Query psy10806
Match_columns 178
No_of_seqs 166 out of 1467
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 18:57:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10806.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10806hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 2.2E-37 7.6E-42 255.4 15.5 148 1-157 126-273 (340)
2 3gd8_A Aquaporin-4; proton exc 100.0 3E-37 1E-41 243.5 14.0 146 1-155 78-223 (223)
3 2b6o_A Aquaporin-0, lens fiber 100.0 3.5E-37 1.2E-41 248.4 14.6 148 1-157 80-227 (263)
4 2zz9_A Aquaporin-4; water tran 100.0 3.3E-37 1.1E-41 252.0 13.6 147 1-156 87-233 (301)
5 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.2E-37 1.1E-41 248.8 13.4 150 1-159 82-232 (266)
6 1ldf_A Glycerol uptake facilit 100.0 7.8E-38 2.7E-42 254.5 9.7 160 1-160 80-262 (281)
7 2w2e_A AQY1, aquaporin, aquapo 100.0 6.8E-36 2.3E-40 242.4 16.0 147 1-160 124-271 (279)
8 2o9g_A Aquaporin Z; integral m 100.0 3.4E-36 1.2E-40 239.1 13.8 152 1-155 78-232 (234)
9 1j4n_A Aquaporin 1; membrane p 100.0 8.6E-37 2.9E-41 247.1 10.3 148 1-157 90-237 (271)
10 3cn5_A Aquaporin; membrane pro 100.0 1.4E-36 4.9E-41 248.7 9.8 148 1-156 136-290 (304)
11 3llq_A Aquaporin Z 2; aquapori 100.0 2.5E-35 8.7E-40 236.1 14.6 149 1-153 103-253 (256)
12 2f2b_A Aquaporin AQPM; protein 100.0 1.9E-34 6.5E-39 230.6 14.2 146 1-154 94-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 9.3E-35 3.2E-39 233.8 8.3 153 1-158 82-247 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.7 3.9E-17 1.3E-21 131.4 11.5 102 55-156 7-111 (263)
15 3d9s_A Aquaporin-5, AQP-5; aqu 99.6 4.2E-16 1.4E-20 125.5 8.5 101 55-155 9-112 (266)
16 3c02_A Aquaglyceroporin; membr 99.6 7E-16 2.4E-20 123.8 8.0 103 56-158 8-115 (258)
17 3llq_A Aquaporin Z 2; aquapori 99.6 8.7E-16 3E-20 122.8 8.3 99 56-154 28-132 (256)
18 2zz9_A Aquaporin-4; water tran 99.6 2.9E-15 1E-19 122.3 10.2 102 55-156 10-118 (301)
19 2o9g_A Aquaporin Z; integral m 99.6 1.6E-15 5.5E-20 120.1 8.1 101 56-156 3-109 (234)
20 3gd8_A Aquaporin-4; proton exc 99.6 2.5E-15 8.7E-20 118.1 8.6 101 56-156 2-109 (223)
21 1j4n_A Aquaporin 1; membrane p 99.6 7.7E-15 2.6E-19 118.4 10.4 100 56-155 9-120 (271)
22 3iyz_A Aquaporin-4; water tran 99.6 2.5E-15 8.7E-20 124.0 7.2 101 56-156 50-157 (340)
23 3cn5_A Aquaporin; membrane pro 99.6 6.4E-15 2.2E-19 120.5 7.9 101 56-156 59-167 (304)
24 2f2b_A Aquaporin AQPM; protein 99.6 7.7E-15 2.6E-19 116.9 8.0 100 56-155 3-124 (246)
25 1ldf_A Glycerol uptake facilit 99.6 4.7E-15 1.6E-19 120.3 6.8 102 55-156 5-111 (281)
26 2w2e_A AQY1, aquaporin, aquapo 99.6 1.5E-14 5.3E-19 117.0 9.7 107 51-157 38-156 (279)
27 3kcu_A Probable formate transp 58.9 20 0.00068 28.4 5.9 27 54-80 158-184 (285)
28 2knc_A Integrin alpha-IIB; tra 37.3 26 0.0009 20.6 2.5 19 130-148 11-29 (54)
29 3kly_A Putative formate transp 35.5 1.6E+02 0.0054 23.0 9.1 77 1-80 103-183 (280)
30 3tds_E Formate/nitrite transpo 34.9 67 0.0023 25.1 5.3 77 1-79 101-178 (268)
31 4fc4_A Nitrite transporter NIR 26.2 1.6E+02 0.0055 22.8 6.2 77 1-79 95-172 (261)
32 3s2u_A UDP-N-acetylglucosamine 24.5 11 0.00039 30.3 -0.9 19 108-126 11-29 (365)
33 4f35_D Transporter, NADC famil 22.0 2.7E+02 0.0094 22.7 7.2 28 89-116 165-192 (449)
34 2kv5_A FST, putative uncharact 21.0 1E+02 0.0035 16.1 3.5 22 135-156 4-25 (33)
35 4b19_A PEPA1; toxin, toxin apo 20.8 97 0.0033 15.8 2.6 25 131-155 3-27 (30)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-37 Score=255.39 Aligned_cols=148 Identities=39% Similarity=0.738 Sum_probs=131.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||++++.|++||++||++|++++|.++++... .+++.+.+.++.+..++|+.|+++||+|++++++++|
T Consensus 126 ~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~---------~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d 196 (340)
T 3iyz_A 126 KISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCD 196 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhc---------CceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5899999999999999999999999999876432 2344556667789999999999999999999999998
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccccccceecchhhhHHHHHHHHHHHHHhccCC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 157 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 157 (178)
+++.......|++||+++.+.....+++||++|||||||||+++.++|.++||||+||++|+++|+++|++++.+..
T Consensus 197 ~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 197 DKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred CccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 87655446789999999988888888999999999999999999999999999999999999999999999886654
No 2
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=243.51 Aligned_cols=146 Identities=38% Similarity=0.743 Sum_probs=128.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||+|++.|++||++||++|+.++|.+++++.. ...+.+.+.++.+..++++.|+++||+|+++++.++|
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~---------~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~ 148 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVV---------GGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCD 148 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH---------TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---------cceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999886543 1123345566789999999999999999999999998
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccccccceecchhhhHHHHHHHHHHHHHhcc
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
+++....+..|+.||+++.......++.||++||||||||||++.++|+++||||++|++|+++++++|++++.|
T Consensus 149 ~~~~~~~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 149 SKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp TTCSCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCCccCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 877654568899999999877777778999999999999999999999999999999999999999999998754
No 3
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=3.5e-37 Score=248.44 Aligned_cols=148 Identities=31% Similarity=0.564 Sum_probs=131.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
+++|.+++.|++||++||++|+++++.++++.... ....+.+.++.+..++++.|+++||+|++++++++|
T Consensus 80 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~---------~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d 150 (263)
T 2b6o_A 80 QMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG---------NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYD 150 (263)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCS---------SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---------ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999999864421 122344556789999999999999999999999988
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccccccceecchhhhHHHHHHHHHHHHHhccCC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 157 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 157 (178)
+++.......|+.||+++.+++++.+++||++|||||||||+++.++|+++||||+||++|+++|+++|++++.++.
T Consensus 151 ~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~ 227 (263)
T 2b6o_A 151 ERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL 227 (263)
T ss_dssp TTSCSSCCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred ccCCCCcccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 77655556899999999999999999999999999999999999999999999999999999999999999877554
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.3e-37 Score=251.97 Aligned_cols=147 Identities=39% Similarity=0.747 Sum_probs=129.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||++++.|++||++||++|++++|.++++... .+.+.+.+.+..+..++++.|+++||+|++++++++|
T Consensus 87 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~---------~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d 157 (301)
T 2zz9_A 87 KISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCD 157 (301)
T ss_dssp SSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGG---------GTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---------CceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999987542 1223345666789999999999999999999999988
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccccccceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
+++.....+.|++||+++.+.....++.||++||||||||||++.++|.++|+||+||++|+++|+++|++++.++
T Consensus 158 ~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 158 DKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp SSSSCCSSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred CCCCCccchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCc
Confidence 7765445689999999998888888899999999999999999999999999999999999999999999987654
No 5
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=248.80 Aligned_cols=150 Identities=29% Similarity=0.527 Sum_probs=133.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||++++.|++||++||++|++++|.++++... ...+.+.|.++.+..++++.|+++||+|++++++++|
T Consensus 82 ~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~---------~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d 152 (266)
T 3d9s_A 82 QISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR---------GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTD 152 (266)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH---------TTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---------CceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999976432 1233455666789999999999999999999999998
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcccccc-ceecchhhhHHHHHHHHHHHHHhccCCCC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTA-HWIYWVAPILGSIVSTLLYKYVFSKDHDG 159 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~-~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 159 (178)
+++.......|+.||+++.+..+..+++||++|||||||||+++.++|++ +||||++|++|+++|+++|++++.++.+.
T Consensus 153 ~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~~ 232 (266)
T 3d9s_A 153 SRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 232 (266)
T ss_dssp TTCCSCCCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred ccCCCccchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCCchh
Confidence 77765456899999999999999999999999999999999999999998 99999999999999999999998765543
No 6
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=7.8e-38 Score=254.52 Aligned_cols=160 Identities=24% Similarity=0.370 Sum_probs=134.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCC---------CCCccceeecCCCCCccHHHHHHHHHHHHHHH
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSS---------AGLSNGFCTTVPHASLTTVQAFLAEFFSTSLL 71 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l 71 (178)
++||++++.|++||++||++|++++|.++++........ +....+.++|.|.++.+..++++.|+++||+|
T Consensus 80 ~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~L 159 (281)
T 1ldf_A 80 CFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAIL 159 (281)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999998754321100 01224567888988889999999999999999
Q ss_pred HHHHHhhccCCCCCC-CChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-------ccc------cceecchh
Q psy10806 72 VFTCCGVWDSRNAKF-GDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-------VWT------AHWIYWVA 137 (178)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-------~~~------~~wvy~v~ 137 (178)
++++++++|+++... ..+.|+.||+++.+++++.++.||++||||||||||++.. .|+ |+||||++
T Consensus 160 v~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vg 239 (281)
T 1ldf_A 160 MGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFG 239 (281)
T ss_dssp HHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHH
T ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHH
Confidence 999999998876542 3589999999999999999999999999999999999851 232 79999999
Q ss_pred hhHHHHHHHHHHHHHhccCCCCC
Q psy10806 138 PILGSIVSTLLYKYVFSKDHDGK 160 (178)
Q Consensus 138 p~~Ga~~a~~~~~~~~~~~~~~~ 160 (178)
|++|+++|+++|+++++++.+++
T Consensus 240 Pi~Ga~la~~~y~~l~~~~~~~~ 262 (281)
T 1ldf_A 240 PIVGAIVGAFAYRKLIGRHLPCD 262 (281)
T ss_dssp HHHHHHHHHHHHHHHTGGGC---
T ss_pred HHHHHHHHHHHHHHHhCccCCcc
Confidence 99999999999999988766533
No 7
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=6.8e-36 Score=242.45 Aligned_cols=147 Identities=22% Similarity=0.402 Sum_probs=130.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||+|++.|++||++||++|++++|.++++... +.+.|.++.+..++++.|+++||+|+++++.+.+
T Consensus 124 ~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~------------~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~ 191 (279)
T 2w2e_A 124 AIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA------------FANALGGGASRTRGLFLEAFGTAILCLTVLMLAV 191 (279)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC------------CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce------------eeccCCccccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 5899999999999999999999999999976542 3566777789999999999999999999999876
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcccc-ccceecchhhhHHHHHHHHHHHHHhccCCCC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVW-TAHWIYWVAPILGSIVSTLLYKYVFSKDHDG 159 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~-~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~~~ 159 (178)
+++. ...+.|+.||+++.++.++.++.||++||||||||||++.+.| .++||||+||++|+++|+++|+++...+.++
T Consensus 192 ~~~~-~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~ 270 (279)
T 2w2e_A 192 EKHR-ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQT 270 (279)
T ss_dssp SCST-TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred CCCC-CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 5543 2358999999999999999999999999999999999998765 6899999999999999999999998776543
Q ss_pred C
Q psy10806 160 K 160 (178)
Q Consensus 160 ~ 160 (178)
.
T Consensus 271 ~ 271 (279)
T 2w2e_A 271 T 271 (279)
T ss_dssp S
T ss_pred C
Confidence 3
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=3.4e-36 Score=239.08 Aligned_cols=152 Identities=28% Similarity=0.477 Sum_probs=130.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHccccccccc-CCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPV-SSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 79 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~ 79 (178)
++||+|++.|++||++||++|++++|.++++...... .++....+.+++.|. +.+..++++.|+++||+|+++++.++
T Consensus 78 ~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~-~~~~~~~~~~E~i~T~~Lv~~i~~~~ 156 (234)
T 2o9g_A 78 RFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPG-GYSMLSALVVELVLSAGFLLVIHGAT 156 (234)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCC-ccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999999986432111 012234456677776 67899999999999999999999998
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccc--cccceecchhhhHHHHHHHHHHHHHhcc
Q psy10806 80 DSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNV--WTAHWIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 80 ~~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
|+++. ....|+.||+++.++.++.++.||++||||||||||++.++ |+++||||++|++|+++++++|++++++
T Consensus 157 d~~~~--~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 157 DKFAP--AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp STTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCCc--cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 86543 35899999999999999999999999999999999999875 4599999999999999999999998754
No 9
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=8.6e-37 Score=247.09 Aligned_cols=148 Identities=24% Similarity=0.502 Sum_probs=127.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||+|++.|++||++||++|++++|.++++... ...+.. .+.++.+..++++.|+++||+|++++++++|
T Consensus 90 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-------~~~g~~--~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d 160 (271)
T 1j4n_A 90 QISVLRAIMYIIAQCVGAIVATAILSGITSSLPD-------NSLGLN--ALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160 (271)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT-------CCTTCC--CCCTTCCTTGGGHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc-------cccccc--cCCCccchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5899999999999999999999999999865321 111222 2334577889999999999999999999988
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccccccceecchhhhHHHHHHHHHHHHHhccCC
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 157 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 157 (178)
+++.....+.|+.||+++.+.....++.||+++||||||||++++++|+++|+||+||++|+++++++|++++.++.
T Consensus 161 ~~~~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 161 RRRRDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp SSCCCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred ccCCCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 87654456899999999998878778999999999999999999999999999999999999999999999887654
No 10
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.4e-36 Score=248.66 Aligned_cols=148 Identities=26% Similarity=0.489 Sum_probs=128.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||+|++.|++||++||++|++++|.++++..... +.+.+.+.++.+..++++.|+++||+|+++++.++|
T Consensus 136 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~--------~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d 207 (304)
T 3cn5_A 136 KVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQF--------GGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATD 207 (304)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHT--------TTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--------cCcccccCCCccHHHHHHHHHHHHHHHHHHHhheec
Confidence 589999999999999999999999999998764311 112233455789999999999999999999999888
Q ss_pred CCCCCCCC----hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHh---ccccccceecchhhhHHHHHHHHHHHHHh
Q psy10806 81 SRNAKFGD----SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIY---SNVWTAHWIYWVAPILGSIVSTLLYKYVF 153 (178)
Q Consensus 81 ~~~~~~~~----~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~---~~~~~~~wvy~v~p~~Ga~~a~~~~~~~~ 153 (178)
+++..... +.|+.||++++++.++.+++||+++|||||||||++ .++|+++|+||+||++|+++|+++|++++
T Consensus 208 ~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~ 287 (304)
T 3cn5_A 208 PKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 287 (304)
T ss_dssp EEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHh
Confidence 66543322 789999999999999999999999999999999999 56899999999999999999999999987
Q ss_pred ccC
Q psy10806 154 SKD 156 (178)
Q Consensus 154 ~~~ 156 (178)
.+.
T Consensus 288 ~~~ 290 (304)
T 3cn5_A 288 RAA 290 (304)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 11
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.5e-35 Score=236.10 Aligned_cols=149 Identities=26% Similarity=0.441 Sum_probs=127.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
++||+|++.|++||++||++|++++|.++++...... ......+.+++.|. ..+..++++.|+++||+|++++++++|
T Consensus 103 ~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~-~~~~~~~~~~t~p~-~~s~~~~f~~E~i~Tf~Lv~~il~~~d 180 (256)
T 3llq_A 103 RFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDL-GGFASNGYGEHSPG-GYSLVSALLIEIILTAFFLIVILGSTH 180 (256)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCC-TTTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cccccccccccCCc-ccCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999865322111 11223455667775 668999999999999999999999988
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhccc--cccceecchhhhHHHHHHHHHHHHHh
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNV--WTAHWIYWVAPILGSIVSTLLYKYVF 153 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~--~~~~wvy~v~p~~Ga~~a~~~~~~~~ 153 (178)
+++. ..+.|+.||+++.++.++.++.||++||||||||||++.++ |+++||||+||++|+++|+++|+++.
T Consensus 181 ~~~~--~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 181 GRVP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TTSC--TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCC--ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 7654 35899999999999999999999999999999999999875 56999999999999999999999874
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.9e-34 Score=230.65 Aligned_cols=146 Identities=29% Similarity=0.444 Sum_probs=128.3
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
|+||+|++.|++||++||++|++++|.+++++.. .+.+.+++.|.++.+.+++++.|+++||+|+++++++.+
T Consensus 94 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-------~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~ 166 (246)
T 2f2b_A 94 KFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAA-------TVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAV 166 (246)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHH-------HTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccch-------hcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEec
Confidence 6899999999999999999999999999987321 134567788877889999999999999999999999765
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHh--c----cccccceecchhhhHHHHHHHHHHHHHhc
Q psy10806 81 SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIY--S----NVWTAHWIYWVAPILGSIVSTLLYKYVFS 154 (178)
Q Consensus 81 ~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~--~----~~~~~~wvy~v~p~~Ga~~a~~~~~~~~~ 154 (178)
+++.. ....|+.+|+++.+++++.+++||+++||||||||+++ . .+|.|+|+||++|++|+++++++|+++++
T Consensus 167 ~~~~~-~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 167 DERAP-KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp STTSC-TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCC-CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 44332 45899999999999999999999999999999999993 2 37899999999999999999999998864
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=9.3e-35 Score=233.80 Aligned_cols=153 Identities=25% Similarity=0.333 Sum_probs=125.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCC-CCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSA-GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 79 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~ 79 (178)
++||+|++.|++||++||++|++++|.++++......... ....+.+.+ .+..++++.|+++||+|++++++++
T Consensus 82 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t-----~p~~~~~~~E~i~Tf~Lv~~i~~~~ 156 (258)
T 3c02_A 82 KFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPS-----ISLTGAFFNELILTGILLLVILVVV 156 (258)
T ss_dssp SSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTT-----SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCC-----CchHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999987654211110 011233333 3455699999999999999999998
Q ss_pred cCCCC-CCCChh-HHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc------cc----ccceecchhhhHHHHHHHH
Q psy10806 80 DSRNA-KFGDSV-AIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN------VW----TAHWIYWVAPILGSIVSTL 147 (178)
Q Consensus 80 ~~~~~-~~~~~~-~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~------~~----~~~wvy~v~p~~Ga~~a~~ 147 (178)
|+|+. ....+. |+.||+++.+++++.++.||++||||||||||++.+ +| .|+||||++|++|++++++
T Consensus 157 d~~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~ 236 (258)
T 3c02_A 157 DENICGKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQ 236 (258)
T ss_dssp CHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CcccCCcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHH
Confidence 87754 233477 999999999999999999999999999999999862 34 6799999999999999999
Q ss_pred HHHHHhccCCC
Q psy10806 148 LYKYVFSKDHD 158 (178)
Q Consensus 148 ~~~~~~~~~~~ 158 (178)
+|++++.++.+
T Consensus 237 ~y~~~~~~~~~ 247 (258)
T 3c02_A 237 FYDKVICPLVD 247 (258)
T ss_dssp HHHHTHHHHHH
T ss_pred HHHHHhcccCC
Confidence 99999877654
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.72 E-value=3.9e-17 Score=131.37 Aligned_cols=102 Identities=28% Similarity=0.308 Sum_probs=88.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-ccccc
Q psy10806 55 LTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAH 131 (178)
Q Consensus 55 ~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~~ 131 (178)
.+.++.++.|+++||+|+++.+++.........+ ..++.+|+++++.+++.+++||+|+|||++++.++.++ +|...
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~ 86 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRA 86 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHH
Confidence 4678999999999999999999876432221112 46889999999999999999999999999999999876 89999
Q ss_pred eecchhhhHHHHHHHHHHHHHhccC
Q psy10806 132 WIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 132 wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
|+|+++|++|+++++.+.+.+++++
T Consensus 87 ~~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 87 ICYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999999999999988654
No 15
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.64 E-value=4.2e-16 Score=125.47 Aligned_cols=101 Identities=25% Similarity=0.368 Sum_probs=87.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-ccccc
Q psy10806 55 LTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTAH 131 (178)
Q Consensus 55 ~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~~ 131 (178)
.+.++.++.|+++||+|++..+++..+......+ ..++..|+.+++.+++.+++||+|+|||++++.++.++ .|...
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRA 88 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHH
Confidence 4678999999999999999998876432222222 46889999999999999999999999999999999987 79999
Q ss_pred eecchhhhHHHHHHHHHHHHHhcc
Q psy10806 132 WIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 132 wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
+.|+++|++|+++|+.+.+.+++.
T Consensus 89 ~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 89 FFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999999999988754
No 16
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.62 E-value=7e-16 Score=123.76 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=86.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccC--CCCCCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-cccc
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDS--RNAKFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWTA 130 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~--~~~~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 130 (178)
+.++.++.|+++||+|++..+++... +.....+ ...+..|+.+++.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 67899999999999999997765321 1111122 46788899999999999999999999999999999987 8999
Q ss_pred ceecchhhhHHHHHHHHHHHHHhccCCC
Q psy10806 131 HWIYWVAPILGSIVSTLLYKYVFSKDHD 158 (178)
Q Consensus 131 ~wvy~v~p~~Ga~~a~~~~~~~~~~~~~ 158 (178)
...|+++|++|+++++.+.+.+++++.+
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~ 115 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHGFIS 115 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcchhhh
Confidence 9999999999999999999888876543
No 17
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=8.7e-16 Score=122.82 Aligned_cols=99 Identities=27% Similarity=0.377 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhcc--CCCCCC-CC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-ccc
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWD--SRNAKF-GD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 129 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~--~~~~~~-~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 129 (178)
+.++.++.|+++||+|++..+++.. ...... .+ ..++..|+.+++.+++.+++||+++|||++++.++.++ +|.
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 107 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPAS 107 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHH
Confidence 5789999999999999999887642 111111 11 46789999999999999999999999999999999987 899
Q ss_pred cceecchhhhHHHHHHHHHHHHHhc
Q psy10806 130 AHWIYWVAPILGSIVSTLLYKYVFS 154 (178)
Q Consensus 130 ~~wvy~v~p~~Ga~~a~~~~~~~~~ 154 (178)
+...|+++|++|+++|+.+.+.+++
T Consensus 108 ~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 108 SLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999888775
No 18
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.60 E-value=2.9e-15 Score=122.26 Aligned_cols=102 Identities=23% Similarity=0.249 Sum_probs=87.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhccCCCC----CCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-c
Q psy10806 55 LTTVQAFLAEFFSTSLLVFTCCGVWDSRNA----KFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-V 127 (178)
Q Consensus 55 ~s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~----~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~ 127 (178)
.+.++.++.|+++||+|+++.+++...... ...+ ...+..|+.+++.+++++++||+|+|||.+++.++.++ .
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~ 89 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKIS 89 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCC
Confidence 468999999999999999999886532111 1112 46889999999999999999999999999999999987 8
Q ss_pred cccceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 128 WTAHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 128 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
|.....|+++|++|+++|+.+.+.++++.
T Consensus 90 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 90 IAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999998887653
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.60 E-value=1.6e-15 Score=120.06 Aligned_cols=101 Identities=26% Similarity=0.303 Sum_probs=85.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccCCC-CC-CC-C--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-ccc
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDSRN-AK-FG-D--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 129 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~-~~-~~-~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 129 (178)
+.++.++.|+++||+|++..+++....+ .. .. + ..++..|+.+++.+++.+++||+|+|||.+++..+.++ +|.
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAK 82 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHH
Confidence 4678999999999999999877532111 11 11 1 46789999999999999999999999999999999987 899
Q ss_pred cceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 130 AHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 130 ~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
+...|+++|++|+++++.+.+.+++..
T Consensus 83 ~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 83 EVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999998887643
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.5e-15 Score=118.11 Aligned_cols=101 Identities=24% Similarity=0.269 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccCCCC--C--CCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-cc
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDSRNA--K--FGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VW 128 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~--~--~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~ 128 (178)
..++.++.|+++||+|++..+++...... . ..+ ...+..|+.++..+++.+++||+|+|||.+++..+.++ +|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 46899999999999999998887542111 1 112 56888999999999999999999999999999999877 79
Q ss_pred ccceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 129 TAHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 129 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
.+...|+++|++|+++++.+.+.+++++
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999988877543
No 21
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.58 E-value=7.7e-15 Score=118.44 Aligned_cols=100 Identities=28% Similarity=0.379 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccC-------CCC-CC-CC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHh
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDS-------RNA-KF-GD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIY 124 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~-------~~~-~~-~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~ 124 (178)
+.++.++.|+++|++|++..+++... +.. .. .+ ..++..|+.+++.+++++++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 57899999999999999998775321 111 11 11 568899999999999999999999999999999999
Q ss_pred cc-ccccceecchhhhHHHHHHHHHHHHHhcc
Q psy10806 125 SN-VWTAHWIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 125 ~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
++ .|.+...|+++|++|+++|+.+.+.++..
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 87 89999999999999999999998887753
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.57 E-value=2.5e-15 Score=123.98 Aligned_cols=101 Identities=23% Similarity=0.256 Sum_probs=85.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccCCCC----CCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-cc
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDSRNA----KFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VW 128 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~~~~----~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~ 128 (178)
+.++.++.|+++||+|+++.+++...-.. ...+ ...++.|+.+++.+++++++||+|+|||.+++.++.++ .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 56899999999999999998886532111 1111 56889999999999999999999999999999999877 79
Q ss_pred ccceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 129 TAHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 129 ~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
.....|+++|++|+++|+.+.+.+++.+
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999888877543
No 23
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.56 E-value=6.4e-15 Score=120.47 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=85.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccC---CCC--CCCC--hhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-c
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDS---RNA--KFGD--SVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-V 127 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~---~~~--~~~~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~ 127 (178)
+.++.++.|+++||+|+++.+++... ... ...+ ..+++.|+.+++.+++++++||+|+|||.+++.++.++ .
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 57899999999999999998775321 111 1111 46788999999999999999999999999999999987 7
Q ss_pred cccceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 128 WTAHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 128 ~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
|.+...|+++|++|+++|+.+.+.+++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999998887654
No 24
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.55 E-value=7.7e-15 Score=116.94 Aligned_cols=100 Identities=21% Similarity=0.334 Sum_probs=84.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccC-----C-C-------CCC---CC-----hhHHHHHHHHHHHHHHhccCCCCCCC
Q psy10806 56 TTVQAFLAEFFSTSLLVFTCCGVWDS-----R-N-------AKF---GD-----SVAIKFALVIALCSITVGPYTGASMN 114 (178)
Q Consensus 56 s~~~~~~~E~~~Tf~l~~~i~~~~~~-----~-~-------~~~---~~-----~~~~~igl~v~~~~~~~~~~tG~~lN 114 (178)
+.++.++.|+++||+|++..+++... + . ... .. ..++..|+.+++.+++.+++||+|+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 57899999999999999998764311 0 0 000 01 27889999999999999999999999
Q ss_pred hhhcHHHHHhcc-ccccceecchhhhHHHHHHHHHHHHHhcc
Q psy10806 115 PARSLAPAIYSN-VWTAHWIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 115 PAr~lg~~l~~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
||.+++..+.++ +|.+...|+++|++|+++++.+.+.++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 124 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGI 124 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 999999999987 89999999999999999999999988876
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.55 E-value=4.7e-15 Score=120.31 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=85.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCCCChhHHHHHHHHHHHHHHhccCCCCCCChhhcHHHHHhcc-ccc
Q psy10806 55 LTTVQAFLAEFFSTSLLVFTCCGVWD----SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSN-VWT 129 (178)
Q Consensus 55 ~s~~~~~~~E~~~Tf~l~~~i~~~~~----~~~~~~~~~~~~~igl~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 129 (178)
.+.++.++.|+++||+|++..+++.. ++.....-..++..|+.+++.+++.+++||+|+|||.+++..+.++ +|.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 36789999999999999998776531 1111111146888999999999999999999999999999999987 899
Q ss_pred cceecchhhhHHHHHHHHHHHHHhccC
Q psy10806 130 AHWIYWVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 130 ~~wvy~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
+...|+++|++|+++++.+.+.+++++
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999988887654
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.55 E-value=1.5e-14 Score=117.03 Aligned_cols=107 Identities=12% Similarity=0.125 Sum_probs=86.7
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhhc---cCCC----CCCC--C--hhHHHHHHHHHHHHHHhccCCCCCCChhhcH
Q psy10806 51 PHASLTTVQAFLAEFFSTSLLVFTCCGVW---DSRN----AKFG--D--SVAIKFALVIALCSITVGPYTGASMNPARSL 119 (178)
Q Consensus 51 p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~---~~~~----~~~~--~--~~~~~igl~v~~~~~~~~~~tG~~lNPAr~l 119 (178)
|..-.+.++.++.|+++||+|++..++.. .... .... + ..++..|+.+++.+++++++||+|+|||.++
T Consensus 38 ~~~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 117 (279)
T 2w2e_A 38 SDSVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTL 117 (279)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHH
Confidence 33334677899999999999999877642 1111 1111 1 4678999999999999999999999999999
Q ss_pred HHHHhcc-ccccceecchhhhHHHHHHHHHHHHHhccCC
Q psy10806 120 APAIYSN-VWTAHWIYWVAPILGSIVSTLLYKYVFSKDH 157 (178)
Q Consensus 120 g~~l~~~-~~~~~wvy~v~p~~Ga~~a~~~~~~~~~~~~ 157 (178)
+..+.++ .|.+...|+++|++|+++|+.+.+.+++...
T Consensus 118 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~ 156 (279)
T 2w2e_A 118 ALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEI 156 (279)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999987 8999999999999999999999988876543
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=58.95 E-value=20 Score=28.42 Aligned_cols=27 Identities=7% Similarity=0.135 Sum_probs=20.9
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHhhcc
Q psy10806 54 SLTTVQAFLAEFFSTSLLVFTCCGVWD 80 (178)
Q Consensus 54 ~~s~~~~~~~E~~~Tf~l~~~i~~~~~ 80 (178)
+.+..+.|+-=++|-++..+.++....
T Consensus 158 ~~~~~~~f~~GIlcN~lVclaVw~~~~ 184 (285)
T 3kcu_A 158 HHTFIEAVCLGILANLMVCLAVWMSYS 184 (285)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347788888888888888888877643
No 28
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.32 E-value=26 Score=20.62 Aligned_cols=19 Identities=26% Similarity=0.448 Sum_probs=10.9
Q ss_pred cceecchhhhHHHHHHHHH
Q psy10806 130 AHWIYWVAPILGSIVSTLL 148 (178)
Q Consensus 130 ~~wvy~v~p~~Ga~~a~~~ 148 (178)
-.|+++++-+.|-++=+++
T Consensus 11 p~wiIi~svl~GLllL~li 29 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4577776666665544433
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=35.46 E-value=1.6e+02 Score=23.05 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=42.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcc--cccccccCCC--CCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITP--EEILFPVSSA--GLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC 76 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~ 76 (178)
|++|++++--|.-=++|=++|++++-.++. ..... .... ........ -..+.+..+.|+-=++|-++..+.++
T Consensus 103 ~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~-~~~~~~~~~~~ia~--~K~~~~~~~~f~~GIlcN~lVclaVw 179 (280)
T 3kly_A 103 KISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFME-DGGQLGLNAMAISQ--HKLHHTFLQAFALGLMCNILVCLAVW 179 (280)
T ss_dssp SCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGT-TTTHHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccC-CchHHHHHHHHHHH--HHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 467777777776666666666666554421 11110 0000 00000111 11234778888888888888888887
Q ss_pred hhcc
Q psy10806 77 GVWD 80 (178)
Q Consensus 77 ~~~~ 80 (178)
....
T Consensus 180 ~~~~ 183 (280)
T 3kly_A 180 MTFS 183 (280)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 7643
No 30
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=34.87 E-value=67 Score=25.12 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHccc-ccccccCCCCCccceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPE-EILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 79 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~ 79 (178)
|++|++.+--|.-=++|=++|++++-.++.. .................. ..+.+..+.|+-=+++-++..+.++...
T Consensus 101 ~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~~~ia~~--K~~~~~~~~f~~gIlcN~lVclaVw~~~ 178 (268)
T 3tds_E 101 GVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFFANTAAS--KASMPFTALFFRGILCNILVCVSVLCSF 178 (268)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHHHHHHHH--HHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888777777777777777665554321 111000000000000000 0134677888888888888888877654
No 31
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=26.18 E-value=1.6e+02 Score=22.77 Aligned_cols=77 Identities=10% Similarity=0.026 Sum_probs=39.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHcccccccccCCCCCc-cceeecCCCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q psy10806 1 MITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLS-NGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVW 79 (178)
Q Consensus 1 ~~~~~~~~~Yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~s~~~~~~~E~~~Tf~l~~~i~~~~ 79 (178)
|++|++.+--|.-=++|=++|++++-.++...-.....+.... ....... .+.+..+.|+-=+++-++..+.++...
T Consensus 95 ~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~~~ia~~K--~~~~~~~~f~~gIlcN~lVclaVw~~~ 172 (261)
T 4fc4_A 95 TISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAK--TTAPATVLFFKGALCNWLVCLAIWMAI 172 (261)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHHHHHHHHH--HHSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHHHHHHHHH--hcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888877766666666666655444321100000000000 0000000 123567777777778887777777654
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=24.49 E-value=11 Score=30.25 Aligned_cols=19 Identities=26% Similarity=0.239 Sum_probs=16.2
Q ss_pred CCCCCCChhhcHHHHHhcc
Q psy10806 108 YTGASMNPARSLAPAIYSN 126 (178)
Q Consensus 108 ~tG~~lNPAr~lg~~l~~~ 126 (178)
=||+|++||.+++-.+...
T Consensus 11 GTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 11 GTGGHVFPALACAREFQAR 29 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhC
Confidence 3889999999999999653
No 33
>4f35_D Transporter, NADC family; transport protein; HET: BNG CIT; 3.20A {Vibrio cholerae}
Probab=22.01 E-value=2.7e+02 Score=22.69 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCCCChh
Q psy10806 89 SVAIKFALVIALCSITVGPYTGASMNPA 116 (178)
Q Consensus 89 ~~~~~igl~v~~~~~~~~~~tG~~lNPA 116 (178)
..++.++......+......+|..-|.-
T Consensus 165 ~~~lll~~~~aa~igg~~t~ig~~~N~i 192 (449)
T 4f35_D 165 YVFVLLGVAYSASIGGIATLVGSPPNAI 192 (449)
T ss_dssp TTTTHHHHHHHHHHHHSSSSSSSHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcccCcCCCccc
Confidence 4456677777666666667777666643
No 34
>2kv5_A FST, putative uncharacterized protein RNAI; toxin-antitoxin, bacterial, toxin; NMR {Enterococcus faecalis}
Probab=20.97 E-value=1e+02 Score=16.09 Aligned_cols=22 Identities=9% Similarity=0.149 Sum_probs=13.3
Q ss_pred chhhhHHHHHHHHHHHHHhccC
Q psy10806 135 WVAPILGSIVSTLLYKYVFSKD 156 (178)
Q Consensus 135 ~v~p~~Ga~~a~~~~~~~~~~~ 156 (178)
++-.++|+++.+++.+++-..-
T Consensus 4 i~~~IIaPivVGvvl~L~d~WL 25 (33)
T 2kv5_A 4 LMSLVIAPIFVGLVLEMISRVL 25 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677777777776654433
No 35
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=20.76 E-value=97 Score=15.83 Aligned_cols=25 Identities=8% Similarity=0.317 Sum_probs=17.6
Q ss_pred ceecchhhhHHHHHHHHHHHHHhcc
Q psy10806 131 HWIYWVAPILGSIVSTLLYKYVFSK 155 (178)
Q Consensus 131 ~wvy~v~p~~Ga~~a~~~~~~~~~~ 155 (178)
..+-+++|.+-+.+-+++-+++-.+
T Consensus 3 ifv~iia~visGcivalF~hWL~~r 27 (30)
T 4b19_A 3 IFVHIIAPVISGCAIAFFSYWLSRR 27 (30)
T ss_dssp GGTSSTTTTHHHHHHHHHHHHHHHH
T ss_pred eehhhHHHHHHHHHHHHHHHHHHhc
Confidence 3456788888888888777766543
Done!