Query psy10805
Match_columns 253
No_of_seqs 266 out of 1348
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 18:55:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10805.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10805hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3027|consensus 100.0 3.5E-34 7.7E-39 221.8 17.0 212 41-252 10-252 (257)
2 KOG4244|consensus 100.0 1.1E-30 2.4E-35 210.5 15.7 205 42-253 38-278 (281)
3 PLN02473 glutathione S-transfe 99.9 1.5E-26 3.3E-31 189.3 14.5 187 49-248 3-202 (214)
4 PRK09481 sspA stringent starva 99.9 7.6E-26 1.6E-30 184.9 17.5 176 48-248 10-193 (211)
5 PRK10387 glutaredoxin 2; Provi 99.9 8.5E-26 1.8E-30 184.2 11.6 182 49-249 1-205 (210)
6 COG0625 Gst Glutathione S-tran 99.9 4.1E-25 9E-30 180.5 14.0 183 49-248 1-195 (211)
7 KOG3028|consensus 99.9 3.1E-24 6.7E-29 177.4 17.7 196 57-253 9-239 (313)
8 KOG0406|consensus 99.9 1.8E-24 3.8E-29 174.4 14.6 184 47-248 8-202 (231)
9 PRK13972 GSH-dependent disulfi 99.9 6.2E-25 1.4E-29 180.0 12.0 178 49-248 2-196 (215)
10 TIGR00862 O-ClC intracellular 99.9 4.7E-24 1E-28 175.7 15.0 171 60-248 14-211 (236)
11 PLN02378 glutathione S-transfe 99.9 5.1E-24 1.1E-28 174.3 15.1 163 63-248 18-190 (213)
12 PLN02395 glutathione S-transfe 99.9 3.7E-24 7.9E-29 175.3 14.2 182 49-248 3-201 (215)
13 TIGR02182 GRXB Glutaredoxin, G 99.9 4.8E-24 1E-28 174.0 12.7 181 50-249 1-204 (209)
14 PRK11752 putative S-transferas 99.9 1.8E-23 3.8E-28 176.3 16.2 184 47-248 43-249 (264)
15 PRK10357 putative glutathione 99.9 2.2E-23 4.8E-28 169.1 16.2 180 49-248 1-191 (202)
16 PRK15113 glutathione S-transfe 99.9 2.2E-23 4.8E-28 170.6 15.2 179 48-248 5-199 (214)
17 PRK10542 glutathionine S-trans 99.9 2.9E-23 6.3E-28 168.2 14.8 166 66-248 9-188 (201)
18 TIGR01262 maiA maleylacetoacet 99.9 2E-23 4.4E-28 170.2 14.0 171 63-248 6-195 (210)
19 PTZ00057 glutathione s-transfe 99.9 1.3E-22 2.7E-27 165.1 17.4 173 48-248 4-190 (205)
20 PLN02817 glutathione dehydroge 99.9 9.4E-23 2E-27 171.4 14.8 162 63-248 71-242 (265)
21 KOG0868|consensus 99.9 6E-22 1.3E-26 150.8 10.0 177 47-247 4-197 (217)
22 cd03211 GST_C_Metaxin2 GST_C f 99.9 3.5E-21 7.6E-26 144.4 13.7 123 124-246 4-126 (126)
23 KOG0867|consensus 99.9 2.9E-21 6.3E-26 159.1 12.7 185 48-248 2-200 (226)
24 cd03212 GST_C_Metaxin1_3 GST_C 99.8 1.3E-20 2.8E-25 143.3 12.1 127 124-250 5-137 (137)
25 KOG4420|consensus 99.8 2.6E-20 5.6E-25 149.8 11.1 191 46-249 24-279 (325)
26 KOG1695|consensus 99.8 1.8E-17 3.9E-22 132.9 14.0 172 63-247 10-190 (206)
27 cd03080 GST_N_Metaxin_like GST 99.7 7.2E-18 1.6E-22 115.0 8.3 72 50-123 3-74 (75)
28 cd03079 GST_N_Metaxin2 GST_N f 99.7 9E-18 2E-22 112.9 7.7 74 49-122 1-74 (74)
29 cd03054 GST_N_Metaxin GST_N fa 99.7 2.8E-17 6E-22 111.2 8.5 71 50-122 2-72 (72)
30 KOG3029|consensus 99.7 2.1E-15 4.6E-20 122.9 16.5 67 46-120 88-158 (370)
31 cd03061 GST_N_CLIC GST_N famil 99.7 1.2E-16 2.6E-21 111.8 7.1 62 62-123 19-86 (91)
32 cd03041 GST_N_2GST_N GST_N fam 99.7 1.7E-16 3.8E-21 108.7 7.3 67 49-123 2-77 (77)
33 PLN02907 glutamate-tRNA ligase 99.7 8.1E-16 1.7E-20 144.5 13.6 152 49-249 3-158 (722)
34 PF13417 GST_N_3: Glutathione 99.7 1.7E-16 3.7E-21 108.2 6.7 61 63-123 5-71 (75)
35 cd03052 GST_N_GDAP1 GST_N fami 99.7 1.8E-16 3.9E-21 107.4 6.3 64 49-120 1-73 (73)
36 cd03038 GST_N_etherase_LigE GS 99.6 5.8E-16 1.3E-20 107.9 7.5 73 50-123 2-83 (84)
37 cd03059 GST_N_SspA GST_N famil 99.6 7.8E-16 1.7E-20 104.1 7.9 67 49-123 1-73 (73)
38 cd03058 GST_N_Tau GST_N family 99.6 8.5E-16 1.8E-20 104.4 7.3 67 49-123 1-74 (74)
39 cd03045 GST_N_Delta_Epsilon GS 99.6 8.9E-16 1.9E-20 104.2 6.8 65 49-121 1-74 (74)
40 cd03050 GST_N_Theta GST_N fami 99.6 1.2E-15 2.7E-20 104.1 7.4 67 49-123 1-76 (76)
41 cd03037 GST_N_GRX2 GST_N famil 99.6 1E-15 2.2E-20 103.1 6.9 65 49-121 1-71 (71)
42 cd03078 GST_N_Metaxin1_like GS 99.6 2.4E-15 5.1E-20 101.7 8.3 71 50-122 2-72 (73)
43 cd03053 GST_N_Phi GST_N family 99.6 1.7E-15 3.7E-20 103.3 6.7 66 49-122 2-76 (76)
44 cd03076 GST_N_Pi GST_N family, 99.6 2.8E-15 6.1E-20 101.6 7.4 66 49-122 2-73 (73)
45 cd03039 GST_N_Sigma_like GST_N 99.6 3.4E-15 7.3E-20 100.9 7.3 64 50-121 2-72 (72)
46 cd03040 GST_N_mPGES2 GST_N fam 99.6 3E-15 6.6E-20 102.4 5.7 67 48-122 1-75 (77)
47 cd03047 GST_N_2 GST_N family, 99.6 4.8E-15 1E-19 100.4 6.5 64 49-120 1-73 (73)
48 cd03060 GST_N_Omega_like GST_N 99.6 9.2E-15 2E-19 98.5 7.4 62 50-119 2-70 (71)
49 cd03056 GST_N_4 GST_N family, 99.6 1.1E-14 2.5E-19 98.3 7.3 64 49-120 1-73 (73)
50 PF13409 GST_N_2: Glutathione 99.6 1.9E-15 4.1E-20 101.5 3.4 59 64-122 1-70 (70)
51 cd03048 GST_N_Ure2p_like GST_N 99.6 1.2E-14 2.5E-19 100.5 7.5 66 49-123 2-79 (81)
52 cd03055 GST_N_Omega GST_N fami 99.5 1.1E-14 2.3E-19 102.6 6.5 68 45-120 15-89 (89)
53 cd03051 GST_N_GTT2_like GST_N 99.5 8.2E-15 1.8E-19 99.2 5.6 64 49-120 1-74 (74)
54 cd03077 GST_N_Alpha GST_N fami 99.5 1.8E-14 3.9E-19 99.1 6.4 67 49-123 2-76 (79)
55 cd03042 GST_N_Zeta GST_N famil 99.5 2.2E-14 4.8E-19 96.9 6.3 64 49-120 1-73 (73)
56 KOG1422|consensus 99.5 2.4E-14 5.2E-19 112.4 7.2 169 61-248 17-196 (221)
57 cd03049 GST_N_3 GST_N family, 99.5 1.9E-14 4.1E-19 97.4 5.7 64 49-120 1-73 (73)
58 cd03044 GST_N_EF1Bgamma GST_N 99.5 2.4E-14 5.3E-19 97.5 6.1 64 50-121 2-74 (75)
59 cd03075 GST_N_Mu GST_N family, 99.5 3E-14 6.6E-19 98.7 6.5 61 63-123 7-82 (82)
60 cd03043 GST_N_1 GST_N family, 99.5 7.1E-14 1.5E-18 94.6 7.0 58 63-120 8-73 (73)
61 cd03046 GST_N_GTT1_like GST_N 99.5 8.3E-14 1.8E-18 94.9 7.0 58 66-123 9-75 (76)
62 cd03057 GST_N_Beta GST_N famil 99.5 1.1E-13 2.5E-18 94.6 6.8 65 50-123 2-76 (77)
63 cd00570 GST_N_family Glutathio 99.4 5.4E-13 1.2E-17 88.6 7.7 63 50-120 2-71 (71)
64 PF02798 GST_N: Glutathione S- 99.4 2.1E-12 4.5E-17 88.1 7.1 57 65-121 9-76 (76)
65 COG2999 GrxB Glutaredoxin 2 [P 99.3 1.8E-11 4E-16 93.7 11.7 175 63-248 7-204 (215)
66 COG0435 ECM4 Predicted glutath 99.3 3.8E-13 8.2E-18 109.7 2.2 206 22-247 42-276 (324)
67 cd03193 GST_C_Metaxin GST_C fa 99.3 3.7E-11 8.1E-16 84.2 8.6 70 177-246 19-88 (88)
68 PF13410 GST_C_2: Glutathione 99.3 1.6E-11 3.4E-16 82.0 6.2 66 175-244 4-69 (69)
69 PF10568 Tom37: Outer mitochon 99.2 3.9E-11 8.5E-16 80.4 7.3 62 58-120 7-72 (72)
70 PF00043 GST_C: Glutathione S- 99.2 7.4E-11 1.6E-15 83.6 7.3 69 175-248 26-94 (95)
71 PF14497 GST_C_3: Glutathione 99.1 2.4E-10 5.2E-15 81.9 6.8 64 175-247 33-99 (99)
72 KOG2903|consensus 99.1 5.6E-11 1.2E-15 96.3 2.7 143 98-248 123-278 (319)
73 PF11801 Tom37_C: Tom37 C-term 99.1 6.2E-10 1.3E-14 87.2 8.2 115 116-230 3-165 (168)
74 cd03206 GST_C_7 GST_C family, 99.1 8.1E-10 1.8E-14 79.2 7.8 67 175-248 31-97 (100)
75 cd03189 GST_C_GTT1_like GST_C 99.1 6E-10 1.3E-14 82.4 7.2 65 177-248 54-118 (119)
76 cd03180 GST_C_2 GST_C family, 99.0 7.4E-10 1.6E-14 80.5 7.4 66 176-248 42-107 (110)
77 cd03187 GST_C_Phi GST_C family 99.0 1.1E-09 2.3E-14 80.7 8.0 68 176-248 44-111 (118)
78 cd03202 GST_C_etherase_LigE GS 99.0 8.3E-10 1.8E-14 82.5 7.1 68 175-247 56-123 (124)
79 cd03188 GST_C_Beta GST_C famil 99.0 1.3E-09 2.8E-14 79.7 8.0 66 176-248 42-107 (114)
80 cd03186 GST_C_SspA GST_N famil 99.0 9E-10 1.9E-14 79.9 6.9 68 175-248 33-100 (107)
81 cd03196 GST_C_5 GST_C family, 99.0 7.9E-10 1.7E-14 81.5 6.5 71 174-248 38-108 (115)
82 cd03204 GST_C_GDAP1 GST_C fami 99.0 1.5E-09 3.2E-14 79.2 7.2 71 175-248 27-108 (111)
83 cd03177 GST_C_Delta_Epsilon GS 99.0 1.8E-09 3.9E-14 79.8 7.8 69 174-249 35-104 (118)
84 cd03209 GST_C_Mu GST_C family, 99.0 1.6E-09 3.5E-14 80.5 7.2 67 176-248 34-100 (121)
85 cd03207 GST_C_8 GST_C family, 99.0 1.9E-09 4.2E-14 77.6 6.8 66 175-248 28-93 (103)
86 cd03182 GST_C_GTT2_like GST_C 99.0 2.2E-09 4.7E-14 79.1 6.9 68 175-248 47-114 (117)
87 cd03201 GST_C_DHAR GST_C famil 98.9 4.1E-09 8.9E-14 78.4 7.7 70 176-248 29-101 (121)
88 cd03190 GST_C_ECM4_like GST_C 98.9 2.6E-09 5.7E-14 81.7 6.7 74 175-248 35-109 (142)
89 cd03198 GST_C_CLIC GST_C famil 98.9 3.7E-09 8E-14 79.6 7.2 73 175-248 27-115 (134)
90 cd03210 GST_C_Pi GST_C family, 98.9 5.5E-09 1.2E-13 78.2 7.7 67 176-248 34-103 (126)
91 cd03178 GST_C_Ure2p_like GST_C 98.9 3.2E-09 7E-14 77.6 6.0 68 175-248 38-105 (113)
92 cd00299 GST_C_family Glutathio 98.9 4.5E-09 9.8E-14 74.6 6.6 67 175-245 34-100 (100)
93 cd03179 GST_C_1 GST_C family, 98.9 6.6E-09 1.4E-13 74.8 7.3 64 176-246 42-105 (105)
94 cd03183 GST_C_Theta GST_C fami 98.9 8.3E-09 1.8E-13 77.0 7.7 67 176-248 44-111 (126)
95 TIGR02190 GlrX-dom Glutaredoxi 98.9 7.4E-09 1.6E-13 71.0 6.8 67 46-120 7-79 (79)
96 cd03181 GST_C_EFB1gamma GST_C 98.9 7.7E-09 1.7E-13 76.8 7.4 70 175-248 38-107 (123)
97 cd03191 GST_C_Zeta GST_C famil 98.9 7.3E-09 1.6E-13 76.8 7.2 63 179-248 46-110 (121)
98 cd03184 GST_C_Omega GST_C fami 98.9 6.4E-09 1.4E-13 77.6 6.6 74 174-248 29-104 (124)
99 cd03208 GST_C_Alpha GST_C fami 98.8 9.6E-09 2.1E-13 78.1 7.3 62 181-248 43-106 (137)
100 cd03200 GST_C_JTV1 GST_C famil 98.8 9.1E-09 2E-13 73.3 6.7 58 180-247 38-95 (96)
101 cd03185 GST_C_Tau GST_C family 98.8 1.6E-08 3.5E-13 75.4 8.1 73 175-248 33-106 (126)
102 cd03192 GST_C_Sigma_like GST_C 98.8 1.7E-08 3.6E-13 72.7 5.9 64 177-245 39-104 (104)
103 cd03029 GRX_hybridPRX5 Glutare 98.7 9.1E-08 2E-12 64.3 7.1 65 48-120 2-72 (72)
104 PRK10638 glutaredoxin 3; Provi 98.7 7E-08 1.5E-12 66.8 6.1 67 47-121 2-75 (83)
105 cd03203 GST_C_Lambda GST_C fam 98.6 6.5E-08 1.4E-12 71.8 5.9 64 181-248 34-102 (120)
106 cd03197 GST_C_mPGES2 GST_C fam 98.6 1.2E-07 2.7E-12 72.1 6.9 66 175-248 81-146 (149)
107 cd03195 GST_C_4 GST_C family, 98.6 1.5E-07 3.1E-12 69.2 6.9 65 174-248 39-104 (114)
108 cd03194 GST_C_3 GST_C family, 98.6 2.7E-07 5.9E-12 67.8 7.6 63 176-248 40-105 (114)
109 cd03205 GST_C_6 GST_C family, 98.5 2.8E-07 6.1E-12 65.7 6.6 64 175-245 35-98 (98)
110 PRK10329 glutaredoxin-like pro 98.4 8.9E-07 1.9E-11 60.9 5.8 55 48-110 2-62 (81)
111 cd03027 GRX_DEP Glutaredoxin ( 98.4 9E-07 1.9E-11 59.5 5.4 61 48-116 2-69 (73)
112 TIGR02196 GlrX_YruB Glutaredox 98.3 2.9E-06 6.3E-11 56.5 6.4 63 49-119 2-73 (74)
113 cd02066 GRX_family Glutaredoxi 98.3 2.6E-06 5.7E-11 56.3 5.7 62 49-118 2-70 (72)
114 cd02976 NrdH NrdH-redoxin (Nrd 98.2 4E-06 8.7E-11 55.7 5.3 55 49-111 2-63 (73)
115 COG0695 GrxC Glutaredoxin and 98.1 1.9E-05 4.2E-10 54.1 7.6 63 48-118 2-73 (80)
116 cd03418 GRX_GRXb_1_3_like Glut 98.1 1.2E-05 2.6E-10 54.1 6.6 64 49-120 2-73 (75)
117 TIGR02181 GRX_bact Glutaredoxi 98.0 1.7E-05 3.7E-10 54.0 5.9 65 49-121 1-72 (79)
118 TIGR02189 GlrX-like_plant Glut 98.0 5.3E-05 1.1E-09 54.1 8.0 65 47-119 8-82 (99)
119 TIGR02200 GlrX_actino Glutared 97.9 3.5E-05 7.5E-10 51.9 6.1 64 49-120 2-76 (77)
120 TIGR02194 GlrX_NrdH Glutaredox 97.9 2.5E-05 5.5E-10 52.3 5.1 51 49-107 1-57 (72)
121 PRK11200 grxA glutaredoxin 1; 97.9 8E-05 1.7E-09 51.5 7.6 68 48-123 2-83 (85)
122 PHA03050 glutaredoxin; Provisi 97.8 0.00012 2.6E-09 53.2 7.9 63 47-117 13-88 (108)
123 TIGR02183 GRXA Glutaredoxin, G 97.8 0.00012 2.5E-09 50.9 7.1 67 49-123 2-82 (86)
124 PF00462 Glutaredoxin: Glutare 97.7 2.8E-05 6.1E-10 50.0 2.9 53 49-109 1-60 (60)
125 cd03419 GRX_GRXh_1_2_like Glut 97.7 0.00021 4.6E-09 48.7 7.5 66 49-122 2-77 (82)
126 TIGR02180 GRX_euk Glutaredoxin 97.5 0.0007 1.5E-08 46.2 7.6 59 63-121 7-77 (84)
127 cd03028 GRX_PICOT_like Glutare 97.4 0.00081 1.8E-08 47.0 6.7 57 63-119 21-84 (90)
128 TIGR00365 monothiol glutaredox 97.4 0.00067 1.4E-08 48.2 6.1 70 47-119 12-88 (97)
129 PRK12759 bifunctional gluaredo 96.9 0.0033 7.1E-08 56.5 7.7 63 47-117 2-79 (410)
130 PF14834 GST_C_4: Glutathione 96.8 0.0099 2.1E-07 43.0 7.7 68 175-243 41-113 (117)
131 PF04399 Glutaredoxin2_C: Glut 96.5 0.015 3.3E-07 43.6 7.6 65 175-248 57-121 (132)
132 cd03031 GRX_GRX_like Glutaredo 96.5 0.018 3.9E-07 44.1 8.1 68 49-118 2-80 (147)
133 KOG1752|consensus 96.5 0.023 5.1E-07 40.7 7.9 65 47-119 14-88 (104)
134 PRK10824 glutaredoxin-4; Provi 96.4 0.013 2.7E-07 43.0 6.1 59 63-121 28-93 (115)
135 cd03036 ArsC_like Arsenate Red 96.1 0.0082 1.8E-07 43.7 3.8 32 49-88 1-32 (111)
136 cd02977 ArsC_family Arsenate R 96.0 0.0095 2.1E-07 42.8 3.9 32 49-88 1-32 (105)
137 PRK01655 spxA transcriptional 95.4 0.022 4.7E-07 42.8 3.8 32 49-88 2-33 (131)
138 cd03033 ArsC_15kD Arsenate Red 95.3 0.024 5.1E-07 41.5 3.8 33 48-88 1-33 (113)
139 PTZ00062 glutaredoxin; Provisi 95.3 0.056 1.2E-06 43.8 6.2 56 63-118 126-188 (204)
140 cd03199 GST_C_GRX2 GST_C famil 95.3 0.093 2E-06 39.1 6.8 64 176-248 59-122 (128)
141 cd03032 ArsC_Spx Arsenate Redu 95.2 0.029 6.3E-07 41.1 4.0 32 49-88 2-33 (115)
142 TIGR01617 arsC_related transcr 95.1 0.032 6.9E-07 41.0 4.0 32 49-88 1-32 (117)
143 cd02973 TRX_GRX_like Thioredox 95.0 0.064 1.4E-06 34.7 5.0 55 48-110 2-64 (67)
144 cd03035 ArsC_Yffb Arsenate Red 94.5 0.058 1.3E-06 38.8 3.9 32 49-88 1-32 (105)
145 PRK12559 transcriptional regul 94.4 0.061 1.3E-06 40.4 4.0 32 49-88 2-33 (131)
146 PRK13344 spxA transcriptional 94.1 0.077 1.7E-06 39.9 4.1 32 49-88 2-33 (132)
147 TIGR01616 nitro_assoc nitrogen 92.0 0.22 4.9E-06 37.0 3.7 33 48-88 2-34 (126)
148 PRK10026 arsenate reductase; P 91.9 0.24 5.3E-06 37.6 3.8 34 47-88 2-35 (141)
149 cd03034 ArsC_ArsC Arsenate Red 91.7 0.27 5.9E-06 35.7 3.9 32 49-88 1-32 (112)
150 PRK10853 putative reductase; P 91.5 0.27 5.8E-06 36.2 3.7 32 49-88 2-33 (118)
151 COG1393 ArsC Arsenate reductas 91.5 0.28 6E-06 36.0 3.7 33 48-88 2-34 (117)
152 TIGR00014 arsC arsenate reduct 91.4 0.31 6.6E-06 35.6 3.9 32 49-88 1-32 (114)
153 PF13192 Thioredoxin_3: Thiore 90.0 0.27 5.8E-06 32.9 2.3 49 63-111 8-62 (76)
154 cd03030 GRX_SH3BGR Glutaredoxi 89.6 2.1 4.6E-05 29.9 6.7 51 67-117 18-79 (92)
155 TIGR00412 redox_disulf_2 small 88.5 0.73 1.6E-05 30.8 3.6 48 63-110 8-61 (76)
156 COG4545 Glutaredoxin-related p 88.5 1.7 3.8E-05 28.9 5.1 32 49-88 4-35 (85)
157 PF11287 DUF3088: Protein of u 86.4 1.7 3.8E-05 31.3 4.6 61 63-123 22-107 (112)
158 cd01659 TRX_superfamily Thiore 86.1 1.9 4E-05 26.0 4.4 43 63-105 7-60 (69)
159 KOG1147|consensus 83.4 1 2.2E-05 41.4 2.8 57 180-243 91-150 (712)
160 PF03960 ArsC: ArsC family; I 81.3 1.9 4.1E-05 31.0 3.2 26 63-88 4-29 (110)
161 PF09635 MetRS-N: MetRS-N bind 78.7 1.9 4E-05 31.7 2.4 48 69-123 13-62 (122)
162 cd03026 AhpF_NTD_C TRX-GRX-lik 78.0 4.9 0.00011 27.7 4.3 55 48-110 15-77 (89)
163 TIGR00411 redox_disulf_1 small 72.5 15 0.00032 24.1 5.5 51 49-107 3-62 (82)
164 COG0278 Glutaredoxin-related p 69.6 26 0.00055 24.9 6.1 72 47-121 15-94 (105)
165 COG5515 Uncharacterized conser 63.2 6.3 0.00014 25.1 1.9 26 48-77 2-27 (70)
166 PHA03075 glutaredoxin-like pro 54.9 34 0.00073 25.0 4.7 66 48-123 4-70 (123)
167 PF05768 DUF836: Glutaredoxin- 54.2 36 0.00078 22.7 4.7 50 49-106 2-57 (81)
168 PHA02125 thioredoxin-like prot 50.4 42 0.00091 21.9 4.5 41 63-105 8-53 (75)
169 TIGR03143 AhpF_homolog putativ 46.9 26 0.00057 32.9 4.1 55 48-110 479-541 (555)
170 PF04908 SH3BGR: SH3-binding, 46.3 27 0.00058 24.8 3.1 49 67-115 19-83 (99)
171 PF10806 DUF2731: Protein of u 43.6 45 0.00097 24.8 4.0 46 58-103 67-124 (125)
172 KOG1668|consensus 42.3 19 0.00041 29.6 2.0 54 183-247 10-63 (231)
173 cd04911 ACT_AKiii-YclM-BS_1 AC 39.1 39 0.00084 22.7 2.8 23 66-88 16-38 (76)
174 TIGR01764 excise DNA binding d 34.1 60 0.0013 18.6 3.0 25 96-120 24-48 (49)
175 PF12728 HTH_17: Helix-turn-he 25.2 1.1E+02 0.0024 18.1 3.0 27 96-122 24-50 (51)
176 COG3019 Predicted metal-bindin 23.2 1.4E+02 0.003 22.7 3.7 69 47-123 26-104 (149)
177 KOG0911|consensus 21.0 2.4E+02 0.0051 23.3 4.9 59 63-121 152-217 (227)
178 TIGR02681 phage_pRha phage reg 20.8 99 0.0022 22.2 2.5 25 99-123 2-27 (108)
No 1
>KOG3027|consensus
Probab=100.00 E-value=3.5e-34 Score=221.81 Aligned_cols=212 Identities=52% Similarity=0.986 Sum_probs=198.3
Q ss_pred CCCCCCCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 41 AREIWPDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 41 ~~~~~~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
..++||+|++||+|+.+...+++....|+.|+++|+..++||.++...+.+++||.|+||.|..|.+.+.|-.+|..+..
T Consensus 10 aae~WPedatL~qp~e~eQiLl~d~ascLAVqtfLrMcnLPf~v~~~~NaefmSP~G~vPllr~g~~~~aef~pIV~fVe 89 (257)
T KOG3027|consen 10 AAEPWPEDATLYQPYEAEQILLPDNASCLAVQTFLRMCNLPFNVRQRANAEFMSPGGKVPLLRIGKTLFAEFEPIVDFVE 89 (257)
T ss_pred ccCCCCccchhcCcccccccccccchhHHHHHHHHHHcCCCceeeecCCccccCCCCCCceeeecchhhhhhhHHHHHHH
Confidence 36889999999999999999999999999999999999999999988888899999999999999999999999999998
Q ss_pred hcC-------------------------------eeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcC
Q psy10805 121 NKN-------------------------------YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLK 169 (253)
Q Consensus 121 ~~~-------------------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (253)
.+. +-.|.++.+|.+++..+++..+|||++.++++..++.+.+.++..+
T Consensus 90 ak~~~l~s~lsE~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~ 169 (257)
T KOG3027|consen 90 AKGVTLTSWLSEDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYD 169 (257)
T ss_pred HhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcC
Confidence 875 6678888888888888899999999999999988888888888888
Q ss_pred cCCCCHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhcc
Q psy10805 170 WLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQTY 249 (253)
Q Consensus 170 ~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r~ 249 (253)
++..+.+++.+++.++.++|+.+|+.++||.|++||-+|+.+||++..++...+|+..+...++.|+||.++++||.+.|
T Consensus 170 W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~y 249 (257)
T KOG3027|consen 170 WDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQY 249 (257)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999888888888889999999999999999999
Q ss_pred CCC
Q psy10805 250 FKK 252 (253)
Q Consensus 250 ~~~ 252 (253)
|.+
T Consensus 250 F~~ 252 (257)
T KOG3027|consen 250 FKQ 252 (257)
T ss_pred HHh
Confidence 864
No 2
>KOG4244|consensus
Probab=99.97 E-value=1.1e-30 Score=210.49 Aligned_cols=205 Identities=20% Similarity=0.296 Sum_probs=157.1
Q ss_pred CCCCCCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 42 REIWPDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 42 ~~~~~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
...|++|++...+++|....|+.||||+||+++||..+||||.+.... ...|+.|++|+++.+|..+.+|..|..+|.+
T Consensus 38 k~d~kkD~VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~-~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~ 116 (281)
T KOG4244|consen 38 KTDYKKDTVYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL-KRRSRNGTLPFIELNGEHIADSDLIEDRLRK 116 (281)
T ss_pred hhccccCeEEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccc-eeeccCCCcceEEeCCeeccccHHHHHHHHH
Confidence 346888987767778999999999999999999999999999988763 2579999999999999999999999999998
Q ss_pred cC------------------------------eeeeccCcchHHHhhhhhcCCCC-chhHHHhhHH----HHHHHHHHhh
Q psy10805 122 KN------------------------------YITWCDPTTYREVTKVRHGAVAP-WPLNIYLTYK----KKLTVQHRLK 166 (253)
Q Consensus 122 ~~------------------------------~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~ 166 (253)
++ +.+|.++..+.. .+... ..+ .+...++++. +.+.+.+++.
T Consensus 117 hf~~~~~L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~-~~~~~--~l~~~l~~~l~~~~~~~~f~~kv~~r~~ 193 (281)
T KOG4244|consen 117 HFKIPDDLSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNT-DRKLI--GLPGFLFPLLLPLFWKAIFGKKVYKRST 193 (281)
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH-HHhcc--CccccchHHHHHHHHHHHHHHHHHHHhh
Confidence 76 111111111110 01110 111 1111222222 2233444454
Q ss_pred hcCcCCCCHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHH-hcChhHHHHHHHH
Q psy10805 167 TLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTI-RAYPNLVEHCTRI 245 (253)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l-~~~p~L~~~~~ri 245 (253)
++ +|....+++.+.+++.|+.++..|++++||+||++|-+|+.+|++|+.+.+ |+ .....+.+ .++|||.+|++||
T Consensus 194 g~-IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~-~~~i~d~le~d~p~l~eYceRI 270 (281)
T KOG4244|consen 194 GA-IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PF-RSHISDLLEGDFPNLLEYCERI 270 (281)
T ss_pred cc-ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cC-CCcHHHHHhhhchHHHHHHHHH
Confidence 44 777888889999999999999999999999999999999999999999888 54 34567777 5899999999999
Q ss_pred HhccCCCC
Q psy10805 246 EQTYFKKD 253 (253)
Q Consensus 246 ~~r~~~~~ 253 (253)
++++||+|
T Consensus 271 r~~~yP~d 278 (281)
T KOG4244|consen 271 RKEIYPND 278 (281)
T ss_pred HHHhCCCc
Confidence 99999987
No 3
>PLN02473 glutathione S-transferase
Probab=99.94 E-value=1.5e-26 Score=189.32 Aligned_cols=187 Identities=16% Similarity=0.089 Sum_probs=120.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC--C-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA--E-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~--~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||.. +.||+|+||+++|+++||+||.+.++.. + .+||.|+||+|++||.+|+||.||++||
T Consensus 3 ~kLy~~--------~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL 74 (214)
T PLN02473 3 VKVYGQ--------IKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYY 74 (214)
T ss_pred eEEecC--------CCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHH
Confidence 578987 8899999999999999999999987631 1 2599999999999999999999999999
Q ss_pred hhcCee---eeccCcchHH-HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCC
Q psy10805 120 QNKNYI---TWCDPTTYRE-VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEK 195 (253)
Q Consensus 120 ~~~~~~---~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~ 195 (253)
++++.. .+........ ..+.+.. .....+..........................+.....+.+.++.||++|++
T Consensus 75 ~~~~~~~~~~l~p~~~~~ra~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 153 (214)
T PLN02473 75 ATKYADQGTDLLGKTLEHRAIVDQWVE-VENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLAT 153 (214)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHHH-HHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhcc
Confidence 998611 1211111111 1111110 0000000000000000000000000000111234456778899999999998
Q ss_pred CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 196 NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 196 ~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
++|++||++|+||+++++.+..+... . .....++++|+|.+|++||.+|
T Consensus 154 ~~~l~Gd~~t~ADi~~~~~~~~~~~~-~---~~~~~~~~~P~l~~w~~~~~~~ 202 (214)
T PLN02473 154 NRYLGGDEFTLADLTHMPGMRYIMNE-T---SLSGLVTSRENLNRWWNEISAR 202 (214)
T ss_pred CCcccCCCCCHHHHHHHHHHHHHHhc-c---ccHHHHhcCHHHHHHHHHHhcC
Confidence 89999999999999998887654321 1 1123468999999999999876
No 4
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.94 E-value=7.6e-26 Score=184.87 Aligned_cols=176 Identities=11% Similarity=0.107 Sum_probs=121.3
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
-++||+. +.||+|++|+++|+++|++||.+.++.. ...||.|+||+|++||.+|+||.||++||++
T Consensus 10 ~~~Ly~~--------~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~ 81 (211)
T PRK09481 10 VMTLFSG--------PTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDE 81 (211)
T ss_pred eeEEeCC--------CCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHH
Confidence 4789998 8899999999999999999999999731 2369999999999999999999999999999
Q ss_pred cCeeeeccCcc-hHH-HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCCCCcc
Q psy10805 122 KNYITWCDPTT-YRE-VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFF 199 (253)
Q Consensus 122 ~~~~~w~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl 199 (253)
+|....+-+.. ... ..+.|.. +.... +. .....+. .+ .....++..+.+.+.+..||++|++++||
T Consensus 82 ~~~~~~l~p~~~~~ra~~~~~~~----~~~~~-----~~-~~~~~~~-~~-~~~~~~~~~~~l~~~l~~le~~L~~~~~l 149 (211)
T PRK09481 82 RFPHPPLMPVYPVARGESRLMMH----RIEKD-----WY-SLMNKIV-NG-SASEADAARKQLREELLAIAPVFGEKPYF 149 (211)
T ss_pred hCCCCCCCCCCHHHHHHHHHHHH----HHHHH-----HH-HHHHHHh-cC-CHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 97111111111 110 0111110 00000 00 0001111 01 11223455667888999999999999999
Q ss_pred cCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 200 FKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 200 ~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+|+++|+||+++++.+..+.....+ + ....+|+|.+|++||.+|
T Consensus 150 ~G~~~t~AD~~l~~~~~~~~~~~~~---~--~~~~~p~l~~w~~~~~~r 193 (211)
T PRK09481 150 MSEEFSLVDCYLAPLLWRLPVLGIE---L--SGPGAKELKGYMTRVFER 193 (211)
T ss_pred cCCCccHHHHHHHHHHHHHHhcCCC---C--CCCCChhHHHHHHHHhcc
Confidence 9999999999999988665433221 1 014789999999999876
No 5
>PRK10387 glutaredoxin 2; Provisional
Probab=99.93 E-value=8.5e-26 Score=184.25 Aligned_cols=182 Identities=13% Similarity=0.078 Sum_probs=117.8
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC-----CCCCCCCCcceE-EeCCEEecChhhHHHHHhhc
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA-----EYMSPSNRVPFI-KVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~-----~~~~P~gkvP~L-~~~g~~l~eS~aI~~YL~~~ 122 (253)
++||+. ..||+|+||+++|+++||||+.+.++.. ...||.|+||+| .+||.+|+||.+|++||+++
T Consensus 1 ~~Ly~~--------~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~~~~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~ 72 (210)
T PRK10387 1 MKLYIY--------DHCPFCVKARMIFGLKNIPVELIVLANDDEATPIRMIGQKQVPILQKDDGSYMPESLDIVHYIDEL 72 (210)
T ss_pred CEEEeC--------CCCchHHHHHHHHHHcCCCeEEEEcCCCchhhHHHhcCCcccceEEecCCeEecCHHHHHHHHHHh
Confidence 478888 8999999999999999999999988632 235789999999 57899999999999999999
Q ss_pred CeeeeccCcchHHHhhhhhcC-------C-CCchhHH----HhhHHHHHHHHHHhhhcCcCC-----CCHHHHHHHHHHH
Q psy10805 123 NYITWCDPTTYREVTKVRHGA-------V-APWPLNI----YLTYKKKLTVQHRLKTLKWLE-----KSLDQVYKDVDKC 185 (253)
Q Consensus 123 ~~~~w~~~~~~~~~~~~~~~~-------~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 185 (253)
|....+....... .+.|... . .+..... ....... ...........+. ...++..+.+++.
T Consensus 73 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (210)
T PRK10387 73 DGKPLLTGKRSPA-IEEWLRKVFGYLNKLLYPRFAKADLPEFATPSAR-QYFIDKKEASIGDFDALLAHTPGLIKEINAD 150 (210)
T ss_pred CCCccCCCcccHH-HHHHHHHHHHHhhcchhcccccCCCcccCCHHHH-HHHHHhHHhccCCHHHHHhcCHHHHHHHHHH
Confidence 7211111111111 1122100 0 0000000 0000000 0000000001111 0114567788999
Q ss_pred HHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhcc
Q psy10805 186 CQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQTY 249 (253)
Q Consensus 186 l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r~ 249 (253)
|+.||.+|++ +||+||++|+||+++++++..+...+. +..+|+|.+|++||.+|.
T Consensus 151 l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~--------~~~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 151 LRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG--------IEWPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC--------CCCCHHHHHHHHHHHHHh
Confidence 9999999986 999999999999999998876543211 234699999999999874
No 6
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.1e-25 Score=180.48 Aligned_cols=183 Identities=15% Similarity=0.130 Sum_probs=119.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC--------CCCCCCCcceEEeCCE-EecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE--------YMSPSNRVPFIKVGQF-LVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~--------~~~P~gkvP~L~~~g~-~l~eS~aI~~YL 119 (253)
++||+. +.||+|.||+++|.++|+||+.+.++... ..||.|+||+|+++|. +|+||.||++||
T Consensus 1 ~~L~~~--------~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL 72 (211)
T COG0625 1 MKLYGS--------PTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYL 72 (211)
T ss_pred CeeecC--------CCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHH
Confidence 357777 77899999999999999999999998431 3699999999998776 899999999999
Q ss_pred hhcCee--eeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCc-CCCCHHHHHHHHHHHHHHHHhhhCCC
Q psy10805 120 QNKNYI--TWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKW-LEKSLDQVYKDVDKCCQSLSERLEKN 196 (253)
Q Consensus 120 ~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~Le~~L~~~ 196 (253)
+++|.. .+.... .....+..+.....+....+.+. .............. .....+...+.+.+.++.+|..|+++
T Consensus 73 ~~~~~~~~l~p~~~-~~r~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~ 150 (211)
T COG0625 73 AERYPGPPLLPADP-LARRARALLLWWLFFAASDLHPV-IGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADG 150 (211)
T ss_pred HhhCCCCCcCCCCc-hhHHHHHHHHHHHHHHHhcccHH-HHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999722 222121 10011111100000000000010 10000001000000 01123455677889999999999999
Q ss_pred CcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 197 NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 197 ~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+|++|+++|+||+++++.+..+..... .++.+|+|.+|++||.+|
T Consensus 151 ~~l~G~~~tiAD~~~~~~~~~~~~~~~-------~~~~~p~l~~w~~r~~~r 195 (211)
T COG0625 151 PYLAGDRFTIADIALAPLLWRLALLGE-------ELADYPALKAWYERVLAR 195 (211)
T ss_pred CcccCCCCCHHHHHHHHHHHHhhhcCc-------ccccChHHHHHHHHHHcC
Confidence 999999999999999888776433211 126799999999999866
No 7
>KOG3028|consensus
Probab=99.93 E-value=3.1e-24 Score=177.38 Aligned_cols=196 Identities=36% Similarity=0.508 Sum_probs=170.8
Q ss_pred ccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeC-CEEecChhhHHHHHhh--c-C---------
Q psy10805 57 VEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVG-QFLVAELDPIVKFTQN--K-N--------- 123 (253)
Q Consensus 57 ~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~-g~~l~eS~aI~~YL~~--~-~--------- 123 (253)
+..++|+.++-|..+.++++.++.|.+++..++ ++.+|.|++|+|+.+ |..+..-..|..||.. + |
T Consensus 9 ~~~glptid~~sL~~l~y~kl~~~~l~v~~ssN-~~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~k 87 (313)
T KOG3028|consen 9 GGYGLPTIDPDSLAALIYLKLAGAPLKVVVSSN-PWRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAK 87 (313)
T ss_pred CCCCCCCcChhHHHHHHHHHHhCCCceeEeecC-CCCCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHH
Confidence 346778999999999999999998888888776 799999999999975 5899999999999988 3 3
Q ss_pred ---------------------eeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhh-cCcCCCCHHHHHHH
Q psy10805 124 ---------------------YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKT-LKWLEKSLDQVYKD 181 (253)
Q Consensus 124 ---------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 181 (253)
+..|++.+||.+++++||...++||++.+.+..+++++.+++.- .|......++++..
T Consensus 88 q~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~ 167 (313)
T KOG3028|consen 88 QLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKD 167 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHH
Confidence 78899999999999999999999999999888888777765431 22222346778899
Q ss_pred HHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhccCCCC
Q psy10805 182 VDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQTYFKKD 253 (253)
Q Consensus 182 ~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r~~~~~ 253 (253)
+.+++..|+++||+++||+||+||..|+.+|+++..+...++|...+...+..++||.+|++++++.||+.+
T Consensus 168 Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~~f~~~ 239 (313)
T KOG3028|consen 168 ASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSLYFRAS 239 (313)
T ss_pred HHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999888888888888888889999999999999999764
No 8
>KOG0406|consensus
Probab=99.92 E-value=1.8e-24 Score=174.39 Aligned_cols=184 Identities=15% Similarity=0.067 Sum_probs=124.1
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCC-CCCCcceEEeCCEEecChhhHHHHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMS-PSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~-P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
..++||.. .+|||++|++++|++|||+||+++.+.. ..+| +.+|||||+|+|+.|+||..|++||
T Consensus 8 ~~vrL~~~--------w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYi 79 (231)
T KOG0406|consen 8 GTVKLLGM--------WFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYI 79 (231)
T ss_pred CeEEEEEe--------ecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHH
Confidence 45899998 9999999999999999999999999842 1357 7899999999999999999999999
Q ss_pred hhcCe-eeeccC-cchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhC-CC
Q psy10805 120 QNKNY-ITWCDP-TTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLE-KN 196 (253)
Q Consensus 120 ~~~~~-~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~-~~ 196 (253)
++.+. ..-+-+ ..|.+......++. +..... .+....... .+....+...+++.+.|..||+.|+ ++
T Consensus 80 De~w~~~~~iLP~DPy~Ra~arfwa~~--------id~~~~-~~~~~~~~~-~~~e~~~~~~~e~~e~l~~lE~el~k~k 149 (231)
T KOG0406|consen 80 DETWPSGPPILPSDPYERAQARFWAEY--------IDKKVF-FVGRFVVAA-KGGEEQEAAKEELREALKVLEEELGKGK 149 (231)
T ss_pred HhhccCCCCCCCCCHHHHHHHHHHHHH--------HHhHHH-HHHHHHHhh-cCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99861 111111 12333211111110 110000 000111111 1223456677889999999999998 88
Q ss_pred CcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHH-HhcChhHHHHHHHHHhc
Q psy10805 197 NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAST-IRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 197 ~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~-l~~~p~L~~~~~ri~~r 248 (253)
+||+|++++++|+++++.+................ -..+|.|.+|.+||.++
T Consensus 150 ~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 150 DFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred CCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcC
Confidence 99999999999999986665544321100000011 25899999999999864
No 9
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.92 E-value=6.2e-25 Score=179.95 Aligned_cols=178 Identities=16% Similarity=0.200 Sum_probs=114.0
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--C-------CCCCCCCCcceEEe-----CC--EEecCh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--A-------EYMSPSNRVPFIKV-----GQ--FLVAEL 112 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~-------~~~~P~gkvP~L~~-----~g--~~l~eS 112 (253)
++||+. + +|+|+||+++|+++|||||.+.++. . ...||.|+||+|++ || .+|+||
T Consensus 2 ~~Ly~~--------~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES 72 (215)
T PRK13972 2 IDLYFA--------P-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFES 72 (215)
T ss_pred eEEEEC--------C-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcH
Confidence 467755 4 7999999999999999999998862 1 23699999999997 45 479999
Q ss_pred hhHHHHHhhcCeeeeccCcchHH-HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHh
Q psy10805 113 DPIVKFTQNKNYITWCDPTTYRE-VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSE 191 (253)
Q Consensus 113 ~aI~~YL~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~ 191 (253)
.||++||++++ ..+........ ..+.|.. +....+.+............ ........+.....+.+.+..||.
T Consensus 73 ~AI~~YL~~~~-~~l~p~~~~~ra~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~le~ 146 (215)
T PRK13972 73 GAILLYLAEKT-GLFLSHETRERAATLQWLF----WQVGGLGPMLGQNHHFNHAA-PQTIPYAIERYQVETQRLYHVLNK 146 (215)
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHH----HHhhccCcceeeeeeeeccC-CCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999986 33322111111 1122210 00000000000000000000 000011123445567889999999
Q ss_pred hhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 192 RLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 192 ~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+|++++||+|+++|+||+++++.+........ .++.||+|.+|++||.+|
T Consensus 147 ~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~-------~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 147 RLENSPWLGGENYSIADIACWPWVNAWTRQRI-------DLAMYPAVKNWHERIRSR 196 (215)
T ss_pred HhccCccccCCCCCHHHHHHHHHHHHHhhcCC-------cchhCHHHHHHHHHHHhC
Confidence 99989999999999999998887644332211 146899999999999886
No 10
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.92 E-value=4.7e-24 Score=175.66 Aligned_cols=171 Identities=13% Similarity=0.110 Sum_probs=114.7
Q ss_pred cCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCCCCcceEEeCCEEecChhhHHHHHhhcCe-eeeccCcc
Q psy10805 60 ILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKNY-ITWCDPTT 132 (253)
Q Consensus 60 ~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~-~~w~~~~~ 132 (253)
.....||+|+||+++|.++||+|+.+.++.. ...||.|+||+|+++|.+|+||.+|++||+++|. ..+. ..
T Consensus 14 ~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p--~l 91 (236)
T TIGR00862 14 ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYP--KL 91 (236)
T ss_pred CcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCC--CC
Confidence 3448899999999999999999999999731 2369999999999999999999999999999861 1111 00
Q ss_pred hHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhC------------------
Q psy10805 133 YREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLE------------------ 194 (253)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~------------------ 194 (253)
.+ ..+. ....... +.......+.. . .....++..+++.+.+..||..|+
T Consensus 92 ~p---~~~~-------~~~~~~~-l~~~~~~~~~~-~-~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~ 158 (236)
T TIGR00862 92 SP---KHPE-------SNTAGLD-IFAKFSAYIKN-S-NPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVS 158 (236)
T ss_pred CC---CCHH-------HHHHHHH-HHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 00 0000 0000000 00011111111 0 111233445568889999998886
Q ss_pred CCCcccCCCCChhhHHHHHHHHHHhcCC--CCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 195 KNNFFFKDKPTELDALLFGHIYAVLTTP--LPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 195 ~~~fl~Gd~~t~aD~~~~~~l~~~~~~~--~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+++||.|+++|+|||++++.+..+.... ..+ -++.+++|+|.+|++|+.+|
T Consensus 159 ~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~---~~i~~~~p~l~~w~~~~~~~ 211 (236)
T TIGR00862 159 RRKFLDGDELTLADCNLLPKLHIVKVVAKKYRN---FDIPAEFTGVWRYLSNAYAR 211 (236)
T ss_pred CCCcccCCccchhhHHHHHHHHHHHHHHHHHhC---cCccccCchHHHHHHHHhcc
Confidence 5799999999999999999987665310 000 01257899999999999876
No 11
>PLN02378 glutathione S-transferase DHAR1
Probab=99.92 E-value=5.1e-24 Score=174.32 Aligned_cols=163 Identities=18% Similarity=0.173 Sum_probs=111.6
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCC------CCCCCCCCCcceEEeCCEEecChhhHHHHHhhcCeeeeccCcchHHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKN------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKNYITWCDPTTYREV 136 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~~~w~~~~~~~~~ 136 (253)
..||+|+||+++|+++|++|+.+.++. +...||.|+||+|++||.+|+||.+|++||+++|....+.+ ..+
T Consensus 18 ~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~~--~~~- 94 (213)
T PLN02378 18 GDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLKT--PAE- 94 (213)
T ss_pred CCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCCC--HHH-
Confidence 569999999999999999999999873 22469999999999999999999999999999861111111 010
Q ss_pred hhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHHH
Q psy10805 137 TKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGH 214 (253)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~--~~~fl~Gd~~t~aD~~~~~~ 214 (253)
+..+. ..+.. ........ ....+.....+.+.|+.||++|+ +++|++||++|+||++++++
T Consensus 95 -~a~i~-------~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~ 157 (213)
T PLN02378 95 -FASVG-------SNIFG-----TFGTFLKS----KDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPK 157 (213)
T ss_pred -HHHHH-------HHHHH-----HHHHHHhc----CChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHH
Confidence 11110 00000 00011110 11123344567788999999997 47999999999999999998
Q ss_pred HHHHhcC-C-CCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 215 IYAVLTT-P-LPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 215 l~~~~~~-~-~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+..+... . ... .+..+.+|+|.+|++||.+|
T Consensus 158 ~~~l~~~~~~~~~---~~~~~~~p~l~~w~~~~~~r 190 (213)
T PLN02378 158 LYHLQVALGHFKS---WSVPESFPHVHNYMKTLFSL 190 (213)
T ss_pred HHHHHHHHHHhcC---CCchhHhHHHHHHHHHHhcC
Confidence 7654321 0 000 01246899999999999886
No 12
>PLN02395 glutathione S-transferase
Probab=99.92 E-value=3.7e-24 Score=175.27 Aligned_cols=182 Identities=16% Similarity=0.107 Sum_probs=116.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||+. .. ++++|++++|.++|++|+.+.++.. ...||.|+||+|+++|.+|+||.+|++||
T Consensus 3 ~~ly~~--------~~-~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL 73 (215)
T PLN02395 3 LKVYGP--------AF-ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYY 73 (215)
T ss_pred EEEEcC--------Cc-CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHH
Confidence 577865 33 4689999999999999999887621 13699999999999999999999999999
Q ss_pred hhcCee---eeccCcchH-HHhhhhhc---CCC-CchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHh
Q psy10805 120 QNKNYI---TWCDPTTYR-EVTKVRHG---AVA-PWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSE 191 (253)
Q Consensus 120 ~~~~~~---~w~~~~~~~-~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~ 191 (253)
++++.. .+....... ...+.|.. ..+ +..... ..........+........+...+.+.+.++.||+
T Consensus 74 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~ 148 (215)
T PLN02395 74 AEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLNL-----TLHILFASKMGFPADEKVIKESEEKLAKVLDVYEA 148 (215)
T ss_pred HHHcCCCCcCcCCCChhHHHHHHHHHHHHHHhcCchHHHH-----HHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 998611 122111111 11111210 000 000000 00000001000000111123456677889999999
Q ss_pred hhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 192 RLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 192 ~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+|++++|++|+++|+||+++++++..+... .. ....+..+|+|.+|++||.+|
T Consensus 149 ~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~---~~~~~~~~p~L~~w~~~~~~r 201 (215)
T PLN02395 149 RLSKSKYLAGDFVSLADLAHLPFTEYLVGP-IG---KAYLIKDRKHVSAWWDDISSR 201 (215)
T ss_pred HhcCCccccCCCcCHHHHHHHHHHHHHhcc-cc---hhhhhccCchHHHHHHHHHcC
Confidence 999889999999999999998877654321 11 112367899999999999876
No 13
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.91 E-value=4.8e-24 Score=173.95 Aligned_cols=181 Identities=12% Similarity=0.092 Sum_probs=114.7
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC-----CCCCCCCCcceEE-eCCEEecChhhHHHHHhhcC
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA-----EYMSPSNRVPFIK-VGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~-----~~~~P~gkvP~L~-~~g~~l~eS~aI~~YL~~~~ 123 (253)
+||+. ..||+|+||+++|+++|++|+.+.+... ...||.|+||+|+ +||.+++||.+|++||+++|
T Consensus 1 ~Ly~~--------~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~ 72 (209)
T TIGR02182 1 KLYIY--------DHCPFCVRARMIFGLKNIPVEKHVLLNDDEETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLD 72 (209)
T ss_pred CeecC--------CCCChHHHHHHHHHHcCCCeEEEECCCCcchhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhC
Confidence 47777 8899999999999999999999877542 2468999999998 88999999999999999987
Q ss_pred eeeeccCcchHHHhhhhhc------C-C-CCchhHHHhh---HHHHHHHHHHhhhcCcCCC-----CHHHHHHHHHHHHH
Q psy10805 124 YITWCDPTTYREVTKVRHG------A-V-APWPLNIYLT---YKKKLTVQHRLKTLKWLEK-----SLDQVYKDVDKCCQ 187 (253)
Q Consensus 124 ~~~w~~~~~~~~~~~~~~~------~-~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 187 (253)
......+....++ +.+.. . . .+........ ....+.....-...+.+.. ..++..+.+++.|+
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 151 (209)
T TIGR02182 73 GEPLLTGKVSPEI-EAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLE 151 (209)
T ss_pred CCccCCCCChHHH-HHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHH
Confidence 2111111111111 11110 0 0 0000000000 0000000000001111111 11456677899999
Q ss_pred HHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcCh-hHHHHHHHHHhcc
Q psy10805 188 SLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYP-NLVEHCTRIEQTY 249 (253)
Q Consensus 188 ~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p-~L~~~~~ri~~r~ 249 (253)
.||.+|++++|++| ++|+||+++++.+..+.... . ..+| +|.+|++||++|.
T Consensus 152 ~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~--------~-~~~p~~l~~w~~Ri~ar~ 204 (209)
T TIGR02182 152 ELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA--------G-INWPSRVADYLDNMSKKS 204 (209)
T ss_pred HHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec--------C-CCCChHHHHHHHHHHHHh
Confidence 99999999999965 69999999999876543211 0 1356 9999999999874
No 14
>PRK11752 putative S-transferase; Provisional
Probab=99.91 E-value=1.8e-23 Score=176.30 Aligned_cols=184 Identities=14% Similarity=0.166 Sum_probs=117.5
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhc------CCCeEEEecCC---------CCCCCCCCCcceEEeC----CE
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKML------GLKYTVDFRKN---------AEYMSPSNRVPFIKVG----QF 107 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~------gipye~~~~~~---------~~~~~P~gkvP~L~~~----g~ 107 (253)
+.++||.. + ||+|+||+++|+++ |++||.+.++. +...||.|+||+|+++ |.
T Consensus 43 ~~~~Ly~~--------~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~ 113 (264)
T PRK11752 43 HPLQLYSL--------G-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPI 113 (264)
T ss_pred CCeEEecC--------C-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCe
Confidence 46899976 5 89999999999997 99999988862 1246999999999985 36
Q ss_pred EecChhhHHHHHhhcCeeeeccCcchH-HHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhh--cCcCCCCHHHHHHHHHH
Q psy10805 108 LVAELDPIVKFTQNKNYITWCDPTTYR-EVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKT--LKWLEKSLDQVYKDVDK 184 (253)
Q Consensus 108 ~l~eS~aI~~YL~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 184 (253)
+|+||.||++||++++ ..+....... ...+.|+. +.... ... ..... ..+.. ........++...++.+
T Consensus 114 ~L~ES~AIl~YL~~~~-~~L~P~~~~era~v~~wl~----~~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 185 (264)
T PRK11752 114 RVFESGAILLYLAEKF-GAFLPKDLAARTETLNWLF----WQQGS-APF-LGGGF-GHFYAYAPEKIEYAINRFTMEAKR 185 (264)
T ss_pred EEEcHHHHHHHHHHhc-CCcCCCCHHHHHHHHHHHH----HHhhh-hhH-HHHHH-HHHHHhCCccchHHHHHHHHHHHH
Confidence 9999999999999986 2222111111 11122210 00000 000 00000 00100 00001112344566788
Q ss_pred HHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCC-CChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 185 CCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPL-PNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 185 ~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~-~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.|+.||++|++++||+|+++|+|||++++++..+..... ..... ..++.||+|.+|++||.+|
T Consensus 186 ~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~-~~~~~~P~L~~w~~rv~~r 249 (264)
T PRK11752 186 QLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEF-LDVGSYKHVQRWAKEIAER 249 (264)
T ss_pred HHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccc-cCcccCHHHHHHHHHHHhC
Confidence 999999999989999999999999999988765432100 00000 0146899999999999886
No 15
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.91 E-value=2.2e-23 Score=169.09 Aligned_cols=180 Identities=10% Similarity=0.042 Sum_probs=117.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC------CCCCCCCCCcceEE-eCCEEecChhhHHHHHhh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN------AEYMSPSNRVPFIK-VGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~------~~~~~P~gkvP~L~-~~g~~l~eS~aI~~YL~~ 121 (253)
++||+. ..||++++|+++|+++||+|+.+.++. ....||.|+||+|+ ++|.+|+||.+|++||++
T Consensus 1 ~~Ly~~--------~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~ 72 (202)
T PRK10357 1 MKLIGS--------YTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIEL 72 (202)
T ss_pred CeeecC--------CCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHH
Confidence 468888 889999999999999999999988763 12469999999998 578899999999999999
Q ss_pred cCee-eeccCcchHH-HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCC--CHHHHHHHHHHHHHHHHhhhCCCC
Q psy10805 122 KNYI-TWCDPTTYRE-VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEK--SLDQVYKDVDKCCQSLSERLEKNN 197 (253)
Q Consensus 122 ~~~~-~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~Le~~L~~~~ 197 (253)
++.. .+........ ..+.+. .+ ......... ......+. .+.... ..+.....+.+.|+.||++|++++
T Consensus 73 ~~~~~~l~p~~~~~~a~~~~~~----~~-~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~ 145 (202)
T PRK10357 73 LNVAPAMLPRDPLAALRVRQLE----AL-ADGIMDAAL-VSVREQAR-PAAQQSEDELLRQREKINRSLDALEGYLVDGT 145 (202)
T ss_pred hCCCCCCCCCCHHHHHHHHHHH----HH-HHHHHHHHH-HHHHHHhC-ccccccHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 8611 1221111111 111111 00 001010000 00001111 110011 123445678889999999998888
Q ss_pred cccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 198 FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 198 fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
++||++|+||+++++.+..+..... . ......+|+|.+|++||.+|
T Consensus 146 -l~Gd~~t~ADi~l~~~l~~~~~~~~-~---~~~~~~~p~l~~~~~~i~~r 191 (202)
T PRK10357 146 -LKTDTVNLATIAIACAVGYLNFRRV-A---PGWCVDRPHLVKLVENLFQR 191 (202)
T ss_pred -ccCCCcCHHHHHHHHHHHHHHhccc-C---cchhhcChHHHHHHHHHhcC
Confidence 9999999999999988765533211 0 11246799999999999986
No 16
>PRK15113 glutathione S-transferase; Provisional
Probab=99.91 E-value=2.2e-23 Score=170.65 Aligned_cols=179 Identities=12% Similarity=0.046 Sum_probs=113.8
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
.++||+... +.||+|+||+++|+++||+||.+.++.. ...||.|+||+|++||.+|+||.||++|
T Consensus 5 ~~~Ly~~~~------~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~Y 78 (214)
T PRK15113 5 AITLYSDAH------FFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEY 78 (214)
T ss_pred eEEEEeCCC------CCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHH
Confidence 578897510 3699999999999999999999988731 1359999999999999999999999999
Q ss_pred HhhcCee-----eeccCcchH-HHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhh
Q psy10805 119 TQNKNYI-----TWCDPTTYR-EVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSER 192 (253)
Q Consensus 119 L~~~~~~-----~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~ 192 (253)
|++++.. .+... ... +..+.+. .+....+......+ ....+..........+...+.+.+.++.||++
T Consensus 79 L~~~~~~~~~~~l~p~~-~~~ra~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~ 152 (214)
T PRK15113 79 LEERFAPPAWERIYPAD-LQARARARQIQ----AWLRSDLMPLREER-PTDVVFAGAKKAPLSEAGKAAAEKLFAVAERL 152 (214)
T ss_pred HHHHcCCCCccccCCCC-HHHHHHHHHHH----HHHHhhhHHHhccC-ccchhccCCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999711 22111 111 1111111 00000000000000 00000000011122355667789999999999
Q ss_pred hCC-CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 193 LEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 193 L~~-~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
|++ ++|++|+ +|+||+++++.+..+..... .-.|+|.+|++||.+|
T Consensus 153 L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~---------~~~p~l~~~~~r~~~r 199 (214)
T PRK15113 153 LAPGQPNLFGE-WCIADTDLALMLNRLVLHGD---------EVPERLADYATFQWQR 199 (214)
T ss_pred HhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC---------CCCHHHHHHHHHHhcC
Confidence 975 4799996 99999999998765543211 1127888888888765
No 17
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.91 E-value=2.9e-23 Score=168.15 Aligned_cols=166 Identities=17% Similarity=0.125 Sum_probs=109.3
Q ss_pred chHHHHHHHHHhcCCCeEEEecCC----------CCCCCCCCCcceEE-eCCEEecChhhHHHHHhhcCe--eeeccCcc
Q psy10805 66 AHCLAVQAYLKMLGLKYTVDFRKN----------AEYMSPSNRVPFIK-VGQFLVAELDPIVKFTQNKNY--ITWCDPTT 132 (253)
Q Consensus 66 p~~~kv~~~L~~~gipye~~~~~~----------~~~~~P~gkvP~L~-~~g~~l~eS~aI~~YL~~~~~--~~w~~~~~ 132 (253)
++++|++++|+++||+|+.+.++. +...||.|+||+|+ +||.+|+||.+|++||++++. ..+.....
T Consensus 9 s~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~ 88 (201)
T PRK10542 9 ACSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGS 88 (201)
T ss_pred HHHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCc
Confidence 479999999999999999988762 11359999999998 578899999999999999861 12221111
Q ss_pred hHH-HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHH
Q psy10805 133 YRE-VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALL 211 (253)
Q Consensus 133 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~ 211 (253)
... ..+.+.. +.... +.... .........+...+.....+.+.|+.||.+|++++||+|+++|+||+++
T Consensus 89 ~~ra~~~~~~~----~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l 158 (201)
T PRK10542 89 LSRYHTIEWLN----YIATE-----LHKGF-TPLFRPDTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYL 158 (201)
T ss_pred HHHHHHHHHHH----HHHhh-----hhhhh-hhccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHH
Confidence 111 1111110 00000 00000 0010000001112334566788999999999989999999999999999
Q ss_pred HHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 212 FGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 212 ~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
++++........ .++.+|+|.+|++||.+|
T Consensus 159 ~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 188 (201)
T PRK10542 159 FTVLRWAYAVKL-------NLEGLEHIAAYMQRVAER 188 (201)
T ss_pred HHHHHHhhccCC-------CcccchHHHHHHHHHHcC
Confidence 988766543221 136799999999999876
No 18
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.91 E-value=2e-23 Score=170.21 Aligned_cols=171 Identities=16% Similarity=0.125 Sum_probs=112.8
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCC----------CCCCCCCCCcceEEeCCEEecChhhHHHHHhhcCeeeeccCcc
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKN----------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKNYITWCDPTT 132 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~----------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~~~w~~~~~ 132 (253)
..||+|+|++++|.++||+|+.+.++. ....||.|+||+|+++|.+|+||.+|++||++++....+.+.+
T Consensus 6 ~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~ 85 (210)
T TIGR01262 6 WRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPAD 85 (210)
T ss_pred CCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCC
Confidence 779999999999999999999987762 1235999999999999999999999999999986211122211
Q ss_pred hHH--Hhhhhhc---CCCCchhHHHhhHHHHHHHHHHhh-hcCcCCCC-HHHHHHHHHHHHHHHHhhhCC--CCcccCCC
Q psy10805 133 YRE--VTKVRHG---AVAPWPLNIYLTYKKKLTVQHRLK-TLKWLEKS-LDQVYKDVDKCCQSLSERLEK--NNFFFKDK 203 (253)
Q Consensus 133 ~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~l~~Le~~L~~--~~fl~Gd~ 203 (253)
-.+ ..+.+.. ..+...... .....+. ..+..... .+...+.+.+.|+.||++|++ ++||+|++
T Consensus 86 ~~~~a~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~ 157 (210)
T TIGR01262 86 PIKRARVRALALLIACDIHPLNNL--------RVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDT 157 (210)
T ss_pred HHHHHHHHHHHHHHhcccChhhhh--------hHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCC
Confidence 111 1111110 000000000 0000110 00111111 122345678899999999986 46999999
Q ss_pred CChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 204 PTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 204 ~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+|+||+++++.+..+..... .++.||+|.+|++||.+|
T Consensus 158 ~T~ADi~~~~~l~~~~~~~~-------~~~~~p~l~~~~~~~~~r 195 (210)
T TIGR01262 158 PTLADLCLVPQVYNAERFGV-------DLTPYPTLRRIAAALAAL 195 (210)
T ss_pred CCHHHHHHHHHHHHHHHcCC-------CcccchHHHHHHHHHhcC
Confidence 99999999998876543221 146899999999999886
No 19
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.90 E-value=1.3e-22 Score=165.13 Aligned_cols=173 Identities=19% Similarity=0.258 Sum_probs=116.7
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC--C----------CCCCCCCcceEEeCCEEecChhhH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA--E----------YMSPSNRVPFIKVGQFLVAELDPI 115 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~--~----------~~~P~gkvP~L~~~g~~l~eS~aI 115 (253)
.++||.. ..++++.+|+++|+++||+|+.+.++.. + ..||.|+||+|++||.+|+||.||
T Consensus 4 ~~~L~y~--------~~~~~~~~vrl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI 75 (205)
T PTZ00057 4 EIVLYYF--------DARGKAELIRLIFAYLGIEYTDKRFGENGDAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAI 75 (205)
T ss_pred ceEEEec--------CCCcchHHHHHHHHHcCCCeEEEeccccchHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHH
Confidence 4789987 7899999999999999999999877520 1 369999999999999999999999
Q ss_pred HHHHhhcCeeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCC
Q psy10805 116 VKFTQNKNYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEK 195 (253)
Q Consensus 116 ~~YL~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~ 195 (253)
++||++++ ... ............+.. ....+. ...... .... ....+...+.+.+.+..||+.|++
T Consensus 76 ~~YLa~~~-~~~-~~~~~~~~~~~~~~~----~~~~~~-~~~~~~--~~~~-----~~~~~~~~~~~~~~l~~le~~L~~ 141 (205)
T PTZ00057 76 VRYLSKKY-KIC-GESELNEFYADMIFC----GVQDIH-YKFNNT--NLFK-----QNETTFLNEELPKWSGYFENILKK 141 (205)
T ss_pred HHHHHHHc-CCC-CCCHHHHHHHHHHHH----HHHHHH-HHHhhh--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999996 211 111111111111100 000000 000000 0000 011233456778899999999975
Q ss_pred C--CcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 196 N--NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 196 ~--~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+ +||+|+++|+||+++++.+..+... . ...+++||+|.+|++||.++
T Consensus 142 ~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-----~~~l~~~P~l~~~~~r~~~~ 190 (205)
T PTZ00057 142 NHCNYFVGDNLTYADLAVFNLYDDIETK-Y-----PNSLKNFPLLKAHNEFISNL 190 (205)
T ss_pred CCCCeeeCCcccHHHHHHHHHHHHHHHh-C-----hhhhccChhHHHHHHHHHhC
Confidence 3 8999999999999999877654321 1 22467899999999999875
No 20
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.90 E-value=9.4e-23 Score=171.35 Aligned_cols=162 Identities=20% Similarity=0.216 Sum_probs=110.6
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCC------CCCCCCCCCcceEEeCCEEecChhhHHHHHhhcCee-eeccCcchHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKN------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKNYI-TWCDPTTYRE 135 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~~-~w~~~~~~~~ 135 (253)
..||+|+|++++|+++||||+.+.++. +...||.|+||+|+++|.+|+||.+|++||+++|.. ...++ ..
T Consensus 71 g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~~~--~e- 147 (265)
T PLN02817 71 GDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLATP--PE- 147 (265)
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCCCH--HH-
Confidence 569999999999999999999988873 124699999999999999999999999999999711 11111 11
Q ss_pred HhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHHH
Q psy10805 136 VTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGH 214 (253)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~-~~fl~Gd~~t~aD~~~~~~ 214 (253)
+..+. ..+.. .....+.. ....++..+.+.+.|+.||++|++ ++||+|+++|+||+++++.
T Consensus 148 --ra~i~-------~~l~~-----~~~~~~~~----~~~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~ 209 (265)
T PLN02817 148 --KASVG-------SKIFS-----TFIGFLKS----KDPGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPK 209 (265)
T ss_pred --HHHHH-------HHHHH-----HHHHHhcc----CCcchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHH
Confidence 11110 00000 01011110 111122345677889999999974 6999999999999999998
Q ss_pred HHHHhcCCCCChhHH--HHHhcChhHHHHHHHHHhc
Q psy10805 215 IYAVLTTPLPNNRFA--STIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 215 l~~~~~~~~~~~~l~--~~l~~~p~L~~~~~ri~~r 248 (253)
+..+... + .... ...+.+|+|.+|++||.+|
T Consensus 210 L~~l~~~-~--~~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 210 LYHLEIA-L--GHYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred HHHHHHH-H--HHhcCCCccccCHHHHHHHHHHhcc
Confidence 8655321 0 0000 1236899999999999876
No 21
>KOG0868|consensus
Probab=99.87 E-value=6e-22 Score=150.80 Aligned_cols=177 Identities=16% Similarity=0.165 Sum_probs=117.5
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC----------CCCCCCCCCcceEEeCCEEecChhhHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN----------AEYMSPSNRVPFIKVGQFLVAELDPIV 116 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~----------~~~~~P~gkvP~L~~~g~~l~eS~aI~ 116 (253)
.+-+||.+ +-|.+++|||++|..|||+||.++++. +...||.+|||+|++||.+|+||.||+
T Consensus 4 ~KpiLYSY--------WrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII 75 (217)
T KOG0868|consen 4 AKPILYSY--------WRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAII 75 (217)
T ss_pred ccchhhhh--------hcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHH
Confidence 35678888 889999999999999999999999983 224699999999999999999999999
Q ss_pred HHHhhcCeeeeccCcchH--HHhhhh---hcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHh
Q psy10805 117 KFTQNKNYITWCDPTTYR--EVTKVR---HGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSE 191 (253)
Q Consensus 117 ~YL~~~~~~~w~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~ 191 (253)
+||++++...-+-+.... +..|.. +.+.+. |++.. .+...+. .........-....+.+.+.+||+
T Consensus 76 ~YLeEt~P~ppLLP~d~~KRA~~r~i~~~i~sgIQ-PlQNl-------~vl~~l~-ek~~~~~~~W~q~~ItkGF~ALEk 146 (217)
T KOG0868|consen 76 EYLEETYPDPPLLPKDPHKRAKARAISLLIASGIQ-PLQNL-------SVLKMLN-EKEPGYGDQWAQHFITKGFTALEK 146 (217)
T ss_pred HHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHhCCC-cchhh-------HHHHHhc-ccccchhhHHHHHHHHHhHHHHHH
Confidence 999999722212221111 111111 111111 11110 0111111 000001122334556788999999
Q ss_pred hhCC--CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHh
Q psy10805 192 RLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 247 (253)
Q Consensus 192 ~L~~--~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~ 247 (253)
.|.. ++|.+||++|+||+.+.+.+..... +.-.+..||-+.+..+++.+
T Consensus 147 lL~~~aGkycvGDevtiADl~L~pqv~nA~r-------f~vdl~PYPti~ri~e~l~e 197 (217)
T KOG0868|consen 147 LLKSHAGKYCVGDEVTIADLCLPPQVYNANR-------FHVDLTPYPTITRINEELAE 197 (217)
T ss_pred HHHHccCCcccCceeehhhhccchhhhhhhh-------ccccCCcCchHHHHHHHHHh
Confidence 9864 6899999999999999888765422 22345788988888877754
No 22
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.87 E-value=3.5e-21 Score=144.41 Aligned_cols=123 Identities=53% Similarity=1.047 Sum_probs=110.5
Q ss_pred eeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCCCCcccCCC
Q psy10805 124 YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDK 203 (253)
Q Consensus 124 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~ 203 (253)
+.+|+++.+|..+.+.++...+|++++.++++..++.+.+.+..+|+++...+++.+.+++.|+.|+++|++++||+||+
T Consensus 4 ~~~w~d~~~~~~~~~~~~~~~~p~~l~~~~~~~~r~~~~~~l~~~G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~ 83 (126)
T cd03211 4 YISWCDEETYDEVTKPRYGSPYPWPLNHILPYQKQREARRKLKAIGWDDKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQ 83 (126)
T ss_pred eehccCcchHHHHhHHHHccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 47899999999888888877799999999999899999899999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHH
Q psy10805 204 PTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 246 (253)
Q Consensus 204 ~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~ 246 (253)
||.+|+++|+++..+...+.+++.+...++++|||.+|++||.
T Consensus 84 pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 84 PTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 9999999999998887654555567767899999999999983
No 23
>KOG0867|consensus
Probab=99.86 E-value=2.9e-21 Score=159.08 Aligned_cols=185 Identities=16% Similarity=0.168 Sum_probs=124.8
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--C-------CCCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--A-------EYMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~-------~~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
.++||.. ..||+|++|.++++++|++||.+.++. + ..+||.|+||+|+|||..++||.||+.|
T Consensus 2 ~~~ly~~--------~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Y 73 (226)
T KOG0867|consen 2 KLKLYGH--------LGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRY 73 (226)
T ss_pred CceEeec--------CCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHH
Confidence 4678888 899999999999999999999997762 1 2369999999999999999999999999
Q ss_pred HhhcCe---e-eeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHH-hhhcCcCCCCHHHHHHHHHHHHHHHHhhh
Q psy10805 119 TQNKNY---I-TWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHR-LKTLKWLEKSLDQVYKDVDKCCQSLSERL 193 (253)
Q Consensus 119 L~~~~~---~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~Le~~L 193 (253)
|.++|. . .|.......+....+. . +....+.+....+.+... +..........++...++.+.++.+|+.|
T Consensus 74 l~~ky~~~~~~l~p~~~~~ra~v~~~l-~---~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 149 (226)
T KOG0867|consen 74 LAEKYGPLGGILLPKDLKERAIVDQWL-E---FENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFL 149 (226)
T ss_pred HHHHcCCCCcccCCcCHHHHHHHHHHH-H---hhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 999861 1 1111110011111111 0 000000000000000001 11111223345677888999999999999
Q ss_pred CCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 194 EKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 194 ~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.++.|+.|+++|+||+.+.+.+..+.. .. . ......++|++.+|++++.++
T Consensus 150 ~~~~yl~g~~~tlADl~~~~~~~~~~~-~~--~-~~~~~~~~p~v~~W~~~~~~~ 200 (226)
T KOG0867|consen 150 KTQVYLAGDQLTLADLSLASTLSQFQG-KF--A-TEKDFEKYPKVARWYERIQKR 200 (226)
T ss_pred ccCCcccCCcccHHHHHHhhHHHHHhH-hh--h-hhhhhhhChHHHHHHHHHHhC
Confidence 999999999999999998888776531 11 0 123457999999999999985
No 24
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.85 E-value=1.3e-20 Score=143.26 Aligned_cols=127 Identities=39% Similarity=0.723 Sum_probs=107.8
Q ss_pred eeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhh------hcCcCCCCHHHHHHHHHHHHHHHHhhhCCCC
Q psy10805 124 YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLK------TLKWLEKSLDQVYKDVDKCCQSLSERLEKNN 197 (253)
Q Consensus 124 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~ 197 (253)
+.+|+++.+|..+++++|.+.+|++++.+++...++++.+++. ..|.++...++..+++.++++.||++|++++
T Consensus 5 ~~~w~d~~n~~~~~~~~y~~~~p~pl~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~L~~~~ 84 (137)
T cd03212 5 HTFWVDPKNYDTVTRPWYASHIPFPLNFYLPGKMQRRALDRLQLTRGFSPLDSETEVEAEIYRDAKECLNLLSQRLGESQ 84 (137)
T ss_pred HhhHcCcchHHHHHHHHHccCCCCcHHHHhhHHHHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHHHHHHHCCCC
Confidence 3689999999999999998789999999998887777766532 2333445678888999999999999999999
Q ss_pred cccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhccC
Q psy10805 198 FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQTYF 250 (253)
Q Consensus 198 fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r~~ 250 (253)
||+||+||.+|+++|+++..+...+++..++...+.++|||.+|++||.++||
T Consensus 85 ~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~~~f 137 (137)
T cd03212 85 FFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILSLYF 137 (137)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHHhcC
Confidence 99999999999999999988876556556777778999999999999999987
No 25
>KOG4420|consensus
Probab=99.83 E-value=2.6e-20 Score=149.75 Aligned_cols=191 Identities=15% Similarity=0.195 Sum_probs=123.9
Q ss_pred CCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--CC-------CCCCCCCcceEEeCCEEecChhhHH
Q psy10805 46 PDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--AE-------YMSPSNRVPFIKVGQFLVAELDPIV 116 (253)
Q Consensus 46 ~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~~-------~~~P~gkvP~L~~~g~~l~eS~aI~ 116 (253)
+...+||+. +.|-.++||++++.+|||+|+...|+. .+ .+||.|.||||++|+.+|+++.-|+
T Consensus 24 ~e~~vLyhh--------pysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqII 95 (325)
T KOG4420|consen 24 RESLVLYHH--------PYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQII 95 (325)
T ss_pred hhcceeeec--------CcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHH
Confidence 345799999 899999999999999999999988873 12 3699999999999999999999999
Q ss_pred HHHhhcC-eeeeccCc----------chHHHh--------------hhh--hcCCCCch--hHHHhhHHHHHHHH-----
Q psy10805 117 KFTQNKN-YITWCDPT----------TYREVT--------------KVR--HGAVAPWP--LNIYLTYKKKLTVQ----- 162 (253)
Q Consensus 117 ~YL~~~~-~~~w~~~~----------~~~~~~--------------~~~--~~~~~~~~--~~~~~~~~~~~~~~----- 162 (253)
+|++++| .++-+-++ +|+++. .+- ..+.+|.. ++..+.... +.+.
T Consensus 96 dYvErtf~ger~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~-~~v~~l~~~ 174 (325)
T KOG4420|consen 96 DYVERTFTGERVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKAT-TDVMKLDHE 174 (325)
T ss_pred HHHHHhhcccccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHH-HHHHHHHhh
Confidence 9999987 00000000 011100 000 00111211 111110000 0000
Q ss_pred -------------HHhhhcCcCCCC---HHHHHHHHHHHHHHHHhhhCC----CCcccCCCCChhhHHHHHHHHHHhcCC
Q psy10805 163 -------------HRLKTLKWLEKS---LDQVYKDVDKCCQSLSERLEK----NNFFFKDKPTELDALLFGHIYAVLTTP 222 (253)
Q Consensus 163 -------------~~~~~~~~~~~~---~~~~~~~~~~~l~~Le~~L~~----~~fl~Gd~~t~aD~~~~~~l~~~~~~~ 222 (253)
+++...-....+ ..++.+.+...|+.+|+.|.+ ..|++|+++|+||+++...|.++...+
T Consensus 175 e~pdla~ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg 254 (325)
T KOG4420|consen 175 EEPDLAEAYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLG 254 (325)
T ss_pred cCchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcc
Confidence 001000000011 234556667788888888876 689999999999999999999988765
Q ss_pred CCChhHHHHHh--cChhHHHHHHHHHhcc
Q psy10805 223 LPNNRFASTIR--AYPNLVEHCTRIEQTY 249 (253)
Q Consensus 223 ~~~~~l~~~l~--~~p~L~~~~~ri~~r~ 249 (253)
+. ..... ..|||.+|++|+++|.
T Consensus 255 ~e----~~yw~~gsrpnle~Yf~rvrrR~ 279 (325)
T KOG4420|consen 255 LE----KKYWEDGSRPNLESYFERVRRRF 279 (325)
T ss_pred cH----HHhcccCCCccHHHHHHHHHhhh
Confidence 42 22333 7899999999999884
No 26
>KOG1695|consensus
Probab=99.76 E-value=1.8e-17 Score=132.87 Aligned_cols=172 Identities=15% Similarity=0.091 Sum_probs=109.9
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC-C-----CCCCCCcceEEeCCEEecChhhHHHHHhhcCeeeeccCcchHHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE-Y-----MSPSNRVPFIKVGQFLVAELDPIVKFTQNKNYITWCDPTTYREV 136 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~-~-----~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~~~w~~~~~~~~~ 136 (253)
...-.+.-+|+++...|++||.+++.... | ..|.||||+|..||..|.+|.||++||+++| ..--.. .+++.
T Consensus 10 ~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~-gl~Gkt-~~E~a 87 (206)
T KOG1695|consen 10 NIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKF-GLAGKT-EEEEA 87 (206)
T ss_pred CcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHh-CcCCCC-HHHHH
Confidence 55667889999999999999999997433 2 3699999999999999999999999999997 111111 11111
Q ss_pred hhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHH-HHHHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHH
Q psy10805 137 TKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLD-QVYKDVDKCCQSLSERLE--KNNFFFKDKPTELDALLFG 213 (253)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~Le~~L~--~~~fl~Gd~~t~aD~~~~~ 213 (253)
--+.+.+.+......+..... .. ...+......+ .......+.+..+++.|+ ++.||+||++|+||+.++.
T Consensus 88 ~vD~i~d~~~D~~~~~~~~~~----~~--~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e 161 (206)
T KOG1695|consen 88 WVDMIVDQFKDFRWEIFRQPY----TA--PEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAE 161 (206)
T ss_pred HHHHHHHhhhhHHHHHHHHhh----hh--hhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHH
Confidence 111121211111111010000 00 00110011111 344556778888898887 5689999999999999999
Q ss_pred HHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHh
Q psy10805 214 HIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 247 (253)
Q Consensus 214 ~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~ 247 (253)
++..+... +. ...+..+|+|+++.+||.+
T Consensus 162 ~l~~l~~~-~~----~~~~~~~P~L~a~~~kv~~ 190 (206)
T KOG1695|consen 162 HLDTLEEL-LD----PSALDHFPKLKAFKERVSS 190 (206)
T ss_pred HHHHHHHh-cC----chhhccChHHHHHHHHHhc
Confidence 98877652 11 2235677888888888765
No 27
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.74 E-value=7.2e-18 Score=115.00 Aligned_cols=72 Identities=26% Similarity=0.435 Sum_probs=64.3
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHhhcC
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~ 123 (253)
+||+. +++.++++.||+|+|++++|+++|++|+.+.++. ...||.|+||+|+++|.+++||.+|++||+++|
T Consensus 3 ~L~~~-~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~ 74 (75)
T cd03080 3 TLYQF-PRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL-AKRSPKGKLPFIELNGEKIADSELIIDHLEEKY 74 (75)
T ss_pred EEEec-CCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-ccCCCCCCCCEEEECCEEEcCHHHHHHHHHHHc
Confidence 56755 5567788999999999999999999999998874 368999999999999999999999999999875
No 28
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.74 E-value=9e-18 Score=112.89 Aligned_cols=74 Identities=62% Similarity=1.043 Sum_probs=65.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
+.||+++.+...+.+.+++|.|++++|++.|+|||.+...+....+|.||||+|++||.+++||.+|+.||+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~kv~~~L~elglpye~~~~~~~~~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 1 AALYQPYEEEQILLPDNASCLAVQTFLKMCNLPFNVRCRANAEFMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CccccCCccCeeecCCCCCHHHHHHHHHHcCCCcEEEecCCccccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 35788888888888899999999999999999999986644346899999999999999999999999999874
No 29
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.72 E-value=2.8e-17 Score=111.15 Aligned_cols=71 Identities=31% Similarity=0.580 Sum_probs=63.2
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
.||+.++ ..++++.||+|+|++++|+++||||+.+.++. .+.||.|+||+|+++|..+.||.+|++||+++
T Consensus 2 ~L~~~~~-~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~-~~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 2 ELYQWGR-AFGLPSLSPECLKVETYLRMAGIPYEVVFSSN-PWRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred EEEEeCC-CCCCCCCCHHHHHHHHHHHhCCCceEEEecCC-cccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 4665543 67888999999999999999999999999975 35799999999999999999999999999875
No 30
>KOG3029|consensus
Probab=99.69 E-value=2.1e-15 Score=122.87 Aligned_cols=67 Identities=24% Similarity=0.350 Sum_probs=57.8
Q ss_pred CCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC----CCCCCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 46 PDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA----EYMSPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 46 ~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~----~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
|-+++|||+ ..||||.|||++|.+.||||++++|+.- -.-|-..|||+|...|..+.||.+|+.-|+
T Consensus 88 ~L~l~LyQy--------etCPFCcKVrAFLDyhgisY~VVEVnpV~r~eIk~SsykKVPil~~~Geqm~dSsvIIs~la 158 (370)
T KOG3029|consen 88 PLDLVLYQY--------ETCPFCCKVRAFLDYHGISYAVVEVNPVLRQEIKWSSYKKVPILLIRGEQMVDSSVIISLLA 158 (370)
T ss_pred CceEEEEee--------ccCchHHHHHHHHhhcCCceEEEEecchhhhhccccccccccEEEeccceechhHHHHHHHH
Confidence 348899999 9999999999999999999999999841 134678999999987778999999998663
No 31
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.68 E-value=1.2e-16 Score=111.81 Aligned_cols=62 Identities=15% Similarity=0.266 Sum_probs=56.2
Q ss_pred CCCCchHHHHHHHHHhcCCCeEEEecCC------CCCCCCCCCcceEEeCCEEecChhhHHHHHhhcC
Q psy10805 62 LPDNAHCLAVQAYLKMLGLKYTVDFRKN------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 62 ~~~sp~~~kv~~~L~~~gipye~~~~~~------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~ 123 (253)
...||||+|++++|++|||+|+++.++. +...||.|+||+|+++|.+++||.+|++||++++
T Consensus 19 ~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~ 86 (91)
T cd03061 19 IGNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETL 86 (91)
T ss_pred CCCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHc
Confidence 4789999999999999999999999873 1246999999999999999999999999999975
No 32
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=1.7e-16 Score=108.69 Aligned_cols=67 Identities=19% Similarity=0.217 Sum_probs=58.8
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEe--CCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKV--GQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~--~g~~l~eS~aI~~YL 119 (253)
++||+. +.||+|+|++++|+++||||+.+.+.... ..||.|+||+|++ +|.+++||.+|++||
T Consensus 2 ~~Ly~~--------~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL 73 (77)
T cd03041 2 LELYEF--------EGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYL 73 (77)
T ss_pred ceEecC--------CCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHH
Confidence 578988 89999999999999999999999886422 3589999999997 468999999999999
Q ss_pred hhcC
Q psy10805 120 QNKN 123 (253)
Q Consensus 120 ~~~~ 123 (253)
+++|
T Consensus 74 ~~~~ 77 (77)
T cd03041 74 FKTY 77 (77)
T ss_pred HHhC
Confidence 9874
No 33
>PLN02907 glutamate-tRNA ligase
Probab=99.67 E-value=8.1e-16 Score=144.49 Aligned_cols=152 Identities=20% Similarity=0.261 Sum_probs=102.7
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEe-CCEEecChhhHHHHHhhcCe-ee
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKV-GQFLVAELDPIVKFTQNKNY-IT 126 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~-~g~~l~eS~aI~~YL~~~~~-~~ 126 (253)
++||.. +.| .+.++.++|++.|++|+.+. .+|.|+||+|++ +|..|+||.||++||++++. ..
T Consensus 3 ~kLy~~--------~~S-~~~~v~~~L~~lgv~~e~~~------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~ 67 (722)
T PLN02907 3 AKLSFP--------PDS-PPLAVIAAAKVAGVPLTIDP------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPG 67 (722)
T ss_pred EEEEEC--------CCC-ChHHHHHHHHHcCCCcEEee------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcC
Confidence 467765 444 46679999999999999975 258999999995 78899999999999999851 11
Q ss_pred eccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCCCCcccCCCCCh
Q psy10805 127 WCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTE 206 (253)
Q Consensus 127 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~ 206 (253)
+... .-. .+..+ ...+.+. ..+ . . ...+.+.++.||.+|++++||+|+++|+
T Consensus 68 L~p~-d~~--erAqV--------~qWL~~~------~~~-----~--~----~~~l~~~L~~LE~~L~~rtYLvGd~lTL 119 (722)
T PLN02907 68 FYGQ-DAF--ESSQV--------DEWLDYA------PTF-----S--S----GSEFENACEYVDGYLASRTFLVGYSLTI 119 (722)
T ss_pred CCCC-CHH--HHHHH--------HHHHHHH------hhc-----c--c----HHHHHHHHHHHHHHhccCCeecCCCCCH
Confidence 1110 000 00000 0000000 000 0 0 1245678899999999999999999999
Q ss_pred hhHHHHHHHHHH--hcCCCCChhHHHHHhcChhHHHHHHHHHhcc
Q psy10805 207 LDALLFGHIYAV--LTTPLPNNRFASTIRAYPNLVEHCTRIEQTY 249 (253)
Q Consensus 207 aD~~~~~~l~~~--~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r~ 249 (253)
||+++++.+... .+... ..+..+|+|.+|+++|.++-
T Consensus 120 ADIaL~~~L~~~~~~~~~~------~~~~~yPnL~RW~erI~arP 158 (722)
T PLN02907 120 ADIAIWSGLAGSGQRWESL------RKSKKYQNLVRWFNSISAEY 158 (722)
T ss_pred HHHHHHHHHHhhhhhhhcc------cccccCHHHHHHHHHHHhCC
Confidence 999999887543 11110 12468999999999999873
No 34
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.67 E-value=1.7e-16 Score=108.18 Aligned_cols=61 Identities=16% Similarity=0.318 Sum_probs=56.1
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC------CCCCCCCcceEEeCCEEecChhhHHHHHhhcC
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE------YMSPSNRVPFIKVGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~------~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~ 123 (253)
+.||+|+|++++|+++||+|+.+.++... ..||.|+||+|++||.+++||.+|++||+++|
T Consensus 5 ~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~ 71 (75)
T PF13417_consen 5 PGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERY 71 (75)
T ss_dssp TTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHc
Confidence 89999999999999999999999987432 25899999999999999999999999999985
No 35
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.66 E-value=1.8e-16 Score=107.41 Aligned_cols=64 Identities=16% Similarity=0.262 Sum_probs=56.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--C-------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--A-------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~-------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||+. +.||+|+||+++|+++|++|+.+.++. . ...||.|+||+|++||.+++||.+|++||
T Consensus 1 ~~ly~~--------~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yL 72 (73)
T cd03052 1 LVLYHW--------TQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYL 72 (73)
T ss_pred CEEecC--------CCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHh
Confidence 368888 889999999999999999999998863 1 13599999999999999999999999999
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 73 e 73 (73)
T cd03052 73 E 73 (73)
T ss_pred C
Confidence 5
No 36
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.64 E-value=5.8e-16 Score=107.87 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=59.7
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC--C------CCCCCCCcceEEeC-CEEecChhhHHHHHh
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA--E------YMSPSNRVPFIKVG-QFLVAELDPIVKFTQ 120 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~--~------~~~P~gkvP~L~~~-g~~l~eS~aI~~YL~ 120 (253)
+||..+++ .+..+.||+|+|++++|+++|++|+.+.++.. . ..||.|+||+|+++ |..++||.+|++||+
T Consensus 2 ~~~~~~~~-~~~~~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~ 80 (84)
T cd03038 2 TLYDLAGK-DPVRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGELTSGGFYTVPVIVDGSGEVIGDSFAIAEYLE 80 (84)
T ss_pred eeEeccCC-CCCCCcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccccCCCCceeCeEEECCCCEEeCHHHHHHHHH
Confidence 44544333 33468999999999999999999999887631 1 24899999999998 899999999999999
Q ss_pred hcC
Q psy10805 121 NKN 123 (253)
Q Consensus 121 ~~~ 123 (253)
++|
T Consensus 81 ~~~ 83 (84)
T cd03038 81 EAY 83 (84)
T ss_pred HhC
Confidence 875
No 37
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.64 E-value=7.8e-16 Score=104.14 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=59.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCCCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPSNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
++||.. +.||+|+|++++|+++|++|+.+.++.. ...||.|+||+|++||..++||.+|++||+++
T Consensus 1 ~~ly~~--------~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 72 (73)
T cd03059 1 MTLYSG--------PDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDER 72 (73)
T ss_pred CEEEEC--------CCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhh
Confidence 468877 8899999999999999999999988731 13599999999999999999999999999987
Q ss_pred C
Q psy10805 123 N 123 (253)
Q Consensus 123 ~ 123 (253)
|
T Consensus 73 ~ 73 (73)
T cd03059 73 F 73 (73)
T ss_pred C
Confidence 4
No 38
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.63 E-value=8.5e-16 Score=104.38 Aligned_cols=67 Identities=19% Similarity=0.194 Sum_probs=58.8
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCC-CCcceEEeCCEEecChhhHHHHHhh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPS-NRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~-gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
++||+. ..||+|+|++++|+++|++|+.+.++.. ...||. |+||+|++||.+++||.+|++||++
T Consensus 1 ~~Ly~~--------~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~ 72 (74)
T cd03058 1 VKLLGA--------WASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDE 72 (74)
T ss_pred CEEEEC--------CCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHh
Confidence 468888 8899999999999999999999887631 135895 9999999999999999999999998
Q ss_pred cC
Q psy10805 122 KN 123 (253)
Q Consensus 122 ~~ 123 (253)
++
T Consensus 73 ~~ 74 (74)
T cd03058 73 AW 74 (74)
T ss_pred hC
Confidence 64
No 39
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.63 E-value=8.9e-16 Score=104.19 Aligned_cols=65 Identities=25% Similarity=0.370 Sum_probs=57.7
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--C-------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--A-------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~-------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||.. +.||+|+|++++|+++|++|+.+.++. . ...||.|+||+|+++|..++||.||++||
T Consensus 1 ~~Ly~~--------~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL 72 (74)
T cd03045 1 IDLYYL--------PGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYL 72 (74)
T ss_pred CEEEeC--------CCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHH
Confidence 468888 899999999999999999999988862 1 13699999999999999999999999999
Q ss_pred hh
Q psy10805 120 QN 121 (253)
Q Consensus 120 ~~ 121 (253)
++
T Consensus 73 ~~ 74 (74)
T cd03045 73 VE 74 (74)
T ss_pred hC
Confidence 75
No 40
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.62 E-value=1.2e-15 Score=104.12 Aligned_cols=67 Identities=27% Similarity=0.317 Sum_probs=59.1
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC--C-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA--E-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~--~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||+. +.|++|++++++|+++|++|+.+.++.. + ..||.|+||+|+++|.+++||.||++||
T Consensus 1 ~~ly~~--------~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl 72 (76)
T cd03050 1 LKLYYD--------LMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYL 72 (76)
T ss_pred CEEeeC--------CCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHH
Confidence 368888 8999999999999999999999988631 1 3589999999999999999999999999
Q ss_pred hhcC
Q psy10805 120 QNKN 123 (253)
Q Consensus 120 ~~~~ 123 (253)
+++|
T Consensus 73 ~~~~ 76 (76)
T cd03050 73 ARKF 76 (76)
T ss_pred HhhC
Confidence 9874
No 41
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.62 E-value=1e-15 Score=103.10 Aligned_cols=65 Identities=20% Similarity=0.284 Sum_probs=56.9
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-----CCCCCCCcceEEeC-CEEecChhhHHHHHhh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-----YMSPSNRVPFIKVG-QFLVAELDPIVKFTQN 121 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-----~~~P~gkvP~L~~~-g~~l~eS~aI~~YL~~ 121 (253)
++||.. +.||+|+|++++|.++|++|+.+.++... ..+|.|+||+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~--------~~~p~~~rvr~~L~~~gl~~~~~~~~~~~~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIY--------EHCPFCVKARMIAGLKNIPVEQIILQNDDEATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEec--------CCCcHhHHHHHHHHHcCCCeEEEECCCCchHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 368888 89999999999999999999999887421 25899999999986 8899999999999975
No 42
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.62 E-value=2.4e-15 Score=101.66 Aligned_cols=71 Identities=24% Similarity=0.323 Sum_probs=61.8
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
+||... +..++|+.||+|+|+.++|+.+|+||+++..++ +..+|.||+|+|+++|+.+.+|..|++||.++
T Consensus 2 ~L~~~~-~~~g~ps~sp~clk~~~~Lr~~~~~~~v~~~~n-~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 2 ELHVWG-GDWGLPSVDPECLAVLAYLKFAGAPLKVVPSNN-PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred EEEEEC-CCCCCCcCCHHHHHHHHHHHcCCCCEEEEecCC-CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 355442 345778999999999999999999999997766 67899999999999999999999999999875
No 43
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.61 E-value=1.7e-15 Score=103.34 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=58.5
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||+. +.||+|+|++++|+++|++|+.+.++.. ...||.|+||+|+++|..++||.||++||
T Consensus 2 ~~Ly~~--------~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL 73 (76)
T cd03053 2 LKLYGA--------AMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYL 73 (76)
T ss_pred eEEEeC--------CCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHH
Confidence 578888 8999999999999999999999877631 13599999999999999999999999999
Q ss_pred hhc
Q psy10805 120 QNK 122 (253)
Q Consensus 120 ~~~ 122 (253)
+++
T Consensus 74 ~~~ 76 (76)
T cd03053 74 AEK 76 (76)
T ss_pred hhC
Confidence 874
No 44
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.60 E-value=2.8e-15 Score=101.55 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=58.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC------CCCCCCCCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
++||+. +.|++|++++++|+++|++|+.+.++. ....||.|+||+|++||..++||.+|++||+++
T Consensus 2 ~~Ly~~--------~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~ 73 (73)
T cd03076 2 YTLTYF--------PVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGRK 73 (73)
T ss_pred cEEEEe--------CCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhcC
Confidence 578877 789999999999999999999998862 235699999999999999999999999999864
No 45
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.60 E-value=3.4e-15 Score=100.86 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=57.0
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC-------CCCCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN-------AEYMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~-------~~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
+||.. ..|++|++++++|+++|++|+.+.++. ....||.|+||+|+++|..++||.+|++||++
T Consensus 2 ~Ly~~--------~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 2 KLTYF--------NIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred EEEEE--------cCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 57777 788999999999999999999998873 13469999999999999999999999999974
No 46
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.58 E-value=3e-15 Score=102.43 Aligned_cols=67 Identities=22% Similarity=0.332 Sum_probs=58.4
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC----CCCCCCCCcceEEeC----CEEecChhhHHHHH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA----EYMSPSNRVPFIKVG----QFLVAELDPIVKFT 119 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~----~~~~P~gkvP~L~~~----g~~l~eS~aI~~YL 119 (253)
+++||+. +.||+|+|++.+|+++||+|+.+.++.. ...||.|+||+|+++ |.+|+||.+|++||
T Consensus 1 ~i~Ly~~--------~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~~~~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL 72 (77)
T cd03040 1 KITLYQY--------KTCPFCCKVRAFLDYHGIPYEVVEVNPVSRKEIKWSSYKKVPILRVESGGDGQQLVDSSVIISTL 72 (77)
T ss_pred CEEEEEc--------CCCHHHHHHHHHHHHCCCceEEEECCchhHHHHHHhCCCccCEEEECCCCCccEEEcHHHHHHHH
Confidence 3678988 8899999999999999999999988631 134899999999975 78999999999999
Q ss_pred hhc
Q psy10805 120 QNK 122 (253)
Q Consensus 120 ~~~ 122 (253)
+++
T Consensus 73 ~~~ 75 (77)
T cd03040 73 KTY 75 (77)
T ss_pred HHH
Confidence 985
No 47
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.58 E-value=4.8e-15 Score=100.40 Aligned_cols=64 Identities=23% Similarity=0.385 Sum_probs=56.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--C-------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--A-------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~-------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||+. +.||+|+|++++|+++|++|+.+.++. . ...||.|+||+|+++|..|+||.+|++||
T Consensus 1 ~~l~~~--------~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL 72 (73)
T cd03047 1 LTIWGR--------RSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYL 72 (73)
T ss_pred CEEEec--------CCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHh
Confidence 368877 899999999999999999999988752 1 13599999999999999999999999998
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 73 ~ 73 (73)
T cd03047 73 A 73 (73)
T ss_pred C
Confidence 5
No 48
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.57 E-value=9.2e-15 Score=98.46 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=54.8
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCCCCcceEEeC-CEEecChhhHHHHH
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPSNRVPFIKVG-QFLVAELDPIVKFT 119 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~gkvP~L~~~-g~~l~eS~aI~~YL 119 (253)
+||.. +.||+|+|++++|+++|++|+.+.++.. ...||.|+||+|+++ |..++||.+|++|+
T Consensus 2 ~ly~~--------~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSF--------RRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEec--------CCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 57777 8999999999999999999999988731 135999999999985 89999999999997
No 49
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.56 E-value=1.1e-14 Score=98.30 Aligned_cols=64 Identities=27% Similarity=0.477 Sum_probs=56.5
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--CC-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--AE-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||.. +.||+|++++++|+++|++|+.+.++. .+ ..||.|+||+|+++|..++||.+|++||
T Consensus 1 ~~Ly~~--------~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl 72 (73)
T cd03056 1 MKLYGF--------PLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYL 72 (73)
T ss_pred CEEEeC--------CCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHh
Confidence 368888 889999999999999999999998862 11 2599999999999999999999999998
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 73 ~ 73 (73)
T cd03056 73 A 73 (73)
T ss_pred C
Confidence 4
No 50
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.56 E-value=1.9e-15 Score=101.53 Aligned_cols=59 Identities=17% Similarity=0.265 Sum_probs=49.4
Q ss_pred CCchHHHHHHHHHhcCCCeEEEecCC---C-------CCCCCCCCcceEEe-CCEEecChhhHHHHHhhc
Q psy10805 64 DNAHCLAVQAYLKMLGLKYTVDFRKN---A-------EYMSPSNRVPFIKV-GQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 64 ~sp~~~kv~~~L~~~gipye~~~~~~---~-------~~~~P~gkvP~L~~-~g~~l~eS~aI~~YL~~~ 122 (253)
+||+|+|++++|+++|++|+...+.. . ...||.|+||+|++ +|.+++||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999887731 1 12489999999998 789999999999999874
No 51
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.56 E-value=1.2e-14 Score=100.51 Aligned_cols=66 Identities=26% Similarity=0.381 Sum_probs=56.9
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCC--CC-------CCCCCCCcceEEeC---CEEecChhhHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKN--AE-------YMSPSNRVPFIKVG---QFLVAELDPIV 116 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~--~~-------~~~P~gkvP~L~~~---g~~l~eS~aI~ 116 (253)
++||+. +. |+|+|++++|+++|++|+.+.++. .. ..||.|+||+|+++ |..|+||.+|+
T Consensus 2 ~~Ly~~--------~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~ 72 (81)
T cd03048 2 ITLYTH--------GT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAIL 72 (81)
T ss_pred eEEEeC--------CC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHH
Confidence 467876 64 999999999999999999988862 11 35999999999997 78999999999
Q ss_pred HHHhhcC
Q psy10805 117 KFTQNKN 123 (253)
Q Consensus 117 ~YL~~~~ 123 (253)
+||++++
T Consensus 73 ~yL~~~~ 79 (81)
T cd03048 73 LYLAEKY 79 (81)
T ss_pred HHHHHHh
Confidence 9999875
No 52
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.55 E-value=1.1e-14 Score=102.56 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=60.0
Q ss_pred CCCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC------CCCCCCCCcceEEeC-CEEecChhhHHH
Q psy10805 45 WPDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA------EYMSPSNRVPFIKVG-QFLVAELDPIVK 117 (253)
Q Consensus 45 ~~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~------~~~~P~gkvP~L~~~-g~~l~eS~aI~~ 117 (253)
-|..++||+. +.||+|+|++++|+++|++|+.+.++.. ...||.|+||+|+++ |..++||.+|++
T Consensus 15 ~~~~~~Ly~~--------~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~ 86 (89)
T cd03055 15 VPGIIRLYSM--------RFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICE 86 (89)
T ss_pred CCCcEEEEeC--------CCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHH
Confidence 4567899998 9999999999999999999999988731 236999999999986 899999999999
Q ss_pred HHh
Q psy10805 118 FTQ 120 (253)
Q Consensus 118 YL~ 120 (253)
||+
T Consensus 87 yLe 89 (89)
T cd03055 87 YLD 89 (89)
T ss_pred hhC
Confidence 995
No 53
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.55 E-value=8.2e-15 Score=99.19 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=55.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEe-CCEEecChhhHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKV-GQFLVAELDPIVKF 118 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~-~g~~l~eS~aI~~Y 118 (253)
++||+. +.||+|+|++++|+++|++|+.+.++.. ...||.|+||+|++ ||..++||.+|++|
T Consensus 1 ~~Ly~~--------~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~y 72 (74)
T cd03051 1 MKLYDS--------PTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRY 72 (74)
T ss_pred CEEEeC--------CCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHH
Confidence 468888 8999999999999999999999887621 13599999999985 77899999999999
Q ss_pred Hh
Q psy10805 119 TQ 120 (253)
Q Consensus 119 L~ 120 (253)
|+
T Consensus 73 Le 74 (74)
T cd03051 73 LE 74 (74)
T ss_pred hC
Confidence 95
No 54
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.53 E-value=1.8e-14 Score=99.11 Aligned_cols=67 Identities=15% Similarity=0.245 Sum_probs=57.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC---CC-----CCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE---YM-----SPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~---~~-----~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
.+||.. +.|+.|++++++|+++|++||.+.++..+ .. .|.|+||+|++||.+|+||.||++||+
T Consensus 2 ~~Ly~~--------~~~~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~ 73 (79)
T cd03077 2 PVLHYF--------NGRGRMESIRWLLAAAGVEFEEKFIESAEDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIA 73 (79)
T ss_pred CEEEEe--------CCCChHHHHHHHHHHcCCCcEEEEeccHHHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHH
Confidence 367877 78899999999999999999999886311 12 368999999999999999999999999
Q ss_pred hcC
Q psy10805 121 NKN 123 (253)
Q Consensus 121 ~~~ 123 (253)
+++
T Consensus 74 ~~~ 76 (79)
T cd03077 74 GKY 76 (79)
T ss_pred HHc
Confidence 875
No 55
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.53 E-value=2.2e-14 Score=96.92 Aligned_cols=64 Identities=17% Similarity=0.278 Sum_probs=56.1
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
++||.. ..|++|++++++|+++|++|+.+.++.. ...||.|+||+|+++|..++||.||++||
T Consensus 1 ~~L~~~--------~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL 72 (73)
T cd03042 1 MILYSY--------FRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYL 72 (73)
T ss_pred CEEecC--------CCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHh
Confidence 367877 7899999999999999999999888621 12489999999999999999999999998
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 73 ~ 73 (73)
T cd03042 73 D 73 (73)
T ss_pred C
Confidence 5
No 56
>KOG1422|consensus
Probab=99.52 E-value=2.4e-14 Score=112.41 Aligned_cols=169 Identities=17% Similarity=0.166 Sum_probs=111.0
Q ss_pred CCCCCchHHHHHHHHHhcCCCeEEEecCC---C---CCCCCCCCcceEEeCCEEecChhhHHHHHhhcCeeeeccCcchH
Q psy10805 61 LLPDNAHCLAVQAYLKMLGLKYTVDFRKN---A---EYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKNYITWCDPTTYR 134 (253)
Q Consensus 61 ~~~~sp~~~kv~~~L~~~gipye~~~~~~---~---~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~~~~w~~~~~~~ 134 (253)
..-.||+|+++.+.|.++|++|.+..++. + ...+|.|++|+|..++.+++||..|-++|++++ ..+ .+.
T Consensus 17 ~~Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l----~~p-~~~ 91 (221)
T KOG1422|consen 17 SLGDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKL----PPP-KLP 91 (221)
T ss_pred cCCCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhc----CCC-CCc
Confidence 34679999999999999999999988873 1 246899999999999999999999999999996 111 011
Q ss_pred HHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCCCCHHHHHHHHHHHHHHHHhhhCC---CCcccCCCCChhhHHH
Q psy10805 135 EVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEK---NNFFFKDKPTELDALL 211 (253)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~---~~fl~Gd~~t~aD~~~ 211 (253)
.+. +........-.+ ......+... .+...+..+..+-+.|..|+.+|.. ++|+.||++|.||+.+
T Consensus 92 ~~~--------~~E~asag~diF-~kF~~fi~ks--k~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsL 160 (221)
T KOG1422|consen 92 TLA--------PPESASAGSDIF-AKFSAFIKKS--KDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSL 160 (221)
T ss_pred ccC--------CHHHHhhHHHHH-HHHHHHHhCc--hhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhh
Confidence 100 000000000000 0111111100 1112234456677888999999974 7999999999999999
Q ss_pred HHHHHHHhcCCCCChhHHH--HHhcChhHHHHHHHHHhc
Q psy10805 212 FGHIYAVLTTPLPNNRFAS--TIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 212 ~~~l~~~~~~~~~~~~l~~--~l~~~p~L~~~~~ri~~r 248 (253)
.+=|..+..+. ..+++ +-++.++|.+|+..+.+|
T Consensus 161 lPKL~~i~va~---k~yk~~~IP~~lt~V~rYl~~~ya~ 196 (221)
T KOG1422|consen 161 LPKLHHIKVAA---KHYKNFEIPASLTGVWRYLKNAYAR 196 (221)
T ss_pred chhHHHHHHHH---HHhcCCCCchhhhHHHHHHHHHHhH
Confidence 98776543320 01111 225789999999988765
No 57
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.52 E-value=1.9e-14 Score=97.41 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=55.7
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHh--cCCCeEEEecCCC------CCCCCCCCcceEEe-CCEEecChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKM--LGLKYTVDFRKNA------EYMSPSNRVPFIKV-GQFLVAELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~--~gipye~~~~~~~------~~~~P~gkvP~L~~-~g~~l~eS~aI~~YL 119 (253)
++||.. +.||+|+|++++|++ +|++|+.+.++.. ...||.|+||+|++ ||..++||.+|++||
T Consensus 1 ~~Ly~~--------~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yL 72 (73)
T cd03049 1 MKLLYS--------PTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYL 72 (73)
T ss_pred CEEecC--------CCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhh
Confidence 368877 899999999999999 8999999988631 24689999999985 788999999999998
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 73 e 73 (73)
T cd03049 73 D 73 (73)
T ss_pred C
Confidence 5
No 58
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.52 E-value=2.4e-14 Score=97.45 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=56.0
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC--------CCCCCCCCcceEEe-CCEEecChhhHHHHHh
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA--------EYMSPSNRVPFIKV-GQFLVAELDPIVKFTQ 120 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~--------~~~~P~gkvP~L~~-~g~~l~eS~aI~~YL~ 120 (253)
+||.. +.||+|++++++|+++|++|+.+.++.. ...||.|+||+|++ +|.+|+||.||++||+
T Consensus 2 ~Ly~~--------~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~ 73 (75)
T cd03044 2 TLYTY--------PGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVA 73 (75)
T ss_pred eEecC--------CCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHh
Confidence 57777 7899999999999999999999988742 13599999999997 5889999999999998
Q ss_pred h
Q psy10805 121 N 121 (253)
Q Consensus 121 ~ 121 (253)
+
T Consensus 74 ~ 74 (75)
T cd03044 74 N 74 (75)
T ss_pred h
Confidence 6
No 59
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.52 E-value=3e-14 Score=98.67 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=52.9
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCC--------CC-------CCCCCCcceEEeCCEEecChhhHHHHHhhcC
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNA--------EY-------MSPSNRVPFIKVGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~--------~~-------~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~ 123 (253)
..++.|++++++|+++||+|+.+.++.. ++ .+|+|+||+|++||..|+||.||++||++++
T Consensus 7 ~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 7 DIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred CCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 6789999999999999999999988621 11 1299999999999999999999999999874
No 60
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.50 E-value=7.1e-14 Score=94.63 Aligned_cols=58 Identities=19% Similarity=0.212 Sum_probs=52.4
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCC--------CCCCCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNA--------EYMSPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~--------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
..||+|+|++++|+++|++|+.+.++.. ...||.|+||+|+++|.+++||.+|++||+
T Consensus 8 ~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 8 NYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 7899999999999999999999988631 136999999999999999999999999984
No 61
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.49 E-value=8.3e-14 Score=94.87 Aligned_cols=58 Identities=21% Similarity=0.399 Sum_probs=51.5
Q ss_pred chHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeCCEEecChhhHHHHHhhcC
Q psy10805 66 AHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 66 p~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~~~ 123 (253)
++|+|++++|+++|++|+.+.++.. ...||.|+||+|+++|..++||.+|++||+++|
T Consensus 9 ~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~ 75 (76)
T cd03046 9 SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKY 75 (76)
T ss_pred CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhC
Confidence 5799999999999999999887631 236999999999999999999999999999874
No 62
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.48 E-value=1.1e-13 Score=94.57 Aligned_cols=65 Identities=23% Similarity=0.351 Sum_probs=54.5
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCC---------CCCCCCCCcceEEeC-CEEecChhhHHHHH
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNA---------EYMSPSNRVPFIKVG-QFLVAELDPIVKFT 119 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~---------~~~~P~gkvP~L~~~-g~~l~eS~aI~~YL 119 (253)
+||+. +.+ +|+|++++|+++|++|+.+.++.. ...||.|+||+|+++ |..++||.+|++||
T Consensus 2 ~Ly~~--------~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL 72 (77)
T cd03057 2 KLYYS--------PGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYL 72 (77)
T ss_pred EEEeC--------CCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHH
Confidence 57766 444 589999999999999999887631 125999999999987 89999999999999
Q ss_pred hhcC
Q psy10805 120 QNKN 123 (253)
Q Consensus 120 ~~~~ 123 (253)
+++|
T Consensus 73 ~~~~ 76 (77)
T cd03057 73 ADLH 76 (77)
T ss_pred HHhC
Confidence 9875
No 63
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.44 E-value=5.4e-13 Score=88.58 Aligned_cols=63 Identities=27% Similarity=0.424 Sum_probs=55.9
Q ss_pred eeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 50 KLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 50 ~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
+||.. +.||+|+|++++|+++|++|+.+.++... ..+|.+++|+|+++|..+.||.+|++||+
T Consensus 2 ~ly~~--------~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 2 KLYYF--------PGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred EEEeC--------CCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 57777 78999999999999999999999887421 25899999999999999999999999985
No 64
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.37 E-value=2.1e-12 Score=88.11 Aligned_cols=57 Identities=19% Similarity=0.366 Sum_probs=48.3
Q ss_pred CchHHHHHHHHHhcCCCeEEEecCC--CC-------CCCCC-CCcceEEeC-CEEecChhhHHHHHhh
Q psy10805 65 NAHCLAVQAYLKMLGLKYTVDFRKN--AE-------YMSPS-NRVPFIKVG-QFLVAELDPIVKFTQN 121 (253)
Q Consensus 65 sp~~~kv~~~L~~~gipye~~~~~~--~~-------~~~P~-gkvP~L~~~-g~~l~eS~aI~~YL~~ 121 (253)
..+|.+++++|+++|++|+.+.++. .+ ..||. |+||+|+++ |.+|+||.||++||++
T Consensus 9 ~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 9 RGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp STTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 3489999999999999999999873 11 25899 999999999 9999999999999985
No 65
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.8e-11 Score=93.70 Aligned_cols=175 Identities=12% Similarity=0.119 Sum_probs=105.3
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCCCCCC-----CCCcceEE-eCCEEecChhhHHHHHhhcCeeeeccCcchHHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSP-----SNRVPFIK-VGQFLVAELDPIVKFTQNKNYITWCDPTTYREV 136 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P-----~gkvP~L~-~~g~~l~eS~aI~~YL~~~~~~~w~~~~~~~~~ 136 (253)
..||||.|+|+..-.+|||+|.....+.....| ..+||+|+ ++|..+.||..|++|+++............++
T Consensus 7 dHCPfcvrarmi~Gl~nipve~~vL~nDDe~Tp~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~lt~~~~pa- 85 (215)
T COG2999 7 DHCPFCVRARMIFGLKNIPVELHVLLNDDEETPIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKPLLTGKVRPA- 85 (215)
T ss_pred ccChHHHHHHHHhhccCCChhhheeccCcccChhhhhcccccceEEccccccchhhhHHHHHHHHhcCchhhccCcCHH-
Confidence 889999999999999999999888765444445 46899998 47889999999999999975111111111111
Q ss_pred hhhhhcCCC--------CchhHHHhhHHHHHHHHHHh---hhcCcCC-----CCHHHHHHHHHHHHHHHHhhhCCCCccc
Q psy10805 137 TKVRHGAVA--------PWPLNIYLTYKKKLTVQHRL---KTLKWLE-----KSLDQVYKDVDKCCQSLSERLEKNNFFF 200 (253)
Q Consensus 137 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~l~~Le~~L~~~~fl~ 200 (253)
+..|..... |.....-++.+....+.+.+ +....+. ........++...|+.|+.++.+..=+-
T Consensus 86 i~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~~s~~n 165 (215)
T COG2999 86 IEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVGPSAVN 165 (215)
T ss_pred HHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcCcchhc
Confidence 122221110 10000001110000000111 0000111 1245667888999999999887655333
Q ss_pred CCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcCh-hHHHHHHHHHhc
Q psy10805 201 KDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYP-NLVEHCTRIEQT 248 (253)
Q Consensus 201 Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p-~L~~~~~ri~~r 248 (253)
| ..+.-||.+|+.|..+...+ + + ++| .+..|..+|.+.
T Consensus 166 ~-~l~~ddi~vFplLRnlt~v~--g------i-~wps~v~dy~~~msek 204 (215)
T COG2999 166 G-ELSEDDILVFPLLRNLTLVA--G------I-QWPSRVADYRDNMSEK 204 (215)
T ss_pred c-ccchhhhhhhHHhccceecc--c------C-CCcHHHHHHHHHHHHh
Confidence 4 69999999999887654321 1 1 344 688999998764
No 66
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=3.8e-13 Score=109.75 Aligned_cols=206 Identities=17% Similarity=0.198 Sum_probs=125.7
Q ss_pred ecchhhhhhhcceeeeeecCCCCCCCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC---C---------
Q psy10805 22 IGTKKIYMHLLHVVFIFFPAREIWPDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK---N--------- 89 (253)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~---~--------- 89 (253)
.+|.+.+.++++ ||| .-+|||.+...+.+.+++...+++.|- |.+.+.++|-.|....-. .
T Consensus 42 ~~~f~~e~GRYh-LYv--slaCPWAHRTLI~R~LkgLE~~Isvsv----v~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~ 114 (324)
T COG0435 42 TGGFKAEKGRYH-LYV--SLACPWAHRTLIFRALKGLEPVISVSV----VHPLMDENGWTFDPEFPGATGDPLYGIERLS 114 (324)
T ss_pred cCCcCCCCCeEE-EEE--EecCchHHHHHHHHHHhcccccceEEE----ecccccCCCceEcCCCCCCCCCcccchhHHH
Confidence 356777888888 887 347888888877777777777776664 455666666666544110 0
Q ss_pred ------CCCCCCCCCcceEEeCC--E-EecChhhHHHHHhhcCeeeeccCcchHHHhhhhhcCCCCchhHHHhhHH---H
Q psy10805 90 ------AEYMSPSNRVPFIKVGQ--F-LVAELDPIVKFTQNKNYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYK---K 157 (253)
Q Consensus 90 ------~~~~~P~gkvP~L~~~g--~-~l~eS~aI~~YL~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 157 (253)
.+.-+-+-.||||.|.. + +-+||..|++-+...| .++... ..+..|..++.-+... +
T Consensus 115 ~~Y~~adP~YsgRvTVPVLwDk~~~tIVnNES~eIirm~N~aF----------de~~~~-~~dlyP~~Lr~eId~~n~~I 183 (324)
T COG0435 115 QLYTRADPDYSGRVTVPVLWDKKTQTIVNNESAEIIRMFNSAF----------DEFGAS-AVDLYPEALRTEIDELNKWI 183 (324)
T ss_pred HHHhhcCCCCCCceeEEEEEecCCCeeecCCcHHHHHHHHHHH----------HHHhhh-ccccCCHHHHHHHHHHHhhh
Confidence 01123345899999853 3 4579999999998765 111111 0112232222222111 0
Q ss_pred HHHHHHHhhhcCcC--CCCHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhc---CCCCChhHHHHH
Q psy10805 158 KLTVQHRLKTLKWL--EKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLT---TPLPNNRFASTI 232 (253)
Q Consensus 158 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~---~~~~~~~l~~~l 232 (253)
...+...++..|+. +..-++....+.+.|+.||..|+++.|++||++|.||+-+|+.|.++-. ..++++ + .-+
T Consensus 184 y~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN-~-~rI 261 (324)
T COG0435 184 YDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCN-L-RRI 261 (324)
T ss_pred cccccCceeeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecc-c-chh
Confidence 11122223333321 1123445566778899999999999999999999999999998755321 112222 1 235
Q ss_pred hcChhHHHHHHHHHh
Q psy10805 233 RAYPNLVEHCTRIEQ 247 (253)
Q Consensus 233 ~~~p~L~~~~~ri~~ 247 (253)
.+||||..|+..+.+
T Consensus 262 ~dypnL~~yLr~LYq 276 (324)
T COG0435 262 RDYPNLWGYLRDLYQ 276 (324)
T ss_pred hcCchHHHHHHHHhc
Confidence 679999999998866
No 67
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.26 E-value=3.7e-11 Score=84.16 Aligned_cols=70 Identities=46% Similarity=0.836 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHH
Q psy10805 177 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 246 (253)
Q Consensus 177 ~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~ 246 (253)
+..+++.+.++.+|+.|++++|++|+++|+|||++++.+..+.....+.......++.+|+|.+|++||.
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 4567789999999999999999999999999999999987765432222223335678999999999984
No 68
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.25 E-value=1.6e-11 Score=81.98 Aligned_cols=66 Identities=21% Similarity=0.393 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTR 244 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~r 244 (253)
.++..+.+.+.|+.||.+|++++||+|++||+||+++++++..+...... ....+.+|+|.+|++|
T Consensus 4 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~----~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 4 VERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPD----FDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHT----CCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcC----cCccccCHHHHHHHhC
Confidence 35667888999999999999999999999999999999999887765321 1235899999999987
No 69
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=99.24 E-value=3.9e-11 Score=80.41 Aligned_cols=62 Identities=31% Similarity=0.482 Sum_probs=57.7
Q ss_pred cccCCCCCchHHHHHHHHHhcCCC---eEEEecCCCCCCCCCCCcceEEe-CCEEecChhhHHHHHh
Q psy10805 58 EQILLPDNAHCLAVQAYLKMLGLK---YTVDFRKNAEYMSPSNRVPFIKV-GQFLVAELDPIVKFTQ 120 (253)
Q Consensus 58 ~~~~~~~sp~~~kv~~~L~~~gip---ye~~~~~~~~~~~P~gkvP~L~~-~g~~l~eS~aI~~YL~ 120 (253)
..++++++|.|+++.++|+..+.| |+++..++ ++++|+|++|+|.+ +++.+.+-..|++||.
T Consensus 7 ~~glpsid~ecLa~~~yl~~~~~~~~~~~vv~s~n-~~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL~ 72 (72)
T PF10568_consen 7 DWGLPSIDPECLAVIAYLKFAGAPEQQFKVVPSNN-PWLSPTGELPALIDSGGTWVSGFRNIVEYLR 72 (72)
T ss_pred CCCCCccCHHHHHHHHHHHhCCCCCceEEEEEcCC-CCcCCCCCCCEEEECCCcEEECHHHHHHhhC
Confidence 456789999999999999999999 99999987 68999999999999 8999999999999984
No 70
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.19 E-value=7.4e-11 Score=83.61 Aligned_cols=69 Identities=19% Similarity=0.249 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.++....+.+.|+.+|+.|++++|++||++|+||+++++.+.++...... .. .+++|+|.+|.+||.+|
T Consensus 26 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~--~~---~~~~P~l~~w~~~~~~~ 94 (95)
T PF00043_consen 26 VEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPD--FL---FEKFPKLKKWYERMFAR 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTT--TT---HTTSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCC--cc---cccCHHHHHHHHHHHcC
Confidence 45566778889999999999999999999999999999998877654321 11 37999999999999986
No 71
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.10 E-value=2.4e-10 Score=81.89 Aligned_cols=64 Identities=31% Similarity=0.496 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCC--cccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHH-hcChhHHHHHHHHHh
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTI-RAYPNLVEHCTRIEQ 247 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~--fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l-~~~p~L~~~~~ri~~ 247 (253)
.+...+++.+.+..++..|+++. ||+|++||+||+++|++|..+.+. .+ +.+|||.+|++||++
T Consensus 33 ~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~---------~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 33 GDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA---------DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC---------HHTTTCHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc---------ccccccHHHHHHHHhhcC
Confidence 45667788999999999998877 999999999999999998766542 12 589999999999974
No 72
>KOG2903|consensus
Probab=99.08 E-value=5.6e-11 Score=96.33 Aligned_cols=143 Identities=15% Similarity=0.135 Sum_probs=82.4
Q ss_pred CcceEEeCC---EEecChhhHHHHHhhcCeeeeccCcchHHHhhhhhcCCCCchhHHHhhHH---HHHHHHHHhhhcCcC
Q psy10805 98 RVPFIKVGQ---FLVAELDPIVKFTQNKNYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYK---KKLTVQHRLKTLKWL 171 (253)
Q Consensus 98 kvP~L~~~g---~~l~eS~aI~~YL~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 171 (253)
.||||.|-. .+-.||..|++.+...| ......+ +....+..|..++..+... +...+...++..|+.
T Consensus 123 TVPVLWD~k~ktIVnNES~eIIr~fNs~f-~ef~~~~------e~~~lDL~P~~L~~~Ide~N~wvy~~INNGVYk~GFA 195 (319)
T KOG2903|consen 123 TVPVLWDLKTKTIVNNESSEIIRMFNSAF-DEFNGIA------ENPVLDLYPSSLRAQIDETNSWVYDKINNGVYKCGFA 195 (319)
T ss_pred EEEEEEccccceeecCchHHHHHHHhhhh-hhhhccc------cCCccccCCHHHHHHHhhhhceecccccCceeeeccc
Confidence 799999843 35579999999998544 1111100 0011122222222211100 001111223333331
Q ss_pred --CCCHHHHHHHHHHHHHHHHhhhCCCC--cccCCCCChhhHHHHHHHHHHhcC---CCCChhHHHHHhcChhHHHHHHH
Q psy10805 172 --EKSLDQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLFGHIYAVLTT---PLPNNRFASTIRAYPNLVEHCTR 244 (253)
Q Consensus 172 --~~~~~~~~~~~~~~l~~Le~~L~~~~--fl~Gd~~t~aD~~~~~~l~~~~~~---~~~~~~l~~~l~~~p~L~~~~~r 244 (253)
+..-++....+-+.|+.+|..|+++. |++|+++|.||+.+|..+.++-.. .++++ .+.+.++||+|..|..+
T Consensus 196 ~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn-~~~ir~~Yp~l~~~lk~ 274 (319)
T KOG2903|consen 196 EKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCN-KKTIRDEYPNLHNWLKN 274 (319)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecc-hhhhhccCcHHHHHHHH
Confidence 12234555667788999999999876 999999999999999876543211 12222 23334599999999999
Q ss_pred HHhc
Q psy10805 245 IEQT 248 (253)
Q Consensus 245 i~~r 248 (253)
+-.+
T Consensus 275 iY~~ 278 (319)
T KOG2903|consen 275 IYWN 278 (319)
T ss_pred HHhh
Confidence 8764
No 73
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=99.07 E-value=6.2e-10 Score=87.22 Aligned_cols=115 Identities=28% Similarity=0.460 Sum_probs=85.8
Q ss_pred HHHHhhcC-----eeeeccCcchHHHhhhhhcCCCCchhHHHhhHHHHHHHHHHhhhcCcCC---------C--------
Q psy10805 116 VKFTQNKN-----YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLE---------K-------- 173 (253)
Q Consensus 116 ~~YL~~~~-----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-------- 173 (253)
+.||+++. +..|++..||.+++|++|...+|||++..+|..+++.+..++...|.+. .
T Consensus 3 ~s~l~~~l~~l~~y~lyv~~~Ny~~~Tr~~~~~~lpfP~~y~~P~~~r~~a~~r~~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (168)
T PF11801_consen 3 ISFLESKLQPLLDYSLYVDSKNYEEVTRPAFSKLLPFPLNYNLPPRLRNQAKERLEHLGLSSLDTDEEEEEEEEDEEAEE 82 (168)
T ss_pred HHHHHHHHHHHHHHHHHhCchhHHHHhHHHHHhhCCCchhhcCCHHHHHHHHHHHHHhCCCcccchhhccccccccchhh
Confidence 45666653 6789999999999999999999999999999888887777655444310 0
Q ss_pred -----------CH--------HHH---HHHHHHHHHHHHhhhCCC---CcccCCC-CChhhHHHHHHHHHHhcCCCCChh
Q psy10805 174 -----------SL--------DQV---YKDVDKCCQSLSERLEKN---NFFFKDK-PTELDALLFGHIYAVLTTPLPNNR 227 (253)
Q Consensus 174 -----------~~--------~~~---~~~~~~~l~~Le~~L~~~---~fl~Gd~-~t~aD~~~~~~l~~~~~~~~~~~~ 227 (253)
.. .+. .+...+++..|++.|++. +|++|+. +|.+||.+|++|..+....+|+..
T Consensus 83 ~~~~~~~S~~~~~~~~~k~~~k~~lr~~~~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p~LP~~~ 162 (168)
T PF11801_consen 83 AASQIPQSKLHKKQETAKSKQKEQLRLSKLAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVPELPDPF 162 (168)
T ss_pred hcccCCCccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcccCCcHH
Confidence 00 001 112457888999999988 9999997 999999999999998866666544
Q ss_pred HHH
Q psy10805 228 FAS 230 (253)
Q Consensus 228 l~~ 230 (253)
+++
T Consensus 163 l~~ 165 (168)
T PF11801_consen 163 LRD 165 (168)
T ss_pred HHH
Confidence 443
No 74
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.05 E-value=8.1e-10 Score=79.22 Aligned_cols=67 Identities=18% Similarity=0.286 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.++...++.+.++.+|++|++++|++|+++|+||+++++.+....... ..++++|+|.+|++||.++
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~-------~~~~~~p~l~~~~~~~~~~ 97 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGG-------VDLEDYPAIRRWLARIEAL 97 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccC-------CChhhCcHHHHHHHHHHhC
Confidence 455677889999999999999999999999999999988875432211 1246899999999999876
No 75
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.05 E-value=6e-10 Score=82.35 Aligned_cols=65 Identities=28% Similarity=0.379 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 177 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 177 ~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.....+.+.|+.||.+|++++|++||++|+||+++++.+..+.... . .+..+|+|.+|++||.+|
T Consensus 54 ~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~-----~--~~~~~p~l~~w~~~~~~~ 118 (119)
T cd03189 54 FINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARG-----P--LLEKYPNIAAYLERIEAR 118 (119)
T ss_pred HHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcC-----c--ccccCchHHHHHHHHhcC
Confidence 3456788999999999999999999999999999988776654321 1 257899999999999876
No 76
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.05 E-value=7.4e-10 Score=80.49 Aligned_cols=66 Identities=18% Similarity=0.160 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+...+.+.+.|+.||++|++++|++|+++|+||+++++.+....... ..+..+|+|.+|+++|.+|
T Consensus 42 ~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~-------~~~~~~p~l~~~~~~~~~~ 107 (110)
T cd03180 42 AASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELP-------IERPPLPHLERWYARLRAR 107 (110)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcc-------cccccCchHHHHHHHHHhC
Confidence 44567789999999999998999999999999999988875433221 1247899999999999986
No 77
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.04 E-value=1.1e-09 Score=80.70 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+.....+.+.++.||++|++++|++|+++|+|||++++.+..+...+. ...++.+|+|.+|+++|.+|
T Consensus 44 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~-----~~~~~~~p~l~~~~~~~~~~ 111 (118)
T cd03187 44 EENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATPF-----AKLFDSRPHVKAWWEDISAR 111 (118)
T ss_pred HHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHccc-----hhhhhcCchHHHHHHHHHhC
Confidence 345567889999999999999999999999999999988766542211 12356899999999999986
No 78
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.02 E-value=8.3e-10 Score=82.50 Aligned_cols=68 Identities=13% Similarity=0.181 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHh
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 247 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~ 247 (253)
.+...+.+++.|+.||++|++++|++||+||+||+++++++....... .. ..++++|+|.+|++||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~----~~-~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS----PF-PLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC----cc-cccccCChHHHHHHHHhc
Confidence 466778889999999999999999999999999999999987765421 01 134789999999999975
No 79
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.02 E-value=1.3e-09 Score=79.74 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+.....+.+.++.||+.|++++||+|+++|+|||++++.+..+...+. .++++|+|.+|++||.++
T Consensus 42 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 107 (114)
T cd03188 42 AAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGL-------DLSDWPNLAAYLARVAAR 107 (114)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCC-------ChhhChHHHHHHHHHHhC
Confidence 345667889999999999989999999999999999988766543211 145899999999999876
No 80
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.02 E-value=9e-10 Score=79.89 Aligned_cols=68 Identities=10% Similarity=0.180 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+...+.+.+.|..||.+|++++|++|+++|+|||++++.+..+...+. +....+|+|.+|+++|.+|
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~r 100 (107)
T cd03186 33 AEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGI------ELPKQAKPLKDYMERVFAR 100 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCC------CCcccchHHHHHHHHHHCC
Confidence 4456677889999999999999999999999999999988754432221 1124799999999999886
No 81
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.01 E-value=7.9e-10 Score=81.51 Aligned_cols=71 Identities=17% Similarity=0.268 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 174 SLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 174 ~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
..+...+.+.+.++.||++|++++|++||++|+||+++++.+..+..... . ...+.++|+|.+|++||.+|
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~--~--~~~~~~~P~L~~w~~r~~~r 108 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDP--K--WFDQSPYPRLRRWLNGFLAS 108 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhh--c--ccCcccCHHHHHHHHHHHcC
Confidence 46667788999999999999999999999999999999987655432110 0 11247899999999999986
No 82
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.00 E-value=1.5e-09 Score=79.20 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCCC----------CcccCCCCChhhHHHHHHHHHHhcCCCCChhHHH-HHhcChhHHHHHH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKN----------NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAS-TIRAYPNLVEHCT 243 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~----------~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~-~l~~~p~L~~~~~ 243 (253)
.+....++.+.|+.||.+|+++ +||+|+++|+||+++++.+.++...+++ ... ....+|+|.+|++
T Consensus 27 i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~---~~~~~~~~~P~l~~w~~ 103 (111)
T cd03204 27 LKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLS---RRYWGNGKRPNLEAYFE 103 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCcc---ccccccccChHHHHHHH
Confidence 3556677889999999999765 4999999999999999988776543321 000 1357999999999
Q ss_pred HHHhc
Q psy10805 244 RIEQT 248 (253)
Q Consensus 244 ri~~r 248 (253)
||.+|
T Consensus 104 rv~aR 108 (111)
T cd03204 104 RVLQR 108 (111)
T ss_pred HHHcC
Confidence 99987
No 83
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.00 E-value=1.8e-09 Score=79.82 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhc-CCCCChhHHHHHhcChhHHHHHHHHHhcc
Q psy10805 174 SLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLT-TPLPNNRFASTIRAYPNLVEHCTRIEQTY 249 (253)
Q Consensus 174 ~~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~-~~~~~~~l~~~l~~~p~L~~~~~ri~~r~ 249 (253)
..+....++.+.|+.||+.|++++|++|+++|+||+++++.+..+.. ... .+..+|+|.+|++||.++-
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~p 104 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPL-------DLSKYPNVRAWLERLKALP 104 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCC-------ChhhCchHHHHHHHHHccc
Confidence 35567778899999999999988999999999999999988876643 221 1357999999999999873
No 84
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.98 E-value=1.6e-09 Score=80.51 Aligned_cols=67 Identities=22% Similarity=0.279 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+.....+.+.+..||++|++++||+|+++|+||+++++.+..+.... ...+..+|+|.+|++||.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~------~~~~~~~P~l~~~~~rv~~~ 100 (121)
T cd03209 34 PDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFE------PDCLDAFPNLKDFLERFEAL 100 (121)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhC------ccccccChHHHHHHHHHHHC
Confidence 34456678899999999998999999999999999998876654321 11357899999999999875
No 85
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.96 E-value=1.9e-09 Score=77.59 Aligned_cols=66 Identities=17% Similarity=0.158 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+....++.+.++.||.+|++++|++|+++|+||+++++.+..+.... .+..+|+|.+|++||.+|
T Consensus 28 ~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~--------~~~~~p~l~~w~~~~~~~ 93 (103)
T cd03207 28 RMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG--------LLPERPAFDAYIARITDR 93 (103)
T ss_pred hhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC--------CCCCChHHHHHHHHHHcC
Confidence 344567789999999999999999999999999999988876654321 136799999999999876
No 86
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.95 E-value=2.2e-09 Score=79.05 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.++....+.+.|+.||++|++++|++||++|+||+++++.+..+...+. +....+|+|.+|+++|.+|
T Consensus 47 ~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 114 (117)
T cd03182 47 GERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKL------RVPEELTHLRAWYDRMAAR 114 (117)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCC------CCccccHHHHHHHHHHHhc
Confidence 3456677889999999999988999999999999999988876544321 1235799999999999886
No 87
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.93 E-value=4.1e-09 Score=78.37 Aligned_cols=70 Identities=13% Similarity=0.181 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHH--HHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAS--TIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~-~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~--~l~~~p~L~~~~~ri~~r 248 (253)
++..+.+.+.|..||..|++ ++||+||++|+||+++++.+..+... .. .... ..+.+|+|.+|++||.+|
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~-~~--~~~~~~~~~~~P~l~~w~~rl~~r 101 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIA-LG--HYKNWSVPESLTSVKSYMKALFSR 101 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHH-HH--HhcCCCCcccchHHHHHHHHHHCC
Confidence 55667788999999999985 79999999999999999876555321 00 0000 136899999999999876
No 88
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=98.93 E-value=2.6e-09 Score=81.72 Aligned_cols=74 Identities=24% Similarity=0.345 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhH-HHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRF-ASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l-~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.....+.+.|+.||++|++++|++|+++|+||+++++.+..+.......... ...+..+|+|.+|++||.++
T Consensus 35 ~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 35 YDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 455667889999999999999999999999999999998876542210000000 11246899999999999875
No 89
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.92 E-value=3.7e-09 Score=79.56 Aligned_cols=73 Identities=18% Similarity=0.128 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhhhCC----------------CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEK----------------NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNL 238 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~----------------~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L 238 (253)
.+.....+.+.|+.|+.+|++ ++|++|+++|+|||++++.+..+..+......+ ....++|+|
T Consensus 27 ~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~-~i~~~~P~L 105 (134)
T cd03198 27 NENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNF-EIPADLTGL 105 (134)
T ss_pred hHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CccccCHHH
Confidence 456677889999999999986 689999999999999999876542210000000 113789999
Q ss_pred HHHHHHHHhc
Q psy10805 239 VEHCTRIEQT 248 (253)
Q Consensus 239 ~~~~~ri~~r 248 (253)
.+|++||.+|
T Consensus 106 ~aw~~ri~aR 115 (134)
T cd03198 106 WRYLKNAYQR 115 (134)
T ss_pred HHHHHHHHCC
Confidence 9999999887
No 90
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.91 E-value=5.5e-09 Score=78.22 Aligned_cols=67 Identities=24% Similarity=0.318 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHhhhCC---CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEK---NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~---~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+.....+.+.|..||+.|++ ++||+|+++|+||++++..+..+.... ...+..+|+|.+|++||.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~------~~~~~~~P~l~~~~~rv~~~ 103 (126)
T cd03210 34 DDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLA------PGCLDAFPLLKAFVERLSAR 103 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhC------hHhhhcChHHHHHHHHHHhC
Confidence 34455678899999999974 589999999999999998876654321 12367899999999999875
No 91
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=98.90 E-value=3.2e-09 Score=77.62 Aligned_cols=68 Identities=15% Similarity=0.292 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.....+.+.++.+|+.|++++|++|+++|+||+++++++........ ...+.+|+|.+|+++|.++
T Consensus 38 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 105 (113)
T cd03178 38 IERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGI------DDLDDFPNVKRWLDRIAAR 105 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccc------cchhhchHHHHHHHHHhhC
Confidence 3456677889999999999989999999999999999988876644321 1256899999999999886
No 92
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.90 E-value=4.5e-09 Score=74.55 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 245 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri 245 (253)
.+...+.+.+.++.||++|++++|++|+++|+||+++++++.++...... ....+.+|+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~----~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 34 LEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPL----LGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhh----hhhhccCccHHHHHHhC
Confidence 34556778999999999999999999999999999999998876543211 11357899999999985
No 93
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.89 E-value=6.6e-09 Score=74.81 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHH
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 246 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~ 246 (253)
+....++.+.++.||..|++++|++|+++|+||+++++.+..+..... + +..+|+|.+|++|+.
T Consensus 42 ~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~------~-~~~~p~l~~~~~~~~ 105 (105)
T cd03179 42 AFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGF------D-LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCC------C-hHhCccHHHHHHhhC
Confidence 455677888999999999988999999999999999988776543221 1 467999999999974
No 94
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=98.88 E-value=8.3e-09 Score=77.05 Aligned_cols=67 Identities=13% Similarity=0.201 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHhh-hCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSER-LEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~-L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+...+.+.+.++.+|++ +++++|++||++|+||+++++.+........ +.++.+|+|.+|++||.++
T Consensus 44 ~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 111 (126)
T cd03183 44 KKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY------DVFEGRPKLAAWRKRVKEA 111 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC------cccccCchHHHHHHHHHHh
Confidence 34556788999999987 5557999999999999999887755543221 1247899999999999983
No 95
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.88 E-value=7.4e-09 Score=71.02 Aligned_cols=67 Identities=21% Similarity=0.350 Sum_probs=58.7
Q ss_pred CCCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 46 PDDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 46 ~~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
+..++||.. +.||+|.+++.+|+..||+|+.+.++... ..++..+||++..||..+.++..|.+||
T Consensus 7 ~~~V~ly~~--------~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l 78 (79)
T TIGR02190 7 PESVVVFTK--------PGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYL 78 (79)
T ss_pred CCCEEEEEC--------CCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHh
Confidence 468999999 99999999999999999999999987421 1256789999999999999999999998
Q ss_pred h
Q psy10805 120 Q 120 (253)
Q Consensus 120 ~ 120 (253)
+
T Consensus 79 ~ 79 (79)
T TIGR02190 79 A 79 (79)
T ss_pred C
Confidence 5
No 96
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=98.87 E-value=7.7e-09 Score=76.77 Aligned_cols=70 Identities=19% Similarity=0.329 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+...+.+.+.|+.||+.|++++|++|+++|+||+++++.+..+..... . ...+..+|+|.+|++|+.++
T Consensus 38 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~-~---~~~~~~~p~l~~w~~~~~~~ 107 (123)
T cd03181 38 VEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVF-D---KEWRAKYPNVTRWFNTVVNQ 107 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHc-C---HHHHHhChHHHHHHHHHHcC
Confidence 3456677889999999999999999999999999999988776532211 1 12357899999999999865
No 97
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.87 E-value=7.3e-09 Score=76.80 Aligned_cols=63 Identities=19% Similarity=0.296 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 179 YKDVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 179 ~~~~~~~l~~Le~~L~--~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.+.+.|..||++|+ +++||+|+++|+||+++++.+..+....+ .+..+|+|.+|++||.+|
T Consensus 46 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 110 (121)
T cd03191 46 RHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGV-------DLSPYPTIARINEACLEL 110 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCC-------CcccCcHHHHHHHHHHhC
Confidence 3557889999999997 45899999999999999988765543221 146899999999999876
No 98
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.86 E-value=6.4e-09 Score=77.58 Aligned_cols=74 Identities=16% Similarity=0.294 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 174 SLDQVYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 174 ~~~~~~~~~~~~l~~Le~~L~~--~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
..++..+.+.+.|+.||..|++ ++||+|+++|+||+++++++..+....... .....++.+|+|.+|++||.++
T Consensus 29 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~w~~r~~~~ 104 (124)
T cd03184 29 DREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLL-GYEFPLDRFPKLKKWMDAMKED 104 (124)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhc-cccCCcccChHHHHHHHHhccC
Confidence 3456778889999999999975 899999999999999998876654321000 0001247899999999999875
No 99
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.85 E-value=9.6e-09 Score=78.11 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhhhC--CCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 181 DVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 181 ~~~~~l~~Le~~L~--~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.+.|+.||+.|+ +++|++|+++|+||++++..+..+.... ...+..+|+|.+|++||.++
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~------~~~l~~~P~l~~~~~rv~~~ 106 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELD------PSLLSDFPLLQAFKTRISNL 106 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhc------hhhhccChHHHHHHHHHHcC
Confidence 45788999999998 6789999999999999998876654321 12357899999999999875
No 100
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.85 E-value=9.1e-09 Score=73.28 Aligned_cols=58 Identities=16% Similarity=0.171 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHh
Q psy10805 180 KDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 247 (253)
Q Consensus 180 ~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~ 247 (253)
.+..+.++.||++|++++|++|+++|+|||++++.+... .. ....+|+|.+|++||.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~---~~-------~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT---GL-------ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc---cc-------ccccChHHHHHHHHHHh
Confidence 445678889999999999999999999999998776431 11 12579999999999986
No 101
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=98.84 E-value=1.6e-08 Score=75.36 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCC-CCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTP-LPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~-~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.....+.+.++.||++|++++|++|+++|+||+++++.+..+.... ..+... ...+.+|+|.+|+++|.+|
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~-~~~~~~p~l~~w~~~~~~~ 106 (126)
T cd03185 33 REKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKL-LDEEKTPLLAAWAERFLEL 106 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccc-cCcccCchHHHHHHHHHhc
Confidence 445667888999999999998999999999999999998776643210 000000 0136799999999999875
No 102
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.77 E-value=1.7e-08 Score=72.72 Aligned_cols=64 Identities=20% Similarity=0.333 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhhhCC--CCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHH
Q psy10805 177 QVYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 245 (253)
Q Consensus 177 ~~~~~~~~~l~~Le~~L~~--~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri 245 (253)
.....+.+.++.||++|++ ++|++|+++|+||+++++++..+.... ... .+..+|+|.+|++||
T Consensus 39 ~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~---~~~--~~~~~p~l~~~~~~~ 104 (104)
T cd03192 39 FLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLD---PKL--LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhC---chh--hHHhChhHHHHHHhC
Confidence 3456678899999999987 899999999999999999887664321 101 267899999999985
No 103
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.68 E-value=9.1e-08 Score=64.27 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=56.0
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCC------CCCCCCcceEEeCCEEecChhhHHHHHh
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEY------MSPSNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~------~~P~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
.+++|.. +.||+|.+++.+|...|++|+.+.++.... .+....||++..||..+.++..|.+||+
T Consensus 2 ~v~lys~--------~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTK--------PGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEEC--------CCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 5788988 999999999999999999999999874221 1455689999999999999999999985
No 104
>PRK10638 glutaredoxin 3; Provisional
Probab=98.66 E-value=7e-08 Score=66.76 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=56.5
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
+++++|.. +.||+|.+++.+|+++|++|+.+.++... ..+|.++||+|..||..+.....+..+-
T Consensus 2 ~~v~ly~~--------~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~ 73 (83)
T PRK10638 2 ANVEIYTK--------ATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALD 73 (83)
T ss_pred CcEEEEEC--------CCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHH
Confidence 36889988 89999999999999999999999997421 2478899999999999999888777765
Q ss_pred hh
Q psy10805 120 QN 121 (253)
Q Consensus 120 ~~ 121 (253)
.+
T Consensus 74 ~~ 75 (83)
T PRK10638 74 AR 75 (83)
T ss_pred Hc
Confidence 43
No 105
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.64 E-value=6.5e-08 Score=71.78 Aligned_cols=64 Identities=16% Similarity=0.228 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhC---CCCcccCCCCChhhHHHHHHHHHHhcC--CCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 181 DVDKCCQSLSERLE---KNNFFFKDKPTELDALLFGHIYAVLTT--PLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 181 ~~~~~l~~Le~~L~---~~~fl~Gd~~t~aD~~~~~~l~~~~~~--~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
++.+.++.||+.|+ +++|++| ++|+||+++++.+..+... ...+ . +..+++|+|.+|++||.+|
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~--~-~~~~~~P~l~~W~~~~~~r 102 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFN--Y-DITEGRPNLAAWIEEMNKI 102 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcC--c-cccccCcHHHHHHHHHhcc
Confidence 44667777877776 5899999 9999999999887644210 0000 1 1236899999999999876
No 106
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.61 E-value=1.2e-07 Score=72.13 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+.+++.+.+..+ ...++++|++|++||+||+++|+.+..+.... .+. .+.++|+|.+|++||++.
T Consensus 81 r~~L~~a~~~w~~---~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~----~~~-Dl~~~p~I~~W~eRm~~~ 146 (149)
T cd03197 81 REWLYDALNTWVA---ALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP----AFK-DMVEETKIGEWYERMDAA 146 (149)
T ss_pred HHHHHHHHHHHHH---HhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc----ccc-chhhCcCHHHHHHHHHHH
Confidence 3444444444433 33445789999999999999999987776531 111 256899999999999874
No 107
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.60 E-value=1.5e-07 Score=69.24 Aligned_cols=65 Identities=14% Similarity=0.019 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHHHHHHhhhC-CCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 174 SLDQVYKDVDKCCQSLSERLE-KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 174 ~~~~~~~~~~~~l~~Le~~L~-~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
..+...+.+.+.+..+|.+|+ +++||+| ++|+||+++++.+.+....++. + . |++.+|++||.+|
T Consensus 39 ~~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~-------l-~-p~l~ay~~r~~~r 104 (114)
T cd03195 39 LSEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDP-------V-P-ERLRDYARRQWQR 104 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCC-------C-C-HHHHHHHHHHHCC
Confidence 345667778899999999995 5589999 5999999999888766544321 2 2 8999999999887
No 108
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.57 E-value=2.7e-07 Score=67.81 Aligned_cols=63 Identities=19% Similarity=0.167 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhhh---CCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERL---EKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L---~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
+...+.+.+.++.+|..+ ++++|++|| +|+||+++++.+......+. ...|+|.+|++||.+|
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~---------~~~P~l~~~~~rv~~r 105 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGL---------PLSPAAQAYVDALLAH 105 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCC---------CCCHHHHHHHHHHHCC
Confidence 444455556666666555 567899999 99999999988766543221 1239999999999875
No 109
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.53 E-value=2.8e-07 Score=65.71 Aligned_cols=64 Identities=16% Similarity=0.112 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 245 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri 245 (253)
.+.....+.+.|+.+|++|++++| +++|+||+++++.+........ . .....++|+|.+|++||
T Consensus 35 ~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~-~---~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 35 LERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHP-D---LDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHcc-C---cchhhhChHHHHHHHhC
Confidence 455677889999999999998898 8999999999988866543211 1 11247899999999986
No 110
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.39 E-value=8.9e-07 Score=60.90 Aligned_cols=55 Identities=13% Similarity=0.279 Sum_probs=46.0
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC------CCCCCCCcceEEeCCEEec
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE------YMSPSNRVPFIKVGQFLVA 110 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~------~~~P~gkvP~L~~~g~~l~ 110 (253)
.+++|.. +.||+|.+++.+|+++||+|+.+.++..+ ..++..+||+++.++..+.
T Consensus 2 ~v~lYt~--------~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~~~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTR--------NDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGFRQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeC--------CCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCCCcCEEEECCEEEe
Confidence 4788988 99999999999999999999999997422 2357889999999886554
No 111
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.37 E-value=9e-07 Score=59.55 Aligned_cols=61 Identities=26% Similarity=0.281 Sum_probs=50.5
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIV 116 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~ 116 (253)
+++||.. +.||+|.+++.+|+.+||+|+.+.+.... ..++.+.+|++..+|..+..-..+.
T Consensus 2 ~v~ly~~--------~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 2 RVTIYSR--------LGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred EEEEEec--------CCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHH
Confidence 5788988 89999999999999999999999987411 2468899999999999887654443
No 112
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.28 E-value=2.9e-06 Score=56.49 Aligned_cols=63 Identities=19% Similarity=0.336 Sum_probs=51.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEe--cChhhHHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLV--AELDPIVKFT 119 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l--~eS~aI~~YL 119 (253)
+++|.. +.||+|.+++.+|+.+|++|+.+.++... ..++.+.||+|..+|..+ .++..|.++|
T Consensus 2 i~lf~~--------~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTT--------PWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcC--------CCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 578888 89999999999999999999999886421 136788999999998877 5666776665
No 113
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.26 E-value=2.6e-06 Score=56.32 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=52.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
+++|.. +.||+|.+++.+|+.+|++|+.+.+.... ..++..++|++..+|..+.++..|.+.
T Consensus 2 v~ly~~--------~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSK--------STCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEEC--------CCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 567877 88999999999999999999999886421 236888999999999999998877653
No 114
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.18 E-value=4e-06 Score=55.70 Aligned_cols=55 Identities=20% Similarity=0.364 Sum_probs=45.9
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAE 111 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~e 111 (253)
+++|+. +.||+|.+++.+|+++|++|+.+.++... ..+|.+++|+|.++|..+.+
T Consensus 2 v~l~~~--------~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~i~~~~~~i~g 63 (73)
T cd02976 2 VTVYTK--------PDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYRSVPVVVIGDEHLSG 63 (73)
T ss_pred EEEEeC--------CCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCcccCEEEECCEEEec
Confidence 577877 88999999999999999999999987311 24688999999999877654
No 115
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=1.9e-05 Score=54.07 Aligned_cols=63 Identities=22% Similarity=0.286 Sum_probs=50.1
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC---------CCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE---------YMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~---------~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
.+++|.. +.||||.++.-+|..+|++|+.+.++..+ ..++..+||++..||..+.....+-++
T Consensus 2 ~v~iyt~--------~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 2 NVTIYTK--------PGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred CEEEEEC--------CCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHHH
Confidence 4678887 88999999999999999999999887422 124788999999999877654444444
No 116
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.11 E-value=1.2e-05 Score=54.07 Aligned_cols=64 Identities=22% Similarity=0.360 Sum_probs=51.7
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCC-CcceEEeCCEEecChhhHHHHHh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSN-RVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~g-kvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
+++|.. +.||+|.+++.+|+.+||+|+.+.++... ...... .||++..+|..+.+...+.++-.
T Consensus 2 i~ly~~--------~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTK--------PNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeC--------CCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 678888 89999999999999999999999987411 012333 89999999999998888877643
No 117
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.01 E-value=1.7e-05 Score=54.02 Aligned_cols=65 Identities=23% Similarity=0.311 Sum_probs=52.7
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
|++|.. +.||+|.+++.+|+.+|++|+.+.++..+ ..+....||++..+|..+.+...+..+-++
T Consensus 1 v~ly~~--------~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTK--------PYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEec--------CCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 457777 89999999999999999999999987411 124567899999999999888777776554
No 118
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.97 E-value=5.3e-05 Score=54.14 Aligned_cols=65 Identities=23% Similarity=0.328 Sum_probs=53.9
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC----------CCCCCCCcceEEeCCEEecChhhHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE----------YMSPSNRVPFIKVGQFLVAELDPIV 116 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~----------~~~P~gkvP~L~~~g~~l~eS~aI~ 116 (253)
+++++|.. +.||+|.++.-+|+..|++|+.++++..+ ..+....||.+..+|..+.....+.
T Consensus 8 ~~Vvvysk--------~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~ 79 (99)
T TIGR02189 8 KAVVIFSR--------SSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVM 79 (99)
T ss_pred CCEEEEEC--------CCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHH
Confidence 57899988 99999999999999999999999997421 1246679999999999998876666
Q ss_pred HHH
Q psy10805 117 KFT 119 (253)
Q Consensus 117 ~YL 119 (253)
...
T Consensus 80 ~l~ 82 (99)
T TIGR02189 80 ALH 82 (99)
T ss_pred HHH
Confidence 643
No 119
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.92 E-value=3.5e-05 Score=51.88 Aligned_cols=64 Identities=17% Similarity=0.185 Sum_probs=48.9
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCC-CCCCcceEEe-CCEEecCh--hhHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMS-PSNRVPFIKV-GQFLVAEL--DPIVK 117 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~-P~gkvP~L~~-~g~~l~eS--~aI~~ 117 (253)
+++|.. +.||+|++++.+|+..|++|+.+.++... ..+ +.+.||+++. +|..+.++ .-|..
T Consensus 2 v~ly~~--------~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~ 73 (77)
T TIGR02200 2 ITVYGT--------TWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKA 73 (77)
T ss_pred EEEEEC--------CCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHH
Confidence 567877 89999999999999999999999887421 123 7889999974 67777654 35555
Q ss_pred HHh
Q psy10805 118 FTQ 120 (253)
Q Consensus 118 YL~ 120 (253)
+|.
T Consensus 74 ~l~ 76 (77)
T TIGR02200 74 KLQ 76 (77)
T ss_pred Hhh
Confidence 553
No 120
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.91 E-value=2.5e-05 Score=52.26 Aligned_cols=51 Identities=14% Similarity=0.188 Sum_probs=41.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC------CCCCCCCcceEEeCCE
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE------YMSPSNRVPFIKVGQF 107 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~------~~~P~gkvP~L~~~g~ 107 (253)
+++|.. +.||+|.+++-+|+++||+|+.+.++..+ ...+...||+++.+|.
T Consensus 1 v~ly~~--------~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSK--------NNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred CEEEeC--------CCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCcccCEEEECCC
Confidence 467877 89999999999999999999999987411 1245668999998654
No 121
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=97.89 E-value=8e-05 Score=51.52 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=55.6
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHh-----cCCCeEEEecCCCC-------CCC--CCCCcceEEeCCEEecChh
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKM-----LGLKYTVDFRKNAE-------YMS--PSNRVPFIKVGQFLVAELD 113 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~-----~gipye~~~~~~~~-------~~~--P~gkvP~L~~~g~~l~eS~ 113 (253)
.+++|.. +.||+|.+++-+|+. .|++|+.+.++... ... +.-.||++..||+.+.+..
T Consensus 2 ~v~iy~~--------~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg~~ 73 (85)
T PRK11200 2 FVVIFGR--------PGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGGCT 73 (85)
T ss_pred EEEEEeC--------CCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcCHH
Confidence 4678888 899999999999999 89999999887311 011 2357999999999999999
Q ss_pred hHHHHHhhcC
Q psy10805 114 PIVKFTQNKN 123 (253)
Q Consensus 114 aI~~YL~~~~ 123 (253)
.|.+++.+.+
T Consensus 74 ~~~~~~~~~~ 83 (85)
T PRK11200 74 DFEAYVKENL 83 (85)
T ss_pred HHHHHHHHhc
Confidence 9999998763
No 122
>PHA03050 glutaredoxin; Provisional
Probab=97.84 E-value=0.00012 Score=53.16 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=51.6
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCC---CeEEEecCCCC----------CCCCCCCcceEEeCCEEecChh
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGL---KYTVDFRKNAE----------YMSPSNRVPFIKVGQFLVAELD 113 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gi---pye~~~~~~~~----------~~~P~gkvP~L~~~g~~l~eS~ 113 (253)
+.+++|.. +.||||.++.-+|+..|+ +|+.++++... ..+....||.+..||+.+....
T Consensus 13 ~~V~vys~--------~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~d 84 (108)
T PHA03050 13 NKVTIFVK--------FTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYS 84 (108)
T ss_pred CCEEEEEC--------CCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChH
Confidence 57899998 999999999999999999 89999987411 1245568999999999888766
Q ss_pred hHHH
Q psy10805 114 PIVK 117 (253)
Q Consensus 114 aI~~ 117 (253)
.+..
T Consensus 85 dl~~ 88 (108)
T PHA03050 85 DLLE 88 (108)
T ss_pred HHHH
Confidence 6555
No 123
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.80 E-value=0.00012 Score=50.90 Aligned_cols=67 Identities=15% Similarity=0.209 Sum_probs=53.1
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhc-----CCCeEEEecCCCC-------CC--CCCCCcceEEeCCEEecChhh
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKML-----GLKYTVDFRKNAE-------YM--SPSNRVPFIKVGQFLVAELDP 114 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~-----gipye~~~~~~~~-------~~--~P~gkvP~L~~~g~~l~eS~a 114 (253)
+++|.. +.||+|.+++-+|+.+ +++|+.+.++... .. .....||++..||..+.++..
T Consensus 2 V~vys~--------~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~d 73 (86)
T TIGR02183 2 VVIFGR--------PGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTD 73 (86)
T ss_pred EEEEeC--------CCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHH
Confidence 467877 8999999999999998 4678888776210 01 123589999999999999999
Q ss_pred HHHHHhhcC
Q psy10805 115 IVKFTQNKN 123 (253)
Q Consensus 115 I~~YL~~~~ 123 (253)
|.+++.+++
T Consensus 74 l~~~~~~~~ 82 (86)
T TIGR02183 74 FEQLVKENF 82 (86)
T ss_pred HHHHHHhcc
Confidence 999998864
No 124
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.73 E-value=2.8e-05 Score=50.02 Aligned_cols=53 Identities=21% Similarity=0.333 Sum_probs=43.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEe
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLV 109 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l 109 (253)
|++|.. +.||+|.+++-+|+.+|++|+.+.++..+ ..+....+|++..||+.+
T Consensus 1 V~vy~~--------~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTK--------PGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEES--------TTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEc--------CCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCCccCEEEECCEEC
Confidence 457777 89999999999999999999999997421 124667999999998754
No 125
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=97.73 E-value=0.00021 Score=48.73 Aligned_cols=66 Identities=20% Similarity=0.294 Sum_probs=54.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCC----------CCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEY----------MSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~----------~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
+++|.. +.||+|.+++-+|+..+++|+.+.++.... .+..-.+|++..+|..+.++..|.++
T Consensus 2 v~~y~~--------~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~ 73 (82)
T cd03419 2 VVVFSK--------SYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMAL 73 (82)
T ss_pred EEEEEc--------CCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHH
Confidence 567777 899999999999999999999988873211 23456899999999999999999988
Q ss_pred Hhhc
Q psy10805 119 TQNK 122 (253)
Q Consensus 119 L~~~ 122 (253)
..+-
T Consensus 74 ~~~g 77 (82)
T cd03419 74 HKSG 77 (82)
T ss_pred HHcC
Confidence 7653
No 126
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.50 E-value=0.0007 Score=46.24 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=48.8
Q ss_pred CCCchHHHHHHHHHhcCCC--eEEEecCCCCC----------CCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 63 PDNAHCLAVQAYLKMLGLK--YTVDFRKNAEY----------MSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gip--ye~~~~~~~~~----------~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
+.||+|.+++-+|+..+++ |+.+.++.... ......+|.+..+|..+.++..+.++..+
T Consensus 7 ~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 7 SYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 8999999999999999999 99988874211 13445899999999999999888887765
No 127
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.38 E-value=0.00081 Score=47.05 Aligned_cols=57 Identities=21% Similarity=0.155 Sum_probs=46.4
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
+.||+|.+++-+|+..|++|+.+.+.... ..+...+||.+..+|..+.+...+.+.-
T Consensus 21 ~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 21 PRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 68999999999999999999999986311 1245568999999999998887777644
No 128
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.35 E-value=0.00067 Score=48.22 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=51.4
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFT 119 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL 119 (253)
+++.+|.. + ....+.||+|.++.-+|+.+||+|+.+.+.... ..+....||.+..+|..+.....+.+..
T Consensus 12 ~~Vvvf~k--g-~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 12 NPVVLYMK--G-TPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred CCEEEEEc--c-CCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHH
Confidence 57777732 0 012268999999999999999999999885311 1245569999999999888776666543
No 129
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=96.94 E-value=0.0033 Score=56.49 Aligned_cols=63 Identities=16% Similarity=0.261 Sum_probs=51.1
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCC---------------CCCCCCcceEEeCCEEecC
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEY---------------MSPSNRVPFIKVGQFLVAE 111 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~---------------~~P~gkvP~L~~~g~~l~e 111 (253)
+.|++|.. +.||+|.++.-+|+.+||+|+.+.++..+. .+....||++..||..+.+
T Consensus 2 ~~V~vys~--------~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igG 73 (410)
T PRK12759 2 VEVRIYTK--------TNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGG 73 (410)
T ss_pred CcEEEEeC--------CCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCCCccCeEEECCEEEeC
Confidence 46889988 999999999999999999999999974211 1345689999999998877
Q ss_pred hhhHHH
Q psy10805 112 LDPIVK 117 (253)
Q Consensus 112 S~aI~~ 117 (253)
-..+..
T Consensus 74 f~~l~~ 79 (410)
T PRK12759 74 YDNLMA 79 (410)
T ss_pred chHHHH
Confidence 666655
No 130
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=96.81 E-value=0.0099 Score=43.02 Aligned_cols=68 Identities=16% Similarity=0.078 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCC-CCcccCCCCChhhHHHHHHHHHHhcCCCCC-hhHHHHH---hcChhHHHHHH
Q psy10805 175 LDQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPN-NRFASTI---RAYPNLVEHCT 243 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~-~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~-~~l~~~l---~~~p~L~~~~~ 243 (253)
.++....+++.+...+.+|++ ++||||+ +|+||..+...+.++...+.+- ..+.+.. -..|.+.+|+.
T Consensus 41 s~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 41 SEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDPVPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp -HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT----HHHHHHHHHHHT-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCHHHHHHHH
Confidence 456667778888888888865 6999996 9999999999888876432211 1122211 24566776664
No 131
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.55 E-value=0.015 Score=43.56 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 175 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 175 ~~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.++..++++..|..||.++.......| ++|+-||.+|+.|..+.... + +.=-|+|.+|+++|.++
T Consensus 57 t~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk--g------i~~P~~V~~Y~~~~s~~ 121 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK--G------IQWPPKVRAYMDRMSKA 121 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT--T------S---HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc--C------CcCCHHHHHHHHHHHHH
Confidence 467788899999999999986666555 89999999999998775432 1 22237899999999875
No 132
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=96.54 E-value=0.018 Score=44.09 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=49.1
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCC-------CC----CCCCCcceEEeCCEEecChhhHHH
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YM----SPSNRVPFIKVGQFLVAELDPIVK 117 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~----~P~gkvP~L~~~g~~l~eS~aI~~ 117 (253)
|+||... ..++-..+|+|.+++.+|+.+||+|+.+.++... .. .....||.+..+|..|.....+.+
T Consensus 2 VvlYtts--l~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 2 VVLYTTS--LRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred EEEEEcC--CcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHH
Confidence 5667661 0111137999999999999999999999986310 01 123689999999999988777766
Q ss_pred H
Q psy10805 118 F 118 (253)
Q Consensus 118 Y 118 (253)
.
T Consensus 80 L 80 (147)
T cd03031 80 L 80 (147)
T ss_pred H
Confidence 3
No 133
>KOG1752|consensus
Probab=96.48 E-value=0.023 Score=40.75 Aligned_cols=65 Identities=15% Similarity=0.265 Sum_probs=52.6
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCC----------CCCCCCcceEEeCCEEecChhhHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEY----------MSPSNRVPFIKVGQFLVAELDPIV 116 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~----------~~P~gkvP~L~~~g~~l~eS~aI~ 116 (253)
+.+.+|.. +.||+|.++..+|...|+++.+++++..++ ..-..+||.+..+|+.+.....+.
T Consensus 14 ~~VVifSK--------s~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~ 85 (104)
T KOG1752|consen 14 NPVVIFSK--------SSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLM 85 (104)
T ss_pred CCEEEEEC--------CcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHH
Confidence 57788877 999999999999999999999999984221 123449999999999998777776
Q ss_pred HHH
Q psy10805 117 KFT 119 (253)
Q Consensus 117 ~YL 119 (253)
.+=
T Consensus 86 ~lh 88 (104)
T KOG1752|consen 86 ALH 88 (104)
T ss_pred HHH
Confidence 654
No 134
>PRK10824 glutaredoxin-4; Provisional
Probab=96.38 E-value=0.013 Score=42.95 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=47.3
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
+.||||.++.-+|...|++|+.+.+.... ..+-...||-+..+|+.+..+..+.....+
T Consensus 28 p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 28 PSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQR 93 (115)
T ss_pred CCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHHHC
Confidence 68999999999999999999998886311 124567999999999999888777665443
No 135
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.08 E-value=0.0082 Score=43.71 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=29.5
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.||+|.|++-+|+.+|++|+.+.+.
T Consensus 1 i~iY~~--------~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEY--------PKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEEC--------CCCHHHHHHHHHHHHcCCceEEeccc
Confidence 468888 99999999999999999999999885
No 136
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.00 E-value=0.0095 Score=42.80 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=29.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.||+|.+++-+|+.+|++|+.+.+.
T Consensus 1 i~iY~~--------~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGN--------PNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEEC--------CCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 468888 89999999999999999999999885
No 137
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=95.36 E-value=0.022 Score=42.82 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=29.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.||+|.|++-+|+.+||+|+.+.+.
T Consensus 2 i~iY~~--------~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTS--------PSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeC--------CCChHHHHHHHHHHHcCCCcEEeecc
Confidence 578888 99999999999999999999999875
No 138
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.34 E-value=0.024 Score=41.46 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.5
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
++++|+. +-|+-|+|++-+|++.|++|+.+.+.
T Consensus 1 ~i~iy~~--------p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 1 DIIFYEK--------PGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred CEEEEEC--------CCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 5789999 89999999999999999999999875
No 139
>PTZ00062 glutaredoxin; Provisional
Probab=95.30 E-value=0.056 Score=43.75 Aligned_cols=56 Identities=23% Similarity=0.134 Sum_probs=45.0
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
+.||+|.++.-+|+..||+|+.+.+...+ ..+-...||.+..+|+.+.....+.+.
T Consensus 126 p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 126 PFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred CCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 68999999999999999999998886311 124456899999999998877666663
No 140
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=95.26 E-value=0.093 Score=39.06 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHhc
Q psy10805 176 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQT 248 (253)
Q Consensus 176 ~~~~~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~r 248 (253)
.+..++++..|..|+.++..... .+..+|+-||.+|+.|..+.... -+.=-|+|.+|+++|.++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vk--------gi~~P~~V~~Y~~~~s~~ 122 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVK--------GLVFPPKVKAYLERMSAL 122 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhc--------CCCCCHHHHHHHHHHHHH
Confidence 46778889999999999854444 45589999999999987654321 122236899999999875
No 141
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=95.20 E-value=0.029 Score=41.06 Aligned_cols=32 Identities=19% Similarity=0.385 Sum_probs=29.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.|+.|.+++-+|+.+||+|+.+.+.
T Consensus 2 i~iY~~--------~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTS--------PSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeC--------CCCHHHHHHHHHHHHCCCceEEEecC
Confidence 568888 89999999999999999999999875
No 142
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=95.13 E-value=0.032 Score=40.96 Aligned_cols=32 Identities=22% Similarity=0.479 Sum_probs=29.1
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.||+|.+++-+|+..||+|+.+.+.
T Consensus 1 i~iY~~--------~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGS--------PNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeC--------CCCHHHHHHHHHHHHcCCceEEEecC
Confidence 468888 89999999999999999999999875
No 143
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=95.05 E-value=0.064 Score=34.74 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=39.1
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhc-----CCCeEEEecCCCCC---CCCCCCcceEEeCCEEec
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKML-----GLKYTVDFRKNAEY---MSPSNRVPFIKVGQFLVA 110 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~-----gipye~~~~~~~~~---~~P~gkvP~L~~~g~~l~ 110 (253)
++++|.. +.||+|.++.-+|++. +++|..+.++..+. ......+|++..+|+.++
T Consensus 2 ~v~~f~~--------~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~~~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVS--------PTCPYCPDAVQAANRIAALNPNISAEMIDAAEFPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEEC--------CCCCCcHHHHHHHHHHHHhCCceEEEEEEcccCHhHHHHcCCcccCEEEECCEEEE
Confidence 3567777 8899999999998865 67787777653211 122347999999987654
No 144
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=94.51 E-value=0.058 Score=38.83 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=29.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.|+.|++++-+|++.|++|+.+.+.
T Consensus 1 i~iy~~--------~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGI--------KNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeC--------CCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 468888 89999999999999999999999875
No 145
>PRK12559 transcriptional regulator Spx; Provisional
Probab=94.40 E-value=0.061 Score=40.39 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=29.5
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.|+.|+++.-+|+.+||+|+.+.+.
T Consensus 2 i~iY~~--------~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 2 VVLYTT--------ASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred EEEEeC--------CCChHHHHHHHHHHHcCCCeEEEEee
Confidence 568888 89999999999999999999999875
No 146
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=94.13 E-value=0.077 Score=39.87 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=29.6
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +.|+.|++++-+|+..||+|+.+.+.
T Consensus 2 i~iY~~--------~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTI--------SSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeC--------CCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 578888 89999999999999999999999885
No 147
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=91.99 E-value=0.22 Score=37.04 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=29.9
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
.+++|+. +-|.-|+|.+-+|+++||+|+.+.+.
T Consensus 2 ~i~iY~~--------p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEK--------PGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeC--------CCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 4678988 88999999999999999999999874
No 148
>PRK10026 arsenate reductase; Provisional
Probab=91.86 E-value=0.24 Score=37.59 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=30.9
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
..+++|+. +-|.-|+|.+-+|++.|++|+++.+-
T Consensus 2 ~~i~iY~~--------p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 2 SNITIYHN--------PACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CEEEEEeC--------CCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 36789999 89999999999999999999999874
No 149
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=91.68 E-value=0.27 Score=35.71 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=29.0
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +-|.-|+|++-+|++.|++|+.+.+.
T Consensus 1 i~iy~~--------~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHN--------PRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEEC--------CCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 468888 89999999999999999999998874
No 150
>PRK10853 putative reductase; Provisional
Probab=91.54 E-value=0.27 Score=36.16 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=29.2
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +-|.-|+|.+-+|++.|++|+.+.+.
T Consensus 2 i~iy~~--------~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGI--------KNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcC--------CCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 578888 89999999999999999999999874
No 151
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=91.52 E-value=0.28 Score=36.04 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=29.6
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
.+++|+. +-|.-|+|++..|+..||+|+.+.+.
T Consensus 2 ~itiy~~--------p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGN--------PNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeC--------CCChHHHHHHHHHHHcCCCcEEEEee
Confidence 3688998 88999999999999999999988764
No 152
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=91.37 E-value=0.31 Score=35.57 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=29.0
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+++|+. +-|+-|+|.+.+|+..|++|+.+.+.
T Consensus 1 i~iy~~--------~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHN--------PRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEEC--------CCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 468888 89999999999999999999998875
No 153
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=90.01 E-value=0.27 Score=32.93 Aligned_cols=49 Identities=16% Similarity=0.155 Sum_probs=33.5
Q ss_pred CCCchHHHHHH----HHHhcCCCeEEEecCCCCCC--CCCCCcceEEeCCEEecC
Q psy10805 63 PDNAHCLAVQA----YLKMLGLKYTVDFRKNAEYM--SPSNRVPFIKVGQFLVAE 111 (253)
Q Consensus 63 ~~sp~~~kv~~----~L~~~gipye~~~~~~~~~~--~P~gkvP~L~~~g~~l~e 111 (253)
+.||+|.++.. ++...|+.++.+.+..++.. .---.+|+|..||+..+.
T Consensus 8 ~~C~~C~~~~~~~~~~~~~~~i~~ei~~~~~~~~~~~ygv~~vPalvIng~~~~~ 62 (76)
T PF13192_consen 8 PGCPYCPELVQLLKEAAEELGIEVEIIDIEDFEEIEKYGVMSVPALVINGKVVFV 62 (76)
T ss_dssp SSCTTHHHHHHHHHHHHHHTTEEEEEEETTTHHHHHHTT-SSSSEEEETTEEEEE
T ss_pred CCCCCcHHHHHHHHHHHHhcCCeEEEEEccCHHHHHHcCCCCCCEEEECCEEEEE
Confidence 44999986665 55667888988887542222 234589999999986554
No 154
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=89.64 E-value=2.1 Score=29.89 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhcCCCeEEEecCCCC-------CC----CCCCCcceEEeCCEEecChhhHHH
Q psy10805 67 HCLAVQAYLKMLGLKYTVDFRKNAE-------YM----SPSNRVPFIKVGQFLVAELDPIVK 117 (253)
Q Consensus 67 ~~~kv~~~L~~~gipye~~~~~~~~-------~~----~P~gkvP~L~~~g~~l~eS~aI~~ 117 (253)
.|.+|..+|+-+||+|+.+.++..+ .. ++...||-+..|+..+.+...+..
T Consensus 18 ~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 18 RQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 6899999999999999999997311 11 245789999999998887655554
No 155
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=88.54 E-value=0.73 Score=30.79 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=35.5
Q ss_pred CCCchHHHH----HHHHHhcCCCeEEEecCCCCCC--CCCCCcceEEeCCEEec
Q psy10805 63 PDNAHCLAV----QAYLKMLGLKYTVDFRKNAEYM--SPSNRVPFIKVGQFLVA 110 (253)
Q Consensus 63 ~~sp~~~kv----~~~L~~~gipye~~~~~~~~~~--~P~gkvP~L~~~g~~l~ 110 (253)
+.||.|..+ .-++++.|++++++.++..... --...+|+|..+|..+.
T Consensus 8 ~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~~~~a~~~~v~~vPti~i~G~~~~ 61 (76)
T TIGR00412 8 TGCANCQMTEKNVKKAVEELGIDAEFEKVTDMNEILEAGVTATPGVAVDGELVI 61 (76)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHcCCCcCCEEEECCEEEE
Confidence 679999998 5678888999999888732111 23458999999887553
No 156
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=88.47 E-value=1.7 Score=28.93 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=29.3
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
-+||+. ..||.|.-...+|+-.+++|+.+++.
T Consensus 4 p~lfgs--------n~Cpdca~a~eyl~rl~v~yd~VeIt 35 (85)
T COG4545 4 PKLFGS--------NLCPDCAPAVEYLERLNVDYDFVEIT 35 (85)
T ss_pred ceeecc--------ccCcchHHHHHHHHHcCCCceeeehh
Confidence 378888 89999999999999999999999986
No 157
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=86.43 E-value=1.7 Score=31.34 Aligned_cols=61 Identities=11% Similarity=0.262 Sum_probs=39.8
Q ss_pred CCCchHHHHHHHHHhc---CCCeEEEecCCCC--C-----C-CCCCCcceEEeC-C-------------EEecChhhHHH
Q psy10805 63 PDNAHCLAVQAYLKML---GLKYTVDFRKNAE--Y-----M-SPSNRVPFIKVG-Q-------------FLVAELDPIVK 117 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~---gipye~~~~~~~~--~-----~-~P~gkvP~L~~~-g-------------~~l~eS~aI~~ 117 (253)
.+||.|..++=+|..- .-..+++.|+... . . --+..+|+|+.+ | ..|.++..|++
T Consensus 22 f~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~ 101 (112)
T PF11287_consen 22 FYCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILR 101 (112)
T ss_pred EECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHH
Confidence 7899999999888632 1223444444210 0 1 125678999853 2 26888999999
Q ss_pred HHhhcC
Q psy10805 118 FTQNKN 123 (253)
Q Consensus 118 YL~~~~ 123 (253)
||+++|
T Consensus 102 ~La~r~ 107 (112)
T PF11287_consen 102 YLAERH 107 (112)
T ss_pred HHHHHc
Confidence 999986
No 158
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=86.09 E-value=1.9 Score=26.02 Aligned_cols=43 Identities=21% Similarity=0.173 Sum_probs=32.1
Q ss_pred CCCchHHHHHHHHH-----hcCCCeEEEecCCCC------CCCCCCCcceEEeC
Q psy10805 63 PDNAHCLAVQAYLK-----MLGLKYTVDFRKNAE------YMSPSNRVPFIKVG 105 (253)
Q Consensus 63 ~~sp~~~kv~~~L~-----~~gipye~~~~~~~~------~~~P~gkvP~L~~~ 105 (253)
..|+.|.++...+. ..++.+..+.++... ...+.+.+|+++..
T Consensus 7 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 60 (69)
T cd01659 7 PWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGVGGVPTLVVF 60 (69)
T ss_pred CCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCCccccEEEEE
Confidence 67899999999998 567777777776321 14577899999863
No 159
>KOG1147|consensus
Probab=83.42 E-value=1 Score=41.41 Aligned_cols=57 Identities=12% Similarity=0.207 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHH---hcChhHHHHHH
Q psy10805 180 KDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTI---RAYPNLVEHCT 243 (253)
Q Consensus 180 ~~~~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l---~~~p~L~~~~~ 243 (253)
.++...+..|+..|.-..||+|.++|+||+++|+.+..--. ....+ ..+-+|.+|++
T Consensus 91 ~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~-------~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGM-------RQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccc-------hHHHHHhhCCchhhhhhcC
Confidence 45567777788888878999999999999999998753211 01122 35677888876
No 160
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=81.27 E-value=1.9 Score=31.03 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=21.4
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecC
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~ 88 (253)
+-|.-|+|++-+|++.|++|+.+.+.
T Consensus 4 ~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 4 PNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78999999999999999999999875
No 161
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=78.70 E-value=1.9 Score=31.72 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEe--CCEEecChhhHHHHHhhcC
Q psy10805 69 LAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKV--GQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 69 ~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~--~g~~l~eS~aI~~YL~~~~ 123 (253)
+|+-+++....=...+. + |....-|-|.+ +|..|.|+.||++||..-|
T Consensus 13 LKlalA~~~~~~~lk~~-v------~ed~~~~~L~~~~~gF~L~e~NAIvrYl~nDF 62 (122)
T PF09635_consen 13 LKLALALEYAQKDLKLE-V------NEDESGPLLKDKKSGFELFEPNAIVRYLANDF 62 (122)
T ss_dssp HHHHHHHHH--STT--E-E-------SS--S--EEE-S--S----HHHHHHHHTT--
T ss_pred HHHHHHHHHhCCCCeee-e------CCccccceeeecCCceEEecccHHHHHHHhhc
Confidence 56666665543333221 1 22234488865 5789999999999999976
No 162
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=78.00 E-value=4.9 Score=27.75 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=37.0
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhc-----CCCeEEEecCCCC---CCCCCCCcceEEeCCEEec
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKML-----GLKYTVDFRKNAE---YMSPSNRVPFIKVGQFLVA 110 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~-----gipye~~~~~~~~---~~~P~gkvP~L~~~g~~l~ 110 (253)
++.++.. +.||+|..+.-+++.. ++.++.+.++... ....--.+|.+..+|..+.
T Consensus 15 ~i~~F~~--------~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVS--------LSCHNCPDVVQALNLMAVLNPNIEHEMIDGALFQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred EEEEEEC--------CCCCCcHHHHHHHHHHHHHCCCceEEEEEhHhCHHHHHHcCCccCCEEEECCEEEE
Confidence 5667766 7899998887776544 6788888776321 1122347999998887554
No 163
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=72.46 E-value=15 Score=24.14 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=32.4
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHh----cCCCeEEEecCCCCC-----CCCCCCcceEEeCCE
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKM----LGLKYTVDFRKNAEY-----MSPSNRVPFIKVGQF 107 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~----~gipye~~~~~~~~~-----~~P~gkvP~L~~~g~ 107 (253)
+++|.. +.||+|.++.-.|+. .+..++...++.... ......+|++..+|.
T Consensus 3 v~~f~~--------~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 3 IELFTS--------PTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEEC--------CCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHHHHHHcCCccCCEEEECCE
Confidence 567777 899999999888753 343355445542111 123347999998775
No 164
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=69.62 E-value=26 Score=24.94 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=49.5
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcC-CCeEEEecCCC-------CCCCCCCCcceEEeCCEEecChhhHHHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLG-LKYTVDFRKNA-------EYMSPSNRVPFIKVGQFLVAELDPIVKF 118 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~g-ipye~~~~~~~-------~~~~P~gkvP~L~~~g~~l~eS~aI~~Y 118 (253)
+++.||= +|. ...|.|-|+.++.-+|...| ++|..+.+-.. ...+---++|=|-.+|..+..|..|.+-
T Consensus 15 n~VvLFM--KGt-p~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em 91 (105)
T COG0278 15 NPVVLFM--KGT-PEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREM 91 (105)
T ss_pred CceEEEe--cCC-CCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHH
Confidence 4566662 221 12378999999999999999 78888776310 0113334789999999999988877775
Q ss_pred Hhh
Q psy10805 119 TQN 121 (253)
Q Consensus 119 L~~ 121 (253)
..+
T Consensus 92 ~q~ 94 (105)
T COG0278 92 YQS 94 (105)
T ss_pred HHc
Confidence 543
No 165
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=63.25 E-value=6.3 Score=25.06 Aligned_cols=26 Identities=31% Similarity=0.376 Sum_probs=19.9
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHh
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKM 77 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~ 77 (253)
+++||+..- .|..|.||.||-.+|..
T Consensus 2 ~mKLYRfiT----GpDDssFChrvta~LN~ 27 (70)
T COG5515 2 KMKLYRFIT----GPDDSSFCHRVTAALNK 27 (70)
T ss_pred cceeeEeec----CCchHHHHHHHHHHHhC
Confidence 567887743 34788999999999974
No 166
>PHA03075 glutaredoxin-like protein; Provisional
Probab=54.89 E-value=34 Score=25.01 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=51.4
Q ss_pred CceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCcceEEeCC-EEecChhhHHHHHhhcC
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYMSPSNRVPFIKVGQ-FLVAELDPIVKFTQNKN 123 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~~P~gkvP~L~~~g-~~l~eS~aI~~YL~~~~ 123 (253)
-+.|++- |.|+-|.-+.-+|+...=.|++.+++-...-+-.|+|=+|..++ ..+. ..|.+||...|
T Consensus 4 tLILfGK--------P~C~vCe~~s~~l~~ledeY~ilrVNIlSfFsK~g~v~~lg~d~~y~lI--nn~~~~lgne~ 70 (123)
T PHA03075 4 TLILFGK--------PLCSVCESISEALKELEDEYDILRVNILSFFSKDGQVKVLGMDKGYTLI--NNFFKHLGNEY 70 (123)
T ss_pred eEEEeCC--------cccHHHHHHHHHHHHhhccccEEEEEeeeeeccCCceEEEecccceehH--HHHHHhhcccE
Confidence 3467777 89999999999999999999999998433456789999998754 3332 36889998776
No 167
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=54.20 E-value=36 Score=22.74 Aligned_cols=50 Identities=14% Similarity=0.313 Sum_probs=31.9
Q ss_pred ceeeccccccccCCCCCchHHHHHHHHHhcC--CCeE--EEecCCCC-CCCC-CCCcceEEeCC
Q psy10805 49 VKLYQPYEVEQILLPDNAHCLAVQAYLKMLG--LKYT--VDFRKNAE-YMSP-SNRVPFIKVGQ 106 (253)
Q Consensus 49 ~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~g--ipye--~~~~~~~~-~~~P-~gkvP~L~~~g 106 (253)
++||+. +.|+-|-.+...|+... .+++ .+.++..+ +..- .-.||||..+|
T Consensus 2 l~l~~k--------~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~~~Y~~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTK--------PGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPELFEKYGYRIPVLHIDG 57 (81)
T ss_dssp EEEEE---------SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHHHHSCTSTSEEEETT
T ss_pred EEEEcC--------CCCChHHHHHHHHHHHHhhcCceEEEEECCCCHHHHHHhcCCCCEEEEcC
Confidence 567877 89999999999999543 3444 44444211 1111 23799999877
No 168
>PHA02125 thioredoxin-like protein
Probab=50.44 E-value=42 Score=21.91 Aligned_cols=41 Identities=20% Similarity=0.123 Sum_probs=27.2
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCCC-----CCCCCCcceEEeC
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAEY-----MSPSNRVPFIKVG 105 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~~-----~~P~gkvP~L~~~ 105 (253)
+.|+.|.++.-.|+. ++++...++.... ..--..+|++..+
T Consensus 8 ~wC~~Ck~~~~~l~~--~~~~~~~vd~~~~~~l~~~~~v~~~PT~~~g 53 (75)
T PHA02125 8 EWCANCKMVKPMLAN--VEYTYVDVDTDEGVELTAKHHIRSLPTLVNT 53 (75)
T ss_pred CCCHhHHHHHHHHHH--HhheEEeeeCCCCHHHHHHcCCceeCeEECC
Confidence 789999999888864 5666666653111 1233578999843
No 169
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=46.94 E-value=26 Score=32.88 Aligned_cols=55 Identities=15% Similarity=0.030 Sum_probs=37.1
Q ss_pred CceeeccccccccCCCCCchHHHHHH----HHHhc-CCCeEEEecCCCCCC---CCCCCcceEEeCCEEec
Q psy10805 48 DVKLYQPYEVEQILLPDNAHCLAVQA----YLKML-GLKYTVDFRKNAEYM---SPSNRVPFIKVGQFLVA 110 (253)
Q Consensus 48 ~~~l~~~~~~~~~~~~~sp~~~kv~~----~L~~~-gipye~~~~~~~~~~---~P~gkvP~L~~~g~~l~ 110 (253)
.+++|-. +.||+|-++.- +..+. +|..+.+.+..++.. -.-..||.+..||..+.
T Consensus 479 ~i~v~~~--------~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~v~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 479 NIKIGVS--------LSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHFPDLKDEYGIMSVPAIVVDDQQVY 541 (555)
T ss_pred EEEEEEC--------CCCCCcHHHHHHHHHHHHhCCCceEEEEECcccHHHHHhCCceecCEEEECCEEEE
Confidence 4666655 77888876554 44455 799999988753322 23457999999887554
No 170
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=46.27 E-value=27 Score=24.76 Aligned_cols=49 Identities=14% Similarity=0.046 Sum_probs=29.5
Q ss_pred hHHHHHHHHHhcCCCeEEEecCCC-------------CCCCC---CCCcceEEeCCEEecChhhH
Q psy10805 67 HCLAVQAYLKMLGLKYTVDFRKNA-------------EYMSP---SNRVPFIKVGQFLVAELDPI 115 (253)
Q Consensus 67 ~~~kv~~~L~~~gipye~~~~~~~-------------~~~~P---~gkvP~L~~~g~~l~eS~aI 115 (253)
.+.++..+|+.++|+|+.+.+... ....| ....|-|..||..+.+-..+
T Consensus 19 ~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdye~f 83 (99)
T PF04908_consen 19 RQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDYEDF 83 (99)
T ss_dssp HHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeHHHH
Confidence 678999999999999999998731 01112 22346788888766553333
No 171
>PF10806 DUF2731: Protein of unknown function (DUF2731); InterPro: IPR021211 This eukaryotic family of proteins has no known function.
Probab=43.62 E-value=45 Score=24.75 Aligned_cols=46 Identities=26% Similarity=0.400 Sum_probs=31.3
Q ss_pred cccCCCCCchHHHHHHHHHhcC---CCeEEEecCC---------CCCCCCCCCcceEE
Q psy10805 58 EQILLPDNAHCLAVQAYLKMLG---LKYTVDFRKN---------AEYMSPSNRVPFIK 103 (253)
Q Consensus 58 ~~~~~~~sp~~~kv~~~L~~~g---ipye~~~~~~---------~~~~~P~gkvP~L~ 103 (253)
....++..|.|+.++++|-.|+ +|=+...... ..+.+|..++|+|+
T Consensus 67 ~~~~L~tDP~~L~~qL~Lc~KN~LkLP~~~~~~~~~~~~~i~~lS~~aspd~~LPiLI 124 (125)
T PF10806_consen 67 TGVILPTDPWCLFAQLILCHKNGLKLPTQEDNSSSKSQHSIIVLSYLASPDNSLPILI 124 (125)
T ss_pred CCeEecCChHHHHHHHHHhhhcCCcCCCcccCCCCCCCccEEEEccccCCCCcCCEee
Confidence 3467789999999999998776 4441111110 12568999999997
No 172
>KOG1668|consensus
Probab=42.28 E-value=19 Score=29.60 Aligned_cols=54 Identities=13% Similarity=0.196 Sum_probs=38.7
Q ss_pred HHHHHHHHhhhCCCCcccCCCCChhhHHHHHHHHHHhcCCCCChhHHHHHhcChhHHHHHHHHHh
Q psy10805 183 DKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 247 (253)
Q Consensus 183 ~~~l~~Le~~L~~~~fl~Gd~~t~aD~~~~~~l~~~~~~~~~~~~l~~~l~~~p~L~~~~~ri~~ 247 (253)
...+..++..|.++.|.-|.+++-.|+.+|+-+. ..+ . -..++|..+|+.++.+
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~---~ep-----~---s~~~v~~~~w~~~l~a 63 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG---VEP-----Q---SARLVNAERWYSKLEA 63 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc---cCc-----c---hhhhhHHHHHHHHHHH
Confidence 4567788889999999999999999999887542 111 0 1345666777766654
No 173
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=39.11 E-value=39 Score=22.70 Aligned_cols=23 Identities=13% Similarity=0.041 Sum_probs=20.5
Q ss_pred chHHHHHHHHHhcCCCeEEEecC
Q psy10805 66 AHCLAVQAYLKMLGLKYTVDFRK 88 (253)
Q Consensus 66 p~~~kv~~~L~~~gipye~~~~~ 88 (253)
-|++|+.-.|+..|++||..+..
T Consensus 16 GF~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 16 GFGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred cHHHHHHHHHHHcCCCEeeecCC
Confidence 48999999999999999998754
No 174
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=34.07 E-value=60 Score=18.58 Aligned_cols=25 Identities=12% Similarity=0.333 Sum_probs=19.9
Q ss_pred CCCcceEEeCCEEecChhhHHHHHh
Q psy10805 96 SNRVPFIKVGQFLVAELDPIVKFTQ 120 (253)
Q Consensus 96 ~gkvP~L~~~g~~l~eS~aI~~YL~ 120 (253)
.|.+|....|+..+.....|.+|++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 4788887777778888888888875
No 175
>PF12728 HTH_17: Helix-turn-helix domain
Probab=25.19 E-value=1.1e+02 Score=18.07 Aligned_cols=27 Identities=11% Similarity=0.318 Sum_probs=21.4
Q ss_pred CCCcceEEeCCEEecChhhHHHHHhhc
Q psy10805 96 SNRVPFIKVGQFLVAELDPIVKFTQNK 122 (253)
Q Consensus 96 ~gkvP~L~~~g~~l~eS~aI~~YL~~~ 122 (253)
.|.+|....|+.....-..|.+|++++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 578888887787888888898888764
No 176
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=23.16 E-value=1.4e+02 Score=22.72 Aligned_cols=69 Identities=14% Similarity=0.249 Sum_probs=47.6
Q ss_pred CCceeeccccccccCCCCCchHHHHHHHHHhcCCCeEEEecCCCCCC-----CC--CCCcceEEeCCEEec---ChhhHH
Q psy10805 47 DDVKLYQPYEVEQILLPDNAHCLAVQAYLKMLGLKYTVDFRKNAEYM-----SP--SNRVPFIKVGQFLVA---ELDPIV 116 (253)
Q Consensus 47 ~~~~l~~~~~~~~~~~~~sp~~~kv~~~L~~~gipye~~~~~~~~~~-----~P--~gkvP~L~~~g~~l~---eS~aI~ 116 (253)
..+..|.. +.|-+|..+.-.|+.+|.....+..++.... -| .+.-=+.+.+|..+- --.+|.
T Consensus 26 ~~~~vyks--------PnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVPa~aI~ 97 (149)
T COG3019 26 TEMVVYKS--------PNCGCCDEWAQHMKANGFEVKVVETDDFLALKRRLGIPYEMQSCHTAVINGYYVEGHVPAEAIA 97 (149)
T ss_pred eeEEEEeC--------CCCccHHHHHHHHHhCCcEEEEeecCcHHHHHHhcCCChhhccccEEEEcCEEEeccCCHHHHH
Confidence 57788888 8899999999999999998888877642110 01 233334455665442 256899
Q ss_pred HHHhhcC
Q psy10805 117 KFTQNKN 123 (253)
Q Consensus 117 ~YL~~~~ 123 (253)
+.|+++.
T Consensus 98 ~ll~~~p 104 (149)
T COG3019 98 RLLAEKP 104 (149)
T ss_pred HHHhCCC
Confidence 9998873
No 177
>KOG0911|consensus
Probab=21.03 E-value=2.4e+02 Score=23.28 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=44.1
Q ss_pred CCCchHHHHHHHHHhcCCCeEEEecCCCC-------CCCCCCCcceEEeCCEEecChhhHHHHHhh
Q psy10805 63 PDNAHCLAVQAYLKMLGLKYTVDFRKNAE-------YMSPSNRVPFIKVGQFLVAELDPIVKFTQN 121 (253)
Q Consensus 63 ~~sp~~~kv~~~L~~~gipye~~~~~~~~-------~~~P~gkvP~L~~~g~~l~eS~aI~~YL~~ 121 (253)
+-|-+++++.-.|+..|++|+...+-..+ ..|---+.|=|-.+|.-+.+...|.+-+.+
T Consensus 152 P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m~~~ 217 (227)
T KOG0911|consen 152 PKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEMHEK 217 (227)
T ss_pred ccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCCCccceeECCEeccCcHHHHHHhhc
Confidence 67889999999999999999998874211 123345788898899888877666655543
No 178
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=20.76 E-value=99 Score=22.20 Aligned_cols=25 Identities=8% Similarity=0.126 Sum_probs=20.7
Q ss_pred cceEE-eCCEEecChhhHHHHHhhcC
Q psy10805 99 VPFIK-VGQFLVAELDPIVKFTQNKN 123 (253)
Q Consensus 99 vP~L~-~~g~~l~eS~aI~~YL~~~~ 123 (253)
+|.+. .+|.+++.|..|+++..+++
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H 27 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRH 27 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcch
Confidence 35554 58899999999999999986
Done!