Query psy10817
Match_columns 199
No_of_seqs 129 out of 1364
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 19:16:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10817.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10817hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qio_A GAG-POL polyprotein; RN 99.0 2.1E-10 7.1E-15 85.8 4.0 39 21-59 107-145 (150)
2 3h08_A RNH (ribonuclease H); R 98.9 7.2E-10 2.5E-14 82.1 3.9 40 14-58 102-141 (146)
3 1jl1_A Ribonuclease HI; RNAse 98.8 1.9E-09 6.6E-14 80.8 3.5 37 21-58 104-140 (155)
4 2qkb_A Ribonuclease H1, HS-RNA 98.8 1.3E-09 4.6E-14 81.4 2.4 37 21-58 112-148 (154)
5 2e4l_A Ribonuclease HI, RNAse 98.8 1.6E-09 5.4E-14 81.5 2.4 37 21-58 106-142 (158)
6 2kq2_A Ribonuclease H-related 98.8 4.4E-10 1.5E-14 83.6 -1.6 43 14-59 93-135 (147)
7 3p1g_A Xenotropic murine leuke 98.7 1.7E-09 5.7E-14 82.0 1.1 29 30-58 120-153 (165)
8 1ril_A Ribonuclease H; hydrola 98.7 3.4E-09 1.2E-13 80.4 0.7 38 20-58 108-145 (166)
9 2lsn_A Reverse transcriptase; 98.5 1.5E-08 5.2E-13 76.7 1.3 38 21-58 117-160 (165)
10 3hst_B Protein RV2228C/MT2287; 97.9 6.9E-06 2.4E-10 59.7 4.2 52 3-58 78-130 (141)
11 3u3g_D Ribonuclease H, RNAse H 97.8 8.6E-06 2.9E-10 58.9 2.3 52 3-58 81-134 (140)
12 2ehg_A Ribonuclease HI; RNAse 97.6 2.2E-05 7.4E-10 57.8 1.7 22 33-58 110-131 (149)
13 3alr_A Nanos protein; zinc-fin 65.9 3.4 0.00012 28.0 2.1 25 144-168 72-98 (106)
14 2i0f_A 6,7-dimethyl-8-ribityll 46.9 16 0.00053 26.8 3.2 32 24-57 35-66 (157)
15 2bhu_A Maltooligosyltrehalose 36.4 41 0.0014 29.7 4.8 34 17-50 192-225 (602)
16 2c92_A 6,7-dimethyl-8-ribityll 36.0 25 0.00085 25.8 2.8 41 15-57 30-72 (160)
17 1j0h_A Neopullulanase; beta-al 31.0 50 0.0017 29.0 4.4 32 17-48 222-253 (588)
18 1wzl_A Alpha-amylase II; pullu 30.3 46 0.0016 29.1 4.1 31 17-47 219-249 (585)
19 3m07_A Putative alpha amylase; 28.9 64 0.0022 28.6 4.8 35 17-51 202-236 (618)
20 1ua7_A Alpha-amylase; beta-alp 28.1 56 0.0019 27.2 4.1 31 17-47 74-104 (422)
21 3nq4_A 6,7-dimethyl-8-ribityll 27.9 45 0.0016 24.2 3.0 33 24-58 35-71 (156)
22 1c2y_A Protein (lumazine synth 27.5 42 0.0015 24.4 2.8 32 25-58 37-70 (156)
23 2guy_A Alpha-amylase A; (beta- 27.0 66 0.0023 27.1 4.4 32 17-48 97-128 (478)
24 1rvv_A Riboflavin synthase; tr 26.6 46 0.0016 24.1 2.8 32 25-58 36-70 (154)
25 3vgf_A Malto-oligosyltrehalose 26.6 76 0.0026 27.6 4.8 34 17-50 167-200 (558)
26 2obx_A DMRL synthase 1, 6,7-di 26.5 74 0.0025 23.1 4.0 30 27-58 37-69 (157)
27 1ea9_C Cyclomaltodextrinase; h 26.5 42 0.0014 29.4 3.2 31 17-47 218-248 (583)
28 1hqk_A 6,7-dimethyl-8-ribityll 26.5 46 0.0016 24.1 2.8 32 25-58 36-70 (154)
29 4aef_A Neopullulanase (alpha-a 26.5 65 0.0022 28.5 4.4 29 18-46 286-314 (645)
30 1sn9_A BBAT, tetrameric beta-B 26.2 16 0.00054 17.6 0.2 13 45-57 4-16 (26)
31 1ht6_A AMY1, alpha-amylase iso 25.4 76 0.0026 26.2 4.4 31 17-47 68-98 (405)
32 4aie_A Glucan 1,6-alpha-glucos 25.4 73 0.0025 27.1 4.4 30 17-46 79-108 (549)
33 2job_A Antilipopolysaccharide 25.3 23 0.00079 23.8 0.9 14 36-49 52-65 (102)
34 1di0_A Lumazine synthase; tran 25.3 80 0.0027 22.9 4.0 31 26-58 35-68 (158)
35 2x5c_A Hypothetical protein OR 25.3 8.9 0.0003 25.5 -1.1 29 120-157 38-67 (131)
36 3j20_Y 30S ribosomal protein S 24.0 23 0.00078 20.5 0.6 18 144-161 20-41 (50)
37 1mxg_A Alpha amylase; hyperthe 24.0 83 0.0028 26.3 4.4 31 17-47 86-116 (435)
38 1ejb_A Lumazine synthase; anal 23.8 53 0.0018 24.2 2.8 30 25-56 40-72 (168)
39 2cs3_A Protein C14ORF4, MY039 23.8 41 0.0014 21.7 1.8 24 141-164 13-37 (93)
40 2e8y_A AMYX protein, pullulana 23.2 1.1E+02 0.0037 27.6 5.3 33 16-48 314-346 (718)
41 1m53_A Isomaltulose synthase; 22.3 90 0.0031 27.2 4.4 30 17-46 92-121 (570)
42 1zja_A Trehalulose synthase; s 22.1 91 0.0031 27.0 4.4 30 17-46 79-108 (557)
43 1gcy_A Glucan 1,4-alpha-maltot 21.8 94 0.0032 26.7 4.4 32 17-48 92-123 (527)
44 3k1d_A 1,4-alpha-glucan-branch 21.7 91 0.0031 28.3 4.4 31 17-47 312-342 (722)
45 1wpc_A Glucan 1,4-alpha-maltoh 21.6 78 0.0027 26.8 3.8 29 17-45 82-110 (485)
46 3aie_A Glucosyltransferase-SI; 21.5 74 0.0025 29.6 3.8 28 17-44 692-719 (844)
47 2akl_A PHNA-like protein PA012 21.5 29 0.00098 24.6 0.8 23 141-163 25-50 (138)
48 1hvx_A Alpha-amylase; hydrolas 21.4 78 0.0027 27.1 3.8 29 17-45 81-109 (515)
49 1m7x_A 1,4-alpha-glucan branch 21.3 1.1E+02 0.0037 27.0 4.8 32 17-48 204-235 (617)
50 4aio_A Limit dextrinase; hydro 21.2 1E+02 0.0035 28.0 4.8 31 17-47 378-408 (884)
51 1ud2_A Amylase, alpha-amylase; 20.6 84 0.0029 26.5 3.8 29 17-45 80-108 (480)
52 1lwj_A 4-alpha-glucanotransfer 20.3 1.1E+02 0.0037 25.5 4.4 31 17-47 69-99 (441)
53 3bh4_A Alpha-amylase; calcium, 20.3 86 0.0029 26.5 3.8 29 17-45 78-106 (483)
54 2wan_A Pullulanase; hydrolase, 20.1 1.4E+02 0.0047 27.9 5.4 32 17-48 531-562 (921)
55 2e72_A POGO transposable eleme 20.0 27 0.00091 20.2 0.3 22 142-163 11-39 (49)
No 1
>3qio_A GAG-POL polyprotein; RNAse H, inhibitor, nuclease, transferase, hydrolase- complex; HET: QID; 1.40A {Hiv-1 M} SCOP: c.55.3.1 PDB: 3qin_A* 3hyf_A* 1o1w_A 3lp3_A* 1hrh_A 3k2p_A* 1rdh_A
Probab=99.00 E-value=2.1e-10 Score=85.76 Aligned_cols=39 Identities=26% Similarity=0.484 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCCC
Q psy10817 21 YSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNPS 59 (199)
Q Consensus 21 ~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a~ 59 (199)
+..+.++......|.|.|||||+|++|||.||+||++|.
T Consensus 107 ~~~l~~~l~~~~~v~~~wV~gH~g~~~Ne~AD~LA~~a~ 145 (150)
T 3qio_A 107 VNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGI 145 (150)
T ss_dssp HHHHHHHHTTCSEEEEEECCTTSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhhcCceEEEEccCcCCChhHHHHHHHHHHHH
Confidence 333333334688999999999999999999999999994
No 2
>3h08_A RNH (ribonuclease H); RNAse H, 3D-structure, endonuclease, hydrolase, magnesium, metal-binding; 1.60A {Chlorobaculum tepidum}
Probab=98.91 E-value=7.2e-10 Score=82.15 Aligned_cols=40 Identities=18% Similarity=0.086 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 14 NALLSKIYSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 14 ~~~i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
..++++|...+. ...|.|.|||||+|++|||.||+|||+|
T Consensus 102 ~~l~~~~~~~~~-----~~~v~~~~V~gH~g~~~N~~AD~LA~~a 141 (146)
T 3h08_A 102 IDLWQEILKLTT-----LHRVTFHKVKGHSDNPYNSRADELARLA 141 (146)
T ss_dssp HHHHHHHHHHHH-----HSEEEEEECCC-CCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----hCceEEEEcCCcCCcHhHHHHHHHHHHH
Confidence 455555555433 2479999999999999999999999987
No 3
>1jl1_A Ribonuclease HI; RNAse HI, protein stability, thermostability, hydrogen exchange, cooperativity, hydrolase; 1.30A {Escherichia coli} SCOP: c.55.3.1 PDB: 1f21_A 1jxb_A 1g15_A 1rch_A 1rdd_A 1rnh_A* 2rn2_A 1rda_A 1law_A 1rdb_A 1lav_A 3aa4_A 1rbu_A 1gob_A 1rdc_A 1kvc_A 3aa3_A 3aa2_A 3aa5_X 1rbv_A ...
Probab=98.81 E-value=1.9e-09 Score=80.78 Aligned_cols=37 Identities=22% Similarity=0.409 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 21 YSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 21 ~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
+..+.++.. ...|.|.|||||+|++|||.||+|||+|
T Consensus 104 ~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LA~~a 140 (155)
T 1jl1_A 104 WQRLDAALG-QHQIKWEWVKGHAGHPENERADELARAA 140 (155)
T ss_dssp HHHHHHHTT-TCEEEEEECCSSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-cCceEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 334444433 4699999999999999999999999999
No 4
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A*
Probab=98.81 E-value=1.3e-09 Score=81.45 Aligned_cols=37 Identities=32% Similarity=0.575 Sum_probs=30.2
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 21 YSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 21 ~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
+..+.++.. +..|.|.|||||+|++|||.||+|||+|
T Consensus 112 ~~~i~~l~~-~~~v~~~~V~~H~g~~~N~~AD~LA~~a 148 (154)
T 2qkb_A 112 FVALERLTQ-GMDIQWMHVPGHSGFIGNEEADRLAREG 148 (154)
T ss_dssp HHHHHHHHT-TCEEEEEECCTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCceEEEEccCCCCCHhHHHHHHHHHHH
Confidence 333444433 5689999999999999999999999988
No 5
>2e4l_A Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis} PDB: 2zqb_A
Probab=98.79 E-value=1.6e-09 Score=81.53 Aligned_cols=37 Identities=22% Similarity=0.379 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 21 YSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 21 ~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
+..+.++.. +..|.|.|||||+|++|||.||+|||+|
T Consensus 106 ~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a 142 (158)
T 2e4l_A 106 WKRLDKAAQ-LHQIDWRWVKGHAGHAENERCDQLARAA 142 (158)
T ss_dssp HHHHHHHHT-TSEEEEEECCTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-cCcEEEEEccCCCCchhHHHHHHHHHHH
Confidence 334444443 4699999999999999999999999999
No 6
>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A
Probab=98.76 E-value=4.4e-10 Score=83.63 Aligned_cols=43 Identities=23% Similarity=0.154 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCCC
Q psy10817 14 NALLSKIYSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNPS 59 (199)
Q Consensus 14 ~~~i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a~ 59 (199)
+.......+.+.+|.. .|.|.|||||+|++|||.||+|||+|.
T Consensus 93 ~~~~~~~~~l~~~l~~---~v~~~wV~gH~g~~~Ne~AD~LA~~a~ 135 (147)
T 2kq2_A 93 NEFTQAYAKLMNQYRG---IYSFEKVKAHSGNEFNDYVDMKAKSAL 135 (147)
T ss_dssp HHHHHHHHCGGGGGST---TCCBCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhcC---CeeEEEecCcCCCcchHHHHHHHHHHH
Confidence 3334455555555532 899999999999999999999999993
No 7
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 3v1q_A 3v1o_A 3v1r_A* 2hb5_A 4e89_A
Probab=98.74 E-value=1.7e-09 Score=82.05 Aligned_cols=29 Identities=34% Similarity=0.590 Sum_probs=27.8
Q ss_pred cCCeeEEEEecCCCC-----CccchhhhhhhCCC
Q psy10817 30 CGKEISFMWCPSHCG-----ISGNEAVDVAAKNP 58 (199)
Q Consensus 30 ~~~~i~l~WvPgH~g-----i~gNE~AD~~Ak~a 58 (199)
.+..|.|.|||||+| ++|||.||++||+|
T Consensus 120 ~~~~v~~~wVkgH~g~~~~~~~gNe~AD~LA~~a 153 (165)
T 3p1g_A 120 LPKRLSIIHCPGHQKGNSAEARGNRMADQAAREA 153 (165)
T ss_dssp SBSEEEEEECCSSCCSCSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCCCCcCcchHHHHHHHHHHHH
Confidence 678999999999999 99999999999998
No 8
>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A
Probab=98.66 E-value=3.4e-09 Score=80.36 Aligned_cols=38 Identities=26% Similarity=0.429 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 20 IYSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 20 i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
++..+.++.. ...|.|.|||||+|++|||.||+|||+|
T Consensus 108 l~~~i~~l~~-~~~v~~~wV~gH~g~~~Ne~AD~LAk~a 145 (166)
T 1ril_A 108 LWEALLLAMA-PHRVRFHFVKGHTGHPENERVDREARRQ 145 (166)
T ss_dssp HHHHHHHHHT-TSEEECCCCCGGGSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCeEEEEEeeCCCCchhHHHHHHHHHHH
Confidence 3334444443 4699999999999999999999999999
No 9
>2lsn_A Reverse transcriptase; RNAse H, viral protein; NMR {Simian foamy virus}
Probab=98.54 E-value=1.5e-08 Score=76.73 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCC------ccchhhhhhhCCC
Q psy10817 21 YSTWLDLVACGKEISFMWCPSHCGI------SGNEAVDVAAKNP 58 (199)
Q Consensus 21 ~~~~~~l~~~~~~i~l~WvPgH~gi------~gNE~AD~~Ak~a 58 (199)
+..+.++......|.|.|||||+|+ +|||.||+||++|
T Consensus 117 ~~~l~~~~~~~~~v~~~~VkgH~g~~~~~~~~gNe~AD~LA~~g 160 (165)
T 2lsn_A 117 WKSIAECLSMKPDITIQHEKGHQPTNTSIHTEGNALADKLATQG 160 (165)
T ss_dssp HHHHHHHHHHCTTCEEEECCSSSCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCccCCCCChHHHHHHHHHHHh
Confidence 3445555455678999999999996 5899999999987
No 10
>3hst_B Protein RV2228C/MT2287; ribonuclease H1, RV2228C N-terminal domain, fusion protein, maltose binding protein, HYDR; HET: MLR TAR; 2.25A {Mycobacterium tuberculosis}
Probab=97.94 E-value=6.9e-06 Score=59.66 Aligned_cols=52 Identities=19% Similarity=0.362 Sum_probs=40.0
Q ss_pred hhHHhhcC-CCCHHHHHHHHHHHHHHHHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 3 SLQAITSK-SCNNALLSKIYSTWLDLVACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 3 al~al~~~-~~~~~~i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
.+..|... +..++.+..++..+..|......|.|.|||+ +|||.||+|||+|
T Consensus 78 vv~~i~~~~~~~~~~l~~~~~~i~~l~~~~~~v~~~~V~~----~~N~~AD~LA~~a 130 (141)
T 3hst_B 78 VVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPR----ARNTYADRLANDA 130 (141)
T ss_dssp HHHHHTTSSCCCSHHHHHHHHHHHHHHTTSSEEEEEECCG----GGCHHHHHHHHHH
T ss_pred HHHHHhCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEcCC----cccHHHHHHHHHH
Confidence 34555553 4555556677777777877778999999996 6999999999988
No 11
>3u3g_D Ribonuclease H, RNAse H1; hydrolase, cleave the RNA strand of RNA/DNA hybrid; 1.40A {Uncultured organism}
Probab=97.78 E-value=8.6e-06 Score=58.90 Aligned_cols=52 Identities=10% Similarity=0.203 Sum_probs=34.5
Q ss_pred hhHHhhcC-CCCHHHHHHHHHHHHHH-HHcCCeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 3 SLQAITSK-SCNNALLSKIYSTWLDL-VACGKEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 3 al~al~~~-~~~~~~i~~i~~~~~~l-~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
++..+... ...+.-+..++..+..+ ...-..|+|.|||. +|||.||+|||+|
T Consensus 81 vi~~i~~~~~~~~~~l~~~~~~i~~l~~~~~~~v~~~~V~~----~~N~~AD~LA~~a 134 (140)
T 3u3g_D 81 IVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPR----EKNARADELVNEA 134 (140)
T ss_dssp HHHHHTTSSCCCCGGGHHHHHHHHHHHHHHCTTCEEEECCG----GGGHHHHHHHHHH
T ss_pred HHHHhCCCcccCCHHHHHHHHHHHHHhhcCCCcEEEEEcCc----hhhHHHHHHHHHH
Confidence 34555553 22333334445555555 55556999999995 7999999999987
No 12
>2ehg_A Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, D stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii} PDB: 3aly_A
Probab=97.56 E-value=2.2e-05 Score=57.80 Aligned_cols=22 Identities=18% Similarity=0.543 Sum_probs=20.6
Q ss_pred eeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 33 EISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 33 ~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
.|.|.|||+| +||.||+|||+|
T Consensus 110 ~v~~~~V~~~----~N~~AD~LA~~a 131 (149)
T 2ehg_A 110 NATLIWVPRE----ENKEADRLSRVA 131 (149)
T ss_dssp TCEEEECCGG----GCHHHHHHHHHH
T ss_pred CEEEEEcCCc----ccHHHHHHHHHH
Confidence 4999999995 899999999998
No 13
>3alr_A Nanos protein; zinc-finger, translational repression, RNA, 3'-UTR, metal BI protein; 2.10A {Danio rerio}
Probab=65.89 E-value=3.4 Score=28.05 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=21.4
Q ss_pred CCcc-cCCCCccccc-ccCcccHHhhh
Q psy10817 144 PTCR-CGDILTVKHI-LTCPLDIQLRS 168 (199)
Q Consensus 144 ~~C~-Cg~~~t~~Hi-~~Cp~~~~~R~ 168 (199)
-.|+ ||+..+-.|. -.||+......
T Consensus 72 Y~CpiCGATGd~AHT~kYCP~~~~~~~ 98 (106)
T 3alr_A 72 YKCPLCGATGAKAHTKRFCPMVDKNYC 98 (106)
T ss_dssp CCCTTTCCCGGGCCCGGGCTTCGGGGC
T ss_pred ccCCCCCCcCCcccceecCCCCCCccC
Confidence 6799 9999999999 99999875543
No 14
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=46.88 E-value=16 Score=26.76 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=24.8
Q ss_pred HHHHHHcCCeeEEEEecCCCCCccchhhhhhhCC
Q psy10817 24 WLDLVACGKEISFMWCPSHCGISGNEAVDVAAKN 57 (199)
Q Consensus 24 ~~~l~~~~~~i~l~WvPgH~gi~gNE~AD~~Ak~ 57 (199)
...|.+.|..|.+.||||=-.||- .|.++|+.
T Consensus 35 ~~~l~~~G~~i~v~~VPGafEiP~--aa~~la~~ 66 (157)
T 2i0f_A 35 KAALDEAGATYDVVTVPGALEIPA--TISFALDG 66 (157)
T ss_dssp HHHHHHTTCEEEEEEESSGGGHHH--HHHHHHHH
T ss_pred HHHHHHcCCCeEEEECCcHHHHHH--HHHHHHhh
Confidence 345777888999999999988873 45777765
No 15
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=36.41 E-value=41 Score=29.75 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccchh
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGNEA 50 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~ 50 (199)
..+.+..+.++.++|..|-+-+||.|++-.+|..
T Consensus 192 ~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~ 225 (602)
T 2bhu_A 192 PEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYL 225 (602)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEecccccccCCccc
Confidence 4678888899999999999999999999887754
No 16
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=36.02 E-value=25 Score=25.77 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHHHHH-HHHHHHcCC-eeEEEEecCCCCCccchhhhhhhCC
Q psy10817 15 ALLSKIYST-WLDLVACGK-EISFMWCPSHCGISGNEAVDVAAKN 57 (199)
Q Consensus 15 ~~i~~i~~~-~~~l~~~~~-~i~l~WvPgH~gi~gNE~AD~~Ak~ 57 (199)
.|.....+- +..|.+.|. .|.+.||||=-.||- .|.++|+.
T Consensus 30 ~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~--aak~la~~ 72 (160)
T 2c92_A 30 KICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPV--VAQELARN 72 (160)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHH--HHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHH--HHHHHHhc
Confidence 334433332 345667777 899999999988884 56778763
No 17
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=30.97 E-value=50 Score=28.96 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
..+....+.++.++|..|-+-|||.|++-...
T Consensus 222 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 253 (588)
T 1j0h_A 222 KETLKTLIDRCHEKGIRVMLDAVFNHCGYEFA 253 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTCH
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcCcccch
Confidence 36778888889999999999999999987654
No 18
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=30.34 E-value=46 Score=29.14 Aligned_cols=31 Identities=16% Similarity=-0.030 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+.+..+.++.++|..|-+-|||.|++-..
T Consensus 219 ~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~ 249 (585)
T 1wzl_A 219 LPTFRRLVDEAHRRGIKIILDAVFNHAGDQF 249 (585)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEcCCcCCCcc
Confidence 3677888888999999999999999998654
No 19
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=28.94 E-value=64 Score=28.63 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccchhh
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGNEAV 51 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~A 51 (199)
..+.+..+.++.++|..|-+-+|+.|+|-.+|-..
T Consensus 202 ~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 236 (618)
T 3m07_A 202 PDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGNYLP 236 (618)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEeecCccCCCCccccc
Confidence 46778888889999999999999999998877543
No 20
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=28.11 E-value=56 Score=27.18 Aligned_cols=31 Identities=6% Similarity=-0.086 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+.+..+.++.++|..|-+-+||.|++-..
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 104 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTTFDY 104 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCSCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCCc
Confidence 4677888888999999999999999998654
No 21
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=27.91 E-value=45 Score=24.22 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=24.9
Q ss_pred HHHHHHcC----CeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 24 WLDLVACG----KEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 24 ~~~l~~~~----~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
...|.+.| ..|.+.||||=-.|| =.|.++|+.+
T Consensus 35 ~~~l~~~G~v~~~~i~v~~VPGafEiP--~aa~~la~~~ 71 (156)
T 3nq4_A 35 VDALTRIGQVKDDNITVVWVPGAYELP--LATEALAKSG 71 (156)
T ss_dssp HHHHHHTTCCCTTSEEEEEESSTTTHH--HHHHHHHHHC
T ss_pred HHHHHHcCCCcccceEEEEcCcHHHHH--HHHHHHHhcC
Confidence 34466677 379999999998888 4677777765
No 22
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=27.53 E-value=42 Score=24.38 Aligned_cols=32 Identities=13% Similarity=0.308 Sum_probs=24.3
Q ss_pred HHHHHcC--CeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 25 LDLVACG--KEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 25 ~~l~~~~--~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
..|.+.| ..|.+.||||=-.||- .|.++|+..
T Consensus 37 ~~l~~~Gv~~~i~v~~VPGafEiP~--aa~~la~~~ 70 (156)
T 1c2y_A 37 DTFKKYSVNEDIDVVWVPGAYELGV--TAQALGKSG 70 (156)
T ss_dssp HHHHHTTCCSCCEEEEESSHHHHHH--HHHHHHHTT
T ss_pred HHHHHcCCCCceEEEECCcHHHHHH--HHHHHHhcC
Confidence 4466777 4799999999987872 567788765
No 23
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=26.96 E-value=66 Score=27.12 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
..+.+..+.++.++|..|-+-+||.|++-.+.
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 128 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMGYDGA 128 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCEEBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCCCCCC
Confidence 46788888999999999999999999987543
No 24
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=26.63 E-value=46 Score=24.14 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=24.2
Q ss_pred HHHHHcC---CeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 25 LDLVACG---KEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 25 ~~l~~~~---~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
..|.+.| .+|.+.||||=-.||- .|.++|+..
T Consensus 36 ~~l~~~gv~~~~i~v~~VPGafEiP~--aa~~la~~~ 70 (154)
T 1rvv_A 36 DALLRHGVDTNDIDVAWVPGAFEIPF--AAKKMAETK 70 (154)
T ss_dssp HHHHHTTCCGGGEEEEEESSGGGHHH--HHHHHHHTS
T ss_pred HHHHHcCCCccceEEEECCcHHHHHH--HHHHHHhcC
Confidence 4466677 4689999999988883 557788765
No 25
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=26.60 E-value=76 Score=27.62 Aligned_cols=34 Identities=15% Similarity=0.011 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccchh
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGNEA 50 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gNE~ 50 (199)
..+.+..+.++.++|..|-+-+|+.|++-.++-.
T Consensus 167 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~ 200 (558)
T 3vgf_A 167 PEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYM 200 (558)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCG
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCCCCcc
Confidence 4678888999999999999999999998776643
No 26
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=26.51 E-value=74 Score=23.06 Aligned_cols=30 Identities=13% Similarity=0.126 Sum_probs=21.9
Q ss_pred HHHcC---CeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 27 LVACG---KEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 27 l~~~~---~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
|.+.| ..|.+.||||=-.||- .|.++|+..
T Consensus 37 l~~~Gv~~~~i~v~~VPGafEiP~--aa~~la~~~ 69 (157)
T 2obx_A 37 MADIGGDRFAVDVFDVPGAYEIPL--HARTLAETG 69 (157)
T ss_dssp HHHHHTTSEEEEEEEESSGGGHHH--HHHHHHHHT
T ss_pred HHHcCCCccceEEEECCcHHHHHH--HHHHHHhcC
Confidence 44445 3689999999988883 557777665
No 27
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=26.50 E-value=42 Score=29.40 Aligned_cols=31 Identities=10% Similarity=-0.140 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+....+.++.++|..|-+-|||.|++-..
T Consensus 218 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 248 (583)
T 1ea9_C 218 KDTLKKLVDLCHERGIRVLLDAVFNHSGRTF 248 (583)
T ss_dssp HHHHHHHHHHHTTTTCEEEEECCCSBCCTTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccccCCCcc
Confidence 3677888888999999999999999998654
No 28
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=26.48 E-value=46 Score=24.10 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=24.4
Q ss_pred HHHHHcC---CeeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 25 LDLVACG---KEISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 25 ~~l~~~~---~~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
..|.+.| .+|.+.||||=-.||- .|.++|+..
T Consensus 36 ~~l~~~gv~~~~i~v~~VPGafEiP~--aa~~la~~~ 70 (154)
T 1hqk_A 36 DCIVRHGGREEDITLVRVPGSWEIPV--AAGELARKE 70 (154)
T ss_dssp HHHHHTTCCGGGEEEEEESSGGGHHH--HHHHHHTCT
T ss_pred HHHHHcCCCccceEEEECCcHHHHHH--HHHHHHhcC
Confidence 4466777 4689999999988883 567788775
No 29
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=26.46 E-value=65 Score=28.51 Aligned_cols=29 Identities=7% Similarity=-0.056 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHcCCeeEEEEecCCCCCc
Q psy10817 18 SKIYSTWLDLVACGKEISFMWCPSHCGIS 46 (199)
Q Consensus 18 ~~i~~~~~~l~~~~~~i~l~WvPgH~gi~ 46 (199)
.+...++.++.++|..|-+-|||.|+|-.
T Consensus 286 ~df~~LV~~aH~~GI~VIlD~V~NHts~~ 314 (645)
T 4aef_A 286 RAFVDLLSELKRFDIKVILDGVFHHTSFF 314 (645)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHhhhcCCEEEEEecccccccC
Confidence 46677888899999999999999999865
No 30
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=26.17 E-value=16 Score=17.62 Aligned_cols=13 Identities=31% Similarity=0.210 Sum_probs=8.9
Q ss_pred CccchhhhhhhCC
Q psy10817 45 ISGNEAVDVAAKN 57 (199)
Q Consensus 45 i~gNE~AD~~Ak~ 57 (199)
|+.-+.||++||.
T Consensus 4 ipsydfadelakl 16 (26)
T 1sn9_A 4 IPSYDFADELAKL 16 (26)
T ss_dssp BTTBCHHHHHHHH
T ss_pred CCccchHHHHHHH
Confidence 4555678888874
No 31
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.44 E-value=76 Score=26.21 Aligned_cols=31 Identities=13% Similarity=-0.120 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+.++.+.++.++|..|-+-+||.|++-..
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~ 98 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRCADY 98 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCCSE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCcccCCC
Confidence 4677888888999999999999999998753
No 32
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.37 E-value=73 Score=27.11 Aligned_cols=30 Identities=7% Similarity=-0.048 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGIS 46 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~ 46 (199)
..+.+.++.++.++|..|-+=+||-|+|-.
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NHts~~ 108 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNHTSDQ 108 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccCCcCC
Confidence 357788888899999999999999999865
No 33
>2job_A Antilipopolysaccharide factor; ALF, lipid A binding protein, endotoxin, lipid binding protein; NMR {Penaeus monodon}
Probab=25.35 E-value=23 Score=23.84 Aligned_cols=14 Identities=43% Similarity=1.078 Sum_probs=11.9
Q ss_pred EEEecCCCCCccch
Q psy10817 36 FMWCPSHCGISGNE 49 (199)
Q Consensus 36 l~WvPgH~gi~gNE 49 (199)
-+||||=+-|.|+-
T Consensus 52 ~mWCPgWT~i~Ges 65 (102)
T 2job_A 52 RMWCPGWTAIRGEA 65 (102)
T ss_dssp EEECBTTBSCEEEE
T ss_pred EEecCCccceeccc
Confidence 38999999999863
No 34
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=25.32 E-value=80 Score=22.90 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=22.7
Q ss_pred HHHHcCC---eeEEEEecCCCCCccchhhhhhhCCC
Q psy10817 26 DLVACGK---EISFMWCPSHCGISGNEAVDVAAKNP 58 (199)
Q Consensus 26 ~l~~~~~---~i~l~WvPgH~gi~gNE~AD~~Ak~a 58 (199)
.|.+.|. +|.+.||||=-.||- .|.++|+..
T Consensus 35 ~l~~~gv~~~~i~v~~VPGafEiP~--aa~~la~~~ 68 (158)
T 1di0_A 35 ELAAKTGGSVEVEIFDVPGAYEIPL--HAKTLARTG 68 (158)
T ss_dssp HHHHHHTTSEEEEEEEESSGGGHHH--HHHHHHHTS
T ss_pred HHHHcCCCccceEEEECCcHHHHHH--HHHHHHhcC
Confidence 3445553 699999999988883 567788765
No 35
>2x5c_A Hypothetical protein ORF131; viral protein; HET: GOL; 1.80A {Pyrobaculum spherical virus}
Probab=25.28 E-value=8.9 Score=25.55 Aligned_cols=29 Identities=31% Similarity=0.486 Sum_probs=21.4
Q ss_pred hhhhhccccccccccccccCCCCCCCcc-cCCCCccccc
Q psy10817 120 VVLTRMRIGHTRLTHSYLFSRSPQPTCR-CGDILTVKHI 157 (199)
Q Consensus 120 ~~L~qlrTGH~~l~h~~l~~~~~~~~C~-Cg~~~t~~Hi 157 (199)
.-|.|++-|-+-|-| ..|+ ||...++.-+
T Consensus 38 adlvrmlrglgvfmh---------akcprcgaegsvsiv 67 (131)
T 2x5c_A 38 ADLVRMLRGLGVFMH---------AKCPRCGAEGSVSIV 67 (131)
T ss_dssp HHHHHHHHHHTCCCE---------EECTTTSCEEEEEEE
T ss_pred HHHHHHHhcchheee---------ccCCCCCCccceEEE
Confidence 456777777666654 6799 9998888766
No 36
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.99 E-value=23 Score=20.53 Aligned_cols=18 Identities=28% Similarity=0.770 Sum_probs=9.4
Q ss_pred CCcc-cCC-CCccccc--ccCc
Q psy10817 144 PTCR-CGD-ILTVKHI--LTCP 161 (199)
Q Consensus 144 ~~C~-Cg~-~~t~~Hi--~~Cp 161 (199)
..|| ||. .--..|. +.|+
T Consensus 20 k~CP~CG~~~fm~~~~~R~~C~ 41 (50)
T 3j20_Y 20 KFCPRCGPGVFMADHGDRWACG 41 (50)
T ss_dssp EECSSSCSSCEEEECSSEEECS
T ss_pred ccCCCCCCceEEecCCCeEECC
Confidence 4466 765 3334444 5555
No 37
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=23.96 E-value=83 Score=26.31 Aligned_cols=31 Identities=10% Similarity=-0.078 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+..+++.++.++|..|-+-+||-|++-..
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 116 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHRAGGD 116 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCCCE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccccCCC
Confidence 4677888889999999999999999998653
No 38
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=23.82 E-value=53 Score=24.18 Aligned_cols=30 Identities=10% Similarity=0.096 Sum_probs=22.5
Q ss_pred HHHHHcC---CeeEEEEecCCCCCccchhhhhhhC
Q psy10817 25 LDLVACG---KEISFMWCPSHCGISGNEAVDVAAK 56 (199)
Q Consensus 25 ~~l~~~~---~~i~l~WvPgH~gi~gNE~AD~~Ak 56 (199)
..|.+.| ..|.+.||||=-.||- .|.++|+
T Consensus 40 ~~L~~~Gv~~~~i~v~~VPGafEiP~--aak~la~ 72 (168)
T 1ejb_A 40 ERMASLGVEENNIIIETVPGSYELPW--GTKRFVD 72 (168)
T ss_dssp HHHHHTTCCGGGEEEEECSSGGGHHH--HHHHHHH
T ss_pred HHHHHcCCCccceEEEECCcHHHHHH--HHHHHHh
Confidence 4466677 4689999999988883 5577776
No 39
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=23.79 E-value=41 Score=21.72 Aligned_cols=24 Identities=29% Similarity=0.566 Sum_probs=18.8
Q ss_pred CCCCCcc-cCCCCcccccccCcccH
Q psy10817 141 SPQPTCR-CGDILTVKHILTCPLDI 164 (199)
Q Consensus 141 ~~~~~C~-Cg~~~t~~Hi~~Cp~~~ 164 (199)
.....|. |.++.--.||..||.-.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~ 37 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVP 37 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCS
T ss_pred CCeeEeecchhhhccCceeeCCCcc
Confidence 4456788 99987788999999743
No 40
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=23.23 E-value=1.1e+02 Score=27.60 Aligned_cols=33 Identities=12% Similarity=-0.030 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 16 LLSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 16 ~i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
.+.+.+..+.++.++|..|-+-+|+.|++-.++
T Consensus 314 ~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~ 346 (718)
T 2e8y_A 314 RKTELKQMINTLHQHGLRVILDVVFNHVYKREN 346 (718)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCCSSGGG
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEecccccCccc
Confidence 468899999999999999999999999998765
No 41
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=22.27 E-value=90 Score=27.16 Aligned_cols=30 Identities=7% Similarity=-0.033 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGIS 46 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~ 46 (199)
..+...++.++.++|..|-+-+||.|++-.
T Consensus 92 ~~df~~lv~~aH~~Gi~VilD~V~NH~s~~ 121 (570)
T 1m53_A 92 MEDFDSLVAEMKKRNMRLMIDVVINHTSDQ 121 (570)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 357778888899999999999999999864
No 42
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=22.14 E-value=91 Score=27.01 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGIS 46 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~ 46 (199)
..+...++.++..+|..|-+-+||.|++..
T Consensus 79 ~~df~~Lv~~aH~~Gi~VilD~V~NHts~~ 108 (557)
T 1zja_A 79 MEDFDRLMAELKKRGMRLMVDVVINHSSDQ 108 (557)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 467788888899999999999999999864
No 43
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.79 E-value=94 Score=26.72 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
..+.+.++.++.++|..|-+-+||-|++-...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~ 123 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRGYP 123 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcCCCCC
Confidence 46788889999999999999999999987644
No 44
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=21.73 E-value=91 Score=28.35 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+.+..+.++.++|..|-+-|||.|.+-.+
T Consensus 312 ~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~ 342 (722)
T 3k1d_A 312 PDDFRALVDALHQAGIGVIVDWVPAHFPKDA 342 (722)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCCCCT
T ss_pred HHHHHHHHHHHHHcCCEEEEEEEeeccCCcc
Confidence 4677888888999999999999999987654
No 45
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=21.59 E-value=78 Score=26.78 Aligned_cols=29 Identities=17% Similarity=0.020 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCC
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGI 45 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi 45 (199)
..+...++.++.++|..|-+-+||-|++-
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~~~ 110 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHKGG 110 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccCC
Confidence 46778888889999999999999999974
No 46
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=21.52 E-value=74 Score=29.58 Aligned_cols=28 Identities=14% Similarity=0.228 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCC
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCG 44 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~g 44 (199)
..+...++.+++.+|..|-+-|||.|++
T Consensus 692 ~~df~~lv~~~H~~GI~VilD~V~NH~~ 719 (844)
T 3aie_A 692 ADDLVKAIKALHSKGIKVMADWVPDQMY 719 (844)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 4677888899999999999999999986
No 47
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=21.48 E-value=29 Score=24.57 Aligned_cols=23 Identities=35% Similarity=0.642 Sum_probs=15.7
Q ss_pred CCCCCcc-cCCCCccccc--ccCccc
Q psy10817 141 SPQPTCR-CGDILTVKHI--LTCPLD 163 (199)
Q Consensus 141 ~~~~~C~-Cg~~~t~~Hi--~~Cp~~ 163 (199)
..-|.|| |+.+-+-+.= +.||--
T Consensus 25 ~~lP~CP~C~seytYeDg~l~vCPeC 50 (138)
T 2akl_A 25 STLPPCPQCNSEYTYEDGALLVCPEC 50 (138)
T ss_dssp CCSCCCTTTCCCCCEECSSSEEETTT
T ss_pred ccCCCCCCCCCcceEecCCeEECCcc
Confidence 3459999 9985555443 888853
No 48
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=21.42 E-value=78 Score=27.13 Aligned_cols=29 Identities=14% Similarity=-0.011 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCC
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGI 45 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi 45 (199)
..+...++.++.++|..|-+-+||-|++-
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 109 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHKGG 109 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCccC
Confidence 46778888889999999999999999974
No 49
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=21.34 E-value=1.1e+02 Score=26.98 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
..+.+..+.++.++|..|-+-|||.|++-.++
T Consensus 204 ~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~ 235 (617)
T 1m7x_A 204 RDDFRYFIDAAHAAGLNVILDWVPGHFPTDDF 235 (617)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTSCCCSTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCcccCccc
Confidence 56778888899999999999999999976543
No 50
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=21.24 E-value=1e+02 Score=28.05 Aligned_cols=31 Identities=16% Similarity=0.081 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
+.+-+..+.++.++|..|-+-+||.|++-.+
T Consensus 378 ~~efk~LV~~aH~~GIkVIlDvV~NHts~~h 408 (884)
T 4aio_A 378 IIEYRQMVQALNRIGLRVVMDVVYNHLDSSG 408 (884)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCSCCS
T ss_pred HHHHHHHHHHHHhcCCceeeeeccccccCCC
Confidence 5778889999999999999999999998654
No 51
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=20.55 E-value=84 Score=26.51 Aligned_cols=29 Identities=7% Similarity=-0.228 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCC
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGI 45 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi 45 (199)
..+...++.++.++|..|-+-+||-|++-
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 108 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHKMG 108 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcccc
Confidence 46778888889999999999999999964
No 52
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=20.34 E-value=1.1e+02 Score=25.52 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCcc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISG 47 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~g 47 (199)
..+....+.++.++|..|-+-+||-|++-..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~ 99 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGFLH 99 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccCch
Confidence 4677888888999999999999999999764
No 53
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=20.31 E-value=86 Score=26.49 Aligned_cols=29 Identities=10% Similarity=-0.143 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCC
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGI 45 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi 45 (199)
..+.+.++.++.++|..|-+-+||-|++-
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 106 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHKAG 106 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcccC
Confidence 46778888889999999999999999974
No 54
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=20.07 E-value=1.4e+02 Score=27.92 Aligned_cols=32 Identities=6% Similarity=-0.150 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHcCCeeEEEEecCCCCCccc
Q psy10817 17 LSKIYSTWLDLVACGKEISFMWCPSHCGISGN 48 (199)
Q Consensus 17 i~~i~~~~~~l~~~~~~i~l~WvPgH~gi~gN 48 (199)
+.+.+..+.++.++|..|-|-||+.|++-.++
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV~NHt~~~~~ 562 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVVYNHTFDVMV 562 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCSSS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcccccccccc
Confidence 68889999999999999999999999988764
No 55
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.03 E-value=27 Score=20.20 Aligned_cols=22 Identities=23% Similarity=0.526 Sum_probs=16.0
Q ss_pred CCCCcc-cCCC-----Cccccc-ccCccc
Q psy10817 142 PQPTCR-CGDI-----LTVKHI-LTCPLD 163 (199)
Q Consensus 142 ~~~~C~-Cg~~-----~t~~Hi-~~Cp~~ 163 (199)
.+-.|+ |+.. .-..|. ++||-.
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~ 39 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYCCPEM 39 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred CceeCCcccccccchHHHHhhhhhcCcch
Confidence 456799 9962 246799 999963
Done!