Query psy10801
Match_columns 153
No_of_seqs 150 out of 1175
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:51:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10801.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10801hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 99.9 3.6E-23 1.2E-27 184.8 12.8 129 7-153 442-591 (662)
2 2xag_A Lysine-specific histone 99.9 3.1E-22 1E-26 184.0 13.1 129 7-153 613-762 (852)
3 4gut_A Lysine-specific histone 99.8 4.3E-21 1.5E-25 174.9 10.7 134 2-153 564-722 (776)
4 1rsg_A FMS1 protein; FAD bindi 99.8 1.4E-20 4.8E-25 162.2 11.8 74 2-90 236-318 (516)
5 1b37_A Protein (polyamine oxid 99.8 1.5E-18 5.2E-23 147.6 11.7 134 2-153 249-404 (472)
6 1s3e_A Amine oxidase [flavin-c 99.7 2.5E-17 8.7E-22 141.6 11.0 132 2-153 247-399 (520)
7 2e1m_B L-glutamate oxidase; L- 99.7 1.1E-17 3.8E-22 122.9 6.3 104 7-127 3-110 (130)
8 2yg5_A Putrescine oxidase; oxi 99.7 7E-17 2.4E-21 135.8 11.2 130 2-153 248-396 (453)
9 2iid_A L-amino-acid oxidase; f 99.7 3.9E-17 1.3E-21 139.2 7.4 133 2-153 273-431 (498)
10 2vvm_A Monoamine oxidase N; FA 99.7 9.8E-17 3.4E-21 136.7 9.6 129 2-153 291-431 (495)
11 3k7m_X 6-hydroxy-L-nicotine ox 99.7 2.9E-16 1E-20 131.0 9.3 128 2-153 238-372 (431)
12 2jae_A L-amino acid oxidase; o 99.6 1.1E-14 3.8E-19 123.8 9.3 130 2-153 272-426 (489)
13 3ayj_A Pro-enzyme of L-phenyla 99.4 3.1E-14 1.1E-18 129.0 3.8 133 3-152 392-617 (721)
14 3i6d_A Protoporphyrinogen oxid 99.1 2.1E-10 7.2E-15 95.8 10.3 118 2-145 268-412 (470)
15 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 5.7E-10 2E-14 90.5 9.0 123 2-144 144-290 (342)
16 3lov_A Protoporphyrinogen oxid 98.9 6.4E-09 2.2E-13 87.7 11.3 120 2-150 269-416 (475)
17 2ivd_A PPO, PPOX, protoporphyr 98.8 1.2E-08 4.3E-13 85.9 9.6 118 5-145 276-418 (478)
18 1sez_A Protoporphyrinogen oxid 98.7 5.1E-09 1.7E-13 89.0 3.4 120 8-152 293-446 (504)
19 3nks_A Protoporphyrinogen oxid 98.5 8.7E-07 3E-11 74.4 10.6 117 2-143 270-416 (477)
20 1yvv_A Amine oxidase, flavin-c 98.0 2.2E-05 7.6E-10 62.4 8.4 118 2-143 140-277 (336)
21 2e1m_C L-glutamate oxidase; L- 97.6 2.4E-05 8.1E-10 59.3 2.4 41 111-153 57-99 (181)
22 3ka7_A Oxidoreductase; structu 97.5 0.0012 4.1E-08 54.2 11.3 62 2-80 232-295 (425)
23 4gde_A UDP-galactopyranose mut 97.5 0.00069 2.3E-08 56.9 9.8 55 2-77 255-309 (513)
24 4dsg_A UDP-galactopyranose mut 97.3 0.00025 8.4E-09 60.7 5.9 60 2-76 249-308 (484)
25 2b9w_A Putative aminooxidase; 95.5 0.028 9.4E-07 46.1 6.4 38 2-45 238-275 (424)
26 3nrn_A Uncharacterized protein 95.3 0.026 8.8E-07 46.4 5.8 58 4-78 224-281 (421)
27 4dgk_A Phytoene dehydrogenase; 90.4 0.26 8.8E-06 41.1 4.4 43 2-45 257-299 (501)
28 1v0j_A UDP-galactopyranose mut 47.9 13 0.00044 30.3 3.2 16 11-26 237-252 (399)
29 3dje_A Fructosyl amine: oxygen 47.0 10 0.00034 30.7 2.4 20 2-21 200-219 (438)
30 4fk1_A Putative thioredoxin re 38.9 15 0.00053 28.1 2.2 18 2-19 96-113 (304)
31 3p1w_A Rabgdi protein; GDI RAB 36.7 16 0.00055 31.1 2.1 19 2-20 293-311 (475)
32 2cul_A Glucose-inhibited divis 36.1 19 0.00064 26.7 2.2 20 2-21 104-123 (232)
33 3vrd_B FCCB subunit, flavocyto 35.5 23 0.0008 28.2 2.9 20 2-21 237-256 (401)
34 3hyw_A Sulfide-quinone reducta 35.5 22 0.00075 29.0 2.8 18 2-19 88-105 (430)
35 1d5t_A Guanine nucleotide diss 34.6 19 0.00065 29.6 2.2 18 5-22 272-289 (433)
36 3fbs_A Oxidoreductase; structu 33.2 22 0.00074 26.5 2.2 18 2-19 91-108 (297)
37 3lxd_A FAD-dependent pyridine 32.4 26 0.00089 28.2 2.7 20 2-21 230-249 (415)
38 2bcg_G Secretory pathway GDP d 32.3 20 0.00068 29.6 2.0 17 6-22 283-299 (453)
39 3fg2_P Putative rubredoxin red 32.1 27 0.00091 28.1 2.7 20 2-21 220-239 (404)
40 3nyc_A D-arginine dehydrogenas 32.1 22 0.00075 27.6 2.1 19 2-21 189-207 (381)
41 3h8l_A NADH oxidase; membrane 31.2 32 0.0011 27.6 3.0 20 2-21 249-268 (409)
42 3ef6_A Toluene 1,2-dioxygenase 29.7 33 0.0011 27.8 2.8 20 2-21 220-239 (410)
43 4hb9_A Similarities with proba 29.1 32 0.0011 26.9 2.6 17 2-18 145-161 (412)
44 2ywl_A Thioredoxin reductase r 28.4 31 0.0011 24.0 2.2 18 2-20 90-107 (180)
45 3gwf_A Cyclohexanone monooxyge 26.7 37 0.0013 29.0 2.8 20 2-21 363-382 (540)
46 4a9w_A Monooxygenase; baeyer-v 26.6 41 0.0014 25.6 2.8 20 2-21 264-283 (357)
47 3klj_A NAD(FAD)-dependent dehy 26.6 38 0.0013 27.4 2.7 18 2-19 95-112 (385)
48 3alj_A 2-methyl-3-hydroxypyrid 26.2 39 0.0013 26.7 2.7 18 2-19 139-156 (379)
49 3fbs_A Oxidoreductase; structu 26.2 41 0.0014 25.0 2.7 19 2-20 205-223 (297)
50 3hdq_A UDP-galactopyranose mut 25.5 17 0.00059 30.1 0.4 20 6-25 246-265 (397)
51 3rp8_A Flavoprotein monooxygen 25.1 41 0.0014 26.8 2.6 18 2-19 160-177 (407)
52 4ap3_A Steroid monooxygenase; 24.7 35 0.0012 29.2 2.2 19 2-20 138-156 (549)
53 3sx6_A Sulfide-quinone reducta 24.7 43 0.0015 27.2 2.7 18 2-19 91-108 (437)
54 3dme_A Conserved exported prot 24.6 33 0.0011 26.3 1.9 20 2-21 186-207 (369)
55 3ps9_A TRNA 5-methylaminomethy 24.5 40 0.0014 29.3 2.6 20 2-21 452-471 (676)
56 3uox_A Otemo; baeyer-villiger 23.9 33 0.0011 29.3 1.9 19 2-20 126-144 (545)
57 1w4x_A Phenylacetone monooxyge 23.9 37 0.0013 28.7 2.2 19 2-20 133-151 (542)
58 2i0z_A NAD(FAD)-utilizing dehy 23.8 40 0.0014 27.6 2.4 18 2-19 170-187 (447)
59 2x3n_A Probable FAD-dependent 23.4 39 0.0013 26.8 2.1 19 2-20 145-163 (399)
60 2v3a_A Rubredoxin reductase; a 23.4 47 0.0016 26.4 2.6 20 2-21 222-241 (384)
61 1fl2_A Alkyl hydroperoxide red 23.3 41 0.0014 25.4 2.2 18 2-19 94-111 (310)
62 2vou_A 2,6-dihydroxypyridine h 23.2 47 0.0016 26.4 2.6 18 2-19 132-149 (397)
63 3gwf_A Cyclohexanone monooxyge 22.5 40 0.0014 28.7 2.2 19 2-20 126-144 (540)
64 2gqw_A Ferredoxin reductase; f 22.3 54 0.0019 26.4 2.8 20 2-21 218-237 (408)
65 2xdo_A TETX2 protein; tetracyc 22.2 43 0.0015 26.7 2.2 19 2-20 161-179 (398)
66 2zbw_A Thioredoxin reductase; 22.0 45 0.0015 25.5 2.2 18 2-19 100-117 (335)
67 3f8d_A Thioredoxin reductase ( 21.7 46 0.0016 24.9 2.2 18 2-19 104-121 (323)
68 2weu_A Tryptophan 5-halogenase 21.4 53 0.0018 27.2 2.7 20 2-21 209-228 (511)
69 2e4g_A Tryptophan halogenase; 20.8 55 0.0019 27.7 2.7 19 2-20 231-249 (550)
70 3ab1_A Ferredoxin--NADP reduct 20.8 48 0.0017 25.7 2.2 18 2-19 110-127 (360)
71 3o0h_A Glutathione reductase; 20.8 55 0.0019 27.0 2.7 20 2-21 267-286 (484)
72 2q7v_A Thioredoxin reductase; 20.5 46 0.0016 25.4 1.9 18 2-19 102-119 (325)
73 2zxi_A TRNA uridine 5-carboxym 20.3 56 0.0019 29.0 2.7 18 2-19 159-176 (637)
74 1y56_B Sarcosine oxidase; dehy 20.2 49 0.0017 25.8 2.1 19 2-21 185-203 (382)
75 1m6i_A Programmed cell death p 20.0 58 0.002 27.1 2.7 20 2-21 261-280 (493)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.89 E-value=3.6e-23 Score=184.76 Aligned_cols=129 Identities=29% Similarity=0.571 Sum_probs=102.3
Q ss_pred CCEEEcCEEEEecChHHHhh--CCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCCCCc
Q psy10801 7 GTQYSADRILITVSLGVLKS--NLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPEDYQG 84 (153)
Q Consensus 7 G~~~~ad~vIvTvPl~vLk~--~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~~~~ 84 (153)
|++++||+||||+|+++|++ +.|.|.|+||++|++||++ ++||..+||+|.|+++||+++..+
T Consensus 442 ~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~---------------l~~g~~~KV~l~f~~~fW~~~~~~ 506 (662)
T 2z3y_A 442 TFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQR---------------MGFGNLNKVVLCFDRVFWDPSVNL 506 (662)
T ss_dssp EEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHH---------------SEECCCEEEEEECSSCCSCTTCSE
T ss_pred CeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHh---------------CCccceeEEEEEcCcccccCCCCc
Confidence 67899999999999999997 5699999999999999999 999999999999999999876544
Q ss_pred eEEEe-------------ccCCccccccCCCc------ccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCCC
Q psy10801 85 FHFFW-------------TQHDEQTLFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSVWSIN 145 (153)
Q Consensus 85 ~~~~~-------------~~~~~~~~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~W~~d 145 (153)
++.++ +.+....+....+. ..+.+ +++++.++++|+++||.. ..++|+.+.+++|..|
T Consensus 507 ~G~l~~~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~~lsd--ee~~~~~l~~L~~~~g~~-~~~~p~~~~v~~W~~d 583 (662)
T 2z3y_A 507 FGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISD--DVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRAD 583 (662)
T ss_dssp EEECCSSSTTTTEEEEEECCSSSSEEEEEECTHHHHHHTTSCH--HHHHHHHHHHHHHHHCTT-SSCCCSEEEECCTTTC
T ss_pred eeeecCCCCCCCceeEEEeCCCCCEEEEEeccHhHHHHHhCCH--HHHHHHHHHHHHHHhCCc-ccCCCceeEEEEECCC
Confidence 54432 22111111110000 11223 788999999999999975 4679999999999999
Q ss_pred CCCCcCCC
Q psy10801 146 PHFRGSYR 153 (153)
Q Consensus 146 p~~~Gsys 153 (153)
||++||||
T Consensus 584 p~~~Gsys 591 (662)
T 2z3y_A 584 PWARGSYS 591 (662)
T ss_dssp TTTSSSCE
T ss_pred CCCCcccc
Confidence 99999995
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.88 E-value=3.1e-22 Score=184.00 Aligned_cols=129 Identities=29% Similarity=0.580 Sum_probs=102.6
Q ss_pred CCEEEcCEEEEecChHHHhh--CCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCCCCc
Q psy10801 7 GTQYSADRILITVSLGVLKS--NLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPEDYQG 84 (153)
Q Consensus 7 G~~~~ad~vIvTvPl~vLk~--~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~~~~ 84 (153)
|++++||+||||+|+++|+. +.|.|.|+||++|++||++ ++||..+||+|.|+++||+++..+
T Consensus 613 g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~---------------l~~g~v~KV~L~F~~~fW~~~~~~ 677 (852)
T 2xag_A 613 TFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQR---------------MGFGNLNKVVLCFDRVFWDPSVNL 677 (852)
T ss_dssp EEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHH---------------SEECCCEEEEEECSSCCSCTTCCE
T ss_pred CeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHc---------------CCccceEEEEEEcCCcccCCCCCe
Confidence 67899999999999999997 5689999999999999999 999999999999999999876555
Q ss_pred eEEEeccCC-------------ccccccCCCc------ccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCCC
Q psy10801 85 FHFFWTQHD-------------EQTLFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSVWSIN 145 (153)
Q Consensus 85 ~~~~~~~~~-------------~~~~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~W~~d 145 (153)
++.++.... ...+....+. ..+.+ +++++.++++|+++||.. ..++|..+.+++|..|
T Consensus 678 fG~l~~~~~~~~~l~~~~~~~~~pvLl~~v~G~~a~~l~~lsd--eel~~~~l~~L~~ifG~~-~~~~P~~~~vtrW~~d 754 (852)
T 2xag_A 678 FGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISD--DVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRAD 754 (852)
T ss_dssp EEECCSSSTTTTTTCEEEECSSSSEEEEEECHHHHHHGGGSCH--HHHHHHHHHHHHHHHCTT-TCCCCSEEEECCTTTC
T ss_pred eeeeccccCCCCceEEEecCCCCCEEEEEecCcCHHHHhcCCH--HHHHHHHHHHHHHHhCcc-ccCCceEEEEEecCCC
Confidence 555432211 1111100000 11222 788999999999999975 4679999999999999
Q ss_pred CCCCcCCC
Q psy10801 146 PHFRGSYR 153 (153)
Q Consensus 146 p~~~Gsys 153 (153)
||++||||
T Consensus 755 p~s~GsYs 762 (852)
T 2xag_A 755 PWARGSYS 762 (852)
T ss_dssp TTTSSSCE
T ss_pred CCcCcccc
Confidence 99999995
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.84 E-value=4.3e-21 Score=174.88 Aligned_cols=134 Identities=31% Similarity=0.599 Sum_probs=105.1
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|++.+|++++||+||+|+|+++|+...|.|.|+||+.+++||++ +++|...||++.|+++||+++
T Consensus 564 V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~---------------l~~g~~~KV~l~f~~~FW~~~ 628 (776)
T 4gut_A 564 VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINS---------------LGAGIIEKIALQFPYRFWDSK 628 (776)
T ss_dssp EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHH---------------EEEECCEEEEEECSSCTTHHH
T ss_pred EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHh---------------CCCeeEEEEEEecCccccccc
Confidence 67889999999999999999999987899999999999999999 999999999999999999864
Q ss_pred CC---ceEE-------------EeccCCcc---ccccCCCc------ccccccHHHHHHHHHHHHHHHhCCCCCCCCCeE
Q psy10801 82 YQ---GFHF-------------FWTQHDEQ---TLFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIR 136 (153)
Q Consensus 82 ~~---~~~~-------------~~~~~~~~---~~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~ 136 (153)
.. .++. +++..+.. .+.+..+. ..+.+ +++++.++++|+++||.. .+++|+.
T Consensus 629 ~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsd--eel~~~~l~~L~~ifg~~-~~~~P~~ 705 (776)
T 4gut_A 629 VQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDD--KQVLQQCMATLRELFKEQ-EVPDPTK 705 (776)
T ss_dssp HTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCH--HHHHHHHHHHHHHHTTTS-CCCCCSE
T ss_pred CCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCH--HHHHHHHHHHHHHHhCcc-cccCcce
Confidence 22 2221 12111110 01000000 11222 889999999999999975 5789999
Q ss_pred EEEecCCCCCCCCcCCC
Q psy10801 137 IVRSVWSINPHFRGSYR 153 (153)
Q Consensus 137 ~~~~~W~~dp~~~Gsys 153 (153)
+.+++|..|||++|+|+
T Consensus 706 ~~vt~W~~dp~s~Gsys 722 (776)
T 4gut_A 706 YFVTRWSTDPWIQMAYS 722 (776)
T ss_dssp EEECCGGGCTTTCCSEE
T ss_pred EEEecCCCCCccCCCCC
Confidence 99999999999999995
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.83 E-value=1.4e-20 Score=162.22 Aligned_cols=74 Identities=31% Similarity=0.546 Sum_probs=65.9
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhC---------CccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEE
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSN---------LITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIR 72 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~---------~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~ 72 (153)
|+|.+|++++||+||||+|+++|+.. .|.|.|+||+.|++||++ ++||..+||++.
T Consensus 236 v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~---------------~~~~~~~Kv~l~ 300 (516)
T 1rsg_A 236 VNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDK---------------IHFGALGKVIFE 300 (516)
T ss_dssp EEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTS---------------SCCCCCEEEEEE
T ss_pred EEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHh---------------CCCCcceEEEEE
Confidence 67889999999999999999999853 599999999999999999 999999999999
Q ss_pred eCCCCCCCCCCceEEEec
Q psy10801 73 FPKKWWPEDYQGFHFFWT 90 (153)
Q Consensus 73 f~~~fW~~~~~~~~~~~~ 90 (153)
|+++||+++..++...+.
T Consensus 301 f~~~fW~~~~~~~~~~~~ 318 (516)
T 1rsg_A 301 FEECCWSNESSKIVTLAN 318 (516)
T ss_dssp ESSCCSCCSCSEEEECCC
T ss_pred eCCCCCCCCCCcEEEeCC
Confidence 999999887555655443
No 5
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.77 E-value=1.5e-18 Score=147.64 Aligned_cols=134 Identities=31% Similarity=0.632 Sum_probs=102.4
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|+|.+|++++||+||+|+|+++|+...+.|.|+||+.++++|++ ++||...||++.|+++||++.
T Consensus 249 v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~---------------~~~~~~~kv~l~~~~~~w~~~ 313 (472)
T 1b37_A 249 VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQ---------------FDMAVYTKIFLKFPRKFWPEG 313 (472)
T ss_dssp EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHH---------------SEEECEEEEEEECSSCCSCCS
T ss_pred EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHh---------------cCCcceeEEEEECCCcCCCCC
Confidence 67889999999999999999999987788999999999999999 999999999999999999863
Q ss_pred C-CceE----------EEeccCCccccccC---CCcc--------cccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEE
Q psy10801 82 Y-QGFH----------FFWTQHDEQTLFKD---MAHP--------EIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVR 139 (153)
Q Consensus 82 ~-~~~~----------~~~~~~~~~~~~~~---~~~~--------~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~ 139 (153)
. .++. .+|...+.....+. .+.. .+.. +++.+.++++|+++||+. .+++|+++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~--~e~~~~~l~~L~~~~Pg~-~~~~~~~~~~ 390 (472)
T 1b37_A 314 KGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSD--EQTKAEIMQVLRKMFPGK-DVPDATDILV 390 (472)
T ss_dssp TTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCH--HHHHHHHHHHHHHHCTTS-CCCCCSEEEC
T ss_pred CCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCH--HHHHHHHHHHHHHHcCCC-CCCCCceEEe
Confidence 1 1121 12221111000000 0000 1122 788999999999999654 5778999999
Q ss_pred ecCCCCCCCCcCCC
Q psy10801 140 SVWSINPHFRGSYR 153 (153)
Q Consensus 140 ~~W~~dp~~~Gsys 153 (153)
++|..|||++|+|+
T Consensus 391 ~~W~~~~~~~G~~~ 404 (472)
T 1b37_A 391 PRWWSDRFYKGTFS 404 (472)
T ss_dssp CCTTTCTTTSSSEE
T ss_pred cccCCCCCCCcccC
Confidence 99999999999985
No 6
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.72 E-value=2.5e-17 Score=141.65 Aligned_cols=132 Identities=16% Similarity=0.315 Sum_probs=100.2
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|++.||+++.||+||+|+|+.+++. |.|.|+||+.++++|++ +.||...|+++.|+++||+++
T Consensus 247 v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~---------------~~~~~~~kv~l~~~~~~w~~~ 309 (520)
T 1s3e_A 247 VETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITR---------------VPLGSVIKCIVYYKEPFWRKK 309 (520)
T ss_dssp EEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTS---------------CCBCCEEEEEEECSSCGGGGG
T ss_pred EEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHh---------------CCCcceEEEEEEeCCCcccCC
Confidence 5778999999999999999999975 88999999999999999 999999999999999999764
Q ss_pred C-CceE----------EEeccCCcc----ccccCCCc------ccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEe
Q psy10801 82 Y-QGFH----------FFWTQHDEQ----TLFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRS 140 (153)
Q Consensus 82 ~-~~~~----------~~~~~~~~~----~~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~ 140 (153)
. .++. .+|+..... .+...... ..+.+ +++++.+++.|+++||.. .+.+|..+..+
T Consensus 310 ~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~--~e~~~~vl~~L~~~~~~~-~~~~p~~~~~~ 386 (520)
T 1s3e_A 310 DYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTK--EERLKKLCELYAKVLGSL-EALEPVHYEEK 386 (520)
T ss_dssp TEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCH--HHHHHHHHHHHHHHHTCG-GGGCCSEEEEE
T ss_pred CCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCH--HHHHHHHHHHHHHHhCcc-ccCCccEEEEE
Confidence 2 1211 122211100 00000000 01122 788899999999999863 36789999999
Q ss_pred cCCCCCCCCcCCC
Q psy10801 141 VWSINPHFRGSYR 153 (153)
Q Consensus 141 ~W~~dp~~~Gsys 153 (153)
+|..|||++|+|+
T Consensus 387 ~W~~~~~~~G~~~ 399 (520)
T 1s3e_A 387 NWCEEQYSGGCYT 399 (520)
T ss_dssp EGGGCTTTCSSSC
T ss_pred eeCCCCCCCCCCc
Confidence 9999999999985
No 7
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.71 E-value=1.1e-17 Score=122.87 Aligned_cols=104 Identities=12% Similarity=0.150 Sum_probs=58.3
Q ss_pred CCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCCCCceE
Q psy10801 7 GTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPEDYQGFH 86 (153)
Q Consensus 7 G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~~~~~~ 86 (153)
.++++||+||||+|+++|+. |.|+|+||+.|++||++ ++||..+||+++|+++||+++...+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~---------------l~~g~~~Kv~l~f~~~FW~~~~~~gd 65 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIE---------------THYDQATKVLLEFSRRWWEFTEADWK 65 (130)
T ss_dssp CEEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHH---------------CCEECEEEEEEEESSCGGGCCHHHHH
T ss_pred ceEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHh---------------CCCcceeEEEEEECCCCCCCCCcccc
Confidence 34799999999999999984 99999999999999999 99999999999999999987632110
Q ss_pred EEeccCCccccccCC-Cc---ccccccHHHHHHHHHHHHHHHhCC
Q psy10801 87 FFWTQHDEQTLFKDM-AH---PEIFDFEKVLQADIMRLFRHFLGG 127 (153)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~---~~l~~f~~~~~~~~~~~L~~~~g~ 127 (153)
..-++.....+.+.. |. ..+..+.++.++.++..|..++|+
T Consensus 66 ~s~~~~~pg~l~~f~~wg~~A~~~~~l~~~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 66 RELDAIAPGLYDYYQQWGEDDAEAALALPQSVRNLPTGLLGAHPS 110 (130)
T ss_dssp HHHHHHSTTHHHHHHHHCCCSCCCC--------------------
T ss_pred ccCCCCCCeEEEEecccCHHHHHHhcCCHHHHHHHHHHHHHhCCC
Confidence 000000011111100 11 122333357778888999999985
No 8
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.70 E-value=7e-17 Score=135.76 Aligned_cols=130 Identities=21% Similarity=0.398 Sum_probs=97.1
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|+| +|++++||+||+|+|+.+++. |.|.|+||+.+++++++ +.+|...|+++.|+++||+++
T Consensus 248 v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~---------------~~~~~~~kv~l~~~~~~w~~~ 309 (453)
T 2yg5_A 248 LAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQH---------------QSLGLVIKVHAVYETPFWRED 309 (453)
T ss_dssp EET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGG---------------EEECCEEEEEEEESSCGGGGG
T ss_pred EEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhc---------------CCCcceEEEEEEECCCCCCCC
Confidence 445 778999999999999999975 78999999999999999 999999999999999999764
Q ss_pred C-Cce--------EEEeccCCccc----cccCCCc------ccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEecC
Q psy10801 82 Y-QGF--------HFFWTQHDEQT----LFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSVW 142 (153)
Q Consensus 82 ~-~~~--------~~~~~~~~~~~----~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~W 142 (153)
. .+. ..+|+...... +...... ..+.+ +++++.+++.|+++||. .+.+|+.+..++|
T Consensus 310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~l~~L~~~~~~--~~~~p~~~~~~~W 385 (453)
T 2yg5_A 310 GLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSA--EERKATILASLARYLGP--KAEEPVVYYESDW 385 (453)
T ss_dssp TEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCH--HHHHHHHHHHHHHHHCG--GGGCCSEEEECCT
T ss_pred CCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCH--HHHHHHHHHHHHHHhCc--cCCCccEEEEeec
Confidence 2 111 11122111100 0000000 01112 77889999999999986 4778999999999
Q ss_pred CCCCCCCcCCC
Q psy10801 143 SINPHFRGSYR 153 (153)
Q Consensus 143 ~~dp~~~Gsys 153 (153)
..|||++|+|+
T Consensus 386 ~~~~~~~G~~~ 396 (453)
T 2yg5_A 386 GSEEWTRGCYA 396 (453)
T ss_dssp TTCTTTCSSSC
T ss_pred CCCCCCCCCCc
Confidence 99999999984
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.68 E-value=3.9e-17 Score=139.25 Aligned_cols=133 Identities=19% Similarity=0.261 Sum_probs=93.8
Q ss_pred EEccCCC----EEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCC
Q psy10801 2 DGSADGT----QYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKW 77 (153)
Q Consensus 2 V~t~~G~----~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~f 77 (153)
|++.+|+ +++||+||+|+|+.+++ .|.|.|+||+.+++||++ ++||...||+|.|+++|
T Consensus 273 v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~---------------l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 273 VVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRS---------------VHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp EEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHH---------------CCEECEEEEEEEESSCG
T ss_pred EEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHh---------------CCCcceeEEEEEeCCCC
Confidence 4566665 58999999999999985 489999999999999999 99999999999999999
Q ss_pred CCCCC-C-ce--------EEEeccCCcc----ccccCCCc------ccccccHHHHHHHHHHHHHHHhCCCC-CCC-CCe
Q psy10801 78 WPEDY-Q-GF--------HFFWTQHDEQ----TLFKDMAH------PEIFDFEKVLQADIMRLFRHFLGGAY-IIP-EPI 135 (153)
Q Consensus 78 W~~~~-~-~~--------~~~~~~~~~~----~~~~~~~~------~~l~~f~~~~~~~~~~~L~~~~g~~~-~~~-~p~ 135 (153)
|+++. . ++ ...|..+... .+....+. ..+.+ +++++.+++.|++++|... .+. .+.
T Consensus 336 w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~--~~~~~~~l~~L~~~~g~~~~~~~~~~~ 413 (498)
T 2iid_A 336 WEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDF--KDCADIVFNDLSLIHQLPKKDIQSFCY 413 (498)
T ss_dssp GGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCH--HHHHHHHHHHHHHHHTCCHHHHHHHEE
T ss_pred ccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCH--HHHHHHHHHHHHHHcCCChhhhhhhcC
Confidence 97642 1 11 1222221100 01100000 01222 7789999999999998420 011 123
Q ss_pred EEEEecCCCCCCCCcCCC
Q psy10801 136 RIVRSVWSINPHFRGSYR 153 (153)
Q Consensus 136 ~~~~~~W~~dp~~~Gsys 153 (153)
.+..++|..|||++|+|+
T Consensus 414 ~~~~~~W~~~p~~~G~~~ 431 (498)
T 2iid_A 414 PSVIQKWSLDKYAMGGIT 431 (498)
T ss_dssp EEEEEEGGGCTTTCSSEE
T ss_pred ccEEEecCCCCCCCceee
Confidence 478899999999999984
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.68 E-value=9.8e-17 Score=136.66 Aligned_cols=129 Identities=18% Similarity=0.264 Sum_probs=96.9
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|+|.+|++++||+||+|+|+++|+. |.|.|+||+.++++|++ +.++...||++.|+++||+.-
T Consensus 291 v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~---------------~~~~~~~kv~l~~~~~~~~~~ 353 (495)
T 2vvm_A 291 VTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQA---------------GHVSMCTKVHAEVDNKDMRSW 353 (495)
T ss_dssp EEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHH---------------CCCCCCEEEEEEESCGGGGGE
T ss_pred EEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHh---------------cCCCceeEEEEEECCccCCCc
Confidence 6678898999999999999999985 88999999999999999 999999999999999998521
Q ss_pred ------CCceEEEeccCCc----ccccc--CCCcccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCCCCCCC
Q psy10801 82 ------YQGFHFFWTQHDE----QTLFK--DMAHPEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSVWSINPHFR 149 (153)
Q Consensus 82 ------~~~~~~~~~~~~~----~~~~~--~~~~~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~W~~dp~~~ 149 (153)
...+..+|.++.. ..+.. ... ..+.+ +++++.+++.|++++++ .++|.++..++|..|||++
T Consensus 354 ~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-~~~~~--~e~~~~~~~~L~~~~~~---~~~~~~~~~~~W~~dp~~~ 427 (495)
T 2vvm_A 354 TGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSA-NHIQP--DEDVRETLKAVGQLAPG---TFGVKRLVFHNWVKDEFAK 427 (495)
T ss_dssp EEEECSSCSSCEEEEEEECTTSCEEEEEEECST-TCCCT--TTCHHHHHHHHHTTSTT---SCCEEEEEECCTTTCTTTS
T ss_pred eeEecCCCCcEEEecCCCCCCCCeEEEEEeCcc-ccCCC--HHHHHHHHHHHHHhcCC---CCCceEEEEeEcCCCCCCC
Confidence 0112223322110 01111 000 11223 56678899999998864 4689999999999999999
Q ss_pred cCCC
Q psy10801 150 GSYR 153 (153)
Q Consensus 150 Gsys 153 (153)
|+|+
T Consensus 428 g~y~ 431 (495)
T 2vvm_A 428 GAWF 431 (495)
T ss_dssp SSSC
T ss_pred CCcc
Confidence 9996
No 11
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.65 E-value=2.9e-16 Score=130.97 Aligned_cols=128 Identities=16% Similarity=0.204 Sum_probs=90.6
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCC-
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPE- 80 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~- 80 (153)
|+|.+|++++||+||+|+|+++|+. |.|.|+||+.++++++. +.++...||.+.|+++||.-
T Consensus 238 v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~---------------~~~~~~~kv~~~~~~~~~~i~ 300 (431)
T 3k7m_X 238 VTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEE---------------GHGGQGLKILIHVRGAEAGIE 300 (431)
T ss_dssp EEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHH---------------CCCCCEEEEEEEEESCCTTEE
T ss_pred EEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHh---------------CCCcceEEEEEEECCCCcCce
Confidence 6788998899999999999999975 89999999999999999 99999999999999998531
Q ss_pred --CCCceEEEeccC---Cc-cccccCCCcccccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEecCCCCCCCCcCCC
Q psy10801 81 --DYQGFHFFWTQH---DE-QTLFKDMAHPEIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSVWSINPHFRGSYR 153 (153)
Q Consensus 81 --~~~~~~~~~~~~---~~-~~~~~~~~~~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~W~~dp~~~Gsys 153 (153)
+......+++.. +. ..+.+-.....+. ..-.+.+++.|++++++ ++ |+++..++|+.|||++||||
T Consensus 301 ~~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~~~---~~~~~~~~~~l~~~~~~---~~-~~~~~~~~W~~d~~~~G~~~ 372 (431)
T 3k7m_X 301 CVGDGIFPTLYDYCEVSESERLLVAFTDSGSFD---PTDIGAVKDAVLYYLPE---VE-VLGIDYHDWIADPLFEGPWV 372 (431)
T ss_dssp EEBSSSSSEEEEEEECSSSEEEEEEEEETTTCC---TTCHHHHHHHHHHHCTT---CE-EEEEECCCTTTCTTTSSSSC
T ss_pred EcCCCCEEEEEeCcCCCCCCeEEEEEeccccCC---CCCHHHHHHHHHHhcCC---CC-ccEeEecccCCCCCCCCCCC
Confidence 011011111111 11 1111100001111 11124577889999875 43 89999999999999999996
No 12
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.55 E-value=1.1e-14 Score=123.79 Aligned_cols=130 Identities=15% Similarity=0.200 Sum_probs=94.1
Q ss_pred EEccCC---CEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCC
Q psy10801 2 DGSADG---TQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWW 78 (153)
Q Consensus 2 V~t~~G---~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW 78 (153)
|++.+| ++++||+||+|+|+.+|+. |.| +||+.+++++++ +.|+...||++.|+++||
T Consensus 272 v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~~~l~~---------------~~~~~~~kv~l~~~~~~w 332 (489)
T 2jae_A 272 VEYTAGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVLTALKA---------------AKPSSSGKLGIEYSRRWW 332 (489)
T ss_dssp EEEEETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHHHHHHT---------------EECCCEEEEEEEESSCHH
T ss_pred EEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHHHHHHh---------------CCCccceEEEEEeCCCCc
Confidence 556666 6899999999999999975 666 799999999999 999999999999999999
Q ss_pred CCCCCce-EEEeccCCccc------cc-cCC------C--cc------cccccHHHHHHHHHHHHHHHhCCCCCCCCCeE
Q psy10801 79 PEDYQGF-HFFWTQHDEQT------LF-KDM------A--HP------EIFDFEKVLQADIMRLFRHFLGGAYIIPEPIR 136 (153)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~------~~-~~~------~--~~------~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~ 136 (153)
+++...+ +..+++.+... .. ... + .+ .+.+ +++++.+++.|++++|.. ...+|..
T Consensus 333 ~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~--~~~~~~~l~~L~~~~~~~-~~~~~~~ 409 (489)
T 2jae_A 333 ETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTH--RQRLAKAIAEGSEIHGEK-YTRDISS 409 (489)
T ss_dssp HHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCH--HHHHHHHHHHHHHHHCGG-GGSSEEE
T ss_pred cCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCH--HHHHHHHHHHHHHHcCcc-hhhhccc
Confidence 7642222 11122211100 00 000 0 00 1112 788899999999999862 1457888
Q ss_pred EEEecCCCCCCCCcCCC
Q psy10801 137 IVRSVWSINPHFRGSYR 153 (153)
Q Consensus 137 ~~~~~W~~dp~~~Gsys 153 (153)
...++|..+||++|+|+
T Consensus 410 ~~~~~W~~~~~~~G~~~ 426 (489)
T 2jae_A 410 SFSGSWRRTKYSESAWA 426 (489)
T ss_dssp EEEEEGGGSTTTSCSSC
T ss_pred cEEEEcCCCCCCCCcch
Confidence 88999999999999985
No 13
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.44 E-value=3.1e-14 Score=128.99 Aligned_cols=133 Identities=14% Similarity=0.176 Sum_probs=89.7
Q ss_pred EccCCC--EEEcCEEEEecChHHHhh----CCcc-------c--------------cCC-C-c-------HHHHHHHHcc
Q psy10801 3 GSADGT--QYSADRILITVSLGVLKS----NLIT-------F--------------VPP-L-P-------PKNLNAIKGL 46 (153)
Q Consensus 3 ~t~~G~--~~~ad~vIvTvPl~vLk~----~~i~-------F--------------~P~-L-p-------~~k~~ai~~~ 46 (153)
.+.+|+ +++||+||||+|+++|+. ..|. | .|| | | +.|++||++
T Consensus 392 ~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~- 470 (721)
T 3ayj_A 392 YDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQ- 470 (721)
T ss_dssp EETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHT-
T ss_pred EecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHh-
Confidence 456787 899999999999999964 3466 4 455 6 9 999999999
Q ss_pred cccccceeEeeeeeeeeccccEEEEEe-----CCCCCCCC-CCceEEEeccCCcc--------------------ccccC
Q psy10801 47 AVETSVLYFVLFQGLAFGTIDKIFIRF-----PKKWWPED-YQGFHFFWTQHDEQ--------------------TLFKD 100 (153)
Q Consensus 47 ~~~~~~~~~~~~~~l~~g~~~Ki~l~f-----~~~fW~~~-~~~~~~~~~~~~~~--------------------~~~~~ 100 (153)
++|+...||+++| +++||+++ ...+...+++.+.. .+.+.
T Consensus 471 --------------l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sY 536 (721)
T 3ayj_A 471 --------------LHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASY 536 (721)
T ss_dssp --------------CCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEE
T ss_pred --------------cCcccceEEEEEEccccCCCCcccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEE
Confidence 9999999999999 99999876 11111222221110 01111
Q ss_pred CCccc---c------cccH-HHH-------HHHHHHHHH--HHhCCCCC---------C-C--CCeEEEEecCCCCCCCC
Q psy10801 101 MAHPE---I------FDFE-KVL-------QADIMRLFR--HFLGGAYI---------I-P--EPIRIVRSVWSINPHFR 149 (153)
Q Consensus 101 ~~~~~---l------~~f~-~~~-------~~~~~~~L~--~~~g~~~~---------~-~--~p~~~~~~~W~~dp~~~ 149 (153)
.|... + ..+. +++ ++.+++.|. +++|+. . + . .+.+++.++|..|| ++
T Consensus 537 twg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~-~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~ 614 (721)
T 3ayj_A 537 TWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGA-SNAQPWWFYQLLAEARTADRFVFDWTTNK-TA 614 (721)
T ss_dssp EETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTC-SSCEECHHHHHHHTSCSTTCEEEEGGGST-TS
T ss_pred eCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCccc-cccccchhhhhhhhcccCceEEEeCCCCC-CC
Confidence 12211 1 0011 333 888999998 888752 1 0 1 24567999999999 99
Q ss_pred cCC
Q psy10801 150 GSY 152 (153)
Q Consensus 150 Gsy 152 (153)
|+|
T Consensus 615 Gaf 617 (721)
T 3ayj_A 615 GGF 617 (721)
T ss_dssp SSE
T ss_pred Ccc
Confidence 987
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.14 E-value=2.1e-10 Score=95.77 Aligned_cols=118 Identities=14% Similarity=0.240 Sum_probs=86.0
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|+|++|++++||+||+|+|+.+++. +.+.|++ .+++++ +.++...|+.+.|+++||+.+
T Consensus 268 v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~~----~~~~~~---------------~~~~~~~~v~l~~~~~~~~~~ 326 (470)
T 3i6d_A 268 LELDNGVTLDADSVIVTAPHKAAAG--MLSELPA----ISHLKN---------------MHSTSVANVALGFPEGSVQME 326 (470)
T ss_dssp EEESSSCEEEESEEEECSCHHHHHH--HTTTSTT----HHHHHT---------------CEEEEEEEEEEEESSTTCCCS
T ss_pred EEECCCCEEECCEEEECCCHHHHHH--HcCCchh----hHHHhc---------------CCCCceEEEEEEECchhcCCC
Confidence 6788999999999999999999986 6566543 578899 999999999999999999865
Q ss_pred CCceEEEeccCCc--------------------cc-c---ccCCCcc---cccccHHHHHHHHHHHHHHHhCCCCCCCCC
Q psy10801 82 YQGFHFFWTQHDE--------------------QT-L---FKDMAHP---EIFDFEKVLQADIMRLFRHFLGGAYIIPEP 134 (153)
Q Consensus 82 ~~~~~~~~~~~~~--------------------~~-~---~~~~~~~---~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p 134 (153)
..+++.+...... .. + .+..+.. .+.+ +++++.+++.|+++||. .++|
T Consensus 327 ~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g~---~~~p 401 (470)
T 3i6d_A 327 HEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSD--NDIINIVLEDLKKVMNI---NGEP 401 (470)
T ss_dssp SCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCH--HHHHHHHHHHHGGGSCC---CSCC
T ss_pred CCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCH--HHHHHHHHHHHHHHhCC---CCCc
Confidence 4444444332111 00 0 0111111 2223 88999999999999985 3588
Q ss_pred eEEEEecCCCC
Q psy10801 135 IRIVRSVWSIN 145 (153)
Q Consensus 135 ~~~~~~~W~~d 145 (153)
..+..++|...
T Consensus 402 ~~~~~~~w~~a 412 (470)
T 3i6d_A 402 EMTCVTRWHES 412 (470)
T ss_dssp SEEEEEEEEEE
T ss_pred eEEEEEEcCCc
Confidence 89999999754
No 15
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.05 E-value=5.7e-10 Score=90.55 Aligned_cols=123 Identities=11% Similarity=0.126 Sum_probs=85.9
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|++.+|++++||+||+|+|...+..-.-.+.|+||+...+++++ +.|+...|+.+.|+++||.+.
T Consensus 144 v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~---------------~~~~~~~~v~l~~~~~~~~~~ 208 (342)
T 3qj4_A 144 VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEA---------------VSYSSRYALGLFYEAGTKIDV 208 (342)
T ss_dssp EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHT---------------CCBCCEEEEEEECSSCC--CC
T ss_pred EEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhc---------------CCccccEEEEEEECCCCccCC
Confidence 56788988999999999999988753224678899999999999 999999999999999999643
Q ss_pred -CCce--------EEE-eccCCcc-c-cc-cCC--------Ccc---cccccHHHHHHHHHHHHHHHhCCCCCCCCCeEE
Q psy10801 82 -YQGF--------HFF-WTQHDEQ-T-LF-KDM--------AHP---EIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRI 137 (153)
Q Consensus 82 -~~~~--------~~~-~~~~~~~-~-~~-~~~--------~~~---~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~ 137 (153)
..|+ ..+ ++..... . .. +.. |.. .+.+ +++++.+++.|++++|. .++|..+
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g~---~~~p~~~ 283 (342)
T 3qj4_A 209 PWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSI--EDVQELVFQQLENILPG---LPQPIAT 283 (342)
T ss_dssp SCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCH--HHHHHHHHHHHHHHSCS---CCCCSEE
T ss_pred ceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCH--HHHHHHHHHHHHHhccC---CCCCcee
Confidence 2222 211 1110000 0 00 000 111 1222 88999999999999984 6689999
Q ss_pred EEecCCC
Q psy10801 138 VRSVWSI 144 (153)
Q Consensus 138 ~~~~W~~ 144 (153)
.+++|..
T Consensus 284 ~v~rW~~ 290 (342)
T 3qj4_A 284 KCQKWRH 290 (342)
T ss_dssp EEEEETT
T ss_pred eeccccc
Confidence 9999974
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.93 E-value=6.4e-09 Score=87.70 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=85.3
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|+|.+| +++||+||+|+|..+++. +.+.|++ +++++ +.++...|+.+.|+++|+ ..
T Consensus 269 v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~-----~~~~~---------------~~~~~~~~v~l~~~~~~~-~~ 324 (475)
T 3lov_A 269 LKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL-----PELEQ---------------LTTHSTATVTMIFDQQQS-LP 324 (475)
T ss_dssp EECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-----HHHHT---------------CCEEEEEEEEEEEECCSS-CS
T ss_pred EEECCC-eEECCEEEECCCHHHHHH--HcCccCH-----HHHhc---------------CCCCeEEEEEEEECCcCC-CC
Confidence 678889 899999999999999986 6666655 78888 999999999999999983 33
Q ss_pred CCceEEEeccCCc-------------------cc-cc---cCCCc---ccccccHHHHHHHHHHHHHHHhCCCCCCCCCe
Q psy10801 82 YQGFHFFWTQHDE-------------------QT-LF---KDMAH---PEIFDFEKVLQADIMRLFRHFLGGAYIIPEPI 135 (153)
Q Consensus 82 ~~~~~~~~~~~~~-------------------~~-~~---~~~~~---~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~ 135 (153)
..+++.+....+. .. +. +.... ..+.+ +++++.+++.|+++||. .++|.
T Consensus 325 ~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~--e~~~~~~~~~L~~~~g~---~~~p~ 399 (475)
T 3lov_A 325 IEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESD--EVLQQAVLQDLEKICGR---TLEPK 399 (475)
T ss_dssp SSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCH--HHHHHHHHHHHHHHHSS---CCCCS
T ss_pred CCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCH--HHHHHHHHHHHHHHhCC---CCCCe
Confidence 3444443322111 00 00 00011 11223 78999999999999986 24889
Q ss_pred EEEEecCCCC--CCCCc
Q psy10801 136 RIVRSVWSIN--PHFRG 150 (153)
Q Consensus 136 ~~~~~~W~~d--p~~~G 150 (153)
...+++|..+ .|..|
T Consensus 400 ~~~v~~w~~a~p~~~~g 416 (475)
T 3lov_A 400 QVIISRLMDGLPAYTVG 416 (475)
T ss_dssp EEEEEEEEEEEECCCTT
T ss_pred EEEEEEcccCCCCCCCC
Confidence 9999999976 56555
No 17
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.83 E-value=1.2e-08 Score=85.86 Aligned_cols=118 Identities=14% Similarity=0.284 Sum_probs=82.8
Q ss_pred cCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCCCCc
Q psy10801 5 ADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPEDYQG 84 (153)
Q Consensus 5 ~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~~~~ 84 (153)
.+|++++||+||+|+|+.++++ +.|+||+.+++++++ +.++...|+++.|++++|+.. .+
T Consensus 276 ~~g~~~~ad~vV~a~~~~~~~~----ll~~l~~~~~~~l~~---------------~~~~~~~~v~l~~~~~~~~~~-~~ 335 (478)
T 2ivd_A 276 GRRAELSVAQVVLAAPAHATAK----LLRPLDDALAALVAG---------------IAYAPIAVVHLGFDAGTLPAP-DG 335 (478)
T ss_dssp TEEEEEECSEEEECSCHHHHHH----HHTTTCHHHHHHHHT---------------CCBCCEEEEEEEECTTSSCCC-CS
T ss_pred CCCceEEcCEEEECCCHHHHHH----HhhccCHHHHHHHhc---------------CCCCcEEEEEEEEccccCCCC-Cc
Confidence 6788899999999999999874 338899999999999 999999999999999999863 22
Q ss_pred eEEE-------------eccCC-c-----c--cc---ccCCCcccccccH-HHHHHHHHHHHHHHhCCCCCCCCCeEEEE
Q psy10801 85 FHFF-------------WTQHD-E-----Q--TL---FKDMAHPEIFDFE-KVLQADIMRLFRHFLGGAYIIPEPIRIVR 139 (153)
Q Consensus 85 ~~~~-------------~~~~~-~-----~--~~---~~~~~~~~l~~f~-~~~~~~~~~~L~~~~g~~~~~~~p~~~~~ 139 (153)
++.+ |.... . . .+ .+..+...+.... +++.+.+++.|+++||.. .+|.....
T Consensus 336 ~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~p~~~~~ 412 (478)
T 2ivd_A 336 FGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT---ARPSFTRV 412 (478)
T ss_dssp SEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC---SCCSEEEE
T ss_pred eEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC---CCCcEEEE
Confidence 2222 21110 0 0 00 0000111111111 788899999999999862 37888888
Q ss_pred ecCCCC
Q psy10801 140 SVWSIN 145 (153)
Q Consensus 140 ~~W~~d 145 (153)
++|...
T Consensus 413 ~~w~~~ 418 (478)
T 2ivd_A 413 FRWPLG 418 (478)
T ss_dssp EEESSC
T ss_pred EECCCc
Confidence 999864
No 18
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.71 E-value=5.1e-09 Score=88.96 Aligned_cols=120 Identities=17% Similarity=0.270 Sum_probs=79.3
Q ss_pred CEEEcCEEEEecChHHHhhCCccc---cCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCCCCc
Q psy10801 8 TQYSADRILITVSLGVLKSNLITF---VPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPEDYQG 84 (153)
Q Consensus 8 ~~~~ad~vIvTvPl~vLk~~~i~F---~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~~~~ 84 (153)
++++||+||+|+|+.+++. +.+ .+++++.. +++ +.++...|+.+.|+++||+....+
T Consensus 293 ~~~~ad~VI~a~p~~~l~~--ll~~~~~~~~~~~~---l~~---------------~~~~~~~~v~l~~~~~~~~~~~~~ 352 (504)
T 1sez_A 293 EEESFDAVIMTAPLCDVKS--MKIAKRGNPFLLNF---IPE---------------VDYVPLSVVITTFKRENVKYPLEG 352 (504)
T ss_dssp CCCEESEEEECSCHHHHHT--SEEESSSSBCCCTT---SCC---------------CCEEEEEEEEEEEEGGGBSSCCCS
T ss_pred eeEECCEEEECCCHHHHHH--HhhcccCCcccHHH---Hhc---------------CCCCceEEEEEEEchhhcCCCCCc
Confidence 6899999999999999986 433 24565432 556 888899999999999999865444
Q ss_pred eEEEeccCCc----c-------------------c-cc----cCCC--cccccccHHHHHHHHHHHHHHHhCCCCCCCCC
Q psy10801 85 FHFFWTQHDE----Q-------------------T-LF----KDMA--HPEIFDFEKVLQADIMRLFRHFLGGAYIIPEP 134 (153)
Q Consensus 85 ~~~~~~~~~~----~-------------------~-~~----~~~~--~~~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p 134 (153)
++++....+. . . +. +... ...+.+ +++++.+++.|++++|.. .+|
T Consensus 353 ~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~--ee~~~~v~~~L~~~~g~~---~~p 427 (504)
T 1sez_A 353 FGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASR--TELKEIVTSDLKQLLGAE---GEP 427 (504)
T ss_dssp SEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCH--HHHHHHHHHHHHHHHCBC---SCC
T ss_pred eEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCH--HHHHHHHHHHHHHHhCCC---CCC
Confidence 4443322110 0 0 00 0000 001222 789999999999999862 368
Q ss_pred eEEEEecCCCC-CCCCcCC
Q psy10801 135 IRIVRSVWSIN-PHFRGSY 152 (153)
Q Consensus 135 ~~~~~~~W~~d-p~~~Gsy 152 (153)
..+..++|..+ |...++|
T Consensus 428 ~~~~~~~w~~~~p~~~~g~ 446 (504)
T 1sez_A 428 TYVNHLYWSKAFPLYGHNY 446 (504)
T ss_dssp SSEEEEEEEEEEECCCTTH
T ss_pred eEEEEeECCCCCCccCcCH
Confidence 88899999876 5443333
No 19
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.48 E-value=8.7e-07 Score=74.37 Aligned_cols=117 Identities=10% Similarity=0.105 Sum_probs=78.8
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPED 81 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~~ 81 (153)
|++ +|.++.||+||+|+|..+++. ..|++++...+++++ +.++...|+.+.|++++|+.+
T Consensus 270 v~~-~~~~~~ad~vv~a~p~~~~~~----ll~~~~~~~~~~l~~---------------~~~~~~~~v~l~~~~~~~~~~ 329 (477)
T 3nks_A 270 VSL-RDSSLEADHVISAIPASVLSE----LLPAEAAPLARALSA---------------ITAVSVAVVNLQYQGAHLPVQ 329 (477)
T ss_dssp EEC-SSCEEEESEEEECSCHHHHHH----HSCGGGHHHHHHHHT---------------CCEEEEEEEEEEETTCCCSSC
T ss_pred EEE-CCeEEEcCEEEECCCHHHHHH----hccccCHHHHHHHhc---------------CCCCcEEEEEEEECCCCCCCC
Confidence 444 555899999999999999875 345567778889999 999999999999999999754
Q ss_pred CCce-----------EEEeccCCc--------cc-cc---cCCCcc-------cccccHHHHHHHHHHHHHHHhCCCCCC
Q psy10801 82 YQGF-----------HFFWTQHDE--------QT-LF---KDMAHP-------EIFDFEKVLQADIMRLFRHFLGGAYII 131 (153)
Q Consensus 82 ~~~~-----------~~~~~~~~~--------~~-~~---~~~~~~-------~l~~f~~~~~~~~~~~L~~~~g~~~~~ 131 (153)
..++ +.+++.... .. +. +..|.. .+.+ +++++.+++.|++++|. .
T Consensus 330 ~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~~g~---~ 404 (477)
T 3nks_A 330 GFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQ--ELFQQRAQEAAATQLGL---K 404 (477)
T ss_dssp SSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCH--HHHHHHHHHHHHHHHCC---C
T ss_pred CceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCH--HHHHHHHHHHHHHHhCC---C
Confidence 3222 111111000 00 00 000000 1133 78889999999999985 3
Q ss_pred CCCeEEEEecCC
Q psy10801 132 PEPIRIVRSVWS 143 (153)
Q Consensus 132 ~~p~~~~~~~W~ 143 (153)
++|....+++|.
T Consensus 405 ~~~~~~~v~rw~ 416 (477)
T 3nks_A 405 EMPSHCLVHLHK 416 (477)
T ss_dssp SCCSEEEEEEEE
T ss_pred CCCcEEEEEEcC
Confidence 578888888885
No 20
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.99 E-value=2.2e-05 Score=62.44 Aligned_cols=118 Identities=11% Similarity=0.194 Sum_probs=77.7
Q ss_pred EEccCCCEEE-cCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCCC
Q psy10801 2 DGSADGTQYS-ADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWPE 80 (153)
Q Consensus 2 V~t~~G~~~~-ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~~ 80 (153)
|++.+|+.+. ||+||+|.|...+.. .+.+.| ....++++ +.|+...++.+.|++++|..
T Consensus 140 v~~~~g~~~~~a~~vV~a~g~~~~~~-~~~~~~----~l~~~~~~---------------~~~~~~~~~~~~~~~~~~~~ 199 (336)
T 1yvv_A 140 LLDAEGQNHGPFSHVIIATPAPQAST-LLAAAP----KLASVVAG---------------VKMDPTWAVALAFETPLQTP 199 (336)
T ss_dssp EEETTSCEEEEESEEEECSCHHHHGG-GGTTCH----HHHHHHTT---------------CCEEEEEEEEEEESSCCSCC
T ss_pred EEeCCCcCccccCEEEEcCCHHHHHH-hhccCH----HHHHHHhh---------------cCccceeEEEEEecCCCCCC
Confidence 5678898775 999999999998764 233433 34577888 99999999999999999864
Q ss_pred CC------CceEEEeccCCccccccC----CCc------c---cccccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEEec
Q psy10801 81 DY------QGFHFFWTQHDEQTLFKD----MAH------P---EIFDFEKVLQADIMRLFRHFLGGAYIIPEPIRIVRSV 141 (153)
Q Consensus 81 ~~------~~~~~~~~~~~~~~~~~~----~~~------~---~l~~f~~~~~~~~~~~L~~~~g~~~~~~~p~~~~~~~ 141 (153)
.. ..+.+++.......-.+. .|. . .+.+ +++.+.+++.|++++|. ..+.|.....++
T Consensus 200 ~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~lg~--~~~~p~~~~~~r 275 (336)
T 1yvv_A 200 MQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASR--EQVIEHLHGAFAELIDC--TMPAPVFSLAHR 275 (336)
T ss_dssp CCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCH--HHHHHHHHHHHHTTCSS--CCCCCSEEEEEE
T ss_pred CCeEEeCCCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCH--HHHHHHHHHHHHHHhCC--CCCCCcEEEccc
Confidence 21 112333332211000000 010 1 1222 77889999999999986 466787778888
Q ss_pred CC
Q psy10801 142 WS 143 (153)
Q Consensus 142 W~ 143 (153)
|.
T Consensus 276 w~ 277 (336)
T 1yvv_A 276 WL 277 (336)
T ss_dssp EE
T ss_pred cC
Confidence 85
No 21
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.60 E-value=2.4e-05 Score=59.32 Aligned_cols=41 Identities=12% Similarity=0.036 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCeEE--EEecCCCCCCCCcCCC
Q psy10801 111 KVLQADIMRLFRHFLGGAYIIPEPIRI--VRSVWSINPHFRGSYR 153 (153)
Q Consensus 111 ~~~~~~~~~~L~~~~g~~~~~~~p~~~--~~~~W~~dp~~~Gsys 153 (153)
+++++.++++|+++||.. +..+..+ ..++|.+|||++|+|+
T Consensus 57 ~e~~~~~l~~L~~~~g~~--~~~~~~~~~~~~~W~~dp~~~Ga~s 99 (181)
T 2e1m_C 57 AERYGYALENLQSVHGRR--IEVFYTGAGQTQSWLRDPYACGEAA 99 (181)
T ss_dssp TTTHHHHHHHHHHHHCGG--GGGTEEEEEEEEESSSCTTTSSSEE
T ss_pred HHHHHHHHHHHHHHhCCC--cHhhccCcceecccCCCCCCCCccc
Confidence 788999999999999863 5344478 9999999999999985
No 22
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.48 E-value=0.0012 Score=54.21 Aligned_cols=62 Identities=11% Similarity=-0.033 Sum_probs=48.5
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCC--cHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPL--PPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWWP 79 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~L--p~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW~ 79 (153)
|++ +|++++||+||+|+|...+.. .+...+.+ |+...+++++ +.++...|+.+.|+++.|.
T Consensus 232 v~~-~g~~~~ad~VV~a~~~~~~~~-ll~~~~~~~~~~~~~~~~~~---------------~~~~~~~~v~l~~~~~~~~ 294 (425)
T 3ka7_A 232 IIA-DDRIHDADLVISNLGHAATAV-LCSEALSKEADAAYFKMVGT---------------LQPSAGIKICLAADEPLVG 294 (425)
T ss_dssp EEE-TTEEEECSEEEECSCHHHHHH-HTTTTCCTTTTHHHHHHHHH---------------CCCBEEEEEEEEESSCSSC
T ss_pred EEE-CCEEEECCEEEECCCHHHHHH-hcCCcccccCCHHHHHHhhC---------------cCCCceEEEEeecCCCccC
Confidence 344 477899999999999998875 23334444 8888889998 8888889999999998764
Q ss_pred C
Q psy10801 80 E 80 (153)
Q Consensus 80 ~ 80 (153)
.
T Consensus 295 ~ 295 (425)
T 3ka7_A 295 H 295 (425)
T ss_dssp S
T ss_pred c
Confidence 3
No 23
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.45 E-value=0.00069 Score=56.91 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=41.1
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKW 77 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~f 77 (153)
|++.||+++.||+||+|+|+.+|.. + . + ++....+.+. +.+....-|.+.++...
T Consensus 255 v~~~~G~~~~ad~vI~t~P~~~l~~--~-l-~--~~~~~~~~~~---------------l~y~~~~~v~l~~~~~~ 309 (513)
T 4gde_A 255 VTLQDGTTIGYKKLVSTMAVDFLAE--A-M-N--DQELVGLTKQ---------------LFYSSTHVIGVGVRGSR 309 (513)
T ss_dssp EEETTSCEEEEEEEEECSCHHHHHH--H-T-T--CHHHHHHHTT---------------CCEEEEEEEEEEEESSC
T ss_pred EEEcCCCEEECCEEEECCCHHHHHH--h-c-C--chhhHhhhhc---------------ccCCceEEEEEEEeccc
Confidence 5678999999999999999999975 2 1 2 3444566677 77777777777776543
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.35 E-value=0.00025 Score=60.71 Aligned_cols=60 Identities=13% Similarity=-0.041 Sum_probs=50.0
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCC
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKK 76 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~ 76 (153)
|++.+|+++.||+||+|+|+..+........|++|+...+++++ +.+.+..++.+.|+++
T Consensus 249 v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~---------------l~y~s~~~v~l~~~~~ 308 (484)
T 4dsg_A 249 ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADK---------------MVYSSTNVIGIGVKGT 308 (484)
T ss_dssp EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHH---------------CCEEEEEEEEEEEESC
T ss_pred EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhC---------------CCcCceEEEEEEEcCC
Confidence 45678989999999999999998752112346799999999999 9999999999999875
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.46 E-value=0.028 Score=46.09 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=28.6
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHc
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKG 45 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~ 45 (153)
|++.+|+ ++||+||+|+|+..+. .+.|++|+.+. ++.+
T Consensus 238 v~~~~g~-~~ad~Vv~a~~~~~~~----~~l~~~~~~~~-~~~~ 275 (424)
T 2b9w_A 238 IHTTDWD-RESDVLVLTVPLEKFL----DYSDADDDERE-YFSK 275 (424)
T ss_dssp EEESSCE-EEESEEEECSCHHHHT----TSBCCCHHHHH-HHTT
T ss_pred EEECCCe-EEcCEEEECCCHHHHh----hccCCCHHHHH-HHhc
Confidence 5677774 9999999999999873 45677777654 4555
No 26
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.33 E-value=0.026 Score=46.37 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=46.1
Q ss_pred ccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHcccccccceeEeeeeeeeeccccEEEEEeCCCCC
Q psy10801 4 SADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKGLAVETSVLYFVLFQGLAFGTIDKIFIRFPKKWW 78 (153)
Q Consensus 4 t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~~~~~~~~~~~~~~~~l~~g~~~Ki~l~f~~~fW 78 (153)
+.+|++++||+||+|+|+..+.+ +.=.+.+|+...+++++ +.++...++.+.++++..
T Consensus 224 ~~~g~~~~ad~Vv~a~~~~~~~~--ll~~~~~~~~~~~~~~~---------------~~~~~~~~v~l~~~~~~~ 281 (421)
T 3nrn_A 224 TRDNEEYSFDVAISNVGVRETVK--LIGRDYFDRDYLKQVDS---------------IEPSEGIKFNLAVPGEPR 281 (421)
T ss_dssp ETTCCEEECSEEEECSCHHHHHH--HHCGGGSCHHHHHHHHT---------------CCCCCEEEEEEEEESSCS
T ss_pred EeCCcEEEeCEEEECCCHHHHHH--hcCcccCCHHHHHHHhC---------------CCCCceEEEEEEEcCCcc
Confidence 35678999999999999998864 22124688888888999 888888899999988743
No 27
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=90.44 E-value=0.26 Score=41.11 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=17.8
Q ss_pred EEccCCCEEEcCEEEEecChHHHhhCCccccCCCcHHHHHHHHc
Q psy10801 2 DGSADGTQYSADRILITVSLGVLKSNLITFVPPLPPKNLNAIKG 45 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl~vLk~~~i~F~P~Lp~~k~~ai~~ 45 (153)
|+++||+++.||+||++.++..+-...+.-. +++....+.+++
T Consensus 257 V~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~-~~~~~~~~~~~~ 299 (501)
T 4dgk_A 257 VHLEDGRRFLTQAVASNADVVHTYRDLLSQH-PAAVKQSNKLQT 299 (501)
T ss_dssp EEETTSCEEECSCEEECCC-------------------------
T ss_pred EEecCCcEEEcCEEEECCCHHHHHHHhcccc-ccchhhhhhhhc
Confidence 6789999999999999998765433222222 344444555555
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=47.85 E-value=13 Score=30.26 Aligned_cols=16 Identities=19% Similarity=0.100 Sum_probs=14.2
Q ss_pred EcCEEEEecChHHHhh
Q psy10801 11 SADRILITVSLGVLKS 26 (153)
Q Consensus 11 ~ad~vIvTvPl~vLk~ 26 (153)
+||+||+|+|+..+.+
T Consensus 237 ~aD~VI~t~p~~~l~~ 252 (399)
T 1v0j_A 237 PAAPVVYTGPLDRYFD 252 (399)
T ss_dssp TTCCEEECSCHHHHTT
T ss_pred cCCEEEECCcHHHHHh
Confidence 6999999999998864
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=47.00 E-value=10 Score=30.74 Aligned_cols=20 Identities=25% Similarity=0.443 Sum_probs=17.0
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|+|.+|++++||+||+|.=.
T Consensus 200 V~t~~G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 200 AVTADGKIWRAERTFLCAGA 219 (438)
T ss_dssp EEETTTEEEECSEEEECCGG
T ss_pred EEECCCCEEECCEEEECCCC
Confidence 67889989999999999643
No 30
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=38.94 E-value=15 Score=28.09 Aligned_cols=18 Identities=33% Similarity=0.506 Sum_probs=15.7
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|.+.+|++++||+||+|.
T Consensus 96 v~~~~g~~~~a~~liiAT 113 (304)
T 4fk1_A 96 IVTKDHTKYLAERVLLAT 113 (304)
T ss_dssp EEETTCCEEEEEEEEECC
T ss_pred EEECCCCEEEeCEEEEcc
Confidence 567889999999999985
No 31
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=36.68 E-value=16 Score=31.14 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=16.6
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+|+++.||+||++..
T Consensus 293 V~~~~G~~i~Ad~VI~a~~ 311 (475)
T 3p1w_A 293 IKSSDGEIAYCDKVICDPS 311 (475)
T ss_dssp EEETTSCEEEEEEEEECGG
T ss_pred EEECCCcEEECCEEEECCC
Confidence 5688899999999999973
No 32
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=36.06 E-value=19 Score=26.74 Aligned_cols=20 Identities=10% Similarity=0.280 Sum_probs=16.4
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|.+.+|++++||+||+|.=.
T Consensus 104 v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 104 VRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp EEETTSCCEECSEEEECCTT
T ss_pred EEECCCCEEECCEEEECCCC
Confidence 56778889999999999643
No 33
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=35.50 E-value=23 Score=28.19 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=17.6
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.+|+++.||.||++.|.
T Consensus 237 v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 237 VETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp EEETTSCEEECSEEEECCCE
T ss_pred EEcCCCcEEEeeEEEEecCc
Confidence 67889999999999999764
No 34
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=35.45 E-value=22 Score=29.04 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=16.4
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++++|+++..|++|++.
T Consensus 88 V~~~~g~~i~YD~LViAt 105 (430)
T 3hyw_A 88 VTTQSGKKIEYDYLVIAT 105 (430)
T ss_dssp EEETTCCEEECSEEEECC
T ss_pred EEECCCCEEECCEEEEeC
Confidence 788999999999999985
No 35
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=34.62 E-value=19 Score=29.59 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=15.7
Q ss_pred cCCCEEEcCEEEEecChH
Q psy10801 5 ADGTQYSADRILITVSLG 22 (153)
Q Consensus 5 ~~G~~~~ad~vIvTvPl~ 22 (153)
.+|+++.||+||+|.|+.
T Consensus 272 ~~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 272 SEGEVARCKQLICDPSYV 289 (433)
T ss_dssp ETTEEEECSEEEECGGGC
T ss_pred ECCeEEECCEEEECCCCC
Confidence 478899999999999874
No 36
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=33.24 E-value=22 Score=26.54 Aligned_cols=18 Identities=17% Similarity=0.350 Sum_probs=15.7
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++.+|+||++.
T Consensus 91 v~~~~g~~~~~d~vviAt 108 (297)
T 3fbs_A 91 VEIDGGRRETAGRLILAM 108 (297)
T ss_dssp EEETTSCEEEEEEEEECC
T ss_pred EEECCCCEEEcCEEEECC
Confidence 567889999999999985
No 37
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=32.39 E-value=26 Score=28.25 Aligned_cols=20 Identities=20% Similarity=0.408 Sum_probs=17.0
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 230 v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 230 VRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp EEESSSCEEECSEEEECSCC
T ss_pred EEeCCCCEEEcCEEEECCCC
Confidence 56789999999999998753
No 38
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=32.32 E-value=20 Score=29.59 Aligned_cols=17 Identities=6% Similarity=-0.011 Sum_probs=14.7
Q ss_pred CCCEEEcCEEEEecChH
Q psy10801 6 DGTQYSADRILITVSLG 22 (153)
Q Consensus 6 ~G~~~~ad~vIvTvPl~ 22 (153)
+|+++.||+||+|.++.
T Consensus 283 ~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 283 KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp TTEEEECSCEEECGGGC
T ss_pred CCeEEECCEEEECCCcc
Confidence 57889999999998873
No 39
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=32.11 E-value=27 Score=28.12 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=17.1
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 220 V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 220 VVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp EEETTSCEEECSEEEECCCE
T ss_pred EEeCCCCEEEcCEEEECcCC
Confidence 56789999999999999753
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=32.06 E-value=22 Score=27.65 Aligned_cols=19 Identities=16% Similarity=0.209 Sum_probs=15.5
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|+|.+| +++||+||+|.=.
T Consensus 189 V~t~~g-~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 189 VRCDAG-SYRAAVLVNAAGA 207 (381)
T ss_dssp EECSSE-EEEESEEEECCGG
T ss_pred EEeCCC-EEEcCEEEECCCh
Confidence 567777 8999999999644
No 41
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=31.24 E-value=32 Score=27.58 Aligned_cols=20 Identities=15% Similarity=0.130 Sum_probs=17.1
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|.++||+++.||.||++.+.
T Consensus 249 v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 249 IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp EEETTSCEEECSEEEEECCE
T ss_pred EEECCCCEEeeeEEEECCCC
Confidence 56788999999999999764
No 42
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=29.72 E-value=33 Score=27.75 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=17.3
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 220 v~~~dg~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 220 VMASDGRSFVADSALICVGA 239 (410)
T ss_dssp EEETTSCEEECSEEEECSCE
T ss_pred EEECCCCEEEcCEEEEeeCC
Confidence 56789999999999999754
No 43
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.06 E-value=32 Score=26.89 Aligned_cols=17 Identities=24% Similarity=0.126 Sum_probs=15.2
Q ss_pred EEccCCCEEEcCEEEEe
Q psy10801 2 DGSADGTQYSADRILIT 18 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvT 18 (153)
|+++||++++||.||-|
T Consensus 145 v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 145 IFFADGSHENVDVLVGA 161 (412)
T ss_dssp EEETTSCEEEESEEEEC
T ss_pred EEECCCCEEEeeEEEEC
Confidence 57789999999999987
No 44
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=28.43 E-value=31 Score=24.02 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=14.8
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+| ++.||.||+|.-
T Consensus 90 v~~~~g-~i~ad~vI~A~G 107 (180)
T 2ywl_A 90 VETEEG-VEKAERLLLCTH 107 (180)
T ss_dssp EECSSC-EEEEEEEEECCT
T ss_pred EEECCC-EEEECEEEECCC
Confidence 566778 899999999964
No 45
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=26.75 E-value=37 Score=28.98 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=16.9
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|.++||+++.+|.||+|.=+
T Consensus 363 v~~~dG~~~~~DvIV~ATGf 382 (540)
T 3gwf_A 363 VVTEDGVLHELDVLVFATGF 382 (540)
T ss_dssp EEETTCCEEECSEEEECCCB
T ss_pred EEcCCCCEEECCEEEECCcc
Confidence 56889999999999999543
No 46
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=26.63 E-value=41 Score=25.55 Aligned_cols=20 Identities=25% Similarity=0.296 Sum_probs=17.1
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|.+.||+++.||.||+++..
T Consensus 264 v~~~~g~~i~~D~vi~a~G~ 283 (357)
T 4a9w_A 264 MQWADGTERAFDAVIWCTGF 283 (357)
T ss_dssp EECTTSCEEECSEEEECCCB
T ss_pred eEECCCCEecCCEEEECCCc
Confidence 56779999999999999764
No 47
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=26.60 E-value=38 Score=27.37 Aligned_cols=18 Identities=11% Similarity=0.257 Sum_probs=15.9
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++.+|++|+|.
T Consensus 95 v~~~~g~~~~yd~lvlAt 112 (385)
T 3klj_A 95 VTLKSGEKIKYEKLIIAS 112 (385)
T ss_dssp EEETTSCEEECSEEEECC
T ss_pred EEECCCCEEECCEEEEec
Confidence 677899999999999984
No 48
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=26.22 E-value=39 Score=26.66 Aligned_cols=18 Identities=22% Similarity=0.034 Sum_probs=15.7
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.||++++||.||.|-
T Consensus 139 v~~~~g~~~~ad~vV~Ad 156 (379)
T 3alj_A 139 LTLQTGEVLEADLIVGAD 156 (379)
T ss_dssp EEETTSCEEECSEEEECC
T ss_pred EEECCCCEEEcCEEEECC
Confidence 567889999999999985
No 49
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=26.21 E-value=41 Score=24.96 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=16.5
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.||+++.+|.||+++.
T Consensus 205 v~~~~g~~~~~D~vi~a~G 223 (297)
T 3fbs_A 205 VVLADGRSIALAGLFTQPK 223 (297)
T ss_dssp EEETTSCEEEESEEEECCE
T ss_pred EEeCCCCEEEEEEEEEccC
Confidence 5677899999999999975
No 50
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=25.52 E-value=17 Score=30.09 Aligned_cols=20 Identities=5% Similarity=-0.032 Sum_probs=16.8
Q ss_pred CCCEEEcCEEEEecChHHHh
Q psy10801 6 DGTQYSADRILITVSLGVLK 25 (153)
Q Consensus 6 ~G~~~~ad~vIvTvPl~vLk 25 (153)
.+..+.||+||+|+|+..+-
T Consensus 246 ~~~~~~~d~vI~T~P~d~~~ 265 (397)
T 3hdq_A 246 IADFIPFQHMIYTGPVDAFF 265 (397)
T ss_dssp TTTTSCEEEEEECSCHHHHT
T ss_pred ccccccCCEEEEcCCHHHHH
Confidence 45677899999999998874
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=25.14 E-value=41 Score=26.78 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=15.7
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.||++++||.||.|-
T Consensus 160 v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 160 VWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp EEETTSCEEEESEEEECC
T ss_pred EEEcCCCEEeeCEEEECC
Confidence 567899999999999984
No 52
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=24.74 E-value=35 Score=29.18 Aligned_cols=19 Identities=16% Similarity=0.249 Sum_probs=16.5
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+|++++||+||+|.=
T Consensus 138 V~~~~G~~i~ad~lV~AtG 156 (549)
T 4ap3_A 138 VRTDRGDEVSARFLVVAAG 156 (549)
T ss_dssp EEETTCCEEEEEEEEECCC
T ss_pred EEECCCCEEEeCEEEECcC
Confidence 6788999999999999854
No 53
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=24.73 E-value=43 Score=27.24 Aligned_cols=18 Identities=28% Similarity=0.313 Sum_probs=15.9
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++.+|++|++.
T Consensus 91 V~~~~g~~i~~d~lviAt 108 (437)
T 3sx6_A 91 ITLADGNTVHYDYLMIAT 108 (437)
T ss_dssp EEETTSCEEECSEEEECC
T ss_pred EEECCCCEEECCEEEECC
Confidence 677889899999999985
No 54
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=24.56 E-value=33 Score=26.33 Aligned_cols=20 Identities=10% Similarity=0.037 Sum_probs=15.6
Q ss_pred EEccCC--CEEEcCEEEEecCh
Q psy10801 2 DGSADG--TQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G--~~~~ad~vIvTvPl 21 (153)
|++.+| .+++||+||+|.=.
T Consensus 186 v~~~~g~~~~~~a~~VV~A~G~ 207 (369)
T 3dme_A 186 LDFGGAEPMTLSCRVLINAAGL 207 (369)
T ss_dssp EEECTTSCEEEEEEEEEECCGG
T ss_pred EEECCCceeEEEeCEEEECCCc
Confidence 556777 48999999999744
No 55
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=24.54 E-value=40 Score=29.31 Aligned_cols=20 Identities=10% Similarity=0.011 Sum_probs=16.6
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.+|.+++||+||+|.=.
T Consensus 452 V~t~~G~~i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 452 LNFAGDQQATHSVVVLANGH 471 (676)
T ss_dssp EEETTSCEEEESEEEECCGG
T ss_pred EEECCCCEEECCEEEECCCc
Confidence 56778889999999999743
No 56
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=23.94 E-value=33 Score=29.31 Aligned_cols=19 Identities=0% Similarity=-0.074 Sum_probs=16.5
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++++|++++||+||+|.=
T Consensus 126 V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 126 VTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp EEETTTEEEEEEEEEECCC
T ss_pred EEECCCCEEEeCEEEECcC
Confidence 6788999999999999854
No 57
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=23.89 E-value=37 Score=28.66 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=16.2
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+|++++||+||+|.=
T Consensus 133 V~~~~G~~~~ad~vV~AtG 151 (542)
T 1w4x_A 133 VDTNHGDRIRARYLIMASG 151 (542)
T ss_dssp EEETTCCEEEEEEEEECCC
T ss_pred EEECCCCEEEeCEEEECcC
Confidence 6678899999999999863
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=23.80 E-value=40 Score=27.60 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=15.4
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|++++||.||+|.
T Consensus 170 V~~~~G~~i~Ad~VVlAt 187 (447)
T 2i0z_A 170 VILQTGEVLETNHVVIAV 187 (447)
T ss_dssp EEETTCCEEECSCEEECC
T ss_pred EEECCCCEEECCEEEECC
Confidence 567788889999999985
No 59
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=23.44 E-value=39 Score=26.78 Aligned_cols=19 Identities=11% Similarity=-0.004 Sum_probs=16.0
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.||++++||.||.|-=
T Consensus 145 v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 145 VRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp EEETTSCEEEEEEEEECCC
T ss_pred EEECCCCEEECCEEEECCC
Confidence 5678899999999999863
No 60
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=23.36 E-value=47 Score=26.38 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=16.5
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 222 v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 222 AHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp EEETTSCEEEESEEEECSCE
T ss_pred EEECCCCEEECCEEEECcCC
Confidence 45678999999999999753
No 61
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=23.35 E-value=41 Score=25.37 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.2
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++.+|++|++.
T Consensus 94 v~~~~g~~~~~~~lv~At 111 (310)
T 1fl2_A 94 IETASGAVLKARSIIVAT 111 (310)
T ss_dssp EEETTSCEEEEEEEEECC
T ss_pred EEECCCCEEEeCEEEECc
Confidence 466788899999999985
No 62
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=23.20 E-value=47 Score=26.42 Aligned_cols=18 Identities=22% Similarity=0.182 Sum_probs=15.6
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.||++++||.||.|-
T Consensus 132 v~~~~g~~~~ad~vV~Ad 149 (397)
T 2vou_A 132 MRFSDGTKAEANWVIGAD 149 (397)
T ss_dssp EEETTSCEEEESEEEECC
T ss_pred EEECCCCEEECCEEEECC
Confidence 567889999999999984
No 63
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=22.50 E-value=40 Score=28.72 Aligned_cols=19 Identities=21% Similarity=0.314 Sum_probs=16.4
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+|++++||+||+|.=
T Consensus 126 V~~~~G~~i~ad~lV~AtG 144 (540)
T 3gwf_A 126 VTTDHGEVYRAKYVVNAVG 144 (540)
T ss_dssp EEETTSCEEEEEEEEECCC
T ss_pred EEEcCCCEEEeCEEEECCc
Confidence 6788999999999999853
No 64
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=22.27 E-value=54 Score=26.43 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=16.9
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 218 v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 218 VLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp EEETTSCEEECSEEEECSCE
T ss_pred EEECCCCEEEcCEEEECcCC
Confidence 56778999999999999753
No 65
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=22.16 E-value=43 Score=26.66 Aligned_cols=19 Identities=11% Similarity=0.085 Sum_probs=16.0
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.||++++||.||.|-=
T Consensus 161 v~~~~g~~~~ad~vV~AdG 179 (398)
T 2xdo_A 161 LTFENKPSETADLVILANG 179 (398)
T ss_dssp EEETTSCCEEESEEEECSC
T ss_pred EEECCCcEEecCEEEECCC
Confidence 5677898999999999854
No 66
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=21.97 E-value=45 Score=25.45 Aligned_cols=18 Identities=22% Similarity=0.530 Sum_probs=15.1
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++++|+||+|.
T Consensus 100 v~~~~g~~~~~~~lv~At 117 (335)
T 2zbw_A 100 VTTSQGNAYTAKAVIIAA 117 (335)
T ss_dssp EEETTSCEEEEEEEEECC
T ss_pred EEECCCCEEEeCEEEECC
Confidence 567788899999999985
No 67
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=21.73 E-value=46 Score=24.94 Aligned_cols=18 Identities=11% Similarity=0.355 Sum_probs=15.3
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++.+|+||++.
T Consensus 104 v~~~~g~~~~~d~lvlAt 121 (323)
T 3f8d_A 104 VKTKRKGEFKADSVILGI 121 (323)
T ss_dssp EEESSSCEEEEEEEEECC
T ss_pred EEECCCCEEEcCEEEECc
Confidence 567788899999999984
No 68
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=21.45 E-value=53 Score=27.17 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=16.3
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.+|++++||.||.|-=.
T Consensus 209 v~~~~g~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 209 VHTKQHGEISGDLFVDCTGF 228 (511)
T ss_dssp EEESSSCEEECSEEEECCGG
T ss_pred EEECCCCEEEcCEEEECCCc
Confidence 56778889999999998643
No 69
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=20.85 E-value=55 Score=27.68 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=15.9
Q ss_pred EEccCCCEEEcCEEEEecC
Q psy10801 2 DGSADGTQYSADRILITVS 20 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvP 20 (153)
|++.+|++++||.||.|.=
T Consensus 231 v~~~~G~~i~ad~vI~A~G 249 (550)
T 2e4g_A 231 VRTATGRVFDADLFVDCSG 249 (550)
T ss_dssp EEETTSCEEECSEEEECCG
T ss_pred EEECCCCEEECCEEEECCC
Confidence 5677888999999999964
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=20.80 E-value=48 Score=25.72 Aligned_cols=18 Identities=22% Similarity=0.471 Sum_probs=15.3
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|++.+|+++++|+||++.
T Consensus 110 v~~~~g~~~~~~~li~At 127 (360)
T 3ab1_A 110 TRTNTGNVYRSRAVLIAA 127 (360)
T ss_dssp EEETTSCEEEEEEEEECC
T ss_pred EEECCCcEEEeeEEEEcc
Confidence 567788899999999985
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=20.76 E-value=55 Score=27.00 Aligned_cols=20 Identities=20% Similarity=0.331 Sum_probs=16.9
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.+|+++.||.||+++..
T Consensus 267 v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 267 VVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp EEETTSCEEEESEEEECCCE
T ss_pred EEECCCcEEEcCEEEEeeCC
Confidence 56778999999999998764
No 72
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=20.48 E-value=46 Score=25.39 Aligned_cols=18 Identities=11% Similarity=0.268 Sum_probs=14.7
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|.+.+|+++++|+||+|.
T Consensus 102 v~~~~g~~~~~~~vv~At 119 (325)
T 2q7v_A 102 TVRGYNGEYRAKAVILAT 119 (325)
T ss_dssp EEEESSCEEEEEEEEECC
T ss_pred EEECCCCEEEeCEEEECc
Confidence 456678899999999984
No 73
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=20.34 E-value=56 Score=29.03 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=15.6
Q ss_pred EEccCCCEEEcCEEEEec
Q psy10801 2 DGSADGTQYSADRILITV 19 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTv 19 (153)
|.+.+|+++.||.||+|.
T Consensus 159 V~t~dG~~i~AdaVVLAT 176 (637)
T 2zxi_A 159 VRTNLGVEYKTKAVVVTT 176 (637)
T ss_dssp EEETTSCEEECSEEEECC
T ss_pred EEECCCcEEEeCEEEEcc
Confidence 567789999999999985
No 74
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=20.17 E-value=49 Score=25.83 Aligned_cols=19 Identities=5% Similarity=0.046 Sum_probs=15.1
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|+|.+| +++||+||+|.=.
T Consensus 185 v~~~~g-~i~a~~VV~A~G~ 203 (382)
T 1y56_B 185 VKTNKG-IIKTGIVVNATNA 203 (382)
T ss_dssp EEETTE-EEECSEEEECCGG
T ss_pred EEECCc-EEECCEEEECcch
Confidence 566777 7999999999743
No 75
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=20.03 E-value=58 Score=27.11 Aligned_cols=20 Identities=30% Similarity=0.395 Sum_probs=16.7
Q ss_pred EEccCCCEEEcCEEEEecCh
Q psy10801 2 DGSADGTQYSADRILITVSL 21 (153)
Q Consensus 2 V~t~~G~~~~ad~vIvTvPl 21 (153)
|++.||+++.||.||+++..
T Consensus 261 v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 261 IKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp EEETTSCEEEESEEEECCCE
T ss_pred EEECCCCEEECCEEEECCCC
Confidence 45678999999999999754
Done!