BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10797
(517 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VRP9|BRE1_DROME E3 ubiquitin-protein ligase Bre1 OS=Drosophila melanogaster GN=Bre1
PE=1 SV=2
Length = 1044
Score = 278 bits (711), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 164/323 (50%), Positives = 191/323 (59%), Gaps = 81/323 (25%)
Query: 274 EFRKFACVVRDSKRDERKKLADEEAMRKIKQLEDQTHQLQKQVATHK------------- 320
E R+ +++SKR+ERKKLADEEA+RKIKQLE+Q ++LQKQ+A HK
Sbjct: 721 ELRQQLKKLQESKREERKKLADEEALRKIKQLEEQKYELQKQMANHKPTDNSWGSGAPGT 780
Query: 321 ----------QEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQ 370
EEEALLNEMEVTGQAFEDMQEQNSRL+QQLREKDDANFKLM+ERIK+NQ
Sbjct: 781 ANYTRPFVGSHEEEALLNEMEVTGQAFEDMQEQNSRLIQQLREKDDANFKLMSERIKANQ 840
Query: 371 LHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDL 430
LHKL REEK L +Q+ + QIEAMH +RKLEEKER LQ + + EKEL LR QAM++
Sbjct: 841 LHKLLREEKTVLEDQMATATTQIEAMHIVLRKLEEKERSLQATVASIEKELMLRQQAMEM 900
Query: 431 NKRKAIESAQSAADLKLHL------------VIIYTNGPARLEFGKDREFSAKFVNFRRK 478
+KRKAIESAQSAADLKLHL V+ E K + + F+RK
Sbjct: 901 HKRKAIESAQSAADLKLHLEKYHAQMKEAQQVVAEKTSSLEAEAYKTKRLQEELAQFKRK 960
Query: 479 SY--------------------------------------------FFVEFLDCLRTRYE 494
+ F V DCLRTRYE
Sbjct: 961 AERMKKMEMSGTTIDEVMIEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYE 1020
Query: 495 TRQRKCPKCNAK--ANDYHRLYL 515
TRQRKCPKCN ANDYHRLYL
Sbjct: 1021 TRQRKCPKCNCAFGANDYHRLYL 1043
>sp|Q8CJB9|BRE1B_RAT E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40 PE=1
SV=1
Length = 1002
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 180/294 (61%), Gaps = 60/294 (20%)
Query: 282 VRD-SKRDER--KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFE 338
+RD +RD R KK+ADE+A+R+I+Q E+Q LQ+++ KQEEEALL+EM+VTGQAFE
Sbjct: 708 IRDLEERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFE 767
Query: 339 DMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHT 398
DMQEQN RLLQQLREKDDANFKLM+ERIK+NQ+HKL REEKD L EQV L Q++A
Sbjct: 768 DMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLL 827
Query: 399 AIRKLEEKERFLQTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHLVIIYTN--- 455
++KLEEKER LQ L EKEL LR+QA++LNKRKA+E+AQ A DLK+ L + T
Sbjct: 828 TVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLRE 887
Query: 456 -GPA-------------------------RLEFGKDR-----------------EFSAKF 472
P R + K R E+ A+
Sbjct: 888 IQPCLAESRAAREKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARL 947
Query: 473 V----NFRRKSY-----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLYL 515
N R+K F V +C+R RYE RQRKCPKCNA A+D+HR+Y+
Sbjct: 948 TCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1001
>sp|Q5RAU7|BRE1B_PONAB E3 ubiquitin-protein ligase BRE1B OS=Pongo abelii GN=RNF40 PE=2 SV=1
Length = 1001
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 174/283 (61%), Gaps = 59/283 (20%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQ 350
KK+ADE+A+R+I+Q E+Q LQ+++ KQEEEALL+EM+VTGQAFEDMQEQN RLLQQ
Sbjct: 719 KKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQ 778
Query: 351 LREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFL 410
LREKDDANFKLM+ERIK+NQ+HKL REEKD L EQV L Q++A ++KLEEKER L
Sbjct: 779 LREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERAL 838
Query: 411 QTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHL--------------------- 449
Q L EKEL LR+QA++LNKRKA+E+AQ A DLK+ L
Sbjct: 839 QGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 450 --------------------------VIIYTNGPARLEFGKDREFSAKFV----NFRRKS 479
V +Y + L+ + +E+ A+ N R+K
Sbjct: 899 EKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQE-EIKEYKARLTCPCCNTRKKD 957
Query: 480 Y-----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLYL 515
F V +C+R RYE RQRKCPKCNA A+D+HR+Y+
Sbjct: 958 AVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>sp|Q3U319|BRE1B_MOUSE E3 ubiquitin-protein ligase BRE1B OS=Mus musculus GN=Rnf40 PE=2 SV=2
Length = 1001
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/282 (48%), Positives = 173/282 (61%), Gaps = 57/282 (20%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQ 350
KK+ADE+A+R+I+Q E+Q LQ+++ KQEEEALL+EM+VTGQAFEDMQEQN RLLQQ
Sbjct: 719 KKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQ 778
Query: 351 LREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFL 410
LREKDDANFKLM+ERIK+NQ+HKL REEKD L EQV L Q++A ++KLEEKER L
Sbjct: 779 LREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERAL 838
Query: 411 QTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHLVIIYTN----GPA-------- 458
Q L EKEL LR+QA++LNKRKA+E+AQ A DLK+ L + T P
Sbjct: 839 QGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 459 -----------------RLEFGKDR-----------------EFSAKFV----NFRRKSY 480
R + K R E+ A+ N R+K
Sbjct: 899 EKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDA 958
Query: 481 -----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLYL 515
F V +C+R RYE RQRKCPKCNA A+D+HR+Y+
Sbjct: 959 VLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>sp|O75150|BRE1B_HUMAN E3 ubiquitin-protein ligase BRE1B OS=Homo sapiens GN=RNF40 PE=1 SV=4
Length = 1001
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 174/283 (61%), Gaps = 59/283 (20%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQ 350
KK+ADE+A+R+I+Q E+Q LQ+++ KQEEEALL+EM+VTGQAFEDMQEQN RLLQQ
Sbjct: 719 KKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQ 778
Query: 351 LREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFL 410
LREKDDANFKLM+ERIK+NQ+HKL REEKD L EQV L Q++A ++KLEEKER L
Sbjct: 779 LREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERAL 838
Query: 411 QTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHL--------------------- 449
Q L EKEL LR+QA++LNKRKA+E+AQ A DLK+ L
Sbjct: 839 QGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 450 --------------------------VIIYTNGPARLEFGKDREFSAKFV----NFRRKS 479
V +Y + L+ + +E+ A+ N R+K
Sbjct: 899 EKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQE-EIKEYKARLTCPCCNTRKKD 957
Query: 480 Y-----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLYL 515
F V +C+R RYE RQRKCPKCNA A+D+HR+Y+
Sbjct: 958 AVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>sp|Q4R7K7|BRE1B_MACFA E3 ubiquitin-protein ligase BRE1B OS=Macaca fascicularis GN=RNF40
PE=2 SV=1
Length = 1001
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 173/283 (61%), Gaps = 59/283 (20%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQ 350
KK+AD +A+R+I+Q E+Q LQ+++ KQEEEALL+EM+VTGQAFEDMQEQN RLLQQ
Sbjct: 719 KKIADGDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQ 778
Query: 351 LREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFL 410
LREKDDANFKLM+ERIK+NQ+HKL REEKD L EQV L Q++A ++KLEEKER L
Sbjct: 779 LREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERAL 838
Query: 411 QTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHL--------------------- 449
Q L EKEL LR+QA++LNKRKA+E+AQ A DLK+ L
Sbjct: 839 QGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAR 898
Query: 450 --------------------------VIIYTNGPARLEFGKDREFSAKFV----NFRRKS 479
V +Y + L+ + +E+ A+ N R+K
Sbjct: 899 EKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQE-EIKEYKARLTCPCCNTRKKD 957
Query: 480 Y-----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLYL 515
F V +C+R RYE RQRKCPKCNA A+D+HR+Y+
Sbjct: 958 AVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>sp|Q5DTM8|BRE1A_MOUSE E3 ubiquitin-protein ligase BRE1A OS=Mus musculus GN=Rnf20 PE=1
SV=2
Length = 973
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 174/281 (61%), Gaps = 57/281 (20%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLR 352
+ADE+A+RKI+ +E+Q LQK++A KQEEEALL+EM+VTGQAFEDMQEQN RL+QQLR
Sbjct: 693 MADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLR 752
Query: 353 EKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQT 412
EKDDANFKLM+ERIKSNQ+HKL +EEK+ L +QV L Q++A +RKLEEKE LQ+
Sbjct: 753 EKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQS 812
Query: 413 VLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHLVI-----------IYTNGPA--- 458
+ EKEL LR QA+++NKRKA+E+AQ A DLK L + I N
Sbjct: 813 NIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEK 872
Query: 459 -----------------RLEFGKD---------------REFSAKFV----NFRRKSY-- 480
+LE K +++ A+ N R+K
Sbjct: 873 DLFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVL 932
Query: 481 ---FFVEFLDCLRTRYETRQRKCPKCNAK--ANDYHRLYLG 516
F V +C++TRY+TRQRKCPKCNA AND+HR+Y+G
Sbjct: 933 TKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG 973
>sp|Q5VTR2|BRE1A_HUMAN E3 ubiquitin-protein ligase BRE1A OS=Homo sapiens GN=RNF20 PE=1
SV=2
Length = 975
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 174/281 (61%), Gaps = 57/281 (20%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLR 352
+ADE+A+RKI+ +E+Q LQK++A KQEEEALL+EM+VTGQAFEDMQEQN RL+QQLR
Sbjct: 695 MADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLR 754
Query: 353 EKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQT 412
EKDDANFKLM+ERIKSNQ+HKL +EEK+ L +QV L Q++A +RKLEEKE LQ+
Sbjct: 755 EKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQS 814
Query: 413 VLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHLVI-----------IYTNGPA--- 458
+ EKEL LR QA+++NKRKA+E+AQ A DLK L + I N
Sbjct: 815 NIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEK 874
Query: 459 -----------------RLEFGKD---------------REFSAKFV----NFRRKSY-- 480
+LE K +++ A+ N R+K
Sbjct: 875 DMFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVL 934
Query: 481 ---FFVEFLDCLRTRYETRQRKCPKCNAK--ANDYHRLYLG 516
F V +C++TRY+TRQRKCPKCNA AND+HR+Y+G
Sbjct: 935 TKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG 975
>sp|A2VDP1|BRE1A_BOVIN E3 ubiquitin-protein ligase BRE1A OS=Bos taurus GN=RNF20 PE=2 SV=1
Length = 975
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 174/281 (61%), Gaps = 57/281 (20%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLR 352
+ADE+A+RKI+ +E+Q LQK++A KQEEEALL+EM+VTGQAFEDMQEQN RL+QQLR
Sbjct: 695 MADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLR 754
Query: 353 EKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQT 412
EKDDANFKLM+ERIKSNQ+HKL +EEK+ L +QV L Q++A +RKLEEKE LQ+
Sbjct: 755 EKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQS 814
Query: 413 VLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHLVI-----------IYTNGPA--- 458
+ EKEL LR QA+++NKRKA+E+AQ A DLK L + I N
Sbjct: 815 NIGTGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLEMAQKKLHDFQDEIVENSVTKEK 874
Query: 459 -----------------RLEFGKD---------------REFSAKFV----NFRRKSY-- 480
+LE K +++ A+ N R+K
Sbjct: 875 DMFNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVL 934
Query: 481 ---FFVEFLDCLRTRYETRQRKCPKCNAK--ANDYHRLYLG 516
F V +C++TRY+TRQRKCPKCNA AND+HR+Y+G
Sbjct: 935 TKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG 975
>sp|Q5ZLS3|BRE1A_CHICK E3 ubiquitin-protein ligase BRE1A OS=Gallus gallus GN=RNF20 PE=2
SV=1
Length = 984
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 127/157 (80%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLR 352
+ADE+A+RKI+ +E+Q LQK++A KQEEEALL+EM+VTGQAFEDMQEQN RL+QQLR
Sbjct: 704 MADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLR 763
Query: 353 EKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQT 412
EKDDANFKLM+ERIKSNQ+HKL +EEK+ L +QV L Q++A +RKLEEKE LQ+
Sbjct: 764 EKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQS 823
Query: 413 VLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHL 449
+ EKEL LR QA+++NKRKA+++AQ A DLK L
Sbjct: 824 SIGTGEKELGLRTQALEMNKRKAMDAAQLADDLKTQL 860
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 7/50 (14%)
Query: 474 NFRRKSY-----FFVEFLDCLRTRYETRQRKCPKCNAK--ANDYHRLYLG 516
N R+K F V +C++TRY+TRQRKCPKCNA AND+HR+Y+G
Sbjct: 935 NMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG 984
>sp|Q9C895|BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana
GN=HUB2 PE=1 SV=2
Length = 900
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 311 QLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQ 370
+L++ + +QE EA + EME GQA+EDMQ QN LLQQ+ E+DD N KL++E +K+
Sbjct: 640 ELKEGIKVKEQEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKTKH 699
Query: 371 LHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEK 406
+ EK + +Q+ ++ +E I EE+
Sbjct: 700 AYNTHLSEKQVMEKQLHQVNASVENFKARIAHNEEQ 735
>sp|Q86KL1|BRE1_DICDI Probable E3 ubiquitin-protein ligase bre1 OS=Dictyostelium
discoideum GN=bre1 PE=3 SV=1
Length = 1080
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 75/122 (61%)
Query: 301 KIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFK 360
+IK+L+ Q + Q + KQE EAL+ E++ G+A+E M EQN+RL +QL +K+D +
Sbjct: 797 QIKELDITISQNKIQQESQKQELEALVMEIDSMGKAYEQMLEQNTRLTKQLSDKEDTHAH 856
Query: 361 LMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKE 420
LM E IKS Q + ++E + + E++ ++++ ++K+EEK LQ L+ ++
Sbjct: 857 LMAENIKSQQTIRNSKEIQLAIEEKLNRNEEKLKSQGELMQKIEEKSNILQKQLSKVTED 916
Query: 421 LH 422
LH
Sbjct: 917 LH 918
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 474 NFRRKSY-----FFVEFLDCLRTRYETRQRKCPKCNA--KANDYHRLY 514
N R+K+Y F V +C+ + +TR+R+CP CN D H++Y
Sbjct: 1032 NDRQKNYVIAKCFHVFCKECIYSNIDTRKRRCPSCNRAFAETDVHQIY 1079
>sp|Q336R3|BRE1B_ORYSJ E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
japonica GN=BRE1B PE=2 SV=1
Length = 844
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 63/106 (59%)
Query: 301 KIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFK 360
K+ E +L++ + + E + ++E+E GQA+EDMQ QN LLQQ+ ++DD N K
Sbjct: 574 KVDASERDVMKLKESIRIKEAEVDGHISEIETIGQAYEDMQTQNQHLLQQVADRDDFNIK 633
Query: 361 LMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEK 406
L+++ +K Q + EK+ L++Q+Q ++ +E+ I EE+
Sbjct: 634 LVSDSVKMKQAYGSLLAEKNMLQKQLQHVNSSLESSKLKITSGEEQ 679
>sp|A2ZAC2|BRE1B_ORYSI E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp.
indica GN=BRE1B PE=3 SV=2
Length = 844
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 63/106 (59%)
Query: 301 KIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFK 360
K+ E +L++ + + E + ++E+E GQA+EDMQ QN LLQQ+ ++DD N K
Sbjct: 574 KVDASERDVMKLKESIRIKEAEVDGHISEIETIGQAYEDMQTQNQHLLQQVADRDDFNIK 633
Query: 361 LMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEK 406
L+++ +K Q + EK+ L++Q+Q ++ +E+ I EE+
Sbjct: 634 LVSDSVKMKQAYGSLLAEKNMLQKQLQHVNSSLESSKLKITSGEEQ 679
>sp|P34537|BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis elegans
GN=rfp-1 PE=1 SV=2
Length = 837
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 289 ERKKLADEEAMRKIKQLEDQTHQLQKQVATHKQE--------------EEALLNEMEVTG 334
E K+L E K KQ+E+ ++ +Q+A E EE + +E+E G
Sbjct: 538 EVKRLGAMEKQEKQKQVENLQKEVNRQIADKLSELETLRKTNEMLTNDEECISDELEAIG 597
Query: 335 QAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIE 394
A E+ QE+N++L + RE++D N K+M +R+ NQ RE+ L + Q QI
Sbjct: 598 TAVEEEQERNAQLYIEKREQEDRNLKMMNDRMIQNQTFNRLREKLSCLESKAQT-DAQIA 656
Query: 395 AMHTAIRKLEEK 406
MH +K E+
Sbjct: 657 KMHEFEKKANEE 668
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
Query: 488 CLRTRYETRQRKCPKCNAK--ANDYHRLYL 515
C++T Y+TRQRKCPKCN+ AND+HR+++
Sbjct: 808 CIKTMYDTRQRKCPKCNSNFGANDFHRIFI 837
>sp|Q60YN5|BRE1_CAEBR E3 ubiquitin-protein ligase bre-1 OS=Caenorhabditis briggsae
GN=rfp-1 PE=3 SV=1
Length = 828
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
Query: 488 CLRTRYETRQRKCPKCNAK--ANDYHRLYL 515
C++T Y+TRQRKCPKCN+ AND+HR+++
Sbjct: 799 CIKTMYDTRQRKCPKCNSNFGANDFHRIFI 828
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 270 YGSL--EFRKFACVVRDSKRDERKKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALL 327
Y SL E R+ + + E+++ D E R I + L+K +E+ L
Sbjct: 528 YESLKREIRRIGAM----DKQEKQRQLDREIQRHIADKVTELETLRKTNEALTNDEQTLS 583
Query: 328 NEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQ 387
+E+EV E+ QE+N++L + R+++D N K+M ER+ NQ+ RE+ + L + Q
Sbjct: 584 DELEVVCLTIEEEQERNAQLFMEKRDQEDRNLKMMNERMIQNQVQSRMREKLECLESKAQ 643
Query: 388 ALSLQIEAMH 397
QI MH
Sbjct: 644 T-DAQIAKMH 652
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 286 KRDERKKLADE--EAMRKIKQLEDQTHQ-LQKQVATHKQEEEALLNEMEVTGQAFEDMQE 342
KR E+++L E E ++K ++L+ Q + LQK+ A +QE+E L E E+ Q E ++
Sbjct: 2754 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLER 2813
Query: 343 QNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRK 402
+ LQ+ E +K + +L +EE L+ Q Q + E + K
Sbjct: 2814 EKQEQLQK------------EEELKRQEQERLQKEE--ALKRQEQERLQKEEEL-----K 2854
Query: 403 LEEKERFLQTVLTNAEKELHLRNQ 426
+E+ER + + AE+E H++++
Sbjct: 2855 RQEQERLERKKIELAEREQHIKSK 2878
Score = 37.0 bits (84), Expect = 0.36, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 308 QTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIK 367
+ +LQK+ +QE+E L E + Q E+++ Q LQ+ E +K
Sbjct: 2743 EQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQK------------EEALK 2790
Query: 368 SNQLHKLAREE-------KDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKE 420
+ +L +EE + RE+ + L + E +L+++E + +KE
Sbjct: 2791 RQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2850
Query: 421 LHLRNQAMDLNKRKAIESAQSAADLKLHL 449
L+ Q + +RK IE A+ +K L
Sbjct: 2851 EELKRQEQERLERKKIELAEREQHIKSKL 2879
Score = 36.2 bits (82), Expect = 0.57, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 286 KRDERKKLADE--EAMRKIKQLEDQTHQ-LQKQVATHKQEEEALLNEMEVTGQAFEDMQE 342
KR E+++L E E ++K ++L+ Q + LQK+ A +QE+E L E E+ Q E ++
Sbjct: 2804 KRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLER 2863
Query: 343 QNSRLL---QQLREKDDANF---------KLMTERIKSNQLHKLAREEKDTLREQVQALS 390
+ L Q ++ K +++ K E IK+ + E+ L+ LS
Sbjct: 2864 KKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKLRHSLEQKWLKHLQNILS 2923
Query: 391 LQIEA-MHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDLNK 432
L+I++ ++ +++ E L+T + N+ K N +LN+
Sbjct: 2924 LKIDSLLNKNDEVIKDNETQLKTNILNSLKNQLYLNLKRELNE 2966
>sp|Q8RXD6|BRE1A_ARATH E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana
GN=HUB1 PE=1 SV=1
Length = 878
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATH------KQEEEAL-LNEMEVTGQAFEDMQEQNS 345
LA EA +I L + ++ VA H K EE L+E++ G A+ED+ QN
Sbjct: 594 LAAAEA--EIADLRQKMDDCKRDVAKHSDILKSKHEEHGTYLSEIQTIGSAYEDIVPQNQ 651
Query: 346 RLLQQLREKDDANFKLMTERIKSNQLH 372
+LL Q+ E+DD N KL E I S Q+
Sbjct: 652 QLLLQVTERDDYNIKLFLEGITSRQMQ 678
>sp|Q9P219|DAPLE_HUMAN Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3
Length = 2028
Score = 42.4 bits (98), Expect = 0.010, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 297 EAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDD 356
EA K+ QLE + QL + + K++ E E + + +QE+N RL +++ +
Sbjct: 601 EANGKLSQLEFEKRQLHRDLEQAKEKGE----RAEKLERELQRLQEENGRLARKVTSLET 656
Query: 357 ANFKLMTERIKSNQL---HKLAREEKDTLRE---QVQAL---SLQIEAMHTAIRKLEEKE 407
A K+ +S L ++ R+ DTL+ Q++ L + Q++A + +R+L E
Sbjct: 657 ATEKVEALEHESQGLQLENRTLRKSLDTLQNVSLQLEGLERDNKQLDAENLELRRLVETM 716
Query: 408 RFLQTVLTNAEKELHLRNQAMDLNKRK 434
RF T L E+E NQ ++ K +
Sbjct: 717 RFTSTKLAQMERE----NQQLEREKEE 739
Score = 42.0 bits (97), Expect = 0.011, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 277 KFACVVRDSKRDERKKLADEEAMRKIKQLEDQTHQLQKQVATH--------------KQE 322
K + V ++S+ +++ +A K+K+LE L KQV H K +
Sbjct: 861 KLSAVEKESRALDKELARCRDAAGKLKELEKDNRDLTKQVTVHARTLTTLREDLVLEKLK 920
Query: 323 EEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTL 382
+ L +E++ Q E + LLQ+ D +K++ R +S LA +E
Sbjct: 921 SQQLSSELDKLSQELEKVGLNRELLLQEDDSGSDTKYKILEGRNESALKTTLAMKE---- 976
Query: 383 REQVQALSLQIEAMHTAIRKLEEKERFL----QTVLTNAEKELHLRN 425
E++ L Q+E + R+LE + + L +T+ N + HL+N
Sbjct: 977 -EKIVLLEAQMEEKASLNRQLESELQMLKKECETLRQNQGEGQHLQN 1022
Score = 37.4 bits (85), Expect = 0.29, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 14/161 (8%)
Query: 293 LADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLR 352
L EE+ K +LE + HQL K++ E L ++E Q+ +D++ + L +R
Sbjct: 487 LVLEESGLKCGELEKENHQLSKKI-------EKLQTQLEREKQSNQDLETLSEEL---IR 536
Query: 353 EKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTA-IRKLEEKERFLQ 411
EK+ + T + + K +EKD L + +L + + A ++ +E++ + L
Sbjct: 537 EKEQLQSDMETLKADKARQIKDLEQEKDHLNRAMWSLRERSQVSSEARMKDVEKENKALH 596
Query: 412 TVLTNAE---KELHLRNQAMDLNKRKAIESAQSAADLKLHL 449
+T A +L + + + +A E + A L+ L
Sbjct: 597 QTVTEANGKLSQLEFEKRQLHRDLEQAKEKGERAEKLEREL 637
Score = 34.3 bits (77), Expect = 2.7, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 289 ERKKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEME----------------- 331
ER+K ++++ ++L + QLQ + T K ++ + ++E
Sbjct: 518 EREKQSNQDLETLSEELIREKEQLQSDMETLKADKARQIKDLEQEKDHLNRAMWSLRERS 577
Query: 332 -VTGQA-FEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQAL 389
V+ +A +D++++N L Q + E AN KL + QLH+ + K+ E+ + L
Sbjct: 578 QVSSEARMKDVEKENKALHQTVTE---ANGKLSQLEFEKRQLHRDLEQAKEK-GERAEKL 633
Query: 390 SLQIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDLNKRKAIESAQSAADLKLHL 449
+++ + +L K L+T E H +Q + L R +S + ++ L L
Sbjct: 634 ERELQRLQEENGRLARKVTSLETATEKVEALEH-ESQGLQLENRTLRKSLDTLQNVSLQL 692
Score = 33.9 bits (76), Expect = 3.3, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 296 EEAMRKIKQLEDQTHQLQKQVATHKQ---EEEALLNEME-VTGQAFEDMQEQNS------ 345
EE +QLE + L+K+ T +Q E + L N + G+ Q + +
Sbjct: 987 EEKASLNRQLESELQMLKKECETLRQNQGEGQHLQNSFKHPAGKTAASHQGKEAWGPGHK 1046
Query: 346 -RLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLE 404
++ LR KD A I+ + + + EK L+EQ+Q L Q + I L+
Sbjct: 1047 EATMELLRVKDRA--------IELERNNAALQAEKQLLKEQLQHLETQNVTFSSQILTLQ 1098
Query: 405 EKERFLQTVLTNAEKELHLRNQAMDLNKRKAIESAQSAA 443
++ FLQ E L+ Q L + S+QSAA
Sbjct: 1099 KQSAFLQ------EHNTTLQTQTAKLQVENSTLSSQSAA 1131
>sp|Q60952|CP250_MOUSE Centrosome-associated protein CEP250 OS=Mus musculus GN=Cep250 PE=1
SV=4
Length = 2414
Score = 38.5 bits (88), Expect = 0.12, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 283 RDSKRDERKKL----ADEEAMRKIKQLEDQTHQLQKQVATHKQEE----------EALLN 328
RD RD+ +KL D EA + Q+ + LQ+Q++ ++E+ E+ L
Sbjct: 1251 RDDLRDQVQKLVQRLTDTEAQKS--QVHSELQDLQRQLSQSQEEKSKWEGRQNSLESELR 1308
Query: 329 EMEVTGQAFED---------MQEQNSR-LLQQLREKDDANFK-----------------L 361
++ T + + M+ QN R LLQ +EK A + +
Sbjct: 1309 DLHETAASLQSRLRQAELQKMEAQNDRELLQASKEKLSAQVEHLQACVAEAQAQADAAAV 1368
Query: 362 MTERIKSNQLH-KLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKE 420
+ E +++ + KL EE ++ RE+ QAL Q E + L+E L L+N E+E
Sbjct: 1369 LEEDLRTARSALKLKNEELESERERAQALQEQGELKVAQGKALQENLALLAQTLSNRERE 1428
Query: 421 LH-LRNQAMDLNKRKAIESA 439
+ L+ + +L K++ ++ A
Sbjct: 1429 VETLQAEVQELEKQREMQKA 1448
Score = 35.4 bits (80), Expect = 0.99, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 284 DSKRDERKKLADEEAMRKIK---------QLEDQTHQLQKQVATHKQEEEALLNEMEVTG 334
++ R E+++ D+E K+K Q + Q ++ H+++ L E+EV G
Sbjct: 1812 ETLRQEKQQTQDQEESMKLKTSALQAALEQAHATLKERQGELEEHREQVRRLQEELEVEG 1871
Query: 335 QAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKL-AREEKD-------TLREQV 386
+ ++E L + RE + A L + Q H+ AR +D TL EQ
Sbjct: 1872 RQVRALEEVLGDLRAESREHEKAVLALQQRCAEQAQEHEAEARTLQDSWLQAQATLTEQE 1931
Query: 387 QALSLQIEAMHTAIRKLEE----KERFLQTVLTNAEKELHLRNQAM 428
Q L+ + A + R+ EE + LQ L+ A+ L + Q++
Sbjct: 1932 QELA-ALRAENQYSRRQEEAAVSQAEALQEALSKAQAALQEKEQSL 1976
Score = 32.7 bits (73), Expect = 7.7, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 41/204 (20%)
Query: 280 CVVRDSKRDERKKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALL----------NE 329
C + +E ++ + E + Q + T LQ+++ K+E LL N
Sbjct: 2000 CQASARQLEEALRIREGEIQAQALQHHEVTQHLQQELCQKKEELRQLLEKAGARRSQENG 2059
Query: 330 MEVTGQAFEDMQEQNSRLLQQLREKD----DANFKLMTERIKSNQLHKLAREEKDTL--- 382
++ ++ QE+ RLL+ L+E +++ R S+ H+ EK L
Sbjct: 2060 IQEKQSLEQERQEETRRLLESLKELQLTVAQREEEILMLREASSPRHRALPAEKPALQPL 2119
Query: 383 -----------------------REQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEK 419
RE+ Q L+L + +I L+E FLQ + E
Sbjct: 2120 PAQQELERLQTALRQTEAREIEWREKAQDLALSLAQSKASISSLQEITMFLQASVLERES 2179
Query: 420 ELHLRNQAMDLNKRKAIESAQSAA 443
E + + L+ R+A+E QS
Sbjct: 2180 EQQRLQEELVLS-RQALEEQQSGG 2202
>sp|Q7XU27|BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp.
japonica GN=BRE1A PE=2 SV=3
Length = 884
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 320 KQEE-EALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREE 378
KQEE EA E+E GQA+ED+Q QN +LLQQ+ E+DD N K+ E +K+ Q E
Sbjct: 631 KQEECEAYRVEVECIGQAYEDIQAQNQQLLQQIIERDDDNTKIFMEGVKAKQTQDALHLE 690
Query: 379 KDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDLNKRKAIES 438
+LR +Q S ++ + I LE++ + + +++ ++ ++ +RK ++
Sbjct: 691 TYSLRRNLQQESSLMDLYNQKIVSLEDQLKMWSDRVGKLQEDGWQQSVSLSNYQRKLVDV 750
Query: 439 AQSAADLKLHLVIIYTN-GPARLEFG 463
+ A L L I N G +RLE
Sbjct: 751 HRDAQKLMQSLDGIQANVGSSRLEVA 776
>sp|A2XW69|BRE1A_ORYSI E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp.
indica GN=BRE1A PE=3 SV=2
Length = 884
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 320 KQEE-EALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREE 378
KQEE EA E+E GQA+ED+Q QN +LLQQ+ E+DD N K+ E +K+ Q E
Sbjct: 631 KQEECEAYRVEVECIGQAYEDIQAQNQQLLQQIIERDDDNTKIFMEGVKAKQTQDALHLE 690
Query: 379 KDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDLNKRKAIES 438
+LR +Q S ++ + I LE++ + + +++ ++ ++ +RK ++
Sbjct: 691 TYSLRRNLQQESSLMDLYNQKIVSLEDQLKMWSDRVGKLQEDGWQQSVSLSNYQRKLVDV 750
Query: 439 AQSAADLKLHLVIIYTN-GPARLEFG 463
+ A L L I N G +RLE
Sbjct: 751 HRDAQKLMQSLDGIQANVGSSRLEVA 776
>sp|O96133|YB145_PLAF7 Uncharacterized protein PFB0145c OS=Plasmodium falciparum (isolate
3D7) GN=PFB0145c PE=2 SV=1
Length = 1979
Score = 35.8 bits (81), Expect = 0.75, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEME-------VTGQAFEDMQEQ 343
+ ++ EE + I QL ++ Q+ HK+E L E++ + Q ++M +
Sbjct: 437 ENVSKEEINKLINQLNEKEKQILAFNKNHKEEIHGLKEELKESVKITKIETQELQEMVDI 496
Query: 344 NSRLLQQLREKDDA-----NFKLMTERIKSNQLHKLAREEKDTLREQVQALSL------- 391
+ L QL+EK +A + +L + + NQ EE + L E+++ +
Sbjct: 497 KQKELDQLQEKYNAQIESISIELSKKEKEYNQYKNTYIEEINNLNEKLEETNKEYTNLQN 556
Query: 392 ----QIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMD-LNKRKA 435
+I ++ I L + + T ++ + ++HL N+ +D LN K
Sbjct: 557 NYTNEINMLNNDIHMLNGNIKTMNTQISTLKNDVHLLNEQIDKLNNEKG 605
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 17/123 (13%)
Query: 301 KIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFK 360
+I L + H L + T + L N++ + + + + + L ++ E N +
Sbjct: 561 EINMLNNDIHMLNGNIKTMNTQISTLKNDVHLLNEQIDKLNNEKGTLNSKISE---LNVQ 617
Query: 361 LMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKE 420
+M +EEKD L Q+ LS QI+ + RK+EEKE + ++E
Sbjct: 618 IMD-----------LKEEKDFLNNQIVDLSNQIDLL---TRKMEEKENKMLEQENKYKQE 663
Query: 421 LHL 423
+ L
Sbjct: 664 MEL 666
>sp|Q15811|ITSN1_HUMAN Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3
Length = 1721
Score = 35.8 bits (81), Expect = 0.90, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 271 GSLEFRKFACVVRDSKRDERKKLAD-EEAMRKIKQLEDQTH----------QLQKQVATH 319
G+LE K + + +R E+++LA E A ++ K+ E Q QL+KQ
Sbjct: 361 GNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLEKQRELE 420
Query: 320 KQEEEALLNEMEVTGQAFEDMQEQNSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEK 379
+Q EE E+E A +++ Q +QL + + +L+ +R K +E+
Sbjct: 421 RQREEERRKEIERREAAKRELERQ-----RQLEWERNRRQELLNQRNKE-------QEDI 468
Query: 380 DTLREQVQALSLQIEAMHTAIRKLEEKERFLQTVLTNAEKELHLRNQAMDL 430
L+ + + L ++EA++ +LE K + ++ LT +E+ N++ +L
Sbjct: 469 VVLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSREL 519
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 291 KKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQ-------AFEDMQEQ 343
K++A+E A + L+ + L+ +V HK + E L +E+E G + ++EQ
Sbjct: 269 KEMAEERA----ESLQQEVDTLKDKVEEHKIDLEILKHEIEEKGSDGAASSYQVKQLEEQ 324
Query: 344 NSRLLQQLREKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKL 403
N+RL + L D + E IK + + E DTLR+Q + L + M I +L
Sbjct: 325 NARLKEALVRMRDLSASEKQEHIKVQKQMEKKNTELDTLRQQKEKLQEEASHMEKTIDEL 384
Query: 404 EEK-------ERFLQTVLTNAEKELHLRNQAMDL 430
+E+ E ++T+ AE+ L L + +L
Sbjct: 385 KEQVDAALGAEEMVETL---AERNLDLEEKVREL 415
>sp|O00471|EXOC5_HUMAN Exocyst complex component 5 OS=Homo sapiens GN=EXOC5 PE=1 SV=1
Length = 708
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 292 KLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQL 351
++ DE RK+++LE Q + K+ A QE L +V Q F+++ E S + ++
Sbjct: 54 QIMDERIQRKVEKLEQQCQKEAKEFAKKVQE---LQKSNQVAFQHFQELDEHISYVATKV 110
Query: 352 REKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQ 411
D + T R ++ + KL + + L ++++ + T K++E +Q
Sbjct: 111 CHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKS------DVFTNSEKIKEAADIIQ 164
Query: 412 TVLTNAEKELHLRNQAMDLNKRKAIES--AQSAADLKLHLVIIYTNGPARLEFGKDREFS 469
+LHL Q + ++ ++S A DL+ L+ +T+ R E + RE +
Sbjct: 165 --------KLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEISRMREVA 216
Query: 470 AKFVNFRRKSY 480
A ++F+ S+
Sbjct: 217 AVLLHFKGYSH 227
>sp|P33176|KINH_HUMAN Kinesin-1 heavy chain OS=Homo sapiens GN=KIF5B PE=1 SV=1
Length = 963
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 289 ERKKLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSR-L 347
E++ L + ++KQ +Q Q+Q TH+++ +L +E+E + D+Q+QN + +
Sbjct: 684 EKEHLNKVQTANEVKQAVEQ--QIQSHRETHQKQISSLRDEVEAKAKLITDLQDQNQKMM 741
Query: 348 LQQLREKDDANFKLMTERIKSNQLHKLA--REEKDTLREQVQAL----SLQIEAMHTAIR 401
L+Q R + + T++ KS +LH+L ++ ++ R+ ++ L + +++ +H +R
Sbjct: 742 LEQERLRVEHEKLKATDQEKSRKLHELTVMQDRREQARQDLKGLEETVAKELQTLHN-LR 800
Query: 402 KLEEKERFLQTVLTNAEK 419
KL F+Q + T +K
Sbjct: 801 KL-----FVQDLATRVKK 813
>sp|Q3TPX4|EXOC5_MOUSE Exocyst complex component 5 OS=Mus musculus GN=Exoc5 PE=1 SV=2
Length = 708
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 292 KLADEEAMRKIKQLEDQTHQLQKQVATHKQEEEALLNEMEVTGQAFEDMQEQNSRLLQQL 351
++ DE RK+++LE Q + K+ A QE L +V Q F+++ E S + ++
Sbjct: 54 QIMDERIQRKVEKLEQQCQKEAKEFAKKVQE---LQKSNQVAFQHFQELDEHISYVATKV 110
Query: 352 REKDDANFKLMTERIKSNQLHKLAREEKDTLREQVQALSLQIEAMHTAIRKLEEKERFLQ 411
D + T R ++ + KL + + L ++++ + T K++E +Q
Sbjct: 111 CHLGDQLEGVNTPRQRAVEAQKLMKYFNEFLDGELKS------DVFTNSEKIKEAADVIQ 164
Query: 412 TVLTNAEKELHLRNQAMDLNKRKAIES--AQSAADLKLHLVIIYTNGPARLEFGKDREFS 469
+LHL Q + ++ ++S A DL+ L+ +T+ R E + RE +
Sbjct: 165 --------KLHLIAQELPFDRFSEVKSKIASKYHDLECQLIQEFTSAQRRGEVSRMREVA 216
Query: 470 AKFVNFRRKSY 480
A ++F+ S+
Sbjct: 217 AVLLHFKGYSH 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,937,597
Number of Sequences: 539616
Number of extensions: 6190633
Number of successful extensions: 48230
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 1823
Number of HSP's that attempted gapping in prelim test: 39719
Number of HSP's gapped (non-prelim): 7805
length of query: 517
length of database: 191,569,459
effective HSP length: 122
effective length of query: 395
effective length of database: 125,736,307
effective search space: 49665841265
effective search space used: 49665841265
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)