BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10794
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QZE7|TSNAX_MOUSE Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1
Length = 290
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 165/274 (60%), Gaps = 20/274 (7%)
Query: 5 GFRDRRRKDQSSTNVNIGGKKNLIDENSPVVQEFRKYAIIMNTKQDKYERLVKISRDITI 64
GFR +R+ D N GK + +SPV+ F+ + ++ + DKYERLVK+SRDIT+
Sbjct: 9 GFR-KRKHDTFPHNQRREGKDASL--SSPVMLAFKSFQQELDARHDKYERLVKLSRDITV 65
Query: 65 ESKRVIFLLHTLLRS-DTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQYIRAFSAGL 123
ESKR IFLLH + + D +++L E+ES+L+ + Q + + EL GED++Q+ RA + GL
Sbjct: 66 ESKRTIFLLHRITSAPDMEEILTESESKLDGVRQKILQ-VAQELSGEDMHQFHRAVTTGL 124
Query: 124 QEFIEAYTFLHYLKSNHLIGWDHVEQKM--------EELCGPEAEESQVKL------LTP 169
QE++EA +F H++K+ LI + + +++ +E P AE + +L LTP
Sbjct: 125 QEYVEAVSFQHFIKTRSLISMEEINKQLTFTAEDSGKESKTPPAEGQEKQLVTWRLKLTP 184
Query: 170 TEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSRVKEASRKL 229
+++LGV DL+GELMR I SV G D + +R +Y G + E S+KL
Sbjct: 185 VDYLLGVADLTGELMRMCINSVGNG-DIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKL 243
Query: 230 AVLKQSLQKMERTVYTVKVRGSEMPRHVIAHVVN 263
LKQSL K+E Y +KVRGSE+P+H++A V +
Sbjct: 244 YTLKQSLAKVENACYALKVRGSEIPKHMLADVFS 277
>sp|Q5RC21|TSNAX_PONAB Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1
Length = 290
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 167/282 (59%), Gaps = 24/282 (8%)
Query: 1 MSNR----GFRDRRRKDQSSTNVNIGGKKNLIDENSPVVQEFRKYAIIMNTKQDKYERLV 56
MSN+ GFR +R+ D N GK ++ +SPV+ F+ + ++ + DKYERLV
Sbjct: 1 MSNKEGSGGFR-KRKHDNFPHNQRREGKD--VNSSSPVMLAFKSFQQELDARHDKYERLV 57
Query: 57 KISRDITIESKRVIFLLHTLLRS-DTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQY 115
K+SRDIT+ESKR IFLLH + + D + +L E+E +L+ + Q F+ + EL GED++Q+
Sbjct: 58 KLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQ-VAQELSGEDMHQF 116
Query: 116 IRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKM----------EELCGPEAEESQVK 165
RA + GLQE++EA +F H++K+ LI D + +++ + +A++ Q
Sbjct: 117 HRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTEDNGKENKTPSSDAQDKQFG 176
Query: 166 L----LTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSR 221
+TP +++LGV DL+GELMR I SV G D + +R +Y G +
Sbjct: 177 TWRLRVTPVDYLLGVADLTGELMRMCINSVGNG-DIDTPFEVSQFLRQVYDGFSFIGNTG 235
Query: 222 VKEASRKLAVLKQSLQKMERTVYTVKVRGSEMPRHVIAHVVN 263
E S+KL LKQSL K+E Y +KVRGSE+P+H++A V +
Sbjct: 236 PYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFS 277
>sp|Q99598|TSNAX_HUMAN Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1
Length = 290
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 167/282 (59%), Gaps = 24/282 (8%)
Query: 1 MSNR----GFRDRRRKDQSSTNVNIGGKKNLIDENSPVVQEFRKYAIIMNTKQDKYERLV 56
MSN+ GFR +R+ D N GK ++ +SPV+ F+ + ++ + DKYERLV
Sbjct: 1 MSNKEGSGGFR-KRKHDNFPHNQRREGKD--VNSSSPVMLAFKSFQQELDARHDKYERLV 57
Query: 57 KISRDITIESKRVIFLLHTLLRS-DTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQY 115
K+SRDIT+ESKR IFLLH + + D + +L E+E +L+ + Q F+ + EL GED++Q+
Sbjct: 58 KLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQ-VAQELSGEDMHQF 116
Query: 116 IRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKM----------EELCGPEAEESQVK 165
RA + GLQE++EA +F H++K+ LI D + +++ + +A++ Q
Sbjct: 117 HRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTEDNGKENKTPSSDAQDKQFG 176
Query: 166 L----LTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSR 221
+TP +++LGV DL+GELMR I SV G D + +R +Y G +
Sbjct: 177 TWRLRVTPVDYLLGVADLTGELMRMCINSVGNG-DIDTPFEVSQFLRQVYDGFSFIGNTG 235
Query: 222 VKEASRKLAVLKQSLQKMERTVYTVKVRGSEMPRHVIAHVVN 263
E S+KL LKQSL K+E Y +KVRGSE+P+H++A V +
Sbjct: 236 PYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFS 277
>sp|Q9JHB5|TSNAX_RAT Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1
SV=1
Length = 290
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 164/274 (59%), Gaps = 20/274 (7%)
Query: 5 GFRDRRRKDQSSTNVNIGGKKNLIDENSPVVQEFRKYAIIMNTKQDKYERLVKISRDITI 64
GFR +R+ D N GK +SPV+ F+ + ++T+ DKYERLVK+SRDIT+
Sbjct: 9 GFR-KRKHDNFPHNQRREGKD--ASSSSPVMLAFKSFQQELDTRHDKYERLVKLSRDITV 65
Query: 65 ESKRVIFLLHTLLRS-DTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQYIRAFSAGL 123
ESKR IFLLH + + D +++L E+ES+L+ + Q + + EL GED++Q+ RA + GL
Sbjct: 66 ESKRTIFLLHRITSAPDMEEILTESESKLDGVRQKMLQ-VAQELSGEDMHQFHRAVTTGL 124
Query: 124 QEFIEAYTFLHYLKSNHLIGWDHVEQKM--------EELCGPEAEESQVKL------LTP 169
QE++EA +F H++++ LI + + +++ +E P A+ +L +TP
Sbjct: 125 QEYVEAVSFQHFIRTRSLISMEEINRQLTFTTDDSGKESKAPPADGQDKQLVTWRLKITP 184
Query: 170 TEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSRVKEASRKL 229
+++LGV DL+GELMR I SV G D + +R +Y G + E S+KL
Sbjct: 185 VDYLLGVADLTGELMRMCINSVGNG-DIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKL 243
Query: 230 AVLKQSLQKMERTVYTVKVRGSEMPRHVIAHVVN 263
LKQSL K+E Y +KVRGSE+P+H++A V +
Sbjct: 244 YTLKQSLSKVENACYALKVRGSEIPKHMLADVFS 277
>sp|Q4R599|TSNAX_MACFA Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2
SV=1
Length = 290
Score = 180 bits (457), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 166/280 (59%), Gaps = 24/280 (8%)
Query: 1 MSNR----GFRDRRRKDQSSTNVNIGGKKNLIDENSPVVQEFRKYAIIMNTKQDKYERLV 56
MSN+ GFR +R+ D N GK ++ +SPV+ F+ + ++ + DKYERLV
Sbjct: 1 MSNKEGSGGFR-KRKHDNFPHNQRREGKD--VNSSSPVMLAFKSFQQELDARHDKYERLV 57
Query: 57 KISRDITIESKRVIFLLHTLLRS-DTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQY 115
K+SRDIT+ESKR IFLLH + + D + +L E+E +L+ + Q F+ + EL GED++Q+
Sbjct: 58 KLSRDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQ-VAQELSGEDMHQF 116
Query: 116 IRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKM--------EELCGPEAEESQVKL- 166
RA + GLQE++EA +F H++K+ LI D + +++ +E P ++ +
Sbjct: 117 HRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTDDNGKENKTPSSDTQDEQFG 176
Query: 167 -----LTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSR 221
+TP +++LGV DL+GELMR I SV G D + +R +Y G +
Sbjct: 177 TWRLRVTPVDYLLGVADLTGELMRMCINSVGNG-DIDTPFEVSQFLRQVYDGFSFIGNTG 235
Query: 222 VKEASRKLAVLKQSLQKMERTVYTVKVRGSEMPRHVIAHV 261
E S+KL LKQSL K+E Y +KVRGSE+P+H++A V
Sbjct: 236 PYEVSKKLYTLKQSLAKVENACYALKVRGSEIPKHMLADV 275
>sp|O74955|TSNAX_SCHPO Translin-associated protein X homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC736.09c PE=3 SV=1
Length = 231
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 120/223 (53%), Gaps = 22/223 (9%)
Query: 36 QEFRKYAIIMNTKQDKYERLVKISRDITIESKRVIFLLHTLLRSDTQKVLEEAESRLNIL 95
+EF + + QDK E+++++SR+ITI+SKR+IFLLH SD + ++ + R +I
Sbjct: 3 EEFLSFKNFLQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFD-RTSIF 61
Query: 96 ---MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKME 152
+ +S+K EL G + ++ A + GLQE++EA TF +L++ L+
Sbjct: 62 EKKIHKELESLKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLS--------- 112
Query: 153 ELCGPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLY- 211
C + + + ++VLGV D++GE+MR+ + + + S +R L+
Sbjct: 113 --CKDSSFRISINFI---DYVLGVCDMTGEIMRFLVTNGSKFS-VQQLTQQVKFLRGLHK 166
Query: 212 -VAMLASGVSRVK-EASRKLAVLKQSLQKMERTVYTVKVRGSE 252
+ + S+VK E +KL+V++ S+ K+E Y+ +R ++
Sbjct: 167 NCSEIEHLPSKVKSELQQKLSVMENSISKVEGICYSKILREAD 209
>sp|Q08DM8|TSN_BOVIN Translin OS=Bos taurus GN=TSN PE=2 SV=1
Length = 228
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++TH S+K + E Y++ + LQ + F+ YL+S L+ + + E+
Sbjct: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLESETLV----TREAVTEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G E + + L +++ GV L+ EL R ++ SV AG S +T ++ L
Sbjct: 124 GIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHIST------FINEL 177
Query: 216 ASGVS--RVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>sp|P97891|TSN_CRIGR Translin OS=Cricetulus griseus GN=TSN PE=2 SV=1
Length = 228
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++TH S+K + E Y++ + LQ + F+ YL++ L+ + + E+
Sbjct: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLV----TREAVTEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G E + + L +++ GV L+ EL R ++ SV AG S +T ++ L
Sbjct: 124 GIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHIST------FINEL 177
Query: 216 ASGVS--RVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>sp|Q62348|TSN_MOUSE Translin OS=Mus musculus GN=Tsn PE=1 SV=1
Length = 228
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++TH S+K + E Y++ + LQ + F+ YL++ L+ + + E+
Sbjct: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLV----TREAVTEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G E + + L +++ GV L+ EL R ++ SV AG S +T ++ L
Sbjct: 124 GIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHIST------FINEL 177
Query: 216 ASGVS--RVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>sp|Q15631|TSN_HUMAN Translin OS=Homo sapiens GN=TSN PE=1 SV=1
Length = 228
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++TH S+K + E Y++ + LQ + F+ YL++ L+ + + E+
Sbjct: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLV----TREAVTEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G E + + L +++ GV L+ EL R ++ SV AG S +T ++ L
Sbjct: 124 GIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHIST------FINEL 177
Query: 216 ASG--VSRVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG + +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>sp|P79769|TSN_CHICK Translin OS=Gallus gallus GN=TSN PE=1 SV=1
Length = 229
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++T +S+K + + Y++ + LQ + +F+ YL++ L+ + + E+
Sbjct: 68 VRTQMESLKTKFPADQYYRFHEHWRFVLQRLVFLASFVVYLETETLV----TREAVAEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G EA+ + L +++ GV L+ EL R A+ SV AG S +T ++ L
Sbjct: 124 GIEADRERGFHLDIEDYLSGVLTLASELARLAVNSVTAGDYSRPLRIST------FINEL 177
Query: 216 ASGVS--RVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKIEEVVYDLSIRG 216
>sp|Q5R7P2|TSN_PONAB Translin OS=Pongo abelii GN=TSN PE=2 SV=1
Length = 228
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 96 MQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELC 155
++TH S+K + E Y++ + LQ + F+ YL++ L+ + + E+
Sbjct: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLV----TREAVTEIL 123
Query: 156 GPEAEESQVKLLTPTEFVLGVGDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAML 215
G E + + L +++ GV L+ EL R ++ SV AG S +T ++ L
Sbjct: 124 GMEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHIST------FINEL 177
Query: 216 ASGVS--RVKEAS--RKLAVLKQSLQKMERTVYTVKVRG 250
SG +K S ++ LK ++K+E VY + +RG
Sbjct: 178 DSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
>sp|Q57118|NIFK_FRAAL Nitrogenase molybdenum-iron protein beta chain OS=Frankia alni
GN=nifK PE=3 SV=1
Length = 528
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 105 AELVGEDLYQYIRAF---SAGLQEFIEAYTFLHYLKSNHLIGWDHVEQKMEELCG--PEA 159
AE++GEDL+ YI A A Q+F +Y +H+ G+D + + + E+ P+A
Sbjct: 161 AEVIGEDLFAYIGAAREQEAITQDFPVSYAHTPCFVGSHITGYDVMLKGILEMLAKSPDA 220
Query: 160 EESQV 164
+ S+V
Sbjct: 221 DASKV 225
>sp|Q9PK60|UVRA_CHLMU UvrABC system protein A OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=uvrA PE=3 SV=1
Length = 1787
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 17 TNVNIGGKKNLIDEN-SPVVQEFRKYAIIMNTK-QDKYERLVKISRDITIESKRVIFLLH 74
T V+ GK +LI++ P V+EF + N Q K RLV I+RD+ S+R I L +
Sbjct: 624 TGVSGSGKSSLINDTLVPCVEEFIEQGSCPNLAVQGKLSRLVHINRDLPGRSQRSISLTY 683
Query: 75 TLLRSDTQKVL-EEAESRLNILMQTHF 100
+ +++ E+ + L ++HF
Sbjct: 684 IKAFDELRQLFAEQPRCKPLGLTKSHF 710
>sp|A4VM41|PYRD_PSEU5 Dihydroorotate dehydrogenase (quinone) OS=Pseudomonas stutzeri
(strain A1501) GN=pyrD PE=3 SV=1
Length = 343
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 19/159 (11%)
Query: 77 LRSDTQKVLEEAESRLNILMQTHFKSIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYL 136
LR + +++ L I + + LVGE ++Q AG+ I T L
Sbjct: 198 LRREDLEIMHGKRVPLAIKIAPDMTDEETALVGEAVFQ------AGMDAIIATNT---TL 248
Query: 137 KSNHLIGWDHVEQKMEELCGPEAEESQ--VKLLTPTEFVLGVGDLSGELMRYAIGSVAAG 194
+ G H ++ P ++S VK+L T L G L A+G + G
Sbjct: 249 GREGVAGLAHADEAGGLSGAPVRDKSTHTVKVLAQT--------LGGRLPIIAVGGITEG 300
Query: 195 SDSTDCINATNTVRDLYVAMLASGVSRVKEASRKLAVLK 233
+ + I A ++ LY + G + ++EA +A L+
Sbjct: 301 RHAAEKIEAGASLVQLYSGFIYKGPALIREAVDAIAALR 339
>sp|O94294|SOG2_SCHPO Leucine-rich repeat-containing protein sog2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sog2 PE=1 SV=1
Length = 886
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 44 IMNTKQDKYERLVKISRDITIESKRVIFLLHTLLRSDTQKVLEEAESRLNILMQTH--FK 101
+ +TK + ER++K + D E+ + L H LR + LE + R+ L H K
Sbjct: 6 VSSTKNSEIERIIKEAEDAGPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIK 65
Query: 102 SIKAELVGEDLYQYIRAFSAGLQEFIEAYTFLHYLK 137
SI E++ +Y+ S L+EF E+ L L+
Sbjct: 66 SIGPEILKFTRLRYLNIRSNVLREFPESLCRLESLE 101
>sp|C1DDY1|PYRD_AZOVD Dihydroorotate dehydrogenase (quinone) OS=Azotobacter vinelandii
(strain DJ / ATCC BAA-1303) GN=pyrD PE=3 SV=1
Length = 347
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 177 GDLSGELMRYAIGSVAAGSDSTDCINATNTVRDLYVAMLASGVSRVKEASRKLAVLKQSL 236
G+L G L A+G + G + + I A ++ +Y + G + ++EA +A L+
Sbjct: 283 GELGGRLPIVAVGGITEGRHAAEKIAAGASLVQIYTGFVYKGPALIREAVEAIAALRG-- 340
Query: 237 QKMERTVYT 245
ER V T
Sbjct: 341 ---ERPVGT 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,027,045
Number of Sequences: 539616
Number of extensions: 3497959
Number of successful extensions: 11646
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 11609
Number of HSP's gapped (non-prelim): 34
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)