RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10822
         (257 letters)



>d1gff1_ b.121.5.1 (1:) Microvirus capsid proteins {Bacteriophage G4
           [TaxId: 10843]}
          Length = 417

 Score = 26.3 bits (58), Expect = 3.9
 Identities = 5/35 (14%), Positives = 10/35 (28%)

Query: 4   RQYECSTAAILFYTPRWLWKHWEGGKIHALMMDLD 38
             +  S  +  F      W   +  ++      LD
Sbjct: 323 EFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALD 357


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.333    0.145    0.483 

Gapped
Lambda     K      H
   0.267   0.0521    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,093,947
Number of extensions: 52886
Number of successful extensions: 212
Number of sequences better than 10.0: 1
Number of HSP's gapped: 212
Number of HSP's successfully gapped: 12
Length of query: 257
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 174
Effective length of database: 1,268,006
Effective search space: 220633044
Effective search space used: 220633044
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 52 (24.3 bits)