BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10782
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P97412|LYST_MOUSE Lysosomal-trafficking regulator OS=Mus musculus GN=Lyst PE=1 SV=1
Length = 3788
Score = 145 bits (366), Expect = 7e-35, Method: Composition-based stats.
Identities = 69/106 (65%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 2 AGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLA 61
AGRS+NDLMQYPV PFILSDY S TLDL DP +RNL KP+AVQ K+ E YV+ Y YL
Sbjct: 3140 AGRSFNDLMQYPVFPFILSDYVSETLDLNDPSIYRNLSKPIAVQYKEKEDRYVDTYKYLE 3199
Query: 62 REMCDAVGGVNQ----EPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
E + +PYHYGSHYSNSGTVLHFLVR+PPFT MFL
Sbjct: 3200 EEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMPPFTKMFL 3245
>sp|Q9TTK4|LYST_BOVIN Lysosomal-trafficking regulator OS=Bos taurus GN=LYST PE=1 SV=1
Length = 3796
Score = 145 bits (365), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/106 (64%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
Query: 2 AGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLA 61
AGRS+NDLMQYPV PFIL+DY S TLDL+DP +RNL KP+AVQ K+ E YV+ Y YL
Sbjct: 3148 AGRSFNDLMQYPVFPFILADYVSETLDLSDPSVYRNLSKPIAVQYKEKEDRYVDTYKYLE 3207
Query: 62 REMCDAVGGVNQ----EPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
E + +PYHYGSHYSNSGTVLHFLVR+PPFT MFL
Sbjct: 3208 EEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMPPFTKMFL 3253
>sp|Q99698|LYST_HUMAN Lysosomal-trafficking regulator OS=Homo sapiens GN=LYST PE=1 SV=3
Length = 3801
Score = 139 bits (349), Expect = 7e-33, Method: Composition-based stats.
Identities = 67/106 (63%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Query: 2 AGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLA 61
AGRS+NDLMQYPV PFIL+DY S TLDL D +RNL KP+AVQ K+ E YV+ Y YL
Sbjct: 3153 AGRSFNDLMQYPVFPFILADYVSETLDLNDLLIYRNLSKPIAVQYKEKEDRYVDTYKYLE 3212
Query: 62 REMCDAVGGVNQ----EPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
E + +PYHYGSHYSNSGTVLHFLVR+PPFT MFL
Sbjct: 3213 EEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMPPFTKMFL 3258
>sp|Q86JF2|LVSB_DICDI BEACH domain-containing protein lvsB OS=Dictyostelium discoideum
GN=lvsB PE=4 SV=1
Length = 4118
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 72/104 (69%), Gaps = 8/104 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRS+NDL QYP+ PFIL DY+S LDL +P +FR+ KPM QD K ++ YN L
Sbjct: 3523 LAGRSFNDLTQYPIFPFILRDYESEVLDLENPNTFRDFTKPMGAQDPKRLEKFIEKYNDL 3582
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+N++PYHYGSHYSN G+VLHFLVR+ PFTS F++
Sbjct: 3583 LE--------MNEKPYHYGSHYSNIGSVLHFLVRLQPFTSYFID 3618
>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus
GN=Wdfy3 PE=1 SV=1
Length = 3508
Score = 108 bits (270), Expect = 9e-24, Method: Composition-based stats.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRSYNDLMQYPV P+ILSDY S +DLT+PK+FRNL KPM Q + + Y Y
Sbjct: 2697 LAGRSYNDLMQYPVFPWILSDYDSEEVDLTNPKTFRNLAKPMGAQTDERLAQYKKRY--- 2753
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
++ D G YHYG+HYS++ V +LVR+ PFT +FL
Sbjct: 2754 -KDWEDPNG--ETPAYHYGTHYSSAMIVASYLVRMEPFTQIFL 2793
>sp|Q6ZS30|NBEL1_HUMAN Neurobeachin-like protein 1 OS=Homo sapiens GN=NBEAL1 PE=2 SV=3
Length = 2694
Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
MAGR+YNDL QYPV P+IL DY S LDL +P FR+L KP+ V ++KN Y
Sbjct: 2024 MAGRTYNDLAQYPVFPWILQDYTSEELDLNNPAVFRDLSKPIGVVNEKNAKAMREKYENF 2083
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
D +G +++ +HYG+HYSNS V+H+L+R+ PFT++ +
Sbjct: 2084 E----DPMGTIDK--FHYGTHYSNSAGVMHYLIRVEPFTTLHI 2120
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens
GN=WDFY3 PE=1 SV=2
Length = 3526
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRSYNDLMQYPV P+IL+DY S +DLT+PK+FRNL KPM Q + + Y Y
Sbjct: 2715 LAGRSYNDLMQYPVFPWILADYDSEEVDLTNPKTFRNLAKPMGAQTDERLAQYKKRY--- 2771
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
++ D G YHYG+HYS++ V +LVR+ PFT +FL
Sbjct: 2772 -KDWEDPNG--ETPAYHYGTHYSSAMIVASYLVRMEPFTQIFL 2811
>sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2
Length = 2754
Score = 103 bits (256), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++L DY S TLDL++P FR+L KP+ V + K+ Y
Sbjct: 2085 IAGRTYNDLSQYPVFPWVLQDYVSPTLDLSNPAVFRDLSKPIGVVNPKHAQLVREKYESF 2144
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSM 101
D G +++ +HYG+HYSN+ V+H+L+R+ PFTS+
Sbjct: 2145 E----DPAGTIDK--FHYGTHYSNAAGVMHYLIRVEPFTSL 2179
>sp|P25356|BPH1_YEAST Beige protein homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BPH1 PE=4 SV=2
Length = 2167
Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRS+NDL QYPV P++++DY+S LDL +PK++R+L KPM Q +K + ++ Y L
Sbjct: 1577 LAGRSFNDLTQYPVFPWVIADYESNVLDLENPKTYRDLSKPMGAQSEKRKLQFIERYEAL 1636
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
A ++ + P+HYG+HYS++ V +L+R+ PF FL
Sbjct: 1637 A-----SLENADSAPFHYGTHYSSAMIVSSYLIRLKPFVESFL 1674
>sp|E7FAW3|NBEL2_DANRE Neurobeachin-like protein 2 OS=Danio rerio GN=nbeal2 PE=1 SV=1
Length = 2801
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++L DY SA LDL DP FR+L KP+ V + ++ + Y
Sbjct: 2131 IAGRTYNDLSQYPVFPWVLCDYTSAELDLDDPAVFRDLSKPIGVVNPRHAQNVREKYESF 2190
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
D G +++ +HYG+HYSN+ V+H+++R PFTS+ +
Sbjct: 2191 E----DPTGTIDK--FHYGTHYSNAAGVMHYMIRTEPFTSLHI 2227
>sp|Q6ZQA0|NBEL2_MOUSE Neurobeachin-like protein 2 OS=Mus musculus GN=Nbeal2 PE=2 SV=2
Length = 2742
Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++L DY S LDL++P FR+L KP+ V + K+ Y
Sbjct: 2073 IAGRTYNDLSQYPVFPWVLQDYVSPVLDLSNPAVFRDLSKPIGVVNPKHAQLVREKYESF 2132
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSM 101
D G +++ +HYG+HYSN+ V+H+L+R+ PFTS+
Sbjct: 2133 E----DPAGTIDK--FHYGTHYSNAAGVMHYLIRVEPFTSL 2167
>sp|Q7LKZ7|BPH1_SCHPO Beige protein homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lvs1 PE=1 SV=2
Length = 2609
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++++DY S LDL +PK++RN KPM Q + ES + Y+ L
Sbjct: 1939 LAGRTYNDLTQYPVFPWVIADYTSKELDLNNPKTYRNFCKPMGAQHPERESQFNERYDLL 1998
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
+ Q+P+HYG+HYS++ V +L+R+ PF +L
Sbjct: 1999 L-----GLNDSQQQPFHYGTHYSSAMIVCSYLIRLRPFVDSYL 2036
>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3
Length = 2946
Score = 99.0 bits (245), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++L++Y+S LDLT P +FR+L KP+ + K Y Y
Sbjct: 2306 IAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETW 2365
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLNS 105
+ PYHY +HYS + + L +LVRI PFT+ FLN+
Sbjct: 2366 EDD--------QSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNA 2402
>sp|Q55DM1|LVSA_DICDI BEACH domain-containing protein lvsA OS=Dictyostelium discoideum
GN=lvsA PE=4 SV=2
Length = 3619
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 19/112 (16%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRSYNDL QYPV P++LSDY+S LD+ DPK +R+L KPM ++ + +
Sbjct: 3004 LAGRSYNDLTQYPVFPWVLSDYESEELDIDDPKVYRDLSKPMGALEESRAQKFRERF--- 3060
Query: 61 AREMCDAVGGVNQEP---------YHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
E D +QEP +HYG+HYS++ VL++L+R+ PFT FL
Sbjct: 3061 --ENWD-----DQEPNEHGHKVPKFHYGTHYSSAAIVLYYLIRLEPFTQHFL 3105
>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1
Length = 2936
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++L++Y+S LDLT P +FR+L KP+ + K Y Y
Sbjct: 2296 IAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYETW 2355
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLNS 105
+ P+HY +HYS + + L +LVRI PFT+ FLN+
Sbjct: 2356 EED--------QSPPFHYNTHYSTATSALSWLVRIEPFTTFFLNA 2392
>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo
sapiens GN=LRBA PE=1 SV=4
Length = 2863
Score = 94.7 bits (234), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRSYNDL QYPV P+++++Y+S LDLT P +FR+L KP+ + K + + Y
Sbjct: 2232 IAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERYESW 2291
Query: 61 AREMCDAVGGVNQEP-YHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+ Q P +HYG+HYS + VL +L+RI PFT+ FLN
Sbjct: 2292 EDD---------QVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLN 2327
>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus
musculus GN=Lrba PE=1 SV=1
Length = 2856
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 10/105 (9%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGRSYNDL QYPV P+++++Y+S LDLT P +FR+L KP+ + K + + +
Sbjct: 2225 IAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERFESW 2284
Query: 61 AREMCDAVGGVNQEP-YHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+ Q P +HYG+HYS + VL +L+RI PFT+ FLN
Sbjct: 2285 EDD---------QVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLN 2320
>sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens
GN=WDFY4 PE=1 SV=3
Length = 3184
Score = 93.2 bits (230), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 2 AGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLA 61
AGR+ ND MQYPV P++L+DY S TL+L +PK FR+L KPM Q K+ + ++ + +
Sbjct: 2560 AGRTCNDYMQYPVFPWVLADYTSETLNLANPKIFRDLSKPMGAQTKERKLKFIQRFKEVE 2619
Query: 62 REMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMF 102
+ D HY +HYS++ V +LVR+PPFT F
Sbjct: 2620 KTEGDMTVQC-----HYYTHYSSAIIVASYLVRMPPFTQAF 2655
>sp|Q54U63|LVSC_DICDI BEACH domain-containing protein lvsC OS=Dictyostelium discoideum
GN=lvsC PE=4 SV=2
Length = 2491
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P++++DY S LDL ++FR+L KP+ ++K + + Y
Sbjct: 1860 IAGRTYNDLTQYPVFPWVIADYTSPVLDLNKAETFRDLSKPIGALNEKRLEIFKDRYESF 1919
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+ ++YGSHYS++G VL +L+R+ PFT+ FLN
Sbjct: 1920 DDPVI--------PKFYYGSHYSSAGIVLFYLIRLEPFTTQFLN 1955
>sp|Q54RQ8|LVSE_DICDI BEACH domain-containing protein lvsE OS=Dictyostelium discoideum
GN=lvsE PE=4 SV=1
Length = 2192
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YND+ QYPV P I+SDYKS LDL D +SFR+L KPM +++ + Y +
Sbjct: 1536 IAGRTYNDISQYPVFPQIISDYKSEFLDLNDSRSFRDLSKPMGALNQQRLDTLIKRYQSM 1595
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+ P+ YGSHYSN G V ++ VR+ PFTS L+
Sbjct: 1596 -----QSAQDPTMPPFLYGSHYSNFGIVAYYQVRLEPFTSFHLS 1634
>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3
Length = 3578
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 65/103 (63%), Gaps = 8/103 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYP+ P++L++Y+S LDL+ P ++R+L KP+ + +++ Y
Sbjct: 2937 IAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESW 2996
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
+ P+HYG+HYS + L++LVR+ PFT+MFL
Sbjct: 2997 DSDTIP--------PFHYGTHYSTAAFTLNWLVRVEPFTTMFL 3031
>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2
PE=3 SV=1
Length = 2531
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR++NDL QYPV P+IL++Y S TLDL+ +FR+L KP+ ++ + + Y
Sbjct: 1873 VAGRTFNDLSQYPVFPWILTNYTSDTLDLSVASNFRDLSKPIGALNEARRKFFTDRYASW 1932
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
++ A +HYG+HYS L++L+R+ PF SMF+N
Sbjct: 1933 DDDLVPA--------FHYGTHYSTPAFTLNWLLRLEPFASMFIN 1968
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2 PE=2
SV=3
Length = 2507
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR++NDL QYPV P+IL++Y S TLDL+ +FR+L KP+ + + + Y
Sbjct: 1849 VAGRTFNDLSQYPVFPWILTNYTSDTLDLSVASNFRDLSKPIGALSEARRKFFNDRYTSW 1908
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFLN 104
+ A +HYG+HYS L++L+R+ PF SMF+N
Sbjct: 1909 DDDQVPA--------FHYGTHYSTPAFTLNWLLRVEPFASMFIN 1944
>sp|Q92636|FAN_HUMAN Protein FAN OS=Homo sapiens GN=NSMAF PE=1 SV=2
Length = 917
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+A RS NDL QYPV P+I+ DY S+ LDL++P +FR+L KP+ +K+ + Y +
Sbjct: 322 LADRSCNDLSQYPVFPWIIHDYSSSELDLSNPGTFRDLSKPVGALNKERLERLLTRYQEM 381
Query: 61 AREMCDAVGGVNQEP-YHYGSHYSNSGTVLHFLVRIPP 97
EP + YGSHYS+ G VL +LVRI P
Sbjct: 382 P------------EPKFMYGSHYSSPGYVLFYLVRIAP 407
>sp|Q55AV3|LVSD_DICDI BEACH domain-containing protein lvsD OS=Dictyostelium discoideum
GN=lvsD PE=4 SV=2
Length = 2967
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR+YNDL QYPV P+I+ D S TL++ D +R+L KP+ + ++ +
Sbjct: 2234 IAGRTYNDLNQYPVFPWIIGDNSSNTLNINDQSIYRDLSKPIGALNPTRLELFMERWTQC 2293
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTSMFL 103
E+ + YG+HYS+SG+V+ FL+R PFTS F+
Sbjct: 2294 PAEI---------PAFMYGTHYSSSGSVMFFLMRCEPFTSHFI 2327
>sp|O35242|FAN_MOUSE Protein FAN OS=Mus musculus GN=Nsmaf PE=2 SV=2
Length = 920
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+A RS NDL QYPV P+I+SDY S LDL++P +FR+L KP+ + + + Y +
Sbjct: 322 LADRSCNDLSQYPVFPWIISDYSSPELDLSNPATFRDLSKPVGALNAERLERLLTRYQEM 381
Query: 61 AREMCDAVGGVNQEP-YHYGSHYSNSGTVLHFLVRIPP 97
EP + YGSHYS+ G VL +LVRI P
Sbjct: 382 P------------EPRFMYGSHYSSPGYVLFYLVRIAP 407
>sp|Q54PP7|LVSF_DICDI BEACH domain-containing protein lvsF OS=Dictyostelium discoideum
GN=lvsF PE=4 SV=1
Length = 1154
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYL 60
+AGR++NDL QYPV P+I++DY+S TLDL ++FR+L KP+ + + + + Y+ +
Sbjct: 421 LAGRTFNDLTQYPVFPWIIADYQSTTLDLNRNETFRDLSKPIGALNPTRLATFQDRYHQI 480
Query: 61 AREMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPP 97
+ Q + YG+HYS VL+FLVR P
Sbjct: 481 PDD---------QPKFLYGTHYSTPAYVLYFLVRQVP 508
>sp|O84879|PMPG_CHLTR Probable outer membrane protein PmpG OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=pmpG PE=2 SV=1
Length = 1013
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 7 NDLMQYPVLPFILSDYKSATLDLTDPKSFR-----NLKKPMAVQDKKNESHYVNNYNYLA 61
N+L + F +D++S T + ++FR NL P+ V+ + S + N Y+++
Sbjct: 877 NELRPFVQAEFSYADHESFTEEGDQARAFRSGHLMNLSVPVGVKFDRCSSTHPNKYSFMG 936
Query: 62 REMCDA 67
+CDA
Sbjct: 937 AYICDA 942
>sp|Q9HDW1|PGPS1_SCHPO CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pgs1 PE=3 SV=2
Length = 502
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 13 PVLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLAR---------- 62
PV+PF L S LT+P+ FR +A K + N +L+R
Sbjct: 219 PVIPFTLKWNNSCPNPLTNPQEFR-----VAASAKIQQLLQGNREKFLSRNPSKPLSSVY 273
Query: 63 --EMCDAVGGVNQEPYHYGSHYSNSGTVLHFLVRIPPFTS 100
E+ + G N +P+H Y S V +P TS
Sbjct: 274 GSELINQAGDDNNKPFH---KYEESAIVYPLFQCVPILTS 310
>sp|D4A929|WDR81_RAT WD repeat-containing protein 81 OS=Rattus norvegicus GN=Wdr81 PE=1
SV=1
Length = 1933
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKS-FRNLKKPMAVQDKKNESHYVNNYNY 59
+AGR D +PVLP++ +D T P FR+L+K +K ++ ++ Y
Sbjct: 365 LAGRRQGDPNYHPVLPWV--------VDFTTPYGRFRDLRKSKFRLNKGDKQL---DFTY 413
Query: 60 -LAREMCDAVGGVNQEPYHYGSHYSN 84
+ R+ A G + EP H H S+
Sbjct: 414 EMTRQAFVAGGAGSGEPLHVPHHISD 439
>sp|A4XYY4|PROA_PSEMY Gamma-glutamyl phosphate reductase OS=Pseudomonas mendocina (strain
ymp) GN=proA PE=3 SV=1
Length = 421
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 14 VLPFILSDYKSATLDLTDPKSFRNLKKPMAVQDKKNESHYVNNYNYLAREMCDAVGGVNQ 73
VLP + + Y+ ++L + R L ++ +++ N LA + D++ +
Sbjct: 276 VLPPLAAIYRDKGVELRGDAATRALLGSDVLEASEDDWFAEYNAPILAIRIVDSLDAAIE 335
Query: 74 EPYHYGSHYSNSGTVLHF 91
HYGSH+++S HF
Sbjct: 336 HINHYGSHHTDSIITEHF 353
>sp|P12691|ALKB_PSEOL Alkane 1-monooxygenase OS=Pseudomonas oleovorans GN=alkB PE=1 SV=1
Length = 401
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 4 RSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAV 44
RSY L +P LP + + Y A L P+ FR++ P V
Sbjct: 321 RSYQSLRDFPGLPALPTGYPGAFLMAMIPQWFRSVMDPKVV 361
>sp|Q9WWW6|ALKB_PSEPU Alkane 1-monooxygenase OS=Pseudomonas putida GN=alkB PE=3 SV=1
Length = 402
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 4 RSYNDLMQYPVLPFILSDYKSATLDLTDPKSFRNLKKPMAV 44
RSY L +P LP + + Y A L P+ FR++ P V
Sbjct: 321 RSYQSLRDFPGLPALPTGYPGAFLMAMIPQWFRSVMDPKVV 361
>sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 OS=Mus musculus GN=Wdr81 PE=1 SV=2
Length = 1934
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 1 MAGRSYNDLMQYPVLPFILSDYKSATLDLTDPKS-FRNLKKPMAVQDKKNESHYVNNYNY 59
+AGR D +PVLP++ +D T P FR+L+K +K ++ ++ Y
Sbjct: 367 LAGRRQGDPNYHPVLPWV--------VDFTTPYGRFRDLRKSKFRLNKGDKQL---DFTY 415
Query: 60 -LAREMCDAVGGVNQEPYHYGSHYSN 84
+ R+ A G + EP H H S+
Sbjct: 416 EMTRQAFVAGGAGSGEPPHVPHHISD 441
>sp|P35045|TRYA_MANSE Trypsin, alkaline A OS=Manduca sexta PE=2 SV=1
Length = 256
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 54 VNNYNYLAREMCDAVGGVNQEPYHYGSHYSNSGTVLHFL--VRIPP 97
+NN N L C VN+ GS Y+NSG +H L VRI P
Sbjct: 60 LNNRNVLTAAHCPHGDAVNRWRVRSGSTYANSGGAVHNLNRVRIHP 105
>sp|P0CA41|VF134_ASFM2 Uncharacterized protein G1340L OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-097 PE=3 SV=1
Length = 1340
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 15 LPFILSDYKSATLDLTDPKSFRN-----LKKPMAVQDKKNESHYVNN-YNYLAREMCDAV 68
LP L ATL + DP+ L++P QDK N++ Y+N+ Y +L E D +
Sbjct: 1096 LPATLEKLPIATLTM-DPRDIDQAILYPLEEPYPQQDKANKAFYINHLYKFLLIEFFDVL 1154
Query: 69 GGVN 72
G+
Sbjct: 1155 YGLQ 1158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,117,120
Number of Sequences: 539616
Number of extensions: 1408467
Number of successful extensions: 3053
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2993
Number of HSP's gapped (non-prelim): 43
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)