Query psy10819
Match_columns 173
No_of_seqs 135 out of 1024
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 19:18:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10819.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10819hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 smart00325 RhoGEF Guanine nucl 100.0 5.6E-33 1.2E-37 203.2 14.3 146 1-172 5-150 (180)
2 cd00160 RhoGEF Guanine nucleot 100.0 2.5E-31 5.4E-36 194.6 14.0 144 1-172 8-152 (181)
3 KOG4424|consensus 100.0 2.1E-31 4.5E-36 216.3 11.7 137 1-173 74-212 (623)
4 PF00621 RhoGEF: RhoGEF domain 100.0 2E-28 4.3E-33 178.4 13.1 145 1-172 5-150 (180)
5 KOG3523|consensus 99.9 9.8E-27 2.1E-31 189.9 11.0 145 1-173 265-411 (695)
6 KOG4305|consensus 99.9 2E-26 4.4E-31 199.2 10.2 144 1-172 343-491 (1029)
7 KOG3520|consensus 99.9 1.4E-25 3E-30 194.8 12.0 145 1-172 398-549 (1167)
8 KOG3518|consensus 99.9 3.1E-25 6.7E-30 171.1 10.6 143 1-172 129-271 (521)
9 KOG3521|consensus 99.9 1.9E-22 4.1E-27 166.3 11.2 153 1-172 185-339 (846)
10 KOG2996|consensus 99.9 3.1E-22 6.7E-27 163.3 10.4 139 2-171 206-345 (865)
11 KOG3519|consensus 99.8 1.4E-20 3E-25 163.2 9.8 146 1-172 344-491 (756)
12 KOG4240|consensus 99.7 4.1E-18 8.9E-23 147.6 8.6 139 1-171 640-779 (1025)
13 KOG2070|consensus 99.7 2E-17 4.3E-22 133.1 8.4 140 1-171 109-249 (661)
14 KOG3522|consensus 99.7 5.7E-17 1.2E-21 137.3 9.2 125 1-170 8-135 (925)
15 COG5422 ROM1 RhoGEF, Guanine n 99.7 6.1E-17 1.3E-21 137.5 5.4 147 2-172 493-640 (1175)
16 KOG0689|consensus 99.6 3.8E-17 8.1E-22 132.6 -2.4 138 1-172 70-209 (448)
17 KOG3524|consensus 99.5 5.3E-14 1.1E-18 117.5 6.7 139 2-172 393-532 (850)
18 KOG3531|consensus 99.5 9.1E-15 2E-19 123.9 0.8 151 1-172 541-692 (1036)
19 KOG4269|consensus 97.9 2.1E-06 4.5E-11 74.6 -1.1 143 2-168 341-492 (1112)
20 KOG3524|consensus 97.3 0.00078 1.7E-08 57.8 6.4 131 1-164 402-534 (850)
21 PF12210 Hrs_helical: Hepatocy 91.9 0.67 1.5E-05 30.1 5.2 54 7-63 2-55 (96)
22 PF00611 FCH: Fes/CIP4, and EF 44.4 52 0.0011 20.3 4.0 54 3-59 37-90 (91)
23 cd07658 F-BAR_NOSTRIN The F-BA 36.4 1.2E+02 0.0026 23.1 5.5 55 3-62 33-87 (239)
24 PF06135 DUF965: Bacterial pro 32.4 30 0.00066 21.7 1.4 29 111-139 48-76 (79)
25 cd07676 F-BAR_FBP17 The F-BAR 30.8 1.5E+02 0.0032 23.0 5.2 61 3-64 33-94 (253)
26 cd07680 F-BAR_PACSIN1 The F-BA 29.2 1.5E+02 0.0033 23.0 5.1 57 3-62 33-89 (258)
27 cd07655 F-BAR_PACSIN The F-BAR 28.9 2.1E+02 0.0046 22.0 5.9 59 3-64 33-91 (258)
28 PRK05473 hypothetical protein; 28.6 35 0.00076 21.8 1.2 30 111-140 51-80 (86)
29 PF10454 DUF2458: Protein of u 28.2 1.1E+02 0.0024 21.7 3.8 31 112-142 3-34 (150)
30 PF05290 Baculo_IE-1: Baculovi 27.6 1.7E+02 0.0036 20.5 4.4 48 7-64 19-66 (140)
31 COG4359 Uncharacterized conser 24.7 1.1E+02 0.0023 22.9 3.2 33 112-144 56-89 (220)
32 cd07649 F-BAR_GAS7 The F-BAR ( 24.2 2.1E+02 0.0045 21.9 4.9 54 3-63 33-86 (233)
33 COG4472 Uncharacterized protei 23.6 51 0.0011 20.8 1.2 32 111-142 51-82 (88)
34 cd07648 F-BAR_FCHO The F-BAR ( 20.7 2.9E+02 0.0064 21.1 5.3 55 3-64 33-87 (261)
35 cd07681 F-BAR_PACSIN3 The F-BA 20.6 3.7E+02 0.008 21.0 5.7 56 3-62 33-89 (258)
No 1
>smart00325 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases. Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains. Improved coverage.
Probab=100.00 E-value=5.6e-33 Score=203.15 Aligned_cols=146 Identities=30% Similarity=0.561 Sum_probs=134.2
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|++||++||++|+.+.+.|..|+.... +.++..+++.||+|+++|+.+|+.|+.+|+++...|....
T Consensus 5 li~tE~~Yv~~L~~l~~~y~~~l~~~~----~~~~~~~~~~iF~~i~~i~~~h~~~l~~l~~~~~~~~~~~--------- 71 (180)
T smart00325 5 LLQTERNYVRDLKLLVEVFLKPLKKEL----KLLSPNELETLFGNIEEIYEFHRDFLDELEERIEEWDDSP--------- 71 (180)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh----CCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcccccc---------
Confidence 579999999999999999999999764 2688999999999999999999999999999998884211
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFPMH 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~PvQ 160 (173)
..+|++|.++.+.++.|..||.+++.+...+.++++++.|..|+++++..+.++++++.++|++|||
T Consensus 72 -------------~~i~~~f~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~~~~~~l~~~L~~Pvq 138 (180)
T smart00325 72 -------------ERIGDVFLKLEEFFKIYSEYCSNHPDALELLKKLKKNPRFQKFLKEIESSPQCRRLTLESLLLKPVQ 138 (180)
T ss_pred -------------cHHHHHHHHhhHHHHHHHHHHHhHHHHHHHHHHhhcChhHHHHHHHHhCChhhccCCHHHHHhHHHH
Confidence 2699999999999999999999999999999997789999999999999998888999999999999
Q ss_pred hccchhhhhccc
Q psy10819 161 QNAKKNFKKESY 172 (173)
Q Consensus 161 Ri~rY~LLLe~~ 172 (173)
|++||+|||+++
T Consensus 139 Rl~rY~lll~~l 150 (180)
T smart00325 139 RLTKYPLLLKEL 150 (180)
T ss_pred HhccHHHHHHHH
Confidence 999999999874
No 2
>cd00160 RhoGEF Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
Probab=99.97 E-value=2.5e-31 Score=194.60 Aligned_cols=144 Identities=31% Similarity=0.536 Sum_probs=130.6
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|++||++||++|+.+.+.|..|+...... ++..++..||+|+++|+.+|+.|+.+|+.+...|....
T Consensus 8 li~tE~~Yv~~L~~l~~~y~~~l~~~~~~----~~~~~~~~iF~~i~~i~~~h~~~l~~l~~~~~~~~~~~--------- 74 (181)
T cd00160 8 LLQTERNYVRDLKLLVEVFLKPLDKELLP----LSPEEVELLFGNIEEIYEFHRIFLKSLEERVEEWDKSG--------- 74 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCC----CCHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhccCccc---------
Confidence 57999999999999999999999876421 78999999999999999999999999999998886211
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHh-cChhHHHHHHHHhcCccccCCChhHhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECK-QQPEFVQLLKRLEMKPACQGRSLEMFLTFPM 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~~l~~~~~~~~~~~l~l~~~L~~Pv 159 (173)
..+|++|.++.+.+++|..||.+++.+...+.+++ .++.|++|++.++. .++++++.++|++||
T Consensus 75 -------------~~i~~~f~~~~~~~~~Y~~Y~~~~~~~~~~l~~~~~~~~~f~~~~~~~~~--~~~~~~l~~~L~~Pv 139 (181)
T cd00160 75 -------------PRIGDVFLKLAPFFKIYSEYCSNHPDALELLKKLKKFNKFFQEFLEKAES--ECGRLKLESLLLKPV 139 (181)
T ss_pred -------------chHHHHHHHhhhHHHHHHHHHhChHHHHHHHHHHHHccHHHHHHHHHHHH--hcccCCHHHHhhhhH
Confidence 26999999999999999999999999999999776 69999999999987 677899999999999
Q ss_pred hhccchhhhhccc
Q psy10819 160 HQNAKKNFKKESY 172 (173)
Q Consensus 160 QRi~rY~LLLe~~ 172 (173)
||++||+|||+++
T Consensus 140 QRl~rY~lLL~~l 152 (181)
T cd00160 140 QRLTKYPLLLKEL 152 (181)
T ss_pred HHhchHHHHHHHH
Confidence 9999999999874
No 3
>KOG4424|consensus
Probab=99.97 E-value=2.1e-31 Score=216.32 Aligned_cols=137 Identities=23% Similarity=0.517 Sum_probs=127.1
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHH-HHHHHHHHHhcCCCcccccCCCCc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQI-FLKGLTSRMESWPTLVLVDFSIPY 79 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~-fl~~L~~~~~~~~~~~~~~~~~~~ 79 (173)
|+.||++||+.|..|.++|+.+|.... .++.+.+..||+|+..|+.+|.+ |+..++.+
T Consensus 74 ll~tE~~Yv~~L~lLd~~F~~~L~~~~-----~~~~~~v~~lf~nIssi~~fh~qfllp~l~~r---------------- 132 (623)
T KOG4424|consen 74 LLDTERTYVKRLHLLDQVFCRRLLEEA-----SIPADVITGLFGNISSIHNFHGQFLLPELEKR---------------- 132 (623)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhh----------------
Confidence 578999999999999999999998776 56789999999999999999966 56666665
Q ss_pred chhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHh-cChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 80 SYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECK-QQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
.||+||.+.+|++|+|++|+.||+.|.+++..+. ++|.|+.+++++++++.|++++|+++++.|
T Consensus 133 ---------------~Iadv~qKlAPFLKmYseY~knydrA~~L~~~lt~rsp~F~~vl~~Iek~~~cg~l~LqhhMieP 197 (623)
T KOG4424|consen 133 ---------------IIADVFQKLAPFLKMYSEYAKNYDRALKLFQTLTSRSPQFRKVVEEIEKQPECGGLKLQHHMIEP 197 (623)
T ss_pred ---------------HHHHHHHHhhhHHHHHHHHHhcchhHHHHHHHHHhhChHHHHHHHHHhhchhcCCccchhheech
Confidence 3999999999999999999999999999999876 589999999999999999999999999999
Q ss_pred hhhccchhhhhcccC
Q psy10819 159 MHQNAKKNFKKESYF 173 (173)
Q Consensus 159 vQRi~rY~LLLe~~~ 173 (173)
|||||||.|||++|.
T Consensus 198 VQRIPRYeLLLk~yl 212 (623)
T KOG4424|consen 198 VQRVPRYELLLQDYL 212 (623)
T ss_pred hhhhhHHHHHHHHHH
Confidence 999999999999883
No 4
>PF00621 RhoGEF: RhoGEF domain; InterPro: IPR000219 The Rho family GTPases Rho, Rac and CDC42 regulate a diverse array of cellular processes. Like all members of the Ras superfamily, the Rho proteins cycle between active GTP-bound and inactive GDP-bound conformational states. Activation of Rho proteins through release of bound GDP and subsequent binding of GTP, is catalysed by guanine nucleotide exchange factors (GEFs) in the Dbl family. The proteins encoded by members of the Dbl family share a common domain, presented in this entry, of about 200 residues (designated the Dbl homology or DH domain) that has been shown to encode a GEF activity specific for a number of Rho family members. In addition, all family members possess a second, shared domain designated the pleckstrin homology (PH) domain (IPR001849 from INTERPRO). Trio and its homologue UNC-73 are unique within the Dbl family insomuch as they encode two distinct DH/PH domain modules. The PH domain is invariably located immediately C-terminal to the DH domain and this invariant topography suggests a functional interdependence between these two structural modules. Biochemical data have established the role of the conserved DH domain in Rho GTPase interaction and activation, and the role of the tandem PH domain in intracellular targeting and/or regulation of DH domain function. The DH domain of Dbl has been shown to mediate oligomerisation that is mostly homophilic in nature. In addition to the tandem DH/PH domains Dbl family GEFs contain diverse structural motifs like serine/threonine kinase, RBD, PDZ, RGS, IQ, REM, Cdc25, RasGEF, CH, SH2, SH3, EF, spectrin or Ig. The DH domain is composed of three structurally conserved regions separated by more variable regions. It does not share significant sequence homology with other subtypes of small G-protein GEF motifs such as the Cdc25 domain and the Sec7 domain, which specifically interact with Ras and ARF family small GTPases, respectively, nor with other Rho protein interactive motifs, indicating that the Dbl family proteins are evolutionarily unique. The DH domain is composed of 11 alpha helices that are folded into a flattened, elongated alpha-helix bundle in which two of the three conserved regions, conserved region 1 (CR1) and conserved region 3 (CR3), are exposed near the centre of one surface. CR1 and CR3, together with a part of alpha-6 and the DH/PH junction site, constitute the Rho GTPase interacting pocket.; GO: 0005089 Rho guanyl-nucleotide exchange factor activity, 0035023 regulation of Rho protein signal transduction, 0005622 intracellular; PDB: 3MPX_A 2RGN_E 2Z0Q_A 3T06_A 3KZ1_A 1XCG_E 2KR9_A 1BY1_A 1RJ2_J 1KZG_C ....
Probab=99.96 E-value=2e-28 Score=178.42 Aligned_cols=145 Identities=29% Similarity=0.574 Sum_probs=131.6
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|++||+.|+++|+.+.+.|..|+... .+.++..++..+|+|+++|+++|+.|+..|+.+.+.|....
T Consensus 5 Li~tE~~y~~~L~~l~~~~~~~l~~~----~~~l~~~~~~~lf~~i~~l~~~h~~ll~~L~~~~~~~~~~~--------- 71 (180)
T PF00621_consen 5 LIETERSYVEDLEILVEVFLKPLRKR----SPLLSEDEIKSLFGNIEELIEIHQQLLESLEERMKEWSNIQ--------- 71 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHH----TTSSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSSGG---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----cccCCHHHHHHHhcchhhhhhHHHHHHHHHHHHHHhhhccc---------
Confidence 58999999999999999999999874 24788899999999999999999999999999887775532
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhc-ChhHHHHHHHHhcCccccCCChhHhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQ-QPEFVQLLKRLEMKPACQGRSLEMFLTFPM 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~-~~~f~~~l~~~~~~~~~~~l~l~~~L~~Pv 159 (173)
.||++|.+..+.+.+|..||.+++.+...++++++ +..|..|++.++..+.++++++.++|.+|+
T Consensus 72 --------------~i~~if~~~~~~~~~Y~~Y~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~Pi 137 (180)
T PF00621_consen 72 --------------SIGDIFLKFEPFLKVYISYCSNYPDALSLLEELRKKNSEFKKFLEEIENSPESKRLSLSSLLIKPI 137 (180)
T ss_dssp --------------GHHHHHHHHTTGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHCTTSTHHHHTTHHH
T ss_pred --------------hhhhhhhhccccccceeccchheechhhhhhHHHhhccccccccccccccccccCCCHHHHHHHhh
Confidence 69999999888889999999999999999998764 667999999999988889999999999999
Q ss_pred hhccchhhhhccc
Q psy10819 160 HQNAKKNFKKESY 172 (173)
Q Consensus 160 QRi~rY~LLLe~~ 172 (173)
||++||+++|+++
T Consensus 138 qrl~rY~lll~~l 150 (180)
T PF00621_consen 138 QRLPRYPLLLKRL 150 (180)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999999999864
No 5
>KOG3523|consensus
Probab=99.94 E-value=9.8e-27 Score=189.94 Aligned_cols=145 Identities=25% Similarity=0.446 Sum_probs=130.4
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
+|++|.+|++.|++++++|+..- ..+ ..++..+...+|+|+-++.++++.||.+|+.+.+...-.
T Consensus 265 viTSEaSYl~SLnllv~hF~~s~--~l~---~~Ls~~d~~~LFSni~~V~~~Serfl~dLE~r~e~ni~i---------- 329 (695)
T KOG3523|consen 265 VITSEASYLRSLNLLVDHFMNSK--ELR---STLSASDRHHLFSNIQDVREVSERFLCDLEARLEENIFI---------- 329 (695)
T ss_pred eehhhHHHHHHHHHHHHHHhhhH--HHH---HhcChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCchh----------
Confidence 58999999999999999998872 222 278999999999999999999999999999998764442
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCc-hhhhHHHHHhcHHHHHHHHHHHh-cChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLP-MLGIYQEYVRNHHYSLQVLTECK-QQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~-~~~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
..|.||...+++ .|.+|..||.|..+...+++++. +|+.|++.+++++..|.|+|++|.+|||.|
T Consensus 330 -------------~dicDiv~~ha~~~f~vYv~Y~tNQ~YQeRT~qrL~~~n~~F~e~l~rLE~~p~C~~Lpl~SFLiLP 396 (695)
T KOG3523|consen 330 -------------DDICDIVEDHAAKHFSVYVKYCTNQVYQERTLQRLLTENPAFREVLERLESSPKCQGLPLRSFLILP 396 (695)
T ss_pred -------------hHHHHHHHHhcccccceeehhccchHHHHHHHHHHHhcChHHHHHHHHHhcCccccCCCchhhhhch
Confidence 258999988876 77899999999999999999886 699999999999999999999999999999
Q ss_pred hhhccchhhhhcccC
Q psy10819 159 MHQNAKKNFKKESYF 173 (173)
Q Consensus 159 vQRi~rY~LLLe~~~ 173 (173)
||||||+|||++.++
T Consensus 397 mQRITRL~LLl~nIl 411 (695)
T KOG3523|consen 397 MQRITRLPLLLDNIL 411 (695)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 6
>KOG4305|consensus
Probab=99.93 E-value=2e-26 Score=199.16 Aligned_cols=144 Identities=22% Similarity=0.379 Sum_probs=132.3
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHh----HhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCC
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHED----VNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFS 76 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~----~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~ 76 (173)
|+-||+.||++|+.+.+.|++|+.+.. +++++. +..+|+|+++|+.+|..||.+|..+.+..+..
T Consensus 343 li~tE~d~v~dLel~re~y~kpl~~S~-----iipE~~~~~Fi~~vF~n~~~ii~ln~~LL~aL~~r~k~~G~V------ 411 (1029)
T KOG4305|consen 343 LIYTEEDFVADLELAREIYRKPLLESS-----IIPEQERAEFIAHVFGNIEEIIQLNEKLLKALRVRQKLSGVV------ 411 (1029)
T ss_pred EEeehhHHHHHHHHHHHHHhChHhhhc-----cCccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccCCcc------
Confidence 467999999999999999999988763 677777 99999999999999999999999987655432
Q ss_pred CCcchhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHH-HHhcChhHHHHHHHHhcCccccCCChhHhh
Q psy10819 77 IPYSYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLT-ECKQQPEFVQLLKRLEMKPACQGRSLEMFL 155 (173)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~-~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L 155 (173)
.+|||||.++++.++.|..||++.+.|...++ ++++||.|++|+++|+..+.|++++|.+||
T Consensus 412 -----------------~~IGdIll~~lp~~~~yi~Y~a~q~~ak~lie~k~k~n~~Fa~fl~~~~~sp~~rkl~L~~FL 474 (1029)
T KOG4305|consen 412 -----------------EGIGDILLAWLPKAEPYISYGANQAYAKALIEQKKKQNPRFARFLKECESSPESRKLDLVSFL 474 (1029)
T ss_pred -----------------chHHHHHHHHhhhhhHHHHHHhhhHHHHHHHHHHhccCchHHHHHHHHHhChhhhccchhhhh
Confidence 48999999999999999999999999999999 667899999999999999999999999999
Q ss_pred hhhhhhccchhhhhccc
Q psy10819 156 TFPMHQNAKKNFKKESY 172 (173)
Q Consensus 156 ~~PvQRi~rY~LLLe~~ 172 (173)
.+|+||+.||||||+.+
T Consensus 475 ~kp~sRl~RYpLllr~I 491 (1029)
T KOG4305|consen 475 TKPTSRLQRYPLLLREI 491 (1029)
T ss_pred ccccchhheeeHHHHHH
Confidence 99999999999999875
No 7
>KOG3520|consensus
Probab=99.93 E-value=1.4e-25 Score=194.83 Aligned_cols=145 Identities=19% Similarity=0.345 Sum_probs=133.5
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|+.||+.+|+.|++|..+|+.|+.... .++.+.+..||.|+++|+++|..|++.|+++...|...+
T Consensus 398 L~~TE~~HVRTLKIl~~vF~q~m~~e~-----~~~~~~l~~LFP~LdeL~eiH~~f~~~lk~rr~e~~~vI--------- 463 (1167)
T KOG3520|consen 398 LFQTERHHVRTLKILDRVFYQPMMEEL-----LFPQEELNKLFPCLDELIEIHSSFLQRLKERRKESLVVI--------- 463 (1167)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhccchH---------
Confidence 578999999999999999999998775 889999999999999999999999999999999888732
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCc-----hh-hhHHHHHhcHHHHHHHHHHHh-cChhHHHHHHHHhcCccccCCChhH
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLP-----ML-GIYQEYVRNHHYSLQVLTECK-QQPEFVQLLKRLEMKPACQGRSLEM 153 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~-----~~-~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~~l~~~~~~~~~~~l~l~~ 153 (173)
..|||++..+.+ .+ ++|..||.+|..|++.++.+. +++.|+.|++.++++|.|+++.|.+
T Consensus 464 -------------~~IGDlLl~~FsGe~ae~L~~~~a~FCs~q~~ALe~~K~k~~KD~rFq~fvkkaeS~p~cRRL~lkd 530 (1167)
T KOG3520|consen 464 -------------KRIGDLLLDQFSGENAERLKKTYAQFCSRQSIALEQLKTKQAKDKRFQAFVKKAESNPVCRRLGLKD 530 (1167)
T ss_pred -------------HHHHHHHHHHcCchHHHHHHHHHHHHhhccHHHHHHHHHHHhccHHHHHHHHHhhcchHHHhhcchH
Confidence 479999987653 45 589999999999999999665 7999999999999999999999999
Q ss_pred hhhhhhhhccchhhhhccc
Q psy10819 154 FLTFPMHQNAKKNFKKESY 172 (173)
Q Consensus 154 ~L~~PvQRi~rY~LLLe~~ 172 (173)
.++.-+|||||||||||++
T Consensus 531 ~I~~v~QRLTKYPLLle~I 549 (1167)
T KOG3520|consen 531 CILLVTQRLTKYPLLLERI 549 (1167)
T ss_pred HHHHHHHHHhhchHHHHHH
Confidence 9999999999999999986
No 8
>KOG3518|consensus
Probab=99.92 E-value=3.1e-25 Score=171.05 Aligned_cols=143 Identities=17% Similarity=0.293 Sum_probs=124.0
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|++||++||++|+.+++.|++-++... .+..++-+.+..+||++++|+.||.+++++|.++-..
T Consensus 129 ildtertyvedl~aiie~yld~i~edq--eklkl~ldaisalfg~ie~ifafnkel~n~ldaadld-------------- 192 (521)
T KOG3518|consen 129 ILDTERTYVEDLKAIIEDYLDCIREDQ--EKLKLGLDAISALFGCIEDIFAFNKELLNDLDAADLD-------------- 192 (521)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhhH--hhccCcHHHHHHHhhhHHHHHHHHHHHHHHHhhcccc--------------
Confidence 478999999999999999999887544 2345788999999999999999999999999976311
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFPMH 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~PvQ 160 (173)
| -.|+.||......|..|.+||.||++.+..+.+|.+|+-.+.++++.+..- .+.++|.+||++|||
T Consensus 193 ---~---------v~ia~cfve~s~efe~yieyctny~rmmatl~~~~q~~ilaka~qerq~al-~hsl~l~ayllkpvq 259 (521)
T KOG3518|consen 193 ---C---------VAIAECFVEKSEEFEDYIEYCTNYHRMMATLTECMQNKILAKAFQERQEAL-KHSLPLGAYLLKPVQ 259 (521)
T ss_pred ---h---------HHHHHHHHhcchhHHHHHHHHhhhHHHHHHHHHHHHhHHHHHHHHHHHHHH-hcccchhHHHHHHHH
Confidence 1 259999999999999999999999999999999999999998887754333 357999999999999
Q ss_pred hccchhhhhccc
Q psy10819 161 QNAKKNFKKESY 172 (173)
Q Consensus 161 Ri~rY~LLLe~~ 172 (173)
||.+|.|+|+.+
T Consensus 260 rilkyhlfle~i 271 (521)
T KOG3518|consen 260 RILKYHLFLEEI 271 (521)
T ss_pred HHHHHHHHHHHH
Confidence 999999999864
No 9
>KOG3521|consensus
Probab=99.88 E-value=1.9e-22 Score=166.32 Aligned_cols=153 Identities=16% Similarity=0.173 Sum_probs=126.5
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHH-HHHHHhcCCCcccccCCCCc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKG-LTSRMESWPTLVLVDFSIPY 79 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~-L~~~~~~~~~~~~~~~~~~~ 79 (173)
|++||..|++.|+.+.+.|..-|.+.. ....+-+-+-..+|+|+..|++.|..|+.. |...++....+. .|
T Consensus 185 LvtTE~~YIrkL~~~tdlllacL~nlQ--e~GlL~dVeaerlFsNv~~l~~~n~slW~~~l~P~laksr~Tg-----ep- 256 (846)
T KOG3521|consen 185 LVTTEFRYIRKLLRYTDLLLACLLNLQ--ECGLLKDVEAERLFSNVPTLFNVNRSLWLQVLEPILAKSRETG-----EP- 256 (846)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hcchhhhhHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhC-----CC-
Confidence 589999999999999998887777665 345787888899999999999999997655 444443321111 11
Q ss_pred chhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHH-hcChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 80 SYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTEC-KQQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~-~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
.+ ...+-+-|..+..+|+.|..||..+..+++.++++ +.|+.|+.|+.|||+++.|+++.|.|.|++|
T Consensus 257 --Ld---------~~~lq~GFl~f~s~f~pY~~ycle~s~cm~y~rel~~~n~lFrafvtW~Ekqk~c~RqkL~D~l~kP 325 (846)
T KOG3521|consen 257 --LD---------PNYLQNGFLDFGSWFRPYTNYCLEHSDCMKYIRELLKENELFRAFVTWAEKQKNCDRQKLIDTLSKP 325 (846)
T ss_pred --CC---------hHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhccchHHHHHHHHHHhhhhhhhHHHHHHhhhH
Confidence 11 13567789999999999999999999999999965 5799999999999999999999999999999
Q ss_pred hhhccchhhhhccc
Q psy10819 159 MHQNAKKNFKKESY 172 (173)
Q Consensus 159 vQRi~rY~LLLe~~ 172 (173)
+||++||+|||...
T Consensus 326 mQRLTKY~LLLkAV 339 (846)
T KOG3521|consen 326 MQRLTKYPLLLKAV 339 (846)
T ss_pred HHHhhhhHHHHHHH
Confidence 99999999999754
No 10
>KOG2996|consensus
Probab=99.88 E-value=3.1e-22 Score=163.30 Aligned_cols=139 Identities=22% Similarity=0.287 Sum_probs=127.4
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcch
Q psy10819 2 VEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYSY 81 (173)
Q Consensus 2 l~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~~ 81 (173)
-+||+.|++.|..+.+.|+.||+. +++..+.+.||.|+++|..+|..||++++..+..-..
T Consensus 206 ~~TE~kY~~tL~sI~k~f~~PLk~-------~l~~ad~~ivFiNieel~klHt~ll~ei~~sv~v~~~------------ 266 (865)
T KOG2996|consen 206 QQTEEKYTQTLESIEKTFMEPLKR-------FLPPADYNIVFINIEELNKLHTALLAEIEYSVKVAGG------------ 266 (865)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-------cCChhhhheeEecHHHHHHHHHHHHHHhHHHhhCCCc------------
Confidence 479999999999999999999884 5678999999999999999999999999998765443
Q ss_pred hhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHH-hcChhHHHHHHHHhcCccccCCChhHhhhhhhh
Q psy10819 82 EQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTEC-KQQPEFVQLLKRLEMKPACQGRSLEMFLTFPMH 160 (173)
Q Consensus 82 ~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~-~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~PvQ 160 (173)
+.++.+|.++.+.|-+|..||++-+.|.+.+..+ +.+..++.-+++|..+.+.++.+|.++|+.|||
T Consensus 267 ------------qtl~qVFikyker~liYG~YCS~~e~a~k~ln~llktrEdv~~kleEct~r~nngkF~l~DLL~VPmQ 334 (865)
T KOG2996|consen 267 ------------QTLYQVFIKYKERLLIYGKYCSNVESARKLLNELLKTREDVSRKLEECTARANNGKFTLRDLLVVPMQ 334 (865)
T ss_pred ------------ccHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHHhHHHHHHHHHHHhhhcCCceeeceeeeeeHH
Confidence 2699999999999999999999999999999976 579999999999999988779999999999999
Q ss_pred hccchhhhhcc
Q psy10819 161 QNAKKNFKKES 171 (173)
Q Consensus 161 Ri~rY~LLLe~ 171 (173)
|+.+|+|||+.
T Consensus 335 RvlKYhLLLkE 345 (865)
T KOG2996|consen 335 RVLKYHLLLKE 345 (865)
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 11
>KOG3519|consensus
Probab=99.83 E-value=1.4e-20 Score=163.23 Aligned_cols=146 Identities=23% Similarity=0.383 Sum_probs=128.7
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcC--CCcccccCCCC
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESW--PTLVLVDFSIP 78 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~--~~~~~~~~~~~ 78 (173)
+++||+.|+++|..++..|..++.... ..++.+.++.+|+|+++++.+|..|++.|+...... ..
T Consensus 344 ~l~tE~~Yv~~L~~~~~~yl~~~~k~~----~~~~~~~~~~~f~ni~~i~~f~~~fl~~L~~~~~~~~~~~--------- 410 (756)
T KOG3519|consen 344 LLDTEKNYVKDLNALCEGYLPPQNKRA----RGLSVNQLDLLFGNIEDILRFQKEFLKTLEQQINPELIPP--------- 410 (756)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhh----ccccHHHHHHHccCHHHHHHHHHHHHHHHHHhcchhhcch---------
Confidence 478999999999999999999964443 267889999999999999999999999999987543 11
Q ss_pred cchhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 79 YSYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
.. ..+|.+|+.+.+.|..|.+||++|+.+...+.+.+++++++.|+..|.........+|.++|++|
T Consensus 411 ---~~----------~~ig~~fL~~~~~f~~ys~yc~~h~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~L~s~l~~p 477 (756)
T KOG3519|consen 411 ---SL----------SEIGPVFLEQLDVFKIYSEYCNNHPKAQKKLSKLKKKKKVKEFLEACNLLQQHSNSSLSSFLLKP 477 (756)
T ss_pred ---hH----------hHHHHHHHHhcccceeechhhhccchHHHHHHHHhhhhhhhhhhhhhhhhhccccCCchhhhccH
Confidence 11 26999999999999999999999999999999999999999999999777766569999999999
Q ss_pred hhhccchhhhhccc
Q psy10819 159 MHQNAKKNFKKESY 172 (173)
Q Consensus 159 vQRi~rY~LLLe~~ 172 (173)
+||+++|||+|...
T Consensus 478 vqri~kYPLll~el 491 (756)
T KOG3519|consen 478 VQRICKYPLLLNEL 491 (756)
T ss_pred HHHhccCchhhhhh
Confidence 99999999998753
No 12
>KOG4240|consensus
Probab=99.74 E-value=4.1e-18 Score=147.60 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=113.2
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHH-HHHHHHHHHhcCCCcccccCCCCc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQI-FLKGLTSRMESWPTLVLVDFSIPY 79 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~-fl~~L~~~~~~~~~~~~~~~~~~~ 79 (173)
|++||+.||++|....+.|..-.........|++-. -...||+|+++|+.+|.. ||.+|++.-..|.
T Consensus 640 llqterayv~~L~~~l~~y~~e~d~~~~~i~~~~Ln-k~~~ifgnmeeiy~fhn~~~L~eLe~y~~~pE----------- 707 (1025)
T KOG4240|consen 640 LLQTERAYVRDLEECLEGYLAEMDSPMKEILPPLLN-KKEIIFGNMEEIYEFHNDIFLSELEKYEQLPE----------- 707 (1025)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchhhhccccccc-hHHHHHhhHHHHHHHHhhHHHHHhhhhccCHH-----------
Confidence 579999999999999999988766552223333333 889999999999999999 8999998765444
Q ss_pred chhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhhh
Q psy10819 80 SYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFPM 159 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~Pv 159 (173)
.+|++|..+++.|.+|..||.|.+.+...+.....-+-|.+.-+. ... .+++.+||++||
T Consensus 708 ---------------~Vg~~fle~~d~fqly~~Yc~nke~S~ql~~~~a~~~ff~e~qr~----~~l-~l~~~S~l~kpv 767 (1025)
T KOG4240|consen 708 ---------------DVGHCFLERADDFQLYAKYCQNKELSNQLIRLHAGCSFFQEIQRR----HGL-ELSISSYLIKPV 767 (1025)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHhCCcchHHHHHhcccccccHHHHHH----hhh-hhhhHHHHhHHH
Confidence 499999999999999999999999999999987666666554333 222 349999999999
Q ss_pred hhccchhhhhcc
Q psy10819 160 HQNAKKNFKKES 171 (173)
Q Consensus 160 QRi~rY~LLLe~ 171 (173)
|||++|.|||+.
T Consensus 768 qritkYqlllke 779 (1025)
T KOG4240|consen 768 QRITKYQLLLKE 779 (1025)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 13
>KOG2070|consensus
Probab=99.72 E-value=2e-17 Score=133.12 Aligned_cols=140 Identities=22% Similarity=0.293 Sum_probs=117.5
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
+++||+.|++.|..+...|..|++... +++..++..+.+|+++|+.+|+.++..|+++.+.-...
T Consensus 109 ~lesEkey~~eLq~lL~t~L~Plq~s~-----iLs~~ey~~LmgNfeeI~t~~qdL~~qlEec~~~~~~q---------- 173 (661)
T KOG2070|consen 109 ILESEKEYSKELQTLLSTYLRPLQTSE-----ILSSAEYSYLMGNFEEICTFQQDLVQQLEECTKLPEAQ---------- 173 (661)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcc-----ccchHHHHHHhcchHHhHhHHHHHHHHHHHhhcCchhh----------
Confidence 479999999999999999999998765 89999999999999999999999999999986443332
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhh-hHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLG-IYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFPM 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~-~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~Pv 159 (173)
.++|.+|+..++.++ +|..||.||+.|...|.+ ...+..+|++...+.. .+-+-|---|-+|.
T Consensus 174 -------------~RVGg~fln~ap~mkt~~~aYcanHP~AV~VL~k--~~dELek~me~Qgass-pg~lvLttgLSkPf 237 (661)
T KOG2070|consen 174 -------------QRVGGCFLNLAPQMKTLYLAYCANHPSAVNVLTK--HSDELEKFMETQGASS-PGILVLTTGLSKPF 237 (661)
T ss_pred -------------hhhhhHHHhhhHHHHHHHHHHHhcCchhhhHHHH--hHHHHHHHHHhcCCCC-CCeEEEecccchHH
Confidence 379999999999997 899999999999999986 4566777777643221 23455666788999
Q ss_pred hhccchhhhhcc
Q psy10819 160 HQNAKKNFKKES 171 (173)
Q Consensus 160 QRi~rY~LLLe~ 171 (173)
.|+-||+-||+.
T Consensus 238 rrldkY~~lLQE 249 (661)
T KOG2070|consen 238 RRLDKYPTLLQE 249 (661)
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
No 14
>KOG3522|consensus
Probab=99.70 E-value=5.7e-17 Score=137.31 Aligned_cols=125 Identities=26% Similarity=0.459 Sum_probs=112.0
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|+++|++|++.|..+++.|.+||.+.. ..+...+++.||.|+++|+++|..|+..+..+...|..++
T Consensus 8 l~~~Eq~yv~sL~t~vd~y~qpL~~~~----~l~~~~~~~eif~~i~ell~~he~fl~~l~s~~~~w~~qq--------- 74 (925)
T KOG3522|consen 8 LIDREQSYVESLHTGVDRYVQPLKERK----VLIDPRDVDEIFQNIPELLEIHEDFLEQLCSRDQQWDEQQ--------- 74 (925)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccc----cccCCchHHHHHHhhHHHHHHHHHHHHHHHhhhhhhHHHH---------
Confidence 578999999999999999999999832 3567789999999999999999999999999999998854
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCc---hhhhHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLP---MLGIYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTF 157 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~---~~~~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~ 157 (173)
++|+.|....+ -..+|..||+|+..|...++..+ .|.|.+|++ ++++
T Consensus 75 --------------~vga~~v~~fSk~~v~~~Y~~y~nn~~~A~~~l~~~~-rpaf~~Fl~---------------l~~k 124 (925)
T KOG3522|consen 75 --------------KVGASFVYSFSKTAVLAAYSKYVNNFKRAKCALRNKK-RPAFSKFLE---------------LMIK 124 (925)
T ss_pred --------------HHHHHHHHhhhHHHHHHHHHHHHhchhHHHHHHHHhc-chHHHHHHH---------------HHhc
Confidence 79999987654 45689999999999999999655 999999998 8999
Q ss_pred hhhhccchhhhhc
Q psy10819 158 PMHQNAKKNFKKE 170 (173)
Q Consensus 158 PvQRi~rY~LLLe 170 (173)
| |+|||.||++
T Consensus 125 P--r~P~y~lll~ 135 (925)
T KOG3522|consen 125 P--RFPRYELLLQ 135 (925)
T ss_pred c--CCchHHHHHH
Confidence 9 9999999986
No 15
>COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
Probab=99.67 E-value=6.1e-17 Score=137.45 Aligned_cols=147 Identities=18% Similarity=0.307 Sum_probs=127.1
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcch
Q psy10819 2 VEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYSY 81 (173)
Q Consensus 2 l~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~~ 81 (173)
+-||++||++|..+.+.|++||....-. ..-...+.++.+|.|+-+|+.++..|+++|..+..-.+..
T Consensus 493 i~ter~FVk~le~lRD~~~K~L~~sn~I-p~n~r~~Fik~vf~~i~~i~avn~k~~~AL~~rQ~lsPiv----------- 560 (1175)
T COG5422 493 IYTERDFVKDLEYLRDTWIKPLEESNII-PENARRNFIKHVFANINEIYAVNSKLLKALTNRQCLSPIV----------- 560 (1175)
T ss_pred eeeccchhhhhHHHHHHHHHHHHHcCcC-chhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcccccccc-----------
Confidence 5699999999999999999998865421 0113456789999999999999999999999986543332
Q ss_pred hhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHhc-ChhHHHHHHHHhcCccccCCChhHhhhhhhh
Q psy10819 82 EQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECKQ-QPEFVQLLKRLEMKPACQGRSLEMFLTFPMH 160 (173)
Q Consensus 82 ~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~~-~~~f~~~l~~~~~~~~~~~l~l~~~L~~PvQ 160 (173)
..|||||++++|.|..+..|+++.+.|...++.-++ ||.|..|..+++.-....++.+..||-+|+-
T Consensus 561 ------------~~I~DifL~~vP~Fepfiky~a~~~yaky~~erekS~np~fa~Fd~~v~rl~~s~k~~ld~yLtk~~t 628 (1175)
T COG5422 561 ------------NGIADIFLDYVPKFEPFIKYGASQPYAKYEFEREKSVNPNFARFDHEVERLDESRKLELDGYLTKPTT 628 (1175)
T ss_pred ------------cchHHHHHhhhhhhhHHHHhhcccchhheeeeeccccCcchhhhhHHHHhcchhhhhcccceecCCcc
Confidence 379999999999999999999999999999996665 9999999999997777788999999999999
Q ss_pred hccchhhhhccc
Q psy10819 161 QNAKKNFKKESY 172 (173)
Q Consensus 161 Ri~rY~LLLe~~ 172 (173)
|++||+||+|..
T Consensus 629 r~~Ry~lL~e~v 640 (1175)
T COG5422 629 RLARYPLLLEEV 640 (1175)
T ss_pred cchhhHHHHhhh
Confidence 999999999864
No 16
>KOG0689|consensus
Probab=99.60 E-value=3.8e-17 Score=132.65 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=106.1
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHH-HHHHHHHHHhcCCCcccccCCCCc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQI-FLKGLTSRMESWPTLVLVDFSIPY 79 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~-fl~~L~~~~~~~~~~~~~~~~~~~ 79 (173)
|+.||..||++|...+..|...+.... -|.--...-+.||+|+.+|+.+|.. |+.+++......
T Consensus 70 ~iaTE~~yv~~l~~~~~~y~~~~~~~~---lp~~lrg~~~iifgni~~i~~~h~~~fl~e~e~~~r~~------------ 134 (448)
T KOG0689|consen 70 LIATEVDYVKDLKSVVENYIELLDAED---LPEDLRGKDKIIFGNIKEIYEFHKKEFLPELERCERDP------------ 134 (448)
T ss_pred HHHHHHhhhhccccccccccccccccC---CChhccCCceeeechHHHHHHhhcccCcchHHHhhhCH------------
Confidence 578999999999999999988766542 1221223378999999999999999 488888765331
Q ss_pred chhhhhhhhhhhccccHHHHHHHhCchhh-hHHHHHhcHHHHHHHHHHHhcChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 80 SYEQCVNAYLVSEIGLLGDLFDMLLPMLG-IYQEYVRNHHYSLQVLTECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~ig~if~~~~~~~~-~Y~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
...|.+|.++...+. .|..||.|.+.......+ -.+..|.+.+..+.. .++++.++|++|
T Consensus 135 --------------~~~~~~f~kh~~k~~~~y~~y~q~kp~s~~~~~~----~~~~~~f~~~~~~~~-~~l~l~~~l~kP 195 (448)
T KOG0689|consen 135 --------------LELGQAFAKHERKNSVLYVTYCQNKPKSDYLLAE----YDNEAFFQEYQTQLG-HKLDLSSYLIKP 195 (448)
T ss_pred --------------HHHHHHHHHHHHHhhhhhhhhhcCCCCCccccee----cccchhhHHHhhhcc-cccccchhhhhh
Confidence 259999999999998 999999999988333222 223455556554443 479999999999
Q ss_pred hhhccchhhhhccc
Q psy10819 159 MHQNAKKNFKKESY 172 (173)
Q Consensus 159 vQRi~rY~LLLe~~ 172 (173)
|||+++|+|||++.
T Consensus 196 iQR~~kYqlLL~~~ 209 (448)
T KOG0689|consen 196 VQRIMKYQLLLQDF 209 (448)
T ss_pred hHHHHHHHHHHHHH
Confidence 99999999999864
No 17
>KOG3524|consensus
Probab=99.49 E-value=5.3e-14 Score=117.51 Aligned_cols=139 Identities=17% Similarity=0.304 Sum_probs=125.3
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcch
Q psy10819 2 VEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYSY 81 (173)
Q Consensus 2 l~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~~ 81 (173)
..||..|+.-+..+.+.|..+|......+.|++...++.++|+|.+.|...|+...+.+..-...|....
T Consensus 393 y~tesnyv~il~Ti~~lf~~kleei~e~~~pil~~~eiktifgn~l~I~~vh~k~~D~l~~l~~nw~e~k---------- 462 (850)
T KOG3524|consen 393 YCTESNYVFILRTIVALFFGKLEEILELHEPILARLEIKTIFGNTLLIVVVHKKNDDKLLDLAQNWIEAK---------- 462 (850)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHhCCcccCchhhcccccCchhhhhhhccchHHHHHHHHhhHHHH----------
Confidence 5799999999999999999999888888889999999999999999999999999999999888887721
Q ss_pred hhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHHh-cChhHHHHHHHHhcCccccCCChhHhhhhhhh
Q psy10819 82 EQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTECK-QQPEFVQLLKRLEMKPACQGRSLEMFLTFPMH 160 (173)
Q Consensus 82 ~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~~-~~~~f~~~l~~~~~~~~~~~l~l~~~L~~PvQ 160 (173)
....+.|..|+.-++.....+.+|. ++|.|..|++.-++.|+|+++.+.++++.|||
T Consensus 463 ----------------------~el~kayppyvnffet~ke~~~~cdre~prfhaflKinq~kpecgRq~l~dlmirpvq 520 (850)
T KOG3524|consen 463 ----------------------EELKKAYPPYVNFFETIKELFDKCDRENPRFHAFLKINQSKPECGRQKLTDLMIRPVQ 520 (850)
T ss_pred ----------------------HHHHHhccchhhHHHHhHHHHHHHhccchHHHHHHHccccchhhhhhcccchhccchh
Confidence 1223678889999999999999995 79999999999999999999999999999999
Q ss_pred hccchhhhhccc
Q psy10819 161 QNAKKNFKKESY 172 (173)
Q Consensus 161 Ri~rY~LLLe~~ 172 (173)
|++.-.|||.+.
T Consensus 521 rlpsvilllndl 532 (850)
T KOG3524|consen 521 RLPSVILLLNDM 532 (850)
T ss_pred hhhHHHHHHHHH
Confidence 999999998753
No 18
>KOG3531|consensus
Probab=99.47 E-value=9.1e-15 Score=123.90 Aligned_cols=151 Identities=22% Similarity=0.327 Sum_probs=129.4
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYS 80 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~ 80 (173)
|..||++|.++|.++..+|...+.... .+.......+|.|++.+.++|+.||+++++++..|+...
T Consensus 541 l~~tERty~kdleV~tt~Frst~v~~d-----am~~~~~s~l~~~~~pl~k~h~~fLk~ieeria~weGrs--------- 606 (1036)
T KOG3531|consen 541 LSDTERTYLKDLEVITTWFRSTVVKED-----AMPNALKSLLFHNSTPLTKFHEGFLKEIEERIALWEGRS--------- 606 (1036)
T ss_pred cccccccchhccceeeeeecceeecCc-----ccccchhhhhccCCChhhHHHHHHHHHHHHHHHhccCCC---------
Confidence 468999999999999988866544332 566778899999999999999999999999999998853
Q ss_pred hhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHHHH-hcChhHHHHHHHHhcCccccCCChhHhhhhhh
Q psy10819 81 YEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLTEC-KQQPEFVQLLKRLEMKPACQGRSLEMFLTFPM 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~~~-~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~Pv 159 (173)
|+... .-.+|||+-++.+..++.|.+|...|..+...++.. +...+|+.+.+..+.+..| .+++..||.+|+
T Consensus 607 -----nani~-~~~~igDVmLk~m~~l~i~~~~~q~h~~~l~~~t~~~k~~~r~~~v~kefelqkvc-yLP~~~fllkpL 679 (1036)
T KOG3531|consen 607 -----NANIV-IEQRIGDVMLKNMRSLKITTTTTQRHAETLTTLTTTSKVLTRLEAVYKEFELQKVC-YLPLNTFLLKPL 679 (1036)
T ss_pred -----CCcee-eeeccCCcchhhhhccchhhhhHHhHHHHHHHHhhcchhhhhHHhhhccHHhhhcc-ccccchhhhccc
Confidence 11111 113699999999999999999999999999999954 5699999999999999988 799999999999
Q ss_pred hhccchhhhhccc
Q psy10819 160 HQNAKKNFKKESY 172 (173)
Q Consensus 160 QRi~rY~LLLe~~ 172 (173)
+|+..|.+.||++
T Consensus 680 ~rllhyq~~LeRL 692 (1036)
T KOG3531|consen 680 SRLLHYQLALERL 692 (1036)
T ss_pred cHHHHHHHHHHHh
Confidence 9999999999986
No 19
>KOG4269|consensus
Probab=97.86 E-value=2.1e-06 Score=74.58 Aligned_cols=143 Identities=21% Similarity=0.442 Sum_probs=118.4
Q ss_pred chHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCcch
Q psy10819 2 VEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMESWPTLVLVDFSIPYSY 81 (173)
Q Consensus 2 l~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~~~~~~~~~~~~~~~~ 81 (173)
..+|..|.+.+..+.- =+.|+.....++.|+++...+.+||..+.+|+.+|..|...|....+.|..+.
T Consensus 341 ~~~d~~~~~s~d~l~l-~~~p~~al~~tsqp~~~~~~~~t~~~k~s~i~~~hk~~~~~l~pk~q~~~sqs---------- 409 (1112)
T KOG4269|consen 341 LASDEHYSQSLDALLL-PMKPLKALATTSQPVLTKQQIETIFNKFSPIYEIHKEFYDNLHPKVQQWKSQS---------- 409 (1112)
T ss_pred ccccchhhcccchhhc-ccccccccCCCCCCCccccccccccccCCCchhhhhhhccccCchhhhhhhhh----------
Confidence 3456778888877765 44777777777889999999999999999999999999999999999999864
Q ss_pred hhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhc--HHHHHHHHHHHhc-ChhHHHHHHHHhcCc------cccCCChh
Q psy10819 82 EQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRN--HHYSLQVLTECKQ-QPEFVQLLKRLEMKP------ACQGRSLE 152 (173)
Q Consensus 82 ~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~--~~~a~~~l~~~~~-~~~f~~~l~~~~~~~------~~~~l~l~ 152 (173)
..|..|......+..|..|+.| |..|+..-+.|.+ ++.|+..-++..... .....+..
T Consensus 410 -------------~~~~~~~~L~S~l~n~~af~~~~sy~~al~~~~~~~sss~qfq~i~~~~~~~~n~~s~~sst~~~~~ 476 (1112)
T KOG4269|consen 410 -------------NSGGLFQKLASQLGNYLAFVDNESYLVALEMAEKCASSSPQFQCISEQLVVGVNKDSKDSSTWKDEE 476 (1112)
T ss_pred -------------ccCccchhhhhhcchhhhhhcchhhhhhcccccchhhcchhhhhhhhhheecccccccccCCccchh
Confidence 6888899999999999999999 9999999898864 999987766654332 12456788
Q ss_pred Hhhhhhhhhccchhhh
Q psy10819 153 MFLTFPMHQNAKKNFK 168 (173)
Q Consensus 153 ~~L~~PvQRi~rY~LL 168 (173)
..|.+|+.|.++..+-
T Consensus 477 ~~l~rpi~~~~ss~~s 492 (1112)
T KOG4269|consen 477 WLLYRPIDRVTSSTLS 492 (1112)
T ss_pred hhhccchhhhhHHHHH
Confidence 9999999999987663
No 20
>KOG3524|consensus
Probab=97.27 E-value=0.00078 Score=57.77 Aligned_cols=131 Identities=6% Similarity=-0.072 Sum_probs=103.9
Q ss_pred CchHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHHhc-CCCcccccCCCCc
Q psy10819 1 MVEAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRMES-WPTLVLVDFSIPY 79 (173)
Q Consensus 1 Ll~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~~~-~~~~~~~~~~~~~ 79 (173)
|+.|+.+|+...-..+..+..||.+....+.+..+..++..+|+.++++..-|...+.+.++.+.. +++
T Consensus 402 il~Ti~~lf~~kleei~e~~~pil~~~eiktifgn~l~I~~vh~k~~D~l~~l~~nw~e~k~el~kaypp---------- 471 (850)
T KOG3524|consen 402 ILRTIVALFFGKLEEILELHEPILARLEIKTIFGNTLLIVVVHKKNDDKLLDLAQNWIEAKEELKKAYPP---------- 471 (850)
T ss_pred HHHHHHHHHhhhHHHHHHhCCcccCchhhcccccCchhhhhhhccchHHHHHHHHhhHHHHHHHHHhccc----------
Confidence 468999999998888888999998887767777888999999999999888888888887765533 232
Q ss_pred chhhhhhhhhhhccccHHHHHHHhCchhhhHHHHHhcHHHHHHHHH-HHhcChhHHHHHHHHhcCccccCCChhHhhhhh
Q psy10819 80 SYEQCVNAYLVSEIGLLGDLFDMLLPMLGIYQEYVRNHHYSLQVLT-ECKQQPEFVQLLKRLEMKPACQGRSLEMFLTFP 158 (173)
Q Consensus 80 ~~~~~~~~~~~~~~~~ig~if~~~~~~~~~Y~~Y~~~~~~a~~~l~-~~~~~~~f~~~l~~~~~~~~~~~l~l~~~L~~P 158 (173)
++.+|+.|.+++...+.....+. -++.|+.+-+|.+.-...+.++....--.++.|
T Consensus 472 -----------------------yvnffet~ke~~~~cdre~prfhaflKinq~kpecgRq~l~dlmirpvqrlpsvill 528 (850)
T KOG3524|consen 472 -----------------------YVNFFETIKELFDKCDRENPRFHAFLKINQSKPECGRQKLTDLMIRPVQRLPSVILL 528 (850)
T ss_pred -----------------------hhhHHHHhHHHHHHHhccchHHHHHHHccccchhhhhhcccchhccchhhhhHHHHH
Confidence 23345666666666666666666 446788888998888888999888888899999
Q ss_pred hhhccc
Q psy10819 159 MHQNAK 164 (173)
Q Consensus 159 vQRi~r 164 (173)
+||+++
T Consensus 529 lndl~k 534 (850)
T KOG3524|consen 529 LNDMAK 534 (850)
T ss_pred HHHHHh
Confidence 999998
No 21
>PF12210 Hrs_helical: Hepatocyte growth factor-regulated tyrosine kinase substrate; InterPro: IPR024641 This domain comprises the helical region of hepatocyte growth factor-regulated tyrosine kinase substrate (HRS). It is approximately 100 amino acids in length. Hrs, together with signal transducing adaptor molecule (STAM), forms the ESCRT-0 complex, which sorts ubiquitinated cell surface receptors to lysosomes for degradation []. ; PDB: 3F1I_H.
Probab=91.85 E-value=0.67 Score=30.11 Aligned_cols=54 Identities=22% Similarity=0.362 Sum_probs=42.3
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHH
Q psy10819 7 EYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSR 63 (173)
Q Consensus 7 ~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~ 63 (173)
.+++.|+.-+++|...++...+.+.++.++..+.++|-++-.+ |..+++-+.+.
T Consensus 2 ef~~~l~~~v~if~nRmksns~RGrsIanDsaVqsLF~~lt~m---H~~LL~~i~~~ 55 (96)
T PF12210_consen 2 EFCNTLRSSVEIFVNRMKSNSSRGRSIANDSAVQSLFQTLTAM---HPQLLKYIQEQ 55 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--GGG-HHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHhcCCCCcccHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 6899999999999999999888899999999999999776654 67766666553
No 22
>PF00611 FCH: Fes/CIP4, and EFC/F-BAR homology domain; InterPro: IPR001060 The FCH domain is a short conserved region of around 60 amino acids first described as a region of homology between FER and CIP4 proteins []. Many proteins containing an FCH domain are involved in the regulation of cytoskeletal rearrangements, vesicular transport and endocytosis. In the CIP4 protein the FCH domain binds to microtubules []. The FCH domain is always found N-terminally and is followed by a coiled-coil region. Proteins containing an FCH domain can be divided in 3 classes []: A subfamily of protein kinases usually associated with an SH2 domain: Fps/fes (Fujimani poultry sarcoma/feline sarcoma) proto-oncogenes. They are non-receptor protein-tyrosine kinases preferentially expressed in myeloid lineage. The viral oncogene has an unregulated kinase activity which abrogates the need for cytokines and influences differentiation of haematopoietic progenitor cells. Fes related protein (fer). It is an ubiquitously expressed homologue of Fes. Adaptor proteins usually associated with a C-terminal SH3 domain: Schizosaccharomyces pombe CDC15 protein. It mediates cytoskeletal rearrangements required for cytokinesis. It is essential for viability. CD2 cytoplasmic domain binding protein. Mammalian Cdc42-interacting protein 4 (CIP4). It may act as a link between Cdc42 signaling and regulation of the actin cytoskeleton. Mammalian PACSIN proteins. A family of cytoplasmic phosphoproteins playing a role in vesicle formation and transport. A subfamily of Rho-GAP proteins: Mammalian RhoGAP4 proteins. They may down-regulate Rho-like GTPases in hematopoietic cells. Yeast hypothetical protein YBR260C. Caenorhabditis elegans hypothetical protein ZK669.1. ; PDB: 2EFK_A 2EFL_A 2X3W_A 2X3X_C 2X3V_C 3I2W_A 3ABH_B 3Q0K_B 3HAJ_A 3ACO_B ....
Probab=44.42 E-value=52 Score=20.32 Aligned_cols=54 Identities=20% Similarity=0.258 Sum_probs=32.1
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKG 59 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~ 59 (173)
..|..|.+.|..+...+......... ..-...-+..+-...+.+-..|..+-..
T Consensus 37 ~lE~~Yak~L~kl~~~~~~~~~~~~~---~~t~~~~~~~~~~~~~~~a~~h~~~a~~ 90 (91)
T PF00611_consen 37 SLEEEYAKSLQKLAKKFKKKMKSSQE---YGTLKNAWDSLLEETEQIAEQHSKLAEN 90 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSS----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56899999999999988765442210 0001233445555556666666665544
No 23
>cd07658 F-BAR_NOSTRIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Nitric Oxide Synthase TRaffic INducer (NOSTRIN). F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Nitric Oxide Synthase TRaffic INducer (NOSTRIN) is expressed in endothelial and epithelial cells and is involved in the regulation, trafficking and targeting of endothelial NOS (eNOS). NOSTRIN facilitates the endocytosis of eNOS by coordinating the functions of dynamin and the Wiskott-Aldrich syndrome protein (WASP). Increased expression of NOSTRIN may be correlated to preeclampsia. NOSTRIN contains an N-terminal F-BAR domain and a C-terminal SH3 domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules. The F-BAR domain of NOSTRIN is necessary and sufficient fo
Probab=36.41 E-value=1.2e+02 Score=23.15 Aligned_cols=55 Identities=16% Similarity=0.096 Sum_probs=40.0
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTS 62 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~ 62 (173)
.-|..|.+.|..|..-+..+... . +.-...-...|....+.+-..|..+-..|..
T Consensus 33 ~IE~~YAK~L~kLa~k~~k~~~~---~--~Gtl~~aw~~~~~e~e~~a~~H~~la~~L~~ 87 (239)
T cd07658 33 ELELNYAKGLSKLSGKLSKASKS---V--SGTLSSAWTCVAEEMESEADIHRNLGSALTE 87 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc---C--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999867444311 1 1223456677888999999999998887764
No 24
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=32.45 E-value=30 Score=21.71 Aligned_cols=29 Identities=10% Similarity=0.331 Sum_probs=23.9
Q ss_pred HHHHhcHHHHHHHHHHHhcChhHHHHHHH
Q psy10819 111 QEYVRNHHYSLQVLTECKQQPEFVQLLKR 139 (173)
Q Consensus 111 ~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~ 139 (173)
.+|+.+|..|...+++..++.-..++++.
T Consensus 48 PaYItsh~nAR~lIr~~eRDellEeLv~~ 76 (79)
T PF06135_consen 48 PAYITSHNNARNLIRKIERDELLEELVRF 76 (79)
T ss_pred CccccCcccHHHHHHHHhHHHHHHHHHHH
Confidence 46889999999999988777777777664
No 25
>cd07676 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Formin Binding Protein 17 (FBP17), also called FormiN Binding Protein 1 (FNBP1), is involved in dynamin-mediated endocytosis. It is recruited to clathrin-coated pits late in the endocytosis process and may play a role in the invagination and scission steps. FBP17 binds in vivo to tankyrase, a protein involved in telomere maintenance and mitogen activated protein kinase (MAPK) signaling. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.
Probab=30.82 E-value=1.5e+02 Score=22.98 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=41.3
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCH-HhHhhhccChHHHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSH-EDVNSIFLNSETVLFLHQIFLKGLTSRM 64 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~-~~~~~iF~n~~~i~~~h~~fl~~L~~~~ 64 (173)
.-|+.|-+.|..|..-|..-. ...+...|..+. .-...++..++.+-+.|..|-..|...+
T Consensus 33 ~IEkeYakkL~~L~kKy~~kk-~~~~~~~~~~t~~~aw~~~l~e~~~~A~~H~~~~~~L~~~v 94 (253)
T cd07676 33 EIELSYAKQLRNLSKKYQPKK-NSKEEEEYKYTSCRAFLMTLNEMNDYAGQHEVISENLASQI 94 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999885543 221112223333 4556667788889999999888886543
No 26
>cd07680 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1). F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSIN 1 or Syndapin I is expressed specifically in the brain and is localized in neurites and synaptic boutons. It binds the brain-specific proteins dynamin I, synaptojanin, synapsin I, and neural Wiskott-Aldrich syndrome protein (nWASP), and functions as a link between the cytoskeletal machinery and synaptic vesicle endocytosis. PACSIN 1 interacts with huntingtin and may be implicated in the neuropatholog
Probab=29.17 E-value=1.5e+02 Score=23.02 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=39.5
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTS 62 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~ 62 (173)
..|+.|.+.|..|..-+...+ ...+.+.-...-...|.+..+.|-..|..+-..|..
T Consensus 33 ~IE~~Yak~L~~Lakk~~~~~---~~~~~~Gtl~~aw~~i~~etE~ia~~H~~la~~L~~ 89 (258)
T cd07680 33 KIEKAYGQQLTDWAKRWRQLI---EKGPQYGSLERAWGAIMTEADKVSELHQEVKNNLLN 89 (258)
T ss_pred HHHHHHHHHHHHHHHHhhccc---ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999998665321 111111223455788889999999999998877744
No 27
>cd07655 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce
Probab=28.89 E-value=2.1e+02 Score=22.04 Aligned_cols=59 Identities=12% Similarity=0.130 Sum_probs=42.0
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRM 64 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~ 64 (173)
.-|+.|-+.|..|..-|..... ....+.-...-...+....+.+-..|..+-..|..-+
T Consensus 33 ~IE~~Yak~L~kLakk~~~~~~---~~~e~gsl~~aw~~~~~e~e~~a~~H~~l~~~L~~~v 91 (258)
T cd07655 33 EIEKAYAKKLKEWAKKWRDLIE---KGPEYGTLETAWKGLLSEAERLSELHLSIRDKLLNDV 91 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhhhc---cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999987754432 1111122345678888999999999999888886644
No 28
>PRK05473 hypothetical protein; Provisional
Probab=28.59 E-value=35 Score=21.76 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=24.5
Q ss_pred HHHHhcHHHHHHHHHHHhcChhHHHHHHHH
Q psy10819 111 QEYVRNHHYSLQVLTECKQQPEFVQLLKRL 140 (173)
Q Consensus 111 ~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~ 140 (173)
.+|+.+|..|...+++..++.-..++++.-
T Consensus 51 PaYItsh~nAR~lIrkiERDEilEeLv~~Y 80 (86)
T PRK05473 51 PAYIPRHNDARNLIRKLERDEILEELVKSY 80 (86)
T ss_pred CCccCCcccHHHHHHHHhHHHHHHHHHHHH
Confidence 468899999999999988887777777654
No 29
>PF10454 DUF2458: Protein of unknown function (DUF2458); InterPro: IPR018858 This entry represents a family of uncharacterised proteins.
Probab=28.18 E-value=1.1e+02 Score=21.70 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=23.2
Q ss_pred HHHhcHHHHHHHHHH-HhcChhHHHHHHHHhc
Q psy10819 112 EYVRNHHYSLQVLTE-CKQQPEFVQLLKRLEM 142 (173)
Q Consensus 112 ~Y~~~~~~a~~~l~~-~~~~~~f~~~l~~~~~ 142 (173)
.|+.+++.|+..+.+ ..+||.|..-++....
T Consensus 3 ~~It~w~~ALryv~~~v~~n~~~~~~Ir~Li~ 34 (150)
T PF10454_consen 3 STITTWPAALRYVMKTVAQNPEFLQRIRRLIK 34 (150)
T ss_pred hhhhcHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 477888888888874 4578888887777643
No 30
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=27.56 E-value=1.7e+02 Score=20.47 Aligned_cols=48 Identities=17% Similarity=0.393 Sum_probs=34.4
Q ss_pred HHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHH
Q psy10819 7 EYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRM 64 (173)
Q Consensus 7 ~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~ 64 (173)
=|++.|+.+.+.|... ..-...++.+..-+++++.-....++.++..-
T Consensus 19 PYlKQL~~il~~f~nd----------~CC~k~v~~~~~~l~~ll~~~~~~l~~I~~~n 66 (140)
T PF05290_consen 19 PYLKQLRIILKMFVND----------YCCKKTVKSLQMYLNELLSHSLKYLEKIKAIN 66 (140)
T ss_pred HHHHHHHHHHHHHhhh----------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3888998888877554 23345667777778888888877777776543
No 31
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=24.74 E-value=1.1e+02 Score=22.94 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=25.9
Q ss_pred HHHhcHHHHHHHHHH-HhcChhHHHHHHHHhcCc
Q psy10819 112 EYVRNHHYSLQVLTE-CKQQPEFVQLLKRLEMKP 144 (173)
Q Consensus 112 ~Y~~~~~~a~~~l~~-~~~~~~f~~~l~~~~~~~ 144 (173)
.--.+++++.+.+.+ .+-+|.|++|++++..+.
T Consensus 56 ~i~~s~~Eile~llk~i~Idp~fKef~e~ike~d 89 (220)
T COG4359 56 SIHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD 89 (220)
T ss_pred hcCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC
Confidence 334567888888875 566999999999997775
No 32
>cd07649 F-BAR_GAS7 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Growth Arrest Specific protein 7. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Growth Arrest Specific protein 7 (GAS7) is mainly expressed in the brain and is required for neurite outgrowth. It may also play a role in the protection and migration of embryonic stem cells. Treatment-related acute myeloid leukemia (AML) has been reported resulting from mixed-lineage leukemia (MLL)-GAS7 translocations as a complication of primary cancer treatment. GAS7 contains an N-terminal SH3 domain, followed by a WW domain, and a central F-BAR domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.
Probab=24.19 E-value=2.1e+02 Score=21.86 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=37.0
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSR 63 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~ 63 (173)
.-|+.|.+.|..|.. .+... ...+ --..-+..+.+..+.+-.+|..|-..|..-
T Consensus 33 ~IEe~Yak~L~klak---~~~~~---~e~G-tl~~sw~~~~~e~E~~a~~H~~la~~L~~e 86 (233)
T cd07649 33 KIEEEYAKNLSKLSQ---SSLAA---QEEG-TLGEAWAQVKKSLADEAEVHLKFSSKLQSE 86 (233)
T ss_pred HHHHHHHHHHHHHHh---hhcCC---CCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458899999988875 22111 1111 224567888899999999999988877654
No 33
>COG4472 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.56 E-value=51 Score=20.76 Aligned_cols=32 Identities=9% Similarity=0.106 Sum_probs=25.6
Q ss_pred HHHHhcHHHHHHHHHHHhcChhHHHHHHHHhc
Q psy10819 111 QEYVRNHHYSLQVLTECKQQPEFVQLLKRLEM 142 (173)
Q Consensus 111 ~~Y~~~~~~a~~~l~~~~~~~~f~~~l~~~~~ 142 (173)
..|+-+|..|...++++.++.-..++++.-.+
T Consensus 51 PaYIpr~ndARn~IRk~eRDeIvEElvk~YLk 82 (88)
T COG4472 51 PAYIPRYNDARNQIRKLERDEIVEELVKYYLK 82 (88)
T ss_pred ccccCccccHHHHHHHHhHHHHHHHHHHHHHh
Confidence 35788999999999999888878887776543
No 34
>cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins. F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Proteins in this group have been named FCH domain Only (FCHO) proteins. Vertebrates have two members, FCHO1 and FCHO2. These proteins contain an F-BAR domain and a C-terminal domain of unknown function named SAFF which is also present in endophilin interacting protein 1. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to negatively-charged lipid membranes. They can induce membrane deformation in the form of long tubules.
Probab=20.75 E-value=2.9e+02 Score=21.12 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=36.3
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCCCCHHhHhhhccChHHHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPPCSHEDVNSIFLNSETVLFLHQIFLKGLTSRM 64 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~l~~~~~~~iF~n~~~i~~~h~~fl~~L~~~~ 64 (173)
.-|..|.+.|..|...+... .. ..--..-...|..-.+.+...|..+...|....
T Consensus 33 ~IEe~Yak~L~kLakk~~~~------~~-~gt~~~~w~~i~~~~e~~a~~H~~l~~~L~~~~ 87 (261)
T cd07648 33 TIEETYSKALNKLAKQASNS------SQ-LGTFAPLWLVLRVSTEKLSELHLQLVQKLQELI 87 (261)
T ss_pred HHHHHHHHHHHHHHHHhcCC------CC-cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45888999998888754221 00 111233456777778899999999988886443
No 35
>cd07681 F-BAR_PACSIN3 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 3 (PACSIN3). F-BAR domains are dimerization modules that bind and bend membranes and are found in proteins involved in membrane dynamics and actin reorganization. Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSIN 3 or Syndapin III is expressed ubiquitously and regulates glucose uptake in adipocytes through its role in GLUT1 trafficking. It also modulates the subcellular localization and stimulus-specific function of the cation channel TRPV4. PACSIN 3 contains an N-terminal F-BAR domain and a C-terminal SH3 domain. F-BAR domains form banana-shaped dimers with a positively-charged concave surface that binds to
Probab=20.61 E-value=3.7e+02 Score=20.96 Aligned_cols=56 Identities=11% Similarity=0.103 Sum_probs=37.1
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHhhhcCCCCC-CCHHhHhhhccChHHHHHHHHHHHHHHHH
Q psy10819 3 EAEEEYMEQMQVLVSCFLRPFKMAASSKRPP-CSHEDVNSIFLNSETVLFLHQIFLKGLTS 62 (173)
Q Consensus 3 ~TE~~Yv~~L~~l~~~f~~pl~~~~~~~~~~-l~~~~~~~iF~n~~~i~~~h~~fl~~L~~ 62 (173)
..|+.|-+.|..+..-....+ ... ... -...-...+.+..+.|-.+|..+-..|..
T Consensus 33 ~IE~~YAk~L~~lakk~~~~~---e~g-~eyGTL~~sw~~~~~e~E~ia~~H~~l~~~L~~ 89 (258)
T cd07681 33 KIEKGYAQQLSDWARKWRGIV---EKG-PQYGTLEKAWHAFLTAAERLSEIHLELRENLVG 89 (258)
T ss_pred HHHHHHHHHHHHHHHhHHHhh---hcc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358889999988887442221 111 011 12345678889999999999998777754
Done!