|EAL50615.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703174|gb|EMD43668.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 112
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 8 KNIKKLSEQEL--SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
KNI KLSEQ+L S + SWH +YKD+ I++GG+ +L+EGD+I +FSQ+GE++++N+
Sbjct: 9 KNISKLSEQDLKYSCRYEDSWHYKYKDNNEIYIGGIASELNEGDIIIVFSQFGEVIDINM 68
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTI 105
+ + KGFCF+ Y+D RS VL++DN NG+++ +T+
Sbjct: 69 PWNNERDEHKGFCFLTYKDPRSCVLAIDNFNGIELNGKTL 108
>gi|68484767|ref|XP_713695.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
gi|68484858|ref|XP_713650.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435157|gb|EAK94545.1| hypothetical protein CaO19.1045 [Candida albicans SC5314]
gi|46435204|gb|EAK94591.1| hypothetical protein CaO19.8647 [Candida albicans SC5314]
Length = 353
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I +++++EL+S + K+SWH Y+D+ ++++G +PY+L+ D+I IFSQYG
Sbjct: 94 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 153
Query: 62 NLNLVRDKITGK-SKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
++NL++DK + K +GF F+ Y + +S +L++DN NG+K+ R ++VDH N YK
Sbjct: 154 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYK 206
>gi|407033727|gb|EKE36960.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 112
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 9 NIKKLSEQEL--SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
NI KLSEQ+L S + SWH +YKD+ I++GG+ +L+EGD+I +FSQ+GE++++N+
Sbjct: 10 NISKLSEQDLKYSCRYEDSWHYKYKDNNEIYIGGIASELNEGDMIIVFSQFGEVIDINMP 69
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTI 105
+ + KGFCF+ Y+D RS VL++DN NG+++ RT+
Sbjct: 70 WNNERDEHKGFCFLTYKDPRSCVLAIDNFNGIELNGRTL 108
>gi|238879122|gb|EEQ42760.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 258
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I +++++EL+S + K+SWH Y+D+ ++++G +PY+L+ D+I IFSQYG
Sbjct: 1 MNTIKQINQINQKELNSQTSYKSSWHYDYRDTNYLYIGNIPYNLTTKDLIIIFSQYGIPT 60
Query: 62 NLNLVRDKITGK-SKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
++NL++DK + K +GF F+ Y + +S +L++DN NG+K+ R ++VDH N YK
Sbjct: 61 HINLIKDKESSKHHRGFGFLKYANFKSCILAIDNFNGIKLGDRYLKVDH-NYYK 113
>gi|406607075|emb|CCH41590.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Wickerhamomyces ciferrii]
Length = 222
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 48 GDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
GD++ IFSQYG V+L L+RDK TGKS+GF ++ YEDQRST+L+VDNLNG KVL R IRV
Sbjct: 12 GDILIIFSQYGIPVHLKLIRDKETGKSRGFGYLKYEDQRSTILAVDNLNGAKVLGRIIRV 71
Query: 108 DHV 110
+H
Sbjct: 72 NHT 74
>gi|429859411|gb|ELA34193.1| u2 snrnp component ist3 [Colletotrichum gloeosporioides Nara gc5]
Length = 318
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 4 LTNVKNIKKLSEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ ++ I++L+++E+ G + SWH Y+D+A+I+ GGLPY++SEGDVI IFSQ+GE V
Sbjct: 1 MNKIRAIQELNKKEIEHGISPEGSWHVDYRDTAYIYFGGLPYEMSEGDVITIFSQFGEPV 60
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTI 105
L L RDK TGKSKGF ++ + R ++ + KV T+
Sbjct: 61 WLKLARDKETGKSKGFGWLNVDHARYKFRDDEDPDEGKVDWETV 104
>gi|357490655|ref|XP_003615615.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355516950|gb|AES98573.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 161
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Query: 1 MNPLTNVKNIKKLSEQE--LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYG 58
MNPLT VK I+ ++ +E L+ SWH +YKDSA++FVGG+P+D +EGD+I +F+QYG
Sbjct: 1 MNPLTLVKRIQLINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDIIAVFAQYG 60
Query: 59 EIVNLNLVRDK 69
E+V++NLVRD
Sbjct: 61 EVVDVNLVRDA 71
>gi|241948671|ref|XP_002417058.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640396|emb|CAX44647.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 257
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 101/183 (55%), Gaps = 24/183 (13%)
Query: 4 LTNVKNIKKLSEQELSSGS--KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
+ +K I +++++EL S + K+SWH Y+D+ ++++G +P++L+E D+I IFSQYG
Sbjct: 1 MNTIKQINQINQKELISNTSYKSSWHYDYRDTNYLYIGNIPFNLTEKDIIKIFSQYGIPT 60
Query: 62 NLNLVRDKITGK-----------SKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
++NL++DK K +GF F+ Y + +S +L++DN NG+K+ R ++VDH
Sbjct: 61 HINLIKDKDKDKDKDKQETEKKYHRGFGFLKYSNFKSCILAIDNFNGIKLGDRYLKVDH- 119
Query: 111 NDYKPPKDNK-------YTDEETKKLRTIGCAPGTEFGSILPV--KTEDIKQEKDSKPTE 161
N YK D Y +E K+ I + K ED KQEKD + E
Sbjct: 120 NYYKLRNDENEDDYLIDYNNEIMMKVNEEEEELIENNKEIKLIKGKGED-KQEKDEEKDE 178
Query: 162 SKD 164
KD
Sbjct: 179 FKD 181
>gi|149244636|ref|XP_001526861.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449255|gb|EDK43511.1| hypothetical protein LELG_01689 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 414
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 19/116 (16%)
Query: 4 LTNVKNIKKLSEQELSSGS---KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
+ ++ I +++++EL+S S K+SWH Y+D+ ++++G +PY ++ D++ +FSQYG
Sbjct: 1 MNKIRQINQINQKELASKSTTYKSSWHYDYRDTNYVYIGNIPYSITRNDLLVMFSQYGIP 60
Query: 61 VNLNLVRD----------------KITGKSKGFCFICYEDQRSTVLSVDNLNGVKV 100
++NL D I K +GF F+ Y + +S +L++DN NGVKV
Sbjct: 61 THINLPLDTRTDNYNDGNDGKDEKNIAPKHRGFAFLKYANFKSCILAIDNFNGVKV 116
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E +I IFS G +VN LV D+ TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 96 NGVKVLSRTIRVDHVND----------YKPPKDN 119
N ++++R +RVD ND Y+PP N
Sbjct: 70 NDYEIMNRKLRVDFSNDGGEEENSAPTYQPPPLN 103
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E +I IFS G +VN LV D+ TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 96 NGVKVLSRTIRVDHVND----------YKPPKDN 119
N ++++R +RVD ND Y+PP N
Sbjct: 70 NDYEIMNRKLRVDFSNDGGEEENSAPTYQPPPLN 103
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E ++ IFS G ++N LV D+ TG+ KGF F Y D S +V NL
Sbjct: 9 VFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND----------YKPPKDN 119
N ++++R +RVD ND Y+PP N
Sbjct: 69 NDYEIMNRKLRVDFSNDGGEEENSAPTYQPPPLN 102
>gi|170583025|ref|XP_001896399.1| hypothetical protein Bm1_24695 [Brugia malayi]
gi|158596418|gb|EDP34761.1| hypothetical protein Bm1_24695 [Brugia malayi]
Length = 60
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
Query: 1 MNPLTNVKNIKKLSEQEL----SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
MNPLTN++N K++++EL + + SWH +Y DSAWI++GGLPYDL+EGDVI +FSQ
Sbjct: 1 MNPLTNIRNQNKINDRELLLGFTGSNSKSWHQKYSDSAWIYIGGLPYDLNEGDVIAVFSQ 60
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E +I IFS G++VN LV D+ TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRNL 69
Query: 96 NGVKVLSRTIRVDHVND 112
N ++++R +RVD ND
Sbjct: 70 NDYEIMNRKLRVDFSND 86
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E +I IFS G+++N LV D+ TG+ KGF F+ + D S +V NL
Sbjct: 9 VFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
N ++++R +RVD ND
Sbjct: 69 NDHEIMNRKLRVDFSND 85
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY LSE + IFS+ G+++N LV D+ TGK KGF F Y D S +V
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAV 66
Query: 93 DNLNGVKVLSRTIRVDHVND 112
NLN +++ R +RVD N+
Sbjct: 67 RNLNDTEIMGRKLRVDFSNE 86
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 20 VFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKTED----I 151
NG ++ R +RVD+ K + EE K+L G + + +G PV+ ED I
Sbjct: 80 NGHELNGRQLRVDNAASEK-------SKEELKQLTVAGPSQESPYGP--PVQPEDAPEAI 130
Query: 152 KQEKDSKPTE 161
Q S P E
Sbjct: 131 SQAVASLPPE 140
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PYD+SE ++ IF + G++V LV DK T + KGF F+ Y D S +V NL
Sbjct: 11 VFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDADSAASAVRNL 70
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
N ++ RT+RVD+ ND + +NK ++E
Sbjct: 71 NDFELNGRTLRVDYSNDNRGTTNNKDQNQE 100
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora fijiensis
CIRAD86]
Length = 301
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PY +SE ++ IF + G++VN LV DK TG+ KGF F+ Y D + +V NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 96 NGVKVLSRTIRVDHVND 112
N + RT+RVD+ ND
Sbjct: 71 NDFDLKGRTLRVDYSND 87
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PY +SE ++ IF + G++VN LV DK TG+ KGF F+ Y D + +V NL
Sbjct: 11 VFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDTDAAASAVRNL 70
Query: 96 NGVKVLSRTIRVDHVND 112
N + RT+RVD+ ND
Sbjct: 71 NESDLNGRTLRVDYSND 87
>gi|156340730|ref|XP_001620537.1| hypothetical protein NEMVEDRAFT_v1g147835 [Nematostella
vectensis]
gi|156205583|gb|EDO28437.1| predicted protein [Nematostella vectensis]
Length = 52
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
Query: 7 VKNIKKLSEQELSSGSK--TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQ 56
+KNI+KL+++ L G SWH QYKDSA++F+GGLPYDL+EGD++C+FSQ
Sbjct: 1 IKNIQKLNDRMLEMGVTDDASWHKQYKDSAYVFIGGLPYDLTEGDILCVFSQ 52
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
+ + ++VG LP+ +SE D+ IF QYG++ +NL+ DK+TG+S+GF F+ E ++
Sbjct: 43 FMNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQ 102
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
+++NLNG V R I VN+ KP ++ + E
Sbjct: 103 SAINNLNGSSVSGRQI---VVNEAKPREERPHRHRE 135
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LP+ +SE D+ +F QYG++ +NL+ DK+TG+S+GF F+ E ++ ++D+L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
NG + R I VN+ KP ++ + E
Sbjct: 66 NGTSISGRQI---VVNEAKPREERPHRHRE 92
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD++E + IFS+ G +V+ +V D+ TGK KG+ F Y DQ + + ++ NL
Sbjct: 16 VFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRNL 75
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 76 NGYEIAGRTLRVDNA 90
>gi|402080986|gb|EJT76131.1| cleavage stimulation factor 64-kDa subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 304
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS+ G+++N LV D+ TGK KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSRAGKVINFRLVYDRETGKPKGFGFAEYPDADSAASAVRNL 69
Query: 96 NGVKVLSRTIRVDHVND 112
N +++ R +RVD N+
Sbjct: 70 NDSEIMGRKLRVDFSNE 86
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K + +FVG +PYD +E + IF + G +VN LV D+ TGK KG+ F ++DQ + +
Sbjct: 15 KSACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMS 74
Query: 91 SVDNLNGVKVLSRTIRVDHV 110
++ NLN ++ R +RVDH
Sbjct: 75 AMRNLNSFEIGGRALRVDHA 94
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G+++N LV D+ TG+ KGF F Y D S +V NL
Sbjct: 9 VFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
N + + R +RVD N+
Sbjct: 69 NDYETMGRKLRVDFSNE 85
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G+++N LV D+ TG+ KGF F Y D S +V NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
N +++ R +RVD N+
Sbjct: 69 NDYEIMGRKLRVDFSNE 85
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis UAMH
10762]
Length = 337
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PY +SE + IF + G +V+ LV DK T K KGF F+ Y D + +V NL
Sbjct: 11 VFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDVDAAASAVRNL 70
Query: 96 NGVKVLSRTIRVDHVND 112
N +V+ RT+RVD+ ND
Sbjct: 71 NEFEVMGRTLRVDYSND 87
>gi|429853390|gb|ELA28465.1| RNA-binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 314
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G+++N LV D+ TG+ KGF F Y D S +V NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
N +++ R +RVD N+
Sbjct: 69 NDYEIMGRKLRVDFSNE 85
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G+++N LV D+ TG+ KGF F Y D S +V NL
Sbjct: 9 VFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
N +++ R +RVD N+
Sbjct: 69 NDYEIMGRKLRVDFSNE 85
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD++E + IFS+ G +VN LV D+ TGK KG+ F Y D + + ++ NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 96 NGVKVLSRTIRVD 108
NG ++ R +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 96 NGVKVLSRTIRVDH 109
NG ++ RT+RVD+
Sbjct: 74 NGYEIGGRTLRVDN 87
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+V NLN +++ R +RVD N+ +DN+
Sbjct: 65 AVRNLNDYEIMGRKLRVDFSNETVSDEDNR 94
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD++E + IFS+ G ++N LV D+ TGK KG+ F Y D + + ++ NL
Sbjct: 15 VFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRNL 74
Query: 96 NGVKVLSRTIRVD 108
NG ++ R +RVD
Sbjct: 75 NGYEINGRNLRVD 87
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +FVGGL +D +E + F++YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
+D +NG V RTIRVD
Sbjct: 63 LDGMNGKSVDGRTIRVDEA 81
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|358054768|dbj|GAA99146.1| hypothetical protein E5Q_05837 [Mixia osmundae IAM 14324]
Length = 344
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYD +E + FS G +V LV D TGK+KGF F+ + D +V NL
Sbjct: 25 IFIGNLPYDATEQQLAEHFSSAGPVVGARLVFDHDTGKAKGFGFVEFYDANVATSAVRNL 84
Query: 96 NGVKVLSRTIRVDH 109
NG + L R +RVDH
Sbjct: 85 NGEQFLGRALRVDH 98
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDH 109
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDN 92
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF++ G +++ LV D+ +GK KG+ F Y+D+ + + S+ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ R +RVDH
Sbjct: 78 NGRELHGRPLRVDHA 92
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDH 109
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDN 92
>gi|367018842|ref|XP_003658706.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
gi|347005973|gb|AEO53461.1| hypothetical protein MYCTH_2294810 [Myceliophthora thermophila ATCC
42464]
Length = 317
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+V NLN +++ R +RVD N+ DN+
Sbjct: 65 AVRNLNDYEIMGRKLRVDFSNETVSDDDNR 94
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKTEDIKQ 153
NG + R +RVD+ K NK EE K L T AP E PV ED +
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT--GAPIIESPYGDPVSPEDAPE 126
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDNA 93
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KGF F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 78 NGYEIGGRTLRVDNA 92
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 77 NGREFSGRALRVDNAASEK----NK---EELKSLGT 105
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|367052583|ref|XP_003656670.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
gi|347003935|gb|AEO70334.1| hypothetical protein THITE_2121633 [Thielavia terrestris NRRL 8126]
Length = 332
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + +FS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITELFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEET 126
+V NLN +V+ R +RVD N+ DN+ D T
Sbjct: 65 AVRNLNDHEVMGRKLRVDFSNETVSDDDNRDRDGAT 100
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E ++ IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 19 VFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 78
Query: 96 NGVKVLSRTIRVDH 109
NG ++ RT+RVD+
Sbjct: 79 NGYEIGGRTLRVDN 92
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 16 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 75
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 76 NGREFSGRALRVDNAASEK----NK---EELKSLGT 104
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PY +SE ++ IFS G+++N LV DK TG+ KGF F+ Y D S ++ NL
Sbjct: 11 VFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDTDSAQSAIRNL 70
Query: 96 NGVKVLSRTIRVDHVND 112
N ++ RT+RVD ND
Sbjct: 71 NEYELNGRTLRVDFSND 87
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
+S G K+S + +FVG + YD+SE + IFS+ G ++++ +V D+ TGK KG+
Sbjct: 2 MSGGYKSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGY 61
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
FI + D ++ +++ NLNG ++ R +RVD
Sbjct: 62 GFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|50552626|ref|XP_503723.1| YALI0E09174p [Yarrowia lipolytica]
gi|49649592|emb|CAG79313.1| YALI0E09174p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG +PYD +E ++ IF G +++L L+ DK TG+SKG+ F Y D + ++ NL
Sbjct: 6 VYVGSIPYDQTEEQMLDIFKSVGPVISLKLMFDKETGRSKGYGFAEYPDADTARSAIRNL 65
Query: 96 NGVKVLSRTIRVDH 109
NG +V SR +RVDH
Sbjct: 66 NGFQVGSRQLRVDH 79
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 20 SGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCF 79
+ SKTS + + +FVG + Y++ E + +FSQ G +V+L LV D+ TGK KG+ F
Sbjct: 9 AASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGF 68
Query: 80 ICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
Y D ++ ++ NLNG ++ R +RVD
Sbjct: 69 CEYNDPQTAESAIRNLNGYELNGRQLRVD 97
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLP+ +SE D+ +FS+YGE+V+ +V D+ TG+S+GF FI Y + S + L
Sbjct: 7 VFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIAAL 66
Query: 96 NGVKVLSRTIRV 107
+G + RTIRV
Sbjct: 67 DGQDLQGRTIRV 78
>gi|294896462|ref|XP_002775569.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239881792|gb|EER07385.1| RNA recognition motif containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 361
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 29 QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
Q S +FVG +PYD+ E + IFS G +V+ L+ DK+TG+ KG+ F Y DQ +
Sbjct: 4 QQNRSCSVFVGNVPYDVDEEQLKSIFSTVGPVVSFRLMHDKVTGRPKGYGFCEYADQETA 63
Query: 89 VLSVDNLNGVKVLSRTIRVD 108
++ NLN V+ R +RVD
Sbjct: 64 YAAMRNLNNVECGGRPLRVD 83
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V N +K + G K HD+ K + +FVG LP+ +SE ++ +F ++GE+V+++L+
Sbjct: 109 VSNWQKQDQANSQGGEKKFRHDR-KGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLI 167
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
D+ +G+ +GF F+ Y++++S +V NLNG+ + R I V
Sbjct: 168 HDQESGRPRGFGFVDYDNEQSAKDAVSNLNGMPLDGREISV 208
>gi|322693277|gb|EFY85143.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 309
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS+ G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVNDYK 114
N +V+ R +RVD N+ K
Sbjct: 70 NDFEVMGRKLRVDFSNEQK 88
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF++ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ RT+RVD+
Sbjct: 74 NGYEIGGRTLRVDNA 88
>gi|325189600|emb|CCA24085.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 358
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD++E + IFS+ G ++N LV D+ +GK KG+ F Y D + + ++ NL
Sbjct: 17 VFVGNIPYDVTEEMLREIFSEAGAVMNFRLVTDRDSGKPKGYGFCEYADGATALSAMRNL 76
Query: 96 NGVKVLSRTIRVD 108
NG ++ R +RVD
Sbjct: 77 NGYEINGRNLRVD 89
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
NG + R +RV DN +++ ++L+++G A
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPA 107
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +FVGGL +D +E + F++YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
++ +NG V RTIRVD
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
NG + R +RV DN +++ ++L+++G A
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPA 107
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY LSE + IFS G +V+ LV D+ GK KGF F Y D S +V
Sbjct: 1280 SKIVFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAV 1339
Query: 93 DNLNGVKVLSRTIRVDHVND 112
NLN +V+ R +RVD N+
Sbjct: 1340 RNLNDYEVMGRKLRVDFSNE 1359
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 91 NGREFSGRALRVDNAASEK----NK---EELKSLGT 119
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFG-SILPVKT-EDIKQ 153
NG + R +RVD+ K NK EE K L T + +G SI P E I +
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGTGAPVIESPYGESISPEDAPESISK 130
Query: 154 EKDSKPTE 161
S P E
Sbjct: 131 AVASLPPE 138
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFG-SILPVKT-EDIKQ 153
NG + R +RVD+ K NK EE K L T + +G SI P E I +
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGTGAPVIESPYGESISPEDAPESISK 130
Query: 154 EKDSKPTE 161
S P E
Sbjct: 131 AVASLPPE 138
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
NG + R +RV DN +++ ++L+++G A
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPA 107
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 28 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 87
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 88 NGREFSGRALRVDNAASEK----NK---EELKSLGT 116
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 26 WHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQ 85
D+ S F+G +PY LSE ++ IFS+ G++++ LV D+ TGK KGF F Y D
Sbjct: 1 MPDEKVPSRIAFIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADA 60
Query: 86 RSTVLSVDNLNGVKVLSRTIRVD--HVND------YKPPK 117
+V NL+ +++ R +RVD H D Y+PP
Sbjct: 61 EIAASAVRNLDNFEIMGRKLRVDFSHEGDKDAQDGYEPPA 100
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 20 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 79
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ R++RVD+
Sbjct: 80 NGYEIGGRSLRVDNA 94
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 52 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 111
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 112 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 157
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 8 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 67
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 68 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 113
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+++E +I +F G++V L LV D+ TGK KG+ F + D + +V NL
Sbjct: 5 VFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAVRNL 64
Query: 96 NGVKVLSRTIRVD 108
NG ++ R +R+D
Sbjct: 65 NGYEIGGRPLRID 77
>gi|296414143|ref|XP_002836762.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295631601|emb|CAZ80953.1| unnamed protein product [Tuber melanosporum]
Length = 287
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E + IFS G +++ LV D+ TG+ KGF F Y DQ + +V NL
Sbjct: 12 VFVGNIPYGLTEEQITEIFSSVGRVLSFRLVYDRETGRPKGFGFAEYSDQETAASAVRNL 71
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILP 145
+ +++ R +RVD ++ + D T+ + G P G+ LP
Sbjct: 72 DNYEIMGRKLRVDFSHEGSATEGMGMDDIMTQASGS-GVLPALPLGADLP 120
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|336261134|ref|XP_003345358.1| hypothetical protein SMAC_04589 [Sordaria macrospora k-hell]
gi|380090609|emb|CCC11604.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKK 128
+V NLN +++ R +RVD N+ +TD+++ +
Sbjct: 65 AVRNLNDHEIMGRKLRVDFSNE-------TFTDQDSAQ 95
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
+Q+K S +F+G LP+D+ E +V S++G I N+ L+RDK TG KGF F+ Y D +
Sbjct: 63 EQFKQS--VFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAA 120
Query: 88 TVLSVDNLNGVKVLSRTIRVD 108
L++ + V V R IR+
Sbjct: 121 ISLAIRSSESVSVRGRPIRIQ 141
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|298248970|ref|ZP_06972774.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297546974|gb|EFH80841.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 104
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VGGLPY +E D+I +F Q G++ + ++ D+ TG+SKGF F+ T +++ L
Sbjct: 3 IYVGGLPYQSTEQDLIQLFEQIGQVTSATVITDRETGRSKGFGFVEMSSDDETRAAIEQL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKY 121
NG + RTI V+ + + P Y
Sbjct: 63 NGSTLGDRTITVNEARERRAPGGGGY 88
>gi|340924219|gb|EGS19122.1| putative polyadenylation factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 294
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G+++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGKVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVND 112
+V NLN +++ R +RVD N+
Sbjct: 65 AVRNLNDYEIMGRKLRVDFSNE 86
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC 30864]
Length = 385
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
KDS +FVG + YD++E +VI + SQ G +++ LV D+ TGK KGF F Y D +
Sbjct: 2 KDSKCVFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQS 61
Query: 91 SVDNLNGVKVLSRTIRVD 108
++ NLN +++ R IRVD
Sbjct: 62 AIRNLNDLELKGRRIRVD 79
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 91 NGREFSGRALRVDNAASEK----NK---EELKSLGT 119
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
+Q+K S +F+G LP+D+ E +V S++G I N+ L+RDK TG KGF F+ Y D +
Sbjct: 262 EQFKQS--VFLGNLPFDVQEEEVRSAMSKFGPIANVRLIRDKETGAVKGFGFVQYTDPAA 319
Query: 88 TVLSVDNLNGVKVLSRTIRV 107
L++ + V V R IR+
Sbjct: 320 ISLAIRSSESVSVRGRPIRI 339
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|336464258|gb|EGO52498.1| hypothetical protein NEUTE1DRAFT_72168 [Neurospora tetrasperma FGSC
2508]
Length = 321
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVND 112
+V NLN +++ R +RVD N+
Sbjct: 65 AVRNLNDHEIMGRKLRVDFSNE 86
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+CFI Y+ ++++ +
Sbjct: 210 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYCFIQYKRAEDAKMALEQM 269
Query: 96 NGVKVLSRTIRVDHVND 112
G ++ RT+RV+ V++
Sbjct: 270 EGFELAGRTLRVNTVHE 286
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 29 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 88
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 89 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 134
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 30 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 89
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 90 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 135
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 86 NGREFSGRALRVDNAASEK----NK---EELKSLGT 114
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|118381422|ref|XP_001023873.1| hypothetical protein TTHERM_00248430 [Tetrahymena thermophila]
gi|89305639|gb|EAS03627.1| hypothetical protein TTHERM_00248430 [Tetrahymena thermophila
SB210]
Length = 284
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LPY L E + F QYG IVN+ + R + T +SKGF FI +E ++ +
Sbjct: 127 IYVGHLPYGLLEEQLKTYFEQYGTIVNIKVARSRKTARSKGFAFIQFEQPEVAAIAAKAM 186
Query: 96 NGVKVLSRTIRVDHV--NDYKPPKDNKYTDEETK 127
NG VL + + V HV D K P KY ++ K
Sbjct: 187 NGHMVLGKVLEV-HVLQQDQKNPFSFKYGKKQFK 219
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 26 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 85
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 86 NGREFSGRALRVDNAASEK----NK---EELKSLGT 114
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIG-CAPGTEFGSILPVKTED 150
NG + R +RV DN +++ ++L+++G AP + P+ ED
Sbjct: 78 NGREFSGRALRV----------DNAASEKNKEELKSLGPAAPIIDSPYGDPIDPED 123
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF + G++++ LV D+ TGK KG+ F Y DQ + + ++ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ R +RVD+
Sbjct: 76 NGYEIGGRNLRVDNA 90
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKT--EDIKQ 153
NG + R +RVD+ K NK EE K L T + +G + + E I +
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGTGAPVIESPYGETISPEDAPESISK 130
Query: 154 EKDSKPTE 161
S P E
Sbjct: 131 AVASLPPE 138
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKT--EDIKQ 153
NG + R +RVD+ K NK EE K L T + +G + + E I +
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGTGAPVIESPYGETISPEDAPESISK 130
Query: 154 EKDSKPTE 161
S P E
Sbjct: 131 AVASLPPE 138
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVND 112
+V NLN +++ R +RVD N+
Sbjct: 65 AVRNLNDHEIMGRKLRVDFSNE 86
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
++S +KT+ + + +FVG + Y++ E + +FSQ G +V+L LV D+ TGK KG+
Sbjct: 10 VTSTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGY 69
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
F Y D ++ ++ NLNG ++ R +RVD
Sbjct: 70 GFCEYNDAQTAESAIRNLNGFELNGRPLRVD 100
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++L LV D+ +GK KG+ F Y+DQ + + ++ NL
Sbjct: 17 VFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 76
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ R +RVD+
Sbjct: 77 NGYEIGGRALRVDNA 91
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 91 NGREFSGRALRVDNAASEK----NK---EELKSLGT 119
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++ GL D E + S++G++ ++ L++DK TG+S+GF F+ YE L+V L
Sbjct: 14 VYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTYETSSDAALAVTGL 73
Query: 96 NGVKVLSRTIRVDHV 110
NG + + + I+VDH
Sbjct: 74 NGKEFMGKVIKVDHA 88
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like [Saccoglossus
kowalevskii]
Length = 220
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 76
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFG 141
+G ++ R +RVD+ K NK EE K L+ G + FG
Sbjct: 77 SGYELNGRQLRVDNAASEK----NK---EELKILQASGPPVESPFG 115
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVNDYK 114
N +++ R +RVD N+ K
Sbjct: 70 NEYEIMGRKLRVDFSNEQK 88
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|392560296|gb|EIW53479.1| hypothetical protein TRAVEDRAFT_60908 [Trametes versicolor
FP-101664 SS1]
Length = 392
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY++ E +I +F G++V L LV D+ TGK KG+ F + D + + +V NL
Sbjct: 5 VFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSAVRNL 64
Query: 96 NGVKVLSRTIRVD 108
NG ++ R +R+D
Sbjct: 65 NGQEIGGRPLRID 77
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 31 VFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 90
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 91 NGREFSGRALRVDNAASEK----NK---EELKSLGT 119
>gi|350296344|gb|EGZ77321.1| hypothetical protein NEUTE2DRAFT_78674 [Neurospora tetrasperma FGSC
2509]
Length = 321
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PY L+E + IFS G ++N LV D+ TG+ KGF F + D S
Sbjct: 5 QPSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAAS 64
Query: 91 SVDNLNGVKVLSRTIRVDHVND 112
+V NLN +++ R +RVD N+
Sbjct: 65 AVRNLNDHEIMGRKLRVDFSNE 86
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF + G++++ LV D+ TGK KG+ F Y DQ + + ++ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 96 NGVKVLSRTIRVDHVNDYK-----------PPKDNKY 121
NG ++ R++RVD+ K PP +N Y
Sbjct: 76 NGYEIGGRSLRVDNACTEKSRMEMQNLLNQPPVENPY 112
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
V+ I + +Q++ ++ K + +FVG +PY+ S+ + IFSQ G +++ LV
Sbjct: 6 VREISAVKDQQMKEAAE-------KSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLV 58
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
D+ TGK KG+ F Y+D + ++ NLNG ++ R +RVD
Sbjct: 59 YDRETGKPKGYGFCEYKDSETAQSAMRNLNGTEIHGRQLRVD 100
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +++ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 8 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 67
Query: 96 NGVKVLSRTIRVDH 109
NG ++ R++RVD+
Sbjct: 68 NGYEIGGRSLRVDN 81
>gi|110638796|ref|YP_679005.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281477|gb|ABG59663.1| RNA binding protein [Cytophaga hutchinsonii ATCC 33406]
Length = 143
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ L E ++ F +YGE+ ++ ++ DK TG+SKGF F+ D + ++D L
Sbjct: 3 IFVGSLPFSLEENELREFFEEYGEVSSVKIISDKFTGRSKGFGFVEMPDDAAAQKAIDEL 62
Query: 96 NGVKVLSRTIRVD 108
NG +V RTI V+
Sbjct: 63 NGAEVNGRTIVVN 75
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
++S +KT+ + + +FVG + Y++ E + +F+Q G +V+L LV D+ TGK KG+
Sbjct: 10 VTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGY 69
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
F Y D ++ ++ NLNG ++ R +RVD
Sbjct: 70 GFCEYNDAQTAESAIRNLNGFELNGRPLRVD 100
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
++S +KT+ + + +FVG + Y++ E + +F+Q G +V+L LV D+ TGK KG+
Sbjct: 10 VTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGY 69
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
F Y D ++ ++ NLNG ++ R +RVD
Sbjct: 70 GFCEYNDAQTAESAIRNLNGFELNGRPLRVD 100
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I++G + ++L+E D++ FS +G I +L+L +D TG+S+GFCFI Y + + ++ N+
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQNM 664
Query: 96 NGVKVLSRTIRV 107
N + R I+V
Sbjct: 665 NQKTISGRQIKV 676
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG +P++ +E + IFS G +V+ +L + TG+ G+ FI Y++ +S ++
Sbjct: 744 VYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGRHMGYGFIDYDNPKSAEDAISTF 803
Query: 96 NGVKVLSRTIRV 107
NG + R ++V
Sbjct: 804 NGYDINGRQLKV 815
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 53/83 (63%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
+ S ++VG L ++L+E D+ +F +GE+ ++L RD TGKSKG+CFI Y+
Sbjct: 166 HAGSMQLYVGSLHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDAR 225
Query: 90 LSVDNLNGVKVLSRTIRVDHVND 112
++++ + G ++ R +RV+ V+D
Sbjct: 226 MALEQMEGFELAGRQLRVNTVHD 248
>gi|390605111|gb|EIN14502.1| hypothetical protein PUNSTDRAFT_110583 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 361
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY++ E +I +F GE++ LV D+ TGK+KG+ F + D + + +V NL
Sbjct: 5 VFVGNVPYNMGEDQLIDVFKSVGEVIGFRLVFDRETGKAKGYGFCEFADHETAMSAVRNL 64
Query: 96 NGVKVLSRTIRVD 108
N V V R +R+D
Sbjct: 65 NNVDVGGRPLRID 77
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 11 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 70
Query: 96 NGVKVLSRTIRVDHV 110
NG + R +RVD+
Sbjct: 71 NGREFSGRALRVDNA 85
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E + IFS G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVNDYK 114
N +++ R +RVD N+ K
Sbjct: 70 NDYEIMGRKLRVDFSNEQK 88
>gi|402221238|gb|EJU01307.1| hypothetical protein DACRYDRAFT_116497 [Dacryopinax sp. DJM-731
SS1]
Length = 320
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
+ DS +FVG +PY ++E +I +F G +V LV D+ TGK KG+ F + D + +
Sbjct: 3 HPDSRVVFVGNIPYGMTEEALIEVFRTVGPVVGFRLVFDRETGKPKGYGFCEFPDHETAM 62
Query: 90 LSVDNLNGVKVLSRTIRVD 108
+V NL+G +V R +RVD
Sbjct: 63 SAVRNLHGYEVQGRPLRVD 81
>gi|358391586|gb|EHK40990.1| hypothetical protein TRIATDRAFT_249243 [Trichoderma atroviride IMI
206040]
Length = 300
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVNDYK 114
N +++ R +RVD N+ K
Sbjct: 70 NEYEIMGRKLRVDFSNEQK 88
>gi|307106531|gb|EFN54776.1| hypothetical protein CHLNCDRAFT_58050 [Chlorella variabilis]
Length = 354
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+GGLPY L+E + + +G I + +LV+DK TG+SKG+ F YED R T ++ L
Sbjct: 157 IFIGGLPYYLTEEQCRELLASFGAIKSFDLVKDKETGQSKGYGFCVYEDPRVTDVACQGL 216
Query: 96 NGVKVLSRTIRV 107
NG+++ RT+ V
Sbjct: 217 NGMRMGDRTLTV 228
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ ++++ +
Sbjct: 360 LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQM 419
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDN-KYTDEET 126
G ++ RT+RV+ V++ K N +YT +E+
Sbjct: 420 EGFELAGRTLRVNTVHE----KGNVRYTPQES 447
>gi|91094479|ref|XP_970762.1| PREDICTED: similar to cleavage stimulation factor 64-kDa subunit
[Tribolium castaneum]
Length = 424
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF + G++++ LV D+ TGK KG+ F Y DQ + + ++ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMRNL 75
Query: 96 NGVKVLSRTIRVDHVNDYK-----------PPKDNKY 121
NG ++ R +RVD+ K PP +N Y
Sbjct: 76 NGYEIGGRNLRVDNACTEKSRMEMQNLLNQPPVENPY 112
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLR-TIGCAP 136
N + R +RVD+ K + EE K L+ ++G P
Sbjct: 78 NAFDLNGRPLRVDNAASEK-------SKEELKNLQASLGGPP 112
>gi|343429703|emb|CBQ73275.1| related to Cleavage stimulation factor [Sporisorium reilianum SRZ2]
Length = 391
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PYD+SE + +F + G++V LV D+ TGK KG+ F +ED +
Sbjct: 6 RGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAAS 65
Query: 91 SVDNLNGVKVLSRTIRV 107
+V NLN V+V R +R+
Sbjct: 66 AVRNLNEVEVGGRPLRI 82
>gi|388853962|emb|CCF52460.1| related to Cleavage stimulation factor [Ustilago hordei]
Length = 402
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PYD+SE + +F + G++V LV D+ TGK KG+ F +ED +
Sbjct: 6 RGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPETAAS 65
Query: 91 SVDNLNGVKVLSRTIRV 107
+V NLN V+V R +R+
Sbjct: 66 AVRNLNEVEVGGRALRI 82
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A ++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ +++
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 94 NLNGVKVLSRTIRVDHVND 112
+ G ++ RT+RV+ V++
Sbjct: 397 QMEGFELAGRTLRVNTVHE 415
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A ++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ +++
Sbjct: 337 AILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQ 396
Query: 94 NLNGVKVLSRTIRVDHVND 112
+ G ++ RT+RV+ V++
Sbjct: 397 QMEGFELAGRTLRVNTVHE 415
>gi|321460847|gb|EFX71885.1| hypothetical protein DAPPUDRAFT_93311 [Daphnia pulex]
Length = 81
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A +FVG +PY +SE + IFS+ G +V+ +V+D+ TG+S+GF F ++ S ++
Sbjct: 2 ASVFVGNIPYGVSEDQLKAIFSEAGPVVSFRIVQDRETGRSRGFGFCEFQSPDSAQTAMR 61
Query: 94 NLNGVKVLSRTIRVDHVN 111
NLNG ++ R++RVD N
Sbjct: 62 NLNGYELNGRSLRVDSAN 79
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 53/80 (66%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
A ++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ +++
Sbjct: 221 GAILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMAL 280
Query: 93 DNLNGVKVLSRTIRVDHVND 112
+ + G ++ RT+RV+ V++
Sbjct: 281 EQMEGFELAGRTLRVNTVHE 300
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 22 SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFIC 81
+KT+ + + +FVG + Y++ E + +FSQ G +V+L LV D+ TGK KG+ F
Sbjct: 14 TKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCE 73
Query: 82 YEDQRSTVLSVDNLNGVKVLSRTIRVD 108
Y D ++ ++ NLNG ++ R +RVD
Sbjct: 74 YNDSQTAESAIRNLNGFELNGRPLRVD 100
>gi|340520767|gb|EGR51003.1| predicted protein [Trichoderma reesei QM6a]
Length = 307
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY LSE + IFS G++ LV D TG+ KGF F Y D S +V
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 93 DNLNGVKVLSRTIRVDHVNDYK 114
NLN +++ R +RVD N+ K
Sbjct: 67 RNLNEYEIMGRKLRVDFSNEQK 88
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 2 NPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
NP N++ I L L+ + T+ + D IF+GGLPY L E V + +G I
Sbjct: 155 NPKLNLQAIG-LDPSALARSATTNILQE--DPNRIFIGGLPYYLEEPQVRELLEAFGPIA 211
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
+LVRDK G SKG+ F+ Y+D T ++ LNG+++ +T+ V
Sbjct: 212 RFDLVRDKENGNSKGYGFVVYQDAAVTDIACQGLNGMQMGEKTLTV 257
>gi|168033388|ref|XP_001769197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679462|gb|EDQ65909.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 55/79 (69%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VGGL Y+ SE V F ++GE+V++ +V D+ +G+S+GF F+ + + RS ++
Sbjct: 3 DANSVYVGGLSYESSEDTVKKAFMEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
+ +++G ++ RTIRV+ V
Sbjct: 63 IRDMDGGQIEGRTIRVNEV 81
>gi|346324388|gb|EGX93985.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 284
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY LSE + IFS G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDSETGRPKGFGFAEYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYT 122
N +++ R +RVD ++ K D+ YT
Sbjct: 70 NDYEIMGRKLRVDFSHEQK-ASDDDYT 95
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 53/80 (66%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
+ ++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ +++
Sbjct: 357 AMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 416
Query: 93 DNLNGVKVLSRTIRVDHVND 112
+ + G ++ RT+RV+ V++
Sbjct: 417 EQMEGFELAGRTLRVNTVHE 436
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF + G +++L LV D+ +GK KG+ F Y+DQ + + ++ NL
Sbjct: 16 VFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRNL 75
Query: 96 NGVKVLSRTIRVDHV 110
NG ++ R +RVD+
Sbjct: 76 NGYEIGGRALRVDNA 90
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 53/80 (66%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
+ ++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ +++
Sbjct: 357 AMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMAL 416
Query: 93 DNLNGVKVLSRTIRVDHVND 112
+ + G ++ RT+RV+ V++
Sbjct: 417 EQMEGFELAGRTLRVNTVHE 436
>gi|384501386|gb|EIE91877.1| hypothetical protein RO3G_16588 [Rhizopus delemar RA 99-880]
Length = 184
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K+S I+ G LPYD E DV +F +YG + ++ + D +T K+KGF F+ +E++R
Sbjct: 106 KNSTTIYAGNLPYDFVERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEERRDAED 165
Query: 91 SVDNLNGVKVLSRTIRVD 108
+ + +G V R +R+D
Sbjct: 166 AFEKFDGFSVEGRRLRLD 183
>gi|71017595|ref|XP_759028.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
gi|46098750|gb|EAK83983.1| hypothetical protein UM02881.1 [Ustilago maydis 521]
Length = 403
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +PYD+SE + +F + G++V LV D+ TGK KG+ F +ED +
Sbjct: 6 RGSRVVFVGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRETGKFKGYGFCEFEDPETAAS 65
Query: 91 SVDNLNGVKVLSRTIRVDHVN 111
+V NLN V+V R +R+ +
Sbjct: 66 AVRNLNEVEVGGRPLRISFAD 86
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLR-TIGCAP 136
N + R +RVD+ K + EE K L+ ++G P
Sbjct: 78 NAFDLNGRPLRVDNAASEK-------SKEELKNLQASLGGPP 112
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY L+E + IFS G++ LV D TG+ KGF F Y D S +V
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
NLN +++ R +RVD N+ K D+K
Sbjct: 67 RNLNDHEIMGRKLRVDFSNEQKGSDDDK 94
>gi|157412351|ref|YP_001483217.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9215]
gi|157386926|gb|ABV49631.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9215]
Length = 214
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ DVI +F+ +GE+VN +L ++ TG+ +GF FI D+ ++D L
Sbjct: 3 IFVGNLPFRAEREDVIQLFAPFGEVVNCSLPLERDTGRKRGFAFIEMGDEAIEATAIDGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 37 FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLN 96
VG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NLN
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 97 GVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
G + R +RVD+ K NK EE K L T
Sbjct: 65 GREFSGRALRVDNAASEK----NK---EELKSLGT 92
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VGGLP +LSE V + S YG++ NLV+D TG SKGF F Y+D T ++ L
Sbjct: 380 IYVGGLPSNLSEEQVKSLLSAYGKLKAFNLVKDTNTGVSKGFAFCEYQDSEVTDVACSKL 439
Query: 96 NGVKVLSRTIRVDHVN-DYKPPKD 118
NG+ + +T+ V + KPP D
Sbjct: 440 NGIPLADKTLVVQRASIGSKPPGD 463
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY L+E + IFS G++ LV D TG+ KGF F Y D S +V
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
NLN +++ R +RVD N+ K D+K
Sbjct: 67 RNLNDHEIMGRKLRVDFSNEQKGSDDDK 94
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 15/144 (10%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
+ + ++ EQ+LS+ ++ + +G +PY+ +E + IFS+ G +V+ LV
Sbjct: 430 QEVGRIREQQLSADVI----EELRSGGHGALGNIPYEATEEQLKDIFSEVGPVVSFRLVY 485
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETK 127
D+ TGK KG+ F Y+DQ + + ++ NLNG + R +RV DN +++ +
Sbjct: 486 DRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV----------DNAASEKNKE 535
Query: 128 KLRTIGC-APGTEFGSILPVKTED 150
+L+++G AP E P+ ED
Sbjct: 536 ELKSLGTGAPIIESPYGDPINPED 559
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+Q+GE+ N L ++ TG+ +GF FI D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 38 VGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNG 97
VG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NLNG
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 98 VKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
+ R +RVD+ K NK EE K L T
Sbjct: 65 REFSGRALRVDNAASEK----NK---EELKSLGT 91
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + ++V+DK TG SKG+ F Y+D T ++ L
Sbjct: 394 IFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTVTDIACAAL 453
Query: 96 NGVKVLSRTIRVDHVNDYKPPK 117
NG+++ RT+ V N P+
Sbjct: 454 NGIQLGDRTLTVRRANQGAEPR 475
>gi|145344032|ref|XP_001416543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576769|gb|ABO94836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 2 NPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIV 61
NP N+ I +G + +++D IF+GGLPY L E + + +G I
Sbjct: 107 NPALNLAAIGLDPSALQRAGVGGNLLHEHEDR--IFIGGLPYFLDEAQIRELLEAFGPIR 164
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
+LVRDK TG SKG+ F+ YED T ++ LNG+ + +T+ V
Sbjct: 165 QFDLVRDKETGNSKGYGFVVYEDVSVTDIACQGLNGMTMGDKTLTV 210
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +EG + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 359 IFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 418
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 419 NGIKMGDKTLTVRRAN 434
>gi|384500196|gb|EIE90687.1| hypothetical protein RO3G_15398 [Rhizopus delemar RA 99-880]
Length = 213
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K S I+ G LPYD E DV +F +YG + ++ + D +T K+KGF F+ +ED++
Sbjct: 135 KSSTTIYAGNLPYDFIERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEDRQDAED 194
Query: 91 SVDNLNGVKVLSRTIRVD 108
+ + +G V R +R+D
Sbjct: 195 AFEKFDGFSVEGRRLRLD 212
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+ VG +PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NL
Sbjct: 18 VCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRT 131
NG + R +RVD+ K NK EE K L T
Sbjct: 78 NGREFSGRALRVDNAASEK----NK---EELKSLGT 106
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp. CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
CC9605]
Length = 173
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+Q+GE+ N L ++ TG+ +GF FI D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 363 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 422
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 423 NGIKMGDKTLTVRRAN 438
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S+ +F+G L +D+SE DV FS++GE+ + L +D +G+ KGF ++ + Q S ++
Sbjct: 301 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 360
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKD 118
D + G ++ R +R+ D+ P+D
Sbjct: 361 DAMTGQELAGRPLRL----DFSTPRD 382
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L +++ + +GE+ + + D+ TGKS+GF ++ + + + +
Sbjct: 205 IWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEEG 264
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAP 136
G +V R IR+ D PK + TD KK AP
Sbjct: 265 QGKEVDGRAIRI----DLSTPKGD-VTDNRAKKFNDQRSAP 300
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 52/83 (62%)
Query: 29 QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
Q + +F+G L ++++E ++ FSQYG++V++ D+ TG KGF ++ Y D +
Sbjct: 276 QSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETA 335
Query: 89 VLSVDNLNGVKVLSRTIRVDHVN 111
+V+ LNGV++ R++R+D+
Sbjct: 336 QKAVEGLNGVEIAGRSLRLDYAG 358
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L +++ E + F+ G + + ++ DK TG++KGF ++ +E + ++ L
Sbjct: 185 VFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAM-AL 243
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDN 119
G ++ R IRVD V+ KPP+D
Sbjct: 244 TGTELDGREIRVD-VSTPKPPRDG 266
>gi|225711846|gb|ACO11769.1| Cleavage stimulation factor 64 kDa subunit [Lepeophtheirus
salmonis]
Length = 330
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K + +FVG +PY+ +E + IFS+ G + + LV D+ GK KG+ F Y+D +
Sbjct: 13 KSARSVFVGNIPYEATEEKLKDIFSEVGPVTSFKLVYDRENGKPKGYGFCEYKDADMALS 72
Query: 91 SVDNLNGVKVLSRTIRVDHV 110
++ NLNG ++ RT+RVD+
Sbjct: 73 AMRNLNGYEIEGRTLRVDNA 92
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y++++ D+ IFS+YGE+ N++L +D+ TGK +GF F+ + V ++++L
Sbjct: 3 IYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIEDL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
+G + + R+++ VN +P + N+
Sbjct: 63 DGAEWMGRSLK---VNKARPREKNR 84
>gi|242047590|ref|XP_002461541.1| hypothetical protein SORBIDRAFT_02g004455 [Sorghum bicolor]
gi|241924918|gb|EER98062.1| hypothetical protein SORBIDRAFT_02g004455 [Sorghum bicolor]
Length = 306
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGL D ++ DV S GEI + ++RD+ TGK+KG+CF+ Y D +V
Sbjct: 227 VFVGGLGRDATQEDVRAALSAAGEITEVRIIRDRTTGKNKGYCFVAYRDAAMASKAVAEF 286
Query: 96 NGVKVLSRTIRV 107
VK+ + RV
Sbjct: 287 GNVKICGKACRV 298
>gi|326431687|gb|EGD77257.1| hypothetical protein PTSG_08350 [Salpingoeca sp. ATCC 50818]
Length = 397
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG +PY+ +E ++I FS G++ N +L+ D+ TG+SKGF F + D + +V NL
Sbjct: 7 VWVGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLDAAAAESAVRNL 66
Query: 96 NGVKVLSRTIRVD 108
+G + R +RVD
Sbjct: 67 SGQPLRDRPLRVD 79
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 384 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 443
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 444 NGIKMGDKTLTVSRAN 459
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 329 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 388
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 389 NGIKMGDKTLTVRRAN 404
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 348 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 407
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
NG+K+ +T+ V N P
Sbjct: 408 NGIKMGDKTLTVRRANQGTP 427
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 436 NGIKMGDKTLTVRRAN 451
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 420 NGIKMGDKTLTVRRAN 435
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+++E +I +F G+++ L D+ TGK KG+ F + D + + +V NL
Sbjct: 7 VFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHETAMSAVRNL 66
Query: 96 NGVKVLSRTIRVD 108
NGV V R +R+D
Sbjct: 67 NGVDVGGRPLRID 79
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ LSSGS + IFVGGLPY +E + + +G + NLV+D+ TG
Sbjct: 358 LAAVGLSSGSTGGLEGPDR----IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 413
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
SKG+ F Y+D T ++ LNG+K+ +T+ V
Sbjct: 414 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 448
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 376 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 435
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 436 NGIKMGDKTLTVRRAN 451
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S+ +F+G L +D+SE DV FS++GE+ + L +D +G+ KGF ++ + Q S ++
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKD 118
D + G ++ R +R+ D+ P+D
Sbjct: 371 DAMTGQELAGRPLRL----DFSTPRD 392
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L +++ + +GE+ + + D+ +GKS+GF ++ + + + D
Sbjct: 215 IWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTSGKSRGFGYVDFATAAAAKKAFDEG 274
Query: 96 NGVKVLSRTIRVD 108
G +V R IR+D
Sbjct: 275 QGKEVDGRAIRID 287
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 13/84 (15%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
KD +F+GGL +D SE ++ FSQ+GE+V+ ++RD TGKS+GF F+ ++D +S
Sbjct: 158 KDHGKMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKS--- 214
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYK 114
+ I+ DH+ D K
Sbjct: 215 ----------VEEVIKRDHILDGK 228
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
IFVGG+ ++E + FSQ+G I++ L+ DK TG+S+GF FI Y+
Sbjct: 247 IFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYD 294
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 420 NGIKMGDKTLTVRRAN 435
>gi|116074289|ref|ZP_01471551.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
RS9916]
gi|116069594|gb|EAU75346.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
RS9916]
Length = 191
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + D+I +F+ +GE+ N L ++ TG+ +GF FI D+ ++D L
Sbjct: 3 IFVGNLPFRAEQEDIIELFAAHGEVTNCALPLERDTGRKRGFAFIEMADEAMETAAIDAL 62
Query: 96 NGVKVLSRTIRVD 108
GV+++ R +R++
Sbjct: 63 QGVELMGRPLRIN 75
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 53/79 (67%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A ++VG L ++L+E D+ +F +GE+ ++L +D +TG+SKG+ F+ Y+ ++++
Sbjct: 355 AILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALE 414
Query: 94 NLNGVKVLSRTIRVDHVND 112
+ G ++ RT+RV+ V++
Sbjct: 415 QMEGFELAGRTLRVNTVHE 433
>gi|378731681|gb|EHY58140.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 293
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P++LSE +++ I S G +V L+ + TGKSKGF F ++D S +V NL
Sbjct: 9 VFVGNIPFNLSEENIVKILSYAGTVVKFRLMTNPETGKSKGFGFADFQDADSAANAVRNL 68
Query: 96 NGVKVLSRTIRVD--HVNDYKPPKDN 119
N ++ R IRVD H N+ P N
Sbjct: 69 NDFEIDGRKIRVDWPHNNEKDAPPTN 94
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
gi|297312833|gb|EFH43256.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 355 IFVGGLPYYFTESQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 414
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 415 NGIKMGDKTLTVRRAN 430
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG + Y +E + +FSQYGE+ ++ L+ D+ TG++KGF F+ D + + +++ L
Sbjct: 3 IYVGNMSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEEL 62
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
NG + RT+R +N+ KP
Sbjct: 63 NGKEYDGRTLR---INEAKP 79
>gi|298246745|ref|ZP_06970550.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297549404|gb|EFH83270.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 109
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VGGLPY +E D+I +F Q G++ ++ D+ TG+SKGF F+ ++++ L
Sbjct: 3 IYVGGLPYQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARVAIEQL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPP 116
NG + +RTI V+ + + P
Sbjct: 63 NGSTLGNRTITVNEARERRAP 83
>gi|209364023|ref|YP_001424629.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
gi|207081956|gb|ABS78255.2| glycine-rich RNA-binding protein [Coxiella burnetii Dugway
5J108-111]
Length = 112
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 11 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 70
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 71 NGIDLQGRKIRVN 83
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 382 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 441
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 442 NGIKMGDKTLTVRRAN 457
>gi|313240680|emb|CBY33001.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P+ +E D+I +FS +GE+V ++ D+ TG+ +G F + D+ S ++D L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 96 NGVKVLSRTIRVDHV 110
NG R +RVDH
Sbjct: 147 NGQDFNGRALRVDHA 161
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 360 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 419
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 420 NGIKMGDKTLTVRRAN 435
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
+S G K S + +FVG + YD++E + IF++ G ++++ +V D+ TGK KG+
Sbjct: 2 MSGGYKPSGQLNERSQRSVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGY 61
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
FI + D + ++ LNG ++ R +RVD
Sbjct: 62 GFIEFPDINTADTAIRVLNGYELGGRVLRVD 92
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GGL + + +G + F+ YGE+ ++ D+ TG+S+GF F+ +E+ +V +
Sbjct: 12 LFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGM 71
Query: 96 NGVKVLSRTIRVDHVND 112
+G ++ R+IRVD+ +D
Sbjct: 72 DGHELGGRSIRVDYASD 88
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 339 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 398
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 399 NGIKMGDKTLTVRRAN 414
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY LSE ++ + S +G + +LV+D+ TG SKG+ F Y+D ++ L
Sbjct: 288 IFVGGLPYYLSEEQIMDLLSSFGHLRAFDLVKDRDTGNSKGYGFCVYQDPSVMDIACAAL 347
Query: 96 NGVKVLSRTIRV 107
NG+K+ RT+ V
Sbjct: 348 NGLKMGDRTLTV 359
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 52/77 (67%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +GE+ ++L RD TG+SKG+ F+ Y+ ++++ +
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQM 415
Query: 96 NGVKVLSRTIRVDHVND 112
+G ++ RT+RV+ VN+
Sbjct: 416 DGFELAGRTLRVNSVNE 432
>gi|342874383|gb|EGU76397.1| hypothetical protein FOXB_13075 [Fusarium oxysporum Fo5176]
Length = 293
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY L+E + IFS G++ LV D TG+ KGF F Y D S +V NL
Sbjct: 10 VFVGNIPYGLTEEQITDIFSSAGKVERFRLVYDPETGRPKGFGFADYPDTDSASSAVRNL 69
Query: 96 NGVKVLSRTIRVDHVN 111
N +++ R +RVD N
Sbjct: 70 NDFEIMGRKLRVDFSN 85
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 340 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 399
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 400 NGIKMGDKTLTVRRAN 415
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + + +LVRDK TG SKG+ F Y+D T ++ +L
Sbjct: 301 IFVGGLPYYFAEEQIRELLQAFGPLRSFDLVRDKETGNSKGYGFCIYQDPAVTDMACASL 360
Query: 96 NGVKVLSRTIRV 107
NG+KV +T+ V
Sbjct: 361 NGLKVGDKTLTV 372
>gi|238499667|ref|XP_002381068.1| RNA binding protein (Rbm8A), putative [Aspergillus flavus NRRL3357]
gi|220692821|gb|EED49167.1| RNA binding protein (Rbm8A), putative [Aspergillus flavus NRRL3357]
gi|391869313|gb|EIT78512.1| RNA-binding protein RBM8/Tsunagi [Aspergillus oryzae 3.042]
Length = 160
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 34 AWIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y ++
Sbjct: 42 GWIVIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEATEAI 101
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
NLNG K+L +TI+VD+ +PP NK
Sbjct: 102 KNLNGTKLLDQTIQVDYAF-VRPPPSNK 128
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + ++V+D+ TG SKG+ F Y+D T ++ L
Sbjct: 321 IFVGGLPYYFTEAQVQELLETFGPLRGFDIVKDRETGNSKGYAFCVYQDLAVTDIACAAL 380
Query: 96 NGVKVLSRTIRVDHVN 111
NG+++ RT+ V N
Sbjct: 381 NGIQLGDRTLTVRRAN 396
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 16 QELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSK 75
+E S G TS + ++VG + + +SE D+ IF +GE+++L L +D TG+S+
Sbjct: 288 EEWSGGGDTSPNSNPLTFTKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSR 347
Query: 76 GFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
GF F+ Y++ + + LNG+ + R ++V E +KL+ +G
Sbjct: 348 GFGFVQYKNHEDAKKAFEQLNGLDLAGRPLKVG------------LATAEAQKLQVLGAI 395
Query: 136 PGTEFGSI 143
P G+I
Sbjct: 396 PSGVPGTI 403
>gi|31201653|ref|XP_309774.1| AGAP010918-PA [Anopheles gambiae str. PEST]
gi|21293399|gb|EAA05544.1| AGAP010918-PA [Anopheles gambiae str. PEST]
Length = 393
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 27 HDQY---KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
HDQ K +FVG +PY+ +E + IF + G +++L LV D+ +GK KG+ F Y+
Sbjct: 4 HDQTLMDKSMRSVFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYK 63
Query: 84 DQRSTVLSVDNLNGVKVLSRTIRVDHV 110
DQ + + ++ NLNG + R +RVD+
Sbjct: 64 DQETALSAMRNLNGYEFGGRALRVDNA 90
>gi|313224670|emb|CBY20461.1| unnamed protein product [Oikopleura dioica]
Length = 164
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P+ +E D+I +FS +GE+V ++ D+ TG+ +G F + D+ S ++D L
Sbjct: 87 VFVGNIPWSATENDLIDLFSAHGEVVKFRILTDRETGRPRGMGFCEFSDEASCQQAIDGL 146
Query: 96 NGVKVLSRTIRVDHV 110
NG R +RVDH
Sbjct: 147 NGQDFNGRALRVDHA 161
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +GE+ ++L RD +TG+SKG+ F+ Y+ ++++ +
Sbjct: 120 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQM 179
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEET 126
G ++ RT+RV+ V++ +YT ++T
Sbjct: 180 EGFELAGRTLRVNTVHE---KGSTRYTQQDT 207
>gi|153208628|ref|ZP_01946885.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
gi|120575889|gb|EAX32513.1| RNA-binding protein [Coxiella burnetii 'MSU Goat Q177']
Length = 103
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 66 NGIDLQGRKIRVN 78
>gi|165919016|ref|ZP_02219102.1| RNA-binding protein [Coxiella burnetii Q321]
gi|165917271|gb|EDR35875.1| RNA-binding protein [Coxiella burnetii Q321]
Length = 107
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 66 NGIDLQGRKIRVN 78
>gi|161830439|ref|YP_001597044.1| RNA-binding protein [Coxiella burnetii RSA 331]
gi|161762306|gb|ABX77948.1| RNA-binding protein [Coxiella burnetii RSA 331]
Length = 107
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 6 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 65
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 66 NGIDLQGRKIRVN 78
>gi|302683536|ref|XP_003031449.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
gi|300105141|gb|EFI96546.1| hypothetical protein SCHCODRAFT_257523 [Schizophyllum commune H4-8]
Length = 324
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY++SE ++I +F GE+ LV D+ TGK +G+ F + D + + +V
Sbjct: 5 SKVVFVGNVPYNMSEDELIDVFKNVGEVAGFRLVFDRETGKPRGYGFCEFTDHDTALSAV 64
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNKYT 122
NLN ++V R +R+D + D P + K T
Sbjct: 65 RNLNNIEVKGRNLRID-LADSDPQLEGKTT 93
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PYD +E + IF + G + L LV ++ TGK KG+ F+ ++D + + +V NL
Sbjct: 6 VFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSAVRNL 65
Query: 96 NGVKVLSRTIRVDHVNDYK 114
NG + R +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLP+ + E D+ FS+YGE+V+ +V ++ TG+S+GF F+ Y + S + L
Sbjct: 9 VFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECIAAL 68
Query: 96 NGVKVLSRTIRVD 108
+G + RTIRV+
Sbjct: 69 DGQDMQGRTIRVN 81
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 382 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 441
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 442 NGIKMGDKTLTVRRAN 457
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+ +GE+ N +L ++ TG+ +GF FI D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|384915859|ref|ZP_10016064.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
gi|384526721|emb|CCG91935.1| RNA-binding protein, RRM domain (modular protein)
[Methylacidiphilum fumariolicum SolV]
Length = 255
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LPY+L++ D+ IF++ G I N+ ++RD+ T ++KGF F+ D S +V L
Sbjct: 171 LYVGNLPYNLTDSDLFEIFAKVGPIKNVEIIRDRRTNRTKGFGFVEMADLDSARKAVTIL 230
Query: 96 NGVKVLSRTIRV 107
N ++V+ R I V
Sbjct: 231 NRIEVMGRRIIV 242
>gi|126656762|ref|ZP_01727976.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126621982|gb|EAZ92690.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 83
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LPY+++E D+ +FS YG + +++ D+ TG+ +GF F+ E + + +++ L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELETKANEFNAIETL 62
Query: 96 NGVKVLSRTIRVDHVNDYK 114
NG + + RT++VD + K
Sbjct: 63 NGAEWMGRTMKVDEARERK 81
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 23 KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICY 82
+ S H ++ IFVG LPYD+SE + F + G I + LVRD+ +G KGF ++ +
Sbjct: 240 RVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLF 299
Query: 83 EDQRSTVLSVDNLNGVKVLSRTIRV 107
E S +L++ LNG + R IRV
Sbjct: 300 ESPDSVMLAL-KLNGSTLQQRKIRV 323
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
+D +NG + R IRVD
Sbjct: 63 LDAMNGKTLDGRAIRVDEA 81
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|75318082|sp|O23212.2|U2A2A_ARATH RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|18087531|gb|AAL58899.1|AF462805_1 At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|4006898|emb|CAB16828.1| splicing factor-like protein [Arabidopsis thaliana]
gi|7270617|emb|CAB80335.1| splicing factor-like protein [Arabidopsis thaliana]
gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|24030414|gb|AAN41365.1| putative splicing factor [Arabidopsis thaliana]
gi|332661287|gb|AEE86687.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 573
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 421 NGIKMGDKTLTVRRAN 436
>gi|324532508|gb|ADY49239.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 115
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG +PY+ SE DV FSQ G +VN+ LV D+ TG+ KGF F + D+ S +++ L
Sbjct: 39 VYVGNIPYNCSEMDVGNFFSQAGPVVNVRLVYDRDTGRPKGFGFCDFADEISAQGAINTL 98
Query: 96 NGVKVLSRTIRVDHVN 111
NG R +RV+ N
Sbjct: 99 NGADFNGRALRVNWAN 114
>gi|426196755|gb|EKV46683.1| hypothetical protein AGABI2DRAFT_206147 [Agaricus bisporus var.
bisporus H97]
Length = 558
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLP L+E V+ + +GE+ NLVR+ TG SKGF F Y DQ T +++ +L
Sbjct: 315 VFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGTGTSKGFAFFEYVDQAVTDVAIQSL 374
Query: 96 NGVKVLSRTIRV 107
NG+++ R + V
Sbjct: 375 NGMELGDRYLVV 386
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661290|gb|AEE86690.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 551
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 339 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 398
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 399 NGIKMGDKTLTVRRAN 414
>gi|388583458|gb|EIM23760.1| hypothetical protein WALSEDRAFT_53459 [Wallemia sebi CBS 633.66]
Length = 306
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 29 QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
Q S +FVG LPYD++E +V+ IFS+ G + + + DK TGK KG+ F+ Y D +
Sbjct: 7 QLLGSKIVFVGNLPYDINEEEVVRIFSEVGPVKDFRMNFDKHTGKPKGYGFVEYYDGDTA 66
Query: 89 VLSVDNLNGVKVLSRTIRVDHVND 112
+V NL+ V R +RVD D
Sbjct: 67 ASAVRNLHDNPVGGRPLRVDLAPD 90
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 320 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 379
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 380 NGIKMGDKTLTVRRAN 395
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 396 NGIKMGDKTLTVRRAN 411
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 336 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 395
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 396 NGIKMGDKTLTVRRAN 411
>gi|400599253|gb|EJP66957.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 316
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY LSE + IFS G++ LV D TG+ KGF F Y D S +V
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSDAGKVERFRLVYDAETGRPKGFGFAEYPDTDSASSAV 66
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNKYT 122
NLN +++ R +RVD ++ K D+ YT
Sbjct: 67 RNLNDHEIMGRKLRVDFSHEQK-VADDDYT 95
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 378 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 437
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 438 NGIKMGDKTLTVRRAN 453
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RD+ T KS+GF F+ Y++ +
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVN 111
+D +NG + RTIRVD
Sbjct: 63 MDGMNGQTLDGRTIRVDEAG 82
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 23 KTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICY 82
+ S H ++ IFVG LPYD+SE + F + G I + LVRD+ +G KGF ++ +
Sbjct: 241 RVSQHSKHDHKRSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLF 300
Query: 83 EDQRSTVLSVDNLNGVKVLSRTIRV 107
E S +L++ LNG + R IRV
Sbjct: 301 ESPDSVMLAL-KLNGSTLQQRKIRV 324
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L LSSGS + IFVGGLPY +E + + +G + NLV+D+ TG
Sbjct: 358 LGAVGLSSGSTGGLEGPDR----IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 413
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
SKG+ F Y+D T ++ LNG+K+ +T+ V
Sbjct: 414 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 448
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L LSSGS + IFVGGLPY +E + + +G + NLV+D+ TG
Sbjct: 358 LGAVGLSSGSTGGLEGPDR----IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 413
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
SKG+ F Y+D T ++ LNG+K+ +T+ V
Sbjct: 414 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 448
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G +V R +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|448079287|ref|XP_004194363.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
gi|359375785|emb|CCE86367.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +P+D +E V+ I G +++L L+ D +TGKSKG+ F+ Y D + +V NL
Sbjct: 9 VYIGNIPFDHTEEQVLEIARSVGPVLDLKLLFDSMTGKSKGYAFVRYSDHETAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFG-SILPVKT 148
N + + +R+++ ND DN D+ P FG + P +T
Sbjct: 69 NNLTIGNRSLKCSFSNDNSSFNDNSSVDK----------LPALPFGVQLFPNQT 112
>gi|168044555|ref|XP_001774746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673901|gb|EDQ60417.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 54/79 (68%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ + VGGL Y+ SE V F ++GE+V++ +V D+ +G+S+GF F+ + + RS ++
Sbjct: 3 DANSVHVGGLSYESSEDAVKKAFIEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
+ +++G ++ RTIRV+ V
Sbjct: 63 IRDMDGGQIEGRTIRVNEV 81
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 221 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 280
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 281 EAISALDGQNLEGRAIRVN-VAEERPPR 307
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 109 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 168
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 169 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 205
>gi|397632370|gb|EJK70525.1| hypothetical protein THAOC_08111, partial [Thalassiosira oceanica]
Length = 548
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
A +F+ LP DL++ D+ F+ +G +++ + D+ TG+SKGF F+ Y+ S L++
Sbjct: 370 GANLFIYHLPIDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVMSAELAI 429
Query: 93 DNLNGVKVLSRTIRVDHVN-DYKPPKDN 119
+ +NG ++ ++ ++V H ++PP+ N
Sbjct: 430 EQMNGFQIGNKRLKVQHKRVSHRPPQTN 457
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P L E D+ +F YG IV+L ++RD+ +G +G F+ +E + V ++
Sbjct: 25 LFVGQVPKTLIEEDLAYVFEPYGPIVDLTVIRDRRSGNHRGCAFVTFESGEDAMRVVADM 84
Query: 96 NG 97
+G
Sbjct: 85 HG 86
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLV--RDKITGKSKGFCFICYEDQRSTVLSVD 93
+FVG LP D E V +F+ YG IV+++++ R+ G F+ Y ++ +++
Sbjct: 123 LFVGQLPRDAEEDFVRDLFAPYGSIVSVHIIRKRNPDAAARNGCAFVKYRERSMAERAIE 182
Query: 94 NLNG---VKVLSRTIRVDHVN 111
L+G ++ + R ++V N
Sbjct: 183 ALDGELQLEGVDRPLKVKFAN 203
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 361 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 420
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 421 NGIKMGDKTLTVRRAN 436
>gi|212212428|ref|YP_002303364.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuG_Q212]
gi|212010838|gb|ACJ18219.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuG_Q212]
Length = 121
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 20 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 79
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 80 NGIDLQGRKIRVN 92
>gi|212218608|ref|YP_002305395.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuK_Q154]
gi|215919123|ref|NP_820178.2| nucleic acid binding domain-containing protein [Coxiella burnetii
RSA 493]
gi|206584008|gb|AAO90692.2| glycine-rich RNA-binding protein [Coxiella burnetii RSA 493]
gi|212012870|gb|ACJ20250.1| glycine-rich RNA-binding protein [Coxiella burnetii CbuK_Q154]
Length = 117
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++ ++ F QYGEI L+ D+ TG+SKGF FI Y Q + +V
Sbjct: 20 IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSKA 79
Query: 96 NGVKVLSRTIRVD 108
NG+ + R IRV+
Sbjct: 80 NGIDLQGRKIRVN 92
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A ++VG L + L++ +V +F +GEI ++L R+ TGKSKGFCFI ++ +++
Sbjct: 427 ARLYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALE 486
Query: 94 NLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILP 145
+NG ++ R IRV +VN Y++ G PG+E G LP
Sbjct: 487 QMNGFELAGRAIRVGNVNAKGTGSAGSYSN---------GSCPGSEGGGHLP 529
>gi|168067714|ref|XP_001785753.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662601|gb|EDQ49434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 79
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 54/77 (70%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VGGL Y+ +E V F +GE++++ +V DK++G+S+GF F+ + +QRS ++
Sbjct: 3 DANSVYVGGLSYESTEDTVRKHFMTFGEVLSVKIVHDKMSGESRGFGFVTFANQRSASMA 62
Query: 92 VDNLNGVKVLSRTIRVD 108
+ + +GV++ R IRV+
Sbjct: 63 ISDGDGVQIEGRCIRVN 79
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L LSSGS + IFVGGLPY +E + + +G + NLV+D+ TG
Sbjct: 337 LGAVGLSSGSTGGLEGPDR----IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETG 392
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
SKG+ F Y+D T ++ LNG+K+ +T+ V
Sbjct: 393 NSKGYAFCVYQDPSVTDIACAALNGIKMGDKTLTV 427
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661288|gb|AEE86688.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 565
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 96 NGVKVLSRTIRVDHVND----YKPPKDN 119
NG+K+ +T+ V N KP ++N
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQEN 448
>gi|393244579|gb|EJD52091.1| hypothetical protein AURDEDRAFT_142864 [Auricularia delicata
TFB-10046 SS5]
Length = 334
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY++ E +I +F G++V LV D+ TGK +G+ F + D + + +V NL
Sbjct: 9 VFVGNVPYNMGEEQLIDVFKNVGQVVGFRLVFDRETGKPRGYGFCEFADHETAMSAVRNL 68
Query: 96 NGVKVLSRTIRVD 108
N V V R +R+D
Sbjct: 69 NNVIVDGRPLRID 81
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ WI G LP+D +E + F +YG++ ++ L D+ TG +KGF ++ + D +
Sbjct: 302 DTLWI--GSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAA 359
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ LNG + SR IR+ D+ PPK
Sbjct: 360 LEALNGSEFGSRRIRI----DFAPPK 381
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGL +++ + F+ GE+V+ +V D+ T +S+GF ++ + D S + +++
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFADVDSAIKAIE-F 264
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
G ++ R +RV+ N KP D +
Sbjct: 265 EGKELDGRAVRVNFANARKPDADKR 289
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 356 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 415
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 416 NGIKMGDKTLTVRRAN 431
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 353 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 412
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 413 NGIKMGDKTLTVRRAN 428
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 346 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 405
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 406 NGIKMGDKTLTVRRAN 421
>gi|448083879|ref|XP_004195464.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
gi|359376886|emb|CCE85269.1| Piso0_004851 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +P+D +E V+ I G +++L L+ D +TGKSKG+ F+ Y D + +V NL
Sbjct: 9 VYIGNIPFDHTEEQVLDIARSVGPVLDLKLLFDSMTGKSKGYAFVRYSDHETAASAVRNL 68
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFG-SILPVKT 148
N + + +R+++ ND DN D+ P FG + P +T
Sbjct: 69 NNLTIGNRSLKCSFSNDNSSFNDNSSVDK----------LPALPFGVQLFPNQT 112
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+E + +G I + +LV+D+ TG SKG+ F+ Y+D T ++ L
Sbjct: 320 IFVGGLPYYLTEEQCRELLGSFGPIKSFDLVKDRETGNSKGYGFVVYQDSAVTDIACAGL 379
Query: 96 NGVKVLSRTIRV 107
NG+++ RT+ V
Sbjct: 380 NGLRMGDRTLTV 391
>gi|157112564|ref|XP_001657567.1| hypothetical protein AaeL_AAEL006197 [Aedes aegypti]
gi|108878012|gb|EAT42237.1| AAEL006197-PA [Aedes aegypti]
Length = 207
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++ LP+DL+ DV IF +YG++V + ++RDK T KSKG F+ + + + L +L
Sbjct: 13 VYASSLPFDLTNIDVRKIFEKYGQVVRVTILRDKQTRKSKGVAFVLFSNAKEADLCCTSL 72
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKK 128
N V++ RT++V KDN DE K+
Sbjct: 73 NNVEMFGRTLKVSIA------KDNGKADEFAKR 99
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|19310597|gb|AAL85029.1| putative splicing factor [Arabidopsis thaliana]
gi|332661289|gb|AEE86689.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 542
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 96 NGVKVLSRTIRVDHVND----YKPPKDN 119
NG+K+ +T+ V N KP ++N
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQEN 448
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 308 LAAVGLTAGSNGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 363
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 364 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 402
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 308 LAAVGLTAGSNGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 363
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 364 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 402
>gi|426194040|gb|EKV43972.1| hypothetical protein AGABI2DRAFT_194877 [Agaricus bisporus var.
bisporus H97]
Length = 341
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY++ E +I +F G+++ LV D+ TGK +G+ F + D + + +V
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 93 DNLNGVKVLSRTIRVD 108
NLN V V R +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 308 LAAVGLTAGSNGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 363
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 364 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 402
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 314 LAAVGLTAGSTGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 369
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 370 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 408
>gi|169779063|ref|XP_001823996.1| RNA-binding protein 8A [Aspergillus oryzae RIB40]
gi|83772735|dbj|BAE62863.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 160
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 34 AWIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y ++
Sbjct: 42 GWIVIATNIHEESSEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEATEAI 101
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
NLNG K+L +TI+VD+ +PP NK
Sbjct: 102 KNLNGTKLLDQTIQVDYAF-VRPPPSNK 128
>gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602071|ref|YP_966471.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153909|ref|YP_005702845.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450039|gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562300|gb|ABM28044.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234353|gb|ADP87207.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 89
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LP+ SE DV +F+ YGE+V++ L+ D+ TG+ +GF F+ D + +++ L
Sbjct: 5 LYVGNLPFSASEDDVRSLFTNYGEVVSVKLIMDRETGRPRGFGFVEMNDGDAGA-AIEAL 63
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
+G + R +RV+ + P
Sbjct: 64 DGADFMGRALRVNEAQERAP 83
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV +F+Q+GE+VN L ++ TG+ +GF F+ D + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L+++ TG+SKGF FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVNDY 113
NG ++ R ++V HV D+
Sbjct: 309 NGFELAGRPMKVGHVTDH 326
>gi|373958223|ref|ZP_09618183.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373894823|gb|EHQ30720.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 104
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPY + E ++ +F YGE+ +L ++ DK TG+SKGF F D+ S + ++++L
Sbjct: 3 IFIGNLPYKIQESELRELFEDYGELTSLKIITDKQTGQSKGFGFAEMPDRESALKALEDL 62
Query: 96 NGVKVLSRTIRV 107
N ++ R I V
Sbjct: 63 NAAEIYGRNIVV 74
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 96 NGVKVLSRTIRVDHVND----YKPPKDN 119
NG+K+ +T+ V N KP ++N
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQEN 448
>gi|33862287|ref|NP_893847.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9313]
gi|33640400|emb|CAE20189.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9313]
Length = 199
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+ +GE+ N L ++ TG+ +GF F+ D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAEMMGRPLRIN 75
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G L +D+SE DV FS++GE+ + L +D +G+ KGF ++ + Q S ++D +
Sbjct: 308 LFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAM 367
Query: 96 NGVKVLSRTIRVDH 109
G ++ R +R+D
Sbjct: 368 TGQELAGRPLRLDF 381
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L +++ + +GE+ + + D+ TGKS+GF ++ + + + +
Sbjct: 209 VWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEEG 268
Query: 96 NGVKVLSRTIRVD 108
G +V R IR+D
Sbjct: 269 QGKEVDGRAIRLD 281
>gi|313234527|emb|CBY10484.1| unnamed protein product [Oikopleura dioica]
Length = 333
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K + +FVG +PY+ +E + IF++ G +++ LV D+ TGK KG+ F Y+D + +
Sbjct: 22 KAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMS 81
Query: 91 SVDNLNGVKVLSRTIRVDHV 110
++ NLN ++ R +RVDH
Sbjct: 82 AMRNLNTRELHGRNLRVDHA 101
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL +D +E + FS+YG I N+++ R++ T +S+GF F+ +E+ +
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
++ +NG V RTIRVD
Sbjct: 63 LEGMNGKSVDGRTIRVDEA 81
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+EG + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 185 IFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAAL 244
Query: 96 NGVKVLSRTIRV 107
NG+K+ +T+ V
Sbjct: 245 NGLKMGDKTLTV 256
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 339 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 398
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 399 NGIKMGDKTLTVRRAN 414
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 357 IFVGGLPYYFTEAQVRELLESFGSLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 416
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 417 NGIKMGDKTLTVRRAN 432
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV +F+Q+GE+VN L ++ TG+ +GF F+ D + +++ L
Sbjct: 33 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 92
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 93 QGAELMGRPLRIN 105
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+EG + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 185 IFVGGLPYYLTEGQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVACAAL 244
Query: 96 NGVKVLSRTIRV 107
NG+K+ +T+ V
Sbjct: 245 NGLKMGDKTLTV 256
>gi|78778398|ref|YP_396510.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9312]
gi|78711897|gb|ABB49074.1| RNA-binding region RNP-1 [Prochlorococcus marinus str. MIT 9312]
Length = 222
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ DV+ +F+ +GE++N +L ++ TG+ +GF F+ D+ ++D L
Sbjct: 3 IFVGNLPFRAEREDVLQLFAPFGEVLNCSLPLERDTGRKRGFAFVEMADEAIESAAIDGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|357157437|ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G +V R +RVD
Sbjct: 73 QGYEVNGRQLRVD 85
>gi|298244419|ref|ZP_06968225.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
gi|297551900|gb|EFH85765.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM 44963]
Length = 106
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VGGLPY +E D+I +F Q G++ ++ D+ TG+SKGF F+ +++ L
Sbjct: 3 IYVGGLPYQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARAAIEQL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPP 116
NG + RTI V+ + + P
Sbjct: 63 NGSTLGDRTITVNEARERRAP 83
>gi|425448844|ref|ZP_18828688.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
gi|389767705|emb|CCI06977.1| putative RNA-binding protein rbpE [Microcystis aeruginosa PCC 7941]
Length = 97
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG L YD+S+ D++ +F +YG + +++ DK TG+ +GF F+ E++ +++ L
Sbjct: 3 IFVGNLSYDISQDDLVEVFKEYGNVQRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 96 NGVKVLSRTIRVDHVND 112
+G + + R+I+V+ D
Sbjct: 63 DGAEWMGRSIKVNEARD 79
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 59/102 (57%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+D +FVG +P+ +E + IFS+ G IV++ LV D TGK KGF F+ YED + +
Sbjct: 6 RDKNDVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALS 65
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTI 132
++ NLNG R +RV+ N+ + + ++ ++ RT+
Sbjct: 66 AIRNLNGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQQERTV 107
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 13/84 (15%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
KD +F+GGL +D SE ++ F+Q+GE+V+ ++RD TGKS+GF F+ ++D +S
Sbjct: 158 KDHGKMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKS--- 214
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYK 114
+ I+ DH+ D K
Sbjct: 215 ----------VEEVIKRDHILDGK 228
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
IFVGG+ ++E + FSQ+G I++ L+ DK TG+S+GF FI Y+
Sbjct: 247 IFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYD 294
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G++ +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 343 IFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAAL 402
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 403 NGIKMGDKTLTVRRAN 418
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
WH 8102]
Length = 214
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+Q+GE+ N L ++ TG+ +GF F+ D+ +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDAAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|71651508|ref|XP_814431.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879401|gb|EAN92580.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|133926106|gb|ABO43762.1| RNA binding protein 19 [Trypanosoma cruzi]
Length = 156
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 20 SGSKTS-WHDQYKDSAWIFVGGLPY-------DLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SG+ T +H SAWI V L + LSEGDV +FSQ+G +V++ +R + T
Sbjct: 14 SGAYTEEYHKLLGKSAWIVVRRLEHADAKSAVSLSEGDVATVFSQFGNVVDVRFLRHRRT 73
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLN 96
G+ G F+ +ED RS +L+ D +N
Sbjct: 74 GRFLGTAFVKFEDYRSAILAADEMN 98
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL YD +E + FS+YG I ++++RD+ T +S+GF F+ +E+ +
Sbjct: 3 DEGKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVN 111
+ +NG +V R IRVD
Sbjct: 63 MAAMNGKQVDGRMIRVDEAG 82
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FV +PYD+SE + +FS+ G + N+ + D TG+SKG+ F+ + D+ + + +V NL
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSAVRNL 68
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGT 138
V R +RV+ TDE + R G PGT
Sbjct: 69 QDAPVNGRNLRVEL-----------STDEPGPRRR--GAGPGT 98
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LPY E D+ F Q G +VN+ +V D+ TG+ +GF F +E + + +V ++
Sbjct: 5 IFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAVGSM 64
Query: 96 NGVKVLSRTIRVDHVN 111
N + R IRVD N
Sbjct: 65 NNADFMGRQIRVDRAN 80
>gi|338706322|ref|YP_004673090.1| putative RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|378972859|ref|YP_005221463.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378973926|ref|YP_005222532.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378974988|ref|YP_005223596.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
gi|378981835|ref|YP_005230140.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384421880|ref|YP_005631239.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|291059746|gb|ADD72481.1| glycine-rich RNA-binding protein 2 [Treponema pallidum subsp.
pallidum str. Chicago]
gi|335344383|gb|AEH40299.1| probable RNA-binding protein [Treponema paraluiscuniculi Cuniculi
A]
gi|374677182|gb|AEZ57475.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678252|gb|AEZ58544.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679321|gb|AEZ59612.1| putative RNA-binding protein [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680386|gb|AEZ60676.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
DAL-1]
Length = 89
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
SA I+VG L Y +E + +FSQ+GE++++ +++DK+T +SKGF F+ E S L +
Sbjct: 2 SAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVI 61
Query: 93 DNLNGVKVLSRTIRVDHVNDYKP 115
+ LN + R +RV++ + KP
Sbjct: 62 NELNEKEFEGRRLRVNYAEE-KP 83
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L Y+++E D+ FS+YGE+ + +VRDK T KSKG+ FI ++ S +
Sbjct: 83 LFVGRLNYEVTEIDLQKEFSKYGEVERVRVVRDKDTSKSKGYAFILFDHDSSAKAAYKEA 142
Query: 96 NGVKVLSRTIRVD 108
NG+K+ R I D
Sbjct: 143 NGLKIKGRAIITD 155
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LPY ++E ++ +F YGE+ ++++++DK+TG+SKGF F+ + +++ L
Sbjct: 3 IYVGNLPYKITENELRDLFGAYGEVSSVSMIKDKMTGQSKGFGFVDMPNAGEATAAINGL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKD 118
N V R I+ VN+ KP +D
Sbjct: 63 NEQAVQGRNIK---VNEAKPRED 82
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
+S G K S + +FVG + YD++E + +FS+ G ++++ +V D+ TGK KG+
Sbjct: 1 MSGGYKQSGLPNERSQRSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGY 60
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
FI + D ++ ++ LNG ++ R +RVD
Sbjct: 61 GFIEFPDIQTADTAIRVLNGHELGGRILRVD 91
>gi|71405649|ref|XP_805426.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70868830|gb|EAN83575.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 156
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
Query: 20 SGSKTS-WHDQYKDSAWIFVGGLPY-------DLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SG+ T +H SAWI V L + LSEGDV +FSQ+G +V++ +R + T
Sbjct: 14 SGAYTEEYHKLLGKSAWIVVRRLEHADAKSAVSLSEGDVATVFSQFGNVVDVRFLRHRRT 73
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLN 96
G+ G F+ +ED RS +L+ D +N
Sbjct: 74 GRFLGTAFVKFEDYRSAILAADEMN 98
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DVI +F+ +GE+ N L ++ TG+ +GF F+ D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAEMMGRPLRIN 75
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG + Y+ SE + I SQ G I++ +V D+ TGK KG+ F Y D + ++
Sbjct: 4 STTVFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAI 63
Query: 93 DNLNGVKVLSRTIRVD 108
NLNG ++ RT+RVD
Sbjct: 64 RNLNGTELNGRTLRVD 79
>gi|403376282|gb|EJY88118.1| RNA recognition motif (RRM)-containing protein [Oxytricha
trifallax]
Length = 1352
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
L N+K + K EQ S S QY+ IFVGGLP++LS+ + F+++G+I +
Sbjct: 436 LKNLKTLAKSREQSYKRSSIQSLDTQYRK---IFVGGLPHNLSDEEFRAFFAKFGDIEDC 492
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVK 99
+++DK TGK +GF F+ Y STV VD + +K
Sbjct: 493 AILKDKRTGKPRGFGFVTY----STVDQVDYVMNIK 524
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 29 QYKD-----SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
QY D SA +FVG + +D ++ V +F +YG I + L D+ TG KGF ++ +
Sbjct: 351 QYGDTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFS 410
Query: 84 DQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+++NL GV + R IR+D+ KPP++
Sbjct: 411 SIEEAKSAMENLTGVDIAGRPIRLDYSTP-KPPRE 444
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%)
Query: 11 KKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKI 70
K+ +E E SK + + + +FVG L +++ E + F ++G I + ++ D+
Sbjct: 230 KRKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRD 289
Query: 71 TGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+G+SKG+ ++ +E +++ +G + +R +RVD
Sbjct: 290 SGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVD 327
>gi|427703571|ref|YP_007046793.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427346739|gb|AFY29452.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 178
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV +F+ +GE+VN +L ++ TG+ +GF FI D + ++D L
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVVNCSLPLERDTGRKRGFAFIEMADADTETRAIDAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|409078041|gb|EKM78405.1| hypothetical protein AGABI1DRAFT_114691 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 341
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PY++ E +I +F G+++ LV D+ TGK +G+ F + D + + +V
Sbjct: 2 SKVVFVGNVPYNMGEDQLIDVFKSVGQVIGFRLVFDRETGKPRGYGFCEFADNETALSAV 61
Query: 93 DNLNGVKVLSRTIRVD 108
NLN V V R +R+D
Sbjct: 62 RNLNNVDVGGRPLRID 77
>gi|213403776|ref|XP_002172660.1| cleavage stimulation factor 64 kDa subunit [Schizosaccharomyces
japonicus yFS275]
gi|212000707|gb|EEB06367.1| cleavage stimulation factor 64 kDa subunit [Schizosaccharomyces
japonicus yFS275]
Length = 391
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
S ++VG +PY+++E V+ IF Q G + + +L+ D TG+ KG+ F Y D+ + V +
Sbjct: 3 PSCVVYVGNIPYEMAEEQVVDIFKQSGPVKSFHLMMDNETGQPKGYGFCEYHDRSTAVSA 62
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGC---APGTEFGSI-LPVK 147
V NL+ V +R +RVD T ++ ++L +G AP G++ PV
Sbjct: 63 VRNLHNYDVGTRRLRVDFP-----------TPDQIRRLEKMGAAQQAPPLAPGAVNAPVS 111
Query: 148 TEDIKQEKDS 157
+ + + S
Sbjct: 112 STPLPGQPGS 121
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 325 IFVGGLPYYFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 384
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 385 NGIKMGDKTLTVRRAN 400
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 154 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 213
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 214 NGIKMGDKTLTVRRAN 229
>gi|159473054|ref|XP_001694654.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158276466|gb|EDP02238.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 306
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+E + +G I + +LV+D+ TG SKG+ F+ Y+D T ++ L
Sbjct: 130 IFVGGLPYYLTEDQCRELLGSFGAIKSFDLVKDRDTGNSKGYGFVVYQDTSVTDIACAGL 189
Query: 96 NGVKVLSRTIRV 107
NG+K+ RT+ V
Sbjct: 190 NGLKMGDRTLTV 201
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E + IF + G ++++ LV D+ TGK KG+ F Y+D+ + + ++ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG R +RVD+
Sbjct: 78 NGYVFGGRPLRVDNA 92
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E + IF + G ++++ LV D+ TGK KG+ F Y+D+ + + ++ NL
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 96 NGVKVLSRTIRVDHV 110
NG R +RVD+
Sbjct: 78 NGYVFGGRPLRVDNA 92
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 166 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 225
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 226 NGIKMGDKTLTVRRAN 241
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 54/79 (68%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VGGL Y +E + F Q+GE+V++ +V D+ +G+S+GF F+ + + R+ ++
Sbjct: 3 DTNSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVA 62
Query: 92 VDNLNGVKVLSRTIRVDHV 110
+ +++G ++ RTIRV+ V
Sbjct: 63 IQDMDGRQIEGRTIRVNEV 81
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVD 108
+D +NG + R IRVD
Sbjct: 63 LDAMNGKTLDGRAIRVD 79
>gi|260796311|ref|XP_002593148.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|260796325|ref|XP_002593155.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
gi|229278372|gb|EEN49159.1| hypothetical protein BRAFLDRAFT_209787 [Branchiostoma floridae]
gi|229278379|gb|EEN49166.1| hypothetical protein BRAFLDRAFT_143355 [Branchiostoma floridae]
Length = 88
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFV GL + +E + +F++YG+IV + L++DKIT +S+GF FI +E+ R ++V +
Sbjct: 10 IFVAGLNLETNETTLEKLFNKYGKIVEVLLMKDKITARSRGFGFITFENPRDAEVAVKEM 69
Query: 96 NGVKVLSRTIRVDH 109
NG + + I+VD
Sbjct: 70 NGQDIAGKVIKVDR 83
>gi|409081516|gb|EKM81875.1| hypothetical protein AGABI1DRAFT_70425 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLP L+E V+ + +GE+ NLVR+ TG SKGF F Y DQ T +++ +L
Sbjct: 132 VFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENGTGTSKGFAFFEYVDQAVTDVAIQSL 191
Query: 96 NGVKVLSRTIRV 107
NG+++ R + V
Sbjct: 192 NGMELGDRYLVV 203
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A ++VG L ++L+E D+ +F +GE+ ++L +D TG+SKG+ FI Y+ ++++
Sbjct: 238 ATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFIHYKRAEDAKMALE 297
Query: 94 NLNGVKVLSRTIRVDHVND 112
+ G ++ RT+RV+ V++
Sbjct: 298 QMEGFELAGRTLRVNTVHE 316
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 155 IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 214
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 215 NGIKMGDKTLTVRRAN 230
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 52/77 (67%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +G++ ++L RD TG+SKG+ F+ Y+ ++++ +
Sbjct: 137 LYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQYKRPEDAKMALEQM 196
Query: 96 NGVKVLSRTIRVDHVND 112
+G ++ RT+RV+ V++
Sbjct: 197 DGFELAGRTLRVNTVHE 213
>gi|198438021|ref|XP_002129706.1| PREDICTED: similar to cold inducible RNA binding protein [Ciona
intestinalis]
Length = 469
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A IF+GGL D SE D+ F +G+I + ++RD+ T S+GF F+ +E Q S ++
Sbjct: 8 ARIFIGGLDLDCSEQDLEKAFGMFGDISQVMVLRDRETNVSRGFAFMSFESQDSADEAIR 67
Query: 94 NLNGVKVLSRTIRV 107
++GV+++ R + V
Sbjct: 68 RMHGVEIMGRCVTV 81
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 136 LAAVGLTAGSNGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 191
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 192 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 230
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
++ +NG + R IRVD K + N+
Sbjct: 63 LEGMNGKTLDGRAIRVDEAG--KGGRSNR 89
>gi|123967549|ref|YP_001008407.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. AS9601]
gi|123197659|gb|ABM69300.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. AS9601]
Length = 203
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ DVI +F+ +GE++N +L ++ TG+ +GF FI D+ ++D L
Sbjct: 3 IFVGNLPFRAEREDVIQLFAPFGEVLNCSLPLERDTGRKRGFAFIEMADEAIESTAIDGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGRELMGRPLRIN 75
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 9 NIKKLSEQELSSGSKTSWHDQYKDSA-----WIFVGGLPYDLSEGDVICIFSQYGEIVNL 63
NI K SEQ+ ++ +++ DSA +FVG L +D +E V +F ++G++ ++
Sbjct: 368 NIDK-SEQKDKGAAREKRAEKFGDSASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSV 426
Query: 64 NLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDN 119
L D+ TG+ KGF ++ + D + + + L+G +V R IR+ DY P+DN
Sbjct: 427 RLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPIRL----DYSQPRDN 478
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG L +++ + F++ GE+++ + D+ TGKS+GF ++ + + V + L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEA-VEAALLL 357
Query: 96 NGVKVLSRTIRVD 108
NG ++ R + +D
Sbjct: 358 NGKEIDGRPVNID 370
>gi|428309319|ref|YP_007120296.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428250931|gb|AFZ16890.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 101
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++E D+ +F++YG + N+ L +D+ TG+ +GF F+ +++ L
Sbjct: 3 IYVGNLSYDVTEEDIREVFAEYGTVNNVTLPKDRETGRKRGFAFVEMGTDEEETAAIEAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
+G + + R ++ VN KP +DNK
Sbjct: 63 DGAEWMGRNLK---VNKAKPREDNK 84
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 7 VKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
+ N+K+ + ++ GS Q A I+VG L Y LSE D+ +F +G IVN+++
Sbjct: 130 MPNMKQANVGQMM-GSSNIAPRQVTQGARIYVGSLDYSLSEADLRQVFGSFGTIVNIDMP 188
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
R+ +SKGFCFI Y Q S +++ +N + R I+V
Sbjct: 189 REG--NRSKGFCFIEYTTQESAEMALATMNRFVLKGRPIKV 227
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRD-KITGKSKGFCFICYEDQRSTVLSVDN 94
I++G +PY + D+ IF +G I++ L+ + G +G+ FI + L+++
Sbjct: 280 IYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVEKPGTHRGYGFIEFGTPDQAKLAIET 339
Query: 95 LNGVKVLSRTIRVDHVNDYKP 115
+NG +V + ++V+ KP
Sbjct: 340 MNGFEVGGKQLKVNVATALKP 360
>gi|367006043|ref|XP_003687753.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
gi|357526058|emb|CCE65319.1| hypothetical protein TPHA_0K01870 [Tetrapisispora phaffii CBS 4417]
Length = 289
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S I++G +PYD +E ++ + S G +VNL ++ D TG+SKG+ F+ Y+D ++ +V
Sbjct: 15 SRVIYIGSIPYDQTEEQILDLCSNVGPVVNLKMMFDPQTGRSKGYAFVEYKDLETSASAV 74
Query: 93 DNLNGVKVLSRTIRVDH 109
NLNG +V SR ++ +
Sbjct: 75 RNLNGYQVGSRLLKCGY 91
>gi|126695350|ref|YP_001090236.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9301]
gi|126542393|gb|ABO16635.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9301]
Length = 217
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ D I +F+ +GE++N +L ++ TG+ +GF FI D+ ++D L
Sbjct: 3 IFVGNLPFRAEREDAIQLFAPFGEVLNCSLPLERDTGRKRGFAFIEMADEAIESTAIDGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|359495190|ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 9 VFVGNIPYDATEEQLIQICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 96 NGVKVLSRTIRVDHVNDYK 114
G ++ R +RVD + K
Sbjct: 69 QGYEINGRQLRVDFAENDK 87
>gi|436841541|ref|YP_007325919.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432170447|emb|CCO23818.1| RNP-1 like RNA-binding protein [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 87
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LP+ SE DV F YGE++++ L+ D+ TG+ +GF F+ ED + ++DNL
Sbjct: 5 IYVGNLPWSASEDDVRAAFEAYGEVISVKLIEDRETGRPRGFGFVEMEDN-GALDAIDNL 63
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
+G R ++V+ P
Sbjct: 64 DGKDFGGRNLKVNEAKPRAP 83
>gi|413920210|gb|AFW60142.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 364
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 13 LSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITG 72
L+ L++GS + IFVGGLPY +E V + +G + +LV+D+ TG
Sbjct: 133 LAAVGLTAGSNGGLEGPDR----IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETG 188
Query: 73 KSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
SKG+ F Y+D T ++ LNG+K+ +T+ V N
Sbjct: 189 NSKGYAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRAN 227
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y +E D+ +F+ YGE+ + L D+ TG+ +GF F+ E+ ++ L
Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMEEDAQENAAITEL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
+G + + R +R VN KP +DN+ D
Sbjct: 63 DGAEWMGRQLR---VNKAKPREDNRLDD 87
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D ++D L
Sbjct: 264 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAMDQL 323
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 324 NGFELAGRPMRVGHVTE 340
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G L +D +E DV +F+Q+G + +NL+ DK+TG+++GF F+ + +V NL
Sbjct: 4 LYIGNLSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNL 63
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
NG + R + VN+ +P
Sbjct: 64 NGKQWQGRAL---TVNEARP 80
>gi|189219581|ref|YP_001940222.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
gi|189186439|gb|ACD83624.1| RNA-binding protein, RRM domain [Methylacidiphilum infernorum V4]
Length = 117
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%)
Query: 16 QELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSK 75
+EL S + +Q S ++VG LPY+L++ D+ IF++ G I N+ +VRD+ + ++K
Sbjct: 13 KELQSQPSSLSIEQAVTSNKLYVGNLPYNLTDSDLFEIFAKIGPIKNVEIVRDRKSNRTK 72
Query: 76 GFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
GF F+ D S + LNG++++ R I V
Sbjct: 73 GFGFVEMADLDSARKAATVLNGIEIMGRRIIV 104
>gi|15639347|ref|NP_218796.1| RNA-binding protein, [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025589|ref|YP_001933361.1| RNA-binding protein [Treponema pallidum subsp. pallidum SS14]
gi|408502236|ref|YP_006869680.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|3322634|gb|AAC65342.1| RNA-binding protein, putative [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018164|gb|ACD70782.1| possible RNA-binding protein [Treponema pallidum subsp. pallidum
SS14]
gi|408475599|gb|AFU66364.1| putative RNA-binding protein [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 105
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
SA I+VG L Y +E + +FSQ+GE++++ +++DK+T +SKGF F+ E S L +
Sbjct: 18 SAKIYVGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVI 77
Query: 93 DNLNGVKVLSRTIRVDHVNDYKP 115
+ LN + R +RV++ + KP
Sbjct: 78 NELNEKEFEGRRLRVNYAEE-KP 99
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GGLPY L+E + I S YG + NLV+D TG SKG+ F Y+D ++ L
Sbjct: 325 VFIGGLPYHLTEDQIKEILSSYGPLNAFNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGL 384
Query: 96 NGVKVLSRTIRV 107
NG+ + +T+ V
Sbjct: 385 NGMTMGDKTLTV 396
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV+ +FS +GE+ N +L ++ TG+ +GF F+ D+ ++++L
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 14 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 73
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 74 QGYEINGRQLRVD 86
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 29 QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
+Y +FVG LPYD+SE ++I F G + + +VRD TG SKGF F+ ++D +
Sbjct: 225 KYNCRTTVFVGNLPYDVSENELIAHFEMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSAAV 284
Query: 89 VLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTI 132
L++ L+G R +R V K Y + LRT+
Sbjct: 285 PLALQ-LDGSIFKRRPLRTKRVQKKNKVKSQTY----QRSLRTV 323
>gi|145341802|ref|XP_001415992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576215|gb|ABO94284.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 86
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +PYD +E + +F + G + L LV D+ TGK KG+ F+ ++D + + +V N+
Sbjct: 6 VFIGNIPYDATETSLRDVFGEVGPVRELRLVADRDTGKLKGYGFVEFDDYATAMSAVRNV 65
Query: 96 NGVKVLSRTIRVDHVNDYK 114
NG + R +RVDH K
Sbjct: 66 NGREYNGRQLRVDHAETMK 84
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV+ +FS +GE+ N +L ++ TG+ +GF F+ D+ ++++L
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|123965247|ref|YP_001010328.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199613|gb|ABM71221.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9515]
Length = 222
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ D++ +F+ YGE++N +L ++ TG+ +GF F+ D+ +++ L
Sbjct: 3 IFVGNLPFRAEREDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALETTAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 69 QGYEINGRQLRVD 81
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYD +E ++ +F ++GEI + +VRDK+T KSKG+ FI + D S+ ++ +
Sbjct: 108 IFIGRLPYDTTELELQKLFVKFGEIEKIRIVRDKLTNKSKGYAFIVFLDPMSSKMAFKEI 167
Query: 96 N---GVKVLSRTIRVD 108
G+ + RT VD
Sbjct: 168 GVHRGIDIKGRTCIVD 183
>gi|242018247|ref|XP_002429590.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
gi|212514557|gb|EEB16852.1| A-kinase anchor protein, putative [Pediculus humanus corporis]
Length = 408
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P+DL+E + IFS+ G +++ LV D+ GK KG+ F Y+D + ++ NL
Sbjct: 16 VFVGNIPFDLTEEKLKEIFSEVGPVLSFKLVYDRENGKPKGYGFCEYKDIETANSAMRNL 75
Query: 96 NGVKVLSRTIRVDHVNDYK 114
NG ++ R ++VD+ + K
Sbjct: 76 NGFEIGGRVLKVDNAANEK 94
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L + L+E ++ +F +GE+ ++L RD TG+SKG+CFI Y ++++ +
Sbjct: 307 LYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDPATGRSKGYCFIQYRRPEDAKMALEQM 366
Query: 96 NGVKVLSRTIRVDHVND 112
+G ++ R +RV+ V++
Sbjct: 367 DGFELAGRQLRVNTVHE 383
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 182 IFVGGLPYYFTEAQIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 241
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 242 NGIKMGDKTLTVRRAN 257
>gi|338729372|ref|XP_001492640.3| PREDICTED: cleavage stimulation factor subunit 2 [Equus caballus]
Length = 601
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVN----LNLVRDKITGKSKGFCFICYEDQRSTVLS 91
+FVG +PY+ +E + +FS+ G +V+ + LV D+ TGK KG+ F Y+DQ + + +
Sbjct: 18 VFVGNIPYEATEEQLKDVFSEVGPVVSSGRVIRLVYDRETGKPKGYGFCEYQDQETALSA 77
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTEFGSILPVKT--E 149
+ NLNG + R +RVD+ K NK EE K L T + +G + + E
Sbjct: 78 MRNLNGREFSGRALRVDNAASEK----NK---EELKSLGTGAPVIESPYGETISPEDAPE 130
Query: 150 DIKQEKDSKPTE 161
I + S P E
Sbjct: 131 SISKAVASLPPE 142
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
PL V+ + E S D++ + +FVG LP+ + + +F Q G +
Sbjct: 48 FRPLEPVRAAATAAVTEELEAEGRSGGDEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSV 107
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
+ ++ DK+TG+S+GF F+ ++VD NG + R++RV+ + PP+D
Sbjct: 108 EMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVN--SGPPPPRD 163
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VG L + + + +FS+ GE++ ++ D+ +G+S+GF F+ Y +
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
+ NL+G + R IRV V + KPP+
Sbjct: 235 ISNLDGADLDGRQIRV-TVAESKPPR 259
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 181 IFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 240
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 241 NGIKMGDKTLTVRRAN 256
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 240 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 299
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 300 EAISALDGQNLEGRAIRVN-VAEERPPR 326
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 128 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 187
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 188 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 224
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 10 VFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 69
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 70 QGYEINGRQLRVD 82
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAW--IFVGGLPYDLSEGDVICIFSQYGEIVNLNL 65
KN + +E LSSG + S D+ + ++VG + ++L+E D+ IF +GE+ + L
Sbjct: 204 KNRQAKAEAMLSSGGRQS------DAPFHRLYVGNIHFNLTEDDLRQIFEPFGELEFVQL 257
Query: 66 VRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
++ TG+S+G+ F+ Y D +++ +NG ++ R IRV ND K+T E
Sbjct: 258 QKEPDTGRSRGYGFVQYRDPAQARDALEKMNGFELAGRAIRVGLGND-------KFTPES 310
Query: 126 T 126
T
Sbjct: 311 T 311
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 226 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 285
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 286 EAISALDGQNLEGRAIRVN-VAEERPPR 312
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 114 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 173
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 174 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 210
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 240 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 299
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 300 EAISALDGQNLEGRAIRVN-VAEERPPR 326
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 128 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 187
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 188 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 224
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 50/74 (67%)
Query: 37 FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLN 96
FVGGL + + ++ FSQ+GE+++ ++ D+ TG+S+GF F+ ++D++S ++D +N
Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68
Query: 97 GVKVLSRTIRVDHV 110
G ++ RTI V+
Sbjct: 69 GKELDGRTITVNEA 82
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E +I I + G +V+ LV D+ TGK KG+ F Y+D+ + + + NL
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 71 QGYEINGRQLRVD 83
>gi|358368797|dbj|GAA85413.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 164
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 34 AWIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y ++
Sbjct: 45 GWIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEASEAI 104
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
LNG K+L +TI+VD PP +NK
Sbjct: 105 KALNGSKLLDQTIQVDFAFVRPPPSNNK 132
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 49/73 (67%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LPY+++E D+ +FS YG + +++ D+ TG+ +GF F+ E + + +++ L
Sbjct: 3 IYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIETL 62
Query: 96 NGVKVLSRTIRVD 108
+G + + RT++VD
Sbjct: 63 DGAEWMGRTMKVD 75
>gi|50286493|ref|XP_445675.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524980|emb|CAG58586.1| unnamed protein product [Candida glabrata]
Length = 280
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G +V+L ++ D TGKSKG+ F+ Y+D S+ +V NL
Sbjct: 18 VYLGSIPYDQTEEQILDLCSNVGPVVSLKMMFDSQTGKSKGYAFVQYQDLESSASAVRNL 77
Query: 96 NGVKVLSRTIRVDH 109
NG ++ SR ++ +
Sbjct: 78 NGYQLGSRLLKCGY 91
>gi|226528788|ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 309 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 368
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 369 NGFELAGRPMRVGHVTE 385
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+E + + +G + +LV+D+ TG SKG+ F Y+D T +++ L
Sbjct: 281 IFVGGLPYYLTEIQIKELLESFGPLRGFDLVKDRDTGNSKGYGFCVYQDPAVTDVAIAAL 340
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
NG+K+ +T+ V + PK ++
Sbjct: 341 NGLKMGDKTLSVRRASASGQPKPDQ 365
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|373955307|ref|ZP_09615267.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373891907|gb|EHQ27804.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + E ++ +F ++GE+ + ++ D+ TG+SKGF FI D + ++ +
Sbjct: 3 IFVGSLPFKVEESELKEVFEEFGEVTTVKIITDRETGRSKGFGFIEMPDDEAAQKAISEV 62
Query: 96 NGVKVLSRTIRVDHVNDYK 114
NG ++ RTI V+ + K
Sbjct: 63 NGAELYGRTIVVNQAEEKK 81
>gi|317968520|ref|ZP_07969910.1| RNA recognition motif-containing protein [Synechococcus sp. CB0205]
Length = 157
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV +F+ +GE+ N +L ++ TG+ +GF F+ D S ++D L
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVANCSLPLERDTGRKRGFAFVELVDPESEDRAIDAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 215 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 274
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 275 EAISALDGQNLEGRAIRVN-VAEERPPR 301
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 103 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 162
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 163 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 199
>gi|223995723|ref|XP_002287535.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
gi|220976651|gb|EED94978.1| hypothetical protein THAPSDRAFT_261569 [Thalassiosira pseudonana
CCMP1335]
Length = 253
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 49/78 (62%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
+ A +F+ +P D S ++ +F+Q+G++++ ++ + TG+S+GF F+ Y+ RS +
Sbjct: 65 EGANLFIFHIPNDFSNQEMYALFAQFGKVLSARIMVESDTGRSRGFGFVSYDSARSAADA 124
Query: 92 VDNLNGVKVLSRTIRVDH 109
+ +LNG V + ++V H
Sbjct: 125 ISHLNGYSVKGKRLKVQH 142
>gi|328774055|gb|EGF84092.1| hypothetical protein BATDEDRAFT_84811 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 47/72 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G L + + E + F+ +GE++ N+ RD+ +G+++GF F+ ++D + + +++ L
Sbjct: 37 LFIGNLAWSVDEQTLANAFAVHGELIECNIARDRESGRARGFAFVTFQDDDAALKAIEAL 96
Query: 96 NGVKVLSRTIRV 107
NG ++ R IRV
Sbjct: 97 NGAEIADRAIRV 108
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G L +D + + IF++YG I ++L D+ TG KGF ++ + Q ++D L
Sbjct: 339 LFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDAL 398
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDN 119
NG + R IR+D+ P +DN
Sbjct: 399 NGQDIAGRNIRIDYA---APREDN 419
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L +++ E + F +GEIV ++ D+ TG+ KGF ++ + + +
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 96 NGVKVLSRTIRVDHVNDYKPP-------KDNKYTDEETKKLRTI 132
+ ++ R + VD + P + NKY D+ + T+
Sbjct: 296 HQYELDGRPLNVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTL 339
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +FVGGL +D E ++ +F +YG+I + +V+D+ T +S+GF F+ +E+ +
Sbjct: 5 DEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDA 64
Query: 92 VDNLNGVKVLSRTIRVDHV 110
++ +NG V R IRVD
Sbjct: 65 MEAMNGKSVDGRQIRVDQA 83
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 225 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 284
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 285 EAISALDGQNLEGRAIRVN-VAEERPPR 311
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 14 SEQELSSG--SKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
SE ++S G S+ + + + A +FVG L YD++ + +F Q G + ++ ++ T
Sbjct: 113 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRET 172
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+S+GF F+ +V+ N + R + V+
Sbjct: 173 DQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 209
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 14 SEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGK 73
S EL+ G + + Y A ++VG L ++L++ D+ +F +G+I ++L RD+ITGK
Sbjct: 407 SAYELNRGPGPNDPNSY---ARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGK 463
Query: 74 SKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
SKG+ F+ +++ +++ +NG ++ R +RV+
Sbjct: 464 SKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVE 498
>gi|389746164|gb|EIM87344.1| hypothetical protein STEHIDRAFT_78229, partial [Stereum hirsutum
FP-91666 SS1]
Length = 244
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY++ E +I +F G+++ LV D+ TGK KG+ F + D + +V NL
Sbjct: 5 VFVGNVPYNMGEEQLIDVFKSVGQVIGFRLVYDRDTGKPKGYGFCEFGDHETAQSAVRNL 64
Query: 96 NGVKVLSRTIRVD 108
N V V R +R+D
Sbjct: 65 NNVDVGGRPLRID 77
>gi|149276657|ref|ZP_01882800.1| RNA binding protein [Pedobacter sp. BAL39]
gi|149232326|gb|EDM37702.1| RNA binding protein [Pedobacter sp. BAL39]
Length = 107
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGL + SE D++ S +G++V + +VRDK+T KSKG+ F+ +Q +V L
Sbjct: 4 IFVGGLSSETSEMDLVMFISLHGQVVTIKIVRDKVTRKSKGYAFLEMANQEEADKAVAAL 63
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPG 137
NG + V V PPK Y KK+ APG
Sbjct: 64 NGATFKGNELTV-RVAAETPPKAPVY-----KKVGPPSAAPG 99
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 56/91 (61%)
Query: 19 SSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFC 78
+ G +++ + A +F+ LP+DL++ D+ F+ +G +++ + DK+TG+SKGF
Sbjct: 389 AGGVRSTTQLEGPPGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGESKGFG 448
Query: 79 FICYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
F+ Y+ + ++ ++NG ++ S+ ++V H
Sbjct: 449 FVSYDAAEAADNAIASMNGFQIGSKRLKVQH 479
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 26 WHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQ 85
+D YK+ +F+G +P ++E +++ I +GE+V+L ++RDK+TG +G F +
Sbjct: 68 MNDPYKNPMKLFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASP 127
Query: 86 RSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCAPGTE------ 139
+V+ L+ L +I V +P + +E K IG P T
Sbjct: 128 EDAERAVEELHNKVTLPDSINPLQV---RPAEGQAGAAQEHKLF--IGMIPKTATEQAIY 182
Query: 140 --FGSILPV 146
FG P+
Sbjct: 183 DIFGEFGPI 191
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+G +P +E + IF ++G I + ++R + TG+SKG F+ ++++ S V S++ L
Sbjct: 167 LFIGMIPKTATEQAIYDIFGEFGPIDEVFILRHQPTGQSKGCAFLKFKERESAVASIEQL 226
Query: 96 NG 97
NG
Sbjct: 227 NG 228
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLP D +E D + F QYGEIV+ ++RDK T + +GF FI Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 96 ---NGVKV-LSRTIRVDHVN--DYK 114
NG +V + RTI D V D+K
Sbjct: 85 HEFNGKQVEIKRTIPKDSVQSKDFK 109
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICY 82
IFVGGLP L+E D F +YG +V+ ++RD T +S+GF FI +
Sbjct: 113 IFVGGLPQALTEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVF 159
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y ++E ++ IF++YGEI +NL+ DK TG+SKGF F+ Q ++ L
Sbjct: 3 IYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKEL 62
Query: 96 NGVKVLSRTIRVDHV 110
NG + +I+V+
Sbjct: 63 NGKTIKGMSIKVNQA 77
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D YK +F+ L YD++E D+ F YG I + LVRD+ GKS+G+ FI YE +R
Sbjct: 123 DAYKT---LFLARLSYDVTEKDLHREFDMYGPIETIRLVRDR-NGKSRGYAFIAYERERD 178
Query: 88 TVLSVDNLNGVKVLSRTIRVD-----HVNDYKP 115
+ + +G+K+ R + VD V D+KP
Sbjct: 179 MKAAYKDADGIKIHGRRVMVDVERGRTVKDWKP 211
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GGLPY L+E + I S YG + NLV+D TG SKG+ F Y+D ++ L
Sbjct: 341 VFIGGLPYHLTEDQIKEILSSYGPLNAFNLVKDPNTGLSKGYAFFQYKDPSIVEAAIKGL 400
Query: 96 NGVKVLSRTIRV 107
NG+ + +T+ V
Sbjct: 401 NGMTMGDKTLTV 412
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + D+I +F+ +GE+ N +L ++ TG+ +GF F+ D+ + +++ L
Sbjct: 3 IFVGNLPFRAEQEDIIELFASFGEVANCSLPLERDTGRKRGFAFVEMADEATEERAIEGL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGTELMGRPLRIN 75
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKGF F+ + D +++ L
Sbjct: 277 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 336
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 337 NGFELAGRPMRVGHVTE 353
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKGF F+ + D +++ L
Sbjct: 275 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 334
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 335 NGFELAGRPMRVGHVTE 351
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
+A +++GGL YDL+E V F +G+I ++L D+ TG KGF ++ + D ++
Sbjct: 310 AATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAAL 369
Query: 93 DNLNGVKVLSRTIRVDH 109
+ +NG ++ R IRVD+
Sbjct: 370 EAMNGKELSGRRIRVDY 386
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 11 KKLSEQELSSGSKTSWHD-QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDK 69
K+ ++QE + +K S D + + +A ++VGGL +++ + F GE+V ++ D
Sbjct: 188 KRKADQEAQAPAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDH 247
Query: 70 ITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVND 112
KSKGF F+ ++ +V + G ++ R IR D +
Sbjct: 248 QNQKSKGFGFVRFKTAEEAAKAV-AMTGHEIDGRAIRCDFAAE 289
>gi|242067641|ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
gi|241934940|gb|EES08085.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
Length = 545
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+ GL Y +++ D+ +FS+YGEI + ++ DK TG+SKG+ F+ D + +++ L
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 96 NGVKVLSRTIRV 107
NG + RTI V
Sbjct: 63 NGAEYDGRTISV 74
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 293 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 352
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 353 NGFELAGRPMRVGHVTE 369
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 50/76 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L + G + F Q+G++V+ +++D+ TG+S+GF FI ++++ + +++ L
Sbjct: 34 LFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIEAL 93
Query: 96 NGVKVLSRTIRVDHVN 111
NG ++ R IRV++ N
Sbjct: 94 NGQELDGREIRVNYAN 109
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L + ++GDV +FS +G+++++NL+ D+ TG+++GF F+ ED + ++ L
Sbjct: 5 IYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEMEDDDAAN-AISAL 63
Query: 96 NGVKVLSRTIRVDHVNDYKPP 116
+G +V R++RV+ KP
Sbjct: 64 DGKEVDGRSLRVNKAEPKKPA 84
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 268 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 327
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 328 NGFELAGRPMRVGHVTE 344
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+ GL Y +++ D+ +F++YGEI + ++ DK TG+SKG+ F+ ED + +++ L
Sbjct: 3 IFIAGLSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEEL 62
Query: 96 NGVKVLSRTIRV 107
NG + RTI V
Sbjct: 63 NGAEYDGRTISV 74
>gi|198424504|ref|XP_002131946.1| PREDICTED: similar to poly-U binding splicing factor 60KDa [Ciona
intestinalis]
Length = 491
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG + YDL E + FS +G ++N+ D ITGK KGF FI YE + LS+D +
Sbjct: 100 VYVGSIYYDLKEEIIRNAFSPFGPFKSINMSFDPITGKHKGFAFIEYETPEAAQLSLDQM 159
Query: 96 NGVKVLSRTIRV 107
GV + R+I+V
Sbjct: 160 GGVMLGGRSIKV 171
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D+ K I++ + DL+ D+ +FS +G I++ LV D +TGK KG+ FI Y+ ++
Sbjct: 189 DESKMQKRIYISSVHTDLNTEDLKSVFSAFGNILSCALVPDVLTGKHKGYGFIEYDTLQA 248
Query: 88 TVLSVDNLNGVKVLSRTIRV 107
+V ++N + + +RV
Sbjct: 249 ANDAVASMNLFDLGGQYLRV 268
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LP+++ + DV+ +F +YG+I ++L D+ TGK +GF F+ E ++ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
+G + + R ++V+ + +P
Sbjct: 63 DGAQWMGRELKVNQAREREP 82
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 12 KLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT 71
KLSE + + D Y+ IFVG LPYD+SE ++ F+++GEI + +VRDKI
Sbjct: 88 KLSEWDPQNDPNMKDTDPYRT---IFVGRLPYDISEVELQRKFNEFGEIEKVRVVRDKIN 144
Query: 72 GKSKGFCFICYEDQRSTVLSVDNLN---GVKVLSRTIRVD 108
+SKG+ FI + D +S+ + G+++ RT VD
Sbjct: 145 NQSKGYAFIVFTDPQSSKSACKEYGLHRGIEIKGRTCIVD 184
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|33860573|ref|NP_892134.1| RNA recognition motif-containing protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633515|emb|CAE18472.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 221
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ D++ +F+ YGE++N +L ++ TG+ +GF F+ D+ ++D L
Sbjct: 24 IFVGNLPFRAEREDILELFTPYGEVMNCSLPLERDTGRKRGFAFVEMADEALETSAIDGL 83
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 84 QGTELMGRPLRIN 96
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|412990165|emb|CCO19483.1| predicted protein [Bathycoccus prasinos]
Length = 495
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS-TVLSVDN 94
+FVGGLPY L+E + + +G I +LVRD+ TG SKG+ F+ Y D + T +++
Sbjct: 273 VFVGGLPYFLTEAQIRELLEAFGPITRFDLVRDRDTGGSKGYGFVVYRDGPAITDIAIQG 332
Query: 95 LNGVKVLSRTIRVDHVN 111
L+G+++ + + V N
Sbjct: 333 LHGMQMGDKQLTVRRAN 349
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 21 GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFI 80
SK+S HD + + FVG LPYD+ E + FSQ G++ + ++RD+ TG KGF ++
Sbjct: 263 ASKSSSHDNKRSA---FVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYV 319
Query: 81 CYEDQRSTVLSVDNLNGVKVLSRTIRV----------------------DHVNDYKPPKD 118
+E + L++ LN ++ R IRV D +N KP K
Sbjct: 320 LFESADAVQLAL-KLNNSQLSGRRIRVKRSVTAEAAQKSTNKTSFKQKLDTLNQTKPIKA 378
Query: 119 NKYTDE 124
N + E
Sbjct: 379 NSFVGE 384
>gi|367015616|ref|XP_003682307.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
gi|359749969|emb|CCE93096.1| hypothetical protein TDEL_0F02850 [Torulaspora delbrueckii]
Length = 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G + NL ++ D TGKSKG+ F+ Y+D S+ +V NL
Sbjct: 18 VYLGSIPYDQTEEQILDLCSNVGPVTNLKMMFDPQTGKSKGYAFVEYKDLESSASAVRNL 77
Query: 96 NGVKVLSRTIRVDHVND 112
NG + SR ++ + ++
Sbjct: 78 NGYQFGSRLLKCGYASN 94
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 51/74 (68%)
Query: 37 FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLN 96
FVGGL + ++ D+ FSQ+GE+++ ++ D+ TG+S+GF F+ ++D++S +++ +N
Sbjct: 10 FVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMN 69
Query: 97 GVKVLSRTIRVDHV 110
G ++ R+I V+
Sbjct: 70 GKELDGRSITVNEA 83
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLP L++ V+ + + +GE+ NLV+D TG +KGF F Y D T L+ L
Sbjct: 296 VFVGGLPVYLTDNQVMELLTSFGELRAFNLVKDTATGANKGFAFCEYADPSVTDLACQGL 355
Query: 96 NGVKV 100
NG+++
Sbjct: 356 NGMEL 360
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 8 KNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVR 67
KN+K L + + S +K++ D YK +FV + Y SE + FSQYG I + LV
Sbjct: 76 KNLKSLKQWDPHSNTKST-GDPYKT---LFVSRISYKTSESKLKNEFSQYGPIKKIRLVT 131
Query: 68 DKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
D++TGK KG+ FI +E +R ++ +G K+ R + VD
Sbjct: 132 DQVTGKPKGYAFIEFEKERDMKIAYKQADGQKIDDRRVLVD 172
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 26/126 (20%)
Query: 21 GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFI 80
SK+S HD + + FVG LPYD+ E + FSQ G++ + ++RD+ TG KGF ++
Sbjct: 263 ASKSSSHDNKRSA---FVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYV 319
Query: 81 CYEDQRSTVLSVDNLNGVKVLSRTIRV----------------------DHVNDYKPPKD 118
+E + L++ LN ++ R IRV D +N KP K
Sbjct: 320 LFESADAVQLAL-KLNNSQLSGRRIRVKRSVTAEAVQKSTNKTSFKQKLDTLNQTKPIKG 378
Query: 119 NKYTDE 124
N + E
Sbjct: 379 NSFVGE 384
>gi|384498968|gb|EIE89459.1| hypothetical protein RO3G_14170 [Rhizopus delemar RA 99-880]
Length = 344
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S +FVG +P++LSE +I +F + G + + L+ D+ TG+ KG+ F + D +
Sbjct: 6 RGSRVVFVGNIPFELSEEQLIEVFKEVGPVASFRLLFDRETGRPKGYGFCEFYDAETAAS 65
Query: 91 SVDNLNGVKVLSRTIRVDH 109
+V NLN ++ R +RVD+
Sbjct: 66 AVRNLNDYEIGGRQLRVDY 84
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LP+++ + DV+ +F +YG+I ++L D+ TGK +GF F+ E ++ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
+G + + R ++V+ + +P
Sbjct: 63 DGAQWMGRELKVNQAREREP 82
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D YK +F+ L YD++E D+ F YG I + LVRD+ GKS+G+ FI YE +R
Sbjct: 127 DAYKT---LFLARLAYDVTEKDLHREFDMYGPIETIRLVRDR-EGKSRGYAFIAYERERD 182
Query: 88 TVLSVDNLNGVKVLSRTIRVD-----HVNDYKP 115
+ + G+K+ R + VD V D+KP
Sbjct: 183 MRAAWKDAEGIKINGRRVMVDVERGRTVKDWKP 215
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 326 NGFELAGRPMRVGHVTE 342
>gi|58271580|ref|XP_572946.1| polyadenylation factor 64 kDa subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229205|gb|AAW45639.1| polyadenylation factor 64 kDa subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 455
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FV +PYD+SE + +FS+ G + N+ + D TG+SKG+ F+ + D+ + + +V NL
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
V R +RV+ D
Sbjct: 69 QDAPVNGRNLRVELSTD 85
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD +E ++ I + G +V+ LV DK TGK KG+ F Y+D+ + + + NL
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 96 NGVKVLSRTIRVD 108
G ++ R +RVD
Sbjct: 73 QGYEINGRQLRVD 85
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 326 NGFELAGRPMRVGHVTE 342
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 275 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 334
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 335 NGFELAGRPMRVGHVTE 351
>gi|393910685|gb|EJD75995.1| hypothetical protein LOAG_16958 [Loa loa]
Length = 159
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 34 AWI-FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI FV + + E DV FS+YGEI N+NL D+ TG KG+ + YE Q+ + ++
Sbjct: 70 GWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLKGYALVEYETQKEALAAI 129
Query: 93 DNLNGVKVLSRTIRV 107
++LNG ++L +TI V
Sbjct: 130 ESLNGAELLGQTINV 144
>gi|425434851|ref|ZP_18815315.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675575|emb|CCH95322.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG L Y++S+ ++ +F +YGE+ +++ DK TG+ +GF F+ E++ +++ L
Sbjct: 3 IFVGNLSYEISQEALVDVFREYGEVKRVHIPVDKETGRKRGFAFVEMENKAQETTAIEAL 62
Query: 96 NGVKVLSRTIRVDHVND 112
+G + + R+I+V+ D
Sbjct: 63 DGAEWMGRSIKVNEARD 79
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L Y+++E + IF +G + N+ L+ D TG+SKG+ F+ Y + ++++L
Sbjct: 240 LYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHL 299
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R ++V HV +
Sbjct: 300 NGFEIAGRPMKVGHVTE 316
>gi|54310514|ref|YP_131534.1| RNA-binding protein [Photobacterium profundum SS9]
gi|46914957|emb|CAG21732.1| hypothetical RNA-binding protein [Photobacterium profundum SS9]
Length = 152
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D + S I+VG LPY +E DV +FS++GE+ + L++DK TGK +GF F+ +
Sbjct: 59 DPSQSSKTIYVGNLPYRANESDVKNLFSEHGEVFAVRLMKDKRTGKRRGFGFVVMNSSDA 118
Query: 88 TVLSVDNLNGVKVLSRTIRVDHVNDYK 114
++ NLN + RT+++ ND K
Sbjct: 119 DT-AIQNLNNKEYGQRTLKIREANDPK 144
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|50419577|ref|XP_458315.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
gi|49653981|emb|CAG86393.1| DEHA2C14542p [Debaryomyces hansenii CBS767]
Length = 235
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +P+D +E V+ I G +++L L+ D +TGKS+G+ FI Y D + +V NL
Sbjct: 7 VYIGNIPFDHTEEQVLEIAKSVGPVIDLKLLFDPMTGKSRGYAFIKYGDHETAASAVRNL 66
Query: 96 NGVKVLSRTIRVDHVND 112
N + + +R I+ ND
Sbjct: 67 NNMAIGNRNIKCSFSND 83
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKGF F+ + D +++ L
Sbjct: 259 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 318
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 319 NGFELAGRPMRVGHVTE 335
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG P+ +E ++ FSQ G + N+ +V D+ TG+ +GF F+ Y D++S +V+ L
Sbjct: 7 VYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNEL 66
Query: 96 NGVKVLSRTIRVDHVND 112
NG R +RV+ N+
Sbjct: 67 NGADFNGRQLRVNLANN 83
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|443898802|dbj|GAC76136.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Pseudozyma antarctica T-34]
Length = 401
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 38 VGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNG 97
VG +PYD+SE + +F + G++V LV D+ TGK KG+ F +ED + +V NLN
Sbjct: 14 VGNIPYDMSEEQLTDVFREVGKVVGFRLVNDRDTGKFKGYGFCEFEDPETAASAVRNLNE 73
Query: 98 VKVLSRTIRV 107
V+V R +R+
Sbjct: 74 VEVGGRPLRI 83
>gi|443328785|ref|ZP_21057378.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442791521|gb|ELS01015.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 92
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G L Y+ SE D+I +F++YG + + L+ D+ TG+ +GF F+ E ++ L
Sbjct: 3 IFIGNLSYEASEQDLIVVFAEYGSVQEVKLITDRDTGRMRGFGFVRLETLTQEEAAIAAL 62
Query: 96 NGVKVLSRTIRVDHVND 112
+G + + RT++V+ N+
Sbjct: 63 DGAEWMGRTLKVNKANE 79
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM 5692]
Length = 87
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LP+ +E +V +F+QYGE+ ++ L+ D+ TG+ +GF F+ ED + +++ L
Sbjct: 4 IYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTGRPRGFGFVEMEDGGADK-AIEAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDN 119
+G R++RV+ + KP + N
Sbjct: 63 DGTTFGGRSLRVNEARERKPRQSN 86
>gi|428210908|ref|YP_007084052.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|427999289|gb|AFY80132.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 109
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD++E D+ +F++YG + +NL D+ TG+ +GF F+ + +++ L
Sbjct: 3 IYVGNLSYDVTEQDLNSVFAEYGTVKRVNLPTDRETGRPRGFGFVEMDTDAEETAAIEAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
+G + + R ++ VN KP +DNK
Sbjct: 63 DGAEWMGRDLK---VNKAKPREDNK 84
>gi|308477111|ref|XP_003100770.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
gi|308264582|gb|EFP08535.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
Length = 393
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 36 IFVGGLPYDLSEGDVICIFS-QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDN 94
IFVG LP+D++E +I F+ Q G++ + +VRDK TG KGF F+ ++ S L++ +
Sbjct: 247 IFVGNLPFDITEDALITFFTEQIGQVEAVRIVRDKATGVGKGFAFVNFKQDSSVSLAL-S 305
Query: 95 LNGVKVLSRTIRVDHV 110
+ +K+ R +R+ V
Sbjct: 306 METIKMEKRDLRITKV 321
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 19/111 (17%)
Query: 22 SKTSWHDQYKDSA-WIFVGGLPYDLSEGDVICIFSQYGEIV-----NLNLVRDKITGKSK 75
SK + DSA +F+G +P ++E V IFS +G I NL V +K+T +
Sbjct: 129 SKANARSSAADSAKTVFIGNMPLTMNEKSVRKIFSDFGAISSVRMRNLIPVNEKLTKRVT 188
Query: 76 GFC------------FICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYK 114
++ Y D+ S S+ NG K+ +RVD V K
Sbjct: 189 HLSGKLNDKQNSLIFYVKYNDEESVEKSL-KYNGTKLEDHIVRVDKVGSKK 238
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 311
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 312 NGFELAGRPMRVGHVTE 328
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLP L+E V+ + +GE+ NLVR+ G SKG+ F Y D+ T +++ L
Sbjct: 142 IFVGGLPTYLNEEQVMELLKSFGELKAFNLVRENNNGPSKGYAFFEYVDEEVTEVAIQGL 201
Query: 96 NGVKVLSRTIRV 107
NG+++ R + V
Sbjct: 202 NGMELGDRVLAV 213
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S+ +FVGGL Y EG + FS YGEI++ ++ D+ TG+S+GF FI Y + ++
Sbjct: 30 SSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAI 89
Query: 93 DNLNGVKVLSRTIRV 107
L+G + R +RV
Sbjct: 90 MALDGKDLHGRNLRV 104
>gi|302831616|ref|XP_002947373.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
gi|300267237|gb|EFJ51421.1| hypothetical protein VOLCADRAFT_120471 [Volvox carteri f.
nagariensis]
Length = 582
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 24 TSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
T +H++ I+VGGL + ++ D+ +FS+ G+++N+ LV D T +SKG+ F+ +
Sbjct: 72 TGYHNK------IYVGGLEFSATKEDIAEVFSRAGKVLNVQLVMDHETQRSKGYAFVTFA 125
Query: 84 DQRSTVLSVDNLNGVKVLSRTIRV------DHVNDYKPPKD 118
D + ++ +NGV V + ++V D D PP+D
Sbjct: 126 DDDAYEYAIKRMNGVTVRGKEVKVNKALNPDEKADRGPPRD 166
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LPY +SE D+ FS++GE+ + N++ DK +G+SKGF F+ D + +++++
Sbjct: 3 IYVGNLPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESM 62
Query: 96 NGVKVLSRTIRVDHVNDYKP-----PKDNKY 121
+ R+I VN+ KP P+ ++Y
Sbjct: 63 HNKDFKGRSI---MVNEAKPREERAPRRDRY 90
>gi|134114518|ref|XP_774089.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256721|gb|EAL19442.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 455
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FV +PYD+SE + +FS+ G + N+ + D TG+SKG+ F+ + D+ + + +V NL
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSAVRNL 68
Query: 96 NGVKVLSRTIRVDHVND 112
V R +RV+ D
Sbjct: 69 QDAPVNGRNLRVELSTD 85
>gi|378727758|gb|EHY54217.1| 26S proteasome regulatory subunit N7 [Exophiala dermatitidis
NIH/UT8656]
Length = 206
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 34 AWIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI V + + +E D+ +F +YG+I NL+L D+ TG KG+ I Y Q ++
Sbjct: 67 GWIVVATNIHEEATEEDITDLFGEYGDIKNLHLNLDRRTGYVKGYVLIEYPTQVEAASAI 126
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKD 118
LNG K+L +TI VD+ PPK+
Sbjct: 127 KALNGAKLLDQTISVDYAFVRPPPKE 152
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y+L E D+ IF+ +G + +++ D TG+ KGFCFI Y D +S ++ +
Sbjct: 289 IYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAM 348
Query: 96 NGVKVLSRTIRV 107
NG ++ R I+V
Sbjct: 349 NGFELAGRAIKV 360
Score = 39.7 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKIT-GKSKGFCFICYEDQRSTVLSVDN 94
I+VG + ++ + +F +G +V +V+D G KGF FI Y + +D
Sbjct: 428 IYVGNVEPHITTEMIKTVFEPFGMVVGAEMVQDPSNPGNHKGFGFIQYAQESVARTVIDT 487
Query: 95 LNGVKVLSRTIRVDHVNDYKPP 116
++ ++ RT+RV D P
Sbjct: 488 MSSFELAGRTLRVAWAQDQSKP 509
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
L++ T+ +D IFVGGLPY +E V + +G + +LV+DK TG SKG+
Sbjct: 123 LAAVGLTAGSGGLEDPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDKETGNSKGY 182
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVN 111
F Y+D T ++ LNG+K+ + + V N
Sbjct: 183 AFCDYQDLTVTDIACAALNGIKMGDKILTVRRAN 216
>gi|333030996|ref|ZP_08459057.1| RNP-1 like RNA-binding protein [Bacteroides coprosuis DSM 18011]
gi|332741593|gb|EGJ72075.1| RNP-1 like RNA-binding protein [Bacteroides coprosuis DSM 18011]
Length = 109
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+GGL Y +++ D++ +F +YGEI + ++ D+ T KSKGF F+ ED + ++ L
Sbjct: 3 IFIGGLSYGITDADLMDLFQEYGEIKSAKVIMDRETNKSKGFGFVEMEDDSAAKNAISEL 62
Query: 96 NGVKVLSRTIRV 107
NG + RTI V
Sbjct: 63 NGAEYDGRTISV 74
>gi|402223467|gb|EJU03531.1| hypothetical protein DACRYDRAFT_77158 [Dacryopinax sp. DJM-731 SS1]
Length = 392
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLP L+E V+ + +GE+ NLV+D TG SKGF F Y D T ++ L
Sbjct: 170 IFVGGLPTYLNEAQVMELLQTFGELRAFNLVKDGSTGVSKGFAFFEYMDPGVTDVACQGL 229
Query: 96 NGVKVLSRTIRV 107
NG+++ R + V
Sbjct: 230 NGMELGDRYLVV 241
>gi|365986010|ref|XP_003669837.1| hypothetical protein NDAI_0D02800 [Naumovozyma dairenensis CBS 421]
gi|343768606|emb|CCD24594.1| hypothetical protein NDAI_0D02800 [Naumovozyma dairenensis CBS 421]
Length = 315
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 21 GSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFI 80
GS S H + S +++G +PYD +E ++ + + G +VNL ++ D+ TG+SKG+ FI
Sbjct: 35 GSSGSQHYN-QPSRIVYLGSIPYDQTEEQILDLCNNVGPVVNLKMMFDQQTGRSKGYAFI 93
Query: 81 CYEDQRSTVLSVDNLNGVKVLSRTIRVDH 109
++D ++ ++ NLNG ++ SR +R +
Sbjct: 94 EFKDLETSASAIRNLNGYQLGSRFLRCGY 122
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 291 NGFELAGRPMRVGHVTE 307
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 42/58 (72%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRST 88
+DS +F+GGL +D +E ++ FS+YGEI++ +++D TG+S+GF F+ ++D R+
Sbjct: 160 RDSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAV 217
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
IFVGG+ ++E D FSQ+G I++ L+ DK TG+S+GF FI Y+
Sbjct: 249 IFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYD 296
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGL Y +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 378 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 437
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 438 NGIKMGDKTLTVRRAN 453
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG LP+++ + DV+ +F +YG+I ++L D+ TGK +GF F+ E ++ L
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKP 115
+G + + R ++V+ + +P
Sbjct: 63 DGAQWMGRELKVNQAREKEP 82
>gi|90414705|ref|ZP_01222676.1| hypothetical RNA-binding protein [Photobacterium profundum 3TCK]
gi|90324247|gb|EAS40822.1| hypothetical RNA-binding protein [Photobacterium profundum 3TCK]
Length = 152
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D + S I+VG LPY +E DV +FS++GE+ + L++DK TGK +GF F+ +
Sbjct: 59 DSSQSSKTIYVGNLPYRANESDVKNLFSEHGEVFAVRLMKDKRTGKRRGFGFVVMNSSDA 118
Query: 88 TVLSVDNLNGVKVLSRTIRVDHVNDYK 114
++ NLN + RT+++ ND K
Sbjct: 119 DT-AIQNLNNKEYGQRTLKIREANDPK 144
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 291 NGFELAGRPMRVGHVTE 307
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 49/77 (63%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
A +F+ LP DL++ D+ F+ +G +++ + D+ TG+SKGF F+ Y+ + L++
Sbjct: 278 GANLFIYHLPIDLTDADLATAFNPFGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAI 337
Query: 93 DNLNGVKVLSRTIRVDH 109
+ +NG ++ ++ ++V H
Sbjct: 338 EQMNGFQIGNKRLKVQH 354
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P L+E D+ +F YG I+++ ++RD+ TG +G F+ YE + V+ +
Sbjct: 4 LFVGQVPKTLAEEDLALLFEPYGRILDMTVIRDRRTGTHRGCAFVTYESGEDAMRVVNEM 63
Query: 96 NG 97
+G
Sbjct: 64 HG 65
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 28 DQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRS 87
D+ + A +FVG LP + E V +F+ YG+I + +++ + G F+ + ++
Sbjct: 93 DEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGIYIIKKRNNEAKNGCAFVKFRERDM 152
Query: 88 TVLSVDNLNG---VKVLSRTIRV 107
++D L+G ++ + + IRV
Sbjct: 153 AQAAIDALDGEVHLEGVDKPIRV 175
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 253 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 312
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 313 NGFELAGRPMRVGHVTE 329
>gi|403370032|gb|EJY84876.1| RNA-binding protein [Oxytricha trifallax]
Length = 722
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++ G+P ++E D++ F +YG+I+ + ++RD IT SKGF ++ YE +++ L
Sbjct: 325 VYIAGIPRWVNESDLLKTFEKYGKILEVKVIRDHITKNSKGFAYVLYERSSDAQRAIEGL 384
Query: 96 NGVKVLS 102
+GV+V +
Sbjct: 385 DGVRVYN 391
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 16 QELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSK 75
+EL + + +++ + +FVG LP+ + + +F Q G + + ++ DK+TG+S+
Sbjct: 65 EELEAEGQPGGEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSR 124
Query: 76 GFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDYKPPKD 118
GF F+ + +V+ NG + R++RV+ + PP+D
Sbjct: 125 GFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVN--SGPPPPRD 165
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VG L + + + +FS+ GE++ +V D+ +G+S+GF F+ Y +
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
+ NL+G + R IRV V + KPP+
Sbjct: 235 ISNLDGSDLDGRQIRVT-VAESKPPR 259
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 291 NGFELAGRPMRVGHVTE 307
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGL Y +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 371 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 430
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 431 NGIKMGDKTLTVRRAN 446
>gi|196002047|ref|XP_002110891.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586842|gb|EDV26895.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 170
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 34 AWI-FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI FV + + E DV F++YG++ NL+L D+ TG KG+ + +E ++ ++
Sbjct: 73 GWIVFVANIHEEAQEDDVYEKFAEYGDVKNLHLNLDRRTGFIKGYALVEFETKKEAQAAI 132
Query: 93 DNLNGVKVLSRTIRVD 108
DNLNG +L +TI+VD
Sbjct: 133 DNLNGTNLLEQTIKVD 148
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 4 LTNVKNIKKLSEQELSSGSKTSWHDQYKDSA--WIFVGGLPYDLSEGDVICIFSQYGEIV 61
L ++ + + S+ E + ++ S + Q +S ++VG L ++++E + IF +G+I
Sbjct: 224 LLSIPIMVQASQAEKNRAAQNSQNLQKGNSGPMRLYVGSLHFNITEEMLRGIFEPFGKID 283
Query: 62 NLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVND 112
N+ L++D TG+SKG+ FI + D +++ LNG ++ R ++V HV +
Sbjct: 284 NIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMKVGHVTE 334
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+D+ +F L + D+ FS G + ++ L+ D+ + +SKG ++ ++D+ S L
Sbjct: 156 RDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPL 215
Query: 91 SVDNLNGVKVLSRTIRV 107
++ L+G K+LS I V
Sbjct: 216 AL-GLSGQKLLSIPIMV 231
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RDK TG+S+GF F+ Y++ +
Sbjct: 3 DEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
++ +NG + R IRVD K + N+
Sbjct: 63 LEGMNGKTLDGRAIRVDEAG--KGGRSNR 89
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKBRVCIVD 184
>gi|313243391|emb|CBY42167.1| unnamed protein product [Oikopleura dioica]
Length = 199
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K + +FVG +PY+ +E + IF++ G +++ LV D+ TGK KG+ F Y+D + +
Sbjct: 22 KAARSVFVGNIPYEATEEQIRDIFNEVGVVLSFRLVYDRETGKPKGYGFCEYKDTDTAMS 81
Query: 91 SVDNLNGVKVLSRTIRVDHV 110
++ NLN ++ R +RVDH
Sbjct: 82 AMRNLNTRELHGRNLRVDHA 101
>gi|440804013|gb|ELR24896.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 468
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 26/149 (17%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
+ ++VG LPY ++ ++ F+Q+G ++ ++ K TG+SKG+ FI + + +
Sbjct: 310 AGAVYVGHLPYGFNKEQMMGFFAQFGRVLKISHPLSKKTGRSKGYAFILFRHKEVAQVVA 369
Query: 93 DNLNGVKVLSRTIR---------VDHV--NDYKPPKDNKYTDEETKKLRTIGCAPGTEFG 141
D +NG + R +R +HV N P + Y + E +K + A
Sbjct: 370 DTMNGYLIFGRILRCKYIPAAQIAEHVFKNAKMPYPEFNYQELEQQKRSKLRSAE----- 424
Query: 142 SILPVKTEDIKQEKDSKPTESKDKKRKHK 170
K EK +K +K+KKR+ K
Sbjct: 425 ----------KHEKLTKALVAKEKKRRQK 443
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGL Y +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 378 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 437
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 438 NGIKMGDKTLTVRRAN 453
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 310 NGFELAGRPMRVGHVTE 326
>gi|154339235|ref|XP_001562309.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062892|emb|CAM39339.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 163
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 24 TSWHDQYKDSAWIFV--------------GGLPYDLSEGDVICIFSQYGEIVNLNLVRDK 69
T +H ++ WI + G P LSEGD++ +FSQ+GEIV++ VR +
Sbjct: 14 TEYHALLGNAQWIVIRRLLRPPLTDVSDDGSTP-QLSEGDIVTVFSQFGEIVDVRFVRHR 72
Query: 70 ITGKSKGFCFICYEDQRSTVLSVDNLN 96
TG+ G F+ ++D RS +L+ D LN
Sbjct: 73 KTGRFLGTAFVKFKDYRSGILAADELN 99
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 13/84 (15%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+DS +FVGGL +D +E + FS+YG +++ ++RD TG+S+GF F+ +ED +S
Sbjct: 169 RDSGKMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKS--- 225
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYK 114
+ I+VDH+ D K
Sbjct: 226 ----------VDEVIKVDHILDGK 239
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYE 83
IFVGG+ ++E + F+QYG I++ L+ DK TG+S+GF FI Y+
Sbjct: 258 IFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRSRGFGFITYD 305
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 291 NGFELAGRPMRVGHVTE 307
>gi|357446501|ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 593
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + + ++VRDK TG SKG+ F Y+D T ++ L
Sbjct: 371 IFVGGLPYYFTEVQMRELLQAFGPLRSFDIVRDKETGNSKGYGFCIYQDPAVTDIACAAL 430
Query: 96 NGVKVLSRTIRVDHVN---DYKPPKDNKYT 122
NG+K+ +T+ V KP +DN +
Sbjct: 431 NGLKMGDKTLTVRRATVSAHSKPEEDNIFA 460
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKGRVCIVD 184
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L YD++E D++ YG++ + +VRDKI+GK +G+ F+ +E +R +
Sbjct: 107 LFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRDKISGKPRGYAFVEFEHERDMRAAYRYA 166
Query: 96 NGVKVLSRTIRVD 108
+G+++ R I VD
Sbjct: 167 DGMRLNGRRIVVD 179
>gi|221484519|gb|EEE22813.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 802
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG LP SE D+ G + + ++RDK+T +SKGF F+C+ED+ S +V
Sbjct: 668 VFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARAVLAS 727
Query: 96 NGVKVL-SRTIRVDHVND 112
NGV L +T+RV D
Sbjct: 728 NGVVSLQGKTLRVTRALD 745
>gi|237839677|ref|XP_002369136.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966800|gb|EEB01996.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 802
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG LP SE D+ G + + ++RDK+T +SKGF F+C+ED+ S +V
Sbjct: 668 VFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARAVLAS 727
Query: 96 NGVKVL-SRTIRVDHVND 112
NGV L +T+RV D
Sbjct: 728 NGVVSLQGKTLRVTRALD 745
>gi|261196824|ref|XP_002624815.1| RNA-binding protein 8A [Ajellomyces dermatitidis SLH14081]
gi|239596060|gb|EEQ78641.1| RNA-binding protein 8A [Ajellomyces dermatitidis SLH14081]
gi|239609642|gb|EEQ86629.1| RNA-binding protein 8A [Ajellomyces dermatitidis ER-3]
gi|327355650|gb|EGE84507.1| RNA-binding protein 8A [Ajellomyces dermatitidis ATCC 18188]
Length = 161
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 34 AWIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y ++
Sbjct: 43 GWIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYTTLPEAKAAI 102
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDNK 120
+ LNG K+L ++I+VD PP NK
Sbjct: 103 EALNGAKLLDQSIQVDFAFVRPPPSHNK 130
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|347971166|ref|XP_003436702.1| AGAP013420-PA [Anopheles gambiae str. PEST]
gi|333466617|gb|EGK96316.1| AGAP013420-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 37 FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLN 96
++ LP+DL+ DV +FS++G+I+ + ++RDK++ KSKG F+ + + + + + N
Sbjct: 16 YISNLPFDLTNIDVQKLFSKHGKIIKVTILRDKVSRKSKGVAFVLFSNAQEALDCCNACN 75
Query: 97 GVKVLSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGC---------APGTEFGSILPVK 147
++ RT++ D + + K R C P G+ P +
Sbjct: 76 STEMFGRTLKASIAKDNGKSAQHAQRKQYPDKSRCYECGTEGHMSYSCPKNVLGNKTPPR 135
Query: 148 TEDIKQEKDSKPTES 162
+D KQ K +P E+
Sbjct: 136 KKDRKQAKRKQPNET 150
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKDRVCIVD 184
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 310 NGFELAGRPMRVGHVTE 326
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 18 LSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
+SSGS T S +FVGGL + ++ + FSQYGE+ + +++D+ TG+S+GF
Sbjct: 5 VSSGSYTQASSSSGMSQKLFVGGLAWATTDDSLFSAFSQYGEVTDCIVMKDRETGRSRGF 64
Query: 78 CFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVND 112
F+ D + +++ LN + R +RVD D
Sbjct: 65 GFVTMSDPAAAEQAIEALNNGDLDGRQVRVDKAAD 99
>gi|391329033|ref|XP_003738982.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Metaseiulus occidentalis]
Length = 263
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
K+ I+VG +P+ E ++ FSQ+GE+ + + R + TG S+GF F+ ++ +
Sbjct: 51 KERGVIYVGHIPHGFYEDELRKYFSQFGEVTRVRVSRSRKTGGSRGFAFVEFQHDAVAAI 110
Query: 91 SVDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTD 123
+ D +NG + R ++V+ V PK+ ++D
Sbjct: 111 AADTMNGYLMFDRLLKVNVV-----PKEKVHSD 138
>gi|313231304|emb|CBY08419.1| unnamed protein product [Oikopleura dioica]
Length = 160
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P+ E D+ IFS +G++V ++ D+ TG+S+G F + D+ S ++D+L
Sbjct: 83 VFVGNIPWTAQEEDLKDIFSAHGQVVKFRILVDRETGRSRGMGFCEFADESSCQAAIDSL 142
Query: 96 NGVKVLSRTIRVDHV 110
NG R +RVDH
Sbjct: 143 NGHDYNGRQLRVDHA 157
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y L+E ++ +FS+YGE+ + N++ DK +GKS+GF F+ ++ +++ L
Sbjct: 3 IYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
NG ++ R+++ VN+ +P +++
Sbjct: 63 NGSQLDGRSLK---VNEARPRSNDR 84
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG LPY ++ G++ FS+ G + N+ ++ DK+T +S+GF F+ ++
Sbjct: 120 LFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMF 179
Query: 96 NGVKVLSRTIRVDH 109
NG + RT RV++
Sbjct: 180 NGALLGGRTARVNY 193
>gi|221504716|gb|EEE30381.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 802
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG LP SE D+ G + + ++RDK+T +SKGF F+C+ED+ S +V
Sbjct: 668 VFVGNLPSRCSEEDLRRALESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSAARAVLAS 727
Query: 96 NGVKVL-SRTIRVDHVND 112
NGV L +T+RV D
Sbjct: 728 NGVVSLQGKTLRVTRALD 745
>gi|312074485|ref|XP_003139992.1| hypothetical protein LOAG_04407 [Loa loa]
Length = 567
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 17 ELSSGSKTSWHDQYKDSAWI-FVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSK 75
E ++G+ Q WI FV + + E DV FS+YGEI N+NL D+ TG K
Sbjct: 461 ESTAGANNPNAPQRSVEGWIVFVTNVHEEAHEDDVYERFSEYGEIKNMNLNIDRRTGFLK 520
Query: 76 GFCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
G+ + YE Q+ + ++++LNG ++L +TI V
Sbjct: 521 GYALVEYETQKEALAAIESLNGAELLGQTINV 552
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G I N+ L+ D TG+SKG+ FI + D +++ L
Sbjct: 233 LYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQL 292
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R ++V HV D
Sbjct: 293 NGFELAGRPMKVGHVTD 309
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 267 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 326
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +R+ HV +
Sbjct: 327 NGFELAGRPMRIGHVTE 343
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKDRVCIVD 184
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
YK + + VG + Y+ SE + I SQ G I++ +V D+ TGK KG+ F Y D +
Sbjct: 18 YKTTNFDQVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMAL 77
Query: 90 LSVDNLNGVKVLSRTIRVD 108
++ NLNG ++ RT+RVD
Sbjct: 78 SAIRNLNGTELNGRTLRVD 96
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G L +D+ E + F+ GE+VN+ D+ TG KGF + + + +T L+V
Sbjct: 127 IFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQFAESSATDLAVAK- 185
Query: 96 NGVKVLSRTIRVDHVNDYKPP 116
G V R IRVD D KPP
Sbjct: 186 GGEFVAGRAIRVDFAEDRKPP 206
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GGLP+ +E D+ +F G I N+ L + + + GF F+ ++D S +V +
Sbjct: 27 VFLGGLPFKATEKDIKKMFESCGAIENIELPMNADS-RPAGFGFLTFKDADSVAKAV-AM 84
Query: 96 NGVKVLSRTIRVDHVN 111
+G +++ R ++V +
Sbjct: 85 DGQELMGRWVKVKEAD 100
>gi|207345307|gb|EDZ72171.1| YGL044Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 306
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G ++NL ++ D TG+SKG+ FI + D S+ +V NL
Sbjct: 31 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 90
Query: 96 NGVKVLSRTIRVDH 109
NG ++ SR ++ +
Sbjct: 91 NGYQLGSRFLKCGY 104
>gi|393215994|gb|EJD01485.1| hypothetical protein FOMMEDRAFT_142096 [Fomitiporia mediterranea
MF3/22]
Length = 355
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY++ E ++I F G +V LV D+ TGK KG+ F + D + + +V NL
Sbjct: 5 VFVGNVPYNMQEEELIETFKTVGHVVGFRLVYDRDTGKPKGYGFCEFADHETAMSAVRNL 64
Query: 96 NGVKVLSRTIRVD 108
N R +R+D
Sbjct: 65 NNTDCGGRNLRID 77
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GG+ Y E + FS+YGE+V+ ++ D+ TG+S+GF FI Y ++ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 96 NGVKVLSRTIRVDHVND 112
+G + R IRV++ N+
Sbjct: 104 DGQDLHGRPIRVNYANE 120
>gi|16332012|ref|NP_442740.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|383323755|ref|YP_005384609.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326924|ref|YP_005387778.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492808|ref|YP_005410485.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438076|ref|YP_005652801.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451816164|ref|YP_007452616.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|15214210|sp|Q57014.3|RBPA_SYNY3 RecName: Full=Putative RNA-binding protein RbpA
gi|1001324|dbj|BAA10811.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|1161274|gb|AAA85379.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|339275109|dbj|BAK51596.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|359273075|dbj|BAL30594.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276245|dbj|BAL33763.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279415|dbj|BAL36932.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960353|dbj|BAM53593.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451782133|gb|AGF53102.1| RNA binding protein [Synechocystis sp. PCC 6803]
Length = 101
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L YD+SE D+ +F++YG + + L D+ TG+ +GF F+ E +++ L
Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEAL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK 120
+G + + R ++V+ P++N+
Sbjct: 63 DGAEWMGRDLKVNKAK----PRENR 83
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKDRVCIVD 184
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGL Y +E V + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 371 IFVGGLQYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAAL 430
Query: 96 NGVKVLSRTIRVDHVN 111
NG+K+ +T+ V N
Sbjct: 431 NGIKMGDKTLTVRRAN 446
>gi|19113461|ref|NP_596669.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe 972h-]
gi|15213955|sp|O43040.1|CTF1_SCHPO RecName: Full=Cleavage and termination factor 1; AltName:
Full=Transcription termination factor ctf1
gi|2950477|emb|CAA17791.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe]
Length = 363
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PYD+SE + IF+Q G + LV D TG KG+ F + D +T ++V L
Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68
Query: 96 NGVKVLSRTIRVD 108
N ++ R IRV+
Sbjct: 69 NNSELGPRKIRVE 81
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+E + + +G + +LV+D+ +G SKG+ F Y+D T ++ L
Sbjct: 145 IFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGNSKGYGFCVYQDPNVTDVACAAL 204
Query: 96 NGVKVLSRTIRVDH--VNDYKPPKDNKYTDEETKKLRTIGCAP 136
NG+K+ RT+ V N + +D+ + K L G P
Sbjct: 205 NGLKMGDRTLTVRRATANGQQAGQDHAHILSLAKSLTMNGVFP 247
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +P+ E + +FS YG +V+ +V D+ +G+S+GF F+ E +++NL
Sbjct: 129 LFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAMENL 188
Query: 96 NGVKVLSRTIRVDHVNDYKPP 116
+G ++ R +RV+ + KPP
Sbjct: 189 DGTELDGRELRVNFAGE-KPP 208
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LP+ + I SQ+G + + ++ DK++G+S+GF F+ ++ L
Sbjct: 25 VYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINAL 84
Query: 96 NGVKVLSRTIRVD 108
+G + R ++V+
Sbjct: 85 DGSDMGGRALKVN 97
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 309 NGFELAGRPMRVGHVTE 325
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 ---NGVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKDRXCIVD 184
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +FVGGL +D E + FS+YG I +++VRD+ T +S+GF F+ +E+ +
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVN 111
+ +NG V R IRVD
Sbjct: 63 MAAMNGKSVDGRMIRVDEAG 82
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKGF F+ + D +++ L
Sbjct: 241 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 300
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 301 NGFELAGRPMRVGHVTE 317
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +F+GGL ++ +E + F +YG I ++++RDK TG+S+GF F+ YE +
Sbjct: 3 DEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
+ +NG + R IRVD P+
Sbjct: 63 MTAMNGKSLDGRAIRVDEAGKGLRPR 88
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9809]
Length = 97
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG L Y++S+ D++ +F +YG++ +++ DK TG+ +GF F+ E + +++ L
Sbjct: 3 IFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIEAL 62
Query: 96 NGVKVLSRTIRVDHVND 112
+G + + R+I+V+ +
Sbjct: 63 DGAEWMGRSIKVNQARE 79
>gi|373951764|ref|ZP_09611724.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373888364|gb|EHQ24261.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 121
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A +F+ G P D+ E +++ +FSQ+G + + +V D TG+SKG+ FI D ++D
Sbjct: 2 AKLFIVGFPKDMQEIELVELFSQHGIVNTVTIVTDMQTGESKGYGFITMTDDAGAQRAID 61
Query: 94 NLNGVKVLSRTIRV 107
LNG + RTI V
Sbjct: 62 ALNGASIDDRTISV 75
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 234 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 293
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 294 NGFELAGRPMRVGHVTE 310
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S+ +F+GG+ Y + E + F++YGE+V+ ++ D+ TG+S+GF F+ + + ++
Sbjct: 39 SSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAI 98
Query: 93 DNLNGVKVLSRTIRVDHVND 112
L+G + R ++V++ ND
Sbjct: 99 QALDGRDLHGRVVKVNYAND 118
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I V LPY SE DV F ++GEI ++L DK++GK+KGF F+ Y + V + + +
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 96 NGVKVLSRTIRVDHV 110
+G + R I V++
Sbjct: 275 DGQVIKGRIIHVNYA 289
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I V GLP+ +E + F +G I + LVR K G S+ F F+ + + +++ +
Sbjct: 4 IIVKGLPHVATEKTIKEAFQSFGNITDCKLVRTK-EGVSREFAFLGFSTESEAQNAIEKM 62
Query: 96 NGVKVLSRTIRV 107
N +LS I V
Sbjct: 63 NNAYILSSKINV 74
>gi|365760727|gb|EHN02425.1| Rna15p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 313
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G ++NL ++ D TG+SKG+ FI + D S+ +V NL
Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79
Query: 96 NGVKVLSRTIRVDH 109
NG ++ SR ++ +
Sbjct: 80 NGYQLGSRFLKCGY 93
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY +E + + +G + +LV+D+ TG SKG+ F Y+D T ++ L
Sbjct: 391 IFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACAAL 450
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
NG+K+ +T+ V N P+ K E
Sbjct: 451 NGIKMGDKTLTVRRANQGANPQQPKPEQE 479
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IF+G LPYDL E ++ F ++GEI + +V+DKIT KSKG+ FI ++D S+ ++ +
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEI 168
Query: 96 N---GVKVLSRTIRVD 108
G+++ R VD
Sbjct: 169 GVHRGIQIKDRICIVD 184
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
I+VG L Y+ ++ D+ F+ +GE+ +NL+ DK TG+SKGF F+ + ++ L
Sbjct: 3 IYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGL 62
Query: 96 NGVKVLSRTIRVDHVNDYKPPKD 118
NG + R+I+ VN+ KP D
Sbjct: 63 NGTDLQGRSIK---VNEAKPRSD 82
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG +PY+ +E + IF G +V+ LV D+ +GK KG+ F ++D+ + + ++ NL
Sbjct: 15 VFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRNL 74
Query: 96 NGVKVLSRTIRVD 108
+G ++ R++RVD
Sbjct: 75 SGYELNGRSLRVD 87
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG+SKG+ FI + D +++ L
Sbjct: 190 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 249
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 250 NGFELAGRPMRVGHVTE 266
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+F+GG+ Y E + FS+YGE+V+ ++ D+ TG+S+GF FI Y ++ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 96 NGVKVLSRTIRVDHVND 112
+G + R IRV++ N+
Sbjct: 104 DGQDLHGRPIRVNYANE 120
>gi|225680448|gb|EEH18732.1| VP1-196B11 [Paracoccidioides brasiliensis Pb03]
Length = 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 35 WIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y +++
Sbjct: 44 WIVLATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYTTLPEAKAAIE 103
Query: 94 NLNGVKVLSRTIRVDHVNDYKPPKDNK 120
LNG K+L ++I+VD +PP NK
Sbjct: 104 ALNGAKLLDQSIQVDFAF-VRPPPSNK 129
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLPY L+E + + +G + +LV+D+ +G SKG+ F Y+D T ++ L
Sbjct: 152 IFVGGLPYYLTEPQIRELLESFGPLRGFDLVKDRESGNSKGYGFCVYQDPNVTDVACAAL 211
Query: 96 NGVKVLSRTIRVDH--VNDYKPPKDNKYTDEETKKLRTIGCAP 136
NG+K+ RT+ V N + +D+ + K L G P
Sbjct: 212 NGLKMGDRTLTVRRATANGQQAGQDHAHILSLAKSLTMNGVFP 254
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 50/77 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++L+E D+ +F +GE+ ++L RD TG+SKG+ F+ Y+ ++++ +
Sbjct: 184 LYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDARMAMEQM 243
Query: 96 NGVKVLSRTIRVDHVND 112
G ++ R ++V+ V+D
Sbjct: 244 EGFELAGRQLKVNTVHD 260
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 8 KNIKKLSEQELSSGSKTSWHD-QYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLV 66
+++ K S ELS+ + + + + S+ +FVGGL Y E + FSQYG+++ ++
Sbjct: 13 QSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVI 72
Query: 67 RDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHV 110
D+ TG+S+GF FI + ++ ++G + R IRV++
Sbjct: 73 MDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYA 116
>gi|312066701|ref|XP_003136395.1| cytosolic cyclophilin [Loa loa]
gi|307768442|gb|EFO27676.1| cytosolic cyclophilin [Loa loa]
Length = 322
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VGG +++E + F +GEIV++++ D TGK +GF F+ YE ++DN+
Sbjct: 15 LYVGGFGEEVNEKVLQAGFVPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNK------YTDEETKKLRTIGCAPGT 138
N ++ RTIR N +PPK N+ + D+E L+T G GT
Sbjct: 75 NDSELFGRTIR---CNFARPPKANERSQRPVWADDEW--LKTYGTGEGT 118
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D +FVGGL +D E + FS+YG I +++VRD+ T +S+GF F+ +E+ +
Sbjct: 3 DEGKLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDA 62
Query: 92 VDNLNGVKVLSRTIRVDHVN 111
+ +NG V R IRVD
Sbjct: 63 MAAMNGKSVDGRMIRVDEAG 82
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 3 PLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVN 62
PL V+ + E S D++ D +FVG LP+ + + +F Q G +
Sbjct: 52 PLEPVRAAATAAVTEELEAEGRSGGDEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEM 111
Query: 63 LNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+ ++ DK+TG+S+GF F+ ++VD NG + R++RV+
Sbjct: 112 VEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVN 157
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VG L + + + +FS+ GE++ ++ D+ +G+S+GF F+ Y +
Sbjct: 177 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 236
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
+ NL+G + R IRV V + KPP+
Sbjct: 237 ISNLDGADLDGRQIRV-TVAESKPPR 261
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|255636731|gb|ACU18701.1| unknown [Glycine max]
Length = 195
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D + I+VGGLPYD +E + +F+ YG I+++ ++ D T + K +CF+ + + RS + +
Sbjct: 5 DDSSIYVGGLPYDATEETIRTVFNLYGAILDVKIINDPRT-RGKCYCFVTFTNPRSAIDA 63
Query: 92 VDNLNGVKVLSRTIRVDHV 110
++++NG + R ++V+ V
Sbjct: 64 INDMNGRTIDGRVVKVNGV 82
>gi|19114796|ref|NP_593884.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|74698319|sp|Q9P6P7.1|YKCG_SCHPO RecName: Full=Uncharacterized RNA-binding protein C644.16
gi|7708595|emb|CAB90143.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 422
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S ++VG +PY+++E VI IF Q G + + LV D +G+ KG+ F Y D + +V
Sbjct: 4 SCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAV 63
Query: 93 DNLNGVKVLSRTIRVD 108
NLN +R +RVD
Sbjct: 64 RNLNNYDAGTRRLRVD 79
>gi|425434850|ref|ZP_18815314.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
gi|389675574|emb|CCH95321.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC 9432]
Length = 97
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG L Y++S+ D++ +F YG++ +++ DK TG+ +GF F+ E++ +++ L
Sbjct: 3 IFVGNLSYEISQDDLVEVFQDYGKVQRVHIPVDKETGRKRGFAFVEMENKAQEAKAIEAL 62
Query: 96 NGVKVLSRTIRVDHVND 112
+G + R+I+V+ D
Sbjct: 63 DGADWMGRSIKVNEARD 79
>gi|355681348|gb|AER96779.1| cleavage stimulation factor, 3 pre-RNA subunit 2, tau [Mustela
putorius furo]
Length = 174
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 41 LPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKV 100
+PY+ +E + IFS+ G +V+ LV D+ TGK KG+ F Y+DQ + + ++ NLNG +
Sbjct: 2 IPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREF 61
Query: 101 LSRTIRVDHVNDYKPPKDNKYTDEETKKLRTIGCA 135
R +RV DN +++ ++L+++G A
Sbjct: 62 SGRALRV----------DNAASEKNKEELKSLGPA 86
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 50/78 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L+++ TG+SKGF FI + D +++ L
Sbjct: 101 LYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 160
Query: 96 NGVKVLSRTIRVDHVNDY 113
NG ++ R ++V HV D+
Sbjct: 161 NGFELAGRPMKVGHVTDH 178
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG SKG+ FI + D +++ L
Sbjct: 320 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 379
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 380 NGFELAGRPMRVGHVTE 396
>gi|384249807|gb|EIE23288.1| hypothetical protein COCSUDRAFT_23864, partial [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGLPY L+E + +G I + +LV+D+ TG SKG+ F+ Y D T ++ L
Sbjct: 265 VFVGGLPYYLNEEQCRELLGSFGGIKSFDLVKDRETGNSKGYGFVVYTDPNVTDIACAGL 324
Query: 96 NGVKVLSRTIRV 107
NG+++ RT+ V
Sbjct: 325 NGMRMGERTLTV 336
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 49/76 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVG L + G + F Q+G++++ +++D+ TG+S+GF FI ++++ +++ L
Sbjct: 10 LFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEAL 69
Query: 96 NGVKVLSRTIRVDHVN 111
NG ++ R IRV++ N
Sbjct: 70 NGQELDGREIRVNYAN 85
>gi|17539754|ref|NP_502291.1| Protein F11A10.7 [Caenorhabditis elegans]
gi|15718191|emb|CAC70081.1| Protein F11A10.7 [Caenorhabditis elegans]
Length = 394
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFS-QYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
KD A IFVG LP++++E +I FS Q G + + +VRDK TGK KGF F+ ++ S
Sbjct: 244 KDMA-IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Query: 90 LSVDNLNGVKVLSRTIRVDHV 110
L++ ++ +K+ R +R+ V
Sbjct: 303 LAL-SMETIKMEKRDLRITKV 322
>gi|430812117|emb|CCJ30453.1| unnamed protein product [Pneumocystis jirovecii]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 33 SAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSV 92
S +FVG +PYD+SE + IF Q G I LV DK T K KG+ F Y D + +V
Sbjct: 7 SKVVFVGNIPYDVSEEQLKDIFRQIGPINRFRLVFDKETNKPKGYGFCEYPDVATASAAV 66
Query: 93 DNLNGVKVLSRTIRVDHVNDYKPPKDN 119
NLN + R +RVD + P +DN
Sbjct: 67 RNLNNHDINGRQLRVDFA-ESDPAQDN 92
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 30 YKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTV 89
Y+ + ++VG LP+D+ G + +FS++G++V +V D+ TG+S+GF F+ D
Sbjct: 73 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELN 132
Query: 90 LSVDNLNGVKVLSRTIRVDHVNDYKPPK 117
++ L+G + R IRV+ V + +PP+
Sbjct: 133 EAISALDGQNLEGRAIRVN-VAEERPPR 159
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+FVGGL ++ E + +FS+YG++ + ++RD+ TG S+GF F+ +E ++ ++
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 96 NGVKVLSRTIRVDHV 110
NG + R IRVD
Sbjct: 67 NGRSLEGRQIRVDRA 81
>gi|156348347|ref|XP_001621815.1| hypothetical protein NEMVEDRAFT_v1g47988 [Nematostella vectensis]
gi|156208091|gb|EDO29715.1| predicted protein [Nematostella vectensis]
Length = 78
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + E D+ F +YG + ++ ++ DK TG+SKGF F+ + ++D L
Sbjct: 3 IFVGSLPFSIEEADLRGFFEEYGAVDSVKIISDKFTGRSKGFGFVEMPNDAEAQKAIDEL 62
Query: 96 NGVKVLSRTIRVD 108
NG V RTI V+
Sbjct: 63 NGGTVEGRTIVVN 75
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp. CB0101]
Length = 176
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVG LP+ + DV +F+ +GE+ N L ++ TG+ +GF F+ D+ S ++D L
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVTNCFLPLERDTGRKRGFAFVELADEDSESRAIDAL 62
Query: 96 NGVKVLSRTIRVD 108
G +++ R +R++
Sbjct: 63 QGAELMGRPLRIN 75
>gi|151943247|gb|EDN61560.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407008|gb|EDV10275.1| mRNA 3'-end processing protein RNA15 [Saccharomyces cerevisiae
RM11-1a]
gi|259146458|emb|CAY79715.1| Rna15p [Saccharomyces cerevisiae EC1118]
Length = 295
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G ++NL ++ D TG+SKG+ FI + D S+ +V NL
Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79
Query: 96 NGVKVLSRTIRVDH 109
NG ++ SR ++ +
Sbjct: 80 NGYQLGSRFLKCGY 93
>gi|6321394|ref|NP_011471.1| Rna15p [Saccharomyces cerevisiae S288c]
gi|133144|sp|P25299.1|RNA15_YEAST RecName: Full=mRNA 3'-end-processing protein RNA15
gi|172434|gb|AAA34984.1| RNA15 [Saccharomyces cerevisiae]
gi|1322531|emb|CAA96746.1| RNA15 [Saccharomyces cerevisiae]
gi|256271334|gb|EEU06400.1| Rna15p [Saccharomyces cerevisiae JAY291]
gi|285812156|tpg|DAA08056.1| TPA: Rna15p [Saccharomyces cerevisiae S288c]
gi|392299215|gb|EIW10309.1| Rna15p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 296
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++G +PYD +E ++ + S G ++NL ++ D TG+SKG+ FI + D S+ +V NL
Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79
Query: 96 NGVKVLSRTIRVDH 109
NG ++ SR ++ +
Sbjct: 80 NGYQLGSRFLKCGY 93
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%)
Query: 1 MNPLTNVKNIKKLSEQELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEI 60
PL V+ + E S D++ D +FVG LP+ + + +F Q G +
Sbjct: 48 FRPLEPVRAAATAAVTEELEAEGRSGGDEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSV 107
Query: 61 VNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVD 108
+ ++ DK+TG+S+GF F+ ++VD NG + R++RV+
Sbjct: 108 EMVEVIYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVN 155
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ ++VG L + + + +FS+ GE++ ++ D+ +G+S+GF F+ Y +
Sbjct: 175 DANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENA 234
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPK 117
+ NL+G + R IRV V + KPP+
Sbjct: 235 ISNLDGADLDGRQIRV-TVAESKPPR 259
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 53/76 (69%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
+++ I++G + ++++E V IFSQ+G +++ L+++ TGK KGF F+ +E ++S +
Sbjct: 767 EASRIYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADDA 826
Query: 92 VDNLNGVKVLSRTIRV 107
+ +NG ++L R+I+V
Sbjct: 827 IATMNGFELLGRSIKV 842
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+D + I+VG L + L+E + FS +G I +L L +D +GKSKG+ FI Y++Q S
Sbjct: 585 QDQSRIYVGSLHFSLTEDVIRATFSVFGNIKSLALGKDA-SGKSKGYAFIEYDNQESAAK 643
Query: 91 SVDNLNGVKVLSRTIRV 107
++ ++ + R I+V
Sbjct: 644 ALQSMTNYVMCGRAIKV 660
>gi|212540516|ref|XP_002150413.1| RNA binding protein (Rbm8A), putative [Talaromyces marneffei ATCC
18224]
gi|210067712|gb|EEA21804.1| RNA binding protein (Rbm8A), putative [Talaromyces marneffei ATCC
18224]
Length = 157
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 35 WIFVG-GLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
WI + + + SE DV +F++YGEI N NL D+ TG KG+ I Y +++
Sbjct: 39 WIIIATNIHEEASEEDVTDLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEARSAIE 98
Query: 94 NLNGVKVLSRTIRVDHVNDYKPPKDNK 120
LNG K+L +T+ VD+ +PP NK
Sbjct: 99 ALNGAKLLDQTLSVDYAF-VRPPPGNK 124
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG L ++++E + IF +G+I N+ L++D TG SKG+ FI + D +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 96 NGVKVLSRTIRVDHVND 112
NG ++ R +RV HV +
Sbjct: 325 NGFELAGRPMRVGHVTE 341
>gi|229527101|ref|ZP_04416495.1| RNA-binding protein [Vibrio cholerae 12129(1)]
gi|417818771|ref|ZP_12465392.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE39]
gi|423943713|ref|ZP_17733098.1| RNA recognition motif family protein [Vibrio cholerae HE-40]
gi|423973292|ref|ZP_17736643.1| RNA recognition motif family protein [Vibrio cholerae HE-46]
gi|229335332|gb|EEO00815.1| RNA-binding protein [Vibrio cholerae 12129(1)]
gi|340044120|gb|EGR05075.1| ss-DNA binding 12RNP2 domain protein [Vibrio cholerae HE39]
gi|408662518|gb|EKL33454.1| RNA recognition motif family protein [Vibrio cholerae HE-40]
gi|408666528|gb|EKL37313.1| RNA recognition motif family protein [Vibrio cholerae HE-46]
Length = 152
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LPY +E V +F++YGE+ + L++DK TGK +GF F+ ++ ++D L
Sbjct: 66 LYVGNLPYKANESHVKELFAEYGEVFAVRLMKDKRTGKRRGFGFVVIAAGQAQT-AIDAL 124
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
N + + RT++V ND P D + +++
Sbjct: 125 NEKEYMQRTLKVRIAND--PKSDEEMAEQD 152
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 31 KDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVL 90
+ S I+VG +P DL ++ IF +YG IV L D +G KGF F+ +ED R
Sbjct: 3 RSSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEE 62
Query: 91 SVDNLNGVKVLSRTIRVDHVN 111
S D L G ++ R++R++
Sbjct: 63 SFDRLQGYRIGKRSLRLEFAT 83
>gi|443723647|gb|ELU11974.1| hypothetical protein CAPTEDRAFT_144233 [Capitella teleta]
Length = 461
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 32 DSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLS 91
D+ +FVG +P + E D+ +F ++G + LN++RDK+TG+SKG CF+ + ++S + +
Sbjct: 14 DAIKMFVGQIPRSMDESDLRKMFEEFGPVFQLNVLRDKVTGQSKGCCFVTFYTRKSALEA 73
Query: 92 VDNLNGVKVLSRTIRVDHVNDYKPPKDNKYTDE 124
+ L+ +K ++ + H KP K +E
Sbjct: 74 QNQLHNIKTMA---GMQHPIQMKPADCEKRNEE 103
>gi|403362029|gb|EJY80730.1| RNA-binding protein [Oxytricha trifallax]
Length = 762
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 43/65 (66%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
+++ G+P ++E D++ F +YG+I+ + ++RD IT SKGF ++ YE +++ L
Sbjct: 390 VYIAGIPRWVNESDLLKTFEKYGKILEVKVIRDHITKNSKGFAYVLYERSSDAQRAIEGL 449
Query: 96 NGVKV 100
+GV+V
Sbjct: 450 DGVRV 454
>gi|261488364|emb|CBH19557.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
gi|261488394|emb|CBH19572.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 125
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
IFVGGLP D +E D + F QYGEIV+ ++RDK T + +GF FI Y + +D++
Sbjct: 25 IFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDDI 84
Query: 96 ---NGVKV-LSRTIRVDHVN--DYK 114
NG +V + RTI D V D+K
Sbjct: 85 HEFNGKQVEIKRTIPKDSVQSKDFK 109
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 18 LSSGSKT-SWHDQYKDSAWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKG 76
+SSG+ T + Q + I+VG L Y L+E D+ +F +G IVN+++ R+ +SKG
Sbjct: 273 VSSGTTTGAGPRQSSQISRIYVGSLDYSLNEADLKQVFGSFGPIVNIDMPREG--NRSKG 330
Query: 77 FCFICYEDQRSTVLSVDNLNGVKVLSRTIRV 107
FCFI Y Q S +++ +N + R IRV
Sbjct: 331 FCFIEYTSQESAEMALATMNRFVLKGRPIRV 361
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 1 MNPLTNVKNIKKLSEQ------ELSSGSKTSWHDQYKDSAWIFVGGLPYDLSEGDVICIF 54
+NP V N ++ Q E + G+ + H Q + I++G +PY + D+ IF
Sbjct: 389 INPNIAVFNNNHITHQNHQIQSETTHGTGIATHSQNR----IYIGSVPYSFTTDDLRHIF 444
Query: 55 SQYGEIVNLNLVRD-KITGKSKGFCFICYEDQRSTVLSVDNLNGVKVLSRTIRVDHVNDY 113
+G I++ L+ + G +G+ FI + L+++ +NG +V + ++V+
Sbjct: 445 KTFGVILSCQLIPSIEKPGTHRGYGFIEFGTADQAKLAIETMNGFEVGGKQLKVNVATAL 504
Query: 114 KP 115
KP
Sbjct: 505 KP 506
>gi|261329162|emb|CBH12141.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 170
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 45 LSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNLN 96
LSEGD+ +FSQ+GE++++ LVR + TG+ G F+ +ED RS +L+ D +N
Sbjct: 64 LSEGDIATVFSQFGEVIDVRLVRHQRTGRFLGTAFVKFEDYRSAILAADEMN 115
>gi|153217405|ref|ZP_01951156.1| RNA-binding protein [Vibrio cholerae 1587]
gi|124113575|gb|EAY32395.1| RNA-binding protein [Vibrio cholerae 1587]
Length = 152
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 36 IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVDNL 95
++VG LPY +E V +F++YGE+ + L++DK TGK +GF F+ ++ ++D L
Sbjct: 66 LYVGNLPYKANESHVKELFAEYGEVFAVRLMKDKRTGKRRGFGFVVIAAGQAQT-AIDAL 124
Query: 96 NGVKVLSRTIRVDHVNDYKPPKDNKYTDEE 125
N + + RT++V ND P D + +++
Sbjct: 125 NEKEYMQRTLKVRIAND--PKSDEEMAEQD 152
>gi|219109993|ref|XP_002176749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411284|gb|EEC51212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 499
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 49/76 (64%)
Query: 34 AWIFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGFCFICYEDQRSTVLSVD 93
A +FV LP+DL++ D+ F+ +G +++ + DK +G+SKGF F+ Y+ + +++
Sbjct: 400 ANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDKYSGESKGFGFVSYDSVIAAEAAIE 459
Query: 94 NLNGVKVLSRTIRVDH 109
+NG ++ ++ ++V H
Sbjct: 460 QMNGFQIGNKRLKVQH 475
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 19 SSGSKTSWHDQYKDSAW-IFVGGLPYDLSEGDVICIFSQYGEIVNLNLVRDKITGKSKGF 77
SSG+ ++ +D +D +FVG +P +SE DV F +G + ++ ++RDK TG +G
Sbjct: 107 SSGNASADNDDGEDDPMKLFVGQVPKAMSEEDVFPTFDSFGPLKDVAIIRDKHTGLHRGC 166
Query: 78 CFICY 82
F+ Y
Sbjct: 167 AFVTY 171
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.127 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,139,084,598
Number of Sequences: 23463169
Number of extensions: 133364590
Number of successful extensions: 2606121
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 24492
Number of HSP's successfully gapped in prelim test: 11311
Number of HSP's that attempted gapping in prelim test: 2136393
Number of HSP's gapped (non-prelim): 322342
length of query: 199
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 64
effective length of database: 9,191,667,552
effective search space: 588266723328
effective search space used: 588266723328
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 73 (32.7 bits)