Your job contains 1 sequence.
>psy10800
MKKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR
KCPKCNAAFGANDYHRLYLGS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10800
(81 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086694 - symbol:Bre1 "Bre1" species:7227 "Drosoph... 398 7.4e-36 1
UNIPROTKB|F1N9A6 - symbol:RNF20 "E3 ubiquitin-protein lig... 329 1.6e-28 1
UNIPROTKB|Q5ZLS3 - symbol:RNF20 "E3 ubiquitin-protein lig... 329 1.6e-28 1
MGI|MGI:1925927 - symbol:Rnf20 "ring finger protein 20" s... 328 2.0e-28 1
RGD|1311936 - symbol:Rnf20 "ring finger protein 20, E3 ub... 328 2.0e-28 1
UNIPROTKB|A2VDP1 - symbol:RNF20 "E3 ubiquitin-protein lig... 328 2.0e-28 1
UNIPROTKB|F6XUF9 - symbol:RNF20 "Uncharacterized protein"... 328 2.0e-28 1
UNIPROTKB|Q5VTR2 - symbol:RNF20 "E3 ubiquitin-protein lig... 328 2.0e-28 1
UNIPROTKB|F1SSB0 - symbol:LOC100154259 "Uncharacterized p... 328 2.0e-28 1
UNIPROTKB|E2QZB1 - symbol:RNF20 "Uncharacterized protein"... 328 2.1e-28 1
UNIPROTKB|I3L5V4 - symbol:LOC100625036 "Uncharacterized p... 328 2.1e-28 1
UNIPROTKB|F8W8Z4 - symbol:RNF40 "E3 ubiquitin-protein lig... 313 4.0e-27 1
UNIPROTKB|H3BP71 - symbol:RNF40 "E3 ubiquitin-protein lig... 313 8.1e-27 1
UNIPROTKB|O75150 - symbol:RNF40 "E3 ubiquitin-protein lig... 313 8.7e-27 1
UNIPROTKB|Q4R7K7 - symbol:RNF40 "E3 ubiquitin-protein lig... 313 8.7e-27 1
UNIPROTKB|Q5RAU7 - symbol:RNF40 "E3 ubiquitin-protein lig... 313 8.7e-27 1
UNIPROTKB|F1RG77 - symbol:RNF40 "Uncharacterized protein"... 312 1.1e-26 1
UNIPROTKB|E1BCI2 - symbol:RNF40 "Uncharacterized protein"... 312 1.1e-26 1
UNIPROTKB|E2R1L5 - symbol:RNF40 "Uncharacterized protein"... 312 1.1e-26 1
MGI|MGI:2142048 - symbol:Rnf40 "ring finger protein 40" s... 312 1.1e-26 1
RGD|628638 - symbol:Rnf40 "ring finger protein 40, E3 ubi... 312 1.1e-26 1
ZFIN|ZDB-GENE-030131-6607 - symbol:rnf40 "ring finger pro... 306 4.9e-26 1
WB|WBGene00007008 - symbol:rfp-1 species:6239 "Caenorhabd... 266 6.8e-22 1
UNIPROTKB|P34537 - symbol:rfp-1 "E3 ubiquitin-protein lig... 266 6.8e-22 1
TAIR|locus:2054997 - symbol:HUB1 "histone mono-ubiquitina... 185 3.5e-13 1
DICTYBASE|DDB_G0274241 - symbol:bre1 "RmlC-like cupin fam... 176 1.2e-12 2
SGD|S000002232 - symbol:BRE1 "E3 ubiquitin ligase" specie... 159 1.5e-10 1
POMBASE|SPCC970.10c - symbol:brl2 "ubiquitin-protein liga... 158 1.9e-10 1
TAIR|locus:2035726 - symbol:HUB2 "histone mono-ubiquitina... 159 2.1e-10 1
UNIPROTKB|Q6LFN2 - symbol:PFF0165c "RING finger protein P... 144 1.1e-08 1
CGD|CAL0003779 - symbol:BRE1 species:5476 "Candida albica... 141 1.2e-08 1
UNIPROTKB|Q5A4X0 - symbol:BRE1 "E3 ubiquitin-protein liga... 141 1.2e-08 1
FB|FBgn0037384 - symbol:dgrn "degringolade" species:7227 ... 129 6.8e-08 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 115 4.8e-07 1
UNIPROTKB|A4IFC2 - symbol:RNF185 "RNF185 protein" species... 115 5.2e-07 1
UNIPROTKB|F1PCX5 - symbol:RNF185 "Uncharacterized protein... 115 5.2e-07 1
UNIPROTKB|Q96GF1 - symbol:RNF185 "E3 ubiquitin-protein li... 115 5.2e-07 1
UNIPROTKB|F2Z4Y3 - symbol:RNF185 "Uncharacterized protein... 115 5.2e-07 1
MGI|MGI:1922078 - symbol:Rnf185 "ring finger protein 185"... 115 5.2e-07 1
RGD|1564777 - symbol:Rnf185 "ring finger protein 185" spe... 115 5.2e-07 1
UNIPROTKB|Q5ZIR9 - symbol:RNF185 "E3 ubiquitin-protein li... 115 5.5e-07 1
ZFIN|ZDB-GENE-040426-1977 - symbol:rnf185 "ring finger pr... 115 5.5e-07 1
UNIPROTKB|F1N0B8 - symbol:RNF5 "Uncharacterized protein" ... 108 2.6e-06 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 106 4.3e-06 1
UNIPROTKB|F1LUN6 - symbol:F1LUN6 "Uncharacterized protein... 106 4.3e-06 1
DICTYBASE|DDB_G0273535 - symbol:mip1-2 "MEK1 interacting ... 116 4.4e-06 1
DICTYBASE|DDB_G0273399 - symbol:mip1-1 "MEK1 interacting ... 116 4.4e-06 1
TAIR|locus:505006682 - symbol:AT5G48655 species:3702 "Ara... 108 4.5e-06 1
UNIPROTKB|E2QS10 - symbol:RNF5 "Uncharacterized protein" ... 106 4.7e-06 1
UNIPROTKB|Q99942 - symbol:RNF5 "E3 ubiquitin-protein liga... 106 4.7e-06 1
UNIPROTKB|A5A8Y3 - symbol:RNF5 "Uncharacterized protein" ... 106 4.7e-06 1
MGI|MGI:1860076 - symbol:Rnf5 "ring finger protein 5" spe... 106 4.7e-06 1
RGD|1588458 - symbol:Rnf5 "ring finger protein 5, E3 ubiq... 106 4.7e-06 1
TAIR|locus:2094608 - symbol:AT3G23060 species:3702 "Arabi... 115 4.7e-06 1
UNIPROTKB|E7EM95 - symbol:RNF5 "E3 ubiquitin-protein liga... 106 4.9e-06 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 105 5.5e-06 1
UNIPROTKB|F1NDX0 - symbol:LOC100859635 "Uncharacterized p... 116 6.6e-06 1
UNIPROTKB|F1NFB8 - symbol:LOC100859635 "Uncharacterized p... 116 6.6e-06 1
WB|WBGene00004381 - symbol:rnf-5 species:6239 "Caenorhabd... 108 7.0e-06 1
UNIPROTKB|Q09463 - symbol:rnf-5 "RING finger protein 5" s... 108 7.0e-06 1
ZFIN|ZDB-GENE-060512-34 - symbol:pcgf5b "polycomb group r... 94 7.5e-06 2
UNIPROTKB|F1SNT4 - symbol:F1SNT4 "Uncharacterized protein... 107 1.1e-05 1
FB|FBgn0030693 - symbol:CG8974 species:7227 "Drosophila m... 107 1.3e-05 1
FB|FBgn0052581 - symbol:CG32581 species:7227 "Drosophila ... 107 1.4e-05 1
POMBASE|SPCC1919.15 - symbol:brl1 "ubiquitin-protein liga... 112 1.6e-05 1
TAIR|locus:2098505 - symbol:AT3G07200 species:3702 "Arabi... 100 2.6e-05 1
UNIPROTKB|F1NGM4 - symbol:TRIM35 "Uncharacterized protein... 106 4.3e-05 1
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 105 4.7e-05 1
TAIR|locus:2086666 - symbol:AT3G27330 species:3702 "Arabi... 109 4.8e-05 1
ZFIN|ZDB-GENE-041010-71 - symbol:pex10 "peroxisome biogen... 103 4.8e-05 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 96 5.0e-05 1
UNIPROTKB|I3L768 - symbol:LOC100624129 "Uncharacterized p... 103 5.0e-05 1
UNIPROTKB|I3LSN3 - symbol:LOC100736805 "Uncharacterized p... 103 5.0e-05 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 107 5.6e-05 1
FB|FBgn0035232 - symbol:CG12099 species:7227 "Drosophila ... 107 5.7e-05 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 107 5.8e-05 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 107 6.0e-05 1
ZFIN|ZDB-GENE-060526-299 - symbol:si:dkey-3h3.3 "si:dkey-... 104 6.3e-05 1
WB|WBGene00003597 - symbol:nhl-1 species:6239 "Caenorhabd... 108 6.6e-05 1
UNIPROTKB|Q03601 - symbol:nhl-1 "RING finger protein nhl-... 108 6.6e-05 1
FB|FBgn0035233 - symbol:Pex10 "Peroxin 10" species:7227 "... 101 7.1e-05 1
WB|WBGene00000264 - symbol:brc-1 species:6239 "Caenorhabd... 105 7.8e-05 1
UNIPROTKB|B6VQ60 - symbol:brc-1 "Protein BRC-1, isoform a... 105 7.8e-05 1
UNIPROTKB|F1RWB4 - symbol:LOC100737099 "Uncharacterized p... 85 8.4e-05 2
FB|FBgn0032660 - symbol:elfless "elfless" species:7227 "D... 98 8.8e-05 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 105 9.7e-05 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 105 9.8e-05 1
UNIPROTKB|H0YH05 - symbol:RNF10 "RING finger protein 10" ... 93 0.00010 1
MGI|MGI:2684988 - symbol:Pex10 "peroxisomal biogenesis fa... 100 0.00011 1
UNIPROTKB|E1BST1 - symbol:PEX10 "Uncharacterized protein"... 100 0.00011 1
UNIPROTKB|Q28H21 - symbol:pcgf1 "Polycomb group RING fing... 98 0.00011 1
UNIPROTKB|Q4QR06 - symbol:pcgf1 "Polycomb group RING fing... 98 0.00011 1
UNIPROTKB|I3LP53 - symbol:LOC100621782 "Uncharacterized p... 84 0.00012 2
UNIPROTKB|F1NLH3 - symbol:RNF4 "Uncharacterized protein" ... 95 0.00013 1
DICTYBASE|DDB_G0269614 - symbol:DDB_G0269614 "tetratricop... 101 0.00013 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 92 0.00013 1
UNIPROTKB|O60683 - symbol:PEX10 "Peroxisome biogenesis fa... 99 0.00014 1
UNIPROTKB|Q8HXW8 - symbol:PEX10 "Peroxisome biogenesis fa... 99 0.00014 1
ZFIN|ZDB-GENE-081030-9 - symbol:trim35-35 "tripartite mot... 101 0.00014 1
RGD|1562871 - symbol:RGD1562871 "similar to BMI1-like pro... 96 0.00015 1
WARNING: Descriptions of 97 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0086694 [details] [associations]
symbol:Bre1 "Bre1" species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016570 "histone
modification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=NAS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0016574
eggNOG:NOG263074 KO:K10696 GeneTree:ENSGT00390000002866
ChiTaRS:RNF20 OMA:TAFGQND EMBL:AY058651 EMBL:BT001617 EMBL:BT082047
RefSeq:NP_647989.2 UniGene:Dm.855 ProteinModelPortal:Q9VRP9
SMR:Q9VRP9 MINT:MINT-767697 STRING:Q9VRP9 PaxDb:Q9VRP9
EnsemblMetazoa:FBtr0077116 GeneID:38652 KEGG:dme:Dmel_CG10542
CTD:38652 FlyBase:FBgn0086694 InParanoid:Q9VRP9 OrthoDB:EOG4GXD2Q
PhylomeDB:Q9VRP9 GenomeRNAi:38652 NextBio:809724 Bgee:Q9VRP9
GermOnline:CG10542 GO:GO:0006513 Uniprot:Q9VRP9
Length = 1044
Score = 398 (145.2 bits), Expect = 7.4e-36, P = 7.4e-36
Identities = 71/80 (88%), Positives = 77/80 (96%)
Query: 1 MKKIEQAGT-LDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ 59
MKK+E +GT +DEVM+EEIREYKETLTCPSCKVKRKDAVL+KCFHVFC+DCLRTRYETRQ
Sbjct: 964 MKKMEMSGTTIDEVMIEEIREYKETLTCPSCKVKRKDAVLSKCFHVFCYDCLRTRYETRQ 1023
Query: 60 RKCPKCNAAFGANDYHRLYL 79
RKCPKCN AFGANDYHRLYL
Sbjct: 1024 RKCPKCNCAFGANDYHRLYL 1043
>UNIPROTKB|F1N9A6 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0031062 "positive regulation of histone
methylation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 OMA:KQDSEDL
GO:GO:0033503 IPI:IPI00593729 EMBL:AADN02074604 EMBL:AADN02074605
EMBL:AADN02074606 EMBL:AADN02074607 EMBL:AADN02074608
Ensembl:ENSGALT00000025065 Uniprot:F1N9A6
Length = 984
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 906 KKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 965
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 966 CPKCNAAFGANDFHRIYIG 984
>UNIPROTKB|Q5ZLS3 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0033503 "HULC complex" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 CTD:56254
HOGENOM:HOG000231526 HOVERGEN:HBG080312 OrthoDB:EOG49W2DV
GO:GO:0033503 EMBL:AJ719661 IPI:IPI00593729 RefSeq:NP_001026605.1
UniGene:Gga.42047 ProteinModelPortal:Q5ZLS3 STRING:Q5ZLS3
PRIDE:Q5ZLS3 GeneID:427310 KEGG:gga:427310 InParanoid:Q5ZLS3
NextBio:20828591 Uniprot:Q5ZLS3
Length = 984
Score = 329 (120.9 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 906 KKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 965
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 966 CPKCNAAFGANDFHRIYIG 984
>MGI|MGI:1925927 [details] [associations]
symbol:Rnf20 "ring finger protein 20" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0002039
"p53 binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IMP] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030336 "negative regulation of
cell migration" evidence=ISO] [GO:0031062 "positive regulation of
histone methylation" evidence=IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISO] [GO:0033503 "HULC complex"
evidence=ISO] [GO:0033523 "histone H2B ubiquitination"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1925927 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0030336 GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907
GO:GO:0016574 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 CTD:56254 GeneTree:ENSGT00390000002866
HOVERGEN:HBG080312 OMA:KQDSEDL OrthoDB:EOG49W2DV GO:GO:0033503
EMBL:AK220492 EMBL:AL732521 EMBL:BC052482 EMBL:AK048862
EMBL:AK051278 EMBL:AK053783 EMBL:AK076501 EMBL:AK085436
EMBL:AK139883 IPI:IPI00380766 IPI:IPI00648519 RefSeq:NP_001156735.1
RefSeq:NP_892044.1 UniGene:Mm.24765 ProteinModelPortal:Q5DTM8
SMR:Q5DTM8 STRING:Q5DTM8 PhosphoSite:Q5DTM8 PaxDb:Q5DTM8
PRIDE:Q5DTM8 Ensembl:ENSMUST00000029989 Ensembl:ENSMUST00000167496
GeneID:109331 KEGG:mmu:109331 UCSC:uc008swa.2 UCSC:uc012dec.1
InParanoid:A2AIR3 NextBio:361921 Bgee:Q5DTM8 CleanEx:MM_RNF20
Genevestigator:Q5DTM8 GermOnline:ENSMUSG00000028309 GO:GO:0031062
Uniprot:Q5DTM8
Length = 973
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 895 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 954
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 955 CPKCNAAFGANDFHRIYIG 973
>RGD|1311936 [details] [associations]
symbol:Rnf20 "ring finger protein 20, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0030336 "negative regulation of
cell migration" evidence=IEA;ISO] [GO:0031062 "positive regulation
of histone methylation" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0033503 "HULC
complex" evidence=IEA;ISO] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1311936 Prosite:PS00518 GO:GO:0045893 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 InterPro:IPR017907 KO:K10696 GO:GO:0033523
GO:GO:0010390 CTD:56254 GeneTree:ENSGT00390000002866
OrthoDB:EOG49W2DV GO:GO:0033503 IPI:IPI00367304
RefSeq:NP_001101399.2 ProteinModelPortal:D3ZYQ9 PRIDE:D3ZYQ9
Ensembl:ENSRNOT00000059869 GeneID:313216 KEGG:rno:313216
UCSC:RGD:1311936 ArrayExpress:D3ZYQ9 Uniprot:D3ZYQ9
Length = 973
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 895 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 954
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 955 CPKCNAAFGANDFHRIYIG 973
>UNIPROTKB|A2VDP1 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9913 "Bos taurus" [GO:0033503 "HULC complex" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0030336
"negative regulation of cell migration" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0031062 "positive
regulation of histone methylation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0042393 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031625
GO:GO:0002039 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 EMBL:BC133334 IPI:IPI00690596 RefSeq:NP_001075056.1
UniGene:Bt.10397 ProteinModelPortal:A2VDP1 PRIDE:A2VDP1
Ensembl:ENSBTAT00000012521 GeneID:513326 KEGG:bta:513326 CTD:56254
GeneTree:ENSGT00390000002866 HOGENOM:HOG000231526
HOVERGEN:HBG080312 InParanoid:A2VDP1 OMA:KQDSEDL OrthoDB:EOG49W2DV
NextBio:20870814 ArrayExpress:A2VDP1 GO:GO:0033503 Uniprot:A2VDP1
Length = 975
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 897 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 956
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 957 CPKCNAAFGANDFHRIYIG 975
>UNIPROTKB|F6XUF9 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 CTD:56254 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:AAEX03008005 Ensembl:ENSCAFT00000004109
EMBL:AAEX03008004 RefSeq:XP_532018.3 GeneID:474788 KEGG:cfa:474788
Uniprot:F6XUF9
Length = 975
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 897 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 956
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 957 CPKCNAAFGANDFHRIYIG 975
>UNIPROTKB|Q5VTR2 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0033523 "histone H2B ubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0002039 "p53 binding" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0033503 "HULC
complex" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0042393 EMBL:AL353621 GO:GO:0000209
InterPro:IPR017907 GO:GO:0002039 eggNOG:NOG263074 KO:K10696
GO:GO:0033523 GO:GO:0010390 CTD:56254 HOVERGEN:HBG080312
OMA:KQDSEDL OrthoDB:EOG49W2DV GO:GO:0033503 EMBL:AF265230
EMBL:AK000389 EMBL:AK000697 EMBL:AK002051 EMBL:AK022300
EMBL:AK022532 EMBL:AK314401 EMBL:AL591377 EMBL:BC063115
EMBL:BC110584 EMBL:BC110585 EMBL:BC152309 EMBL:AL832910
EMBL:AL834272 IPI:IPI00251559 RefSeq:NP_062538.5 UniGene:Hs.729085
ProteinModelPortal:Q5VTR2 SMR:Q5VTR2 IntAct:Q5VTR2 STRING:Q5VTR2
PhosphoSite:Q5VTR2 DMDM:84027766 PaxDb:Q5VTR2 PRIDE:Q5VTR2
Ensembl:ENST00000389120 GeneID:56254 KEGG:hsa:56254 UCSC:uc004bbn.3
GeneCards:GC09P104296 HGNC:HGNC:10062 HPA:CAB012478 MIM:607699
neXtProt:NX_Q5VTR2 PharmGKB:PA34427 ChiTaRS:RNF20 GenomeRNAi:56254
NextBio:61893 ArrayExpress:Q5VTR2 Bgee:Q5VTR2 Genevestigator:Q5VTR2
GermOnline:ENSG00000155827 Uniprot:Q5VTR2
Length = 975
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 897 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 956
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 957 CPKCNAAFGANDFHRIYIG 975
>UNIPROTKB|F1SSB0 [details] [associations]
symbol:LOC100154259 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:CU313312 RefSeq:XP_001926629.2
Ensembl:ENSSSCT00000005942 GeneID:100154259 KEGG:ssc:100154259
Uniprot:F1SSB0
Length = 975
Score = 328 (120.5 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 897 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 956
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 957 CPKCNAAFGANDFHRIYIG 975
>UNIPROTKB|E2QZB1 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031062
"positive regulation of histone methylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0045893 GO:GO:0005730 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GO:GO:0033503 Ensembl:ENSCAFT00000004109
Uniprot:E2QZB1
Length = 977
Score = 328 (120.5 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 899 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 958
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 959 CPKCNAAFGANDFHRIYIG 977
>UNIPROTKB|I3L5V4 [details] [associations]
symbol:LOC100625036 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031062
"positive regulation of histone methylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000002866
Ensembl:ENSSSCT00000024274 OMA:VDSENIN Uniprot:I3L5V4
Length = 978
Score = 328 (120.5 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 52/79 (65%), Positives = 69/79 (87%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK + DE+++EEI++YK LTCP C +++KDAVLTKCFHVFC++C++TRY+TRQRK
Sbjct: 900 KKPDNVPKCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRK 959
Query: 62 CPKCNAAFGANDYHRLYLG 80
CPKCNAAFGAND+HR+Y+G
Sbjct: 960 CPKCNAAFGANDFHRIYIG 978
>UNIPROTKB|F8W8Z4 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
IPI:IPI01012850 ProteinModelPortal:F8W8Z4 SMR:F8W8Z4
Ensembl:ENST00000402121 UCSC:uc010vfb.2 ArrayExpress:F8W8Z4
Bgee:F8W8Z4 Uniprot:F8W8Z4
Length = 693
Score = 313 (115.2 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 615 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 674
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 675 CPKCNAAFGAHDFHRIYI 692
>UNIPROTKB|H3BP71 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
ProteinModelPortal:H3BP71 SMR:H3BP71 Ensembl:ENST00000563683
Bgee:H3BP71 Uniprot:H3BP71
Length = 961
Score = 313 (115.2 bits), Expect = 8.1e-27, P = 8.1e-27
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 883 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 942
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 943 CPKCNAAFGAHDFHRIYI 960
>UNIPROTKB|O75150 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017075 "syntaxin-1 binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0033503 "HULC
complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0043005
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AF122819
EMBL:AB014561 EMBL:AK027406 EMBL:BX640763 EMBL:CR627431
EMBL:AC106886 EMBL:BC004527 EMBL:BC006133 EMBL:BC011769
EMBL:BC018647 EMBL:BC030802 IPI:IPI00162563 IPI:IPI00290648
IPI:IPI00377273 PIR:JC7363 RefSeq:NP_001193962.1
RefSeq:NP_001193963.1 RefSeq:NP_055586.1 UniGene:Hs.65238
ProteinModelPortal:O75150 SMR:O75150 IntAct:O75150
MINT:MINT-1466706 STRING:O75150 PhosphoSite:O75150 PaxDb:O75150
PRIDE:O75150 DNASU:9810 Ensembl:ENST00000324685
Ensembl:ENST00000357890 GeneID:9810 KEGG:hsa:9810 UCSC:uc002dzq.3
UCSC:uc010cab.3 CTD:9810 GeneCards:GC16P030773 HGNC:HGNC:16867
HPA:HPA041330 MIM:607700 neXtProt:NX_O75150 PharmGKB:PA34440
InParanoid:O75150 OMA:CHESQGE OrthoDB:EOG4933HD PhylomeDB:O75150
GenomeRNAi:9810 NextBio:36932 ArrayExpress:O75150 Bgee:O75150
CleanEx:HS_RNF40 Genevestigator:O75150 GermOnline:ENSG00000103549
Uniprot:O75150
Length = 1001
Score = 313 (115.2 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRIYI 1000
>UNIPROTKB|Q4R7K7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9541 "Macaca fascicularis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISS] [GO:0033503 "HULC
complex" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AB168810
ProteinModelPortal:Q4R7K7 PRIDE:Q4R7K7 Uniprot:Q4R7K7
Length = 1001
Score = 313 (115.2 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRIYI 1000
>UNIPROTKB|Q5RAU7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0010390
"histone monoubiquitination" evidence=ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISS] [GO:0033503 "HULC complex"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 KO:K10696
GO:GO:0033523 GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503
CTD:9810 EMBL:CR858915 EMBL:CR859085 RefSeq:NP_001125651.1
RefSeq:NP_001128807.1 UniGene:Pab.19132 UniGene:Pab.19770
ProteinModelPortal:Q5RAU7 PRIDE:Q5RAU7 GeneID:100172570
GeneID:100189714 KEGG:pon:100172570 KEGG:pon:100189714
InParanoid:Q5RAU7 Uniprot:Q5RAU7
Length = 1001
Score = 313 (115.2 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRIYI 1000
>UNIPROTKB|F1RG77 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:FP102572 Ensembl:ENSSSCT00000008534 Uniprot:F1RG77
Length = 1000
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 922 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 981
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 982 CPKCNAAFGAHDFHRVYI 999
>UNIPROTKB|E1BCI2 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 KO:K10696 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 GO:GO:0033503 CTD:9810
OMA:CHESQGE EMBL:DAAA02057908 IPI:IPI00704650 RefSeq:NP_001193381.1
UniGene:Bt.21360 ProteinModelPortal:E1BCI2
Ensembl:ENSBTAT00000004443 GeneID:539901 KEGG:bta:539901
NextBio:20878289 Uniprot:E1BCI2
Length = 1001
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRVYI 1000
>UNIPROTKB|E2R1L5 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:AAEX03004385 EMBL:AAEX03004386 Ensembl:ENSCAFT00000026446
Uniprot:E2R1L5
Length = 1001
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRVYI 1000
>MGI|MGI:2142048 [details] [associations]
symbol:Rnf40 "ring finger protein 40" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033503 "HULC complex" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2142048
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AK129184 EMBL:AK042654
EMBL:AK089805 EMBL:AK154982 EMBL:AK171462 EMBL:BC038348
IPI:IPI00621791 RefSeq:NP_758485.2 UniGene:Mm.41122
ProteinModelPortal:Q3U319 SMR:Q3U319 PhosphoSite:Q3U319
PaxDb:Q3U319 PRIDE:Q3U319 Ensembl:ENSMUST00000033088 GeneID:233900
KEGG:mmu:233900 UCSC:uc009jwe.2 InParanoid:Q3U319 NextBio:381935
Bgee:Q3U319 CleanEx:MM_RNF40 Genevestigator:Q3U319
GermOnline:ENSMUSG00000030816 Uniprot:Q3U319
Length = 1001
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 923 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 982
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 983 CPKCNAAFGAHDFHRVYI 1000
>RGD|628638 [details] [associations]
symbol:Rnf40 "ring finger protein 40, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0017075 "syntaxin-1 binding" evidence=IPI]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0033503
"HULC complex" evidence=ISO;ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:628638 Prosite:PS00518 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0046872
GO:GO:0008270 GO:GO:0043005 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AF352815 IPI:IPI00194637
RefSeq:NP_703201.1 UniGene:Rn.162466 ProteinModelPortal:Q8CJB9
IntAct:Q8CJB9 PhosphoSite:Q8CJB9 PRIDE:Q8CJB9
Ensembl:ENSRNOT00000025499 GeneID:266712 KEGG:rno:266712
UCSC:RGD:628638 InParanoid:Q8CJB9 BRENDA:6.3.2.19 NextBio:624538
Genevestigator:Q8CJB9 GermOnline:ENSRNOG00000018840 Uniprot:Q8CJB9
Length = 1002
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 51/78 (65%), Positives = 65/78 (83%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
+K+E DE++ EEI+EYK LTCP C ++KDAVLTKCFHVFC++C+R RYE RQRK
Sbjct: 924 RKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRK 983
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGA+D+HR+Y+
Sbjct: 984 CPKCNAAFGAHDFHRVYI 1001
>ZFIN|ZDB-GENE-030131-6607 [details] [associations]
symbol:rnf40 "ring finger protein 40" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-030131-6607 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000002866 EMBL:AL732488
EMBL:CT030027 IPI:IPI00615866 Ensembl:ENSDART00000145221
ArrayExpress:F6P841 Bgee:F6P841 Uniprot:F6P841
Length = 1004
Score = 306 (112.8 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 50/78 (64%), Positives = 63/78 (80%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK 61
KK+E DE++ EEI +YK L CP C + K+ VLTKCFHVFC++CL+TRY+TRQRK
Sbjct: 926 KKVEVYTDADEILQEEINQYKAKLRCPCCNTRDKETVLTKCFHVFCYECLKTRYDTRQRK 985
Query: 62 CPKCNAAFGANDYHRLYL 79
CPKCNAAFGAND+HR+Y+
Sbjct: 986 CPKCNAAFGANDFHRIYI 1003
>WB|WBGene00007008 [details] [associations]
symbol:rfp-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0040011 GO:GO:0016568 GO:GO:0016567 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0040025
InterPro:IPR017907 EMBL:FO081667 eggNOG:NOG263074 KO:K10696
GeneTree:ENSGT00390000002866 PIR:S44866 RefSeq:NP_001022699.1
RefSeq:NP_001022700.1 ProteinModelPortal:P34537 SMR:P34537
DIP:DIP-24823N IntAct:P34537 MINT:MINT-229204 STRING:P34537
PaxDb:P34537 PRIDE:P34537 EnsemblMetazoa:R05D3.4b GeneID:176180
KEGG:cel:CELE_R05D3.4 UCSC:R05D3.4b CTD:176180 WormBase:R05D3.4a
WormBase:R05D3.4b HOGENOM:HOG000095256 InParanoid:P34537
OMA:NGGISTH NextBio:891468 GO:GO:0006664 Uniprot:P34537
Length = 837
Score = 266 (98.7 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 43/74 (58%), Positives = 60/74 (81%)
Query: 6 QAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
Q+G D+V+ E R+ KETLTCPSCK + KD ++ KC+H+FC C++T Y+TRQRKCPKC
Sbjct: 766 QSG--DQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKC 823
Query: 66 NAAFGANDYHRLYL 79
N+ FGAND+HR+++
Sbjct: 824 NSNFGANDFHRIFI 837
>UNIPROTKB|P34537 [details] [associations]
symbol:rfp-1 "E3 ubiquitin-protein ligase bre-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0006664 "glycolipid metabolic process"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0040011 GO:GO:0016568 GO:GO:0016567 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0040025
InterPro:IPR017907 EMBL:FO081667 eggNOG:NOG263074 KO:K10696
GeneTree:ENSGT00390000002866 PIR:S44866 RefSeq:NP_001022699.1
RefSeq:NP_001022700.1 ProteinModelPortal:P34537 SMR:P34537
DIP:DIP-24823N IntAct:P34537 MINT:MINT-229204 STRING:P34537
PaxDb:P34537 PRIDE:P34537 EnsemblMetazoa:R05D3.4b GeneID:176180
KEGG:cel:CELE_R05D3.4 UCSC:R05D3.4b CTD:176180 WormBase:R05D3.4a
WormBase:R05D3.4b HOGENOM:HOG000095256 InParanoid:P34537
OMA:NGGISTH NextBio:891468 GO:GO:0006664 Uniprot:P34537
Length = 837
Score = 266 (98.7 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 43/74 (58%), Positives = 60/74 (81%)
Query: 6 QAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
Q+G D+V+ E R+ KETLTCPSCK + KD ++ KC+H+FC C++T Y+TRQRKCPKC
Sbjct: 766 QSG--DQVLEEANRQMKETLTCPSCKTRPKDCIMLKCYHLFCETCIKTMYDTRQRKCPKC 823
Query: 66 NAAFGANDYHRLYL 79
N+ FGAND+HR+++
Sbjct: 824 NSNFGANDFHRIFI 837
>TAIR|locus:2054997 [details] [associations]
symbol:HUB1 "histone mono-ubiquitination 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010162 "seed
dormancy process" evidence=RCA;IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010389 "regulation of G2/M transition of mitotic cell cycle"
evidence=IMP] [GO:0016049 "cell growth" evidence=RCA;IMP]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IMP] [GO:0051301 "cell division" evidence=RCA;IMP]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA;IMP] [GO:0033523 "histone H2B
ubiquitination" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0006406 "mRNA export
from nucleus" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016571 "histone methylation"
evidence=RCA] [GO:0016579 "protein deubiquitination" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033043 "regulation of organelle
organization" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0045595 "regulation of cell differentiation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048449 "floral organ formation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050665 "hydrogen
peroxide biosynthetic process" evidence=RCA] [GO:0050826 "response
to freezing" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005739
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0046872 GO:GO:0016049 GO:GO:0008270 GO:GO:0009817
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC002388 GO:GO:0009965
GO:GO:0010228 GO:GO:0004842 GO:GO:0010389 InterPro:IPR017907
EMBL:BT010360 EMBL:AY081322 IPI:IPI00518168 PIR:T00397 PIR:T00398
RefSeq:NP_182022.2 UniGene:At.43266 HSSP:Q99728
ProteinModelPortal:Q8RXD6 SMR:Q8RXD6 IntAct:Q8RXD6 STRING:Q8RXD6
PaxDb:Q8RXD6 PRIDE:Q8RXD6 EnsemblPlants:AT2G44950.1 GeneID:819104
KEGG:ath:AT2G44950 TAIR:At2g44950 eggNOG:NOG263074
HOGENOM:HOG000006004 InParanoid:Q8RXD6 KO:K10696 OMA:FCNPCVQ
PhylomeDB:Q8RXD6 ProtClustDB:CLSN2680249 Genevestigator:Q8RXD6
GO:GO:0033523 GO:GO:0010390 GO:GO:0010162 Uniprot:Q8RXD6
Length = 878
Score = 185 (70.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 4 IEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCP 63
IE + + ++ +E+ E+KE L C +C + K+ V+TKC+H+FC C++ TRQ+KCP
Sbjct: 804 IEGSSAIQKLR-QELSEFKEILKCKACNDRPKEVVITKCYHLFCNPCVQKLTGTRQKKCP 862
Query: 64 KCNAAFGANDYHRLYL 79
C+A+FG ND +Y+
Sbjct: 863 TCSASFGPNDIKPIYI 878
>DICTYBASE|DDB_G0274241 [details] [associations]
symbol:bre1 "RmlC-like cupin family protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 dictyBase:DDB_G0274241 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GenomeReviews:CM000151_GR GO:GO:0016568 GO:GO:0016567
EMBL:AAFI02000012 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 RefSeq:XP_644058.1
ProteinModelPortal:Q86KL1 EnsemblProtists:DDB0237665 GeneID:8619487
KEGG:ddi:DDB_G0274241 Uniprot:Q86KL1
Length = 1080
Score = 176 (67.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 16 EEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYH 75
EE++ + L C C ++K+ V+ KCFHVFC +C+ + +TR+R+CP CN AF D H
Sbjct: 1017 EELKLINQRLRCTICNDRQKNYVIAKCFHVFCKECIYSNIDTRKRRCPSCNRAFAETDVH 1076
Query: 76 RLY 78
++Y
Sbjct: 1077 QIY 1079
Score = 31 (16.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 1 MKKIEQAGTLDEVMLEEIRE 20
M+KIE+ + + L ++ E
Sbjct: 896 MQKIEEKSNILQKQLSKVTE 915
>SGD|S000002232 [details] [associations]
symbol:BRE1 "E3 ubiquitin ligase" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=IMP] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031571 "mitotic G1 DNA damage
checkpoint" evidence=IMP] [GO:0010390 "histone monoubiquitination"
evidence=IMP] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IGI;IPI] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IGI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IMP;IDA] InterPro:IPR001841 InterPro:IPR007087
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 SGD:S000002232
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
EMBL:BK006938 GO:GO:0006366 GO:GO:0006348 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000724 GO:GO:0004842 GO:GO:0031571
eggNOG:NOG263074 KO:K10696 GO:GO:0010390
GeneTree:ENSGT00390000002866 InterPro:IPR013956 Pfam:PF08647
EMBL:Z74122 PIR:S67610 RefSeq:NP_010209.1 ProteinModelPortal:Q07457
SMR:Q07457 DIP:DIP-2999N IntAct:Q07457 MINT:MINT-434946
STRING:Q07457 PaxDb:Q07457 PeptideAtlas:Q07457 EnsemblFungi:YDL074C
GeneID:851485 KEGG:sce:YDL074C CYGD:YDL074c HOGENOM:HOG000095255
OMA:CSLCSKN OrthoDB:EOG4QVGND NextBio:968807 Genevestigator:Q07457
GermOnline:YDL074C GO:GO:0031573 GO:GO:0042138 Uniprot:Q07457
Length = 700
Score = 159 (61.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 8 GTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNA 67
G+ DE ++EE+ ++ + C C K+ + C HVFC +C + R R RKCP CN
Sbjct: 629 GSSDEALVEELANFRTLVYCSLCSKNWKNMAIKTCGHVFCENCCKERLAARMRKCPTCNK 688
Query: 68 AFGANDYHRLYL 79
AF +ND ++L
Sbjct: 689 AFSSNDLLTVHL 700
>POMBASE|SPCC970.10c [details] [associations]
symbol:brl2 "ubiquitin-protein ligase E3 Brl2"
species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006336 "DNA
replication-independent nucleosome assembly" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0031497 "chromatin assembly" evidence=IMP]
[GO:0033503 "HULC complex" evidence=IDA] [GO:0051569 "regulation of
histone H3-K4 methylation" evidence=IMP] [GO:0071894 "histone H2B
conserved C-terminal lysine ubiquitination" evidence=IDA;IMP]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 PomBase:SPCC970.10c Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006357
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005721 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006336 eggNOG:NOG263074 KO:K10696
GO:GO:0033503 InterPro:IPR013956 Pfam:PF08647 OrthoDB:EOG4QVGND
GO:GO:0071894 GO:GO:0051569 PIR:T41670 RefSeq:NP_587845.1
ProteinModelPortal:O74563 IntAct:O74563 STRING:O74563
EnsemblFungi:SPCC970.10c.1 GeneID:2539307 KEGG:spo:SPCC970.10c
OMA:IMERENA NextBio:20800473 Uniprot:O74563
Length = 680
Score = 158 (60.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSCKVKR-KDAVLTKCFHVFCWDCLRTRYETRQR 60
+K++ G EE++ ++ C C +R KD +++ C H FC+ C++ R ETRQR
Sbjct: 604 RKLKDTGV--STSAEELKTFRAMCKCSVCNFERWKDRIISLCGHGFCYQCIQKRIETRQR 661
Query: 61 KCPKCNAAFGANDYHRLYL 79
+CP C FGA+D ++L
Sbjct: 662 RCPICGRGFGASDVIPIHL 680
>TAIR|locus:2035726 [details] [associations]
symbol:HUB2 "histone mono-ubiquitination 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010162 "seed
dormancy process" evidence=IMP] [GO:0010390 "histone
monoubiquitination" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA;IMP] [GO:0033523 "histone H2B
ubiquitination" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC027034 GO:GO:0009965 GO:GO:0010228 InterPro:IPR017907
eggNOG:NOG263074 HOGENOM:HOG000006004 KO:K10696 GO:GO:0033523
GO:GO:0010390 GO:GO:0010162 EMBL:AY085755 EMBL:BT029207
IPI:IPI00541748 IPI:IPI00891911 PIR:D96594 RefSeq:NP_001154428.1
RefSeq:NP_564680.4 UniGene:At.37093 HSSP:P38398
ProteinModelPortal:Q9C895 SMR:Q9C895 IntAct:Q9C895 STRING:Q9C895
PaxDb:Q9C895 PRIDE:Q9C895 EnsemblPlants:AT1G55250.1 GeneID:841968
KEGG:ath:AT1G55250 TAIR:At1g55250 InParanoid:Q9C895 OMA:TAFGQND
PhylomeDB:Q9C895 ProtClustDB:CLSN2698283 ArrayExpress:Q9C895
Genevestigator:Q9C895 Uniprot:Q9C895
Length = 900
Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 2 KKIEQAGT--LDEVML---EEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYE 56
K++E+ G+ ++ ++ EE++ K L C C + K+ V+ KC+H+FC C++ E
Sbjct: 818 KELEELGSESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIVKCYHLFCQQCIQRSLE 877
Query: 57 TRQRKCPKCNAAFGAND 73
R RKCP C AFG ND
Sbjct: 878 IRHRKCPGCGTAFGQND 894
>UNIPROTKB|Q6LFN2 [details] [associations]
symbol:PFF0165c "RING finger protein PFF0165c"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P25916 eggNOG:NOG263074 EMBL:AL844505
RefSeq:XP_966024.1 ProteinModelPortal:Q6LFN2 IntAct:Q6LFN2
MINT:MINT-1553359 EnsemblProtists:PFF0165c:mRNA GeneID:3885786
KEGG:pfa:PFF0165c EuPathDB:PlasmoDB:PF3D7_0603400
HOGENOM:HOG000281419 ProtClustDB:CLSZ2497371 Uniprot:Q6LFN2
Length = 1103
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
D +++EE E + L C C ++ ++ KC H++C +C+ +TR RKCP+C F
Sbjct: 1034 DHLLIEENNELRRRLICSVCMENFRNYIIIKCGHIYCNNCIFNNLKTRNRKCPQCKVPFD 1093
Query: 71 ANDYHRLYL 79
D +++L
Sbjct: 1094 KKDLQKIFL 1102
>CGD|CAL0003779 [details] [associations]
symbol:BRE1 species:5476 "Candida albicans" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0033503 "HULC complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0031571
"mitotic G1 DNA damage checkpoint" evidence=IEA] [GO:0051569
"regulation of histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031573 "intra-S DNA damage checkpoint" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0071894 "histone H2B conserved C-terminal lysine
ubiquitination" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 CGD:CAL0003779 Prosite:PS00518 GO:GO:0005634
GO:GO:0071216 GO:GO:0036180 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003700 GO:GO:0016568 GO:GO:0016567
GO:GO:0009267 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0036170
eggNOG:NOG263074 KO:K10696 EMBL:AACQ01000063 EMBL:AACQ01000062
RefSeq:XP_716814.1 RefSeq:XP_716874.1 ProteinModelPortal:Q5A4X0
STRING:Q5A4X0 GeneID:3641504 GeneID:3641568 KEGG:cal:CaO19.8591
KEGG:cal:CaO19.976 InterPro:IPR013956 Pfam:PF08647 Uniprot:Q5A4X0
Length = 681
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/69 (40%), Positives = 35/69 (50%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
DE LE +R + C C KD +T C HVFC C + R R R+CP CN F
Sbjct: 616 DEQQLEALRSIAK---CSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRCPSCNRGFS 672
Query: 71 ANDYHRLYL 79
AND ++L
Sbjct: 673 ANDLLSIHL 681
>UNIPROTKB|Q5A4X0 [details] [associations]
symbol:BRE1 "E3 ubiquitin-protein ligase BRE1"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 CGD:CAL0003779 Prosite:PS00518 GO:GO:0005634
GO:GO:0071216 GO:GO:0036180 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003700 GO:GO:0016568 GO:GO:0016567
GO:GO:0009267 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0036170
eggNOG:NOG263074 KO:K10696 EMBL:AACQ01000063 EMBL:AACQ01000062
RefSeq:XP_716814.1 RefSeq:XP_716874.1 ProteinModelPortal:Q5A4X0
STRING:Q5A4X0 GeneID:3641504 GeneID:3641568 KEGG:cal:CaO19.8591
KEGG:cal:CaO19.976 InterPro:IPR013956 Pfam:PF08647 Uniprot:Q5A4X0
Length = 681
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/69 (40%), Positives = 35/69 (50%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
DE LE +R + C C KD +T C HVFC C + R R R+CP CN F
Sbjct: 616 DEQQLEALRSIAK---CSVCSKNWKDTAITVCGHVFCSKCTQERLAARLRRCPSCNRGFS 672
Query: 71 ANDYHRLYL 79
AND ++L
Sbjct: 673 ANDLLSIHL 681
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 129 (50.5 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 10 LDEVMLEEIREYKETLTCPSC--KVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNA 67
+DE EE+ YK CP C V +++ V TKC HVFC +C+ T KCP CN
Sbjct: 255 IDESQKEEL--YK----CPICMDSVSKREPVSTKCGHVFCRECIETAIRATH-KCPICNK 307
Query: 68 AFGANDYHRLYL 79
A + R+YL
Sbjct: 308 KLTARQFFRIYL 319
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 1 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 57
>UNIPROTKB|A4IFC2 [details] [associations]
symbol:RNF185 "RNF185 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OMA:LSKVFLW OrthoDB:EOG4R7VC8 EMBL:DAAA02045640 EMBL:BC134508
IPI:IPI00689680 RefSeq:NP_001077172.1 UniGene:Bt.26786
Ensembl:ENSBTAT00000003661 GeneID:524459 KEGG:bta:524459
InParanoid:A4IFC2 NextBio:20873969 Uniprot:A4IFC2
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>UNIPROTKB|F1PCX5 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:AAEX03014800 RefSeq:XP_852634.1
ProteinModelPortal:F1PCX5 Ensembl:ENSCAFT00000020620 GeneID:486362
KEGG:cfa:486362 Uniprot:F1PCX5
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>UNIPROTKB|Q96GF1 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 EMBL:CH471095 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC002073 EMBL:AC005005 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:DQ296559 EMBL:DQ296561 EMBL:DQ296562
EMBL:DQ296565 EMBL:CR456349 EMBL:AK095947 EMBL:AK291236
EMBL:BC009504 EMBL:BC026040 EMBL:BC033166 EMBL:BC012817
EMBL:BC035684 IPI:IPI00182628 IPI:IPI00435433 RefSeq:NP_001129297.1
RefSeq:NP_689480.2 UniGene:Hs.517553 ProteinModelPortal:Q96GF1
SMR:Q96GF1 IntAct:Q96GF1 PhosphoSite:Q96GF1 DMDM:74751883
PRIDE:Q96GF1 DNASU:91445 Ensembl:ENST00000266252
Ensembl:ENST00000326132 Ensembl:ENST00000518626 GeneID:91445
KEGG:hsa:91445 UCSC:uc003akb.3 GeneCards:GC22P031556
HGNC:HGNC:26783 HPA:HPA048329 neXtProt:NX_Q96GF1
PharmGKB:PA142671056 InParanoid:Q96GF1 PhylomeDB:Q96GF1
ChiTaRS:RNF185 GenomeRNAi:91445 NextBio:77254 ArrayExpress:Q96GF1
Bgee:Q96GF1 CleanEx:HS_RNF185 Genevestigator:Q96GF1
GermOnline:ENSG00000138942 Uniprot:Q96GF1
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>UNIPROTKB|F2Z4Y3 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:CT573044 RefSeq:XP_001925859.1 UniGene:Ssc.80754
ProteinModelPortal:F2Z4Y3 SMR:F2Z4Y3 Ensembl:ENSSSCT00000010981
GeneID:100157569 KEGG:ssc:100157569 Uniprot:F2Z4Y3
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>MGI|MGI:1922078 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1922078 Prosite:PS00518 GO:GO:0016021
GO:GO:0005741 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OrthoDB:EOG4R7VC8 ChiTaRS:RNF185 EMBL:AK034108 EMBL:AK052436
EMBL:AK053358 EMBL:AK075756 EMBL:AK077638 EMBL:AK149640
EMBL:AK165895 EMBL:AK167455 EMBL:AK168904 EMBL:BC014812
IPI:IPI00329937 IPI:IPI00453942 RefSeq:NP_663330.2
UniGene:Mm.136973 ProteinModelPortal:Q91YT2 SMR:Q91YT2
PhosphoSite:Q91YT2 PRIDE:Q91YT2 Ensembl:ENSMUST00000064364
Ensembl:ENSMUST00000077078 GeneID:193670 KEGG:mmu:193670
UCSC:uc007hsv.1 InParanoid:Q91YT2 OMA:WIALIFM NextBio:371498
Bgee:Q91YT2 CleanEx:MM_RNF185 Genevestigator:Q91YT2
GermOnline:ENSMUSG00000020448 Uniprot:Q91YT2
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>RGD|1564777 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10116 "Rattus
norvegicus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1564777
Prosite:PS00518 GO:GO:0016021 GO:GO:0005741 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006914 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOGENOM:HOG000238304 KO:K10666 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:BC092655 IPI:IPI00195276
RefSeq:NP_001019442.1 UniGene:Rn.7234 ProteinModelPortal:Q568Y3
PhosphoSite:Q568Y3 Ensembl:ENSRNOT00000026134 GeneID:360967
KEGG:rno:360967 UCSC:RGD:1564777 InParanoid:Q568Y3 NextBio:674743
Genevestigator:Q568Y3 GermOnline:ENSRNOG00000019325 Uniprot:Q568Y3
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 36 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 92
>UNIPROTKB|Q5ZIR9 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006914
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 EMBL:AJ720715
IPI:IPI00586277 RefSeq:NP_001007841.1 UniGene:Gga.4866
ProteinModelPortal:Q5ZIR9 Ensembl:ENSGALT00000011276 GeneID:416965
KEGG:gga:416965 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 InParanoid:Q5ZIR9
OMA:LSKVFLW OrthoDB:EOG4R7VC8 NextBio:20820352 ArrayExpress:Q5ZIR9
Uniprot:Q5ZIR9
Length = 194
Score = 115 (45.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 38 TFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 94
>ZFIN|ZDB-GENE-040426-1977 [details] [associations]
symbol:rnf185 "ring finger protein 185"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1977
GO:GO:0016021 GO:GO:0005741 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 OrthoDB:EOG4R7VC8 EMBL:BC059445 IPI:IPI00506188
RefSeq:NP_998202.1 UniGene:Dr.11136 ProteinModelPortal:Q6PC78
Ensembl:ENSDART00000046781 GeneID:406310 KEGG:dre:406310
InParanoid:Q6PC78 NextBio:20817938 Bgee:Q6PC78 Uniprot:Q6PC78
Length = 194
Score = 115 (45.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
T C C KDAV++ C H+FCW CL ETR + CP C A + LY
Sbjct: 38 TFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 94
>UNIPROTKB|F1N0B8 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 GeneTree:ENSGT00390000014107
OMA:FQSFGDT EMBL:DAAA02055357 IPI:IPI00699444 UniGene:Bt.1678
Ensembl:ENSBTAT00000035701 Uniprot:F1N0B8
Length = 180
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A + LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISRENVVPLY 80
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 5 EQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCP 63
E+ G+ +E L + E ++C CK DA +T+C H FC C+ +E R CP
Sbjct: 36 EREGSDEEERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CP 94
Query: 64 KCN 66
KCN
Sbjct: 95 KCN 97
>DICTYBASE|DDB_G0273535 [details] [associations]
symbol:mip1-2 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF-GANDYHRLYL 79
+ L CP C K V T C H+FC DC+ + +++ CP CNA G YH +Y+
Sbjct: 496 KNLECPICFEDTKPYVSTLCGHIFCSDCIVNALK-KKKSCPVCNAKLHGKKPYHPIYI 552
>DICTYBASE|DDB_G0273399 [details] [associations]
symbol:mip1-1 "MEK1 interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0273535 dictyBase:DDB_G0273399 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GenomeReviews:CM000151_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AAFI02000010
InterPro:IPR017907 eggNOG:NOG327779 RefSeq:XP_644602.1
RefSeq:XP_644649.1 ProteinModelPortal:Q557I6
EnsemblProtists:DDB0191344 EnsemblProtists:DDB0238528
GeneID:8618966 GeneID:8619011 KEGG:ddi:DDB_G0273399
KEGG:ddi:DDB_G0273535 InParanoid:Q557I6 ProtClustDB:CLSZ2431236
Uniprot:Q557I6
Length = 552
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF-GANDYHRLYL 79
+ L CP C K V T C H+FC DC+ + +++ CP CNA G YH +Y+
Sbjct: 496 KNLECPICFEDTKPYVSTLCGHIFCSDCIVNALK-KKKSCPVCNAKLHGKKPYHPIYI 552
>TAIR|locus:505006682 [details] [associations]
symbol:AT5G48655 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG327779
EMBL:AY150482 EMBL:AK118224 IPI:IPI00544715 RefSeq:NP_568701.1
RefSeq:NP_851156.1 RefSeq:NP_974908.1 UniGene:At.22299
ProteinModelPortal:Q8GS41 SMR:Q8GS41 PaxDb:Q8GS41 PRIDE:Q8GS41
EnsemblPlants:AT5G48655.1 EnsemblPlants:AT5G48655.2
EnsemblPlants:AT5G48655.3 GeneID:834923 KEGG:ath:AT5G48655
TAIR:At5g48655 HOGENOM:HOG000070995 InParanoid:Q8GS41 OMA:PANISNK
PhylomeDB:Q8GS41 ProtClustDB:CLSN2689957 ArrayExpress:Q8GS41
Genevestigator:Q8GS41 Uniprot:Q8GS41
Length = 203
Score = 108 (43.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 26 TCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRLYL 79
TCP C + + TKC H+FC C++ +RQ KCP C A + R++L
Sbjct: 147 TCPICMCPFTEEMSTKCGHIFCKGCIKMAI-SRQGKCPTCRKKVTAKELIRVFL 199
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 106 (42.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>UNIPROTKB|Q99942 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IDA] [GO:0044257 "cellular
protein catabolic process" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IMP] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 EMBL:AL662884
GO:GO:0071712 EMBL:U89336 EMBL:AL845464 EMBL:BX284686 EMBL:BX927239
EMBL:CR933878 EMBL:CR812478 EMBL:AL662830 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 HOVERGEN:HBG054495 EMBL:AB056869
EMBL:AJ243936 EMBL:AK311859 EMBL:BT007105 EMBL:BC004155
EMBL:BC111392 EMBL:BC119741 EMBL:BC119742 EMBL:BC127651
EMBL:BC127652 EMBL:BC148255 IPI:IPI00012608 RefSeq:NP_008844.1
UniGene:Hs.731774 ProteinModelPortal:Q99942 SMR:Q99942
DIP:DIP-29268N IntAct:Q99942 MINT:MINT-1032027 STRING:Q99942
PhosphoSite:Q99942 DMDM:74762702 PRIDE:Q99942 DNASU:6048
Ensembl:ENST00000375094 Ensembl:ENST00000413786
Ensembl:ENST00000432616 Ensembl:ENST00000445885
Ensembl:ENST00000449794 Ensembl:ENST00000453473
Ensembl:ENST00000456167 GeneID:6048 KEGG:hsa:6048 UCSC:uc003oaj.4
CTD:6048 GeneCards:GC06P032146 H-InvDB:HIX0034363 HGNC:HGNC:10068
HPA:CAB034107 MIM:602677 neXtProt:NX_Q99942 PharmGKB:PA34442
InParanoid:Q99942 OMA:FQSFGDT OrthoDB:EOG469QVX GenomeRNAi:6048
NextBio:23565 ArrayExpress:Q99942 Bgee:Q99942 CleanEx:HS_RNF5
Genevestigator:Q99942 GermOnline:ENSG00000204308 Uniprot:Q99942
Length = 180
Score = 106 (42.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>UNIPROTKB|A5A8Y3 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 EMBL:AL773562 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 CTD:6048 OMA:FQSFGDT OrthoDB:EOG469QVX
EMBL:CT954269 RefSeq:NP_001116696.1 UniGene:Ssc.1246
ProteinModelPortal:A5A8Y3 Ensembl:ENSSSCT00000001585
GeneID:100144528 KEGG:ssc:100144528 Uniprot:A5A8Y3
Length = 180
Score = 106 (42.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>MGI|MGI:1860076 [details] [associations]
symbol:Rnf5 "ring finger protein 5" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
[GO:0071712 "ER-associated misfolded protein catabolic process"
evidence=ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AF030001 MGI:MGI:1860076 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC016449 IPI:IPI00128461
PIR:T09063 RefSeq:NP_062276.1 UniGene:Mm.274542
ProteinModelPortal:O35445 SMR:O35445 MINT:MINT-1341225
STRING:O35445 PhosphoSite:O35445 PRIDE:O35445
Ensembl:ENSMUST00000015622 GeneID:54197 KEGG:mmu:54197
UCSC:uc008ccy.1 InParanoid:O35445 NextBio:311046 Bgee:O35445
CleanEx:MM_RNF5 Genevestigator:O35445 GermOnline:ENSMUSG00000015478
Uniprot:O35445
Length = 180
Score = 106 (42.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLY 80
>RGD|1588458 [details] [associations]
symbol:Rnf5 "ring finger protein 5, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0044257
"cellular protein catabolic process" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA;ISO] [GO:0071712
"ER-associated misfolded protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1588458 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC088341 IPI:IPI00215379
RefSeq:NP_001102495.1 UniGene:Rn.136937 ProteinModelPortal:Q5M807
SMR:Q5M807 STRING:Q5M807 Ensembl:ENSRNOT00000000501 GeneID:407784
KEGG:rno:407784 UCSC:RGD:1588458 InParanoid:Q5M807 NextBio:696189
Genevestigator:Q5M807 GermOnline:ENSRNOG00000000438 Uniprot:Q5M807
Length = 180
Score = 106 (42.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLY 80
>TAIR|locus:2094608 [details] [associations]
symbol:AT3G23060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG304672 EMBL:AB026655 KO:K16277 EMBL:AY099845
EMBL:BT006623 IPI:IPI00546320 RefSeq:NP_188946.2 UniGene:At.37773
UniGene:At.67676 ProteinModelPortal:Q9LS86 SMR:Q9LS86 IntAct:Q9LS86
PRIDE:Q9LS86 EnsemblPlants:AT3G23060.1 GeneID:821880
KEGG:ath:AT3G23060 TAIR:At3g23060 HOGENOM:HOG000153088
InParanoid:Q9LS86 OMA:NKFINER PhylomeDB:Q9LS86
ProtClustDB:CLSN2917950 Genevestigator:Q9LS86 Uniprot:Q9LS86
Length = 480
Score = 115 (45.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 24/68 (35%), Positives = 34/68 (50%)
Query: 14 MLEEI--REYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRY-ETRQRKCPKCNAAF 69
ML ++ +E K L CP C KDA +++C H FC C+R ++ R CP CN
Sbjct: 1 MLTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNL 60
Query: 70 GANDYHRL 77
G +L
Sbjct: 61 GVFPLEKL 68
>UNIPROTKB|E7EM95 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662884 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 EMBL:AL662830
HGNC:HGNC:10068 IPI:IPI00910392 SMR:E7EM95 Ensembl:ENST00000427134
Ensembl:ENST00000547812 Ensembl:ENST00000548239
Ensembl:ENST00000549150 Ensembl:ENST00000549680
Ensembl:ENST00000549803 Ensembl:ENST00000550243 Uniprot:E7EM95
Length = 182
Score = 106 (42.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR--QRKCPKCNAAFGANDYHRLY 78
T C C ++AV++ C H++CW CL ETR +++CP C A LY
Sbjct: 24 TFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLY 80
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++ + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 28 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 79
>UNIPROTKB|F1NDX0 [details] [associations]
symbol:LOC100859635 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AADN02016908
IPI:IPI00681507 Ensembl:ENSGALT00000032949 ArrayExpress:F1NDX0
Uniprot:F1NDX0
Length = 742
Score = 116 (45.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 26 TCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
TCP C K D +LTKC HVFC C++ E +Q CP CN +G
Sbjct: 562 TCPICMEKIVDKEILTKCKHVFCKSCIKKALEYKQT-CPVCNTVYG 606
>UNIPROTKB|F1NFB8 [details] [associations]
symbol:LOC100859635 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0010390 GeneTree:ENSGT00440000035370
OMA:GIQKGNQ EMBL:AADN02016908 IPI:IPI00577596
Ensembl:ENSGALT00000019727 ArrayExpress:F1NFB8 Uniprot:F1NFB8
Length = 743
Score = 116 (45.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 26 TCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
TCP C K D +LTKC HVFC C++ E +Q CP CN +G
Sbjct: 563 TCPICMEKIVDKEILTKCKHVFCKSCIKKALEYKQT-CPVCNTVYG 607
>WB|WBGene00004381 [details] [associations]
symbol:rnf-5 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0055120 "striated muscle dense body" evidence=IDA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0055002 "striated muscle cell
development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IDA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0008340 GO:GO:0046872 GO:GO:0030054 GO:GO:0018996
GO:GO:0055120 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787
GO:GO:0055002 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 108 (43.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
C C KDAV++ C H+FCW CL +TR CP C +A N +Y
Sbjct: 26 CNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIY 79
>UNIPROTKB|Q09463 [details] [associations]
symbol:rnf-5 "RING finger protein 5" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
GO:GO:0030054 GO:GO:0018996 GO:GO:0055120 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787 GO:GO:0055002
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 108 (43.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKCNAAFGANDYHRLY 78
C C KDAV++ C H+FCW CL +TR CP C +A N +Y
Sbjct: 26 CNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIY 79
>ZFIN|ZDB-GENE-060512-34 [details] [associations]
symbol:pcgf5b "polycomb group ring finger 5b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060512-34 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 KO:K11489 OrthoDB:EOG4NKBW6
EMBL:BC116619 IPI:IPI00630550 RefSeq:NP_001038700.1
UniGene:Dr.78700 ProteinModelPortal:Q1JPS1 SMR:Q1JPS1 STRING:Q1JPS1
Ensembl:ENSDART00000086211 GeneID:692252 KEGG:dre:692252 CTD:692252
InParanoid:Q1JPS1 OMA:FYQSYPM NextBio:20902468 Bgee:Q1JPS1
Uniprot:Q1JPS1
Length = 232
Score = 94 (38.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 18 IREYKETLTCPSCK-VKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
+R++ +TC CK K +T+C H FC C+ +E CPKC
Sbjct: 9 VRDFNHFITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFED-SNDCPKC 56
Score = 30 (15.6 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 70 GANDYHR 76
G DYHR
Sbjct: 124 GDGDYHR 130
>UNIPROTKB|F1SNT4 [details] [associations]
symbol:F1SNT4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:CU468647
Ensembl:ENSSSCT00000009065 OMA:DVNPHIV Uniprot:F1SNT4
Length = 259
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K+++ GT +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDRYGTREEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>FB|FBgn0030693 [details] [associations]
symbol:CG8974 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 OrthoDB:EOG4QBZN7 EMBL:AY060297
RefSeq:NP_573076.1 RefSeq:NP_727896.1 RefSeq:NP_727897.1
RefSeq:NP_996448.1 RefSeq:NP_996449.1 UniGene:Dm.7984 SMR:Q9VXP1
STRING:Q9VXP1 EnsemblMetazoa:FBtr0074185 EnsemblMetazoa:FBtr0074186
EnsemblMetazoa:FBtr0074187 EnsemblMetazoa:FBtr0074188
EnsemblMetazoa:FBtr0074189 GeneID:32532 KEGG:dme:Dmel_CG8974
UCSC:CG8974-RA FlyBase:FBgn0030693 InParanoid:Q9VXP1 OMA:ENNDETS
GenomeRNAi:32532 NextBio:778955 Uniprot:Q9VXP1
Length = 277
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/54 (44%), Positives = 28/54 (51%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR-QRK-CPKCNAAFGANDYHRLY 78
C C KDAV++ C H+FCW CL TR RK CP C AA + LY
Sbjct: 125 CNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLY 178
>FB|FBgn0052581 [details] [associations]
symbol:CG32581 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 EMBL:BT082041 RefSeq:NP_001096988.2
RefSeq:NP_727898.2 UniGene:Dm.33538 SMR:Q8IR26 IntAct:Q8IR26
MINT:MINT-741955 STRING:Q8IR26 EnsemblMetazoa:FBtr0074184
EnsemblMetazoa:FBtr0113439 GeneID:318098 KEGG:dme:Dmel_CG32581
UCSC:CG32581-RA FlyBase:FBgn0052581 InParanoid:Q8IR26
OrthoDB:EOG4QBZN7 GenomeRNAi:318098 NextBio:844797 Uniprot:Q8IR26
Length = 283
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/54 (44%), Positives = 28/54 (51%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR-QRK-CPKCNAAFGANDYHRLY 78
C C KDAV++ C H+FCW CL TR RK CP C AA + LY
Sbjct: 125 CNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLY 178
>POMBASE|SPCC1919.15 [details] [associations]
symbol:brl1 "ubiquitin-protein ligase E3 Brl1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006336 "DNA replication-independent nucleosome
assembly" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0008270 "zinc ion
binding" evidence=ISM] [GO:0031497 "chromatin assembly"
evidence=IMP] [GO:0033503 "HULC complex" evidence=IDA] [GO:0051569
"regulation of histone H3-K4 methylation" evidence=IMP] [GO:0071894
"histone H2B conserved C-terminal lysine ubiquitination"
evidence=IDA;IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 PomBase:SPCC1919.15 Prosite:PS00518
GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006357 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 GO:GO:0005721 InterPro:IPR017907
GO:GO:0006336 eggNOG:NOG263074 KO:K10696 GO:GO:0033503
InterPro:IPR013956 Pfam:PF08647 OrthoDB:EOG4QVGND
RefSeq:NP_588497.1 ProteinModelPortal:Q1MTQ0 IntAct:Q1MTQ0
STRING:Q1MTQ0 EnsemblFungi:SPCC1919.15.1 GeneID:2539102
KEGG:spo:SPCC1919.15 NextBio:20800274 GO:GO:0071894 GO:GO:0051569
Uniprot:Q1MTQ0
Length = 692
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 16 EEIREYKETLTCPSCKVKR-KDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDY 74
+E + YK L C C K ++ C H FC +C+ YE + CP+C F +D
Sbjct: 628 QEAQVYKGMLKCSVCNFSNWKSKLIPNCGHAFCSNCMEPFYEHKTSTCPQCETPFSVSDI 687
Query: 75 HRLYL 79
++L
Sbjct: 688 LTIHL 692
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 100 (40.3 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 26 TCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRLYL 79
+CP C V TKC H+FC C++ Q KCP C D R++L
Sbjct: 126 SCPICLCPFTQEVSTKCGHIFCKKCIKNALSL-QAKCPTCRKKITVKDLIRVFL 178
>UNIPROTKB|F1NGM4 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR006574
SMART:SM00589 GeneTree:ENSGT00680000099496 EMBL:AADN02018387
EMBL:AADN02018388 IPI:IPI00588433 Ensembl:ENSGALT00000026786
OMA:HEEANLF Uniprot:F1NGM4
Length = 477
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 21 YKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAND 73
+KE L CP C ++AV C H FC C+ +E RQ CP C +D
Sbjct: 7 FKEELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRQHTCPVCKETSSFDD 59
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 105 (42.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++ + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 122 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 173
>TAIR|locus:2086666 [details] [associations]
symbol:AT3G27330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008166 Pfam:PF01697 IPI:IPI00542360 RefSeq:NP_189369.1
UniGene:At.5839 ProteinModelPortal:F4IWG7 SMR:F4IWG7 PRIDE:F4IWG7
EnsemblPlants:AT3G27330.1 GeneID:822354 KEGG:ath:AT3G27330
OMA:CRQLIGN ArrayExpress:F4IWG7 Uniprot:F4IWG7
Length = 913
Score = 109 (43.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 2 KKIE--QAGTLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ 59
KKI+ + D V+L I + ++ L+C C + T C H FC CLR+ +
Sbjct: 697 KKIDKDEKSLSDHVVLPCIDKLRDELSCAICLEICFEPSTTTCGHSFCKKCLRSAADKCG 756
Query: 60 RKCPKCNAAFGANDY 74
RKCPKC G Y
Sbjct: 757 RKCPKCRQLIGNGRY 771
>ZFIN|ZDB-GENE-041010-71 [details] [associations]
symbol:pex10 "peroxisome biogenesis factor 10"
species:7955 "Danio rerio" [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0007031 "peroxisome organization" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
Prosite:PS00518 ZFIN:ZDB-GENE-041010-71 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 eggNOG:COG5574 KO:K13346 OMA:FRQRQRA
PANTHER:PTHR23350 Pfam:PF04757 CTD:5192 HOGENOM:HOG000180194
HOVERGEN:HBG053568 GeneTree:ENSGT00510000048446 OrthoDB:EOG4TB4C1
EMBL:CU570796 EMBL:BC083412 IPI:IPI00504298 RefSeq:NP_001005994.1
UniGene:Dr.91787 STRING:Q5XJ92 Ensembl:ENSDART00000060853
GeneID:449821 KEGG:dre:449821 InParanoid:Q5XJ92 NextBio:20832893
Uniprot:Q5XJ92
Length = 318
Score = 103 (41.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 24 TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRL-YLGS 81
T C C +R++ T C H+FCW+C+ T + + +CP C F HRL YL S
Sbjct: 262 TSRCILCLEERRNTTSTPCGHLFCWECI-TEWCNTKNECPLCREKFQP---HRLVYLRS 316
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR-----KCPKCNAAF 69
KE +TCP C K+ V T C H FC C+ YE+ + CP C +
Sbjct: 10 KEEVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCY 62
>UNIPROTKB|I3L768 [details] [associations]
symbol:LOC100624129 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 PANTHER:PTHR23350 Pfam:PF04757
GeneTree:ENSGT00510000048446 OMA:AGWASKK EMBL:FP565908
RefSeq:XP_003356175.1 Ensembl:ENSSSCT00000032291 GeneID:100624129
KEGG:ssc:100624129 Uniprot:I3L768
Length = 326
Score = 103 (41.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
C C +R+ A T C H+FCW+C+ T + + +CP C F
Sbjct: 273 CTLCLEERRHATATPCGHLFCWECI-THWSDTKAECPLCREKF 314
>UNIPROTKB|I3LSN3 [details] [associations]
symbol:LOC100736805 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350
Pfam:PF04757 GeneTree:ENSGT00510000048446 EMBL:FP565395
RefSeq:XP_003481979.1 Ensembl:ENSSSCT00000027142 GeneID:100736805
KEGG:ssc:100736805 Uniprot:I3LSN3
Length = 326
Score = 103 (41.3 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
C C +R+ A T C H+FCW+C+ T + + +CP C F
Sbjct: 273 CTLCLEERRHATATPCGHLFCWECI-THWSDTKAECPLCREKF 314
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 107 (42.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++ + CP C ++A +TKC H FC+ C+R E R CPKCN
Sbjct: 85 LINPYEDKSNDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNR-CPKCN 136
>FB|FBgn0035232 [details] [associations]
symbol:CG12099 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG330884 GeneTree:ENSGT00390000001731
OMA:HINEIND EMBL:AY061108 RefSeq:NP_647623.1 RefSeq:NP_728629.1
UniGene:Dm.812 SMR:Q9W0D8 EnsemblMetazoa:FBtr0072828
EnsemblMetazoa:FBtr0072829 GeneID:38181 KEGG:dme:Dmel_CG12099
UCSC:CG12099-RA FlyBase:FBgn0035232 InParanoid:Q9W0D8
OrthoDB:EOG4G1JXN GenomeRNAi:38181 NextBio:807382 Uniprot:Q9W0D8
Length = 708
Score = 107 (42.7 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 10 LDEVMLEEIR-EYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLR---TRYETRQRKCPKC 65
+D +E+I + E L CP C A LT+C H +CW CL + + RKCP C
Sbjct: 194 IDWSYIEQINIQTTEELQCPICLYPPVAAKLTRCGHAYCWPCLLHYLSLSDKTWRKCPIC 253
Query: 66 NAAFGAND 73
A A D
Sbjct: 254 YDAIHAGD 261
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 107 (42.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+L + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 109 LLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 160
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+L + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 125 LLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 176
>ZFIN|ZDB-GENE-060526-299 [details] [associations]
symbol:si:dkey-3h3.3 "si:dkey-3h3.3" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060526-299 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG84763 HOGENOM:HOG000007352 GeneTree:ENSGT00440000035370
EMBL:BX470172 IPI:IPI00817514 RefSeq:NP_001116534.1
UniGene:Dr.74755 Ensembl:ENSDART00000147767 GeneID:100144568
KEGG:dre:100144568 InParanoid:A2BGH5 OMA:PKGGTMT OrthoDB:EOG49S67K
NextBio:20791457 Uniprot:A2BGH5
Length = 441
Score = 104 (41.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 16 EEIREYKETLTCPSC--KVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGA 71
E+ + + TCP C +K ++ VLTKC H FC DCL T ++ + CP C +G+
Sbjct: 248 EKTSDQAKDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQLKPA-CPICGEIYGS 305
>WB|WBGene00003597 [details] [associations]
symbol:nhl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 108 (43.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 18 IREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR--KCPKCNA 67
+ + ++ LTCP C + K L C H FC+ CL + +T R KCP+C A
Sbjct: 34 LEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRA 85
>UNIPROTKB|Q03601 [details] [associations]
symbol:nhl-1 "RING finger protein nhl-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 108 (43.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 18 IREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR--KCPKCNA 67
+ + ++ LTCP C + K L C H FC+ CL + +T R KCP+C A
Sbjct: 34 LEKIEQLLTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRA 85
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 101 (40.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 1 MKKIEQAGTLDEVMLEEIREYKE----TLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYE 56
++ I+QAG + L+ K+ T C C R D+ LT C H+FCW CL E
Sbjct: 219 LESIKQAG---KNFLQRSSSTKDVDPNTPQCILCLEPRSDSSLTPCGHIFCWSCLLEWLE 275
Query: 57 TRQRKCPKC 65
R +CP C
Sbjct: 276 ERD-ECPLC 283
>WB|WBGene00000264 [details] [associations]
symbol:brc-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0051307
"meiotic chromosome separation" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0031436
"BRCA1-BARD1 complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0006289 "nucleotide-excision repair" evidence=IGI;IMP]
InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000724 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 InterPro:IPR017907 GO:GO:0006289 GO:GO:0031436
GO:GO:0051307 eggNOG:NOG274496 PANTHER:PTHR13763 EMBL:Z66495
RefSeq:NP_001254881.1 ProteinModelPortal:B6VQ60 SMR:B6VQ60
IntAct:B6VQ60 STRING:B6VQ60 PaxDb:B6VQ60 EnsemblMetazoa:C36A4.8a
GeneID:175499 KEGG:cel:CELE_C36A4.8 CTD:175499 WormBase:C36A4.8a
GeneTree:ENSGT00530000068746 HOGENOM:HOG000199539 OMA:LDKRSCR
ArrayExpress:B6VQ60 Uniprot:B6VQ60
Length = 612
Score = 105 (42.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 16 EEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR-KCPKCNA 67
E + ++ L C C KD +L+ CFH+FC C+ +E +++ +CP C +
Sbjct: 10 ETVARLQKELKCGICCSTYKDPILSTCFHIFCRSCINACFERKRKVQCPICRS 62
>UNIPROTKB|B6VQ60 [details] [associations]
symbol:brc-1 "Protein BRC-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 InterPro:IPR001357 Prosite:PS00518 GO:GO:0006915
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907 GO:GO:0006289
GO:GO:0031436 GO:GO:0051307 eggNOG:NOG274496 PANTHER:PTHR13763
EMBL:Z66495 RefSeq:NP_001254881.1 ProteinModelPortal:B6VQ60
SMR:B6VQ60 IntAct:B6VQ60 STRING:B6VQ60 PaxDb:B6VQ60
EnsemblMetazoa:C36A4.8a GeneID:175499 KEGG:cel:CELE_C36A4.8
CTD:175499 WormBase:C36A4.8a GeneTree:ENSGT00530000068746
HOGENOM:HOG000199539 OMA:LDKRSCR ArrayExpress:B6VQ60 Uniprot:B6VQ60
Length = 612
Score = 105 (42.0 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 16 EEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR-KCPKCNA 67
E + ++ L C C KD +L+ CFH+FC C+ +E +++ +CP C +
Sbjct: 10 ETVARLQKELKCGICCSTYKDPILSTCFHIFCRSCINACFERKRKVQCPICRS 62
>UNIPROTKB|F1RWB4 [details] [associations]
symbol:LOC100737099 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000009702 OMA:KISGHES Uniprot:F1RWB4
Length = 440
Score = 85 (35.0 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 26 TCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKC 65
+CP C +D V T C H FC CL R+E Q CP C
Sbjct: 12 SCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPVC 53
Score = 38 (18.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 62 CPKCNAAFGANDYH 75
CP+C + D+H
Sbjct: 113 CPQCQVSCDHQDHH 126
>FB|FBgn0032660 [details] [associations]
symbol:elfless "elfless" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
FlyBase:FBgn0032660 EMBL:BT072897 RefSeq:NP_001163003.1
RefSeq:NP_609860.2 UniGene:Dm.19846 SMR:Q9VJB0 IntAct:Q9VJB0
MINT:MINT-797819 STRING:Q9VJB0 EnsemblMetazoa:FBtr0302030
EnsemblMetazoa:FBtr0302031 GeneID:35076 KEGG:dme:Dmel_CG15150
UCSC:CG15150-RA CTD:35076 eggNOG:NOG319336 InParanoid:Q9VJB0
OrthoDB:EOG4FXPR8 GenomeRNAi:35076 NextBio:791733 Uniprot:Q9VJB0
Length = 229
Score = 98 (39.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 16 EEIREYKETLTCPSC--KVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAND 73
EE ++ CP C V+ K V T C HVFC C++ +T R CP C +
Sbjct: 167 EESKKSVLPYNCPVCLEDVREKLPVSTNCGHVFCKACIKRAVDTG-RVCPLCGV--DEPE 223
Query: 74 YHRLYL 79
+HR++L
Sbjct: 224 FHRIFL 229
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 105 (42.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++ + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 123 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 174
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 105 (42.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 14 MLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++ + CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 127 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 178
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
+E++R E +CP C A +T+C H+FCW C+ ++ KCP C ++
Sbjct: 5 VEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVH 64
Query: 71 AND 73
D
Sbjct: 65 KKD 67
>MGI|MGI:2684988 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10"
species:10090 "Mus musculus" [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005779
"integral to peroxisomal membrane" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
MGI:MGI:2684988 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
EMBL:CH466594 InterPro:IPR017907 EMBL:AL670413 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
HOGENOM:HOG000180194 HOVERGEN:HBG053568 EMBL:BC147304 EMBL:BC147305
IPI:IPI00676835 RefSeq:NP_001035866.1 UniGene:Mm.133114
ProteinModelPortal:B1AUE5 SMR:B1AUE5 STRING:B1AUE5 PaxDb:B1AUE5
PRIDE:B1AUE5 Ensembl:ENSMUST00000103180 GeneID:668173
KEGG:mmu:668173 UCSC:uc008wcs.1 GeneTree:ENSGT00510000048446
InParanoid:B1AUE5 OrthoDB:EOG4TB4C1 NextBio:434205 Bgee:B1AUE5
Genevestigator:B1AUE5 Uniprot:B1AUE5
Length = 324
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 17 EIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
E R T C C +R+ + T C H+FCW+C+ T + + +CP C F
Sbjct: 261 EDRAVCRTPLCTLCLEERRHSTATPCGHLFCWECI-TEWCNTKTECPLCREKF 312
>UNIPROTKB|E1BST1 [details] [associations]
symbol:PEX10 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350
Pfam:PF04757 CTD:5192 GeneTree:ENSGT00510000048446
EMBL:AADN02040876 IPI:IPI00596417 RefSeq:NP_001185583.1
UniGene:Gga.7879 ProteinModelPortal:E1BST1
Ensembl:ENSGALT00000001855 GeneID:419396 KEGG:gga:419396
NextBio:20822455 Uniprot:E1BST1
Length = 327
Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
C C +R+ A T C H+FCW+C+ TR +CP C F
Sbjct: 273 CTLCLEERRHATATPCGHLFCWECITEWCNTRT-ECPLCREKF 314
>UNIPROTKB|Q28H21 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
CTD:84759 KO:K11487 EMBL:CR761098 RefSeq:NP_001016417.2
UniGene:Str.20413 ProteinModelPortal:Q28H21 SMR:Q28H21
GeneID:549171 KEGG:xtr:549171 Xenbase:XB-GENE-6454077
Uniprot:Q28H21
Length = 259
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+EV+ +I+E E + C C DA +T+C H FC C+ +Y + CP CN
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCI-VKYLQTSKYCPLCN 84
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+EV+ +I+E E + C C DA +T+C H FC C+ +Y + CP CN
Sbjct: 29 EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCI-VKYLQTSKYCPLCN 84
>UNIPROTKB|I3LP53 [details] [associations]
symbol:LOC100621782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003356978.1
Ensembl:ENSSSCT00000028301 GeneID:100621782 KEGG:ssc:100621782
OMA:ESIHIRY Uniprot:I3LP53
Length = 460
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRK--CPKC 65
ET +CP C +D V T C H FC C+ R+E Q CP C
Sbjct: 13 ET-SCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPVC 56
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 62 CPKCNAAFGANDYH 75
CP+C + D+H
Sbjct: 116 CPQCQVSCDHQDHH 129
>UNIPROTKB|F1NLH3 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AADN02014962 IPI:IPI00683734
Ensembl:ENSGALT00000032038 Uniprot:F1NLH3
Length = 196
Score = 95 (38.5 bits), Expect = 0.00013, P = 0.00013
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 2 KKIEQAGTLDEVMLEEIREYKETLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTR 54
K + G L++ T++CP C ++ + ++ TKC HVFC CLR
Sbjct: 113 KVSRELGPLEDETASSNTRPSGTVSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDS 172
Query: 55 YETRQRKCPKCNAAFGANDYHRLYL 79
CP C YH +Y+
Sbjct: 173 LRNAN-SCPTCRKKLTHRQYHPIYI 196
>DICTYBASE|DDB_G0269614 [details] [associations]
symbol:DDB_G0269614 "tetratricopeptide-like helical
domain-containing protein (TPR)" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 dictyBase:DDB_G0269614 Pfam:PF00097 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0045335 GO:GO:0046872 GO:GO:0008270
eggNOG:COG0457 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR017907 RefSeq:XP_646116.5 ProteinModelPortal:Q55DL5
EnsemblProtists:DDB0237971 GeneID:8617065 KEGG:ddi:DDB_G0269614
OMA:FTIRAIC Uniprot:Q55DL5
Length = 436
Score = 101 (40.6 bits), Expect = 0.00013, P = 0.00013
Identities = 22/52 (42%), Positives = 26/52 (50%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+ EI E L+CP C DA T C H FC CL + E R KCP C+
Sbjct: 1 MSEILIDSELLSCPICADTFVDACDTGCGHTFCDFCLNSCLENRPDKCPVCS 52
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRT--RYETRQRKCPKCNA 67
C C ++ ++T C H+FCW CL Y ++ CP C A
Sbjct: 19 CNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKA 61
>UNIPROTKB|O60683 [details] [associations]
symbol:PEX10 "Peroxisome biogenesis factor 10" species:9606
"Homo sapiens" [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA;NAS]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 GO:GO:0005777
GO:GO:0046872 GO:GO:0008270 GO:GO:0005779 EMBL:CH471183
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 Orphanet:912 eggNOG:COG5574 KO:K13346
OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 EMBL:AF060502
EMBL:AB013818 EMBL:AK124816 EMBL:AL513477 EMBL:BC000543
EMBL:BC018198 IPI:IPI00031033 IPI:IPI00220987 RefSeq:NP_002608.1
RefSeq:NP_722540.1 UniGene:Hs.732228 ProteinModelPortal:O60683
SMR:O60683 IntAct:O60683 STRING:O60683 TCDB:3.A.20.1.1
PhosphoSite:O60683 PaxDb:O60683 PRIDE:O60683 DNASU:5192
Ensembl:ENST00000288774 Ensembl:ENST00000447513 GeneID:5192
KEGG:hsa:5192 UCSC:uc001ajg.3 UCSC:uc001ajh.3 CTD:5192
GeneCards:GC01M002368 HGNC:HGNC:8851 MIM:602859 MIM:614870
MIM:614871 neXtProt:NX_O60683 Orphanet:247815 Orphanet:772
Orphanet:44 PharmGKB:PA33193 HOGENOM:HOG000180194
HOVERGEN:HBG053568 InParanoid:O60683 GenomeRNAi:5192 NextBio:20080
ArrayExpress:O60683 Bgee:O60683 CleanEx:HS_PEX10
Genevestigator:O60683 GermOnline:ENSG00000157911 Uniprot:O60683
Length = 326
Score = 99 (39.9 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
LEE R C C +R+ T C H+FCW+C+ T + + + +CP C F
Sbjct: 262 LEE-RAVSRNPLCTLCLEERRHPTATPCGHLFCWECI-TAWCSSKAECPLCREKF 314
>UNIPROTKB|Q8HXW8 [details] [associations]
symbol:PEX10 "Peroxisome biogenesis factor 10" species:9541
"Macaca fascicularis" [GO:0005779 "integral to peroxisomal
membrane" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0008022 GO:GO:0016558 InterPro:IPR017907 PANTHER:PTHR23350
Pfam:PF04757 HOVERGEN:HBG053568 EMBL:AB083323
ProteinModelPortal:Q8HXW8 Uniprot:Q8HXW8
Length = 326
Score = 99 (39.9 bits), Expect = 0.00014, P = 0.00014
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
LEE R C C +R+ T C H+FCW+C+ T + + + +CP C F
Sbjct: 262 LEE-RAVSRNPLCTLCLEERRHPTATPCGHLFCWECI-TAWCSSKAECPLCREKF 314
>ZFIN|ZDB-GENE-081030-9 [details] [associations]
symbol:trim35-35 "tripartite motif containing 35-35"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-9 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00801454 RefSeq:XP_003201191.1
Ensembl:ENSDART00000074139 GeneID:100534748 KEGG:dre:100534748
Uniprot:F1QZ49
Length = 450
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ-RKCPKCNAAFGAND 73
+ + EY LTCP C+ K VL C H FC +CL+ + ++ ++CP C + D
Sbjct: 1 MSSLTEYD--LTCPVCQDIFKTPVLLSCSHSFCKECLQQFWISKNTQECPVCRRR-SSKD 57
Query: 74 YHRLYLG 80
Y + LG
Sbjct: 58 YPPINLG 64
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 12 EVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
E L + E ++C CK DA +T+C H FC C+ +E R CPKCN
Sbjct: 108 EERLLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEHSNR-CPKCN 162
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
CP C ++A +TKC H FC+ C+ E R CPKCN
Sbjct: 138 CPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 176
>ASPGD|ASPL0000031617 [details] [associations]
symbol:AN10707 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 Prosite:PS00518 GO:GO:0005524 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:BN001305 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:HTWGVSG
EnsemblFungi:CADANIAT00003281 HOGENOM:HOG000181800 Uniprot:C8VFF9
Length = 1415
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRL 77
C C+ + VLT C H +C DCLR + + R CP C GAND++++
Sbjct: 1067 CIICQGTFEIGVLTVCGHKYCKDCLRLWWR-QHRTCPVCKKRLGANDFYQI 1116
>UNIPROTKB|H0YFN9 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055 ChiTaRS:RNF10
Ensembl:ENST00000542207 Uniprot:H0YFN9
Length = 183
Score = 93 (37.8 bits), Expect = 0.00017, P = 0.00017
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
+E++R E +CP C A +T+C H+FCW C+ ++ KCP C ++
Sbjct: 10 VEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVH 69
Query: 71 AND 73
D
Sbjct: 70 KKD 72
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 100 (40.3 bits), Expect = 0.00019, P = 0.00019
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 12 EVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
+ +LE ++ K+TL CP C + T C H +C++CL + + CP C
Sbjct: 70 KTLLETFQKIKKTLECPICTEALQRPFTTHCGHTYCYECL-LNWLKESKSCPTC 122
>UNIPROTKB|F1ND52 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AADN02014962 IPI:IPI00578455 Ensembl:ENSGALT00000025265
Uniprot:F1ND52
Length = 190
Score = 93 (37.8 bits), Expect = 0.00019, P = 0.00019
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ TKC HVFC CLR CP C YH
Sbjct: 129 TVSCPICMDGYSEIVQSGRLIVSTKCGHVFCSQCLRDSLRNAN-SCPTCRKKLTHRQYHP 187
Query: 77 LYL 79
+Y+
Sbjct: 188 IYI 190
>ZFIN|ZDB-GENE-060421-7499 [details] [associations]
symbol:zgc:136767 "zgc:136767" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060421-7499 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOVERGEN:HBG106887 EMBL:BC115258 IPI:IPI00758686
RefSeq:NP_001035457.1 UniGene:Dr.153696 ProteinModelPortal:Q1RLW2
GeneID:678620 KEGG:dre:678620 NextBio:20902439 Uniprot:Q1RLW2
Length = 356
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRY-ETRQRKCPKC 65
E LTCP C+ KD + C H +C +CL++ + T ++CP C
Sbjct: 7 EDLTCPVCQEIFKDPFVLTCKHKYCTECLQSFWINTESKRCPLC 50
>UNIPROTKB|E9PMW8 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001594 PROSITE:PS50089
PROSITE:PS50216 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736 EMBL:AL513329
EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2 IPI:IPI00979234
ProteinModelPortal:E9PMW8 SMR:E9PMW8 Ensembl:ENST00000491600
ArrayExpress:E9PMW8 Bgee:E9PMW8 Uniprot:E9PMW8
Length = 68
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 35 KDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++A +TKC H FC+ C+ E R CPKCN
Sbjct: 3 EEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 33
>UNIPROTKB|Q90X95 [details] [associations]
symbol:bard1 "BRCA1-associated RING domain protein"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184
SMART:SM00248 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 CTD:580 HOVERGEN:HBG050662 KO:K10683 HSSP:Q99728
EMBL:AF416869 RefSeq:NP_001082131.1 UniGene:Xl.12056
ProteinModelPortal:Q90X95 SMR:Q90X95 IntAct:Q90X95 GeneID:398242
KEGG:xla:398242 Xenbase:XB-GENE-492039 Uniprot:Q90X95
Length = 772
Score = 102 (41.0 bits), Expect = 0.00022, P = 0.00022
Identities = 22/59 (37%), Positives = 27/59 (45%)
Query: 16 EEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAND 73
+ +RE + L C C KD V L C HVFCW C+ E +CP CN D
Sbjct: 33 DALREMERKLCCSKCMFILKDPVCLGGCEHVFCWTCVN---ENLGNECPLCNTPAWVRD 88
>RGD|1591776 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO;IDA] [GO:0005779 "integral to peroxisomal
membrane" evidence=IEA;ISO] [GO:0007031 "peroxisome organization"
evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
RGD:1591776 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 EMBL:CH473968 KO:K13346
PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 OrthoDB:EOG4TB4C1 IPI:IPI00359803
RefSeq:NP_001102875.1 UniGene:Rn.111 Ensembl:ENSRNOT00000036819
GeneID:680424 KEGG:rno:680424 NextBio:718678 Uniprot:D3ZC81
Length = 324
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
C C +R+ + T C H+FCW+C+ T + + +CP C F
Sbjct: 271 CTLCLEERRHSTATPCGHLFCWECI-TEWCNTKTECPLCREKF 312
>UNIPROTKB|E2R2P8 [details] [associations]
symbol:PEX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016558 "protein import into peroxisome
matrix" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 PANTHER:PTHR23350 Pfam:PF04757
ProteinModelPortal:E2R2P8 Ensembl:ENSCAFT00000030837
NextBio:20862768 Uniprot:E2R2P8
Length = 326
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
C C +R+ + T C H+FCW+C+ T++ + +CP C F
Sbjct: 273 CTLCLEERRHSTATPCGHLFCWECI-TQWCDTKTECPLCREKF 314
>FB|FBgn0034312 [details] [associations]
symbol:CG10916 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE013599
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000064431 InterPro:IPR006616 InterPro:IPR024518
Pfam:PF11901 SMART:SM00696 EMBL:AY061504 RefSeq:NP_611303.1
UniGene:Dm.683 SMR:Q7K1R6 EnsemblMetazoa:FBtr0086749
EnsemblMetazoa:FBtr0332853 GeneID:37081 KEGG:dme:Dmel_CG10916
UCSC:CG10916-RA FlyBase:FBgn0034312 eggNOG:NOG255899
InParanoid:Q7K1R6 OMA:CGICNEF OrthoDB:EOG4P2NJ3 GenomeRNAi:37081
NextBio:801859 Uniprot:Q7K1R6
Length = 263
Score = 95 (38.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 25 LTCPSCK--VKRKDAVLT--KCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRLYL 79
+ C C + D + + +C HVF DCL TR+ R R CP+C HRLYL
Sbjct: 30 ILCAICNEFFRANDIIFSTSRCGHVFHKDCL-TRWLNRSRTCPQCRDPCDRRRVHRLYL 87
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 96 (38.9 bits), Expect = 0.00026, P = 0.00026
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>TAIR|locus:2185088 [details] [associations]
symbol:AT5G01960 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 InterPro:IPR017907
eggNOG:NOG329292 HOGENOM:HOG000237544 EMBL:AY099711 EMBL:BT000282
IPI:IPI00535670 RefSeq:NP_568096.1 UniGene:At.48970
UniGene:At.71061 ProteinModelPortal:Q8L610 SMR:Q8L610 PaxDb:Q8L610
PRIDE:Q8L610 EnsemblPlants:AT5G01960.1 GeneID:831906
KEGG:ath:AT5G01960 TAIR:At5g01960 InParanoid:Q8L610 OMA:FSTKDRC
PhylomeDB:Q8L610 ProtClustDB:CLSN2689405 ArrayExpress:Q8L610
Genevestigator:Q8L610 Uniprot:Q8L610
Length = 426
Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNA 67
C C+ K +L +C H+FC DC+ +E R+R CP C A
Sbjct: 365 CAICQEKMHTPILLRCKHMFCEDCVSEWFE-RERTCPLCRA 404
>ZFIN|ZDB-GENE-071004-80 [details] [associations]
symbol:zgc:171260 "zgc:171260" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-071004-80
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG285726 HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8
EMBL:BC152517 IPI:IPI00998622 RefSeq:NP_001103307.1
UniGene:Dr.152815 ProteinModelPortal:A7MD79 GeneID:100126109
KEGG:dre:100126109 HOVERGEN:HBG106887 NextBio:20788971
Uniprot:A7MD79
Length = 452
Score = 98 (39.6 bits), Expect = 0.00029, P = 0.00029
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ-RKCPKCNAAFGAND 73
+ + EY LTCP C+ K VL C H FC +CL+ + ++ ++CP C + D
Sbjct: 1 MSSLTEYD--LTCPVCQDIFKTPVLLSCSHSFCKECLQQFWRSKNTQECPVCRRR-SSKD 57
Query: 74 Y 74
Y
Sbjct: 58 Y 58
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 96 (38.9 bits), Expect = 0.00031, P = 0.00031
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 43 RSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC 90
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 96 (38.9 bits), Expect = 0.00031, P = 0.00031
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 39 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 86
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 93 (37.8 bits), Expect = 0.00033, P = 0.00033
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 18 IREYKETLTCPSCK-VKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
+R++ +TC C+ K +T+C H FC C+ +E +CP+C
Sbjct: 9 VRDFNRYITCSICRGYLIKPTAVTECLHTFCKSCIVQHFE-ESNECPEC 56
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 96 (38.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 11 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 96 (38.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 11 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 96 (38.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 11 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 96 (38.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 11 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 58
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 96 (38.9 bits), Expect = 0.00037, P = 0.00037
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 15 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 62
>UNIPROTKB|Q5D7I6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:121123 "Alouatta sara" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 HOVERGEN:HBG001357 EMBL:AY843511
ProteinModelPortal:Q5D7I6 SMR:Q5D7I6 GO:GO:0031664 Uniprot:Q5D7I6
Length = 551
Score = 98 (39.6 bits), Expect = 0.00038, P = 0.00038
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRY-ETRQRKCPKCNAAF 69
KE +TCP C + + C H FC C+ + E+R+R CP C ++
Sbjct: 10 KEEVTCPICLELLTEPLSLDCGHSFCQACITANHKESRERSCPLCRVSY 58
>ZFIN|ZDB-GENE-050522-333 [details] [associations]
symbol:trim35-7 "tripartite motif containing 35-7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-050522-333 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:KOG2177
HOVERGEN:HBG106887 EMBL:BC095803 IPI:IPI00504444
RefSeq:NP_001018533.1 UniGene:Dr.114161 ProteinModelPortal:Q501Z3
GeneID:553726 KEGG:dre:553726 CTD:553726 InParanoid:Q501Z3
OrthoDB:EOG4TQM98 NextBio:20880455 Uniprot:Q501Z3
Length = 460
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYET-RQRKCPKC 65
+E L+CP C+ KD V+ C H FC +CL+ + T R ++C C
Sbjct: 13 EEDLSCPVCQEVFKDPVILSCSHSFCRECLQHFWRTQRTQQCAVC 57
>UNIPROTKB|G4N9U7 [details] [associations]
symbol:MGG_03256 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR008974
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CM001234
SUPFAM:SSF49599 RefSeq:XP_003716718.1 ProteinModelPortal:G4N9U7
EnsemblFungi:MGG_03256T0 GeneID:2676587 KEGG:mgr:MGG_03256
Uniprot:G4N9U7
Length = 557
Score = 98 (39.6 bits), Expect = 0.00039, P = 0.00039
Identities = 23/68 (33%), Positives = 32/68 (47%)
Query: 9 TLDEVMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAA 68
+LD LE + E + L CP C+ V+T+C HVFC C E + CP +
Sbjct: 79 SLDWPALEYVGEVSQNLWCPICQAPLVLPVVTRCGHVFCSGCFDGLLEHSNKCCPLDRKS 138
Query: 69 FGANDYHR 76
F + D R
Sbjct: 139 F-SRDLER 145
>ZFIN|ZDB-GENE-041008-246 [details] [associations]
symbol:im:7142942 "im:7142942" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-041008-246 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000010318 EMBL:BX004830
IPI:IPI00613625 RefSeq:XP_001331980.1 RefSeq:XP_683428.1
UniGene:Dr.107727 Ensembl:ENSDART00000123145 GeneID:557319
KEGG:dre:557319 NextBio:20881936 Uniprot:E7EXS0
Length = 184
Score = 90 (36.7 bits), Expect = 0.00040, P = 0.00040
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 38 VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHRLYL 79
V TKC H+FC C+R +R CP C YH +Y+
Sbjct: 144 VSTKCGHLFCSQCIRDSL-SRAHSCPTCRKKLTHKQYHPIYI 184
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 96 (38.9 bits), Expect = 0.00041, P = 0.00041
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K+ + TK C H FC DC+ T + ++CP C
Sbjct: 40 RSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTC 87
>UNIPROTKB|E2RE60 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0045892 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 CTD:84108 KO:K11470 EMBL:AAEX03015497
EMBL:AAEX03015496 RefSeq:XP_852021.1 ProteinModelPortal:E2RE60
Ensembl:ENSCAFT00000016498 GeneID:609633 KEGG:cfa:609633
NextBio:20895222 Uniprot:E2RE60
Length = 349
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 117 EEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 172
>UNIPROTKB|Q9BYE7 [details] [associations]
symbol:PCGF6 "Polycomb group RING finger protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IDA;TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
EMBL:AB047006 Pfam:PF00097 Prosite:PS00518 GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL591408
InterPro:IPR017907 HOVERGEN:HBG052826 GO:GO:0035102
HOGENOM:HOG000231946 EMBL:AK027885 EMBL:AK290679 EMBL:BC007602
EMBL:BC010235 IPI:IPI00030334 IPI:IPI00063571 RefSeq:NP_001011663.1
RefSeq:NP_115530.2 UniGene:Hs.741474 PDB:2DJB PDBsum:2DJB
ProteinModelPortal:Q9BYE7 SMR:Q9BYE7 DIP:DIP-50946N IntAct:Q9BYE7
STRING:Q9BYE7 PhosphoSite:Q9BYE7 DMDM:116242703 PRIDE:Q9BYE7
DNASU:84108 Ensembl:ENST00000337211 Ensembl:ENST00000369847
GeneID:84108 KEGG:hsa:84108 UCSC:uc001kwt.3 UCSC:uc001kwu.3
CTD:84108 GeneCards:GC10M105053 H-InvDB:HIX0014963 HGNC:HGNC:21156
MIM:607816 neXtProt:NX_Q9BYE7 PharmGKB:PA134887110 eggNOG:NOG286828
InParanoid:Q9BYE7 KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD
PhylomeDB:Q9BYE7 EvolutionaryTrace:Q9BYE7 GenomeRNAi:84108
NextBio:73375 Bgee:Q9BYE7 CleanEx:HS_PCGF6 Genevestigator:Q9BYE7
GermOnline:ENSG00000156374 Uniprot:Q9BYE7
Length = 350
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 118 EEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 173
>UNIPROTKB|E1BJL2 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 CTD:84108 KO:K11470 OMA:IGANEDT
EMBL:DAAA02059034 EMBL:DAAA02059035 IPI:IPI00710365
RefSeq:NP_001192549.1 UniGene:Bt.42279 ProteinModelPortal:E1BJL2
Ensembl:ENSBTAT00000013026 GeneID:507739 KEGG:bta:507739
NextBio:20868204 Uniprot:E1BJL2
Length = 351
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 119 EEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 174
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 91 (37.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 20 EYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
E E L CP C K+ ++KC H FC+ C+ ++ + CP C
Sbjct: 149 EVDELLLCPVCNDMIKEPFISKCGHSFCYQCIIIHL-SKSKTCPIC 193
Score = 33 (16.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 62 CPKCNAAFGANDYHRLY 78
C AFG+ D+H Y
Sbjct: 811 CSSNLIAFGSADHHIHY 827
>UNIPROTKB|E9PJB5 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
IPI:IPI00980524 ProteinModelPortal:E9PJB5 SMR:E9PJB5
Ensembl:ENST00000498306 ArrayExpress:E9PJB5 Bgee:E9PJB5
Uniprot:E9PJB5
Length = 189
Score = 90 (36.7 bits), Expect = 0.00043, P = 0.00043
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 35 KDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
++A +TKC H FC+ C+ E R CPKCN
Sbjct: 3 EEAYMTKCGHSFCYKCIHQSLEDNNR-CPKCN 33
>RGD|1549782 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA;ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 92 (37.4 bits), Expect = 0.00047, P = 0.00047
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 12 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 69
Query: 62 CPKCN 66
CP CN
Sbjct: 70 CPMCN 74
>UNIPROTKB|Q6DLV9 [details] [associations]
symbol:Pcgf1 "Polycomb group RING finger protein 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 92 (37.4 bits), Expect = 0.00047, P = 0.00047
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 12 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 69
Query: 62 CPKCN 66
CP CN
Sbjct: 70 CPMCN 74
>ZFIN|ZDB-GENE-060503-295 [details] [associations]
symbol:trim35-23 "tripartite motif containing
35-23" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-295 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 IPI:IPI00610029 RefSeq:NP_001038426.1
UniGene:Dr.74108 Ensembl:ENSDART00000140268 GeneID:561453
KEGG:dre:561453 OMA:ALINTSH NextBio:20883935 Uniprot:Q1MT10
Length = 451
Score = 96 (38.9 bits), Expect = 0.00048, P = 0.00048
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ-RKCPKC 65
E L+CP C K+ VL C H FC +CL+ + T++ ++CP C
Sbjct: 9 EELSCPVCCEIFKNPVLLSCSHSFCKECLQQFWRTKKTQECPVC 52
>UNIPROTKB|J9P0C4 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015497 EMBL:AAEX03015496
Ensembl:ENSCAFT00000044220 OMA:WAGRSHY Uniprot:J9P0C4
Length = 383
Score = 95 (38.5 bits), Expect = 0.00048, P = 0.00048
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 117 EEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 172
>ZFIN|ZDB-GENE-070705-22 [details] [associations]
symbol:si:ch211-121a2.3 "si:ch211-121a2.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070705-22 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:BX511260
GeneTree:ENSGT00670000097622 IPI:IPI00855283
Ensembl:ENSDART00000043248 Uniprot:F1Q4M8
Length = 562
Score = 97 (39.2 bits), Expect = 0.00050, P = 0.00050
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR-QRK---CPKCNAAF 69
+E +CP C +D V C H +C +C+++ +E + QRK CP+C +F
Sbjct: 12 QEQFSCPICMDLLRDPVTIPCGHNYCMECIKSFWEQKSQRKLCSCPECRQSF 63
>ZFIN|ZDB-GENE-030616-605 [details] [associations]
symbol:pcgf1 "polycomb group ring finger 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-030616-605 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AL831789 IPI:IPI00482456
Ensembl:ENSDART00000129432 Bgee:F1R1I1 Uniprot:F1R1I1
Length = 295
Score = 93 (37.8 bits), Expect = 0.00052, P = 0.00052
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 56 KLDPLRNEEEVKIK-IKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCI-VKYLQTSKY 113
Query: 62 CPKCN 66
CP CN
Sbjct: 114 CPMCN 118
>UNIPROTKB|F1MM90 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 GeneTree:ENSGT00550000074463
IPI:IPI00687683 OMA:NEHIVCY EMBL:DAAA02030322
Ensembl:ENSBTAT00000022090 Uniprot:F1MM90
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>UNIPROTKB|Q2YDF9 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC110242 IPI:IPI00687683 RefSeq:NP_001039912.2
UniGene:Bt.52040 ProteinModelPortal:Q2YDF9 GeneID:539040
KEGG:bta:539040 CTD:84759 InParanoid:Q2YDF9 KO:K11487
OrthoDB:EOG4894N6 NextBio:20877740 Uniprot:Q2YDF9
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>UNIPROTKB|E2R984 [details] [associations]
symbol:PCGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
GeneTree:ENSGT00550000074463 CTD:84759 KO:K11487 OMA:NEHIVCY
EMBL:AAEX03010965 RefSeq:XP_532995.2 ProteinModelPortal:E2R984
Ensembl:ENSCAFT00000013424 GeneID:475785 KEGG:cfa:475785
Uniprot:E2R984
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>UNIPROTKB|Q9BSM1 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 HOVERGEN:HBG052826 EMBL:AC005041 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:84759 KO:K11487 OrthoDB:EOG4894N6
EMBL:AF087884 EMBL:BC004952 IPI:IPI00902987 IPI:IPI00921560
RefSeq:NP_116062.2 UniGene:Hs.316750 ProteinModelPortal:Q9BSM1
SMR:Q9BSM1 IntAct:Q9BSM1 MINT:MINT-1460887 STRING:Q9BSM1
PhosphoSite:Q9BSM1 DMDM:223590124 PRIDE:Q9BSM1 DNASU:84759
Ensembl:ENST00000233630 GeneID:84759 KEGG:hsa:84759 UCSC:uc002sly.3
GeneCards:GC02M074732 HGNC:HGNC:17615 HPA:HPA011356 MIM:610231
neXtProt:NX_Q9BSM1 PharmGKB:PA134976631 InParanoid:Q9BSM1
OMA:NEHIVCY ChiTaRS:PCGF1 GenomeRNAi:84759 NextBio:74901
Bgee:Q9BSM1 CleanEx:HS_PCGF1 Genevestigator:Q9BSM1 Uniprot:Q9BSM1
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>MGI|MGI:1917087 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1917087 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AC104324 eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759
KO:K11487 OrthoDB:EOG4894N6 OMA:NEHIVCY EMBL:BC028560
IPI:IPI00153112 RefSeq:NP_932109.1 UniGene:Mm.12261
ProteinModelPortal:Q8R023 SMR:Q8R023 IntAct:Q8R023 STRING:Q8R023
PhosphoSite:Q8R023 PRIDE:Q8R023 Ensembl:ENSMUST00000092614
Ensembl:ENSMUST00000165164 GeneID:69837 KEGG:mmu:69837
UCSC:uc009cmg.1 InParanoid:Q8R023 NextBio:330455 Bgee:Q8R023
CleanEx:MM_PCGF1 Genevestigator:Q8R023 Uniprot:Q8R023
Length = 259
Score = 92 (37.4 bits), Expect = 0.00053, P = 0.00053
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRK 61
K++ +EV ++ I++ E + C C DA +T+C H FC C+ +Y +
Sbjct: 24 KMDPLRNEEEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKY 81
Query: 62 CPKCN 66
CP CN
Sbjct: 82 CPMCN 86
>MGI|MGI:2135752 [details] [associations]
symbol:Dtx3 "deltex 3 homolog (Drosophila)" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IDA;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2135752 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0007219 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG84763 HOGENOM:HOG000007352 KO:K06058
GeneTree:ENSGT00440000035370 CTD:196403 HOVERGEN:HBG045495
EMBL:AB015425 EMBL:BC099687 EMBL:BC138304 EMBL:BC157899
IPI:IPI00330413 RefSeq:NP_109639.1 UniGene:Mm.271724
ProteinModelPortal:Q80V91 SMR:Q80V91 STRING:Q80V91
PhosphoSite:Q80V91 PaxDb:Q80V91 PRIDE:Q80V91
Ensembl:ENSMUST00000038217 GeneID:80904 KEGG:mmu:80904
UCSC:uc007hil.1 ChiTaRS:DTX3 NextBio:350250 Bgee:Q80V91
CleanEx:MM_DTX3 Genevestigator:Q80V91 GermOnline:ENSMUSG00000040415
Uniprot:Q80V91
Length = 347
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 15 LEEIREYKETLTCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
L E E +ET TCP C + ++A L KC H FC C+ TR ++ CP C +G
Sbjct: 153 LREDAEEQET-TCPICLGEIQNAKTLEKCRHSFCEGCI-TRALQVKKACPMCGRFYG 207
>UNIPROTKB|F1LY78 [details] [associations]
symbol:Dtx3 "Protein Dtx3" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00440000035370
IPI:IPI00991273 ProteinModelPortal:F1LY78
Ensembl:ENSRNOT00000006815 ArrayExpress:F1LY78 Uniprot:F1LY78
Length = 347
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 15 LEEIREYKETLTCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
L E E +ET TCP C + ++A L KC H FC C+ TR ++ CP C +G
Sbjct: 153 LREDAEEQET-TCPICLGEIQNAKTLEKCRHSFCEGCI-TRALQVKKACPMCGRFYG 207
>UNIPROTKB|F5H1U2 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0015630 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL110117 EMBL:AL645924 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 HGNC:HGNC:10067 ChiTaRS:RNF4 IPI:IPI01012670
ProteinModelPortal:F5H1U2 SMR:F5H1U2 Ensembl:ENST00000541204
PhylomeDB:F5H1U2 ArrayExpress:F5H1U2 Bgee:F5H1U2 Uniprot:F5H1U2
Length = 190
Score = 89 (36.4 bits), Expect = 0.00057, P = 0.00057
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRYHP 187
Query: 77 LYL 79
+Y+
Sbjct: 188 IYI 190
>UNIPROTKB|P78317 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0033142
"progesterone receptor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0050681
"androgen receptor binding" evidence=NAS] [GO:0030521 "androgen
receptor signaling pathway" evidence=NAS] [GO:0090234 "regulation
of kinetochore assembly" evidence=IMP] [GO:0090169 "regulation of
spindle assembly" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISS] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISS] [GO:0085020 "protein K6-linked ubiquitination"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0031491
"nucleosome binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032184 "SUMO polymer binding" evidence=ISS] [GO:0016605 "PML
body" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0030521 GO:GO:0043161 GO:GO:0015630 GO:GO:0046685
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0070979
GO:GO:0050681 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184
EMBL:AL110117 EMBL:AL645924 EMBL:AB000468 EMBL:U95140 EMBL:AK128038
EMBL:AK309509 EMBL:AK312534 EMBL:BX322586 EMBL:CR450722
EMBL:CR545473 EMBL:BC031935 IPI:IPI00297694 IPI:IPI00965645
RefSeq:NP_001171938.1 RefSeq:NP_001171939.1 RefSeq:NP_002929.1
UniGene:Hs.740360 PDB:2EA6 PDB:2XEU PDBsum:2EA6 PDBsum:2XEU
ProteinModelPortal:P78317 SMR:P78317 IntAct:P78317 MINT:MINT-271054
STRING:P78317 PhosphoSite:P78317 DMDM:18202358 PRIDE:P78317
DNASU:6047 Ensembl:ENST00000314289 Ensembl:ENST00000506706
Ensembl:ENST00000511600 Ensembl:ENST00000511859 GeneID:6047
KEGG:hsa:6047 UCSC:uc003gfb.3 CTD:6047 GeneCards:GC04P002463
HGNC:HGNC:10067 HPA:HPA049356 MIM:602850 neXtProt:NX_P78317
PharmGKB:PA34439 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 InParanoid:P78317 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 EvolutionaryTrace:P78317 GenomeRNAi:6047 NextBio:23561
ArrayExpress:P78317 Bgee:P78317 CleanEx:HS_RNF4
Genevestigator:P78317 GermOnline:ENSG00000063978 GO:GO:0090234
GO:GO:0090169 Uniprot:P78317
Length = 190
Score = 89 (36.4 bits), Expect = 0.00057, P = 0.00057
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRYHP 187
Query: 77 LYL 79
+Y+
Sbjct: 188 IYI 190
>UNIPROTKB|F1S8Q2 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:CU640885
Ensembl:ENSSSCT00000009507 ArrayExpress:F1S8Q2 Uniprot:F1S8Q2
Length = 190
Score = 89 (36.4 bits), Expect = 0.00057, P = 0.00057
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRYHP 187
Query: 77 LYL 79
+Y+
Sbjct: 188 IYI 190
>UNIPROTKB|J9NS55 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000044321
Uniprot:J9NS55
Length = 191
Score = 89 (36.4 bits), Expect = 0.00057, P = 0.00057
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 130 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDALKNANT-CPTCRKKINHKRYHP 188
Query: 77 LYL 79
+Y+
Sbjct: 189 IYI 191
>RGD|1559497 [details] [associations]
symbol:Trim65 "tripartite motif-containing 65" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 SMART:SM00184 RGD:1559497 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104271 CTD:201292 KO:K12031 OrthoDB:EOG4XD3R1
IPI:IPI00361535 RefSeq:NP_001129186.1 UniGene:Rn.29932
Ensembl:ENSRNOT00000046026 GeneID:303684 KEGG:rno:303684
OMA:CSHHERA NextBio:651886 Uniprot:D3ZY16
Length = 518
Score = 96 (38.9 bits), Expect = 0.00058, P = 0.00057
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
++ +TCP C + D V C H FC +C++ + ++ CP+C F
Sbjct: 8 EDLVTCPICLGRYCDPVTLPCGHTFCGNCIQDSWRCCEKICPECRQPF 55
>TAIR|locus:2050533 [details] [associations]
symbol:AT2G44410 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:BT011628 EMBL:BT012267 IPI:IPI00542531
RefSeq:NP_181969.2 UniGene:At.21385 ProteinModelPortal:Q6NLR3
SMR:Q6NLR3 EnsemblPlants:AT2G44410.1 GeneID:819048
KEGG:ath:AT2G44410 TAIR:At2g44410 HOGENOM:HOG000143348
InParanoid:Q6NLR3 OMA:RRTIDSI PhylomeDB:Q6NLR3
ProtClustDB:CLSN2918256 Genevestigator:Q6NLR3 Uniprot:Q6NLR3
Length = 413
Score = 84 (34.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDC---LRTRYETRQRKCPKCN 66
C C K +D +LT C H+FCW C L Y ++CP C+
Sbjct: 125 CNICLEKAEDPILTCCGHLFCWGCFYQLPLIY-LNIKECPVCD 166
Score = 30 (15.6 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 12 EVMLEEIREYKETLT 26
EV++ IRE + T T
Sbjct: 54 EVIVSRIREREITTT 68
>MGI|MGI:1201691 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=ISO] [GO:0032184 "SUMO polymer binding" evidence=ISO]
[GO:0033142 "progesterone receptor binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051865 "protein autoubiquitination" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO] [GO:0070979
"protein K11-linked ubiquitination" evidence=ISO] [GO:0085020
"protein K6-linked ubiquitination" evidence=ISO] [GO:0090169
"regulation of spindle assembly" evidence=ISO] [GO:0090234
"regulation of kinetochore assembly" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1201691 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0046685 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0070979 InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534
GO:GO:0031491 GO:GO:0051865 GO:GO:0085020 GO:GO:0032184 CTD:6047
eggNOG:NOG327779 HOVERGEN:HBG018577 OMA:THRQYHP OrthoDB:EOG4S4PHN
ChiTaRS:RNF4 GO:GO:0090234 GO:GO:0090169 EMBL:AF169300
EMBL:AK019171 EMBL:AK090162 EMBL:AK147057 EMBL:AK151116
EMBL:AK158987 EMBL:AK159778 EMBL:AK159949 EMBL:BC003282 EMBL:U95141
IPI:IPI00137942 RefSeq:NP_035408.1 UniGene:Mm.21281
ProteinModelPortal:Q9QZS2 SMR:Q9QZS2 STRING:Q9QZS2
PhosphoSite:Q9QZS2 PRIDE:Q9QZS2 Ensembl:ENSMUST00000030992
GeneID:19822 KEGG:mmu:19822 GeneTree:ENSGT00390000010318
InParanoid:Q9QZS2 NextBio:297289 PMAP-CutDB:Q9QZS2 Bgee:Q9QZS2
CleanEx:MM_RNF4 Genevestigator:Q9QZS2 GermOnline:ENSMUSG00000029110
Uniprot:Q9QZS2
Length = 194
Score = 89 (36.4 bits), Expect = 0.00060, P = 0.00060
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 133 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRYHP 191
Query: 77 LYL 79
+Y+
Sbjct: 192 IYI 194
>RGD|3583 [details] [associations]
symbol:Rnf4 "ring finger protein 4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=IMP] [GO:0016605 "PML body"
evidence=ISO;IDA] [GO:0017025 "TBP-class protein binding"
evidence=TAS] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IDA] [GO:0032184 "SUMO
polymer binding" evidence=IPI] [GO:0033142 "progesterone receptor
binding" evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS;IDA] [GO:0046685 "response to
arsenic-containing substance" evidence=ISO;IDA] [GO:0050681 "androgen
receptor binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IMP] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IDA] [GO:0085020 "protein K6-linked
ubiquitination" evidence=IDA] [GO:0090169 "regulation of spindle
assembly" evidence=ISO;ISS] [GO:0090234 "regulation of kinetochore
assembly" evidence=ISO;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:3583
Prosite:PS00518 GO:GO:0005737 GO:GO:0005654 GO:GO:0043161
GO:GO:0046685 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070979 GO:GO:0030331 InterPro:IPR017907
GO:GO:0070936 GO:GO:0070534 GO:GO:0031491 GO:GO:0051865 GO:GO:0085020
GO:GO:0017025 CTD:6047 eggNOG:NOG327779 HOGENOM:HOG000059548
HOVERGEN:HBG018577 OrthoDB:EOG4S4PHN GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:AF022081 EMBL:AY050655
EMBL:BC062024 IPI:IPI00213362 RefSeq:NP_062055.1 UniGene:Rn.30015
PDB:3NG2 PDB:4AP4 PDBsum:3NG2 PDBsum:4AP4 ProteinModelPortal:O88846
SMR:O88846 STRING:O88846 PhosphoSite:O88846 PRIDE:O88846
Ensembl:ENSRNOT00000019555 GeneID:29274 KEGG:rno:29274
InParanoid:O88846 EvolutionaryTrace:O88846 NextBio:608631
Genevestigator:O88846 GermOnline:ENSRNOG00000013930 Uniprot:O88846
Length = 194
Score = 89 (36.4 bits), Expect = 0.00060, P = 0.00060
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 133 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANT-CPTCRKKINHKRYHP 191
Query: 77 LYL 79
+Y+
Sbjct: 192 IYI 194
>UNIPROTKB|F1PF91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 OMA:THRQYHP
GeneTree:ENSGT00390000010318 EMBL:AAEX03002450 EMBL:AAEX03002451
Ensembl:ENSCAFT00000023584 Uniprot:F1PF91
Length = 195
Score = 89 (36.4 bits), Expect = 0.00061, P = 0.00061
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 134 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDALKNANT-CPTCRKKINHKRYHP 192
Query: 77 LYL 79
+Y+
Sbjct: 193 IYI 195
>ZFIN|ZDB-GENE-060503-673 [details] [associations]
symbol:trim35-21 "tripartite motif containing
35-21" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-673 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
HOVERGEN:HBG106887 EMBL:AL954363 IPI:IPI00619654
RefSeq:NP_001038429.1 UniGene:Dr.95926 Ensembl:ENSDART00000074102
GeneID:561579 KEGG:dre:561579 InParanoid:Q1MT06 OMA:NEKCSSA
NextBio:20883995 Uniprot:Q1MT06
Length = 451
Score = 95 (38.5 bits), Expect = 0.00061, P = 0.00061
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQ-RKCPKCNAA 68
E L+CP C K+ V+ C H FC +CL+ + T++ ++CP C ++
Sbjct: 9 EDLSCPVCCEIFKNPVVLSCSHSFCKECLQQFWRTKKTQECPVCRSS 55
>ZFIN|ZDB-GENE-030131-3306 [details] [associations]
symbol:hltf "helicase-like transcription factor"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271
Pfam:PF08797 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3306 GO:GO:0005524 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004386
InterPro:IPR017907 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 CTD:6596 HOVERGEN:HBG079192 KO:K15711 OMA:SNWIDQF
GeneTree:ENSGT00700000104586 HOGENOM:HOG000172619 OrthoDB:EOG47SSD6
EMBL:CR788256 IPI:IPI00500566 RefSeq:XP_693071.2 UniGene:Dr.105912
Ensembl:ENSDART00000099350 Ensembl:ENSDART00000132050 GeneID:564651
KEGG:dre:564651 NextBio:20885486 Uniprot:B0V118
Length = 942
Score = 87 (35.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRT--RYETRQRKCPKCNA 67
C C + V+T C HVFC C+ R E Q KCP C A
Sbjct: 697 CAICLDSLRQPVITYCAHVFCRPCICEVIRSEKEQAKCPLCRA 739
Score = 35 (17.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 3 KIEQAGTLDEVMLEEIREYKETLTCPSCKV 32
K + A T V+L + E+ L C S +V
Sbjct: 364 KKKSANTKKAVVLLDDVEFAAALECSSSQV 393
>RGD|1566181 [details] [associations]
symbol:Dtx3 "deltex homolog 3 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1566181
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0007219
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:GPQLCDS
IPI:IPI00779030 Ensembl:ENSRNOT00000057923 ArrayExpress:F1M4I9
Uniprot:F1M4I9
Length = 397
Score = 94 (38.1 bits), Expect = 0.00065, P = 0.00065
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 15 LEEIREYKETLTCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
L E E +ET TCP C + ++A L KC H FC C+ TR ++ CP C +G
Sbjct: 153 LREDAEEQET-TCPICLGEIQNAKTLEKCRHSFCEGCI-TRALQVKKACPMCGRFYG 207
>TAIR|locus:2064905 [details] [associations]
symbol:AT2G39100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.37212
InterPro:IPR017907 HSSP:P28990 eggNOG:NOG244178 EMBL:AY065197
EMBL:AY081521 IPI:IPI00536162 RefSeq:NP_850310.1 UniGene:At.20141
ProteinModelPortal:Q8VZ73 SMR:Q8VZ73 IntAct:Q8VZ73 PaxDb:Q8VZ73
PRIDE:Q8VZ73 EnsemblPlants:AT2G39100.1 GeneID:818496
KEGG:ath:AT2G39100 TAIR:At2g39100 HOGENOM:HOG000093087
InParanoid:Q8VZ73 OMA:FWHELRC PhylomeDB:Q8VZ73
ProtClustDB:CLSN2680124 Genevestigator:Q8VZ73 Uniprot:Q8VZ73
Length = 296
Score = 92 (37.4 bits), Expect = 0.00067, P = 0.00067
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 26 TCPSC----KVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
+CP C +R AV+T C H +C C+R ++ + +R CP CN F
Sbjct: 38 SCPICLENLTERRSAAVITVCKHGYCLACIR-KWSSFKRNCPLCNTRF 84
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 90 (36.7 bits), Expect = 0.00067, P = 0.00067
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRT--RYETRQRKCPKCNA 67
C C +D ++T C H+FCW CL + + ++CP C A
Sbjct: 28 CNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVCKA 70
>UNIPROTKB|F6RV66 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090234 "regulation of kinetochore assembly"
evidence=IEA] [GO:0090169 "regulation of spindle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0043161
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OMA:THRQYHP GO:GO:0090234 GO:GO:0090169
GeneTree:ENSGT00390000010318 EMBL:DAAA02018497 IPI:IPI00704748
Ensembl:ENSBTAT00000039422 Uniprot:F6RV66
Length = 186
Score = 88 (36.0 bits), Expect = 0.00069, P = 0.00069
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C H+FC CLR + CP C YH
Sbjct: 125 TVSCPICMDGYSEIVQNGRLIVSTECGHIFCSQCLRDSLKNANT-CPTCRKKMSHKRYHP 183
Query: 77 LYL 79
+Y+
Sbjct: 184 IYI 186
>RGD|1306904 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;ISS] [GO:0035102 "PRC1 complex"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
RGD:1306904 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:BC083820
IPI:IPI00361558 RefSeq:NP_001013172.1 UniGene:Rn.16897
ProteinModelPortal:Q5XI70 SMR:Q5XI70 PRIDE:Q5XI70
Ensembl:ENSRNOT00000027450 GeneID:309457 KEGG:rno:309457
UCSC:RGD:1306904 InParanoid:Q5XI70 NextBio:660834
Genevestigator:Q5XI70 GermOnline:ENSRNOG00000020250 Uniprot:Q5XI70
Length = 351
Score = 93 (37.8 bits), Expect = 0.00069, P = 0.00069
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 119 EEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 174
>MGI|MGI:1918291 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1918291
Pfam:PF00097 Prosite:PS00518 GO:GO:0019904 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:AB047007 EMBL:BC016195
EMBL:BC089460 IPI:IPI00118541 RefSeq:NP_081930.1 UniGene:Mm.35413
ProteinModelPortal:Q99NA9 SMR:Q99NA9 IntAct:Q99NA9 STRING:Q99NA9
PhosphoSite:Q99NA9 PRIDE:Q99NA9 Ensembl:ENSMUST00000026032
GeneID:71041 KEGG:mmu:71041 UCSC:uc008hul.1 InParanoid:Q99NA9
NextBio:332887 Bgee:Q99NA9 CleanEx:MM_PCGF6 Genevestigator:Q99NA9
GermOnline:ENSMUSG00000025050 Uniprot:Q99NA9
Length = 353
Score = 93 (37.8 bits), Expect = 0.00070, P = 0.00070
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+E L + E + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 121 EEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 176
>UNIPROTKB|J3QRK3 [details] [associations]
symbol:TRIM37 "E3 ubiquitin-protein ligase TRIM37"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC099850 EMBL:AC100832 HGNC:HGNC:7523 ChiTaRS:TRIM37
EMBL:AC005207 EMBL:AC036154 ProteinModelPortal:J3QRK3
Ensembl:ENST00000584889 Uniprot:J3QRK3
Length = 103
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 10 LDEVMLEEIREYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQR-KCPKCNA 67
+DE +E I E C C K +DA L C + C+ C+R R+ T QR +CP C A
Sbjct: 1 MDEQSVESIAE---VFRCFICMEKLRDARLCPHCSKLCCFSCIR-RWLTEQRAQCPHCRA 56
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 91 (37.1 bits), Expect = 0.00073, P = 0.00073
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 11 DEVMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+EV ++ I++ E + C C DA +T+C H FC C+ +Y + CP CN
Sbjct: 34 EEVRVK-IKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCI-VKYLQTSKYCPMCN 88
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 94 (38.1 bits), Expect = 0.00074, P = 0.00074
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 19 REYKETLTCPSCKVKRKDAVLTK-CFHVFCWDCLRTRYETRQRKCPKC 65
R L CP C K + TK C H FC DC+ T + ++CP C
Sbjct: 38 RSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTC 85
>ZFIN|ZDB-GENE-040718-482 [details] [associations]
symbol:zgc:92594 "zgc:92594" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-040718-482 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FP236812 GeneTree:ENSGT00690000102221
IPI:IPI00993075 Ensembl:ENSDART00000128137 ArrayExpress:F1R3Q1
Bgee:F1R3Q1 Uniprot:F1R3Q1
Length = 437
Score = 94 (38.1 bits), Expect = 0.00075, P = 0.00075
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 22 KETLTCPSCKVKRKDAVLTKCFHVFCWDCLRT---RYETRQRKCPKC 65
+E LTCP C +D L C H FC CLR R E + +CP+C
Sbjct: 12 EEELTCPVCLDLYRDPHLLPCGHNFCLQCLRRLKGRSERGRLRCPEC 58
>FB|FBgn0038125 [details] [associations]
symbol:CG8141 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 FlyBase:FBgn0038125 RefSeq:NP_731776.1
UniGene:Dm.12934 ProteinModelPortal:Q9VFY3 SMR:Q9VFY3 IntAct:Q9VFY3
MINT:MINT-290332 STRING:Q9VFY3 EnsemblMetazoa:FBtr0082734
GeneID:41622 KEGG:dme:Dmel_CG8141 UCSC:CG8141-RA InParanoid:Q9VFY3
OMA:GVITICG PhylomeDB:Q9VFY3 GenomeRNAi:41622 NextBio:824684
ArrayExpress:Q9VFY3 Bgee:Q9VFY3 Uniprot:Q9VFY3
Length = 239
Score = 90 (36.7 bits), Expect = 0.00075, P = 0.00075
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 27 CPSCKVKRKDAVLTKCFHVFCWDCLRTRYE-TRQRKCPKC 65
C C + V+T C H+FCW CL + T Q +CP C
Sbjct: 85 CNECNQYVRGGVITICGHLFCWTCLWPKLSGTAQPRCPCC 124
>UNIPROTKB|D6RBB0 [details] [associations]
symbol:PEX10 "Peroxisome biogenesis factor 10" species:9606
"Homo sapiens" [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 PANTHER:PTHR23350 Pfam:PF04757 EMBL:AL513477
HGNC:HGNC:8851 HOGENOM:HOG000180194 IPI:IPI00966264
ProteinModelPortal:D6RBB0 SMR:D6RBB0 Ensembl:ENST00000507596
ArrayExpress:D6RBB0 Bgee:D6RBB0 Uniprot:D6RBB0
Length = 324
Score = 92 (37.4 bits), Expect = 0.00078, P = 0.00078
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 15 LEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
LEE R C C +R+ T C H+FCW+C+ + KCP C F
Sbjct: 262 LEE-RAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSS---KCPLCREKF 312
>UNIPROTKB|F1PW68 [details] [associations]
symbol:DTX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AAEX03006952
Ensembl:ENSCAFT00000035912 OMA:TMIVERD Uniprot:F1PW68
Length = 247
Score = 90 (36.7 bits), Expect = 0.00080, P = 0.00080
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 15 LEEIREYKETLTCPSCKVKRKDA-VLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFG 70
L E E +E+ TCP C + ++A L KC H FC C+ TR ++ CP C +G
Sbjct: 53 LREEAEEQES-TCPICLGEIQNAKTLEKCRHSFCEGCI-TRALQVKKACPMCGRFYG 107
>ZFIN|ZDB-GENE-071004-19 [details] [associations]
symbol:trim35-28 "tripartite motif containing 35-28"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-071004-19 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX571761 IPI:IPI00493500 Ensembl:ENSDART00000041787
OMA:LINISMH Bgee:F1QJY4 Uniprot:F1QJY4
Length = 477
Score = 94 (38.1 bits), Expect = 0.00084, P = 0.00084
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 23 ET-LTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETR-QRKCPKC 65
ET LTCP CK K+ L C H FC CL ++ + +R+CP C
Sbjct: 17 ETDLTCPVCKDIFKEPELLSCSHSFCKVCLEGSWKNQTKRQCPMC 61
>UNIPROTKB|F1NDM6 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0045892 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 GO:GO:0035102
OMA:IGANEDT EMBL:AADN02030828 EMBL:AADN02030829 IPI:IPI00811000
Ensembl:ENSGALT00000013395 Uniprot:F1NDM6
Length = 293
Score = 91 (37.1 bits), Expect = 0.00085, P = 0.00085
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 13 VMLEEIREYKETLTCPSCKVKRKDAV-LTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+ L E+ Y + C CK DA +T+C H FC C+ R+ +CPKCN
Sbjct: 66 INLAELTPY---ILCSICKGYFIDATTITECLHTFCKSCI-VRHFYYSNRCPKCN 116
>UNIPROTKB|Q32NQ8 [details] [associations]
symbol:rnf10 "RING finger protein 10" species:8355 "Xenopus
laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0010626 "negative
regulation of Schwann cell proliferation" evidence=ISS] [GO:0031643
"positive regulation of myelination" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0010626 GO:GO:0031643 CTD:9921
HOVERGEN:HBG059523 EMBL:BC108524 RefSeq:NP_001089838.1
UniGene:Xl.22040 ProteinModelPortal:Q32NQ8 GeneID:734904
KEGG:xla:734904 Xenbase:XB-GENE-866563 Uniprot:Q32NQ8
Length = 756
Score = 96 (38.9 bits), Expect = 0.00093, P = 0.00093
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
+E++R + E +CP C A +T+C H+FCW C+ ++ +CP C ++
Sbjct: 193 VEQVRIFSHEVASCPICLYPPVAAKITRCGHIFCWPCILHYLSLSEKDWSRCPICYSSII 252
Query: 71 AND 73
D
Sbjct: 253 KKD 255
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 89 (36.4 bits), Expect = 0.00094, P = 0.00094
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 18 IREYKETLTCPSCK-VKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC-NAAFGANDYH 75
++++ +TC CK K +T+C H FC C+ +E CP+C N N
Sbjct: 9 VKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFED-SNDCPRCGNQVHETNPLE 67
Query: 76 RLYL 79
L L
Sbjct: 68 MLRL 71
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 84 (34.6 bits), Expect = 0.00094, P = 0.00094
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 26 TCPSC-KVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAF 69
TCP C +V + + C H FC +CL+ + CP C F
Sbjct: 11 TCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPF 55
>UNIPROTKB|F1PC91 [details] [associations]
symbol:RNF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
EMBL:AAEX03002450 EMBL:AAEX03002451 Ensembl:ENSCAFT00000036593
Uniprot:F1PC91
Length = 189
Score = 87 (35.7 bits), Expect = 0.00095, P = 0.00095
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 24 TLTCPSC-----KVKRKDAVL--TKCFHVFCWDCLRTRYETRQRKCPKCNAAFGANDYHR 76
T++CP C ++ + ++ T+C HVFC CLR + CP C YH
Sbjct: 129 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDALKNANT-CPTCRKKINHKRYHP 187
Query: 77 LY 78
+Y
Sbjct: 188 IY 189
>UNIPROTKB|Q6ZRF8 [details] [associations]
symbol:RNF207 "RING finger protein 207" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL031847 CTD:388591
eggNOG:NOG122723 HOGENOM:HOG000154160 HOVERGEN:HBG096720
OrthoDB:EOG4QVCBS EMBL:AK056658 EMBL:AK127700 EMBL:AK128246
EMBL:AK294223 EMBL:BC119780 EMBL:BC128237 IPI:IPI00043236
IPI:IPI00397747 IPI:IPI00830073 IPI:IPI00867610 RefSeq:NP_997279.2
UniGene:Hs.716549 ProteinModelPortal:Q6ZRF8 SMR:Q6ZRF8
STRING:Q6ZRF8 PhosphoSite:Q6ZRF8 DMDM:158563957 PRIDE:Q6ZRF8
Ensembl:ENST00000377939 Ensembl:ENST00000377948 GeneID:388591
KEGG:hsa:388591 UCSC:uc001amf.1 UCSC:uc001amg.3
GeneCards:GC01P006265 H-InvDB:HIX0000075 HGNC:HGNC:32947
HPA:HPA028378 neXtProt:NX_Q6ZRF8 PharmGKB:PA145148144
InParanoid:Q6ZRF8 OMA:QSSKIAS GenomeRNAi:388591 NextBio:102203
Bgee:Q6ZRF8 CleanEx:HS_RNF207 Genevestigator:Q6ZRF8 Uniprot:Q6ZRF8
Length = 634
Score = 95 (38.5 bits), Expect = 0.00096, P = 0.00096
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 25 LTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
L CP C V+ + L CFH FC CLR R + CP C
Sbjct: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLC 63
>UNIPROTKB|F1RIM2 [details] [associations]
symbol:RNF207 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 CTD:388591 GeneTree:ENSGT00510000048612
OMA:QSSKIAS EMBL:FP102454 RefSeq:XP_003481985.1
Ensembl:ENSSSCT00000003738 GeneID:100515143 KEGG:ssc:100515143
Uniprot:F1RIM2
Length = 634
Score = 95 (38.5 bits), Expect = 0.00096, P = 0.00096
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 25 LTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKC 65
L CP C V+ + L CFH FC CLR R + CP C
Sbjct: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLRGRAADGRLACPLC 63
>ZFIN|ZDB-GENE-030131-2969 [details] [associations]
symbol:rnf10 "ring finger protein 10" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030131-2969 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00390000001731 CTD:9921 HOGENOM:HOG000006763
HOVERGEN:HBG059523 OMA:PLAKESV EMBL:CR382384 IPI:IPI00508098
RefSeq:NP_001116727.1 UniGene:Dr.76641 Ensembl:ENSDART00000108518
GeneID:560444 KEGG:dre:560444 NextBio:20883447 Uniprot:B0UXR5
Length = 778
Score = 96 (38.9 bits), Expect = 0.00096, P = 0.00096
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
++++R Y E +CP C A +T+C H++CW C+ ++ KCP C A
Sbjct: 209 VQQVRIYSHEVPSCPICLYPPVAAHMTRCGHIYCWPCMLHYLSLSEKSWSKCPICYEAVH 268
Query: 71 AND 73
+ D
Sbjct: 269 SAD 271
>TAIR|locus:2089318 [details] [associations]
symbol:AT3G16600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00490
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002686
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:QACNHPQ
IPI:IPI00536054 RefSeq:NP_188282.1 UniGene:At.53337
ProteinModelPortal:F4J2R0 PRIDE:F4J2R0 EnsemblPlants:AT3G16600.1
GeneID:820911 KEGG:ath:AT3G16600 Uniprot:F4J2R0
Length = 638
Score = 95 (38.5 bits), Expect = 0.00097, P = 0.00096
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 13 VMLEEIREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCN 66
+M ++ + T TC C KD V+T C HVFC++C+ CP N
Sbjct: 382 IMFLDLLKLSST-TCSVCSDPPKDPVVTLCGHVFCYECVSVNINGDNNTCPALN 434
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 87 (35.7 bits), Expect = 0.00099, P = 0.00099
Identities = 19/48 (39%), Positives = 22/48 (45%)
Query: 23 ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRY-ETRQRKCPKCNAAF 69
E L C C D V T C H FC CL T + +T+ CP C F
Sbjct: 12 EDLQCSICLEVFTDPVSTPCGHNFCKSCLNTCWNKTQTCSCPNCKETF 59
>UNIPROTKB|Q96PU4 [details] [associations]
symbol:UHRF2 "E3 ubiquitin-protein ligase UHRF2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=IDA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=IEP] [GO:0051726 "regulation of cell cycle" evidence=TAS]
[GO:0051865 "protein autoubiquitination" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0003677 GO:GO:0008283 GO:GO:0008270 GO:GO:0005720
GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 EMBL:AL353718 eggNOG:COG3440 Gene3D:2.30.280.10
HOGENOM:HOG000124662 HOVERGEN:HBG059298 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M EMBL:AB071698 EMBL:AF274049
EMBL:AL133480 EMBL:BC028397 EMBL:AL137728 IPI:IPI00044681
IPI:IPI00395464 RefSeq:NP_690856.1 UniGene:Hs.493401 PDB:1WY8
PDB:1Z6U PDB:2E6S PDB:3OLN PDBsum:1WY8 PDBsum:1Z6U PDBsum:2E6S
PDBsum:3OLN ProteinModelPortal:Q96PU4 SMR:Q96PU4 IntAct:Q96PU4
MINT:MINT-1196856 STRING:Q96PU4 PhosphoSite:Q96PU4 DMDM:67462076
PaxDb:Q96PU4 PeptideAtlas:Q96PU4 PRIDE:Q96PU4 DNASU:115426
Ensembl:ENST00000276893 Ensembl:ENST00000450508
Ensembl:ENST00000468435 GeneID:115426 KEGG:hsa:115426
UCSC:uc003zjy.3 CTD:115426 GeneCards:GC09P006405 HGNC:HGNC:12557
HPA:HPA026633 HPA:HPA026697 neXtProt:NX_Q96PU4 PharmGKB:PA37197
InParanoid:Q96PU4 KO:K15713 OMA:VNHNSKE ChiTaRS:UHRF2
EvolutionaryTrace:Q96PU4 GenomeRNAi:115426 NextBio:79598
ArrayExpress:Q96PU4 Bgee:Q96PU4 CleanEx:HS_UHRF2
Genevestigator:Q96PU4 GermOnline:ENSG00000147854 Uniprot:Q96PU4
Length = 802
Score = 96 (38.9 bits), Expect = 0.0010, P = 0.0010
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 18 IREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAN 72
+++ +++ C C+ V T+CFH C DCL+ ++ + CP C G N
Sbjct: 724 LKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 778
>RGD|1309282 [details] [associations]
symbol:Rnf10 "ring finger protein 10" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010626 "negative regulation of Schwann cell
proliferation" evidence=IDA] [GO:0031643 "positive regulation of
myelination" evidence=IMP] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 RGD:1309282 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0010626 HSSP:P25916 GO:GO:0031643
eggNOG:NOG330884 GeneTree:ENSGT00390000001731 CTD:9921
HOGENOM:HOG000006763 HOVERGEN:HBG059523 EMBL:BC083831
IPI:IPI00952029 RefSeq:NP_001011904.1 UniGene:Rn.11656
ProteinModelPortal:Q5XI59 STRING:Q5XI59 Ensembl:ENSRNOT00000064910
GeneID:288710 KEGG:rno:288710 UCSC:RGD:1309282 InParanoid:Q5XI59
NextBio:628597 ArrayExpress:Q5XI59 Genevestigator:Q5XI59
GermOnline:ENSRNOG00000001172 Uniprot:Q5XI59
Length = 802
Score = 96 (38.9 bits), Expect = 0.0010, P = 0.0010
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
+E++R E +CP C A +T+C H+FCW C+ +R KCP C ++
Sbjct: 212 VEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSERTWSKCPICYSSVH 271
Query: 71 AND 73
D
Sbjct: 272 KKD 274
>UNIPROTKB|Q5XI59 [details] [associations]
symbol:Rnf10 "RING finger protein 10" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 RGD:1309282
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0010626 HSSP:P25916 GO:GO:0031643 eggNOG:NOG330884
GeneTree:ENSGT00390000001731 CTD:9921 HOGENOM:HOG000006763
HOVERGEN:HBG059523 EMBL:BC083831 IPI:IPI00952029
RefSeq:NP_001011904.1 UniGene:Rn.11656 ProteinModelPortal:Q5XI59
STRING:Q5XI59 Ensembl:ENSRNOT00000064910 GeneID:288710
KEGG:rno:288710 UCSC:RGD:1309282 InParanoid:Q5XI59 NextBio:628597
ArrayExpress:Q5XI59 Genevestigator:Q5XI59
GermOnline:ENSRNOG00000001172 Uniprot:Q5XI59
Length = 802
Score = 96 (38.9 bits), Expect = 0.0010, P = 0.0010
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 15 LEEIREYK-ETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQR---KCPKCNAAFG 70
+E++R E +CP C A +T+C H+FCW C+ +R KCP C ++
Sbjct: 212 VEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSERTWSKCPICYSSVH 271
Query: 71 AND 73
D
Sbjct: 272 KKD 274
>MGI|MGI:1923718 [details] [associations]
symbol:Uhrf2 "ubiquitin-like, containing PHD and RING finger
domains 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO;ISS]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=ISS] [GO:0042393
"histone binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISO] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 MGI:MGI:1923718
Prosite:PS00299 Prosite:PS00518 GO:GO:0030154 GO:GO:0071158
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0005720 GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511 PROSITE:PS01359
GO:GO:0004842 GO:GO:0042393 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0051865 Gene3D:2.30.30.30
InterPro:IPR014722 eggNOG:COG3440 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 HOGENOM:HOG000124662
HOVERGEN:HBG059298 InterPro:IPR021991 Pfam:PF12148
OrthoDB:EOG408N7M CTD:115426 KO:K15713 OMA:VNHNSKE EMBL:AB116653
EMBL:AF274047 EMBL:AK031036 EMBL:AK041564 EMBL:AK042321
EMBL:AK051743 EMBL:AK080925 EMBL:BC060241 IPI:IPI00169767
IPI:IPI00607019 IPI:IPI00757694 RefSeq:NP_659122.2
UniGene:Mm.313364 ProteinModelPortal:Q7TMI3 SMR:Q7TMI3
STRING:Q7TMI3 PhosphoSite:Q7TMI3 PRIDE:Q7TMI3
Ensembl:ENSMUST00000025739 GeneID:109113 KEGG:mmu:109113
UCSC:uc008hef.1 UCSC:uc008heh.1 UCSC:uc008hei.1 InParanoid:Q7TMI3
NextBio:361658 Bgee:Q7TMI3 Genevestigator:Q7TMI3
GermOnline:ENSMUSG00000024817 Uniprot:Q7TMI3
Length = 803
Score = 96 (38.9 bits), Expect = 0.0010, P = 0.0010
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 18 IREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAN 72
+++ +++ C C+ V T+CFH C DCL+ ++ + CP C G N
Sbjct: 725 LKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 779
>RGD|1309990 [details] [associations]
symbol:Uhrf2 "ubiquitin-like with PHD and ring finger domains 2,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005720 "nuclear
heterochromatin" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0071158
"positive regulation of cell cycle arrest" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 RGD:1309990
Prosite:PS00518 GO:GO:0030154 GO:GO:0071158 GO:GO:0046872
GO:GO:0008283 GO:GO:0008270 GO:GO:0005720 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006511
GO:GO:0004842 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0051865 Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:CH473953
Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296 InterPro:IPR021991
Pfam:PF12148 OrthoDB:EOG408N7M CTD:115426 KO:K15713 IPI:IPI00213897
RefSeq:NP_001101055.1 UniGene:Rn.2173 Ensembl:ENSRNOT00000015406
GeneID:309331 KEGG:rno:309331 UCSC:RGD:1309990 NextBio:660596
Uniprot:D3ZK36
Length = 803
Score = 96 (38.9 bits), Expect = 0.0010, P = 0.0010
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 18 IREYKETLTCPSCKVKRKDAVLTKCFHVFCWDCLRTRYETRQRKCPKCNAAFGAN 72
+++ +++ C C+ V T+CFH C DCL+ ++ + CP C G N
Sbjct: 725 LKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 779
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.449 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 81 81 0.00091 102 3 11 22 0.37 29
29 0.42 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 197
No. of states in DFA: 558 (59 KB)
Total size of DFA: 116 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.68u 0.11s 9.79t Elapsed: 00:00:04
Total cpu time: 9.70u 0.11s 9.81t Elapsed: 00:00:04
Start: Thu Aug 15 16:07:53 2013 End: Thu Aug 15 16:07:57 2013
WARNINGS ISSUED: 1