Query psy10821
Match_columns 200
No_of_seqs 230 out of 1913
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 19:22:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10821.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10821hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253|consensus 99.7 2.2E-18 4.7E-23 144.2 1.8 149 20-170 375-527 (528)
2 TIGR01299 synapt_SV2 synaptic 99.5 6.4E-14 1.4E-18 128.7 7.7 129 42-170 609-741 (742)
3 TIGR00898 2A0119 cation transp 99.5 3E-13 6.4E-18 119.1 10.0 119 46-166 145-267 (505)
4 KOG0252|consensus 99.4 1.3E-13 2.9E-18 118.3 6.3 136 42-177 362-512 (538)
5 TIGR00887 2A0109 phosphate:H+ 99.4 1.4E-13 3.1E-18 121.5 6.1 132 44-175 351-501 (502)
6 TIGR00898 2A0119 cation transp 99.4 1.3E-12 2.8E-17 115.0 7.0 129 44-172 371-504 (505)
7 KOG0569|consensus 99.3 3.7E-12 8E-17 111.6 7.1 136 44-180 321-472 (485)
8 PF00083 Sugar_tr: Sugar (and 99.3 9.1E-14 2E-18 120.5 -4.1 134 43-176 301-450 (451)
9 PRK10642 proline/glycine betai 99.2 6.4E-11 1.4E-15 104.4 8.2 127 46-172 304-439 (490)
10 PRK10077 xylE D-xylose transpo 99.1 3.2E-10 6.9E-15 99.0 8.1 131 46-176 324-471 (479)
11 TIGR00710 efflux_Bcr_CflA drug 99.1 1.5E-09 3.2E-14 91.6 10.9 124 44-167 56-185 (385)
12 KOG0254|consensus 99.0 1.2E-09 2.6E-14 97.0 9.9 135 44-178 345-499 (513)
13 PRK10473 multidrug efflux syst 99.0 4.6E-09 1E-13 89.5 10.4 124 44-167 54-183 (392)
14 TIGR00887 2A0109 phosphate:H+ 99.0 1.6E-09 3.5E-14 95.7 7.5 124 43-166 71-228 (502)
15 PRK11102 bicyclomycin/multidru 99.0 6.7E-09 1.4E-13 87.7 10.8 123 44-166 42-170 (377)
16 PRK03545 putative arabinose tr 98.9 7.5E-09 1.6E-13 88.3 10.8 122 44-165 60-187 (390)
17 COG2814 AraJ Arabinose efflux 98.9 1.7E-08 3.7E-13 86.4 12.7 118 46-163 66-189 (394)
18 PRK11551 putative 3-hydroxyphe 98.9 2.8E-09 6E-14 91.1 7.7 123 44-166 66-194 (406)
19 KOG0255|consensus 98.9 1.8E-08 3.9E-13 89.4 12.9 136 44-179 366-509 (521)
20 TIGR00880 2_A_01_02 Multidrug 98.9 6.9E-09 1.5E-13 74.5 7.9 122 44-165 14-141 (141)
21 PRK15402 multidrug efflux syst 98.9 1E-08 2.3E-13 87.8 9.8 124 44-167 64-193 (406)
22 TIGR00893 2A0114 d-galactonate 98.9 4.9E-09 1.1E-13 87.7 7.6 123 44-166 45-173 (399)
23 PRK09952 shikimate transporter 98.9 6E-09 1.3E-13 90.7 8.0 120 47-166 305-436 (438)
24 PRK10213 nepI ribonucleoside t 98.9 1.7E-08 3.7E-13 86.7 10.7 122 45-166 72-199 (394)
25 PRK11663 regulatory protein Uh 98.9 2.3E-08 4.9E-13 86.9 11.4 122 44-165 74-201 (434)
26 TIGR01299 synapt_SV2 synaptic 98.9 5.1E-09 1.1E-13 96.7 7.5 123 44-166 218-358 (742)
27 PRK15403 multidrug efflux syst 98.9 1.9E-08 4.2E-13 86.9 10.6 124 44-167 67-196 (413)
28 TIGR00879 SP MFS transporter, 98.9 2.8E-09 6.1E-14 91.6 5.0 127 45-171 336-479 (481)
29 PRK10077 xylE D-xylose transpo 98.8 5E-09 1.1E-13 91.5 6.5 123 44-166 71-218 (479)
30 PRK10091 MFS transport protein 98.8 2.5E-08 5.5E-13 85.0 10.4 123 44-166 54-182 (382)
31 TIGR00891 2A0112 putative sial 98.8 1.3E-08 2.7E-13 86.3 8.5 123 44-166 63-192 (405)
32 KOG0255|consensus 98.8 2.2E-08 4.7E-13 88.9 10.1 121 44-166 134-258 (521)
33 PRK03699 putative transporter; 98.8 5.1E-09 1.1E-13 89.6 5.8 117 44-160 58-180 (394)
34 PRK15075 citrate-proton sympor 98.8 1.3E-08 2.8E-13 88.3 8.4 123 43-165 71-214 (434)
35 PRK10642 proline/glycine betai 98.8 9E-09 2E-13 90.8 7.3 124 43-166 72-216 (490)
36 TIGR02332 HpaX 4-hydroxyphenyl 98.8 2.2E-08 4.7E-13 86.5 9.5 124 44-167 59-194 (412)
37 TIGR00900 2A0121 H+ Antiporter 98.8 3.2E-08 6.9E-13 82.4 9.8 118 44-161 50-177 (365)
38 TIGR00883 2A0106 metabolite-pr 98.8 2E-08 4.4E-13 84.3 7.6 124 43-166 50-194 (394)
39 PRK10406 alpha-ketoglutarate t 98.8 1.2E-08 2.7E-13 88.4 6.3 124 46-170 297-430 (432)
40 TIGR00879 SP MFS transporter, 98.8 1.8E-08 3.9E-13 86.6 7.1 123 44-166 87-220 (481)
41 TIGR00903 2A0129 major facilit 98.8 2.4E-08 5.3E-13 85.2 7.8 122 44-166 42-169 (368)
42 PRK10406 alpha-ketoglutarate t 98.8 1.5E-08 3.3E-13 87.9 6.2 125 43-167 78-223 (432)
43 PLN00028 nitrate transmembrane 98.7 2.5E-08 5.4E-13 87.9 7.0 119 44-163 87-219 (476)
44 TIGR00890 2A0111 Oxalate/Forma 98.7 2.9E-08 6.2E-13 82.9 6.6 116 44-160 54-174 (377)
45 TIGR00711 efflux_EmrB drug res 98.7 5.6E-08 1.2E-12 84.8 8.2 124 44-167 53-182 (485)
46 PRK10489 enterobactin exporter 98.7 1.1E-07 2.4E-12 81.8 9.4 123 44-166 68-200 (417)
47 TIGR00894 2A0114euk Na(+)-depe 98.7 4.3E-08 9.3E-13 85.6 6.7 119 44-162 92-218 (465)
48 PRK10054 putative transporter; 98.7 1.2E-07 2.5E-12 81.5 9.1 123 44-166 59-186 (395)
49 COG2271 UhpC Sugar phosphate p 98.6 1.7E-08 3.6E-13 86.5 3.3 116 46-161 82-204 (448)
50 PRK11646 multidrug resistance 98.6 2.9E-07 6.3E-12 79.2 10.8 121 45-165 63-188 (400)
51 TIGR00895 2A0115 benzoate tran 98.6 3.7E-08 8E-13 83.0 5.1 123 44-166 68-196 (398)
52 PRK09874 drug efflux system pr 98.6 2.8E-07 6.1E-12 78.6 10.5 121 44-165 70-196 (408)
53 cd06174 MFS The Major Facilita 98.6 3.1E-08 6.7E-13 81.7 4.4 157 44-200 50-237 (352)
54 PRK09952 shikimate transporter 98.6 5.1E-08 1.1E-12 84.9 5.9 123 44-166 80-223 (438)
55 KOG0569|consensus 98.6 6.7E-08 1.4E-12 85.0 6.4 124 44-167 76-209 (485)
56 TIGR00886 2A0108 nitrite extru 98.6 2.1E-07 4.7E-12 78.0 9.2 90 44-134 53-146 (366)
57 PRK12307 putative sialic acid 98.6 6.2E-08 1.3E-12 83.3 6.0 123 44-166 69-196 (426)
58 PRK11195 lysophospholipid tran 98.6 2.7E-07 5.9E-12 79.2 9.6 120 44-166 54-177 (393)
59 PRK09705 cynX putative cyanate 98.6 1.3E-07 2.8E-12 81.1 7.6 112 44-156 60-177 (393)
60 TIGR00881 2A0104 phosphoglycer 98.6 2.7E-08 5.8E-13 83.2 3.3 123 43-165 45-174 (379)
61 PRK14995 methyl viologen resis 98.6 4.1E-07 8.9E-12 80.4 10.9 123 45-167 58-187 (495)
62 PRK11043 putative transporter; 98.6 4.4E-07 9.5E-12 77.6 10.8 122 44-165 57-183 (401)
63 TIGR00712 glpT glycerol-3-phos 98.6 1.9E-07 4.1E-12 81.2 8.2 122 44-165 77-209 (438)
64 PRK03893 putative sialic acid 98.6 9.9E-08 2.1E-12 83.7 6.3 123 44-166 71-198 (496)
65 PRK08633 2-acyl-glycerophospho 98.6 6.4E-07 1.4E-11 86.2 12.3 91 44-134 63-159 (1146)
66 PRK11273 glpT sn-glycerol-3-ph 98.6 3.3E-07 7.2E-12 80.0 9.5 122 44-165 79-211 (452)
67 PRK05122 major facilitator sup 98.6 2.4E-07 5.2E-12 79.1 8.1 127 46-172 267-398 (399)
68 PF07690 MFS_1: Major Facilita 98.5 2.3E-07 5.1E-12 76.9 7.5 115 44-158 48-167 (352)
69 PRK06814 acylglycerophosphoeth 98.5 4.3E-07 9.3E-12 87.7 10.2 123 44-166 68-198 (1140)
70 PRK10489 enterobactin exporter 98.5 3.3E-07 7.1E-12 78.9 8.0 131 47-177 278-414 (417)
71 PRK15462 dipeptide/tripeptide 98.5 1.5E-07 3.3E-12 83.3 5.5 116 44-159 61-185 (493)
72 KOG0254|consensus 98.5 1.9E-07 4E-12 83.0 6.0 124 44-167 105-234 (513)
73 PRK11652 emrD multidrug resist 98.5 1.4E-06 3E-11 74.3 11.0 124 44-167 59-188 (394)
74 PRK12382 putative transporter; 98.5 1.3E-06 2.8E-11 74.5 10.6 108 44-151 67-187 (392)
75 PRK05122 major facilitator sup 98.5 1.3E-06 2.7E-11 74.6 10.1 121 44-164 67-200 (399)
76 PRK10504 putative transporter; 98.5 9.8E-07 2.1E-11 77.1 9.6 122 44-165 61-188 (471)
77 PRK11010 ampG muropeptide tran 98.5 2.8E-06 6.1E-11 75.2 12.4 123 44-166 61-198 (491)
78 TIGR00899 2A0120 sugar efflux 98.5 1.8E-06 3.8E-11 72.6 10.7 122 45-166 50-180 (375)
79 KOG1330|consensus 98.5 3.4E-09 7.3E-14 91.5 -6.0 120 45-164 85-211 (493)
80 PRK15075 citrate-proton sympor 98.4 5.6E-07 1.2E-11 78.1 6.2 129 44-172 290-429 (434)
81 PRK10207 dipeptide/tripeptide 98.4 2E-06 4.3E-11 76.3 9.1 111 46-156 68-187 (489)
82 TIGR00903 2A0129 major facilit 98.4 3E-06 6.5E-11 72.4 9.7 83 82-165 284-367 (368)
83 TIGR00897 2A0118 polyol permea 98.4 1.2E-06 2.7E-11 75.1 7.4 100 44-143 64-173 (402)
84 PRK09556 uhpT sugar phosphate 98.4 7.2E-07 1.6E-11 78.2 6.0 118 45-162 311-448 (467)
85 KOG2532|consensus 98.3 1.6E-06 3.4E-11 76.5 7.8 119 44-162 89-215 (466)
86 TIGR00889 2A0110 nucleoside tr 98.3 4.8E-06 1E-10 72.2 10.7 122 47-168 270-408 (418)
87 TIGR00896 CynX cyanate transpo 98.3 1.4E-06 3E-11 73.3 6.9 109 44-154 51-166 (355)
88 PRK15011 sugar efflux transpor 98.3 1.3E-06 2.8E-11 74.8 6.4 119 46-165 270-393 (393)
89 PF00083 Sugar_tr: Sugar (and 98.3 4.9E-09 1.1E-13 90.9 -9.2 125 42-166 60-195 (451)
90 TIGR00924 yjdL_sub1_fam amino 98.3 2.1E-06 4.5E-11 75.8 7.3 118 44-161 64-190 (475)
91 PRK03633 putative MFS family t 98.3 4.1E-06 9E-11 71.3 8.5 91 44-134 57-150 (381)
92 PRK11273 glpT sn-glycerol-3-ph 98.3 2.9E-06 6.2E-11 74.1 7.7 72 96-167 365-441 (452)
93 TIGR00885 fucP L-fucose:H+ sym 98.3 8.4E-06 1.8E-10 70.6 10.3 122 44-165 54-211 (410)
94 PRK11551 putative 3-hydroxyphe 98.3 1.5E-06 3.2E-11 74.3 5.6 117 46-162 273-395 (406)
95 TIGR00899 2A0120 sugar efflux 98.2 3.3E-06 7E-11 71.0 7.3 118 46-164 253-375 (375)
96 TIGR00890 2A0111 Oxalate/Forma 98.2 1.1E-06 2.5E-11 73.3 4.4 112 45-156 257-375 (377)
97 cd06174 MFS The Major Facilita 98.2 2.6E-06 5.6E-11 70.2 6.3 118 44-161 227-350 (352)
98 PRK11663 regulatory protein Uh 98.2 6.2E-06 1.3E-10 71.6 8.8 75 94-168 353-430 (434)
99 TIGR00901 2A0125 AmpG-related 98.2 2.9E-05 6.2E-10 65.2 12.4 122 45-166 38-182 (356)
100 PRK10133 L-fucose transporter; 98.2 5.3E-06 1.2E-10 72.4 8.0 90 45-134 78-173 (438)
101 PRK12307 putative sialic acid 98.2 2.9E-06 6.2E-11 73.0 6.2 97 46-142 284-387 (426)
102 PTZ00207 hypothetical protein; 98.2 5.9E-06 1.3E-10 74.7 8.3 112 47-159 80-201 (591)
103 PRK09556 uhpT sugar phosphate 98.2 1.1E-06 2.3E-11 77.1 3.2 117 44-160 80-209 (467)
104 KOG3764|consensus 98.2 2.9E-06 6.4E-11 72.5 5.4 122 45-166 123-251 (464)
105 PRK09528 lacY galactoside perm 98.2 2E-06 4.4E-11 74.1 4.4 119 46-164 280-405 (420)
106 PRK12382 putative transporter; 98.2 6.9E-06 1.5E-10 70.0 7.6 116 46-161 267-387 (392)
107 TIGR00892 2A0113 monocarboxyla 98.2 3.7E-06 8.1E-11 73.6 6.0 117 44-161 70-192 (455)
108 TIGR00806 rfc RFC reduced fola 98.1 9.6E-06 2.1E-10 71.4 8.3 117 46-163 80-203 (511)
109 PRK03893 putative sialic acid 98.1 2.7E-06 5.9E-11 74.6 3.7 107 44-150 327-440 (496)
110 KOG2615|consensus 98.1 3.4E-06 7.3E-11 71.8 3.9 117 49-166 89-217 (451)
111 PRK15011 sugar efflux transpor 98.1 4.4E-05 9.6E-10 65.3 10.7 120 46-166 70-198 (393)
112 PF06609 TRI12: Fungal trichot 98.1 2.1E-05 4.5E-10 71.1 8.9 112 46-158 96-212 (599)
113 PRK09705 cynX putative cyanate 98.0 1.4E-05 3E-10 68.5 7.3 125 45-171 257-390 (393)
114 COG2223 NarK Nitrate/nitrite t 98.0 2.9E-05 6.2E-10 66.7 9.0 113 47-161 68-191 (417)
115 PRK15034 nitrate/nitrite trans 98.0 0.00011 2.4E-09 64.8 12.0 86 48-134 90-183 (462)
116 TIGR00893 2A0114 d-galactonate 98.0 1E-05 2.3E-10 67.5 5.0 69 91-159 324-395 (399)
117 PRK09584 tppB putative tripept 98.0 3.6E-05 7.7E-10 68.4 8.5 111 46-156 75-194 (500)
118 PRK11902 ampG muropeptide tran 98.0 0.00013 2.7E-09 62.7 11.6 123 44-166 48-185 (402)
119 PF05977 MFS_3: Transmembrane 97.9 8.7E-05 1.9E-09 66.4 10.3 117 46-162 63-189 (524)
120 PRK03545 putative arabinose tr 97.9 4E-05 8.6E-10 65.4 7.3 117 45-162 258-379 (390)
121 TIGR00883 2A0106 metabolite-pr 97.9 8.5E-06 1.8E-10 68.4 3.0 104 47-150 274-388 (394)
122 TIGR00792 gph sugar (Glycoside 97.9 0.00023 5E-09 61.3 11.8 124 43-166 50-198 (437)
123 PRK03699 putative transporter; 97.8 1.7E-05 3.8E-10 67.8 4.3 119 46-165 259-382 (394)
124 PRK09874 drug efflux system pr 97.8 3.1E-05 6.7E-10 66.0 5.5 114 48-161 278-396 (408)
125 PLN00028 nitrate transmembrane 97.8 1.3E-05 2.9E-10 70.6 3.2 117 45-162 305-432 (476)
126 TIGR00891 2A0112 putative sial 97.8 1.9E-05 4.1E-10 66.8 3.7 95 46-140 292-392 (405)
127 PRK03633 putative MFS family t 97.7 0.00017 3.6E-09 61.4 8.7 117 45-162 252-371 (381)
128 TIGR00712 glpT glycerol-3-phos 97.7 5.1E-05 1.1E-09 66.0 5.3 67 100-166 367-437 (438)
129 PRK11128 putative 3-phenylprop 97.7 8.8E-05 1.9E-09 63.2 6.5 120 44-165 55-181 (382)
130 KOG2533|consensus 97.7 5.4E-05 1.2E-09 67.2 5.2 123 44-166 97-231 (495)
131 TIGR00805 oat sodium-independe 97.7 5.8E-05 1.3E-09 69.1 5.3 85 81-165 175-283 (633)
132 PRK11010 ampG muropeptide tran 97.7 8.2E-05 1.8E-09 65.9 5.8 122 44-165 275-405 (491)
133 TIGR02332 HpaX 4-hydroxyphenyl 97.6 7.1E-05 1.5E-09 64.6 5.2 55 96-150 351-408 (412)
134 TIGR00897 2A0118 polyol permea 97.6 0.00028 6.1E-09 60.5 7.8 116 45-162 274-400 (402)
135 PF11700 ATG22: Vacuole efflux 97.6 0.00017 3.7E-09 63.8 6.5 126 43-168 332-473 (477)
136 TIGR00895 2A0115 benzoate tran 97.6 9.7E-05 2.1E-09 62.1 4.7 89 46-134 303-394 (398)
137 TIGR01272 gluP glucose/galacto 97.5 0.00084 1.8E-08 56.0 9.8 91 77-167 9-119 (310)
138 PRK10504 putative transporter; 97.5 0.00088 1.9E-08 58.5 10.0 88 47-134 316-409 (471)
139 PF13347 MFS_2: MFS/sugar tran 97.5 0.0014 3.1E-08 56.7 11.0 120 45-164 54-200 (428)
140 KOG0253|consensus 97.4 0.00053 1.1E-08 58.7 7.4 124 44-169 129-257 (528)
141 KOG2816|consensus 97.4 0.00028 6.1E-09 62.2 5.9 121 47-170 81-207 (463)
142 TIGR02718 sider_RhtX_FptX side 97.4 0.0042 9E-08 52.9 12.7 116 48-163 59-184 (390)
143 TIGR01301 GPH_sucrose GPH fami 97.4 0.003 6.4E-08 56.1 11.9 79 88-166 124-222 (477)
144 TIGR00792 gph sugar (Glycoside 97.3 0.00061 1.3E-08 58.7 6.8 88 47-134 276-374 (437)
145 PRK09528 lacY galactoside perm 97.3 0.00022 4.9E-09 61.4 3.7 52 111-162 138-190 (420)
146 PRK15034 nitrate/nitrite trans 97.3 0.00082 1.8E-08 59.3 7.3 117 45-161 303-452 (462)
147 TIGR00902 2A0127 phenyl propri 97.3 0.00071 1.5E-08 57.7 6.7 112 46-159 258-375 (382)
148 TIGR00882 2A0105 oligosacchari 97.2 0.0022 4.7E-08 54.8 8.8 112 48-159 274-391 (396)
149 PF01306 LacY_symp: LacY proto 97.2 0.0019 4.1E-08 56.1 8.2 122 48-169 279-407 (412)
150 COG2271 UhpC Sugar phosphate p 97.2 0.00022 4.9E-09 61.5 2.5 119 42-160 302-431 (448)
151 TIGR02718 sider_RhtX_FptX side 97.2 0.001 2.2E-08 56.7 6.6 114 45-158 261-386 (390)
152 PF06813 Nodulin-like: Nodulin 97.2 0.00077 1.7E-08 54.8 5.4 116 46-162 54-181 (250)
153 KOG2504|consensus 97.1 0.00063 1.4E-08 60.8 5.0 116 46-162 99-220 (509)
154 TIGR00892 2A0113 monocarboxyla 97.1 0.00059 1.3E-08 59.8 4.3 81 77-157 332-415 (455)
155 TIGR00902 2A0127 phenyl propri 97.1 0.0055 1.2E-07 52.2 9.9 104 46-151 57-167 (382)
156 PRK11462 putative transporter; 97.0 0.019 4.1E-07 50.5 13.1 55 80-134 111-166 (460)
157 TIGR00882 2A0105 oligosacchari 97.0 0.0006 1.3E-08 58.3 3.5 116 44-161 54-181 (396)
158 TIGR00900 2A0121 H+ Antiporter 97.0 0.0049 1.1E-07 51.1 8.9 87 48-134 267-357 (365)
159 TIGR00710 efflux_Bcr_CflA drug 96.9 0.0031 6.8E-08 53.0 6.9 91 45-136 259-358 (385)
160 PRK11102 bicyclomycin/multidru 96.9 0.0031 6.7E-08 53.1 6.7 89 46-135 248-344 (377)
161 TIGR00881 2A0104 phosphoglycer 96.8 0.0009 1.9E-08 55.7 3.1 58 85-142 317-376 (379)
162 PRK08633 2-acyl-glycerophospho 96.8 0.0019 4.1E-08 62.5 5.7 90 45-134 286-378 (1146)
163 PF03825 Nuc_H_symport: Nucleo 96.8 0.021 4.6E-07 49.5 11.6 54 89-142 312-368 (400)
164 TIGR00894 2A0114euk Na(+)-depe 96.8 0.00081 1.7E-08 58.7 2.7 85 85-170 368-457 (465)
165 PRK10091 MFS transport protein 96.8 0.014 3E-07 49.7 10.2 117 44-162 251-375 (382)
166 COG2223 NarK Nitrate/nitrite t 96.8 0.0027 5.9E-08 54.8 5.4 116 46-162 272-400 (417)
167 PRK09669 putative symporter Ya 96.7 0.12 2.6E-06 45.0 15.5 122 44-165 61-207 (444)
168 TIGR00788 fbt folate/biopterin 96.7 0.012 2.7E-07 51.9 9.2 120 46-166 78-212 (468)
169 PRK10054 putative transporter; 96.6 0.025 5.4E-07 48.5 10.3 108 50-158 266-379 (395)
170 PF05631 DUF791: Protein of un 96.6 0.088 1.9E-06 44.8 13.2 120 48-168 89-222 (354)
171 PRK11902 ampG muropeptide tran 96.6 0.0063 1.4E-07 52.1 6.5 118 44-165 262-392 (402)
172 COG2270 Permeases of the major 96.5 0.0018 3.8E-08 56.1 2.8 126 43-168 303-434 (438)
173 TIGR00901 2A0125 AmpG-related 96.5 0.0011 2.4E-08 55.6 1.5 80 44-123 261-354 (356)
174 PF11700 ATG22: Vacuole efflux 96.5 0.078 1.7E-06 47.1 12.9 121 47-167 89-252 (477)
175 TIGR00711 efflux_EmrB drug res 96.5 0.0047 1E-07 53.8 5.2 90 45-134 308-404 (485)
176 TIGR01272 gluP glucose/galacto 96.4 0.0063 1.4E-07 50.8 5.6 100 44-146 194-298 (310)
177 PF05977 MFS_3: Transmembrane 96.4 0.017 3.6E-07 51.9 8.5 93 75-167 304-400 (524)
178 COG0738 FucP Fucose permease [ 96.4 0.011 2.5E-07 50.9 7.0 89 46-134 66-160 (422)
179 PF07690 MFS_1: Major Facilita 96.4 0.013 2.9E-07 48.3 7.2 85 47-131 262-352 (352)
180 PRK15402 multidrug efflux syst 96.1 0.014 3E-07 49.9 6.2 88 46-134 269-364 (406)
181 PRK10429 melibiose:sodium symp 96.1 0.23 4.9E-06 43.7 13.9 90 45-134 59-163 (473)
182 COG3104 PTR2 Dipeptide/tripept 96.1 0.0033 7.2E-08 55.4 2.2 118 46-163 79-206 (498)
183 TIGR00788 fbt folate/biopterin 96.0 0.044 9.6E-07 48.4 8.8 83 82-164 355-447 (468)
184 PRK11128 putative 3-phenylprop 96.0 0.15 3.2E-06 43.3 11.7 108 48-157 260-373 (382)
185 PRK11646 multidrug resistance 95.9 0.04 8.7E-07 47.4 8.0 73 86-158 305-383 (400)
186 PRK11195 lysophospholipid tran 95.8 0.029 6.3E-07 48.1 6.5 122 49-170 262-389 (393)
187 PRK11043 putative transporter; 95.6 0.031 6.7E-07 47.7 6.2 49 85-134 303-351 (401)
188 TIGR00889 2A0110 nucleoside tr 95.6 0.021 4.5E-07 49.6 5.1 42 125-166 141-183 (418)
189 KOG0252|consensus 95.6 0.0014 3.1E-08 57.3 -2.1 125 43-167 99-250 (538)
190 PRK09669 putative symporter Ya 95.6 0.048 1E-06 47.4 7.2 89 46-134 282-382 (444)
191 KOG3762|consensus 95.5 0.0037 8E-08 55.8 -0.0 118 43-160 421-544 (618)
192 PF03209 PUCC: PUCC protein; 95.5 0.24 5.3E-06 42.9 10.9 60 85-144 96-157 (403)
193 TIGR00886 2A0108 nitrite extru 95.4 0.009 2E-07 49.9 2.1 82 44-126 277-365 (366)
194 PRK14995 methyl viologen resis 95.3 0.021 4.6E-07 50.5 4.1 90 45-134 312-407 (495)
195 COG2814 AraJ Arabinose efflux 95.2 0.21 4.6E-06 43.3 9.7 118 43-162 262-385 (394)
196 PRK10473 multidrug efflux syst 94.9 0.037 8.1E-07 47.0 4.5 19 46-64 257-275 (392)
197 PRK10133 L-fucose transporter; 94.9 0.05 1.1E-06 47.5 5.4 99 46-147 313-417 (438)
198 TIGR00885 fucP L-fucose:H+ sym 94.9 0.05 1.1E-06 47.1 5.2 88 44-134 285-375 (410)
199 PRK09848 glucuronide transport 94.9 0.51 1.1E-05 41.0 11.5 87 48-134 284-382 (448)
200 KOG4686|consensus 94.8 0.076 1.6E-06 44.4 5.7 88 45-134 317-408 (459)
201 TIGR00924 yjdL_sub1_fam amino 94.7 0.4 8.7E-06 42.4 10.4 85 76-160 379-465 (475)
202 PRK10429 melibiose:sodium symp 94.6 0.41 8.9E-06 42.1 10.3 87 48-134 286-387 (473)
203 KOG2504|consensus 94.6 0.044 9.6E-07 49.1 4.2 122 42-163 347-476 (509)
204 PRK11652 emrD multidrug resist 94.2 0.63 1.4E-05 39.5 10.3 53 81-134 302-354 (394)
205 PRK10213 nepI ribonucleoside t 94.1 0.2 4.2E-06 43.0 7.0 75 81-156 308-384 (394)
206 PRK09584 tppB putative tripept 93.8 0.45 9.7E-06 42.4 8.9 56 78-133 382-437 (500)
207 PRK06814 acylglycerophosphoeth 93.8 0.11 2.4E-06 50.6 5.4 54 81-134 337-390 (1140)
208 COG0477 ProP Permeases of the 93.6 1.2 2.7E-05 34.6 10.4 91 44-134 55-152 (338)
209 KOG2563|consensus 93.5 0.28 6E-06 43.2 6.8 88 46-134 97-196 (480)
210 TIGR00896 CynX cyanate transpo 93.0 0.17 3.8E-06 42.3 4.9 49 86-134 293-342 (355)
211 TIGR01301 GPH_sucrose GPH fami 91.4 1.2 2.5E-05 39.8 8.2 89 79-167 381-476 (477)
212 PF13347 MFS_2: MFS/sugar tran 91.2 0.61 1.3E-05 40.3 6.2 89 46-134 278-378 (428)
213 PRK10207 dipeptide/tripeptide 91.1 0.84 1.8E-05 40.6 7.1 58 77-134 378-435 (489)
214 PRK11462 putative transporter; 91.0 0.62 1.4E-05 41.0 6.1 91 44-134 279-381 (460)
215 PF03092 BT1: BT1 family; Int 90.6 2.3 5.1E-05 37.2 9.3 126 36-164 34-177 (433)
216 PF05978 UNC-93: Ion channel r 90.3 1.3 2.7E-05 33.4 6.5 87 48-134 57-145 (156)
217 COG2211 MelB Na+/melibiose sym 90.2 3.9 8.4E-05 36.4 10.2 88 78-165 112-210 (467)
218 PRK09848 glucuronide transport 88.2 16 0.00035 31.6 14.4 46 89-134 120-171 (448)
219 TIGR00926 2A1704 Peptide:H+ sy 86.9 8 0.00017 35.9 10.5 77 84-160 91-179 (654)
220 KOG2533|consensus 84.8 0.52 1.1E-05 42.2 1.6 116 32-147 310-440 (495)
221 COG2211 MelB Na+/melibiose sym 82.9 6.3 0.00014 35.1 7.6 86 49-134 293-390 (467)
222 PF00854 PTR2: POT family; In 81.7 12 0.00025 31.8 8.7 82 80-161 35-121 (372)
223 PF03092 BT1: BT1 family; Int 81.3 11 0.00024 33.0 8.5 78 90-167 330-417 (433)
224 PRK15403 multidrug efflux syst 78.4 43 0.00092 28.8 11.8 44 112-155 345-389 (413)
225 COG2270 Permeases of the major 75.8 10 0.00022 33.4 6.4 88 47-134 77-171 (438)
226 PTZ00207 hypothetical protein; 73.2 25 0.00053 32.4 8.6 83 79-162 453-551 (591)
227 PF03825 Nuc_H_symport: Nucleo 72.0 16 0.00035 31.7 6.9 13 46-58 55-67 (400)
228 PRK15462 dipeptide/tripeptide 69.4 60 0.0013 29.1 10.0 58 77-134 376-434 (493)
229 COG2807 CynX Cyanate permease 67.4 84 0.0018 27.3 10.4 127 34-161 51-184 (395)
230 KOG2325|consensus 67.1 35 0.00076 30.6 8.0 88 77-165 129-232 (488)
231 TIGR00769 AAA ADP/ATP carrier 67.0 95 0.0021 27.8 10.8 51 84-134 134-185 (472)
232 KOG2532|consensus 63.9 22 0.00047 31.6 6.1 54 108-161 387-445 (466)
233 KOG4332|consensus 61.9 35 0.00076 28.8 6.5 105 49-154 93-211 (454)
234 COG0738 FucP Fucose permease [ 61.1 4.7 0.0001 35.2 1.4 73 80-154 326-400 (422)
235 PF06379 RhaT: L-rhamnose-prot 59.8 64 0.0014 27.6 7.8 30 95-124 78-107 (344)
236 PF01770 Folate_carrier: Reduc 54.2 1.5E+02 0.0033 26.0 11.7 118 47-165 60-184 (412)
237 PF01306 LacY_symp: LacY proto 52.8 23 0.0005 31.0 4.3 49 114-162 138-187 (412)
238 KOG1330|consensus 50.3 9.4 0.0002 34.0 1.5 53 82-134 353-406 (493)
239 KOG3098|consensus 46.9 30 0.00065 30.8 4.1 83 48-130 70-154 (461)
240 KOG3098|consensus 45.6 1.4E+02 0.0031 26.6 8.1 43 82-125 357-399 (461)
241 KOG2563|consensus 41.4 4.4 9.6E-05 35.9 -1.8 88 84-171 365-459 (480)
242 PF08611 DUF1774: Fungal prote 35.1 1.3E+02 0.0028 20.8 4.9 32 129-160 40-71 (97)
243 PF06609 TRI12: Fungal trichot 33.0 2.3E+02 0.0049 26.3 7.6 56 79-134 406-461 (599)
244 KOG3764|consensus 30.8 92 0.002 27.6 4.5 116 44-159 322-450 (464)
245 PF04281 Tom22: Mitochondrial 28.0 1.9E+02 0.0041 21.3 5.2 22 103-124 60-81 (137)
246 PF07274 DUF1440: Protein of u 24.2 1.3E+02 0.0028 22.1 3.6 36 87-122 57-92 (135)
247 KOG2615|consensus 23.9 2.3E+02 0.0051 25.0 5.7 50 89-138 363-413 (451)
248 MTH00213 ND6 NADH dehydrogenas 22.5 2.1E+02 0.0046 22.8 4.7 18 181-198 102-119 (239)
249 KOG2816|consensus 22.0 5.7E+02 0.012 22.8 8.3 52 83-134 335-386 (463)
250 KOG4686|consensus 21.3 62 0.0013 27.6 1.7 84 46-129 97-187 (459)
251 COG1593 DctQ TRAP-type C4-dica 20.7 5.4E+02 0.012 22.4 7.3 92 104-195 149-243 (379)
252 TIGR00986 3a0801s05tom22 mitoc 20.6 2.6E+02 0.0057 20.8 4.7 22 103-124 58-79 (145)
No 1
>KOG0253|consensus
Probab=99.71 E-value=2.2e-18 Score=144.15 Aligned_cols=149 Identities=21% Similarity=0.377 Sum_probs=119.5
Q ss_pred CCCCcccccccccceeeeeecCCCCeeeEEEEEecccchhHHHHHhHhhhhhh-cc--ccchHHHHHHHHHHHHHHhhhh
Q psy10821 20 VEINGTVLDWNSTEVLTWIHKKDDGKFESCRMFDAFTNKTMTCHSWVYDKTYY-KT--SRTMEYILYIVFFGKFCIAGSF 96 (200)
Q Consensus 20 ~~~~~~~~~w~~~~~~~~~p~~~~G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~ 96 (200)
+.++...+++++.. -.|+. |-||..+++.++||+|||..++..++...+.. .. ..+........+...++.++.+
T Consensus 375 ~c~~s~~~dYrdll-itsla-efPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~f 452 (528)
T KOG0253|consen 375 NCPLSVAKDYRDLL-ITSLA-EFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAF 452 (528)
T ss_pred cCCccchhHHHHHH-HHHHh-hCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchh
Confidence 34566667775543 12222 35799999999999999988776555433322 21 2233455666777889999999
Q ss_pred hhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHhhcc-cCCCCCc
Q psy10821 97 AVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIGLMDSFDKRIPTTIFATITLMSGILSTFLP-ETWNMVC 170 (200)
Q Consensus 97 ~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp-et~~~~l 170 (200)
.+.|+|.+|.|||.+|++|+|.+..++++++++.|++++..+.....+..+++.+++++++++.++| |||||++
T Consensus 453 qvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 453 QVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred eEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 9999999999999999999999999999999999999988888888999999999999999999987 9999875
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.48 E-value=6.4e-14 Score=128.75 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=99.3
Q ss_pred CCCeeeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 42 DDGKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 42 ~~G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
.+|.++++++.||+|||+++..+.+...+. .....+..+++...++..++..+.++..+.+++|+||++.|++++|+
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi 688 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGF 688 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 357788899999999998776544333222 12223334445555566667777888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhcccCCCCCc
Q psy10821 119 GSMCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFLPETWNMVC 170 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l 170 (200)
.+.+++++++++|++. .+...+...++++.+++.++++++.+++|||+++.+
T Consensus 689 ~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 689 LNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 9999999999999998 444455667888888888888888888899998765
No 3
>TIGR00898 2A0119 cation transport protein.
Probab=99.46 E-value=3e-13 Score=119.07 Aligned_cols=119 Identities=19% Similarity=0.155 Sum_probs=87.9
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.||+|||+.+..+...... ......+...+.+..++.+++.++.......+++|.+|.+.|+...++....
T Consensus 145 ~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~ 224 (505)
T TIGR00898 145 FVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVF 224 (505)
T ss_pred HhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHH
Confidence 3457788999999877654332222 1222445666777778888888888999999999999999999999998666
Q ss_pred HHHHHHHHHHHHH-HhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 123 ARLSAALTPLIGL-MDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 123 ~~i~~~~~p~i~~-~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
..++..+.|.+.. ..+ |+..+++.++..++..+..+++||+.
T Consensus 225 ~~~g~~~~~~~~~~~~~--wr~~~~~~~i~~~~~~~~~~~~~esp 267 (505)
T TIGR00898 225 FSLGLVLLPLVAYFIPD--WRWLQLAVSLPTFLFFLLSWFVPESP 267 (505)
T ss_pred HHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 6678888888773 333 77788888777777777777788864
No 4
>KOG0252|consensus
Probab=99.44 E-value=1.3e-13 Score=118.27 Aligned_cols=136 Identities=18% Similarity=0.211 Sum_probs=106.6
Q ss_pred CCCeeeEEEEEecccchhHHHHHhHhhhhhhcc---c-----cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHh
Q psy10821 42 DDGKFESCRMFDAFTNKTMTCHSWVYDKTYYKT---S-----RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRN 113 (200)
Q Consensus 42 ~~G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~ 113 (200)
.||+.+...++|++|||...+.++++....... . ......+...+...+.+.+.++...++.+|.||+++|+
T Consensus 362 vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~ 441 (538)
T KOG0252|consen 362 VPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRS 441 (538)
T ss_pred CCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhh
Confidence 469999999999999998777655544332221 1 11223345555566778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--Hh-----hcCchHHHHHHHHHHHHHHHHHhhcccCCCCCchHHHHHH
Q psy10821 114 TGLGVGSMCARLSAALTPLIGL--MD-----SFDKRIPTTIFATITLMSGILSTFLPETWNMVCDRRWMLA 177 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~~--~~-----~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l~~~~~~~ 177 (200)
++.|++.+.|.+|++++.+.+. .+ ..+....+++++.++.+..+..+++||||+++++|...+.
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEE 512 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChh
Confidence 9999999999999999999883 33 3456678888888998888889999999999999865444
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.43 E-value=1.4e-13 Score=121.49 Aligned_cols=132 Identities=17% Similarity=0.185 Sum_probs=87.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hc--c-c-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YK--T-S-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~--~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
|.++++++.||+|||+.++.+....... .. . . ..........+...++..+..+..+.+.+|+||++.|+++.
T Consensus 351 g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~ 430 (502)
T TIGR00887 351 GYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAH 430 (502)
T ss_pred HHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHH
Confidence 3445567999999997765433222111 00 0 1 11111122212222334456677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-H-Hhh----------cCchHHHHHHHHHHHHHHHHHhhcccCCCCCchHHHH
Q psy10821 117 GVGSMCARLSAALTPLIG-L-MDS----------FDKRIPTTIFATITLMSGILSTFLPETWNMVCDRRWM 175 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~-~-~~~----------~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l~~~~~ 175 (200)
++...+++++++++|++. . .+. .+....+++++++++++.+..+++|||+++++||..+
T Consensus 431 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 431 GISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELSG 501 (502)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhhC
Confidence 999999999999999998 3 332 2234567777877777766666779999999877543
No 6
>TIGR00898 2A0119 cation transport protein.
Probab=99.35 E-value=1.3e-12 Score=115.00 Aligned_cols=129 Identities=28% Similarity=0.460 Sum_probs=97.0
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hc-cccc-hHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YK-TSRT-MEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~-~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
|.++.+.+.||+|||..+.......... .. .... ..+.....++..++....++..+.+.+|++|++.|++++|+
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~ 450 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGV 450 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhH
Confidence 4445567889999997665443322211 11 1222 23344455556667777888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q psy10821 119 GSMCARLSAALTPLIGLMDSFDKRIPTTIFATITLMSGILSTFLPETWNMVCDR 172 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l~~ 172 (200)
....+++++.++|++......+...++.++++..+++.+..+++|||++++++|
T Consensus 451 ~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 451 CSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 999999999999998865555667788888888888888888899999998876
No 7
>KOG0569|consensus
Probab=99.31 E-value=3.7e-12 Score=111.58 Aligned_cols=136 Identities=16% Similarity=0.104 Sum_probs=97.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhhhc-------cccch-HHH-----HHHHHHHHHHHhhhhhhHHHhhccccchh
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTYYK-------TSRTM-EYI-----LYIVFFGKFCIAGSFAVIYNYSAELFPTV 110 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~-------~~~~~-~~~-----~~~~~l~~~~~~~~~~~~~~~~sElfPt~ 110 (200)
.++++.+++||.|||+++..+...+..... ..... .|. ....+....+..|..++.|.+.+|+||++
T Consensus 321 ~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~ 400 (485)
T KOG0569|consen 321 STLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQS 400 (485)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCcc
Confidence 346678999999999877654433322111 11111 221 22333344566788899999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH-Hhh-cCchHHHHHHHHHHHHHHHHHh-hcccCCCCCchHHHHHHHhh
Q psy10821 111 LRNTGLGVGSMCARLSAALTPLIGL-MDS-FDKRIPTTIFATITLMSGILST-FLPETWNMVCDRRWMLAVAQ 180 (200)
Q Consensus 111 vR~tg~~l~~~~~~i~~~~~p~i~~-~~~-~~~~~~~~~~~~~~~~~~i~~~-~lpet~~~~l~~~~~~~~~~ 180 (200)
-|..+.+++..++++..++..+.++ +.+ .+. +.++.+.+.+.+..+..+ ++||||||+..|..++-.++
T Consensus 401 ~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 401 ARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999999983 444 444 777888887777766655 47999999999887765543
No 8
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.29 E-value=9.1e-14 Score=120.47 Aligned_cols=134 Identities=21% Similarity=0.269 Sum_probs=89.7
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhh---hhh-----ccccc----hHHHHHHHHH-HHHHHhhhhhhHHHhhccccch
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDK---TYY-----KTSRT----MEYILYIVFF-GKFCIAGSFAVIYNYSAELFPT 109 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~-----~~~~~----~~~~~~~~~l-~~~~~~~~~~~~~~~~sElfPt 109 (200)
.+...+..++||+|||+....+..... ... ..... ..+.+....+ ...+..+..+..+.+.+|+||+
T Consensus 301 ~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt 380 (451)
T PF00083_consen 301 LGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT 380 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccc
Confidence 466777899999999966543322211 111 11111 1112222222 2333446667778999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHH--HhhcCchHHHHHHHHHHHHHHHH-HhhcccCCCCCchHHHHH
Q psy10821 110 VLRNTGLGVGSMCARLSAALTPLIGL--MDSFDKRIPTTIFATITLMSGIL-STFLPETWNMVCDRRWML 176 (200)
Q Consensus 110 ~vR~tg~~l~~~~~~i~~~~~p~i~~--~~~~~~~~~~~~~~~~~~~~~i~-~~~lpet~~~~l~~~~~~ 176 (200)
++|+++.++++.++++++.+.|++.. .+..+....+.++++++++..+. ..++||||+++++|.+++
T Consensus 381 ~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 381 KVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 99999999999999999999999883 33444456666666666665554 455799999999987754
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.18 E-value=6.4e-11 Score=104.43 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=85.8
Q ss_pred eeEEEEEecccchhHHHHHhHh-h---hh--hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVY-D---KT--YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~-~---~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+..+.+.||+|||+.+..+... . .. ....+.+........++..++.....+....+.+|+||++.|+++.++.
T Consensus 304 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 304 PVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA 383 (490)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHH
Confidence 3457788999999765533221 1 11 1111222333333444445555566777888999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-H-Hhhc-CchHHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q psy10821 120 SMCARLSAALTPLIG-L-MDSF-DKRIPTTIFATITLMSGILSTFLPETWNMVCDR 172 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~-~-~~~~-~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l~~ 172 (200)
++++.+++.++|++. . .+.. ++..++++..+.++++.+..+++||++++.+++
T Consensus 384 ~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~ 439 (490)
T PRK10642 384 FNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKG 439 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCC
Confidence 999998888999888 3 3333 356666666777777777777789998876643
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.08 E-value=3.2e-10 Score=98.95 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=84.0
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhh---h--c-cccchH-HHHHHHHHHHHHHh-hhhhhHHHhhccccchhHHhHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTY---Y--K-TSRTME-YILYIVFFGKFCIA-GSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~---~--~-~~~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
++++.+.||+|||..+..+....... . . ...... +.....++..+... ...+..+.+++|.||++.|+++.|
T Consensus 324 ~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g 403 (479)
T PRK10077 324 VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALA 403 (479)
T ss_pred HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHH
Confidence 34457789999997665433322111 0 1 111111 22222222222222 233567899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-H-------hhcCchHHHHHHHHHHHHHHHHHhh-cccCCCCCchHHHHH
Q psy10821 118 VGSMCARLSAALTPLIGL-M-------DSFDKRIPTTIFATITLMSGILSTF-LPETWNMVCDRRWML 176 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~~-~-------~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~~~~l~~~~~~ 176 (200)
+...++++++++++.+.. . +..++...+.++++.++++.++.++ .||+|+++++|..++
T Consensus 404 ~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 404 IAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 999999999888877773 2 2456667777777777777666554 699999988765443
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.06 E-value=1.5e-09 Score=91.57 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=89.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.++.+.+.||+|||+.+..+..... .......+.+......++.++..+...+....+..|.+|.+.|++..++..
T Consensus 56 ~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (385)
T TIGR00710 56 GQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILM 135 (385)
T ss_pred HHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 55778899999999977664332222 111223344455556666667777777888899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet~~ 167 (200)
....++..++|.+. ..+..+|+..+.+.++..++..+... ..||++.
T Consensus 136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999888 35567888888887777666655544 4577654
No 12
>KOG0254|consensus
Probab=99.04 E-value=1.2e-09 Score=96.99 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=89.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh-------hcc-cc------chHH--HHHHHHHHHHHHhhhhhhHHHhhcccc
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY-------YKT-SR------TMEY--ILYIVFFGKFCIAGSFAVIYNYSAELF 107 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~-------~~~-~~------~~~~--~~~~~~l~~~~~~~~~~~~~~~~sElf 107 (200)
+..++.+++||+|||+.++.+....... ... .. ...+ +....+....+..+..++.|.+.+|+|
T Consensus 345 ~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEif 424 (513)
T KOG0254|consen 345 GTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIF 424 (513)
T ss_pred HHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccC
Confidence 3445578999999997766433222111 111 11 1122 233344445666778888999999999
Q ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHH-Hhhc-CchHHHHHHHHHHHHHHH--HHhhcccCCCCCchHHHHHHH
Q psy10821 108 PTVLRNTGLGVGSMCARLSAALTPLIGL-MDSF-DKRIPTTIFATITLMSGI--LSTFLPETWNMVCDRRWMLAV 178 (200)
Q Consensus 108 Pt~vR~tg~~l~~~~~~i~~~~~p~i~~-~~~~-~~~~~~~~~~~~~~~~~i--~~~~lpet~~~~l~~~~~~~~ 178 (200)
|.++|+++.+++..++++.+++.....+ .... +....+.+++..+.+..+ ..+++||||+++++|.++...
T Consensus 425 p~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 425 PLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred cHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHH
Confidence 9999999999999999987777766663 3333 335566666666666555 455579999999998776443
No 13
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.97 E-value=4.6e-09 Score=89.53 Aligned_cols=124 Identities=16% Similarity=0.121 Sum_probs=88.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+........++.++..+..+...+.+.+|.+|.+.|+++.++.+
T Consensus 54 ~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 133 (392)
T PRK10473 54 AMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLN 133 (392)
T ss_pred HHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 45678999999999987664332221 112223344455555566666666777788999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHHHH-hhcccCCC
Q psy10821 121 MCARLSAALTPLIG-L-MDSFDKRIPTTIFATITLMSGILS-TFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~ 167 (200)
....++..++|.+. . .+..+|+..+++.++.+++..+.. .+.||++.
T Consensus 134 ~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 134 GITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 88888888888887 3 456678888888777776655543 44677643
No 14
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.96 E-value=1.6e-09 Score=95.73 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=88.3
Q ss_pred CCeeeEEEEEecccchhHHHHHhH---hhhhhhccccc------hHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHh
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWV---YDKTYYKTSRT------MEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRN 113 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~ 113 (200)
.|.++.+.+.||+|||+.+..+.. ..........+ ...+....++.+++.++.++....+.+|.+|++.|+
T Consensus 71 ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg 150 (502)
T TIGR00887 71 AGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRG 150 (502)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHH
Confidence 356677899999999976653322 11111111111 345667777888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--Hh-----------------------hcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 114 TGLGVGSMCARLSAALTPLIGL--MD-----------------------SFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~~--~~-----------------------~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
++.++.+....++..+++.+.. .. +++|+.++.+.++.+++..+..+++||++
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESp 228 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETP 228 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 9999998888787777776651 11 13588888777777777777777789973
No 15
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.95 E-value=6.7e-09 Score=87.74 Aligned_cols=123 Identities=20% Similarity=0.311 Sum_probs=89.0
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+........++.+++.+........+.+|.+|.+.|++..++.+
T Consensus 42 ~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (377)
T PRK11102 42 GQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVT 121 (377)
T ss_pred HHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 56778999999999977664433221 112223344445555666667777777788899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~ 166 (200)
....++..++|.+. +.+..+|+..+.+.+..+++..+.. ++.||++
T Consensus 122 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 122 LVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 98889999999887 3556788888888777777765544 4457653
No 16
>PRK03545 putative arabinose transporter; Provisional
Probab=98.94 E-value=7.5e-09 Score=88.33 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=87.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+++..+..... .......+.+++.+..++.++..+..++....+.+|.+|.+.|+++.|+..
T Consensus 60 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~ 139 (390)
T PRK03545 60 MSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLA 139 (390)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHH
Confidence 33455788999999987764433222 222224455566666666666666667778899999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet 165 (200)
....++..++|.+. +.+..+|+..+.+.++++++..+..+ ..||.
T Consensus 140 ~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 140 TGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88889999999888 35667899998888887776655443 35654
No 17
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.7e-08 Score=86.41 Aligned_cols=118 Identities=14% Similarity=0.095 Sum_probs=95.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++-..+.||+.||+++......... .....++...+...+++..+..+..++....+.+|+-|++.|++++++....
T Consensus 66 p~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G 145 (394)
T COG2814 66 PLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTG 145 (394)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHH
Confidence 4446778999999887754433322 2233677888899999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cc
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LP 163 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lp 163 (200)
..+...++.-+. +-+.++|+..|...+.++++..+..+. +|
T Consensus 146 ~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 146 LTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887777655555 467789999999999999998777655 68
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.93 E-value=2.8e-09 Score=91.12 Aligned_cols=123 Identities=17% Similarity=0.139 Sum_probs=87.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+....+..... .......+.+......++.++..+...+....+.+|.+|.+.|+++.++.+
T Consensus 66 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 145 (406)
T PRK11551 66 GALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMY 145 (406)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 55677899999999977664432221 112223455556666677777777778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHH-HhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGIL-STFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~-~~~lpet~ 166 (200)
....+++.++|.+. ..+..+|+..+++.+++.++..+. ..++||++
T Consensus 146 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 146 CGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 88888999988887 245566777777766655554443 34467753
No 19
>KOG0255|consensus
Probab=98.93 E-value=1.8e-08 Score=89.43 Aligned_cols=136 Identities=29% Similarity=0.381 Sum_probs=97.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh-----hhccccch-HHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT-----YYKTSRTM-EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
.........||+|||...+.+...... ........ ........++.++....+...+.+.+|++||.+|.++.+
T Consensus 366 ~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~ 445 (521)
T KOG0255|consen 366 AYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVG 445 (521)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 344445777899999766543322211 11111112 245667777788888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HhhcCchHHHHHHHHHHHHHHHHH-hhcccCCCCCchHHHHHHHh
Q psy10821 118 VGSMCARLSAALTPLIGL-MDSFDKRIPTTIFATITLMSGILS-TFLPETWNMVCDRRWMLAVA 179 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~~-~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~~~l~~~~~~~~~ 179 (200)
.....++++++++|++.. .........+.+++..+.+.+... .++|||+++.+.+..++.++
T Consensus 446 ~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~~ 509 (521)
T KOG0255|consen 446 AISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAEN 509 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHHh
Confidence 999999999999999994 444444444444566666655554 77899999999888777663
No 20
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.91 E-value=6.9e-09 Score=74.50 Aligned_cols=122 Identities=25% Similarity=0.270 Sum_probs=85.0
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+........... ......+........++.++..+...+....+..|.+|++.|+++.++..
T Consensus 14 ~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (141)
T TIGR00880 14 YSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMS 93 (141)
T ss_pred HHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHH
Confidence 345566778999999766543322211 11122344445555566667777778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet 165 (200)
....++..++|.+. ..+..++...+.+.+...++..+...+ .||+
T Consensus 94 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 94 AGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999888 345556767777777777766655554 4553
No 21
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.89 E-value=1e-08 Score=87.82 Aligned_cols=124 Identities=18% Similarity=0.097 Sum_probs=86.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+.+......++.++..+...+..+.+..|.+|.+.|.++.++..
T Consensus 64 ~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 143 (406)
T PRK15402 64 LQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMA 143 (406)
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 34567889999999987654332221 111123344445555566566666666777889999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet~~ 167 (200)
....++..++|.+. ..+..+|+..+++.++.++++.+..+ ..||+++
T Consensus 144 ~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 144 NVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 88888888888887 34556788888887777777665443 4687653
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.89 E-value=4.9e-09 Score=87.71 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=90.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+.... ........+.+......++.+++.+...+....+.+|.+|.+.|+++.++..
T Consensus 45 ~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 124 (399)
T TIGR00893 45 GQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFN 124 (399)
T ss_pred HHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4566788999999997655433221 1111223355566667777777888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~ 166 (200)
....++..++|.+. ..+..+|+..+.+.++..++..+..++ .||++
T Consensus 125 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 125 SAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 99899999998888 366778888888887777766555444 45544
No 23
>PRK09952 shikimate transporter; Provisional
Probab=98.88 E-value=6e-09 Score=90.68 Aligned_cols=120 Identities=15% Similarity=0.230 Sum_probs=80.8
Q ss_pred eEEEEEecccchhHHHHHhHhhhhh-----h-ccccchHHH-HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYDKTY-----Y-KTSRTMEYI-LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~~~~-----~-~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
..+++.||+|||+....+....... . ....+..+. ....++..+......+..+.+.+|.||++.|+++.++.
T Consensus 305 ~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~ 384 (438)
T PRK09952 305 CFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVG 384 (438)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHH
Confidence 3467899999997655332221110 1 112222222 22333444555666778899999999999999999999
Q ss_pred HHHHH-HHHHHHHHHH-H-Hhhc--CchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 120 SMCAR-LSAALTPLIG-L-MDSF--DKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 120 ~~~~~-i~~~~~p~i~-~-~~~~--~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
++++. +++.++|++. . .+.. ++..++.+.++.++++.+..+.++|++
T Consensus 385 ~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 385 YQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 99987 8999999998 3 3322 356677777778888877777777754
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.88 E-value=1.7e-08 Score=86.69 Aligned_cols=122 Identities=12% Similarity=0.041 Sum_probs=89.4
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
.+..+.+.||+|||+.+..+...... ......+.+......++.++..+...+....+.+|.+|.+.|+++.++...
T Consensus 72 ~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~ 151 (394)
T PRK10213 72 SLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFG 151 (394)
T ss_pred HHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHH
Confidence 34557888999999876644332222 112244566667777787888888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccCC
Q psy10821 122 CARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPETW 166 (200)
Q Consensus 122 ~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet~ 166 (200)
...++..++|.+. +.+..+|+..+.+.++++++..+... ..||.+
T Consensus 152 ~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 152 AVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 8889988989888 35567888888887766665544433 357754
No 25
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.87 E-value=2.3e-08 Score=86.85 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=85.1
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+...... ......+...+....++.++..+..++....+++|.||.+.|++++++.+
T Consensus 74 ~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~ 153 (434)
T PRK11663 74 SKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWN 153 (434)
T ss_pred HHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHH
Confidence 567789999999999766543332222 11123333444444555566666667778899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHH-HHhhcccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGI-LSTFLPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i-~~~~lpet 165 (200)
....+++.++|.+. ..+..+|+..+++.++.+++..+ ..+++||+
T Consensus 154 ~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 154 TAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999998877 45667888888887776665443 33345543
No 26
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.87 E-value=5.1e-09 Score=96.68 Aligned_cols=123 Identities=16% Similarity=0.220 Sum_probs=89.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.++.+.+.||+|||+.+..+.+.... ......+.+.+.+..++.+++.++..+..+.+++|.+|.+.|++..++..
T Consensus 218 G~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~ 297 (742)
T TIGR01299 218 GAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLC 297 (742)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 556678999999999776644332211 11123345566777888888888889999999999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhh-------------cCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDS-------------FDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~-------------~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
....+++.+++.+. +... .+|+..+++.++.+++..+..+++||++
T Consensus 298 ~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 298 MFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESP 358 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 88888888888765 2221 2456666666666666666677789984
No 27
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.87 E-value=1.9e-08 Score=86.93 Aligned_cols=124 Identities=16% Similarity=0.091 Sum_probs=89.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+...++...++.+++.+......+.+..|.||.+.|.+.+++..
T Consensus 67 ~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (413)
T PRK15403 67 LQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIIT 146 (413)
T ss_pred HHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45667899999999987664433221 222224455566666677666665555666788999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~ 167 (200)
....++..++|.+. +.+..+|+..|++.++..++..+.. +.+||+++
T Consensus 147 ~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 147 SIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99888888999887 3556688899988888777766553 45788754
No 28
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.85 E-value=2.8e-09 Score=91.63 Aligned_cols=127 Identities=19% Similarity=0.246 Sum_probs=85.0
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhc-----ccc------chHHHHHHHHHHHHHHhhhhhhHHHhhccccchh
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYK-----TSR------TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTV 110 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~-----~~~------~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~ 110 (200)
.++.+.+.||+|||+....+...... ... ... ...+.....++...+..+..+....+.+|.+|++
T Consensus 336 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 415 (481)
T TIGR00879 336 TFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS 415 (481)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH
Confidence 34457788999999765533221111 111 111 1112222333333334444566778889999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCCCCCch
Q psy10821 111 LRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPETWNMVCD 171 (200)
Q Consensus 111 vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~~~~l~ 171 (200)
.|+++.++......+++.++|.+. ..++.++...+.+.+++++++.++.++ .||+|+++.+
T Consensus 416 ~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 416 LRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 999999999999999999999888 356667778888888888887776654 6999887664
No 29
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.85 E-value=5e-09 Score=91.46 Aligned_cols=123 Identities=14% Similarity=0.047 Sum_probs=87.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhhhc---c---------ccc---hHHHHHHHHHHHHHHhhhhhhHHHhhccccc
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTYYK---T---------SRT---MEYILYIVFFGKFCIAGSFAVIYNYSAELFP 108 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~---~---------~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~sElfP 108 (200)
|.++.+.+.||+|||+++..+......... . ..+ ...+....++.+++.++..+....+++|.+|
T Consensus 71 ~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~ 150 (479)
T PRK10077 71 GGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAP 150 (479)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCC
Confidence 556678899999999776543222111100 0 111 2344667788888889999999999999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHH-H---------hhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 109 TVLRNTGLGVGSMCARLSAALTPLIGL-M---------DSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 109 t~vR~tg~~l~~~~~~i~~~~~p~i~~-~---------~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
.+.|++.+++......++..+++.+.. . ...+|+..+.+.++..++..+..+++||++
T Consensus 151 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~ 218 (479)
T PRK10077 151 AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETP 218 (479)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999987777777777766542 1 245788888887777777666666788875
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.84 E-value=2.5e-08 Score=84.98 Aligned_cols=123 Identities=11% Similarity=0.024 Sum_probs=87.1
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+++..+..... .......+.+.+....++.+++.+...+....+..|.+|.+.|++..++..
T Consensus 54 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (382)
T PRK10091 54 GAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMV 133 (382)
T ss_pred HHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHH
Confidence 45666888999999977664333222 222224456666666777777777667777888999999999999999888
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~ 166 (200)
....++..++|.+. ..+..+|+..+.+.++..++..+.. ..+||.+
T Consensus 134 ~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 134 SGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 77778888888776 3456788888888777766655443 4467754
No 31
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.84 E-value=1.3e-08 Score=86.27 Aligned_cols=123 Identities=15% Similarity=0.074 Sum_probs=86.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.++.+.+.||+|||+.+..+.... ........+...+....++.+++.+..++....+.+|.+|.+.|++..++..
T Consensus 63 ~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 142 (405)
T TIGR00891 63 GALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLI 142 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHH
Confidence 5567789999999997766433222 1122223445556666777777777888888999999999999999999998
Q ss_pred HHHHHHHHHHHHHH--HHhhcC--chHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFD--KRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~--~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
....++..++|.+. .....+ |+..+.+.++..++..+.....||++
T Consensus 143 ~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 143 SGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 88888988888887 233344 67777665555555544455568764
No 32
>KOG0255|consensus
Probab=98.83 E-value=2.2e-08 Score=88.90 Aligned_cols=121 Identities=17% Similarity=0.111 Sum_probs=95.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.++.+.+.||+|||+++..+...... ....+.+.+...+..++.+++.++...+.+.+.+|+++++.|+.+..+ .
T Consensus 134 G~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~ 212 (521)
T KOG0255|consen 134 GSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-G 212 (521)
T ss_pred HHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-H
Confidence 556678999999999887755443332 223367788889999999999999999999999999999999999999 8
Q ss_pred HHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
...+.++.+.|... ...+ +|+..+++..+...+..+..++.||++
T Consensus 213 ~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~~~l~~Es~ 258 (521)
T KOG0255|consen 213 GFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLLWFLPPESP 258 (521)
T ss_pred HHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHccCcCh
Confidence 88777777666666 4333 888888888888877777655556875
No 33
>PRK03699 putative transporter; Provisional
Probab=98.83 E-value=5.1e-09 Score=89.63 Aligned_cols=117 Identities=10% Similarity=0.063 Sum_probs=81.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.+..+.+.||+|||+.+..+...... ......+........++.+++.+...+....+++|.+|.+.|++..++.+
T Consensus 58 ~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 137 (394)
T PRK03699 58 SIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTD 137 (394)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHH
Confidence 456678899999999776544332211 11223344455556666666666667777889999999999999999888
Q ss_pred HHHHHHHHHHHHHH--HH-hhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 121 MCARLSAALTPLIG--LM-DSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~-~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
....+++.+.|.+. .. +..+|+..+.+.+++.++..+..+
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 138 SFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888876 23 346788888887777666555443
No 34
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=1.3e-08 Score=88.32 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=76.1
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhh---hhhccccchH--------HHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTME--------YILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
.|.++.+.+.||+|||+.+..+..... .......+.. .++...++.++..+..++....+++|.+|++.
T Consensus 71 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 150 (434)
T PRK15075 71 LGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR 150 (434)
T ss_pred hHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc
Confidence 355677899999999987664332221 1111222222 23455666666666677777899999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHH----------HhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIGL----------MDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
|++..++......++..+++.+.. ....+|+.++++......+........||+
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~ 214 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEET 214 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999987776655555444431 245778888876444332222222234664
No 35
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.82 E-value=9e-09 Score=90.81 Aligned_cols=124 Identities=16% Similarity=0.073 Sum_probs=86.0
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhhh---hhccccchH--------HHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTME--------YILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
.|.++.+.+.||+|||+++..+...... .....++.. .++...++.+++.++.++....+++|.+|.+.
T Consensus 72 ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~ 151 (490)
T PRK10642 72 LGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK 151 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC
Confidence 4677789999999999877654332222 112223322 25667778888888999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHH-H---------HhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIG-L---------MDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~-~---------~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
|++..++......+|..+++.+. . ..+++|+..|++.+..++++.++...+||+.
T Consensus 152 Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp 216 (490)
T PRK10642 152 RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETP 216 (490)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 99998887766556655555443 1 1257899998887666665555555678864
No 36
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.82 E-value=2.2e-08 Score=86.51 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=90.1
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+.... .......++...+....++.+++.+...+....+++|.||.+.|++..++..
T Consensus 59 ~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~ 138 (412)
T TIGR02332 59 CGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFM 138 (412)
T ss_pred HHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3455678899999997765433222 1222224556667777888888888888888889999999999999999998
Q ss_pred HHHHHHHHHHHHHH-HHh-------hcCchHHHHHHHHHHHHHHHH-HhhcccCCC
Q psy10821 121 MCARLSAALTPLIG-LMD-------SFDKRIPTTIFATITLMSGIL-STFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~~~-------~~~~~~~~~~~~~~~~~~~i~-~~~lpet~~ 167 (200)
....++..++|.+. ... ..+|+..+++.++.+++..++ .+++||+++
T Consensus 139 ~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 139 IAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 88888888888887 222 357888888887777665444 445688764
No 37
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.81 E-value=3.2e-08 Score=82.40 Aligned_cols=118 Identities=10% Similarity=-0.021 Sum_probs=84.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccc-----cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTS-----RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
+.+..+.+.||+|||+.+..+..... ...... .+.+......++.+++.+...+....+.+|.+|.+.|++.
T Consensus 50 ~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (365)
T TIGR00900 50 LSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQA 129 (365)
T ss_pred HHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 45677899999999977654322211 111111 1445556666666777777788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 116 LGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.++......++..++|.+. +.+..+|+..+.+.++..+++.+..+.
T Consensus 130 ~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 130 NSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999888 356678888887776666665544443
No 38
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.77 E-value=2e-08 Score=84.33 Aligned_cols=124 Identities=19% Similarity=0.128 Sum_probs=81.1
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhhh---hhccccchH--------HHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTME--------YILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
.|.++.+.+.||+|||+.+..+...... ......+.. ......++.++..+...+....+.+|.+|.+.
T Consensus 50 i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 129 (394)
T TIGR00883 50 LGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK 129 (394)
T ss_pred hHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc
Confidence 4667889999999999876644332221 111122211 23444455555666667778899999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHH-H---------hhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIGL-M---------DSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~~-~---------~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
|++..++......++..+++.+.. . ...+|+.++.+.++..+++.+.....||++
T Consensus 130 r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (394)
T TIGR00883 130 RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETP 194 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 999999988877788777777651 1 345677777776666655555444556653
No 39
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.77 E-value=1.2e-08 Score=88.41 Aligned_cols=124 Identities=12% Similarity=0.068 Sum_probs=72.4
Q ss_pred eeEEEEEecccchhHHHHHhHhh---hh-hh--ccccchHHH-HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYD---KT-YY--KTSRTMEYI-LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~---~~-~~--~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
++.+.+.||+|||+......... .. .. ....+..+. .....+..+......+..+.+.+|+||++.|+++.|+
T Consensus 297 ~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 297 PLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhH
Confidence 34578899999996554322111 11 11 111111222 2222222233333445677899999999999999999
Q ss_pred HHHHHH-HHHHHHHHHH-HHhhcC-chHHHHHHHHHHHHHHHHHhhcccCCCCCc
Q psy10821 119 GSMCAR-LSAALTPLIG-LMDSFD-KRIPTTIFATITLMSGILSTFLPETWNMVC 170 (200)
Q Consensus 119 ~~~~~~-i~~~~~p~i~-~~~~~~-~~~~~~~~~~~~~~~~i~~~~lpet~~~~l 170 (200)
.+++++ +++...|++. .++..+ +...+++.++.++++.+..++ .++++|++
T Consensus 377 ~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~-l~~~~~~~ 430 (432)
T PRK10406 377 SYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM-LHRKGKGM 430 (432)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-hhhccccc
Confidence 999988 4566788877 455455 334555555666666665555 44455554
No 40
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.76 E-value=1.8e-08 Score=86.63 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=88.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hhhhcc---ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KTYYKT---SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
+.+..+.+.||+|||+.+..+.... ...... ..+.+.++...++.+++.+........+.+|.+|.+.|+++.+
T Consensus 87 ~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 166 (481)
T TIGR00879 87 GALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTS 166 (481)
T ss_pred HHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhh
Confidence 4567789999999997765432211 111111 1222356667777777788888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HH--hhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 118 VGSMCARLSAALTPLIG---LM--DSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~---~~--~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
+......++..++|.+. .. ...+|+..+.+.+...++..+..+++||++
T Consensus 167 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 167 LYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESP 220 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 98888889999988887 32 456788888886666666666666678764
No 41
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.76 E-value=2.4e-08 Score=85.24 Aligned_cols=122 Identities=12% Similarity=0.019 Sum_probs=86.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhhh---ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTYY---KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||++............ ....+..++....++.++.... ........+|.+|.+.|+++.++..
T Consensus 42 ~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~ 120 (368)
T TIGR00903 42 LTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLS 120 (368)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 34556899999999976653332221111 1123556677777777766654 4455566699999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHH-HhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGIL-STFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~-~~~lpet~ 166 (200)
....++..++|.+. +.+..+|+..+++.++++++..+. .+++||.+
T Consensus 121 ~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 121 FAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 98889999998887 356788999988888877776554 44568764
No 42
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.75 E-value=1.5e-08 Score=87.86 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=83.8
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhh---hhhhccccch--------HHHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTM--------EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
.|.++.+.+.||+|||+.+..+.... ........+. ..++..+++.+++.++.++....+++|.+|.+.
T Consensus 78 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~ 157 (432)
T PRK10406 78 IGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR 157 (432)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc
Confidence 45667788999999998766433222 1111111221 235667778888888889999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHH-H---------HhhcCchHHHHHHHHHHHHHHHHHhhcccCCC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIG-L---------MDSFDKRIPTTIFATITLMSGILSTFLPETWN 167 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~-~---------~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~ 167 (200)
|++..++.+.....+..+++.+. . ...++|+.+|++.++.+++.......+||++.
T Consensus 158 rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~ 223 (432)
T PRK10406 158 KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQ 223 (432)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 99988876555445555555443 1 12578999998877777666554445677643
No 43
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.73 E-value=2.5e-08 Score=87.85 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=74.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.++.+.+.||+|||+.+..+.+..... .....+...+....++.+++.+.. .....+++|.||.+.|+++.++..
T Consensus 87 ~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~ 165 (476)
T PLN00028 87 SRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAA 165 (476)
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHH
Confidence 4456678889999997665433222111 112333444444455555554443 334567899999999999999998
Q ss_pred HHHHHHHHHHHHHH-----HHhh------cCchHHHHHHHHHHHHHHHHHhhcc
Q psy10821 121 MCARLSAALTPLIG-----LMDS------FDKRIPTTIFATITLMSGILSTFLP 163 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-----~~~~------~~~~~~~~~~~~~~~~~~i~~~~lp 163 (200)
..+.+++.+++.+. .... .+|+..+++.++++++..+..++++
T Consensus 166 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 166 GWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 77666666555444 1111 3688888888888777666555543
No 44
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.71 E-value=2.9e-08 Score=82.93 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=76.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+...... ......+.+.......+.+++.+..+.....+..|.+| +.|++..++..
T Consensus 54 ~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 132 (377)
T TIGR00890 54 SMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIII 132 (377)
T ss_pred HhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHH
Confidence 567788999999999776543332221 11123344444555556666666666677778888888 56999999887
Q ss_pred HHHHHHHHHH-HHHH-HHhhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 121 MCARLSAALT-PLIG-LMDSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 121 ~~~~i~~~~~-p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
....++..+. |... ..+..+|+..+.+.++.+++..+..+
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 133 GGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7777776654 4444 35566788888888887777655443
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.70 E-value=5.6e-08 Score=84.78 Aligned_cols=124 Identities=12% Similarity=0.175 Sum_probs=90.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+...++...++.+++.+...+....++.|.+|.+.|+++.++..
T Consensus 53 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 132 (485)
T TIGR00711 53 SIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWG 132 (485)
T ss_pred HHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 44667889999999977664332221 222224455666677777777778888889999999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet~~ 167 (200)
....++..++|.+. +.+..+|+..+++.+.++++..+... ..||.+.
T Consensus 133 ~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 133 LTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 88889999999887 35667888888887777766655544 3566543
No 46
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.68 E-value=1.1e-07 Score=81.78 Aligned_cols=123 Identities=12% Similarity=0.084 Sum_probs=82.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh-----h---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK-----T---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
+.+..+.+.||+|||+.+..+..... . ......+..++....++.+++.+...+....+.+|.+|.+.|+++
T Consensus 68 ~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (417)
T PRK10489 68 GLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQA 147 (417)
T ss_pred HHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHH
Confidence 45677899999999965442211110 0 111122334444455555555555666778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 116 LGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
.++......++..++|.+. +.+..++.+.+.+.++..++..+..+.+||++
T Consensus 148 ~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 200 (417)
T PRK10489 148 GAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALP 200 (417)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998888889999999888 35556777777776666666666666677653
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.67 E-value=4.3e-08 Score=85.61 Aligned_cols=119 Identities=9% Similarity=0.023 Sum_probs=87.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hh--ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YY--KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
+.+.++.+.||+|||+.+..+...... .. ....+....+...++.+++.+..++....+.+|.+|.+.|++..++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 456678899999999766543322211 11 1122334566677777888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhh-cCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 119 GSMCARLSAALTPLIG--LMDS-FDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~-~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
......++..++|.+. +... .+|+..+++.++.+++..+..++.
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 9998899999988887 3455 388889988888777766655543
No 48
>PRK10054 putative transporter; Provisional
Probab=98.66 E-value=1.2e-07 Score=81.53 Aligned_cols=123 Identities=8% Similarity=0.045 Sum_probs=82.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+...... ......+.+.......+.........+....+.+|.+|.+.|+++.++.+
T Consensus 59 ~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (395)
T PRK10054 59 FSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNY 138 (395)
T ss_pred HHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Confidence 346678999999999766543322211 11122233333333333344444556667888999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCC
Q psy10821 121 MCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILS-TFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~ 166 (200)
....++..++|.+. .+...+++..+.+.+++.++..+.. +++||++
T Consensus 139 ~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 139 TMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999888 4445678888888777777765544 3356553
No 49
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.65 E-value=1.7e-08 Score=86.53 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=89.8
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhhh---ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTYY---KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.||.+.|..+..+++.+.... ..+.+...+.+...+-+.+++..++++.-.++-.||.+.|++..|+=+..
T Consensus 82 f~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~s 161 (448)
T COG2271 82 FVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTS 161 (448)
T ss_pred HHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhh
Confidence 566899999999976665555444322 23444455566666778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH----HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 123 ARLSAALTPLIG----LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 123 ~~i~~~~~p~i~----~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.++||.+.|.+. ...+.+|+..|++-++++++..++.++
T Consensus 162 hNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 162 HNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred hhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 999888877776 245568889999988888886666555
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.64 E-value=2.9e-07 Score=79.20 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=84.6
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
.+..+.+.||+|||+.+..+...... ......+.+++....++.++..+...+....++.|.+|.+.|+++.|+...
T Consensus 63 ~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 142 (400)
T PRK11646 63 GIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMM 142 (400)
T ss_pred HhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 35678999999999776643332221 112233444555555555666556667778889999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHH-HhhcccC
Q psy10821 122 CARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGIL-STFLPET 165 (200)
Q Consensus 122 ~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~-~~~lpet 165 (200)
...++..++|.+. .+...+++..+++.+...++..+. ..+.||.
T Consensus 143 ~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 143 QDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999888 444677888888777766665444 3445664
No 51
>TIGR00895 2A0115 benzoate transport.
Probab=98.64 E-value=3.7e-08 Score=82.98 Aligned_cols=123 Identities=19% Similarity=0.220 Sum_probs=86.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.++.+.+.||+|||+.+..+..... .......+.+......++.+++.+...+....+.+|.+|.+.|+++.++..
T Consensus 68 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 147 (398)
T TIGR00895 68 GALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMF 147 (398)
T ss_pred HHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHh
Confidence 55677899999999977654332221 111223344455555666667777778889999999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHH-HHhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGI-LSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i-~~~~lpet~ 166 (200)
....++..++|.+. +.+..+++..+.+.++...+..+ ...++||+.
T Consensus 148 ~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 148 CGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 88889999999887 35566777777777655554443 444567653
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.63 E-value=2.8e-07 Score=78.56 Aligned_cols=121 Identities=19% Similarity=0.071 Sum_probs=79.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.++.+.+.||+|||+.+..+...... ......+.+......++.++.. +..+....+..|.+|.+.|++..++..
T Consensus 70 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (408)
T PRK09874 70 ASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLS 148 (408)
T ss_pred HHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 345567899999999776543322211 1112333444444555554443 345566678889999999999999998
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh-hcccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST-FLPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~lpet 165 (200)
....++..++|.+. +.+..+++..+.+.++..++..+... +.||.
T Consensus 149 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 149 TGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88888888888888 34567788888877777666555443 34553
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.63 E-value=3.1e-08 Score=81.72 Aligned_cols=157 Identities=22% Similarity=0.209 Sum_probs=102.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+....+...... ......+........++.++..+...+....+.+|.+|.+.|++..++..
T Consensus 50 ~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (352)
T cd06174 50 GSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFS 129 (352)
T ss_pred HHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHH
Confidence 456678899999999766543332221 11123444555666666677777778889999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcc-cC------------------------CCCC-chH
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLP-ET------------------------WNMV-CDR 172 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lp-et------------------------~~~~-l~~ 172 (200)
....++..++|.+. ..+..+++..+.+.++..++..+...+.+ .. ..+. -.+
T Consensus 130 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd06174 130 AGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLS 209 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999888 35555677777666665555444333222 00 0000 001
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhccccCC
Q psy10821 173 RWMLAVAQMTYMFGVFTGAVTLGSLADK 200 (200)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~g~~~d~ 200 (200)
..+.........++..++..+.|+++||
T Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 237 (352)
T cd06174 210 AAEAGLLLSLFGLGGILGALLGGLLSDR 237 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112233456677888888888888876
No 54
>PRK09952 shikimate transporter; Provisional
Probab=98.63 E-value=5.1e-08 Score=84.86 Aligned_cols=123 Identities=13% Similarity=0.048 Sum_probs=81.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hhhhccccchH--------HHHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTME--------YILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
|.++.+.+.||+|||+.+..+.... .......++.. .++..+++.++..++.++....+.+|.+|.+.|
T Consensus 80 g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~r 159 (438)
T PRK09952 80 GGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKK 159 (438)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCC
Confidence 4555688999999998766433222 21112222322 255567777888888888889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH---------hhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG-LM---------DSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~-~~---------~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
++..+.......++..+++.+. .+ ..++|+.++++.++..++........||++
T Consensus 160 g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~ 223 (438)
T PRK09952 160 AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESA 223 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 9888877666556666665443 11 246888888887766555444334457764
No 55
>KOG0569|consensus
Probab=98.62 E-value=6.7e-08 Score=85.02 Aligned_cols=124 Identities=19% Similarity=0.154 Sum_probs=92.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---h---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---Y---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
|.+.++.+.||+|||..+....++... . .........++...++.+...+...+..+.|..|+-|.+.|+....
T Consensus 76 Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~ 155 (485)
T KOG0569|consen 76 GSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGT 155 (485)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHH
Confidence 667778999999999554432222211 1 1123456677888999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHH---H-hhcCchHHHHHHHHHHHHHHHHHhhcccCCC
Q psy10821 118 VGSMCARLSAALTPLIGL---M-DSFDKRIPTTIFATITLMSGILSTFLPETWN 167 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~~---~-~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~ 167 (200)
+......++-.++..+.+ + .+..|++.+....+.+++..+...++||+.+
T Consensus 156 ~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 156 LLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred HHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 887777777777766652 3 3444777777778888888888889999853
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.62 E-value=2.1e-07 Score=78.04 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=58.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hcccc-chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSR-TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+.+..+.+.||+|||+.+..+....... ..... +.+......++.++.. +.+.....+++|.+|.+.|++..++.
T Consensus 53 ~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~ 131 (366)
T TIGR00886 53 LRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLA 131 (366)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHH
Confidence 4567789999999997665433322221 11223 4444455555555543 34556678999999999999999998
Q ss_pred HHHHHHHHHHHHHHH
Q psy10821 120 SMCARLSAALTPLIG 134 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~ 134 (200)
.....++..+++.+.
T Consensus 132 ~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 132 AGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHhHHHHHHHHHHH
Confidence 876666665555554
No 57
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.61 E-value=6.2e-08 Score=83.34 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=83.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.+..+.+.||+|||+.+..+...... ......+........++.+++.+..++....+.+|.+|.+.|+++.++..
T Consensus 69 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 148 (426)
T PRK12307 69 GGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLV 148 (426)
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHH
Confidence 456678899999999877644332222 11223445556666777777778888888999999999999999999988
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
....++..++|.+. +.+..+|+..+++.....++........||++
T Consensus 149 ~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~ 196 (426)
T PRK12307 149 SGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESK 196 (426)
T ss_pred HHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCCh
Confidence 87778888888776 34556788877764433333222222346653
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.60 E-value=2.7e-07 Score=79.21 Aligned_cols=120 Identities=13% Similarity=0.033 Sum_probs=80.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
..++.+.+.||+|||+++..+..... .......+ .....++.+++.+...+....+++|++|.+.|+++.|+..
T Consensus 54 ~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~ 130 (393)
T PRK11195 54 LAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWME 130 (393)
T ss_pred HHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 45778899999999987654332211 11111111 1445566677788888889999999999999999999998
Q ss_pred HHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
....++..++|.+. .+.+..+...+.+.+...+++.+....+||.+
T Consensus 131 ~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 131 GSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 88888889999988 33333344445444444444444455567654
No 59
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.60 E-value=1.3e-07 Score=81.12 Aligned_cols=112 Identities=11% Similarity=-0.005 Sum_probs=77.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+++..+...... .....++...++...++.+++.+........++.|.|| +.|++..++..
T Consensus 60 ~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~ 138 (393)
T PRK09705 60 LALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWS 138 (393)
T ss_pred HhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHH
Confidence 456678889999999887754433322 22234556666777888888888888888889999998 77999999988
Q ss_pred HHHHHHHHHHHHHH-H-Hhh-cCchHHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG-L-MDS-FDKRIPTTIFATITLMSG 156 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~-~~~-~~~~~~~~~~~~~~~~~~ 156 (200)
....+++.+++.+. . .+. .+|+..+.++++..++..
T Consensus 139 ~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 139 AALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 77777777777766 2 333 256666655555444433
No 60
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.60 E-value=2.7e-08 Score=83.20 Aligned_cols=123 Identities=9% Similarity=0.075 Sum_probs=85.9
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
.+.+..+.+.||+|||+.+..+..... .......+.+......++.+++.+...+....+.+|.+|.+.|++..++.
T Consensus 45 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 124 (379)
T TIGR00881 45 ISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFW 124 (379)
T ss_pred hhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeeh
Confidence 356778999999999976654433221 11122334455566666667777777888899999999999999999999
Q ss_pred HHHHHHHHHHHHH-HH--HHhhcCchHHHHHHHHHHHHHHHH-HhhcccC
Q psy10821 120 SMCARLSAALTPL-IG--LMDSFDKRIPTTIFATITLMSGIL-STFLPET 165 (200)
Q Consensus 120 ~~~~~i~~~~~p~-i~--~~~~~~~~~~~~~~~~~~~~~~i~-~~~lpet 165 (200)
.....+++.++|. +. .....+|+..+.+.+++.++..+. ..+.||+
T Consensus 125 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 125 NCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred hccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 8888899998884 44 345567888877777666665444 3344554
No 61
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.60 E-value=4.1e-07 Score=80.43 Aligned_cols=123 Identities=19% Similarity=0.096 Sum_probs=88.3
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhcccc-chhHHhHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELF-PTVLRNTGLGVGS 120 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElf-Pt~vR~tg~~l~~ 120 (200)
.+..+.+.||+|||+.+..+...... ......+.+.++....+.+++.+...+.....+.+.+ |.+.|+++.|+..
T Consensus 58 ~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~ 137 (495)
T PRK14995 58 VLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWA 137 (495)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35568899999999877654432222 2222455666666777777777776666666666665 7899999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~ 167 (200)
....++..++|.+. +.+..+|++.|++...++++..+.. .++||.++
T Consensus 138 ~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 138 AVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999998 4567789998888777777665544 34576543
No 62
>PRK11043 putative transporter; Provisional
Probab=98.60 E-value=4.4e-07 Score=77.60 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=84.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+...... ......+.+......++.+++..........+.+|.+|.+.|.+..+...
T Consensus 57 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (401)
T PRK11043 57 GQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIM 136 (401)
T ss_pred HHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 567789999999999876644332221 11223344445555555555555555556678899999999999888888
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
....+++.++|.+. ..+..+|+..+++.++..++..+..++.+|.
T Consensus 137 ~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 137 PLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 87778888888887 3566788888888877777766666555543
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.59 E-value=1.9e-07 Score=81.16 Aligned_cols=122 Identities=10% Similarity=0.123 Sum_probs=80.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hcc----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKT----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
+.+..+.+.||+|||+....+....... ... ..+........++.+++.+..++....+..|.+|.+.|+++.
T Consensus 77 ~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~ 156 (438)
T TIGR00712 77 SKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIV 156 (438)
T ss_pred hhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHH
Confidence 5677899999999997655332221111 111 112222334445556666666777788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHh-hcCchHHHHHHHHHHHHHHHH-HhhcccC
Q psy10821 117 GVGSMCARLSAALTPLIG--LMD-SFDKRIPTTIFATITLMSGIL-STFLPET 165 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~--~~~-~~~~~~~~~~~~~~~~~~~i~-~~~lpet 165 (200)
++.+....+++.++|.+. ... ..+|+..+++.++.+++..+. .+++||+
T Consensus 157 ~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 157 SIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 998888888888877665 233 357888888888777775544 4445654
No 64
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.58 E-value=9.9e-08 Score=83.72 Aligned_cols=123 Identities=17% Similarity=0.091 Sum_probs=84.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+.+.+....++.+++.++.++....++.|.+|.+.|+++.++..
T Consensus 71 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 150 (496)
T PRK03893 71 GGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLI 150 (496)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 34566889999999986654332221 111223445556666777777778888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
....++..++|.+. ..+..+|+..+.+.+...++..+.....||.+
T Consensus 151 ~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~ 198 (496)
T PRK03893 151 SGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAE 198 (496)
T ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 88889999999888 35566777776654433333333334456653
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.57 E-value=6.4e-07 Score=86.19 Aligned_cols=91 Identities=9% Similarity=-0.089 Sum_probs=67.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh----hhh--hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD----KTY--YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
+.+.++.+.||+|||+++..+.... ... .....+.+.+.+..++.+++.+...+....+++|++|.+.|+++.|
T Consensus 63 ~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 142 (1146)
T PRK08633 63 LSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANG 142 (1146)
T ss_pred HhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhh
Confidence 5567899999999998765432211 111 1112334455666666777777788888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10821 118 VGSMCARLSAALTPLIG 134 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~ 134 (200)
+......++..++|.+.
T Consensus 143 ~~~~~~~ig~~lg~~l~ 159 (1146)
T PRK08633 143 LLEAFTIVAILAGTALF 159 (1146)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988887
No 66
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.57 E-value=3.3e-07 Score=79.98 Aligned_cols=122 Identities=8% Similarity=0.048 Sum_probs=78.1
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhcc----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKT----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
+.+..+.+.||+|||+++..+..... ..... ..+........++.+++.+..++.....+.|.+|.+.|+++.
T Consensus 79 ~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~ 158 (452)
T PRK11273 79 SKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIV 158 (452)
T ss_pred HHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHH
Confidence 55778999999999976654332211 11111 123334455555666666666676777889999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHH--HHhhcCchHHHHHHHHHHHHHHH-HHhhcccC
Q psy10821 117 GVGSMCARLSAA-LTPLIG--LMDSFDKRIPTTIFATITLMSGI-LSTFLPET 165 (200)
Q Consensus 117 ~l~~~~~~i~~~-~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i-~~~~lpet 165 (200)
++......+++. ..|.+. .....+|+..+++.++++++..+ ..+++||+
T Consensus 159 ~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 159 SVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 997776667764 455543 22334777788877776666544 44455664
No 67
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.56 E-value=2.4e-07 Score=79.08 Aligned_cols=127 Identities=13% Similarity=0.027 Sum_probs=85.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+.+.||+|||+....+...... ......+........++.+++.+..++.......|.+|.+.|+++.++....
T Consensus 267 ~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 267 LLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4456778999998765533222111 1111223333344444555566666666677788999999999999999888
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCCCCCchH
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETWNMVCDR 172 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~l~~ 172 (200)
..+++.++|.+. ..+..++...+.+.+++.+++.+...++++.++|+.+|
T Consensus 347 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T PRK05122 347 LDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Confidence 888888777776 45667778888888888888777777777666655443
No 68
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.55 E-value=2.3e-07 Score=76.91 Aligned_cols=115 Identities=19% Similarity=0.156 Sum_probs=87.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+....... .....+.+......++.+++.+...+....+++|.+|.+.|++..++..
T Consensus 48 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 127 (352)
T PF07690_consen 48 FSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILS 127 (352)
T ss_dssp HHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhcccccc
Confidence 3456688899999998665443322221 1112344466777777888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG-L-MDSFDKRIPTTIFATITLMSGIL 158 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i~ 158 (200)
....++..++|.+. . .+..+|+..+++.+++.++..++
T Consensus 128 ~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 128 AGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred chhhhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999999998 3 45667888888888888887764
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.54 E-value=4.3e-07 Score=87.67 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=86.3
Q ss_pred CeeeEEEEEecccchhHHH----HHhHhhh--hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTC----HSWVYDK--TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
..++++.+.||+|||+++. ....... .......+.+.+++..++.+++.+...+....++.|++|.+.|.+++|
T Consensus 68 ~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~ 147 (1140)
T PRK06814 68 FSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANA 147 (1140)
T ss_pred HhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhH
Confidence 4466799999999997532 1111111 111112455666777777788888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 118 VGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
+......++..++|.+. +....+|...+....+..+++.++.+++|+++
T Consensus 148 ~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 148 LVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999998 34556666666444444445555556666543
No 70
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.52 E-value=3.3e-07 Score=78.92 Aligned_cols=131 Identities=11% Similarity=-0.077 Sum_probs=83.9
Q ss_pred eEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA 123 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~ 123 (200)
+.+++.||.++++.+..+.... ........+........++.+++..........+..|..|.+.|+++.|+.+...
T Consensus 278 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 357 (417)
T PRK10489 278 TSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQN 357 (417)
T ss_pred HHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3456677766654433222211 1111122333233333444444444455566788999999999999999999988
Q ss_pred HHHHHHHHHHH--HHhhcCchHHHHHHHHHHHH-HHHHHhhcccCCCCCchHHHHHH
Q psy10821 124 RLSAALTPLIG--LMDSFDKRIPTTIFATITLM-SGILSTFLPETWNMVCDRRWMLA 177 (200)
Q Consensus 124 ~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~-~~i~~~~lpet~~~~l~~~~~~~ 177 (200)
.+++.++|.+. +.+..+....+...++..++ +.+....+||+|+++.+|..+|.
T Consensus 358 ~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 358 VTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred hhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 89999999998 35566766666666655555 44555667999999988876654
No 71
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.50 E-value=1.5e-07 Score=83.31 Aligned_cols=116 Identities=8% Similarity=0.011 Sum_probs=75.3
Q ss_pred CeeeEEEEEecc-cchhHHHHHhHhhhhhh-c--ccc-chHHHHHHHHHHHHHHhhhhhhHHHhhccccchh--HHhHHH
Q psy10821 44 GKFESCRMFDAF-TNKTMTCHSWVYDKTYY-K--TSR-TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTV--LRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~-GRr~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~--vR~tg~ 116 (200)
+.++++++.||+ |||+....+........ . ... ..........+..++.+...+....+++|+||++ .|.++.
T Consensus 61 ~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf 140 (493)
T PRK15462 61 TPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGF 140 (493)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcccccee
Confidence 345678999999 99987664433222111 1 111 1122222222222333444456678999999986 799999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH
Q psy10821 117 GVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS 159 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (200)
++.|+.+++++.++|.+. +.++.+|+..|...++..+++.+..
T Consensus 141 ~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 141 SLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 3567788888887665555544443
No 72
>KOG0254|consensus
Probab=98.50 E-value=1.9e-07 Score=83.05 Aligned_cols=124 Identities=16% Similarity=0.155 Sum_probs=92.6
Q ss_pred CeeeEEEEEecccchhHHHHHhH-hhh--hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV-YDK--TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.+.++.+.|++|||..+..+.+ +.. .......+..++.+.+++.+++.++...+.+.|.+|+-|++.|+.-.+...
T Consensus 105 g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~ 184 (513)
T KOG0254|consen 105 GSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQ 184 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHH
Confidence 56777889999999966553322 222 222234577888999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHH-Hhh--cCchHHHHHHHHHHHHHHHHHhhcccCCC
Q psy10821 121 MCARLSAALTPLIGL-MDS--FDKRIPTTIFATITLMSGILSTFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~~-~~~--~~~~~~~~~~~~~~~~~~i~~~~lpet~~ 167 (200)
....++..++-.+.. ..+ .+|+.++....+.+++..+..++.||+.+
T Consensus 185 l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~ 234 (513)
T KOG0254|consen 185 LFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPR 234 (513)
T ss_pred HHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 887766555522223 222 37888888888888888777777898753
No 73
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.49 E-value=1.4e-06 Score=74.32 Aligned_cols=124 Identities=12% Similarity=0.076 Sum_probs=83.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... .......+...+....++.+++.+........+..|.+|.+.|++..++..
T Consensus 59 ~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (394)
T PRK11652 59 SQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLN 138 (394)
T ss_pred HHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45678999999999987654332221 111223344555555666666555555666778899999999999988877
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHH-HHhhcccCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGI-LSTFLPETWN 167 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i-~~~~lpet~~ 167 (200)
....++..++|.+. +.+..+|+..+.+.++..++..+ ..++.||++.
T Consensus 139 ~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 139 MGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 66668888888887 34556788888887766655444 3445687643
No 74
>PRK12382 putative transporter; Provisional
Probab=98.49 E-value=1.3e-06 Score=74.45 Aligned_cols=108 Identities=10% Similarity=0.013 Sum_probs=70.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hh----cc----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YY----KT----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~----~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
+.+..+.+.||+|||+.+..+...... .. .. ..+...+....++.+++.+...+....+..|.+|.+.|
T Consensus 67 ~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 146 (392)
T PRK12382 67 TRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHS 146 (392)
T ss_pred HhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc
Confidence 456779999999999876643222111 10 00 12334455556666666666666677888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-H-HhhcCchHHHHHHHHH
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG-L-MDSFDKRIPTTIFATI 151 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~ 151 (200)
+++.++......++..++|.+. . .+..++...+.+..+.
T Consensus 147 ~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 147 GKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 9999998766667888888887 3 4556666554444333
No 75
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.47 E-value=1.3e-06 Score=74.64 Aligned_cols=121 Identities=9% Similarity=-0.025 Sum_probs=78.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhh-c--ccc-----chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYY-K--TSR-----TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~-~--~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
+.+..+.+.||+|||+++..+..... ... . ... +...++...++.+++.+........+..|.+|.+.|
T Consensus 67 ~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r 146 (399)
T PRK05122 67 SRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHT 146 (399)
T ss_pred hchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhh
Confidence 45678999999999987664432211 111 1 111 122345556666677777777778888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhccc
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPE 164 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpe 164 (200)
+++.++......++..++|.+. +.+..++...+.+.++..++..+.....|+
T Consensus 147 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 200 (399)
T PRK05122 147 GRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPA 200 (399)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999987766667777778876 356677777666655554444333333344
No 76
>PRK10504 putative transporter; Provisional
Probab=98.47 E-value=9.8e-07 Score=77.07 Aligned_cols=122 Identities=13% Similarity=0.075 Sum_probs=88.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+....+..... .......+.+......++.+++.+...+....+..|.+|.+.|+++.++..
T Consensus 61 ~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (471)
T PRK10504 61 MLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 45677889999999976654322211 111223445556666777777777778888899999999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPET 165 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet 165 (200)
....++..++|.+. ..+..+|+..+.+....+.+..+.... .|+.
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 88889999998888 356678888888877766666555444 3544
No 77
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.46 E-value=2.8e-06 Score=75.24 Aligned_cols=123 Identities=14% Similarity=0.173 Sum_probs=85.6
Q ss_pred CeeeEEEEEecc-----cchhHHH-HHhH---hhhh--hhcc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 44 GKFESCRMFDAF-----TNKTMTC-HSWV---YDKT--YYKT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 44 G~~~~~~l~Dr~-----GRr~~~~-~~~~---~~~~--~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
+.++.+.+.||+ |||+..+ .+.. .... .... ..+..+.....++..++.+........+.+|.+|.+.
T Consensus 61 ~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~ 140 (491)
T PRK11010 61 FKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE 140 (491)
T ss_pred HHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 345567888999 9986422 2111 1111 1111 2234455556666667777777788899999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHH-H-Hh-hcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIG-L-MD-SFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~-~-~~-~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
|+++.++......++..+++.+. . .+ ..+|+..+++.++..++..+..++.||++
T Consensus 141 rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~ 198 (491)
T PRK11010 141 RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPT 198 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999988888888888777 3 34 35899999998888777766666677763
No 78
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.46 E-value=1.8e-06 Score=72.63 Aligned_cols=122 Identities=12% Similarity=0.033 Sum_probs=74.9
Q ss_pred eeeEEEEEecccchhHHH-HHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH--HHH
Q psy10821 45 KFESCRMFDAFTNKTMTC-HSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG--LGV 118 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg--~~l 118 (200)
.+..+.+.||+|||+.+. .+..... .......+.+.+.....+.....+...+....+..|..|.+.|..+ .+.
T Consensus 50 ~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 129 (375)
T TIGR00899 50 SQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSV 129 (375)
T ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHH
Confidence 345578899999886433 2222211 1112233333344444444444444555666778898888877755 466
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCC
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPETW 166 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~ 166 (200)
......++..++|.+. +.+..+|+..+++.+...++..+..++ +||.+
T Consensus 130 ~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 130 MRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6666668888888877 345678888998888877776655444 67654
No 79
>KOG1330|consensus
Probab=98.46 E-value=3.4e-09 Score=91.55 Aligned_cols=120 Identities=18% Similarity=0.125 Sum_probs=91.4
Q ss_pred eeeEEEEEecccchhHHHH---HhHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCH---SWVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
+++++++.||+.||.+++. .|....+....+.+.+.++....+.+++.+.+.+..+.+++++||-..|+++.++.|.
T Consensus 85 sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~ 164 (493)
T KOG1330|consen 85 SPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYF 164 (493)
T ss_pred HHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhh
Confidence 3667899999999987763 3544444444455566678889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-H-H-hhcCchHHHHHHHHHHHHHHHHHhh-ccc
Q psy10821 122 CARLSAALTPLIG-L-M-DSFDKRIPTTIFATITLMSGILSTF-LPE 164 (200)
Q Consensus 122 ~~~i~~~~~p~i~-~-~-~~~~~~~~~~~~~~~~~~~~i~~~~-lpe 164 (200)
...+|++++-.+. . . ....|++.+...++++++.+++.++ .+|
T Consensus 165 ~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 165 AIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9888777665554 2 2 2223888888888888887766554 443
No 80
>PRK15075 citrate-proton symporter; Provisional
Probab=98.39 E-value=5.6e-07 Score=78.09 Aligned_cols=129 Identities=12% Similarity=0.098 Sum_probs=74.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh----h--hc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT----Y--YK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~----~--~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
|.++.+++.||+|||+....+...... . .. .............+..++.+...+..+.+.+|.+|.+.|+++.
T Consensus 290 ~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~ 369 (434)
T PRK15075 290 WLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGF 369 (434)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhe
Confidence 344567889999999765432211110 0 11 1112222222223333444555566778899999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHH--HHhhcCchH-HHHHHHHHHHHHHHHHhhcccCCCCCchH
Q psy10821 117 GVGSMCARL-SAALTPLIG--LMDSFDKRI-PTTIFATITLMSGILSTFLPETWNMVCDR 172 (200)
Q Consensus 117 ~l~~~~~~i-~~~~~p~i~--~~~~~~~~~-~~~~~~~~~~~~~i~~~~lpet~~~~l~~ 172 (200)
++.++++.. ++.++|.+. ..+..+..+ ..++.....++..+..+.+++.++.+++.
T Consensus 370 g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK15075 370 SLAYSLATAIFGGFTPAISTWLIHVTGDKAAPGYWLSFAAVCGLIATLVLYRRRGARLQA 429 (434)
T ss_pred eHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHhccccchhhhh
Confidence 999998884 588888888 345555422 22222223334444555567766666643
No 81
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.37 E-value=2e-06 Score=76.27 Aligned_cols=111 Identities=8% Similarity=-0.080 Sum_probs=71.4
Q ss_pred eeEEEEEec-ccchhHHHHHhHhhhhh---hccccchHH-HHHHHHHHHHHHhhhhhhHHHhhccccchhH--HhHHHHH
Q psy10821 46 FESCRMFDA-FTNKTMTCHSWVYDKTY---YKTSRTMEY-ILYIVFFGKFCIAGSFAVIYNYSAELFPTVL--RNTGLGV 118 (200)
Q Consensus 46 ~~~~~l~Dr-~GRr~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v--R~tg~~l 118 (200)
++++++.|| +|||+....+....... .....+... +.....+..++.+...+....+++|.||.+. |.++.++
T Consensus 68 ~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~ 147 (489)
T PRK10207 68 SIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTL 147 (489)
T ss_pred hhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhH
Confidence 467899999 99998776543322221 111222222 2234444556666677778899999999885 4677888
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHH
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSG 156 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~ 156 (200)
.+...+++..++|.+. +.+..+|++.|++.++..+++.
T Consensus 148 ~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 148 FYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHH
Confidence 7777778888887777 3556688887777544333333
No 82
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.36 E-value=3e-06 Score=72.39 Aligned_cols=83 Identities=12% Similarity=0.196 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-HhhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 82 LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIGL-MDSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
+....+..++....++..+.+.+|.+|++.|+++.|+.+..+++++...|.+.. .. .+....+..+++..+++.+...
T Consensus 284 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~-~~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 284 FAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI-SSAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666777788899999999999999999999999999999998882 22 2556677777777777776665
Q ss_pred hcccC
Q psy10821 161 FLPET 165 (200)
Q Consensus 161 ~lpet 165 (200)
.++++
T Consensus 363 ~~~~~ 367 (368)
T TIGR00903 363 LLPND 367 (368)
T ss_pred hCCCC
Confidence 44554
No 83
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.36 E-value=1.2e-06 Score=75.14 Aligned_cols=100 Identities=5% Similarity=-0.110 Sum_probs=63.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hh---cc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YY---KT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~---~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
+.++.+.+.||+|||+.+..+...... .. .. ..+.........+.+++.+........+..|.+|.+.|+++.
T Consensus 64 ~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~ 143 (402)
T TIGR00897 64 SAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAV 143 (402)
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHH
Confidence 456678999999999876543322111 11 11 223333444455555554445555667788999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHH--HHhhcCchH
Q psy10821 117 GVGSMCARLSA-ALTPLIG--LMDSFDKRI 143 (200)
Q Consensus 117 ~l~~~~~~i~~-~~~p~i~--~~~~~~~~~ 143 (200)
|+......++. ..+|.+. +.+..++..
T Consensus 144 g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~ 173 (402)
T TIGR00897 144 GWFWAVYSIGIGVFGSYYSSYAIPAFGEMN 173 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchHH
Confidence 99998888775 4677765 344455433
No 84
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.36 E-value=7.2e-07 Score=78.19 Aligned_cols=118 Identities=11% Similarity=0.007 Sum_probs=71.1
Q ss_pred eeeEEEEEecccchhHHHHHh---Hhhh--hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSW---VYDK--TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
.+..+.+.||+|||+...... .... .......+........+..+++..+..........|.+|.+.|+++.|+.
T Consensus 311 ~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~ 390 (467)
T PRK09556 311 SLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIK 390 (467)
T ss_pred HHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHH
Confidence 344578889999985443211 1111 11111222222223333333333333334456777999999999999999
Q ss_pred HHHHHH-HHHHHHHHH--HHh------------hcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 120 SMCARL-SAALTPLIG--LMD------------SFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 120 ~~~~~i-~~~~~p~i~--~~~------------~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
...+.+ ++.++|.+. ..+ ..++...+.+..+.++++.+..+++
T Consensus 391 ~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 391 GTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 999996 668888888 344 3456777777777777766655543
No 85
>KOG2532|consensus
Probab=98.34 E-value=1.6e-06 Score=76.46 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=90.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhhhcc-----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTYYKT-----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
+.+.++.++||+|-|++...+.....+.... ..+.+.+++.+++.++..+..++.+..+.+...|++.|++..++
T Consensus 89 ~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ai 168 (466)
T KOG2532|consen 89 GQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAI 168 (466)
T ss_pred HHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHH
Confidence 3456688999999998776443333222211 22233567888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhh-cCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 119 GSMCARLSAALTPLIG--LMDS-FDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~-~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
.+....++.+++-.+. +.+. .||+..|++.++++++..++++++
T Consensus 169 l~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 169 LTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999888777654444 4455 899999999999999877766553
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.34 E-value=4.8e-06 Score=72.19 Aligned_cols=122 Identities=12% Similarity=0.099 Sum_probs=78.2
Q ss_pred eEEEEEecccchhHHHHHhHhhhhh---hcc-ccch---HHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYDKTY---YKT-SRTM---EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~-~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
..+.+.||+|||+++..+....... ... ..+. .......++.++......+....+++|.+|++.|+++.|+.
T Consensus 270 ~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~ 349 (418)
T TIGR00889 270 TIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLF 349 (418)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3456789999997766444332221 111 1111 12233344445555566677788999999999999999999
Q ss_pred HHH-HHHHHHHHHHHH--HHhh------cCchHHHHHHHHHHHHHHHH-HhhcccCCCC
Q psy10821 120 SMC-ARLSAALTPLIG--LMDS------FDKRIPTTIFATITLMSGIL-STFLPETWNM 168 (200)
Q Consensus 120 ~~~-~~i~~~~~p~i~--~~~~------~~~~~~~~~~~~~~~~~~i~-~~~lpet~~~ 168 (200)
+.. ..+++.++|.+. +.+. .+++..+.+.+++.++..+. .+++||++++
T Consensus 350 ~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 350 TLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 754 568888999888 3444 24566677777766665554 4446888664
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.33 E-value=1.4e-06 Score=73.29 Aligned_cols=109 Identities=12% Similarity=-0.055 Sum_probs=69.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+..... ... ...+...+....++.+++.+........+..|.+| +.|++..++..
T Consensus 51 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 128 (355)
T TIGR00896 51 LAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYS 128 (355)
T ss_pred HHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHH
Confidence 45667889999999977654332211 111 22334444555566666666666667778889997 57999999988
Q ss_pred HHHHHHHHHHHHHH-H-Hhhc--CchHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG-L-MDSF--DKRIPTTIFATITLM 154 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~-~~~~--~~~~~~~~~~~~~~~ 154 (200)
....++..++|.+. . .+.. +|+..+.+.++..++
T Consensus 129 ~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 129 MALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 87778888888776 2 2332 255566555544433
No 88
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.31 E-value=1.3e-06 Score=74.79 Aligned_cols=119 Identities=6% Similarity=-0.003 Sum_probs=77.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.||+|||+....+...... ......+..+.+...++..+......+....+..|.+|.+ |+++.++....
T Consensus 270 ~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~ 348 (393)
T PRK15011 270 LIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNT 348 (393)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHH
Confidence 3456778999999655432221111 1111223333333333344444444555667889999975 99999998888
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
..+++.++|.+. ..+..++...+.+.++..+++.+..++.||+
T Consensus 349 ~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T PRK15011 349 SRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIKDV 393 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 889999999888 3555677778877777777777777777764
No 89
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.28 E-value=4.9e-09 Score=90.89 Aligned_cols=125 Identities=23% Similarity=0.187 Sum_probs=90.8
Q ss_pred CCCeeeEEEEEecccchhHHHHHhHhhhh---hhcccc---chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 42 DDGKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSR---TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 42 ~~G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
..|.++++.+.||+|||+.+..+...... ....+. +...+....++.+++.++.......|..|.-|++.|+..
T Consensus 60 ~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~ 139 (451)
T PF00083_consen 60 IVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFL 139 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45889999999999999766544332222 112233 556667778888888899999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHH-H----hhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 116 LGVGSMCARLSAALTPLIGL-M----DSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~~-~----~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
.++......+|..++..+.. . .+..|+..+.+.++.+++..+...++||+.
T Consensus 140 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP 195 (451)
T PF00083_consen 140 SSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESP 195 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88777766666666665552 1 224577777777777777666677789873
No 90
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.28 E-value=2.1e-06 Score=75.77 Aligned_cols=118 Identities=11% Similarity=-0.011 Sum_probs=79.7
Q ss_pred CeeeEEEEEec-ccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH---HhHHH
Q psy10821 44 GKFESCRMFDA-FTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL---RNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr-~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v---R~tg~ 116 (200)
+.+.++.+.|| +|||+.+..+....... .....+.........+.+++.+...+....+.+|.+|.+. |.++.
T Consensus 64 ~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~ 143 (475)
T TIGR00924 64 LTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGF 143 (475)
T ss_pred HHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccccccee
Confidence 44567889999 89997766443322221 1122233334444445555566667778899999999764 89999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 117 GVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
++.+...++++.++|.+. +.++.+++..+...++..+++.+...+
T Consensus 144 ~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 144 TLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 355668888888776655555444433
No 91
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.27 E-value=4.1e-06 Score=71.27 Aligned_cols=91 Identities=12% Similarity=-0.088 Sum_probs=64.7
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+..+.+.||+|||+.+..+...... ......+.+.+....++.++..+...+.......+..|.+.|++..+...
T Consensus 57 ~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (381)
T PRK03633 57 GTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYM 136 (381)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 456678899999999766543322221 11223445555666666666666666666666778899999999999998
Q ss_pred HHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG 134 (200)
Q Consensus 121 ~~~~i~~~~~p~i~ 134 (200)
....++..++|.+.
T Consensus 137 ~~~~~g~~~g~~~~ 150 (381)
T PRK03633 137 MVYYLGTVLGQLLV 150 (381)
T ss_pred HHHHHHHHHHHHHH
Confidence 88889999999888
No 92
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.26 E-value=2.9e-06 Score=74.10 Aligned_cols=72 Identities=18% Similarity=0.147 Sum_probs=54.5
Q ss_pred hhhHHHhhccccchhHHhHHHHHHHHHHHHHHHH-HHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc--ccCCC
Q psy10821 96 FAVIYNYSAELFPTVLRNTGLGVGSMCARLSAAL-TPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL--PETWN 167 (200)
Q Consensus 96 ~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~-~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l--pet~~ 167 (200)
......+..|.+|++.|+++.|+....+.+++.+ +|.+. ..+..++...+.+.++.++++++..... +|+|+
T Consensus 365 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 365 VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 3344567789999999999999999998887654 68776 4667788888888888888877766554 55443
No 93
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.26 E-value=8.4e-06 Score=70.58 Aligned_cols=122 Identities=9% Similarity=0.028 Sum_probs=83.5
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhhhcc------ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTYYKT------SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
+.+..+.+.||+|||+....+.......... ..+........++.+++.+........+..|+.|.+.|++..+
T Consensus 54 ~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (410)
T TIGR00885 54 MAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLN 133 (410)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHH
Confidence 3455678999999998776544332221111 2234455666677777788888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HH-h--------------------------hcCchHHHHHHHHHHHHHHHHHhh--cccC
Q psy10821 118 VGSMCARLSAALTPLIG-LM-D--------------------------SFDKRIPTTIFATITLMSGILSTF--LPET 165 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~-~~-~--------------------------~~~~~~~~~~~~~~~~~~~i~~~~--lpet 165 (200)
+......++..++|.+. .. . ..+|+.++...+++.++..+...+ .||.
T Consensus 134 ~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~ 211 (410)
T TIGR00885 134 LAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPAL 211 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99888888888888887 22 1 124677787777766665544433 4653
No 94
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.25 E-value=1.5e-06 Score=74.27 Aligned_cols=117 Identities=15% Similarity=0.240 Sum_probs=74.4
Q ss_pred eeEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+.+.||+|||+.....+... ........+........++.+++..+..+..+.+.+|.+|++.|+++.|+.+..
T Consensus 273 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 273 LLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 44567889999987654332211 111112223333344444455556667778889999999999999999999999
Q ss_pred HHHHHHHHHHHH-H-HhhcCch-HHHHHHHHHHHHHHHHHhhc
Q psy10821 123 ARLSAALTPLIG-L-MDSFDKR-IPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 123 ~~i~~~~~p~i~-~-~~~~~~~-~~~~~~~~~~~~~~i~~~~l 162 (200)
+.+++.++|.+. . .+..+.. ..+.......+++.++.+.+
T Consensus 353 ~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 353 GRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 3 3433333 33444444444455555544
No 95
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.24 E-value=3.3e-06 Score=71.02 Aligned_cols=118 Identities=8% Similarity=0.115 Sum_probs=78.0
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+.+.||+|||+....+....... .....+.+......++.+++.+...+....+..|.+|.+. +++.++.+..
T Consensus 253 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 331 (375)
T TIGR00899 253 LLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRA-GAATTLYTNT 331 (375)
T ss_pred HhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-hHHHHHHHHH
Confidence 34567889999997655332222111 1112222333333444455555566777788999999865 5999999999
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhccc
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPE 164 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpe 164 (200)
..++..++|.+. ..+..++...+.+.++..+++.+...+++|
T Consensus 332 ~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 889999999988 356667778888888777777776665543
No 96
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.24 E-value=1.1e-06 Score=73.26 Aligned_cols=112 Identities=10% Similarity=0.049 Sum_probs=73.9
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhccccc-hHH-HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRT-MEY-ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
.+..+++.||+|||+....+...... ......+ ..+ ......+..+..+...+..+.+.+|.+|++.|++..|+.
T Consensus 257 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 336 (377)
T TIGR00890 257 RPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFL 336 (377)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHH
Confidence 34557789999999765433222111 1111111 111 222233344445555666778999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHH
Q psy10821 120 SMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSG 156 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~ 156 (200)
.....+++.++|.+. ..+..++...+.+.+++++++.
T Consensus 337 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 337 YTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999988 4566777777777776666543
No 97
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.23 E-value=2.6e-06 Score=70.22 Aligned_cols=118 Identities=19% Similarity=0.276 Sum_probs=87.6
Q ss_pred CeeeEEEEEecccchh-HHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKT-MTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+.+..+.+.||+|||+ ....+...... ......+........++.+++.....+....+..|..|.+.|++..|+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T cd06174 227 GALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLF 306 (352)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHH
Confidence 4556677889999998 65543332221 1122333444555666667777888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 120 SMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.....+++.++|.+. ..+..++...+.+.+++.+++.+..++
T Consensus 307 ~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 307 NTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999998 355677888888888888887766544
No 98
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.22 E-value=6.2e-06 Score=71.64 Aligned_cols=75 Identities=17% Similarity=0.042 Sum_probs=57.6
Q ss_pred hhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCCCC
Q psy10821 94 GSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPETWNM 168 (200)
Q Consensus 94 ~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~~~ 168 (200)
+.......+.+|.+|++.|+++.|+.+..+.+++.++|.+. +.+..++...++..+++++++.+.... .++.+++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 33444567789999999999999999999999999999888 466678888888888877776655443 4554443
No 99
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.21 E-value=2.9e-05 Score=65.25 Aligned_cols=122 Identities=12% Similarity=0.021 Sum_probs=78.4
Q ss_pred eeeEEEEEecc-----cchhHHH-HH---hHhh--hhhhccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 45 KFESCRMFDAF-----TNKTMTC-HS---WVYD--KTYYKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 45 ~~~~~~l~Dr~-----GRr~~~~-~~---~~~~--~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
.++.+.+.||+ |||+... .+ .... ...+..+ .+...+....++...+..........+++|.+|.+.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 56678889997 8886532 21 1111 1111111 2222333333344455566667778899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHhhcC--------chHHHHHHHHHHHHHHHHHhh-cccCC
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG--LMDSFD--------KRIPTTIFATITLMSGILSTF-LPETW 166 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~--~~~~~~--------~~~~~~~~~~~~~~~~i~~~~-lpet~ 166 (200)
+.+.++......++..++|.+. +....+ |+..+++.++..++..+..++ .||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999998887778888888777 234455 888888887777766655554 46653
No 100
>PRK10133 L-fucose transporter; Provisional
Probab=98.20 E-value=5.3e-06 Score=72.41 Aligned_cols=90 Identities=9% Similarity=0.012 Sum_probs=65.0
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhhhh------ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKTYY------KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
.+..+.+.||+|||+.+..+........ ....+...+....++.+++.+........++.|..|.+.|....++
T Consensus 78 ~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~ 157 (438)
T PRK10133 78 PIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNL 157 (438)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHH
Confidence 3556788999999987764433222111 1244556667777788888888888888888898888888878888
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10821 119 GSMCARLSAALTPLIG 134 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~ 134 (200)
......++..++|.+.
T Consensus 158 ~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 158 AQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8887778888888775
No 101
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.20 E-value=2.9e-06 Score=72.99 Aligned_cols=97 Identities=13% Similarity=0.099 Sum_probs=60.1
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhhh----ccccchHHHHHHHHHH-HHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTYY----KTSRTMEYILYIVFFG-KFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+..+.+.||+|||+....+........ ....+........+++ .+...+..+..+.++.|.+|++.|+++.|+.+
T Consensus 284 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 363 (426)
T PRK12307 284 IVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIY 363 (426)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHH
Confidence 345677899999976654332221111 1111111222222222 12223445667788899999999999999999
Q ss_pred HHHHHHHHHHHHHH-H-HhhcCch
Q psy10821 121 MCARLSAALTPLIG-L-MDSFDKR 142 (200)
Q Consensus 121 ~~~~i~~~~~p~i~-~-~~~~~~~ 142 (200)
.++.+++.++|.+. . .+..+..
T Consensus 364 ~~~~~~~~~gp~~~g~l~~~~g~~ 387 (426)
T PRK12307 364 NLAATSGTFNSMAATWLGITMGLG 387 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHcccHH
Confidence 99999999999998 3 4445533
No 102
>PTZ00207 hypothetical protein; Provisional
Probab=98.20 E-value=5.9e-06 Score=74.72 Aligned_cols=112 Identities=11% Similarity=-0.032 Sum_probs=71.4
Q ss_pred eEEEEEecccchhHHHHHhHhhhhhh---ccc------cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYDKTYY---KTS------RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
.++.+.||+|||.++..+.+...... ... .+.+.+.+..++.+++.+..+........+.|| +.|++..|
T Consensus 80 p~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~G 158 (591)
T PTZ00207 80 PYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVA 158 (591)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHH
Confidence 46888999999977654332221111 111 233334445556666666666777788899998 78999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Q psy10821 118 VGSMCARLSAAL-TPLIGLMDSFDKRIPTTIFATITLMSGILS 159 (200)
Q Consensus 118 l~~~~~~i~~~~-~p~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (200)
+......+++.+ +++.......++...+++.+++.++..+..
T Consensus 159 i~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 159 IMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999888875 444443333456666666666666654443
No 103
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.18 E-value=1.1e-06 Score=77.15 Aligned_cols=117 Identities=14% Similarity=0.024 Sum_probs=79.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhh---hh--h---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYD---KT--Y---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~---~~--~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
+.+..+.+.||+|||+++..+.... .. . .....+...+....++.+++.+..++....+++|.||.+.|+++
T Consensus 80 ~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a 159 (467)
T PRK09556 80 GKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRF 159 (467)
T ss_pred HHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeee
Confidence 4567899999999997654322111 11 1 11134455666777777888888888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-H-Hhh---cCchHHHHHHHHHHHHHHHHHh
Q psy10821 116 LGVGSMCARLSAALTPLIG-L-MDS---FDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~-~-~~~---~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
.|+....+.+++.+++.+. . ... .+|...+.+.+++.++..+..+
T Consensus 160 ~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 160 LGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred EEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 9998887778888877776 2 222 1456666666666655444433
No 104
>KOG3764|consensus
Probab=98.17 E-value=2.9e-06 Score=72.50 Aligned_cols=122 Identities=16% Similarity=0.123 Sum_probs=100.1
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH-HhHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL-RNTGLGVGS 120 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v-R~tg~~l~~ 120 (200)
++..+.++||+|+|..+.++..+... .+....+.+.+.+.+.+.++..+.....-.+..++.||.+. |++++|...
T Consensus 123 np~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGial 202 (464)
T KOG3764|consen 123 NPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIAL 202 (464)
T ss_pred cccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHH
Confidence 35678899999999877766654433 33345667788888999999999999999999999999987 699999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc-ccCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL-PETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l-pet~ 166 (200)
....+|-.++|-.. +.+..|...||.++++++++-..+.++. +.++
T Consensus 203 gfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 203 GFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred HHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 99999999998887 5788899999999999999988877764 4433
No 105
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.16 E-value=2e-06 Score=74.14 Aligned_cols=119 Identities=17% Similarity=0.112 Sum_probs=75.8
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+.+.||+|||+....+..... .......+..+.+....+..+...........+.+|.+|.+.|++..+..++.
T Consensus 280 ~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 359 (420)
T PRK09528 280 FFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQF 359 (420)
T ss_pred HHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHH
Confidence 345678899999976543322211 11112333444444444444444455556678899999999999987775544
Q ss_pred -HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-ccc
Q psy10821 123 -ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPE 164 (200)
Q Consensus 123 -~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpe 164 (200)
..+++.++|.+. +.+..++...+...+++.++..+..++ +++
T Consensus 360 ~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 360 AKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 448888888888 466678888888887777766555444 344
No 106
>PRK12382 putative transporter; Provisional
Probab=98.16 E-value=6.9e-06 Score=69.97 Aligned_cols=116 Identities=15% Similarity=0.028 Sum_probs=78.7
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+.+.||+|||+....+..... .......+.........+.++..+...+.......|.+|.+.|+++.|+.+..
T Consensus 267 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 267 VLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred HHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 445678899999865443222111 11111233333333444445555556667778889999999999999999999
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
..+++.++|.+. ..+..++...+.+.+++.+++.+..++
T Consensus 347 ~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 347 QDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 889999999888 466678888888888777777665543
No 107
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.15 E-value=3.7e-06 Score=73.64 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=76.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHH-HHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILY-IVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+.++.+.+.||+|||+.+..+..... .......+.+.... ..++.++..+........+..|.|| +.|+++.++.
T Consensus 70 ~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~ 148 (455)
T TIGR00892 70 GGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLA 148 (455)
T ss_pred hhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHH
Confidence 34566889999999976654332211 11111222222222 2244444444444556677889996 7899999999
Q ss_pred HHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 120 SMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.....+++.++|.+. +.+..+|+..++..+++.++..+..++
T Consensus 149 ~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 149 MAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 999888888888777 466778999999988877766554443
No 108
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.14 E-value=9.6e-06 Score=71.36 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=86.1
Q ss_pred eeEEEEEecccchhHHHHH---hHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHS---WVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+.++++.||+|-|+++..+ |...........+...+.+..++.+++.+..+ ....++...||.+.|+++.|+....
T Consensus 80 Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg 158 (511)
T TIGR00806 80 VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAA 158 (511)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 4567889999999776533 33333333334456667788888888888888 9999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHhhcCchHHH---HHHHHHHHHHHHHHhhcc
Q psy10821 123 ARLSAALTPLIG-LMDSFDKRIPT---TIFATITLMSGILSTFLP 163 (200)
Q Consensus 123 ~~i~~~~~p~i~-~~~~~~~~~~~---~~~~~~~~~~~i~~~~lp 163 (200)
..+|..+++.+. .+...+|.... ++-.....++.++.+++|
T Consensus 159 ~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 159 VLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 989999888888 45556666532 233344455667778887
No 109
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.08 E-value=2.7e-06 Score=74.64 Aligned_cols=107 Identities=18% Similarity=0.268 Sum_probs=67.2
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh----hccccchHHHH-HHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY----YKTSRTMEYIL-YIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
|....+++.||+|||+....+....... ........+.. ...++..+...+..+..+.+..|.+|.+.|+++.++
T Consensus 327 g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 406 (496)
T PRK03893 327 GCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGF 406 (496)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccch
Confidence 3455678889999997655333221111 11112222222 222222333344556677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHH
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFAT 150 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~ 150 (200)
.+..+.+++.++|.+. ..+..++...+...+.
T Consensus 407 ~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 407 TYNVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred hhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 9999999999999988 3556666655544443
No 110
>KOG2615|consensus
Probab=98.07 E-value=3.4e-06 Score=71.79 Aligned_cols=117 Identities=20% Similarity=0.293 Sum_probs=74.1
Q ss_pred EEEEecccchhHHHHHhHhhhhhhc---cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHH
Q psy10821 49 CRMFDAFTNKTMTCHSWVYDKTYYK---TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARL 125 (200)
Q Consensus 49 ~~l~Dr~GRr~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i 125 (200)
+.+.||+|||+++..+.+....++. .+.+...++...++++++ .+..++.-++++|+++.+.|+.+++.......+
T Consensus 89 G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~-kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~l 167 (451)
T KOG2615|consen 89 GCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIF-KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGL 167 (451)
T ss_pred hhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cCchHHHHHHHHhhcChhhccceeeeeehhhhc
Confidence 6788999999877655443333222 233333344445555544 455678889999999999999999998888888
Q ss_pred HHHHHHHHH-HHhh---cCchHHHHH----HHHHHHH-HHHHHhhcccCC
Q psy10821 126 SAALTPLIG-LMDS---FDKRIPTTI----FATITLM-SGILSTFLPETW 166 (200)
Q Consensus 126 ~~~~~p~i~-~~~~---~~~~~~~~~----~~~~~~~-~~i~~~~lpet~ 166 (200)
|-+++|.+. ++.. ....+++.+ ..+.+.. ..+..+++|||-
T Consensus 168 GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 168 GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 888888887 3222 333334333 2222222 233456689983
No 111
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.06 E-value=4.4e-05 Score=65.32 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=68.6
Q ss_pred eeEEEEEecccchhHHH-HHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH--HHHH
Q psy10821 46 FESCRMFDAFTNKTMTC-HSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG--LGVG 119 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg--~~l~ 119 (200)
+.+.. .||+|||+... .+.... ........+.+.+.....+.........+....+..|..|.+-|..+ .++.
T Consensus 70 ~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (393)
T PRK15011 70 FLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFL 148 (393)
T ss_pred HHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHH
Confidence 33455 89999986532 222211 11111223333333333333333344455566777777766655432 3566
Q ss_pred HHHHHHHHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHHHH-hhcccCC
Q psy10821 120 SMCARLSAALTPLIG-L-MDSFDKRIPTTIFATITLMSGILS-TFLPETW 166 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~ 166 (200)
.....++..++|.+. . .+..+|+..++..++..++..+.. .++||.+
T Consensus 149 ~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 149 RAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 666678888888888 3 457799988888887777665554 4467653
No 112
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.06 E-value=2.1e-05 Score=71.15 Aligned_cols=112 Identities=20% Similarity=0.142 Sum_probs=73.9
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhhh---ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTYY---KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.|.||||...+.+-.+..... ....+....+....+.++. .+........++|+.|.|.|..+.++....
T Consensus 96 ~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~~~~~~~~~ 174 (599)
T PF06609_consen 96 PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG-AGVQELAALAISELVPNKWRGLGLAIASIP 174 (599)
T ss_pred HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhhHhHHHHHH
Confidence 455788999999987775443332222 1234445555555555555 344445667789999999999888777654
Q ss_pred HHHHHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHHH
Q psy10821 123 ARLSAALTPLIG-L-MDSFDKRIPTTIFATITLMSGIL 158 (200)
Q Consensus 123 ~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i~ 158 (200)
..+....+|.+. . ..+.+|++.+++..+...++++.
T Consensus 175 ~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 175 FIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 445555677777 2 34567999888888777776554
No 113
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.04 E-value=1.4e-05 Score=68.54 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=75.4
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhhh---h-ccccchHHHHHHHHHHHHHHhhhhhhHHHhhcccc-chhHHhHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKTY---Y-KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELF-PTVLRNTGLGVG 119 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElf-Pt~vR~tg~~l~ 119 (200)
.+..+.+.||+|||+....+....... . ....+.... ..++.++.....++.......+.+ |++.|++..++.
T Consensus 257 ~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~ 334 (393)
T PRK09705 257 ALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFM 334 (393)
T ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 344567889999986554332221111 1 112222222 122334444455555555666666 578999999999
Q ss_pred HHHHHHHHHHHHHHH--HHhhcC-chHHHHHHHHHHHHHHHHH-hhcccCCCCCch
Q psy10821 120 SMCARLSAALTPLIG--LMDSFD-KRIPTTIFATITLMSGILS-TFLPETWNMVCD 171 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~--~~~~~~-~~~~~~~~~~~~~~~~i~~-~~lpet~~~~l~ 171 (200)
+.++.+++.++|.+. +.+..+ ....+++.+..+++..++. .+.|||++|...
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWV 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhc
Confidence 999999999999998 355555 4455666565555555543 446998877543
No 114
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.04 E-value=2.9e-05 Score=66.75 Aligned_cols=113 Identities=19% Similarity=0.176 Sum_probs=72.4
Q ss_pred eEEEEEecccchhHHHHHh---Hhhhhhhcc---ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSW---VYDKTYYKT---SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
.-+.+.||+|-|++...+. .++...... ..+.+.++.+.++.+ ..++.+++...+.++.||.|.++++.|+.-
T Consensus 68 ~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G-~~GasFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 68 PYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLG-LAGASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHh-cccceehcccccccccCChhhhhHHHHHhc
Confidence 3478999999986654332 333332222 222223333333333 335567777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--HhhcC---chHHHHHHHHHHHHHHHHHhh
Q psy10821 121 MCARLSAALTPLIGL--MDSFD---KRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 121 ~~~~i~~~~~p~i~~--~~~~~---~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.|++|..+..++.+ ....+ |.....++....++..+..++
T Consensus 147 -~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 147 -AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred -cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777772 44445 666666666666665554443
No 115
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.99 E-value=0.00011 Score=64.78 Aligned_cols=86 Identities=16% Similarity=0.261 Sum_probs=58.1
Q ss_pred EEEEEecccchhHHHHHhH---hhhhhhcc-----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWV---YDKTYYKT-----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
.+.+.||+|.|++...+.. ........ .++...+....++.++. +..++.....+++.||.+.|+++.|+.
T Consensus 90 ~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~ 168 (462)
T PRK15034 90 YSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGIN 168 (462)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHH
Confidence 4788899999865543322 22221111 13455566666666665 667888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy10821 120 SMCARLSAALTPLIG 134 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~ 134 (200)
...+.++..+.+++.
T Consensus 169 ~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 169 GGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHhhHHHHHHHHH
Confidence 866666665554444
No 116
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.97 E-value=1e-05 Score=67.53 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=54.2
Q ss_pred HHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-HhhcC-chHHHHHHHHHHHHHHHHH
Q psy10821 91 CIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSFD-KRIPTTIFATITLMSGILS 159 (200)
Q Consensus 91 ~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~~-~~~~~~~~~~~~~~~~i~~ 159 (200)
+..+..+..+.+.+|.+|++.|+++.++...+..+++.++|.+. . .+..+ +...+.+.++..+++.+..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 324 FGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred hchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 33346788899999999999999999999999999999999998 3 45555 6666666666666655544
No 117
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.96 E-value=3.6e-05 Score=68.44 Aligned_cols=111 Identities=7% Similarity=-0.103 Sum_probs=71.0
Q ss_pred eeEEEEEec-ccchhHHHHHhHhhhh---hhccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH--HhHHHHH
Q psy10821 46 FESCRMFDA-FTNKTMTCHSWVYDKT---YYKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL--RNTGLGV 118 (200)
Q Consensus 46 ~~~~~l~Dr-~GRr~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v--R~tg~~l 118 (200)
++++++.|| +|||+....+...... ..... ...........+.+++.+...+....+.+|.||.+. |..+.++
T Consensus 75 ~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~ 154 (500)
T PRK09584 75 AIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTM 154 (500)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchH
Confidence 356899999 5999766543322221 11112 222233333444455555566677789999998643 4567787
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHH
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSG 156 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~ 156 (200)
.+...++++.++|.+. +.+..+|+..|.+.++...++.
T Consensus 155 ~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 155 YYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7888889999999998 3566788888887665444443
No 118
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.96 E-value=0.00013 Score=62.67 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=79.3
Q ss_pred CeeeEEEEEecc-----cchh-HHHHHhH---hhhh--hhccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH
Q psy10821 44 GKFESCRMFDAF-----TNKT-MTCHSWV---YDKT--YYKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL 111 (200)
Q Consensus 44 G~~~~~~l~Dr~-----GRr~-~~~~~~~---~~~~--~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v 111 (200)
..++.+.+.||+ |||+ .+..+.. .... ..... .+.+.+....++..++.+........+.+|.+|.+.
T Consensus 48 ~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 127 (402)
T PRK11902 48 FKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE 127 (402)
T ss_pred HHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 345667889999 8874 3322111 1111 11112 222333333344456666677778899999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHH-H-Hhh-cCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIG-L-MDS-FDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~-~-~~~-~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
|+++.++......++..+++.+. . .+. .+|+..+++.++..++..+..++.||++
T Consensus 128 r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~ 185 (402)
T PRK11902 128 RGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPE 185 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999987778888877776 3 343 4788888888887776655555667653
No 119
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.92 E-value=8.7e-05 Score=66.44 Aligned_cols=117 Identities=15% Similarity=0.067 Sum_probs=79.7
Q ss_pred eeEEEEEecccchhHHHHHhHhh--------hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYD--------KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
+.++.+.||+.||+++...-... ........+.+.+....++.+++.+...+...++++|+.|.+.-..+.+
T Consensus 63 l~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~a 142 (524)
T PF05977_consen 63 LFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANA 142 (524)
T ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHH
Confidence 45788999999997765322111 1111112334445566666777778888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 118 VGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
+.....++...++|.+. +....+....|.+-++.-+++.++....
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98888888888888888 3555666666666555444444443333
No 120
>PRK03545 putative arabinose transporter; Provisional
Probab=97.89 E-value=4e-05 Score=65.38 Aligned_cols=117 Identities=9% Similarity=-0.014 Sum_probs=74.5
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh--hh-ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT--YY-KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
.+..+.+.||+|||.+.......... .. ....+........++.++..............|..| +.|+++.|+...
T Consensus 258 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 336 (390)
T PRK03545 258 SVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSG 336 (390)
T ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHH
Confidence 34457788999998654332221111 11 112233333333444444444444455667778877 688999999988
Q ss_pred HHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 122 CARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 122 ~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
...++..++|.+. ..+..+....+...+.+.+++.+.....
T Consensus 337 ~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 337 IFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 8888998999998 4677888888888888777776665543
No 121
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.88 E-value=8.5e-06 Score=68.38 Aligned_cols=104 Identities=16% Similarity=0.100 Sum_probs=65.3
Q ss_pred eEEEEEecccchhHHHHH-hHh--hh---hhhc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHS-WVY--DK---TYYK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~-~~~--~~---~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+.+.+.||+|||+..... ... .. .... ...+........++..++....++....+.+|.+|.+.|+++.++.
T Consensus 274 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 353 (394)
T TIGR00883 274 LSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLA 353 (394)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeeh
Confidence 446788999999754421 111 11 1111 1222233334444555666677788899999999999999999998
Q ss_pred HHHHH-HHHHHHHHHH--HHhhcC-chHHHHHHHH
Q psy10821 120 SMCAR-LSAALTPLIG--LMDSFD-KRIPTTIFAT 150 (200)
Q Consensus 120 ~~~~~-i~~~~~p~i~--~~~~~~-~~~~~~~~~~ 150 (200)
++++. +++.++|.+. +.+..+ +....++...
T Consensus 354 ~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 354 YNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 87766 6777999888 355555 4444444333
No 122
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.87 E-value=0.00023 Score=61.31 Aligned_cols=124 Identities=13% Similarity=0.024 Sum_probs=68.8
Q ss_pred CCeeeEEEEEec----ccchh-HHHHHhH---hhhhhhc-ccc-c----hHHHHHHHHHHHHHHhhhhhhHHHhhcccc-
Q psy10821 43 DGKFESCRMFDA----FTNKT-MTCHSWV---YDKTYYK-TSR-T----MEYILYIVFFGKFCIAGSFAVIYNYSAELF- 107 (200)
Q Consensus 43 ~G~~~~~~l~Dr----~GRr~-~~~~~~~---~~~~~~~-~~~-~----~~~~~~~~~l~~~~~~~~~~~~~~~~sElf- 107 (200)
...+..+.+.|| +|||+ .+..+.. ....... .+. . ..+.....++...+.+....+..++.+|+.
T Consensus 50 i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 129 (437)
T TIGR00792 50 ITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITL 129 (437)
T ss_pred hccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccC
Confidence 356788999998 67753 3322211 1111111 111 1 122222333333344444455677888987
Q ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHH--HH-------hhcCchHHHHHHHHHHHHHHHHH-hhcccCC
Q psy10821 108 PTVLRNTGLGVGSMCARLSAALTPLIG--LM-------DSFDKRIPTTIFATITLMSGILS-TFLPETW 166 (200)
Q Consensus 108 Pt~vR~tg~~l~~~~~~i~~~~~p~i~--~~-------~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~ 166 (200)
+.+.|.+..++....+.+++.+.+.+. +. +..+|...+.+.++++++..+.. ...||.+
T Consensus 130 ~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 130 DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 578999999988777767666555443 11 13456667777777776665543 4457654
No 123
>PRK03699 putative transporter; Provisional
Probab=97.84 E-value=1.7e-05 Score=67.82 Aligned_cols=119 Identities=8% Similarity=0.065 Sum_probs=77.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.||+|||+.+........ .......+..+.....+..+++..+.++....+..|..|.+ |++..+.....
T Consensus 259 ~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 337 (394)
T PRK03699 259 WIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTC 337 (394)
T ss_pred HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHh
Confidence 344677899999976553222111 11112333344444445555666667777777888887754 67778888888
Q ss_pred HHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 123 ARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 123 ~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
+.+++.++|.+. +.+..+....++..+++.+++.+....++++
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFV 382 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 889999999998 4566777777777777777766665555544
No 124
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.82 E-value=3.1e-05 Score=65.98 Aligned_cols=114 Identities=9% Similarity=0.062 Sum_probs=78.7
Q ss_pred EEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~ 124 (200)
.+.+.||+|||+....+....... .....+.+......++.+++.+...+....+..|..|.+.|++..++......
T Consensus 278 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 357 (408)
T PRK09874 278 LGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRD 357 (408)
T ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHH
Confidence 356889999987655433222111 11122333334444455566666677777788889999999999999998888
Q ss_pred HHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 125 LSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 125 i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
++..++|.+. ..+..++...+.+.+++.+++.+..++
T Consensus 358 ~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 358 IGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 356677888888888888877766554
No 125
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.81 E-value=1.3e-05 Score=70.56 Aligned_cols=117 Identities=7% Similarity=0.094 Sum_probs=70.9
Q ss_pred eeeEEEEEecccchh-------HHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhH
Q psy10821 45 KFESCRMFDAFTNKT-------MTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNT 114 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~t 114 (200)
.++.+++.||+|||. .......... .......+....+...++..++.....+..+.+.+|+.| +.|++
T Consensus 305 ~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~ 383 (476)
T PLN00028 305 RPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGV 383 (476)
T ss_pred HhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchh
Confidence 345678999998751 1111111111 111112222223333334444445556667777888765 79999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 115 GLGVGSMCARLSAALTPLIGLMD-SFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 115 g~~l~~~~~~i~~~~~p~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
..|+....+.+++.++|++.... ..++...+++.+++.+++.++.++.
T Consensus 384 ~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 384 ISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 99999888888999999876432 2346667777777777777776665
No 126
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.79 E-value=1.9e-05 Score=66.78 Aligned_cols=95 Identities=22% Similarity=0.326 Sum_probs=63.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh----hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT----YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
+..+.+.||+|||+....+...... ......+........++..++..+.++..+.+.+|.+|++.|+++.|+.+.
T Consensus 292 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 371 (405)
T TIGR00891 292 CVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQ 371 (405)
T ss_pred HHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHH
Confidence 3456788999999765533322211 111122222233333444455566677788899999999999999999999
Q ss_pred HHHHHHHHHHHHH-H-HhhcC
Q psy10821 122 CARLSAALTPLIG-L-MDSFD 140 (200)
Q Consensus 122 ~~~i~~~~~p~i~-~-~~~~~ 140 (200)
++.+++.++|.+. . .+..+
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999998 3 44444
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.74 E-value=0.00017 Score=61.38 Aligned_cols=117 Identities=9% Similarity=0.002 Sum_probs=71.8
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhhhhc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKTYYK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA 123 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~ 123 (200)
....+.+.||+|||+.+..+......... .... ........+.++......+....+..|..|.+.+....+......
T Consensus 252 ~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (381)
T PRK03633 252 QWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSY 330 (381)
T ss_pred HhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 34456788999999765433222111110 0111 112222223333334556777788889999988777777666556
Q ss_pred HHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 124 RLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 124 ~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
.+++.++|.+. ..+..++...+.+.+.+.++..+..+..
T Consensus 331 ~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 331 TVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 68899999888 4677788888888777777666555544
No 128
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.72 E-value=5.1e-05 Score=65.96 Aligned_cols=67 Identities=16% Similarity=0.074 Sum_probs=50.8
Q ss_pred HHhhccccchhHHhHHHHHHHHHHHHHH-HHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCC
Q psy10821 100 YNYSAELFPTVLRNTGLGVGSMCARLSA-ALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTF-LPETW 166 (200)
Q Consensus 100 ~~~~sElfPt~vR~tg~~l~~~~~~i~~-~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~ 166 (200)
.....|.+|.+.|+++.|+.+..+.+++ .++|.+. ..+..++...+.+..+..+++.+..++ .||.|
T Consensus 367 ~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 367 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4567899999999999999999888765 5788887 356667777777777766666665554 47765
No 129
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.71 E-value=8.8e-05 Score=63.20 Aligned_cols=120 Identities=5% Similarity=0.032 Sum_probs=70.1
Q ss_pred CeeeEEEEEecccch----hHHH-HHhHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNK----TMTC-HSWVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
+.+..+.+.||+||| +..+ ..............+.+.+.....+.+++.+...+....+..+. .+.|.++.+.
T Consensus 55 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~ 132 (382)
T PRK11128 55 GSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGK 132 (382)
T ss_pred hhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcch
Confidence 445556789999984 2222 21111111111223333344444444555555555555555554 4558888888
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
....+.++..++|.+. +.+..+|+..++..++..++..+...+.||.
T Consensus 133 ~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 181 (382)
T PRK11128 133 VRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCC
Confidence 8888889999999998 3566788888877665544444444445654
No 130
>KOG2533|consensus
Probab=97.70 E-value=5.4e-05 Score=67.23 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=93.0
Q ss_pred CeeeEEEEEecccchhHHH-H--HhHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTC-H--SWVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.+.++.+.||+.-...+. . .|...........+.+..++..++.+++.++.++....+++-.|..+.|++-+++-+
T Consensus 97 ~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~ 176 (495)
T KOG2533|consen 97 GQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWY 176 (495)
T ss_pred HHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHH
Confidence 5567788999998544333 2 222221111113456678889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH--------hhcCchHHHHHHHHHHHHHHHHHhh-cccCC
Q psy10821 121 MCARLSAALTPLIGLM--------DSFDKRIPTTIFATITLMSGILSTF-LPETW 166 (200)
Q Consensus 121 ~~~~i~~~~~p~i~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~ 166 (200)
+.+.++++++.+++.. ...+|.+.|++-+++++...+..++ +|+..
T Consensus 177 a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 177 ASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred HhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 9999999998888832 3467999999999988887766554 66543
No 131
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.68 E-value=5.8e-05 Score=69.07 Aligned_cols=85 Identities=16% Similarity=0.220 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhhc-------------------
Q psy10821 81 ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSF------------------- 139 (200)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~------------------- 139 (200)
+++..++.+++.+..++....++.|.+|.+.|++..++.+....++..+++.+. . ...+
T Consensus 175 ~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dpr 254 (633)
T TIGR00805 175 FLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPR 254 (633)
T ss_pred hHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCcc
Confidence 345667777777788888899999999999999999999999888888888877 2 2111
Q ss_pred ---CchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 140 ---DKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 140 ---~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
.|+..|++.+++.++.++..+++|++
T Consensus 255 WiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 255 WIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 15566777777777766655666654
No 132
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.66 E-value=8.2e-05 Score=65.95 Aligned_cols=122 Identities=10% Similarity=0.052 Sum_probs=77.1
Q ss_pred CeeeEEEEEecccchhHHHHHhH---hhhhhh---ccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV---YDKTYY---KTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~~---~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
|.++++.+.||+|||+....... .....+ ... .+........++..+..+...+..+.+..|+.|.+.+++..
T Consensus 275 G~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~ 354 (491)
T PRK11010 275 GALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQF 354 (491)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 44556788899998765442211 111110 111 12222222333333344445566788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 117 GVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
++.+....+++.+.+.+. ..+..++...+.+.+++++.+.+....++++
T Consensus 355 gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 355 ALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998888877666655 4666787777888888888877776666543
No 133
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.65 E-value=7.1e-05 Score=64.65 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=41.7
Q ss_pred hhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-HhhcC-chHHHHHHHH
Q psy10821 96 FAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSFD-KRIPTTIFAT 150 (200)
Q Consensus 96 ~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~~-~~~~~~~~~~ 150 (200)
.+..+....|.+|++.|+++.|+.+..+++++.++|.+. . .+..+ +...+.+.++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 351 MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 344556778999999999999999999999999999988 3 44443 4555544443
No 134
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.58 E-value=0.00028 Score=60.55 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=71.9
Q ss_pred eeeEEEEEecccchhHHH-HH---hHhhhhhh---c--cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 45 KFESCRMFDAFTNKTMTC-HS---WVYDKTYY---K--TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~-~~---~~~~~~~~---~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
.+..+.+.||+|||+... .. ........ . ...+........++.+++.....+ .....+|..|. .|+++
T Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-~~g~~ 351 (402)
T TIGR00897 274 NVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-HKGAA 351 (402)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-hhHHH
Confidence 345578899999885432 11 11111111 1 112222333333344444444333 34566787664 79999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 116 LGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
.|+.+....+++.++|.+. ..+..++...+.+.+++.+++.+...++
T Consensus 352 ~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 352 MSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988 4667787888888887777776665553
No 135
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.57 E-value=0.00017 Score=63.83 Aligned_cols=126 Identities=17% Similarity=0.122 Sum_probs=93.5
Q ss_pred CCeeeEEEEEecccch--hHHHHH---hHh-hhhhhc-------cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccch
Q psy10821 43 DGKFESCRMFDAFTNK--TMTCHS---WVY-DKTYYK-------TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT 109 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr--~~~~~~---~~~-~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt 109 (200)
+|.++.+++-||+|.| +++... +.. +..... ...+.+......++.+++.++.++..=.+.+|+-|.
T Consensus 332 ~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~ 411 (477)
T PF11700_consen 332 IGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP 411 (477)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence 4677778899999999 544422 211 111111 022334456667778888899999999999999999
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHH-H-HhhcC-chHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy10821 110 VLRNTGLGVGSMCARLSAALTPLIG-L-MDSFD-KRIPTTIFATITLMSGILSTFLPETWNM 168 (200)
Q Consensus 110 ~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~~-~~~~~~~~~~~~~~~~i~~~~lpet~~~ 168 (200)
...+.-.|+-...++..++++|++. . .+..+ .+..+....++.+++.++.+..++.|++
T Consensus 412 g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 412 GREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhh
Confidence 9999999999999999999999999 3 34443 6677888888888888888777776654
No 136
>TIGR00895 2A0115 benzoate transport.
Probab=97.56 E-value=9.7e-05 Score=62.13 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=61.8
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
++.+.+.||+|||........... .......+........++.+++.+...+....+.+|.+|++.|+++.|+...+
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 382 (398)
T TIGR00895 303 IIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGI 382 (398)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 445678899999844332211111 11111223334445555666777778888999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy10821 123 ARLSAALTPLIG 134 (200)
Q Consensus 123 ~~i~~~~~p~i~ 134 (200)
+.+++.++|.+.
T Consensus 383 ~~~g~~~g~~~~ 394 (398)
T TIGR00895 383 GRLGAIIGPILA 394 (398)
T ss_pred HHHHHHHHHHhH
Confidence 999999998775
No 137
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.53 E-value=0.00084 Score=56.00 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=68.4
Q ss_pred chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhh----------------
Q psy10821 77 TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDS---------------- 138 (200)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~---------------- 138 (200)
+..+.+...++.+.+.+........|++++.|.+.|++-+++......+|..++|++. +...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 3556677777778888889999999999999999999999999999999999999999 2311
Q ss_pred cCchHHHHHHHHHHHHHHHHHhh--cccCCC
Q psy10821 139 FDKRIPTTIFATITLMSGILSTF--LPETWN 167 (200)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~i~~~~--lpet~~ 167 (200)
.++..+++..+.+..+..+...+ +||.+.
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~ 119 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQE 119 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCc
Confidence 24566777666655554444433 466543
No 138
>PRK10504 putative transporter; Provisional
Probab=97.50 E-value=0.00088 Score=58.49 Aligned_cols=88 Identities=14% Similarity=0.183 Sum_probs=57.0
Q ss_pred eEEEEEecccchhHHHHHhHhhh---h--hhccccchHH-HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYDK---T--YYKTSRTMEY-ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~~---~--~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+.+.+.||+|||+.+..+..... . .........+ .....++.++..+..++....+..+..|.+.|+++.++..
T Consensus 316 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 316 IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHH
Confidence 35678899999876553322111 1 1111112222 2223333445566667778899999999999999999998
Q ss_pred HHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG 134 (200)
Q Consensus 121 ~~~~i~~~~~p~i~ 134 (200)
....++..++|.+.
T Consensus 396 ~~~~~g~~ig~~i~ 409 (471)
T PRK10504 396 MIMQLSMSIGVTIA 409 (471)
T ss_pred HHHHHHHHHHHHHH
Confidence 88878888887776
No 139
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.48 E-value=0.0014 Score=56.69 Aligned_cols=120 Identities=11% Similarity=0.049 Sum_probs=68.8
Q ss_pred eeeEEEEEe----cccchhHHH-HHhH---hhh--hhhc-c---cc--chHHHHHHHHHHHHHHhhhhhhHHHhhccccc
Q psy10821 45 KFESCRMFD----AFTNKTMTC-HSWV---YDK--TYYK-T---SR--TMEYILYIVFFGKFCIAGSFAVIYNYSAELFP 108 (200)
Q Consensus 45 ~~~~~~l~D----r~GRr~~~~-~~~~---~~~--~~~~-~---~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfP 108 (200)
.++.+.++| |+|||+-.. .+.. +.. .... . +. ...|.....++..++......+..++.+|+.+
T Consensus 54 dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~ 133 (428)
T PF13347_consen 54 DPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTP 133 (428)
T ss_pred CCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccc
Confidence 467899999 799884221 1111 111 1111 1 11 11233334444456666677778899999998
Q ss_pred -hhHHhHHHHHHHHHHHHHHHHHHHHH--HH---hhc----CchHHHHHHHHHHHHHHHHHhh-ccc
Q psy10821 109 -TVLRNTGLGVGSMCARLSAALTPLIG--LM---DSF----DKRIPTTIFATITLMSGILSTF-LPE 164 (200)
Q Consensus 109 -t~vR~tg~~l~~~~~~i~~~~~p~i~--~~---~~~----~~~~~~~~~~~~~~~~~i~~~~-lpe 164 (200)
.+.|.+..+.....+.+++.+...+. .. .+. ++.....+.+++.++..+...+ .+|
T Consensus 134 ~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 134 DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 56899999988888777765544444 11 111 3445555566666655544444 577
No 140
>KOG0253|consensus
Probab=97.44 E-value=0.00053 Score=58.71 Aligned_cols=124 Identities=12% Similarity=0.082 Sum_probs=92.6
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhh---hhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDK---TYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|...-+...|++|||+.......... .....+.+..++.....+.+++.++ .+...++-.|.-|...|.+-+-..
T Consensus 129 ga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~- 206 (528)
T KOG0253|consen 129 GAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS- 206 (528)
T ss_pred hhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-
Confidence 55566889999999976654333222 2223466777788888888888777 888889999999999999988877
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCCCCC
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETWNMV 169 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~~ 169 (200)
....++......+. .+.+.+|++..+.......+.+...+.+||..+-.
T Consensus 207 ~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 207 FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh
Confidence 66668888888887 47788888887777766666677777788876543
No 141
>KOG2816|consensus
Probab=97.43 E-value=0.00028 Score=62.22 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=81.2
Q ss_pred eEEEEEecccchhHHHHHhHhh---hhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYD---KTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA 123 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~ 123 (200)
.-+.+.||+|||..+....... ........ +|... ..-........++....|+++.-..+.|....++....-
T Consensus 81 ~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~ 157 (463)
T KOG2816|consen 81 LIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTF 157 (463)
T ss_pred hhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHH
Confidence 3478899999997665333222 22222222 33322 111223345667788999999999999999999999988
Q ss_pred HHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCCCCCc
Q psy10821 124 RLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETWNMVC 170 (200)
Q Consensus 124 ~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~~~l 170 (200)
..+..++|... .....+...++.+..+..++..+.. +++||+...+.
T Consensus 158 ~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 158 GAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred HHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 88888888888 3555666677777777777776654 45788765443
No 142
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.40 E-value=0.0042 Score=52.93 Aligned_cols=116 Identities=11% Similarity=-0.018 Sum_probs=71.3
Q ss_pred EEEEEecccchhHHHHH--hH----hhhhhhc-cc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHS--WV----YDKTYYK-TS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~--~~----~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
..+..||.|||+..+.. .. ....... .. ....+.........++.+......-.+..|..+.+.|+...+..
T Consensus 59 ~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~ 138 (390)
T TIGR02718 59 DNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQ 138 (390)
T ss_pred hccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHH
Confidence 35678889988654211 11 1111111 11 11233333333344455555555667788999999888877776
Q ss_pred HHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcc
Q psy10821 120 SMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLP 163 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lp 163 (200)
.....+|..+++... +.+..+|+.++++.+++.++..+..++.+
T Consensus 139 ~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 139 IAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 665567777777665 46778999999998888877666655553
No 143
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.39 E-value=0.003 Score=56.05 Aligned_cols=79 Identities=10% Similarity=-0.104 Sum_probs=48.9
Q ss_pred HHHHHhhhhhhHHHhhccccchhHHh--HHHHHHHHHHHHHHHHHHHHH-HH--hh--------------cCchHHHHHH
Q psy10821 88 GKFCIAGSFAVIYNYSAELFPTVLRN--TGLGVGSMCARLSAALTPLIG-LM--DS--------------FDKRIPTTIF 148 (200)
Q Consensus 88 ~~~~~~~~~~~~~~~~sElfPt~vR~--tg~~l~~~~~~i~~~~~p~i~-~~--~~--------------~~~~~~~~~~ 148 (200)
..+......++.-++++|+.|.+.|. .+.++......+|+.+++.+. .. .+ .+.+..|++-
T Consensus 124 ld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~ 203 (477)
T TIGR01301 124 LDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLID 203 (477)
T ss_pred HHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHH
Confidence 34566667778889999999999875 455555555556666666655 21 11 1234456666
Q ss_pred HHHHHHHHHHHh-hcccCC
Q psy10821 149 ATITLMSGILST-FLPETW 166 (200)
Q Consensus 149 ~~~~~~~~i~~~-~lpet~ 166 (200)
+++.+++..... ..||.+
T Consensus 204 a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 204 IILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHeeeeeccC
Confidence 665555555444 457754
No 144
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.33 E-value=0.00061 Score=58.68 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=55.3
Q ss_pred eEEEEEecccchhHHHHHhHhhhhh---hc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccc-------hhHHhHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYDKTY---YK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFP-------TVLRNTG 115 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfP-------t~vR~tg 115 (200)
+.+.+.||+|||+....+....... .. ...+........++.++..+..++..+.+.+|..| .+.+++.
T Consensus 276 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 355 (437)
T TIGR00792 276 LFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLV 355 (437)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHH
Confidence 3456789999986655333222111 11 12222333344445556666777888888888865 4556778
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10821 116 LGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~ 134 (200)
.|+......+++.+++.+.
T Consensus 356 ~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 356 YSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888887788888888877
No 145
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.30 E-value=0.00022 Score=61.41 Aligned_cols=52 Identities=19% Similarity=0.165 Sum_probs=36.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 111 LRNTGLGVGSMCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 111 vR~tg~~l~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
.|+...+.....+.++..++|.+. .+.+.+++.+++..++.+++..+..++.
T Consensus 138 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 138 RSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred hccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcc
Confidence 345566677777778888888888 4555678888887777777666665554
No 146
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.30 E-value=0.00082 Score=59.31 Aligned_cols=117 Identities=9% Similarity=0.050 Sum_probs=71.0
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh------hhccc---cchHHHHHHHHHHHHHHhhhhhhHHHhhccccch------
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT------YYKTS---RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT------ 109 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt------ 109 (200)
.++++++.||+|+|+++..++..... ..... .+........+...+..+..++..+-+++..||.
T Consensus 303 rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~ 382 (462)
T PRK15034 303 RSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRV 382 (462)
T ss_pred HHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcc
Confidence 35789999999999766543331111 11111 1112222233333455566777888899999985
Q ss_pred ---------------hHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcC-chHHHHHHHHHHHHHHHHHhh
Q psy10821 110 ---------------VLRNTGLGVGSMCARLSAALTPLIG--LMDSFD-KRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 110 ---------------~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~-~~~~~~~~~~~~~~~~i~~~~ 161 (200)
+.=+...|+...++.+|+++.|.+. ..+..+ ....++.+.+..+++.++.+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 383 KMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred cccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 1345677888888889999999887 344434 445566666666666555443
No 147
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.29 E-value=0.00071 Score=57.69 Aligned_cols=112 Identities=12% Similarity=0.007 Sum_probs=72.8
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhhh---ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTYY---KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
..+..+.||+|+|+.+..+........ ...++.+.+....++-++..+........++++. |.+.|+++.++....
T Consensus 258 ~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 258 AFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred HHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHH
Confidence 334567788998877664444332211 1233444445555666666677777788888888 999999999997655
Q ss_pred HH-HHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH
Q psy10821 123 AR-LSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS 159 (200)
Q Consensus 123 ~~-i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (200)
.. ++..++|.+. +.+..+ ...+...+++++++.+..
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLG-AGTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHH
Confidence 54 7888888888 355555 355666666666554443
No 148
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.20 E-value=0.0022 Score=54.81 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=72.0
Q ss_pred EEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH-H
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC-A 123 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~-~ 123 (200)
.+.+.||+|||+....+...... ......+.++.....++.++...........+..|.+|.+.|+++.+..++. .
T Consensus 274 ~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~ 353 (396)
T TIGR00882 274 APLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAK 353 (396)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHH
Confidence 35678999999766543332211 1112334444444444444444444555667888999999999988875544 4
Q ss_pred HHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH
Q psy10821 124 RLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS 159 (200)
Q Consensus 124 ~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (200)
.+++.++|.+. +.+..+....+.+.+++.++..+..
T Consensus 354 ~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 354 QLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 58999999888 4566788888888777776655443
No 149
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.19 E-value=0.0019 Score=56.15 Aligned_cols=122 Identities=16% Similarity=0.083 Sum_probs=80.9
Q ss_pred EEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~ 124 (200)
+-.+++|+|.|+.+..+...... .....++.+++...-++-++-.....-...-|+++.||+|..+|...+..+...
T Consensus 279 ~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~ 358 (412)
T PF01306_consen 279 SPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAK 358 (412)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTH
T ss_pred HHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence 34677889999777644333222 222345566666666666666667777788999999999999999999988877
Q ss_pred -HHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH-hhcccCCCCC
Q psy10821 125 -LSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS-TFLPETWNMV 169 (200)
Q Consensus 125 -i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~lpet~~~~ 169 (200)
++..+.+... +.++.|....+.+++.+++...+.. +.++..+++.
T Consensus 359 ~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 359 QIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred HHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 7777666666 5788887878888887777655554 4466555433
No 150
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.19 E-value=0.00022 Score=61.54 Aligned_cols=119 Identities=18% Similarity=0.144 Sum_probs=83.9
Q ss_pred CCCeeeEEEEEecc--cchhHHHHHhH----hhhhhhcc-c-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHh
Q psy10821 42 DDGKFESCRMFDAF--TNKTMTCHSWV----YDKTYYKT-S-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRN 113 (200)
Q Consensus 42 ~~G~~~~~~l~Dr~--GRr~~~~~~~~----~~~~~~~~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~ 113 (200)
.||+++++++.||. |||......+. .+...+-. + .+........+..+++..+..-.......|.-|.+.-+
T Consensus 302 l~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaG 381 (448)
T COG2271 302 LPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAG 381 (448)
T ss_pred hHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhcc
Confidence 57889999999995 88844432221 22221112 2 22344455566667788888888899999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 114 TGLGVGSMCARL-SAALTPLIG-L-MDSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 114 tg~~l~~~~~~i-~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
++.|+.-..+.+ |...+.... . .+.++|...|+++.+.++++.+...
T Consensus 382 tA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 382 TATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred chhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999997 666666666 3 4567899888888777777655443
No 151
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.18 E-value=0.001 Score=56.65 Aligned_cols=114 Identities=10% Similarity=-0.035 Sum_probs=70.5
Q ss_pred eeeEEEEEecccchhHHHHHhHhh---hhhhc--c----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccch-hHHhH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYD---KTYYK--T----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT-VLRNT 114 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~---~~~~~--~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt-~vR~t 114 (200)
....+.+.||+|+|+....+.... ..... . ............+..+..+...+.......+..+. +.|++
T Consensus 261 ~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 340 (390)
T TIGR02718 261 CGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGT 340 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHH
Confidence 344567889999987654332211 01000 0 11112222222333444555666667777777766 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHH
Q psy10821 115 GLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGIL 158 (200)
Q Consensus 115 g~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~ 158 (200)
..++.+....+++.++|.+. +.+..+....+...+++.+++.+.
T Consensus 341 ~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 341 DVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 456667767777666666655443
No 152
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.18 E-value=0.00077 Score=54.76 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=64.2
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh-----hhcc----ccchHHHHHHH-HHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT-----YYKT----SRTMEYILYIV-FFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
..++.++||+|.+..+..+.+.... .... .....|..... ++.+......+........+.||. .|++.
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~v 132 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTV 132 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCce
Confidence 4458899999999765533222111 1111 11223333322 223333333445556667799995 79999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHH-HHHHHHHHhhc
Q psy10821 116 LGVGSMCARLSAALTPLIG-LMDSFDKRIPTTIFATI-TLMSGILSTFL 162 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~-~~~~~i~~~~l 162 (200)
.|+.-....+++.+-..+. ...+.+....+.+.+.. .+++.+...++
T Consensus 133 vgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 133 VGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred ehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 9999999888887777776 33333433334444443 33344444554
No 153
>KOG2504|consensus
Probab=97.14 E-value=0.00063 Score=60.78 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=85.2
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhhhcc----ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTYYKT----SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
++.+.+.||+|.|.+.+.+..+....... +.-....+...++.+++.+..+.+....++ .|-.+.|+.+.|++..
T Consensus 99 pl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~ 177 (509)
T KOG2504|consen 99 PLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVS 177 (509)
T ss_pred cHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhc
Confidence 45567889999998777654444333322 222333455566666777777777777777 6667889999999999
Q ss_pred HHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 122 CARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 122 ~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
...+|..+.|.+. ++++.+|+..+.+.+.+.+-..++...+
T Consensus 178 GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 178 GTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred cCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 9999988888777 5889999999999988887777776665
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.09 E-value=0.00059 Score=59.78 Aligned_cols=81 Identities=10% Similarity=0.160 Sum_probs=59.7
Q ss_pred chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhhc-CchHHHHHHHHHHH
Q psy10821 77 TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSF-DKRIPTTIFATITL 153 (200)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~-~~~~~~~~~~~~~~ 153 (200)
+.+......++.++..+........+..|.+|.+.|+++.++......+++.++|.+. . .+.. ++...+++.+++.+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVV 411 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHH
Confidence 3444444555556666677778889999999999999999999999999999999988 3 4444 36666666666555
Q ss_pred HHHH
Q psy10821 154 MSGI 157 (200)
Q Consensus 154 ~~~i 157 (200)
++.+
T Consensus 412 i~~~ 415 (455)
T TIGR00892 412 SAGL 415 (455)
T ss_pred HHHH
Confidence 5444
No 155
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.07 E-value=0.0055 Score=52.18 Aligned_cols=104 Identities=5% Similarity=0.017 Sum_probs=63.8
Q ss_pred eeEEEEEecccchhHH----HHHh-HhhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMT----CHSW-VYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
++.+.+.||+||+... ..+. .+.........+.+.+.....+...+.+...+....+..| +.+.|++..|...
T Consensus 57 ~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~~~~~~~g~~~ 134 (382)
T TIGR00902 57 LFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQKQFGLDYGKVR 134 (382)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHHHcCCCccHHH
Confidence 4456788999985322 2111 1111111123344444444444445555455555566554 2577899999999
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTTIFATI 151 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~ 151 (200)
..+.++..++|.+. +.+..+|+..+......
T Consensus 135 ~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 135 LIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 99999999999887 46777888877766554
No 156
>PRK11462 putative transporter; Provisional
Probab=97.03 E-value=0.019 Score=50.55 Aligned_cols=55 Identities=7% Similarity=-0.092 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhccccc-hhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 80 YILYIVFFGKFCIAGSFAVIYNYSAELFP-TVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~sElfP-t~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
|.....++...+......+..++.+|+-+ .+.|.+..++-...+.+++.+++.+.
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555666666777889999888 99999999999988888877776665
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.01 E-value=0.0006 Score=58.25 Aligned_cols=116 Identities=16% Similarity=0.019 Sum_probs=61.4
Q ss_pred CeeeEEEEEecccchhHHHHHhH---hhhhh---hccccc----hHH-HHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV---YDKTY---YKTSRT----MEY-ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~---~~~~~~----~~~-~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
+.+..+.+.||+|||+.+..... ..... ...... ..+ .....++..+..+...+....+..|.- +.|
T Consensus 54 ~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~ 131 (396)
T TIGR00882 54 FQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNS 131 (396)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhc
Confidence 34566889999999976653211 11111 001110 011 111122222333333333344444432 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhh
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
+...+.....+.++..++|.+. ...+.+++.+++..+.+.++..+..+.
T Consensus 132 ~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 132 NFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred ccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHH
Confidence 3455666677778888888887 455678888888887777776655554
No 158
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.00 E-value=0.0049 Score=51.08 Aligned_cols=87 Identities=8% Similarity=-0.070 Sum_probs=59.7
Q ss_pred EEEEEecccchhHHHHHhHhhhh---hhcccc-chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKT---YYKTSR-TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA 123 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~ 123 (200)
.+.+.||+|||.....+...... ...... +........++.+++.....+....+..|..|++.|++..|+.....
T Consensus 267 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (365)
T TIGR00900 267 LGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLS 346 (365)
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 35667888888665533221111 111122 23333444555566667777788899999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10821 124 RLSAALTPLIG 134 (200)
Q Consensus 124 ~i~~~~~p~i~ 134 (200)
.+++.++|.+.
T Consensus 347 ~~~~~~g~~~~ 357 (365)
T TIGR00900 347 HAAWPLGLILA 357 (365)
T ss_pred HHHHHHHHHHH
Confidence 99999988887
No 159
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=96.90 E-value=0.0031 Score=52.95 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=53.2
Q ss_pred eeeEEEEEecccchhHHHHHhHhhh---hhhcc---cc-chH-HHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDK---TYYKT---SR-TME-YILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~---~~~~~---~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
.++.+.+.||+|||+....+..... ..... .. ... .......+.++...........+..|.+| +.|+++.
T Consensus 259 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~ 337 (385)
T TIGR00710 259 GFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTAS 337 (385)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHH
Confidence 3445678899999865543221111 11110 11 112 22223334455566677777888899998 5799999
Q ss_pred HHHHHHHHH-HHHHHHHHHHH
Q psy10821 117 GVGSMCARL-SAALTPLIGLM 136 (200)
Q Consensus 117 ~l~~~~~~i-~~~~~p~i~~~ 136 (200)
++....... ++..+|.+...
T Consensus 338 ~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 998888774 55556655533
No 160
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=96.87 E-value=0.0031 Score=53.12 Aligned_cols=89 Identities=11% Similarity=0.035 Sum_probs=47.2
Q ss_pred eeEEEEEecccchhHHHHHhHhh---hhhh-c--c-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYD---KTYY-K--T-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~---~~~~-~--~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
...+.+.||+|||+....+.... .... . . ............+..............+..|..| +.|+++.++
T Consensus 248 ~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 326 (377)
T PRK11102 248 IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSL 326 (377)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHH
Confidence 33467789999997554332211 1111 0 1 1111222222222222333344445567788888 899999998
Q ss_pred HHHHHH-HHHHHHHHHHH
Q psy10821 119 GSMCAR-LSAALTPLIGL 135 (200)
Q Consensus 119 ~~~~~~-i~~~~~p~i~~ 135 (200)
...... +++.+++++..
T Consensus 327 ~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 777655 56666666553
No 161
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.84 E-value=0.0009 Score=55.75 Aligned_cols=58 Identities=28% Similarity=0.258 Sum_probs=44.0
Q ss_pred HHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCch
Q psy10821 85 VFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKR 142 (200)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~ 142 (200)
.+..+++..+.....+.+.+|.+|++.|+++.|+......+++.++|.+. +.+..++.
T Consensus 317 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 317 LFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred HHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 33334444455566678899999999999999999999999999999887 34555543
No 162
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.84 E-value=0.0019 Score=62.47 Aligned_cols=90 Identities=9% Similarity=-0.004 Sum_probs=58.0
Q ss_pred eeeEEEEEecccchhHHHHHhHh---hhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVY---DKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSM 121 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~ 121 (200)
.++.+.+.||+++|.....+.+. .........+........++.+++.+........++.|..|.+.|+++.|+...
T Consensus 286 ~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~ 365 (1146)
T PRK08633 286 SLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNF 365 (1146)
T ss_pred HHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHH
Confidence 34456777888877544322221 111111222333344444555566666677788999999999999999999998
Q ss_pred HHHHHHHHHHHHH
Q psy10821 122 CARLSAALTPLIG 134 (200)
Q Consensus 122 ~~~i~~~~~p~i~ 134 (200)
+..+++.+++.+.
T Consensus 366 ~~~lg~~~~~~~~ 378 (1146)
T PRK08633 366 LQNVGMLLFLALT 378 (1146)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777666665
No 163
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.83 E-value=0.021 Score=49.48 Aligned_cols=54 Identities=31% Similarity=0.396 Sum_probs=42.9
Q ss_pred HHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHH-HHHHHHHHHH--HHhhcCch
Q psy10821 89 KFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCAR-LSAALTPLIG--LMDSFDKR 142 (200)
Q Consensus 89 ~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~-i~~~~~p~i~--~~~~~~~~ 142 (200)
+...+..+.....|+.|..|.+.|+++.++...... +++.++.++. +.++.+..
T Consensus 312 G~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 312 GLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred hHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 444556667778999999999999999999998877 8888888888 45555544
No 164
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.81 E-value=0.00081 Score=58.74 Aligned_cols=85 Identities=12% Similarity=0.098 Sum_probs=55.7
Q ss_pred HHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhhc--C-chHHHHHHHHHHHHHHHHH
Q psy10821 85 VFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSF--D-KRIPTTIFATITLMSGILS 159 (200)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~--~-~~~~~~~~~~~~~~~~i~~ 159 (200)
..+..++.............|..|. .+++..++....+.+++.++|.+. . .+.. + +...+.+.++..+++.+..
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 368 LTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 3333344444445555566677775 899999999999999999999888 3 3322 2 5566777777777776666
Q ss_pred hhcccCCCCCc
Q psy10821 160 TFLPETWNMVC 170 (200)
Q Consensus 160 ~~lpet~~~~l 170 (200)
.+.++.+.++.
T Consensus 447 ~~~~~~~~~~w 457 (465)
T TIGR00894 447 LIFGSAERQDW 457 (465)
T ss_pred eeeecceecCC
Confidence 55554444433
No 165
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.80 E-value=0.014 Score=49.66 Aligned_cols=117 Identities=10% Similarity=-0.008 Sum_probs=61.4
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh---hhc-cccchHHHHHHHHHHHHHHhhhhh-hHHHhhccccchhHHhHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT---YYK-TSRTMEYILYIVFFGKFCIAGSFA-VIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~sElfPt~vR~tg~~l 118 (200)
|.+..+.+.||+|||+....+...... ... ...+.+......++..+...+... .......+.+|.+.++.+.
T Consensus 251 g~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 328 (382)
T PRK10091 251 GNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG-- 328 (382)
T ss_pred HhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--
Confidence 456678999999998765533222111 111 122222222222222222222222 2234555666766666553
Q ss_pred HHHHHHHHHHHHHHHH-H-Hhh-cCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 119 GSMCARLSAALTPLIG-L-MDS-FDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~-~-~~~-~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
......++..++|.+. . .+. .++...+.+.++.+++...+..+.
T Consensus 329 ~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 329 GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 3445568888999988 3 443 456666666666666655544443
No 166
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.76 E-value=0.0027 Score=54.79 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=77.5
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh-----hhccc-----cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT-----YYKTS-----RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
+.++.+.||+|.++.+...+..... ....+ .+........+...++.....+..+-.++.+||.+. +..
T Consensus 272 p~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~-G~v 350 (417)
T COG2223 272 PLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKET-GAV 350 (417)
T ss_pred hccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhh-hHH
Confidence 5679999999988665543332211 11111 122233444445556677778888999999998844 567
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhcC-chHHHHHHHHHHHHHHHHHhhc
Q psy10821 116 LGVGSMCARLSAALTPLIG--LMDSFD-KRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~--~~~~~~-~~~~~~~~~~~~~~~~i~~~~l 162 (200)
.|+....+.+||+..|... ..+..+ ....+.++....+++.+..+..
T Consensus 351 ~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 351 TGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999998 355555 5567777777777777765554
No 167
>PRK09669 putative symporter YagG; Provisional
Probab=96.71 E-value=0.12 Score=44.96 Aligned_cols=122 Identities=7% Similarity=-0.063 Sum_probs=64.9
Q ss_pred CeeeEEEEEec----ccch-hHHHHHh---Hhhh-hhhccc-----cchHHHHHHHHHHHHHHhhhhhhHHHhhcccc-c
Q psy10821 44 GKFESCRMFDA----FTNK-TMTCHSW---VYDK-TYYKTS-----RTMEYILYIVFFGKFCIAGSFAVIYNYSAELF-P 108 (200)
Q Consensus 44 G~~~~~~l~Dr----~GRr-~~~~~~~---~~~~-~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElf-P 108 (200)
..++.+.+.|| +||| +.+..+. .... ..+..+ ....+.....++..........+..++.+|+. +
T Consensus 61 ~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~ 140 (444)
T PRK09669 61 TDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITND 140 (444)
T ss_pred ccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC
Confidence 45778999999 7775 3332211 1111 111111 11223333333334444455556678899988 6
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHH--HHh-------hcCchHHHHHHHHHHHHHHHHHhh-cccC
Q psy10821 109 TVLRNTGLGVGSMCARLSAALTPLIG--LMD-------SFDKRIPTTIFATITLMSGILSTF-LPET 165 (200)
Q Consensus 109 t~vR~tg~~l~~~~~~i~~~~~p~i~--~~~-------~~~~~~~~~~~~~~~~~~~i~~~~-lpet 165 (200)
.+.|.+..++....+.+++.+++.+. +.. +.++...+.++++++++..+..++ .+|.
T Consensus 141 ~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 141 PRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 68899888888887777777666544 111 123334455555555554443333 3553
No 168
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.67 E-value=0.012 Score=51.86 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=75.2
Q ss_pred eeEEEEEeccc-----chhHHHHHhHhh-hhhh--cc-ccc-hHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHH
Q psy10821 46 FESCRMFDAFT-----NKTMTCHSWVYD-KTYY--KT-SRT-MEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTG 115 (200)
Q Consensus 46 ~~~~~l~Dr~G-----Rr~~~~~~~~~~-~~~~--~~-~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg 115 (200)
++.+.+.||++ ||+.+..++... .... .. ..+ ........++..++.+......-.+..|..+ +.+..+
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 45688999997 565444333322 1111 11 122 2223334555666777777788899999998 555443
Q ss_pred ---HHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 116 ---LGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 116 ---~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
.++.+..-.+|..+++.+. +.+..+|...+++.+++.++..+...++||.+
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 3444554447777787777 35566888888888888777766667778864
No 169
>PRK10054 putative transporter; Provisional
Probab=96.59 E-value=0.025 Score=48.55 Aligned_cols=108 Identities=12% Similarity=0.046 Sum_probs=64.3
Q ss_pred EEEecccchhHHHHHhHhhhh---hhccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHH
Q psy10821 50 RMFDAFTNKTMTCHSWVYDKT---YYKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARL 125 (200)
Q Consensus 50 ~l~Dr~GRr~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i 125 (200)
.+.||.+||.....+...... ..... .+.+.......+.+++.....+....++.|.-|++.|++..+. ++.+.+
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~-~~~~~~ 344 (395)
T PRK10054 266 RRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSA-QSLGWL 344 (395)
T ss_pred HHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhH-HHHHHH
Confidence 446888888765543322111 11111 2222233344444555555566677889999999999998875 346668
Q ss_pred HHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHH
Q psy10821 126 SAALTPLIG--LMDSFDKRIPTTIFATITLMSGIL 158 (200)
Q Consensus 126 ~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~ 158 (200)
+..++|.+. +.+..+....+.+.+....+..+.
T Consensus 345 G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 999999998 456666555555554444444333
No 170
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.58 E-value=0.088 Score=44.83 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=69.1
Q ss_pred EEEEEecccchhHHHH---HhHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhH-HHhhcc----ccchhHHhHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCH---SWVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVI-YNYSAE----LFPTVLRNTGLGVG 119 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~sE----lfPt~vR~tg~~l~ 119 (200)
.+.+.||+|||+..+. .+..... ....++...++...+++++..+..+++. .-++.| =||.+..+.-.+..
T Consensus 89 ~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~ 167 (354)
T PF05631_consen 89 VGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLA 167 (354)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 3678899999976543 2222222 2335667777888888888777666653 334444 45555544444433
Q ss_pred HHHH-HHHHHHHHHHH----HHhhcCchHHHHHHHHHHHHHHHHHhh-cccCCCC
Q psy10821 120 SMCA-RLSAALTPLIG----LMDSFDKRIPTTIFATITLMSGILSTF-LPETWNM 168 (200)
Q Consensus 120 ~~~~-~i~~~~~p~i~----~~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~~~ 168 (200)
...+ .+.++.+..+. -....+...||.....+.+++.+++.. .+|..+.
T Consensus 168 tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 168 TFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 3222 23333333343 223345678888888877777766654 4775443
No 171
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.57 E-value=0.0063 Score=52.13 Aligned_cols=118 Identities=11% Similarity=0.033 Sum_probs=65.3
Q ss_pred CeeeEEEEEecccchhHHHHHhHh---hhhhh---cc-ccchHHHHHHH----HHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVY---DKTYY---KT-SRTMEYILYIV----FFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~---~~~~~---~~-~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
|..+++.+.||+|||+........ ..... .. ..+.+...... +...+...........+..|.+|.+.+
T Consensus 262 g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 341 (402)
T PRK11902 262 GALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY 341 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH
Confidence 444557778999988655422211 11111 11 12222222222 223344556677778899999998776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
+...+ ...+++...+.+. +.+..++...+...+++++++.++....+.+
T Consensus 342 ~~~~~----~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 342 ALLSA----LASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54222 2223333222233 4677888888888888888877777666544
No 172
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.54 E-value=0.0018 Score=56.10 Aligned_cols=126 Identities=14% Similarity=0.098 Sum_probs=91.3
Q ss_pred CCeeeEEEEEecccchhHHHHHhH---hhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWV---YDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+|..+.+++-||+|-|++...+.+ +............-.....++.+.+.++.++..=.|.+++.|.+.-++..|+-
T Consensus 303 lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgly 382 (438)
T COG2270 303 LGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLY 382 (438)
T ss_pred HHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehh
Confidence 366777888899999976654332 22222222233334556667778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHh--hcCchHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy10821 120 SMCARLSAALTPLIG-LMD--SFDKRIPTTIFATITLMSGILSTFLPETWNM 168 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~-~~~--~~~~~~~~~~~~~~~~~~~i~~~~lpet~~~ 168 (200)
...++..++++|+.. ... ..+.+..+....++-.++.+...+.|+.+++
T Consensus 383 altgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 383 ALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCCCc
Confidence 999999999999999 332 2335566666677777777777777655443
No 173
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.51 E-value=0.0011 Score=55.56 Aligned_cols=80 Identities=5% Similarity=-0.022 Sum_probs=51.9
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhh-----hhcc-c--------cchHHHHHHHHHHHHHHhhhhhhHHHhhccccch
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKT-----YYKT-S--------RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT 109 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~-----~~~~-~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt 109 (200)
|.++++.+.||+|||+....+...... .... . .+........++..+.....++....+..|.+|+
T Consensus 261 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 340 (356)
T TIGR00901 261 GGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP 340 (356)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 445567888999988654422221111 1111 1 1222334444455677788899999999999999
Q ss_pred hHHhHHHHHHHHHH
Q psy10821 110 VLRNTGLGVGSMCA 123 (200)
Q Consensus 110 ~vR~tg~~l~~~~~ 123 (200)
+.|++..|+.+...
T Consensus 341 ~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 341 KFGATQMALLSSLS 354 (356)
T ss_pred CccHHHHHHHHHHH
Confidence 99999999987654
No 174
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.48 E-value=0.078 Score=47.13 Aligned_cols=121 Identities=17% Similarity=0.066 Sum_probs=72.5
Q ss_pred eEEEEEecccchhHHHHHhH-----hhhhhh-ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH--------
Q psy10821 47 ESCRMFDAFTNKTMTCHSWV-----YDKTYY-KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR-------- 112 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR-------- 112 (200)
+-+.+.|+-|+|+-+..... ...... ....+..+...+.++...+.........++++|+-+.+-+
T Consensus 89 ~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~ 168 (477)
T PF11700_consen 89 FLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPS 168 (477)
T ss_pred HHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhh
Confidence 34677899888854432211 111111 2233333345555556667777777788999999999988
Q ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHH--HhhcC--------chHHHHHHHHHHHH-HHHHHhhcc
Q psy10821 113 ------------------NTGLGVGSMCARLSAALTPLIGL--MDSFD--------KRIPTTIFATITLM-SGILSTFLP 163 (200)
Q Consensus 113 ------------------~tg~~l~~~~~~i~~~~~p~i~~--~~~~~--------~~~~~~~~~~~~~~-~~i~~~~lp 163 (200)
++-.+..+..|.+|+.+.-.+.+ ....+ .+..+.+.++.-++ +....+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~ 248 (477)
T PF11700_consen 169 ANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLP 248 (477)
T ss_pred ccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999998888777662 11111 23334444443333 444455567
Q ss_pred cCCC
Q psy10821 164 ETWN 167 (200)
Q Consensus 164 et~~ 167 (200)
|.++
T Consensus 249 ~~~~ 252 (477)
T PF11700_consen 249 DRPG 252 (477)
T ss_pred CCCC
Confidence 7654
No 175
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.48 E-value=0.0047 Score=53.84 Aligned_cols=90 Identities=11% Similarity=0.100 Sum_probs=59.1
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhh---hhc--c--ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKT---YYK--T--SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~--~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
.++++.+.||+|||+....+...... ... . ..+........++.+++.+..+........|..|.+.|+++.+
T Consensus 308 ~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 308 SPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 34557788999999766543322211 111 1 1222333444445556666666666777778899999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10821 118 VGSMCARLSAALTPLIG 134 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~ 134 (200)
+......+++.+++.+.
T Consensus 388 ~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998888888888776
No 176
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.45 E-value=0.0063 Score=50.75 Aligned_cols=100 Identities=13% Similarity=0.197 Sum_probs=61.8
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.+++..+.||+|+|+++..+....... ...... .......++.+++.+..++.......|.+|.+. +++.++ .
T Consensus 194 Gr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-~~asai-~ 270 (310)
T TIGR01272 194 GRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG-YVAMWFVLALGLFNSIMFPTIFSLALNALGRHT-SQGSGI-L 270 (310)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hhhHHH-H
Confidence 3455567789999876554332222111 111111 222334445678888999999999999888753 455555 3
Q ss_pred HHHHHHHHHHHHHH--HHhhcCchHHHH
Q psy10821 121 MCARLSAALTPLIG--LMDSFDKRIPTT 146 (200)
Q Consensus 121 ~~~~i~~~~~p~i~--~~~~~~~~~~~~ 146 (200)
..+.+|+.+.|.+. ..+..+....++
T Consensus 271 ~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 271 CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 66778999999877 456667655554
No 177
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.43 E-value=0.017 Score=51.92 Aligned_cols=93 Identities=17% Similarity=0.129 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHH
Q psy10821 75 SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATIT 152 (200)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~ 152 (200)
..+.+......++.+++.........+..-+.-|.++|++..|+...+...+..++.++. +.+..+....+.+.++..
T Consensus 304 ~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~l 383 (524)
T PF05977_consen 304 SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAAL 383 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 333344444555556666667777788899999999999999999888877777777777 456677776666666555
Q ss_pred HHHHHHHhh--cccCCC
Q psy10821 153 LMSGILSTF--LPETWN 167 (200)
Q Consensus 153 ~~~~i~~~~--lpet~~ 167 (200)
+++.++... +|+.+.
T Consensus 384 ll~~~~~~~~~l~~~~~ 400 (524)
T PF05977_consen 384 LLSALIALRFPLRQGEE 400 (524)
T ss_pred HHHHHHHHHhcCccccc
Confidence 555544433 454443
No 178
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.011 Score=50.92 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=64.4
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh----hhcc--ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT----YYKT--SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
..++++.+|+|+|.-...++..... .... ..+....+...++...+..........|++.+.|.+.-+.=+++.
T Consensus 66 lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~ 145 (422)
T COG0738 66 LPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLA 145 (422)
T ss_pred ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHH
Confidence 3457888999999665544432222 1111 233444455556666677777888889999999999889999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy10821 120 SMCARLSAALTPLIG 134 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~ 134 (200)
...+.+|+.++|.+.
T Consensus 146 q~fn~lGa~~gp~~g 160 (422)
T COG0738 146 QAFNGLGAILGPLLG 160 (422)
T ss_pred HHhhhhHHHHHHHHH
Confidence 999999999999988
No 179
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=96.38 E-value=0.013 Score=48.27 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=58.7
Q ss_pred eEEEEEecccchhHHHH---HhHhhhhhhcc---ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCH---SWVYDKTYYKT---SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
..+.+.||+|+|+.... ........... ..+..+.....++.+++.+..++....+..|.+|++.|++..|+..
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 341 (352)
T PF07690_consen 262 LAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFN 341 (352)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 44677799988643321 11111111111 2233455555556666777788899999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy10821 121 MCARLSAALTP 131 (200)
Q Consensus 121 ~~~~i~~~~~p 131 (200)
....+++.++|
T Consensus 342 ~~~~~~~~igP 352 (352)
T PF07690_consen 342 SIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 99999998887
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.14 E-value=0.014 Score=49.91 Aligned_cols=88 Identities=11% Similarity=-0.022 Sum_probs=49.2
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---hh--h---ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---TY--Y---KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLG 117 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~~--~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~ 117 (200)
+..+.+.||+|||+....+..... .. . ....+..+.....++.+++.....+......... +.+.|++..+
T Consensus 269 ~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~ 347 (406)
T PRK15402 269 LTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSA 347 (406)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHH
Confidence 444677799999865543322111 10 0 1122233333334444444444444443333333 3388999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10821 118 VGSMCARLSAALTPLIG 134 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~ 134 (200)
+......++..+++.+.
T Consensus 348 ~~~~~~~~~~~~g~~~~ 364 (406)
T PRK15402 348 AMGMLSMLIFTVGIELS 364 (406)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99888888888888777
No 181
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.13 E-value=0.23 Score=43.74 Aligned_cols=90 Identities=6% Similarity=-0.050 Sum_probs=51.1
Q ss_pred eeeEEEEEe----cccch-hHHHHHhHhhhh----hhccc--cc---hHHHHHHHHHHHHHHhhhhhhHHHhhcccc-ch
Q psy10821 45 KFESCRMFD----AFTNK-TMTCHSWVYDKT----YYKTS--RT---MEYILYIVFFGKFCIAGSFAVIYNYSAELF-PT 109 (200)
Q Consensus 45 ~~~~~~l~D----r~GRr-~~~~~~~~~~~~----~~~~~--~~---~~~~~~~~~l~~~~~~~~~~~~~~~~sElf-Pt 109 (200)
.++.+.+.| |+||| +.+..+...... .+... +. ..+.....++...+......+..++.+|+- +.
T Consensus 59 dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~ 138 (473)
T PRK10429 59 DPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK 138 (473)
T ss_pred hchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH
Confidence 466789999 56995 333222111111 11111 11 122333333444555666667778899998 69
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 110 VLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 110 ~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
+.|.+..++....+.+++.+.+.+.
T Consensus 139 ~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 139 REREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887666666655554443
No 182
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.11 E-value=0.0033 Score=55.44 Aligned_cols=118 Identities=11% Similarity=0.025 Sum_probs=79.4
Q ss_pred eeEEEEEecc-cchhHHHHH-hHhhhh--hhccc--cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH--HhHHHH
Q psy10821 46 FESCRMFDAF-TNKTMTCHS-WVYDKT--YYKTS--RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL--RNTGLG 117 (200)
Q Consensus 46 ~~~~~l~Dr~-GRr~~~~~~-~~~~~~--~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v--R~tg~~ 117 (200)
.+++++.||+ |+|+..+.+ .++... ....+ .....+.....+...+.+..=+....+++|+||.+. |-.+.+
T Consensus 79 i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt 158 (498)
T COG3104 79 IIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFT 158 (498)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCcc
Confidence 4568999995 888655533 222221 11122 223344333344445566666677889999998532 778888
Q ss_pred HHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhcc
Q psy10821 118 VGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFLP 163 (200)
Q Consensus 118 l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~lp 163 (200)
+-|...++|+.++|++. ..++.++...|...++-...+++..+..+
T Consensus 159 ~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 159 LFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred EEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88999999999999999 46778888888888887777777666543
No 183
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.99 E-value=0.044 Score=48.36 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcC-----chH---HHHHHHHH
Q psy10821 82 LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFD-----KRI---PTTIFATI 151 (200)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~-----~~~---~~~~~~~~ 151 (200)
.....+..+.....+.+...+++|+-|.+.+++..++...+..++..+++.+. +.+..+ .+. ...+..+.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~ 434 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA 434 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence 33344455555666777799999999999999999999999999988888765 233333 222 22233334
Q ss_pred HHHHHHHHhhccc
Q psy10821 152 TLMSGILSTFLPE 164 (200)
Q Consensus 152 ~~~~~i~~~~lpe 164 (200)
.++.....+++|+
T Consensus 435 ~l~~l~~~~llP~ 447 (468)
T TIGR00788 435 PLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHhCCC
Confidence 4444445556786
No 184
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=95.96 E-value=0.15 Score=43.34 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=62.1
Q ss_pred EEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~ 124 (200)
.+.+.||+|+|+.+..+...... .....++.+......++.++...........+..|. |.+.+++..++......
T Consensus 260 ~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 338 (382)
T PRK11128 260 SNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAM 338 (382)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHH
Confidence 34677899998765543332221 111233334444444455555555566667777887 45556888887766655
Q ss_pred -HHHHHHHHHH-H-HhhcCchHHHHHHHHHHHHHHH
Q psy10821 125 -LSAALTPLIG-L-MDSFDKRIPTTIFATITLMSGI 157 (200)
Q Consensus 125 -i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~~~i 157 (200)
++..++|.+. . .+..+. ..++..+++.+.+++
T Consensus 339 ~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 339 GGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 5667888888 3 455554 455555555544443
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=95.92 E-value=0.04 Score=47.35 Aligned_cols=73 Identities=16% Similarity=0.108 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhhc---C-chHHHHHHHHHHHHHHHH
Q psy10821 86 FFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-L-MDSF---D-KRIPTTIFATITLMSGIL 158 (200)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~---~-~~~~~~~~~~~~~~~~i~ 158 (200)
.+.........+....+..|..|.+.|++..|+......++..++|.+. . .+.. + ...++...++++++..+.
T Consensus 305 ~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 305 CLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 3334444455566678899999999999999998777778999999888 3 3332 2 234444445555555444
No 186
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.77 E-value=0.029 Score=48.13 Aligned_cols=122 Identities=7% Similarity=-0.096 Sum_probs=66.4
Q ss_pred EEEEecccchhHHHHHhHhhhhh--hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH-HhHHHHHHHHHHHH
Q psy10821 49 CRMFDAFTNKTMTCHSWVYDKTY--YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL-RNTGLGVGSMCARL 125 (200)
Q Consensus 49 ~~l~Dr~GRr~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v-R~tg~~l~~~~~~i 125 (200)
..+.||.++|++...+....... .....+..+.....++.+++.............|.-|.+. |+++.++.+....+
T Consensus 262 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~ 341 (393)
T PRK11195 262 ARLVTLETVLRVLPAGILMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL 341 (393)
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH
Confidence 45567777775544333222111 1112222223333334445555545556666778766665 79999998888888
Q ss_pred HHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHH--hhcccCCCCCc
Q psy10821 126 SAALTPLIG-LMDSFDKRIPTTIFATITLMSGILS--TFLPETWNMVC 170 (200)
Q Consensus 126 ~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~--~~lpet~~~~l 170 (200)
+..++..+. .....+....+.+.+...+.++... +...|..++..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK11195 342 AMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLWRWHRRNQRQF 389 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 887777776 5667776666555444444444333 33344444433
No 187
>PRK11043 putative transporter; Provisional
Probab=95.63 E-value=0.031 Score=47.65 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=35.5
Q ss_pred HHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 85 VFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
..+..+..+..++.......|.+| +.|+++.|+...++..++..++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666666677778887 4799999999988877777777766
No 188
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=95.63 E-value=0.021 Score=49.55 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=23.3
Q ss_pred HHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhcccCC
Q psy10821 125 LSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFLPETW 166 (200)
Q Consensus 125 i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet~ 166 (200)
++..++|.+. .......+.+++..++..++..+..+++||++
T Consensus 141 lG~~ig~~l~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~e~~ 183 (418)
T TIGR00889 141 IGFIAAMWAVSLLDIELSNIQLYITAGSSALLGVFALTLPDIP 183 (418)
T ss_pred HHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4455555555 23222234466666666666665666678763
No 189
>KOG0252|consensus
Probab=95.61 E-value=0.0014 Score=57.32 Aligned_cols=125 Identities=18% Similarity=0.085 Sum_probs=76.0
Q ss_pred CCeeeEEEEEecccchhHHHHH---hHhhh----hhhcc-c--cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHS---WVYDK----TYYKT-S--RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR 112 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~---~~~~~----~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR 112 (200)
.|.+..+++-||+|||.+.... .+++. ..... + ....|+.+.+.+.+++.++=++...+.++|.--.+-|
T Consensus 99 ~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~R 178 (538)
T KOG0252|consen 99 FGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTR 178 (538)
T ss_pred HHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccc
Confidence 4667789999999999543211 11221 11111 1 2345677778888899999999999999999999999
Q ss_pred hHHHHHHHHHH---HHHHHHHHHHH-H-Hh----h--------cCchHHHHHHHHHHHHHHHHHhhcccCCC
Q psy10821 113 NTGLGVGSMCA---RLSAALTPLIG-L-MD----S--------FDKRIPTTIFATITLMSGILSTFLPETWN 167 (200)
Q Consensus 113 ~tg~~l~~~~~---~i~~~~~p~i~-~-~~----~--------~~~~~~~~~~~~~~~~~~i~~~~lpet~~ 167 (200)
++-.+...++. .+.|++...+. . .+ . .-|+..+.+.++.++.....-+..|||+.
T Consensus 179 Ga~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~ 250 (538)
T KOG0252|consen 179 GAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETAR 250 (538)
T ss_pred cceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchh
Confidence 99888775553 33333333333 1 11 1 11333444444444444444445699864
No 190
>PRK09669 putative symporter YagG; Provisional
Probab=95.55 E-value=0.048 Score=47.41 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=52.3
Q ss_pred eeEEEEEecccchhHHHHHhHhhh---h-hhcc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH-----H--h
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDK---T-YYKT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL-----R--N 113 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v-----R--~ 113 (200)
++...+.||+|||+....+..... . .... ..+........++.++.........+...+|..+.+. | +
T Consensus 282 ~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g 361 (444)
T PRK09669 282 LLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDG 361 (444)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcch
Confidence 344578899999976553322111 1 1111 2233334444555667777788889999999987332 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy10821 114 TGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~ 134 (200)
...|.......++..++|.+.
T Consensus 362 ~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 362 LVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344555555567777777766
No 191
>KOG3762|consensus
Probab=95.48 E-value=0.0037 Score=55.77 Aligned_cols=118 Identities=21% Similarity=0.231 Sum_probs=84.3
Q ss_pred CCeeeEEEEEecccchhHHHHHhHhhh--hhhcc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWVYDK--TYYKT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+-++.+..++.|+|+-++++.+++.-. +.+.. -.++|..+-+-++-++..+..|..+-.|++..-|++.|.++.++.
T Consensus 421 ~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~ 500 (618)
T KOG3762|consen 421 LFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLL 500 (618)
T ss_pred HHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHH
Confidence 334555677788898766654433221 11111 234455566778888899999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 120 SMCAR-LSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 120 ~~~~~-i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
...-- +|-+++.++. .....+....|.++++.+++.++...
T Consensus 501 ~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 501 QGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 88865 6777777777 35667777788888887777665443
No 192
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.45 E-value=0.24 Score=42.90 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=47.0
Q ss_pred HHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHH
Q psy10821 85 VFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIP 144 (200)
Q Consensus 85 ~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~ 144 (200)
+.+.+...........++.+|.-|.+.|++..++.+.+--++-+++..+. ++++++....
T Consensus 96 F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL 157 (403)
T PF03209_consen 96 FLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERL 157 (403)
T ss_pred HHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 33345556667777889999999999999999999999888888888887 4666654443
No 193
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=95.41 E-value=0.009 Score=49.93 Aligned_cols=82 Identities=7% Similarity=0.046 Sum_probs=50.0
Q ss_pred CeeeEEEEEecccchhHHHHHhH---hhh--hhhcccc--chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV---YDK--TYYKTSR--TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~---~~~--~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
|.++.+.+.||+|||+....... ... ....... +.........+..+..+...+..+.+.+|++| +.|++..
T Consensus 277 ~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~ 355 (366)
T TIGR00886 277 ARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVS 355 (366)
T ss_pred HhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHH
Confidence 45667889999999754432221 111 1111121 22223333444445555666778888999998 6999999
Q ss_pred HHHHHHHHHH
Q psy10821 117 GVGSMCARLS 126 (200)
Q Consensus 117 ~l~~~~~~i~ 126 (200)
|+...+++++
T Consensus 356 g~~~~~~~~g 365 (366)
T TIGR00886 356 GLVGAIGNLG 365 (366)
T ss_pred HHHHHhccCC
Confidence 9998887764
No 194
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=95.29 E-value=0.021 Score=50.52 Aligned_cols=90 Identities=10% Similarity=-0.042 Sum_probs=59.5
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhhh-----hcc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKTY-----YKT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
.++.+.+.||+|||+....+....... ... ..+........++.+++.+...........+..|.+.|+.+.++
T Consensus 312 ~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 312 GPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAI 391 (495)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHH
Confidence 345567889999997665443322111 111 12222334445555666666777777888889999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy10821 119 GSMCARLSAALTPLIG 134 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~ 134 (200)
......+++.+++.+.
T Consensus 392 ~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 392 ETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888778877777666
No 195
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=95.17 E-value=0.21 Score=43.27 Aligned_cols=118 Identities=13% Similarity=0.127 Sum_probs=74.1
Q ss_pred CCeeeEEEEEecccchhHHHHHhH---hhhhhhccccchHH-HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 43 DGKFESCRMFDAFTNKTMTCHSWV---YDKTYYKTSRTMEY-ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 43 ~G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
.|+.+++.+.|| +.|..+..... .....+....+..+ ......+.++.............+| .-++.+..+.++
T Consensus 262 ~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl 339 (394)
T COG2814 262 IGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSL 339 (394)
T ss_pred HHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHH
Confidence 367888999999 66654443211 11111222222223 2333333444444444445566666 567889999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 119 GSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 119 ~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
....-+++...+..+. ..++.+.....+..+++.+++.++.+..
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888888888877 4666888888888888888877776654
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=94.94 E-value=0.037 Score=47.00 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=13.4
Q ss_pred eeEEEEEecccchhHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHS 64 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~ 64 (200)
...+.+.||+|||+....+
T Consensus 257 ~~~~~l~~r~g~~~~~~~~ 275 (392)
T PRK10473 257 FSTPFALGIFKPRTLMLTS 275 (392)
T ss_pred HHHHHHHHhcCHHHHHHHH
Confidence 3446778999999766543
No 197
>PRK10133 L-fucose transporter; Provisional
Probab=94.94 E-value=0.05 Score=47.55 Aligned_cols=99 Identities=7% Similarity=0.037 Sum_probs=58.1
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+.++.+.||+|||+....+...... ........ +......+.+++.+..++.......|.+|.+ -+++.++.. +
T Consensus 313 ~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~ 389 (438)
T PRK10133 313 FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-M 389 (438)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-H
Confidence 4457788999998665433221111 11112222 2344455667888999999999999999875 456666664 3
Q ss_pred HHHHHHHHHHHH-H-HhhcC-chHHHHH
Q psy10821 123 ARLSAALTPLIG-L-MDSFD-KRIPTTI 147 (200)
Q Consensus 123 ~~i~~~~~p~i~-~-~~~~~-~~~~~~~ 147 (200)
..+++.+.|.+. . .+..+ ....+.+
T Consensus 390 ~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 390 TIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred HhccchHHHHHHHHHHHhccchHHHHHH
Confidence 445666666555 3 44444 3444443
No 198
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=94.90 E-value=0.05 Score=47.11 Aligned_cols=88 Identities=9% Similarity=0.092 Sum_probs=59.0
Q ss_pred CeeeEEEEEecccchhHHHHHhHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
|.++++.+.||+++|+++.......... .....+. .......+.+++.+..++..+....+..+.+.+..+..+..
T Consensus 285 GR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~ 363 (410)
T TIGR00885 285 SRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM 363 (410)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Confidence 3455677789999987654333222211 1112222 23455555667888888999999999999988776777666
Q ss_pred HHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG 134 (200)
Q Consensus 121 ~~~~i~~~~~p~i~ 134 (200)
.+ +|+.+.|.+.
T Consensus 364 ~~--~Gga~~p~l~ 375 (410)
T TIGR00885 364 AI--IGGGIVPPLQ 375 (410)
T ss_pred HH--hccchHHHHH
Confidence 55 8888888888
No 199
>PRK09848 glucuronide transporter; Provisional
Probab=94.85 E-value=0.51 Score=40.99 Aligned_cols=87 Identities=10% Similarity=0.053 Sum_probs=51.3
Q ss_pred EEEEEecccchhHHHHHhHhhhh---hh-ccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchh-------HHhHH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYDKT---YY-KTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTV-------LRNTG 115 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~-------vR~tg 115 (200)
...+.||+|+|+....+...... .. ... .+.+......++.+++.....+......+|.-|.+ .++..
T Consensus 284 ~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~ 363 (448)
T PRK09848 284 VPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLT 363 (448)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHH
Confidence 34567889988665543322211 11 111 22233333344556667777778888888888754 34666
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10821 116 LGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 116 ~~l~~~~~~i~~~~~p~i~ 134 (200)
.|+......++..+++.+.
T Consensus 364 ~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 364 YSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7776666667777777766
No 200
>KOG4686|consensus
Probab=94.80 E-value=0.076 Score=44.43 Aligned_cols=88 Identities=15% Similarity=0.033 Sum_probs=55.0
Q ss_pred eeeEEEEEecccchhHHHHHhHhhhhh----hccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHH
Q psy10821 45 KFESCRMFDAFTNKTMTCHSWVYDKTY----YKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGS 120 (200)
Q Consensus 45 ~~~~~~l~Dr~GRr~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~ 120 (200)
+++.+.++||.||+..+.......... ...+.-.++. ...+.+...+......|..++-+-|-+.-+|+.++.+
T Consensus 317 spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~--~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~q 394 (459)
T KOG4686|consen 317 SPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYT--SMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQ 394 (459)
T ss_pred hhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHH--HHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHH
Confidence 466788999999995544322211110 0111111221 2222233333334446777788888899999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy10821 121 MCARLSAALTPLIG 134 (200)
Q Consensus 121 ~~~~i~~~~~p~i~ 134 (200)
.+.+++-.+.|.++
T Consensus 395 sIqNLgla~i~Iia 408 (459)
T KOG4686|consen 395 SIQNLGLAFIPIIA 408 (459)
T ss_pred HHHhhhhhHHhhhh
Confidence 99999999999998
No 201
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=94.66 E-value=0.4 Score=42.38 Aligned_cols=85 Identities=12% Similarity=0.107 Sum_probs=64.9
Q ss_pred cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHHH--HhhcCchHHHHHHHHHHH
Q psy10821 76 RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIGL--MDSFDKRIPTTIFATITL 153 (200)
Q Consensus 76 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~~--~~~~~~~~~~~~~~~~~~ 153 (200)
.+.+|++...++.+++.....+....+.+|.-|.+.|++.+|+......++..+++.+.. ....++...+...++.++
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTL 458 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHH
Confidence 356777888888888999999999999999999999999999999888888888877773 233345555555666555
Q ss_pred HHHHHHh
Q psy10821 154 MSGILST 160 (200)
Q Consensus 154 ~~~i~~~ 160 (200)
+..+..+
T Consensus 459 ~~~~~~~ 465 (475)
T TIGR00924 459 LVGVVMA 465 (475)
T ss_pred HHHHHHH
Confidence 5544443
No 202
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.59 E-value=0.41 Score=42.11 Aligned_cols=87 Identities=7% Similarity=0.049 Sum_probs=52.5
Q ss_pred EEEEEecccchhHHHHHhHhh---hhhh-----ccccchHHHHHHHHHHHHHHhhhhhhHHHhhccc-----cchhHHhH
Q psy10821 48 SCRMFDAFTNKTMTCHSWVYD---KTYY-----KTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAEL-----FPTVLRNT 114 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sEl-----fPt~vR~t 114 (200)
...+.||+|||+....+.... .... ....+....+...++.++..+..+...+.+++|. +++..|..
T Consensus 286 ~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 286 FPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 356778999997654322211 1111 1122233334444455566777778889999999 66778877
Q ss_pred HHHHHHHH--HHHHHHHHHHHH
Q psy10821 115 GLGVGSMC--ARLSAALTPLIG 134 (200)
Q Consensus 115 g~~l~~~~--~~i~~~~~p~i~ 134 (200)
|..++... ..++..+++.+.
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 77666554 347777777766
No 203
>KOG2504|consensus
Probab=94.58 E-value=0.044 Score=49.08 Aligned_cols=122 Identities=13% Similarity=0.082 Sum_probs=86.7
Q ss_pred CCCeeeEEEEEecccchh--HHHHHhHhhhh---hhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHH
Q psy10821 42 DDGKFESCRMFDAFTNKT--MTCHSWVYDKT---YYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGL 116 (200)
Q Consensus 42 ~~G~~~~~~l~Dr~GRr~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~ 116 (200)
..|.++.+++.|+...+. +...+.+...+ ......+...+....++.+++.+...+.....+.|+.+++.=..+.
T Consensus 347 i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~ 426 (509)
T KOG2504|consen 347 IIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAY 426 (509)
T ss_pred hhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHH
Confidence 457788899999988432 22222222222 2222344445556666667777778888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-H-HhhcC-chHHHHHHHHHHHHHHHHHhhcc
Q psy10821 117 GVGSMCARLSAALTPLIG-L-MDSFD-KRIPTTIFATITLMSGILSTFLP 163 (200)
Q Consensus 117 ~l~~~~~~i~~~~~p~i~-~-~~~~~-~~~~~~~~~~~~~~~~i~~~~lp 163 (200)
|+...+..++..++|-+. . .+..+ +...++..++..+++.++.+..|
T Consensus 427 Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 427 GLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999988888 3 44444 66778888888888887777666
No 204
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=94.16 E-value=0.63 Score=39.46 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 81 ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
.....++..++.....+....+..|.+| +.|++..++......+++.+++.+.
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555566677778888889998 5789998888888889999988887
No 205
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=94.06 E-value=0.2 Score=43.00 Aligned_cols=75 Identities=11% Similarity=0.090 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHH
Q psy10821 81 ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSG 156 (200)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~ 156 (200)
.....++.++...........++.+..|.+ +++..+.......++..++|.+. +.+..+....+...+.+.++..
T Consensus 308 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 308 ATGVAIIWGLTFALVPVGWSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 333444445555555666666777777744 44555555556667888888888 4555666666666555544433
No 206
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=93.78 E-value=0.45 Score=42.38 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHH
Q psy10821 78 MEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLI 133 (200)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i 133 (200)
.+|.+...++.+++.....+....++.+.-|.+.|++.+|+-.....+++.++..+
T Consensus 382 ~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 382 VNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44777778888888888899999999999999999999997654444444444333
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=93.76 E-value=0.11 Score=50.59 Aligned_cols=54 Identities=9% Similarity=-0.075 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 81 ILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
..+..++.+++.+........++.|..|.+.|++..|+...+..++..+++.+.
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 337 ILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIIL 390 (1140)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHH
Confidence 334444555666666777889999999999999999999999888888888877
No 208
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.56 E-value=1.2 Score=34.62 Aligned_cols=91 Identities=16% Similarity=0.269 Sum_probs=56.8
Q ss_pred CeeeEEEEEecccchhHHHHHhH---hhhhhhcccc--chHHHHHHHHHHHHHHhhhhhhHHHhhccccch-hHHhHHHH
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV---YDKTYYKTSR--TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT-VLRNTGLG 117 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt-~vR~tg~~ 117 (200)
+.+..+.+.||+|||.....+.. .......... ............++..+...+....+.+|.+|. +.|+...+
T Consensus 55 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (338)
T COG0477 55 GSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVG 134 (338)
T ss_pred HhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHH
Confidence 34678999999999955543332 1111111111 233344444445556667778889999999998 67888888
Q ss_pred HHHHH-HHHHHHHHHHHH
Q psy10821 118 VGSMC-ARLSAALTPLIG 134 (200)
Q Consensus 118 l~~~~-~~i~~~~~p~i~ 134 (200)
..... ..++..++|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~ 152 (338)
T COG0477 135 LVTLGAGALGLALGPLLA 152 (338)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 77774 446666676554
No 209
>KOG2563|consensus
Probab=93.52 E-value=0.28 Score=43.20 Aligned_cols=88 Identities=19% Similarity=0.153 Sum_probs=47.6
Q ss_pred eeEEEEEecccchhHHHHHhHhhhh----hhccc----cchHHHHHHHHHHHHHHhhhhh----hHHHhhccccchhHHh
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKT----YYKTS----RTMEYILYIVFFGKFCIAGSFA----VIYNYSAELFPTVLRN 113 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~l~~~~~~~~~~----~~~~~~sElfPt~vR~ 113 (200)
+.++++.||+|-|.....+...-.+ -...+ .+..+. -+...+....+..+. ...-+.+-.||++.|+
T Consensus 97 f~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra 175 (480)
T KOG2563|consen 97 FAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRA 175 (480)
T ss_pred hHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchh-hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhh
Confidence 5678999999999655432221111 11111 111221 122223333333322 2334555689999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy10821 114 TGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~ 134 (200)
++..++...+-+|..++-++-
T Consensus 176 ~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 176 IATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred hhhhHHHhcchHHHHHHhhcc
Confidence 999999888666655544444
No 210
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=93.02 E-value=0.17 Score=42.25 Aligned_cols=49 Identities=16% Similarity=0.108 Sum_probs=35.1
Q ss_pred HHHHHHHhhhhhhHHHhhc-cccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 86 FFGKFCIAGSFAVIYNYSA-ELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 86 ~l~~~~~~~~~~~~~~~~s-ElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
.+.+++.+..++....... +..+++.|++..++....+.+++.++|.+.
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~ 342 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV 342 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555554 455678889999999988888888999887
No 211
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=91.44 E-value=1.2 Score=39.78 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhccccchhHH--hHHHHHHHHHHHHHHHHHHHHH-H---HhhcCchHHHHHHHHHH
Q psy10821 79 EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLR--NTGLGVGSMCARLSAALTPLIG-L---MDSFDKRIPTTIFATIT 152 (200)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR--~tg~~l~~~~~~i~~~~~p~i~-~---~~~~~~~~~~~~~~~~~ 152 (200)
...+......++..+..++.++++++|.-|.+-| +.-+|+.+..-.+...+..+.. . ....+....+.+.++..
T Consensus 381 ~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~ 460 (477)
T TIGR01301 381 ASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAA 460 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHH
Confidence 3445555566777788889999999999996655 5566666655555555544433 2 22223444566666677
Q ss_pred HHHHHHHhh-cccCCC
Q psy10821 153 LMSGILSTF-LPETWN 167 (200)
Q Consensus 153 ~~~~i~~~~-lpet~~ 167 (200)
+++++..++ +|+++.
T Consensus 461 ~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 461 FVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHhCCCCCC
Confidence 777776655 687754
No 212
>PF13347 MFS_2: MFS/sugar transport protein
Probab=91.20 E-value=0.61 Score=40.30 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=57.6
Q ss_pred eeEEEEEecccchhHHHHHhHhhhhh----hccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhH-----H--h
Q psy10821 46 FESCRMFDAFTNKTMTCHSWVYDKTY----YKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVL-----R--N 113 (200)
Q Consensus 46 ~~~~~l~Dr~GRr~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~v-----R--~ 113 (200)
++...+.||+|||+....+....... .... .+.++......+.+++.+..+...+.+.+|..+... | +
T Consensus 278 ~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g 357 (428)
T PF13347_consen 278 PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREG 357 (428)
T ss_pred HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchH
Confidence 44467789999997665433322211 1112 456666777777888888889999999999998542 3 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy10821 114 TGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~ 134 (200)
.-.|+.....+++..+++.+.
T Consensus 358 ~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 358 MYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred HHHHhhhhhhHHHHHHHHHHH
Confidence 444554555557777766655
No 213
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=91.08 E-value=0.84 Score=40.59 Aligned_cols=58 Identities=17% Similarity=0.093 Sum_probs=45.6
Q ss_pred chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 77 TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
+.+|++...++.+++.....++...+..+.-|.+.++.++|+-.....+++.++..+.
T Consensus 378 s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 378 SPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666777778888888888899999999999999999998866666666655554
No 214
>PRK11462 putative transporter; Provisional
Probab=90.96 E-value=0.62 Score=40.96 Aligned_cols=91 Identities=10% Similarity=0.016 Sum_probs=46.1
Q ss_pred CeeeEEEEEecccchhHHHHHhH---h-hhhhhccccc-hHHHHHHHHHHHHHHhhhhhhHHHhhccccc-----hhHHh
Q psy10821 44 GKFESCRMFDAFTNKTMTCHSWV---Y-DKTYYKTSRT-MEYILYIVFFGKFCIAGSFAVIYNYSAELFP-----TVLRN 113 (200)
Q Consensus 44 G~~~~~~l~Dr~GRr~~~~~~~~---~-~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~sElfP-----t~vR~ 113 (200)
|.+++..+.||+|+|........ . .......... ........++.+++........+...+|.-. +..|.
T Consensus 279 g~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~ 358 (460)
T PRK11462 279 GSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRL 358 (460)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCc
Confidence 33456778899999866442111 1 1111111221 1122222233344444445555666666555 66787
Q ss_pred HHHHHHH--HHHHHHHHHHHHHH
Q psy10821 114 TGLGVGS--MCARLSAALTPLIG 134 (200)
Q Consensus 114 tg~~l~~--~~~~i~~~~~p~i~ 134 (200)
.|..++. ...+++..+++.+.
T Consensus 359 ~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 359 TGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 7775554 44557766666655
No 215
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=90.63 E-value=2.3 Score=37.18 Aligned_cols=126 Identities=19% Similarity=0.168 Sum_probs=72.9
Q ss_pred eeeecCCCCeeeEEEEEecc---c--chhHHHHHhHhhhh---hh-ccc---cchHHHHHHHHHHHHHHhhhhhhHHHhh
Q psy10821 36 TWIHKKDDGKFESCRMFDAF---T--NKTMTCHSWVYDKT---YY-KTS---RTMEYILYIVFFGKFCIAGSFAVIYNYS 103 (200)
Q Consensus 36 ~~~p~~~~G~~~~~~l~Dr~---G--Rr~~~~~~~~~~~~---~~-~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 103 (200)
.++|.. -.++-+.+.|-+ | ||+-+..++..... .. ..+ .+........++..++.....-..=+..
T Consensus 34 ~~lPw~--~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~v 111 (433)
T PF03092_consen 34 ASLPWS--IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALV 111 (433)
T ss_pred HhCchH--HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 445543 335557777764 3 44433333333311 11 111 1223334444455566666666666677
Q ss_pred cccc---chhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHHhhc-cc
Q psy10821 104 AELF---PTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILSTFL-PE 164 (200)
Q Consensus 104 sElf---Pt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~~~l-pe 164 (200)
+|.- |.+ |+.-.+..+..-.+|+.++..+. ..+..+....+.+.+.+..+..+..+++ +|
T Consensus 112 vE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 112 VELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 7754 555 78888888887778888887776 4566667777777777766666555554 54
No 216
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.33 E-value=1.3 Score=33.39 Aligned_cols=87 Identities=9% Similarity=-0.115 Sum_probs=60.3
Q ss_pred EEEEEecccchhHHHHH-hHhhhhhhc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHS-WVYDKTYYK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARL 125 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i 125 (200)
+..+++++|.|..+..+ ..+...... ...+.+.+.....+.++..+..|.....|+.|.-..+.|++-.++...+...
T Consensus 57 ~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~ 136 (156)
T PF05978_consen 57 APSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQS 136 (156)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHH
Confidence 34567899999776643 333322111 2333445566677788888999999999999999999999998888777665
Q ss_pred HHHHHHHHH
Q psy10821 126 SAALTPLIG 134 (200)
Q Consensus 126 ~~~~~p~i~ 134 (200)
+.+.+..+.
T Consensus 137 s~i~G~~~~ 145 (156)
T PF05978_consen 137 SLIFGNLFL 145 (156)
T ss_pred HHHHHHHHH
Confidence 555555444
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=90.15 E-value=3.9 Score=36.36 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHhhccccc-hhHHhHHHHHHHHHHHHHHHHHHHHH-----HHhh----cCchHHHHH
Q psy10821 78 MEYILYIVFFGKFCIAGSFAVIYNYSAELFP-TVLRNTGLGVGSMCARLSAALTPLIG-----LMDS----FDKRIPTTI 147 (200)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~~~~~sElfP-t~vR~tg~~l~~~~~~i~~~~~p~i~-----~~~~----~~~~~~~~~ 147 (200)
..+..+...+...+.+..+-+..++.+|+-+ .+.|.+-.+.-...+.+++.+...+. ...+ .++.....+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~ 191 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV 191 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Confidence 4445555666667777777778888899766 67899999988888877766555444 2222 234444455
Q ss_pred HHHHHHHHHHHHhh-cccC
Q psy10821 148 FATITLMSGILSTF-LPET 165 (200)
Q Consensus 148 ~~~~~~~~~i~~~~-lpet 165 (200)
++++.++..+..++ .+|.
T Consensus 192 ~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 192 LGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 55555555444444 3443
No 218
>PRK09848 glucuronide transporter; Provisional
Probab=88.19 E-value=16 Score=31.57 Aligned_cols=46 Identities=13% Similarity=0.066 Sum_probs=23.1
Q ss_pred HHHHhhhhhhHHHhhccccc-hhHHhHHHHHHHHHHH-----HHHHHHHHHH
Q psy10821 89 KFCIAGSFAVIYNYSAELFP-TVLRNTGLGVGSMCAR-----LSAALTPLIG 134 (200)
Q Consensus 89 ~~~~~~~~~~~~~~~sElfP-t~vR~tg~~l~~~~~~-----i~~~~~p~i~ 134 (200)
..+.+....+......|+-+ .+.|.+..++-...+. ++..++|.+.
T Consensus 120 ~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~ 171 (448)
T PRK09848 120 GLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIK 171 (448)
T ss_pred HHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555666554 4668776555442222 3444455554
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=86.92 E-value=8 Score=35.94 Aligned_cols=77 Identities=9% Similarity=0.111 Sum_probs=53.4
Q ss_pred HHHHHHHHHhhhhhhHHHhhccccch---hHHhHHHHHHHHHHHHHHHHHHHHH-HHh-hc-------CchHHHHHHHHH
Q psy10821 84 IVFFGKFCIAGSFAVIYNYSAELFPT---VLRNTGLGVGSMCARLSAALTPLIG-LMD-SF-------DKRIPTTIFATI 151 (200)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~sElfPt---~vR~tg~~l~~~~~~i~~~~~p~i~-~~~-~~-------~~~~~~~~~~~~ 151 (200)
...++..+.++.-+...+...|.|+. +.|.+...+.|...++|+.+++.+. ... .. ++...+.+.++.
T Consensus 91 gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~ 170 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAIL 170 (654)
T ss_pred HHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHH
Confidence 34444555666667778888999974 3588999999999999999888887 332 22 355666666666
Q ss_pred HHHHHHHHh
Q psy10821 152 TLMSGILST 160 (200)
Q Consensus 152 ~~~~~i~~~ 160 (200)
.+++.++..
T Consensus 171 m~ia~lvf~ 179 (654)
T TIGR00926 171 MILALIVFM 179 (654)
T ss_pred HHHHHHHHH
Confidence 666655443
No 220
>KOG2533|consensus
Probab=84.75 E-value=0.52 Score=42.17 Aligned_cols=116 Identities=6% Similarity=-0.008 Sum_probs=65.6
Q ss_pred cceeeeeecCCC---CeeeEEEEEec----ccchhHHHHH-hHhhhhh---hccccchHHHHHHHHHHHHHHhhhhhhHH
Q psy10821 32 TEVLTWIHKKDD---GKFESCRMFDA----FTNKTMTCHS-WVYDKTY---YKTSRTMEYILYIVFFGKFCIAGSFAVIY 100 (200)
Q Consensus 32 ~~~~~~~p~~~~---G~~~~~~l~Dr----~GRr~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 100 (200)
+..+.++|.+.- |.++++.+.|| ..+|...... .++.... ..............+.+............
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL 389 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence 345667776533 45678999999 5555433322 1222111 11122223333333334444455566667
Q ss_pred HhhccccchhHHhHHHHHHHHHHH-HHHHHHHHHHH---HhhcCchHHHHH
Q psy10821 101 NYSAELFPTVLRNTGLGVGSMCAR-LSAALTPLIGL---MDSFDKRIPTTI 147 (200)
Q Consensus 101 ~~~sElfPt~vR~tg~~l~~~~~~-i~~~~~p~i~~---~~~~~~~~~~~~ 147 (200)
...++....+.|.......+..+. .++.++|.+.. ..++.+...+..
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 778888888888777777777766 78888888873 233566666533
No 221
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=82.93 E-value=6.3 Score=35.06 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=52.2
Q ss_pred EEEEecccchhHHHHHhHhhhh----hhcc-ccchHHHHHHHHHHHHHHhhhhhhHHHhhcccc-----chhHHhHHHHH
Q psy10821 49 CRMFDAFTNKTMTCHSWVYDKT----YYKT-SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELF-----PTVLRNTGLGV 118 (200)
Q Consensus 49 ~~l~Dr~GRr~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElf-----Pt~vR~tg~~l 118 (200)
-.+.+|+|+|.....+.+.... .+.. ..+....++..++..+..+..++.+|+.++|.- -|.+|..|...
T Consensus 293 p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~ 372 (467)
T COG2211 293 PRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVY 372 (467)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHH
Confidence 3455778998766533222211 1112 233444555557777888889999999999874 57888777766
Q ss_pred HHHHH--HHHHHHHHHHH
Q psy10821 119 GSMCA--RLSAALTPLIG 134 (200)
Q Consensus 119 ~~~~~--~i~~~~~p~i~ 134 (200)
+.+.. .++..++..+.
T Consensus 373 s~~tF~~K~g~ala~~~~ 390 (467)
T COG2211 373 SGMTFFRKLGLALAGFIP 390 (467)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 65443 35555544443
No 222
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=81.74 E-value=12 Score=31.79 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhccccchh---HHhHHHHHHHHHHHHHHHHHHHHH-H-HhhcCchHHHHHHHHHHHH
Q psy10821 80 YILYIVFFGKFCIAGSFAVIYNYSAELFPTV---LRNTGLGVGSMCARLSAALTPLIG-L-MDSFDKRIPTTIFATITLM 154 (200)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~---vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~~~~~~~~~~~~~~~~~ 154 (200)
.+.....+..++.++.=+....+.+|.|+.+ .|.++..+.|...++|+.+++... . .++.++...|.+.++..++
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 3444455566777788888899999999977 467788888888899999988887 3 4567788888887777777
Q ss_pred HHHHHhh
Q psy10821 155 SGILSTF 161 (200)
Q Consensus 155 ~~i~~~~ 161 (200)
+.+..+.
T Consensus 115 ~~~~f~~ 121 (372)
T PF00854_consen 115 ALIVFLS 121 (372)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 7665554
No 223
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=81.33 E-value=11 Score=33.01 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=51.7
Q ss_pred HHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcC--------chHHHHHHHHHHHHHHHHH
Q psy10821 90 FCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFD--------KRIPTTIFATITLMSGILS 159 (200)
Q Consensus 90 ~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~--------~~~~~~~~~~~~~~~~i~~ 159 (200)
+.....+-+.....+|+-|...-++..++...+.+++..++..+. +.+..+ .+...++..++.++.....
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll 409 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLL 409 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 333444455668899999999999999999999988877776666 222111 2333444555555566666
Q ss_pred hhcccCCC
Q psy10821 160 TFLPETWN 167 (200)
Q Consensus 160 ~~lpet~~ 167 (200)
.++|+.++
T Consensus 410 ~lLp~~~~ 417 (433)
T PF03092_consen 410 FLLPPQKR 417 (433)
T ss_pred HHcCCCch
Confidence 67777544
No 224
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=78.37 E-value=43 Score=28.77 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=26.5
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHH
Q psy10821 112 RNTGLGVGSMCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMS 155 (200)
Q Consensus 112 R~tg~~l~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~ 155 (200)
|+++.++.......+...++... .....+...++...++++.+.
T Consensus 345 ~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 345 KGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 67777777666665556666655 444456666666555544443
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=75.78 E-value=10 Score=33.40 Aligned_cols=88 Identities=8% Similarity=-0.043 Sum_probs=52.1
Q ss_pred eEEEEEecccchhHHHHHhHhh------hhhhccccchHHH-HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWVYD------KTYYKTSRTMEYI-LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVG 119 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~ 119 (200)
+-+.+.|+.|+|+-....+... ...+..+.+..+. +....+..............++..+.+.+--++..++.
T Consensus 77 iLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg 156 (438)
T COG2270 77 ILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLG 156 (438)
T ss_pred HhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccc
Confidence 3477889999985443222111 1111222233333 33444445555566666678888888887777888888
Q ss_pred HHHHHHHHHHHHHHH
Q psy10821 120 SMCARLSAALTPLIG 134 (200)
Q Consensus 120 ~~~~~i~~~~~p~i~ 134 (200)
+..+.+++.+.-.+.
T Consensus 157 ~~~gylgs~i~li~~ 171 (438)
T COG2270 157 WALGYLGSVILLIFV 171 (438)
T ss_pred cccccccchHHHHHH
Confidence 888887776655554
No 226
>PTZ00207 hypothetical protein; Provisional
Probab=73.24 E-value=25 Score=32.38 Aligned_cols=83 Identities=16% Similarity=0.152 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHH-HHH--HHh----hc------C---ch
Q psy10821 79 EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTP-LIG--LMD----SF------D---KR 142 (200)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p-~i~--~~~----~~------~---~~ 142 (200)
..+.+..++.+++.+..+++.....+|+|- +.=++-..+....+.++..+.. +++ ..+ +. + ..
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~ 531 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVV 531 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeH
Confidence 456677777888999999999999999999 7766666666666656555542 222 111 11 1 34
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q psy10821 143 IPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 143 ~~~~~~~~~~~~~~i~~~~l 162 (200)
.++++++.+++++.+....+
T Consensus 532 ~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 532 MPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred hHHHHHHHHHHHHHHHHhhe
Confidence 57889999998888776654
No 227
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=72.01 E-value=16 Score=31.65 Aligned_cols=13 Identities=15% Similarity=-0.072 Sum_probs=9.0
Q ss_pred eeEEEEEecccch
Q psy10821 46 FESCRMFDAFTNK 58 (200)
Q Consensus 46 ~~~~~l~Dr~GRr 58 (200)
+..+.+.||.+++
T Consensus 55 ~~~g~~aDr~~~~ 67 (400)
T PF03825_consen 55 PFWGAIADRFGSA 67 (400)
T ss_pred HHHHHHHhHhhhH
Confidence 3446789998753
No 228
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=69.37 E-value=60 Score=29.14 Aligned_cols=58 Identities=9% Similarity=-0.009 Sum_probs=46.3
Q ss_pred chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH-HHHHHHHHHHH
Q psy10821 77 TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA-RLSAALTPLIG 134 (200)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~-~i~~~~~p~i~ 134 (200)
+..|++...++..++.....++-...++++-|.+.|+..+|.-+..+ .++..++..+.
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~ 434 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIA 434 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777788888888999999999999999999999986644 46666655555
No 229
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=67.44 E-value=84 Score=27.34 Aligned_cols=127 Identities=14% Similarity=0.040 Sum_probs=74.1
Q ss_pred eeeeeecCCCC--eeeEEEEEecccchhHHHHHhHhhhh-hhccc-cchHHHHHHHHHHHHHHhhhhhhHHHhhccccch
Q psy10821 34 VLTWIHKKDDG--KFESCRMFDAFTNKTMTCHSWVYDKT-YYKTS-RTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPT 109 (200)
Q Consensus 34 ~~~~~p~~~~G--~~~~~~l~Dr~GRr~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt 109 (200)
++.++|.-.-| .+.+..+..|+|.++....+...... ...-+ .....+.....+.+...+..+...+..+=|-||.
T Consensus 51 lLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk 130 (395)
T COG2807 51 LLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK 130 (395)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc
Confidence 34445543222 33444555566666555433332222 11112 2344456666677778888888999999999998
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhh-cCchHHHHHHHHHHHHHHHHHhh
Q psy10821 110 VLRNTGLGVGSMCARLSAALTPLIG-L-MDS-FDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 110 ~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~-~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
|+=. .+++-...-.+++.+++.+. . .++ .+|+....+.+..++++++.++-
T Consensus 131 ~~~~-mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 131 RVGL-MTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred chhh-HHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhh
Confidence 8743 33333333335555555555 2 222 46888888888888888776654
No 230
>KOG2325|consensus
Probab=67.05 E-value=35 Score=30.62 Aligned_cols=88 Identities=20% Similarity=0.223 Sum_probs=51.7
Q ss_pred chHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH----HHhh----------c-Cc
Q psy10821 77 TMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG----LMDS----------F-DK 141 (200)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~----~~~~----------~-~~ 141 (200)
..++++..+++.+++ .+..+..=.|.+..--.+.|.++.+.....-.++..++|.+- .+.+ + ..
T Consensus 129 ~~y~mL~~R~l~Gvg-~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~Y 207 (488)
T KOG2325|consen 129 VKYLMLVARILTGVG-VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMY 207 (488)
T ss_pred hHHHHHHHHHHcCcC-cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEec
Confidence 344455555554433 244556668888877788888888877774444544544443 1111 1 13
Q ss_pred hHHHHHHHHHHHHHHHHHhh-cccC
Q psy10821 142 RIPTTIFATITLMSGILSTF-LPET 165 (200)
Q Consensus 142 ~~~~~~~~~~~~~~~i~~~~-lpet 165 (200)
..+.++.+++.++..+...+ ++|.
T Consensus 208 Tap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 208 TAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred chHHHHHHHHHHHHHHHHHhheeec
Confidence 45777888888887666544 4543
No 231
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=67.02 E-value=95 Score=27.76 Aligned_cols=51 Identities=2% Similarity=0.004 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhhhh-hHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 84 IVFFGKFCIAGSFA-VIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 84 ~~~l~~~~~~~~~~-~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
..+....+.....+ ..|.+++|++..+.-.+-.++....++++..+++.+.
T Consensus 134 FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 134 FYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344556666666 7899999999999999999999999999999998877
No 232
>KOG2532|consensus
Probab=63.86 E-value=22 Score=31.65 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=41.8
Q ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hhh---cCchHHHHHHHHHHHHHHHHHhh
Q psy10821 108 PTVLRNTGLGVGSMCARLSAALTPLIG-L-MDS---FDKRIPTTIFATITLMSGILSTF 161 (200)
Q Consensus 108 Pt~vR~tg~~l~~~~~~i~~~~~p~i~-~-~~~---~~~~~~~~~~~~~~~~~~i~~~~ 161 (200)
.++.=+..+|+.+.++.+.++++|.+. . ..+ ..|...|++.+++.+++.+...+
T Consensus 387 apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 387 APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 677778899999999999999999999 3 322 35777888888888887655443
No 233
>KOG4332|consensus
Probab=61.92 E-value=35 Score=28.76 Aligned_cols=105 Identities=16% Similarity=0.142 Sum_probs=53.6
Q ss_pred EEEEecccchhHH---HHHhHhhhhhhccccchHHHHHHHHHHHHHHhhhhhhH-HHhhccc-----cchhHHhHHHHHH
Q psy10821 49 CRMFDAFTNKTMT---CHSWVYDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVI-YNYSAEL-----FPTVLRNTGLGVG 119 (200)
Q Consensus 49 ~~l~Dr~GRr~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~sEl-----fPt~vR~tg~~l~ 119 (200)
+.+.||-|||+.. |..++.+... ..+.+.-.+.+...++++..+..++.. .-+++|- ||++--....+=+
T Consensus 93 gSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA 171 (454)
T KOG4332|consen 93 GSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKA 171 (454)
T ss_pred HHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHH
Confidence 4678999999643 3444444321 224444445666666666655554442 3455553 5655554444444
Q ss_pred HHHHH-HHHHHHHHHH----HHhhcCchHHHHHHHHHHHH
Q psy10821 120 SMCAR-LSAALTPLIG----LMDSFDKRIPTTIFATITLM 154 (200)
Q Consensus 120 ~~~~~-i~~~~~p~i~----~~~~~~~~~~~~~~~~~~~~ 154 (200)
...++ +.++++.+.. -....++..||-..+....+
T Consensus 172 ~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 172 VFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred HHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 44443 4444444433 23345566666554443333
No 234
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=61.10 E-value=4.7 Score=35.19 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHH
Q psy10821 80 YILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLM 154 (200)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~ 154 (200)
+.+....+.+++.+..++..+....+..|.+ .+..|....++-+||.+.|.+. ..+..+....+...-.+|.+
T Consensus 326 v~~~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 326 VALYALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4455566677888999999999999999933 3334444445567888888888 35555655555534444443
No 235
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=59.81 E-value=64 Score=27.57 Aligned_cols=30 Identities=23% Similarity=0.404 Sum_probs=22.3
Q ss_pred hhhhHHHhhccccchhHHhHHHHHHHHHHH
Q psy10821 95 SFAVIYNYSAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 95 ~~~~~~~~~sElfPt~vR~tg~~l~~~~~~ 124 (200)
.++..|.+-.-.|-..+|+.|+++.+.+.-
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~l 107 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIAL 107 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHH
Confidence 344555566667778899999999988864
No 236
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=54.18 E-value=1.5e+02 Score=26.00 Aligned_cols=118 Identities=11% Similarity=0.072 Sum_probs=53.1
Q ss_pred eEEEEEecccchhHHHHHhH---hhhhhhccccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHH
Q psy10821 47 ESCRMFDAFTNKTMTCHSWV---YDKTYYKTSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCA 123 (200)
Q Consensus 47 ~~~~l~Dr~GRr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~ 123 (200)
...++.|..|-|++++...+ ..........+..++...-++.+...+. -...+.|+=-.-|++.=-+..|.+.+..
T Consensus 60 ~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~ 138 (412)
T PF01770_consen 60 PVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAAT 138 (412)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHH
Confidence 34677899999987663222 2222222233333333322222222111 1111222222224444444555555544
Q ss_pred HHHHHHHHHHH----HHhhcCchHHHHHHHHHHHHHHHHHhhcccC
Q psy10821 124 RLSAALTPLIG----LMDSFDKRIPTTIFATITLMSGILSTFLPET 165 (200)
Q Consensus 124 ~i~~~~~p~i~----~~~~~~~~~~~~~~~~~~~~~~i~~~~lpet 165 (200)
-+|..++..+. .....+.....++-.....++.+..+++|..
T Consensus 139 l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 139 LVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44444444444 2333344444445555556667777777653
No 237
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=52.76 E-value=23 Score=31.02 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhcCchHHHHHHHHHHHHHHHHHhhc
Q psy10821 114 TGLGVGSMCARLSAALTPLIG-LMDSFDKRIPTTIFATITLMSGILSTFL 162 (200)
Q Consensus 114 tg~~l~~~~~~i~~~~~p~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~l 162 (200)
--.|=....|.++..++..+. .+-+.++...+++....+++..++....
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHc
Confidence 334555566666666666666 4445566666666555555544444443
No 238
>KOG1330|consensus
Probab=50.33 E-value=9.4 Score=34.01 Aligned_cols=53 Identities=19% Similarity=0.227 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHH-HHHHHHHHHH
Q psy10821 82 LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCAR-LSAALTPLIG 134 (200)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~-i~~~~~p~i~ 134 (200)
+.+.+++-......+++..-+..|.-|++.|.++.++...+.- ++..-.|++.
T Consensus 353 ~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~iv 406 (493)
T KOG1330|consen 353 LILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIV 406 (493)
T ss_pred HHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCccee
Confidence 3334444444555677777888999999999999999998876 5666677554
No 239
>KOG3098|consensus
Probab=46.93 E-value=30 Score=30.82 Aligned_cols=83 Identities=8% Similarity=-0.072 Sum_probs=58.1
Q ss_pred EEEEEecccchhHHHHH-hHhhhhhhc-cccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHH
Q psy10821 48 SCRMFDAFTNKTMTCHS-WVYDKTYYK-TSRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARL 125 (200)
Q Consensus 48 ~~~l~Dr~GRr~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i 125 (200)
+..++|+.|.|..+..+ ..+...... .-.+.....+...+.+++.+..|.....|.+|..+.+-+.+-.++..+++..
T Consensus 70 ~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~ 149 (461)
T KOG3098|consen 70 APSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQS 149 (461)
T ss_pred hHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHH
Confidence 34567889999777643 333333222 1234555666777777888888999999999999999999999888888765
Q ss_pred HHHHH
Q psy10821 126 SAALT 130 (200)
Q Consensus 126 ~~~~~ 130 (200)
+.+++
T Consensus 150 ~li~G 154 (461)
T KOG3098|consen 150 SLIIG 154 (461)
T ss_pred HHHhh
Confidence 44444
No 240
>KOG3098|consensus
Probab=45.62 E-value=1.4e+02 Score=26.62 Aligned_cols=43 Identities=21% Similarity=0.091 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHH
Q psy10821 82 LYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARL 125 (200)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i 125 (200)
.++.++.++.-.......+.+....+ ++.|.++.++.-.-..+
T Consensus 357 ~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~ 399 (461)
T KOG3098|consen 357 LIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV 399 (461)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH
Confidence 44555566677778888899999999 66677666665444333
No 241
>KOG2563|consensus
Probab=41.44 E-value=4.4 Score=35.88 Aligned_cols=88 Identities=15% Similarity=0.227 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH--HHhhcC----chHHHHHHHHHHHHHHH
Q psy10821 84 IVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG--LMDSFD----KRIPTTIFATITLMSGI 157 (200)
Q Consensus 84 ~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~--~~~~~~----~~~~~~~~~~~~~~~~i 157 (200)
...+.+++..+..++-.-+-.|.-=+..-++..|+....+.+.+++-.++. ..++.+ +...-+.....+++..+
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 444 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAI 444 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHH
Confidence 333445556666666667777865566667778888888888888777776 344444 34445555566666666
Q ss_pred HHhhc-ccCCCCCch
Q psy10821 158 LSTFL-PETWNMVCD 171 (200)
Q Consensus 158 ~~~~l-pet~~~~l~ 171 (200)
...+. |+-++++.+
T Consensus 445 lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 445 LVAFFRPDYRRLRAE 459 (480)
T ss_pred HHhhhhhhHHhHhhh
Confidence 65555 544444443
No 242
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=35.10 E-value=1.3e+02 Score=20.80 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=18.5
Q ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHHHHh
Q psy10821 129 LTPLIGLMDSFDKRIPTTIFATITLMSGILST 160 (200)
Q Consensus 129 ~~p~i~~~~~~~~~~~~~~~~~~~~~~~i~~~ 160 (200)
++.+..-.....|...|.+.+++-+.+.....
T Consensus 40 v~Q~~~kvialQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 40 VGQFFIKVIALQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333334455666777777777666655443
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=33.03 E-value=2.3e+02 Score=26.30 Aligned_cols=56 Identities=13% Similarity=0.133 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 79 EYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
...+...++.+++.+....+......-..|.+.-+++.++....-.+||.++.-++
T Consensus 406 ~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 406 NAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred chHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33445566666777777777777777888999989999988888778777766555
No 244
>KOG3764|consensus
Probab=30.76 E-value=92 Score=27.59 Aligned_cols=116 Identities=13% Similarity=0.080 Sum_probs=57.0
Q ss_pred CeeeEEEEEeccc--chhHHHHHhHhhhhhhcc---ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchh------HH
Q psy10821 44 GKFESCRMFDAFT--NKTMTCHSWVYDKTYYKT---SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTV------LR 112 (200)
Q Consensus 44 G~~~~~~l~Dr~G--Rr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~------vR 112 (200)
|..+.+.+.||++ |-...+.+.+........ ..+...++.-.+..++......+...-...++-..+ +=
T Consensus 322 g~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vY 401 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVY 401 (464)
T ss_pred cCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcccccee
Confidence 5666677788988 533333333322222111 112222222222233333333333333333333322 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHhhcCchHHHHHHHHHHHHHHHHH
Q psy10821 113 NTGLGVGSMCARLSAALTPLIG--LMDSFDKRIPTTIFATITLMSGILS 159 (200)
Q Consensus 113 ~tg~~l~~~~~~i~~~~~p~i~--~~~~~~~~~~~~~~~~~~~~~~i~~ 159 (200)
++..++....-.++..++|.+. ..++.+..+...+.++..++..-+.
T Consensus 402 GsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 402 GSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred eeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHH
Confidence 4445555555557777788877 4677777777666666666654433
No 245
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=28.02 E-value=1.9e+02 Score=21.27 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=17.7
Q ss_pred hccccchhHHhHHHHHHHHHHH
Q psy10821 103 SAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 103 ~sElfPt~vR~tg~~l~~~~~~ 124 (200)
+.|+||++.|....+.......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 4799999999988877766554
No 246
>PF07274 DUF1440: Protein of unknown function (DUF1440); InterPro: IPR009898 This family contains a number of bacterial proteins of unknown function approximately 180 residues long. These are possibly integral membrane proteins.
Probab=24.18 E-value=1.3e+02 Score=22.14 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=25.0
Q ss_pred HHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHH
Q psy10821 87 FGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMC 122 (200)
Q Consensus 87 l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~ 122 (200)
+..+..+..++..|.+.+|.+|.-....|..+...+
T Consensus 57 ~vH~~FSi~fa~~Y~~~ae~~p~i~l~~G~~fGi~~ 92 (135)
T PF07274_consen 57 IVHFGFSIVFAVAYCVLAEYWPKIKLWQGAAFGIVV 92 (135)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCccchhhhHHHHHHH
Confidence 344556677788889999999987666665555444
No 247
>KOG2615|consensus
Probab=23.89 E-value=2.3e+02 Score=25.04 Aligned_cols=50 Identities=22% Similarity=0.250 Sum_probs=40.9
Q ss_pred HHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH-HHhh
Q psy10821 89 KFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG-LMDS 138 (200)
Q Consensus 89 ~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~-~~~~ 138 (200)
.+..+..-+....+..-..|++-|++..|+...++.++-.++|.+. ....
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 3444455555678889999999999999999999999999999999 4433
No 248
>MTH00213 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=22.49 E-value=2.1e+02 Score=22.83 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=12.5
Q ss_pred hhHHHHHHHHHHhhcccc
Q psy10821 181 MTYMFGVFTGAVTLGSLA 198 (200)
Q Consensus 181 ~~~~~~~~~~~~~~g~~~ 198 (200)
+-..+|+++|.+.+.-|+
T Consensus 102 ~~paig~ligail~ael~ 119 (239)
T MTH00213 102 APPAIGILIGAILAAELA 119 (239)
T ss_pred CCchHHHHHHHHHHHHHH
Confidence 334778888888776554
No 249
>KOG2816|consensus
Probab=22.02 E-value=5.7e+02 Score=22.77 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHHHHHHHHHHHHHHHHHH
Q psy10821 83 YIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGVGSMCARLSAALTPLIG 134 (200)
Q Consensus 83 ~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l~~~~~~i~~~~~p~i~ 134 (200)
........+.....+..-...+-+-..+.|++..++...+-.+.++++|.+.
T Consensus 335 ~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 335 FAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred hHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHH
Confidence 3333344445556666778888899999999999999999999999988888
No 250
>KOG4686|consensus
Probab=21.31 E-value=62 Score=27.58 Aligned_cols=84 Identities=17% Similarity=0.069 Sum_probs=46.6
Q ss_pred eeEEEEEec-ccchhHHH---HHhHhhhhhhcc---ccchHHHHHHHHHHHHHHhhhhhhHHHhhccccchhHHhHHHHH
Q psy10821 46 FESCRMFDA-FTNKTMTC---HSWVYDKTYYKT---SRTMEYILYIVFFGKFCIAGSFAVIYNYSAELFPTVLRNTGLGV 118 (200)
Q Consensus 46 ~~~~~l~Dr-~GRr~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~sElfPt~vR~tg~~l 118 (200)
+.+++++|| +|-|.... .........+.. ....+......++.+++.-.....+..|..-.|.-+.-+...|+
T Consensus 97 ffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGl 176 (459)
T KOG4686|consen 97 FFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGL 176 (459)
T ss_pred eecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhH
Confidence 567899997 56553222 111111111111 22233345555555554444445566777777777777788888
Q ss_pred HHHHHHHHHHH
Q psy10821 119 GSMCARLSAAL 129 (200)
Q Consensus 119 ~~~~~~i~~~~ 129 (200)
...+.++|..+
T Consensus 177 qlSvAR~Gstv 187 (459)
T KOG4686|consen 177 QLSVARLGSTV 187 (459)
T ss_pred HHHHHHhhcee
Confidence 88887776553
No 251
>COG1593 DctQ TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]
Probab=20.71 E-value=5.4e+02 Score=22.43 Aligned_cols=92 Identities=17% Similarity=0.076 Sum_probs=50.9
Q ss_pred ccccchhHHhHHHHHHHHHHH-HHHHHHHHHHH-HhhcCchHHHHHHHHHHHHHHHHHhh-cccCCCCCchHHHHHHHhh
Q psy10821 104 AELFPTVLRNTGLGVGSMCAR-LSAALTPLIGL-MDSFDKRIPTTIFATITLMSGILSTF-LPETWNMVCDRRWMLAVAQ 180 (200)
Q Consensus 104 sElfPt~vR~tg~~l~~~~~~-i~~~~~p~i~~-~~~~~~~~~~~~~~~~~~~~~i~~~~-lpet~~~~l~~~~~~~~~~ 180 (200)
-+-+|++.|.+.--....... +-+...|.+.. -...+...+--..++.++.+.++..+ .+|-+-+++.+...|..+.
T Consensus 149 ~~~~~~~~~~s~~e~~~~~~~a~~aLllpvIIigGi~~G~fTpTEaa~iav~yal~v~~~vYr~l~~~~l~~~l~~a~~~ 228 (379)
T COG1593 149 KRGYPREERASFKERLKAAVKALWALLLPVIIIGGIRSGIFTPTEAAAIAVLYALLVGAFVYRELTLKELPKVLLEAVKT 228 (379)
T ss_pred hcCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 345666777666655555554 67777887773 33444444544455555555555533 4666656666666666555
Q ss_pred hhHHHHHHHHHHhhc
Q psy10821 181 MTYMFGVFTGAVTLG 195 (200)
Q Consensus 181 ~~~~~~~~~~~~~~g 195 (200)
+-.....+.+...+|
T Consensus 229 t~~Vm~iva~a~~f~ 243 (379)
T COG1593 229 TAVVMFIVAAAAAFA 243 (379)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444444444433
No 252
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.59 E-value=2.6e+02 Score=20.76 Aligned_cols=22 Identities=14% Similarity=0.025 Sum_probs=17.4
Q ss_pred hccccchhHHhHHHHHHHHHHH
Q psy10821 103 SAELFPTVLRNTGLGVGSMCAR 124 (200)
Q Consensus 103 ~sElfPt~vR~tg~~l~~~~~~ 124 (200)
+.|+||+..|....+.......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 4799999999988777766554
Done!