RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10824
(185 letters)
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 99.2 bits (246), Expect = 2e-26
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP FD R+Q+P C I ++ Q +CGSCWA A+SDR+CI T + +S++ LL
Sbjct: 2 LPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLL 61
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGS---CQRFDRGNCNC 185
TCC + GD C GG P AW + G+ +GG Y S C+ + C
Sbjct: 62 TCCGS-MCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEH 111
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 72.3 bits (176), Expect = 1e-16
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP+ D R + V+ Q +CG+CWA + AL ++ + T + S+ +L+
Sbjct: 1 LPDSVDWR----EKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSL--SAQNLV 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G C GG A+ Y+++N + D+
Sbjct: 55 DCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD 102
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 72.0 bits (175), Expect = 2e-16
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP+ D R + V+ Q CGSCWA +T AA+ I T + S L+
Sbjct: 1 LPDSIDWR----ENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISL--SEQQLV 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C A G C GG A+ +++ NG + + D +
Sbjct: 55 DCTTANHG---CRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNST 99
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 72.0 bits (175), Expect = 4e-16
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 71 DYQSNTELPEEFDLRKQ--YPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLD 128
+Y S +LP+ +D R + + + CGSCWA A+T+A++DR+ I +G
Sbjct: 27 EYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWP 86
Query: 129 HTLSSDHLLTCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
TL S + C CEGGN + W Y ++G+P + +
Sbjct: 87 STLLSVQNVIDCGNA---GSCEGGNDLSVWDYAHQHGIPDETCNNYQAKDQECDKFN 140
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 70.0 bits (170), Expect = 1e-15
Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP +D R + V+ Q++CGSC++ A+ L R+ I T LS ++
Sbjct: 1 LPTSWDWRNV-HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVV 59
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
+C G + A Y + G+ +
Sbjct: 60 SCS--QYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKE 105
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 69.6 bits (169), Expect = 1e-15
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP+ D RK + V+ Q CGSCWA + T AL +M T + S+ L
Sbjct: 1 LPKSVDWRK----KGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSL---SEQNL 53
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C+ G C GG RA+ Y+ ENG + D
Sbjct: 54 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYR 101
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 69.6 bits (169), Expect = 2e-15
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 79 PEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLLT 138
P E+D R + + V+ Q CGSCWA + T + + + L LS LL
Sbjct: 2 PPEWDWR----SKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLS--LSEQELLD 55
Query: 139 CCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C C GG P A+ + G D S Q +
Sbjct: 56 C---DKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFS 99
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 67.3 bits (163), Expect = 8e-15
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP D R + + ++ Q CG CWA + A + I T + + L+
Sbjct: 1 LPSYVDWR----SAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLS--EQELI 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENG-VPTGGDYGSCQRFDRGNCNC 185
C C GG + +++ NG + T +Y + N +
Sbjct: 55 DCGRTQN-TRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDL 102
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 67.7 bits (164), Expect = 9e-15
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 74 SNTELPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSS 133
+ P D RK+ + + + Q +CGSCW +TT AL + IAT L +
Sbjct: 5 CSATYPPSMDWRKKGNFVSPVKN---QGSCGSCWTFSTTGALESAVAIATGKMLSL--AE 59
Query: 134 DHLLTCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
L+ C C+GG P +A+ Y+ N G D + D
Sbjct: 60 QQLVDCAQNFNNHG-CQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQ 110
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 67.0 bits (162), Expect = 1e-14
Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LP D R + + ++ Q CGSCWA + AA+ I T + LS L+
Sbjct: 1 LPSFVDWR----SKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLIS--LSEQELV 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C A G C GG A+ Y++ NG
Sbjct: 55 DCDTASHG---CNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPY 99
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 66.9 bits (162), Expect = 2e-14
Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 8/107 (7%)
Query: 79 PEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLLT 138
+D R + + V+ Q NCGSCWA ++ ++ + I + LS L+
Sbjct: 19 HAAYDWR----LHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLIT--LSEQELVD 72
Query: 139 CCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G G + G+ GDY
Sbjct: 73 CSFKNYG--CNGGLINNAFEDMIELGGICPDGDYPYVSDAPNLCNID 117
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 66.5 bits (161), Expect = 2e-14
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 8/108 (7%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
+P D R + V+ Q CGSCWA +T A+ I T + S L+
Sbjct: 2 VPASVDWR----KKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSL--SEQELV 55
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C C GG A+ ++ + G T + +D
Sbjct: 56 DCDTDQNQ--GCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVS 101
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 64.3 bits (155), Expect = 1e-13
Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Query: 79 PEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLLT 138
P D R + V+ Q CGSCWA + + + +A + + + +L
Sbjct: 2 PAAVDWRA----RGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLS---EQMLV 54
Query: 139 CCAACTGGDVCEGGNPMRAWYYMLENG-VPTGGDYGSCQRFDRGNCNC 185
C G N W NG V T Y
Sbjct: 55 SCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCT 102
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 64.2 bits (155), Expect = 1e-13
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 79 PEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLLT 138
P+ D RK+ + V+ Q CGSCWA ++ AL ++ T L+ + +L+
Sbjct: 2 PDSVDYRKKGY----VTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLS--PQNLVD 55
Query: 139 CCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C + D C GG A+ Y+ +N D +
Sbjct: 56 CVSEN---DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN 99
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 63.5 bits (153), Expect = 2e-13
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LPE+ D RK+ + V+ Q +CGSCWA +T + + I T + LS L+
Sbjct: 1 LPEQIDWRKKGA----VTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLIS--LSEQELV 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G C GG + A+ Y++ NG + G C
Sbjct: 55 DCDKKNHG---CLGGAFVFAYQYIINNGGIDTQANYPYKAVQ-GPCQA 98
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 63.4 bits (153), Expect = 3e-13
Identities = 25/110 (22%), Positives = 36/110 (32%), Gaps = 9/110 (8%)
Query: 79 PEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLLT 138
P+ D R + + V+ Q CGSCWA +T A + I T L+ LS L+
Sbjct: 2 PQSIDWRAKGA----VTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLE--LSEQELVD 55
Query: 139 CCAACTG---GDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G G + P C+ D+
Sbjct: 56 CDKHSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKV 105
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 62.3 bits (150), Expect = 7e-13
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
LPE D R + V+ Q +CGSCWA + A + I T ++ LS L+
Sbjct: 1 LPENVDWR----KKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVE--LSEQELV 54
Query: 138 TCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G C+GG P A Y+ +NG+ Y +
Sbjct: 55 DCERRSHG---CKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQ 99
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 58.9 bits (141), Expect = 1e-11
Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 9/111 (8%)
Query: 78 LPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTLSSDHLL 137
+PE D R + V+ Q +CGSCWA + + + I T + S LL
Sbjct: 1 IPEYVDWR----QKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNL--NEYSEQELL 54
Query: 138 TCCAACTG---GDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
C G G + + N P G C+ ++G
Sbjct: 55 DCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAA 105
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 47.3 bits (111), Expect = 2e-07
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 7/115 (6%)
Query: 71 DYQSNTELPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHT 130
E P D R + V+ Q CGSCWA + T AL +M T +
Sbjct: 90 QEPLFYEAPRSVDWR----EKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRL--IS 143
Query: 131 LSSDHLLTCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
LS +L+ C C GG A+ Y+ +NG + + +
Sbjct: 144 LSEQNLVDCSGPQGNEG-CNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN 197
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 41.6 bits (96), Expect = 2e-05
Identities = 26/114 (22%), Positives = 34/114 (29%), Gaps = 10/114 (8%)
Query: 72 YQSNTELPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMCIATQGRLDHTL 131
N P E DLR+ +++Q CGS WA + AA L
Sbjct: 81 CSINGNAPAEIDLRQMRTVT----PIRMQGGCGSAWAFSGVAATESAYLAYRDQS--LDL 134
Query: 132 SSDHLLTCCAACTGGDVCEGGNPMRAWYYMLENGVPTGGDYGSCQRFDRGNCNC 185
+ L+ C C G R Y+ NGV Y R
Sbjct: 135 AEQELVDCA----SQHGCHGDTIPRGIEYIQHNGVVQESYYRYVAREQSCRRPN 184
>d1ig0a2 c.100.1.1 (A:3-223) Thiamin pyrophosphokinase, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 221
Score = 28.1 bits (62), Expect = 0.48
Identities = 9/81 (11%), Positives = 21/81 (25%), Gaps = 4/81 (4%)
Query: 61 DLQLGSEHFGDYQSNTELPEEFDLRKQYPNCTNIGHVQLQSNCGSCWAIATTAALSDRMC 120
D + ++ E + + I + + + + +
Sbjct: 124 DFTKCVNLISLHFNSPEFRSLISNKDNLQSNHGIELEKGIHTLYNTMTESLVFSKVTPIS 183
Query: 121 I----ATQGRLDHTLSSDHLL 137
+ GR D T+ S L
Sbjct: 184 LLALGGIGGRFDQTVHSITQL 204
>d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.5 bits (58), Expect = 1.6
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 122 ATQGRLDHTLSSDHLL 137
GR D ++S + L
Sbjct: 138 GLGGRFDQIMASVNTL 153
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.445
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 738,742
Number of extensions: 32759
Number of successful extensions: 127
Number of sequences better than 10.0: 1
Number of HSP's gapped: 109
Number of HSP's successfully gapped: 32
Length of query: 185
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 105
Effective length of database: 1,309,196
Effective search space: 137465580
Effective search space used: 137465580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.8 bits)