BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10825
(140 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|305682538|dbj|BAJ16353.1| CLOCK [Thermobia domestica]
Length = 522
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 105/123 (85%), Gaps = 6/123 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYH+DDL+ VVTCHEALMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRASPIIGYLPFEVLGTSGYDYYHIDDLEKVVTCHEALMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR--RDNNQVPDSEEQSNDTGP----GD 134
WLQTR+YITYHQWNSKPEFIVCTHRVVSY +V++ R NNQ +++ S+D P GD
Sbjct: 337 WLQTRYYITYHQWNSKPEFIVCTHRVVSYADVMKQLRKNNQDSNNKLLSSDNDPVLGNGD 396
Query: 135 SNT 137
SN+
Sbjct: 397 SNS 399
>gi|443497931|dbj|BAM76759.1| CLOCK [Gryllus bimaculatus]
Length = 594
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/117 (75%), Positives = 101/117 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ VVTCHEALMQKGEGTSC+YRFLTKGQQWI
Sbjct: 282 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLEKVVTCHEALMQKGEGTSCHYRFLTKGQQWI 341
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNT 137
WLQTRFYITYHQWNSKPEFIVCTHRVVSYV+V+++ + + ++ GD+++
Sbjct: 342 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVDVMKQLRKGTENDRSRESEVSVGDTHS 398
>gi|158294626|ref|XP_315720.4| AGAP005711-PA [Anopheles gambiae str. PEST]
gi|157015652|gb|EAA11642.4| AGAP005711-PA [Anopheles gambiae str. PEST]
Length = 1030
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 94/110 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ VV CHEALMQKGEGTSCYYRFLTKGQQWI
Sbjct: 262 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVACHEALMQKGEGTSCYYRFLTKGQQWI 321
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDT 130
WLQTRFYITYHQWNSKPEF+VCTHRVVSY +V+++ NQ + S D
Sbjct: 322 WLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQMRNQTAGDSKFSEDA 371
>gi|157132927|ref|XP_001662706.1| circadian locomoter output cycles kaput protein (dclock) (dpas1)
[Aedes aegypti]
gi|108871039|gb|EAT35264.1| AAEL012562-PA [Aedes aegypti]
Length = 900
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 96/110 (87%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ VV+CHEALMQKGEGTSC+YRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGEGTSCFYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDT 130
WLQTRFYITYHQWNSKPEF+VCTHRVVSY +V+++ NQ + S DT
Sbjct: 337 WLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQMRNQAGGEGKFSEDT 386
>gi|332021701|gb|EGI62057.1| Circadian locomoter output cycles protein kaput [Acromyrmex
echinatior]
Length = 699
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/108 (79%), Positives = 98/108 (90%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD+VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 299 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWI 358
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSN 128
WLQTRFYITY+QWNSKPEFIVCTH V+SYV+V+++ ++ D ++ N
Sbjct: 359 WLQTRFYITYNQWNSKPEFIVCTHYVISYVDVMKKLRTELGDYDKTQN 406
>gi|350423284|ref|XP_003493431.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Bombus
impatiens]
Length = 733
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPD-SEEQSND 129
WLQTRFYITY+QWNSKPEFIVCTH VVSY++V++ + ++EQS D
Sbjct: 337 WLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIKELRKESESFNKEQSQD 386
>gi|340719080|ref|XP_003397985.1| PREDICTED: hypothetical protein LOC100650446 [Bombus terrestris]
Length = 733
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPD-SEEQSND 129
WLQTRFYITY+QWNSKPEFIVCTH VVSY++V++ + ++EQS D
Sbjct: 337 WLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIKELRKESESFNKEQSQD 386
>gi|444245669|gb|AGD94516.1| clock, partial [Solenopsis invicta]
Length = 673
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 91/94 (96%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD+VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 279 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWI 338
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITY+QWNSKPEFIVCTH VVSYV+V++
Sbjct: 339 WLQTRFYITYNQWNSKPEFIVCTHYVVSYVDVMK 372
>gi|307168572|gb|EFN61630.1| Circadian locomoter output cycles protein kaput [Camponotus
floridanus]
Length = 702
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD+VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 261 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWI 320
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRR 115
WLQTRFYITY+QWNSKPEFIVCTH VVSYV+V++
Sbjct: 321 WLQTRFYITYNQWNSKPEFIVCTHYVVSYVDVMKE 355
>gi|38176144|gb|AAR13011.1| clock [Danaus plexippus]
Length = 602
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 94/109 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ VV+CHEALMQKGE TSCYYRFLTKGQQWI
Sbjct: 256 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWI 315
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSND 129
WLQTRFYITYHQWNSKPEF+VCTHRVVSY ++++ + ++EE D
Sbjct: 316 WLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESVRD 364
>gi|357614851|gb|EHJ69324.1| clock [Danaus plexippus]
Length = 602
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 94/109 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ VV+CHEALMQKGE TSCYYRFLTKGQQWI
Sbjct: 256 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEALMQKGELTSCYYRFLTKGQQWI 315
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSND 129
WLQTRFYITYHQWNSKPEF+VCTHRVVSY ++++ + ++EE D
Sbjct: 316 WLQTRFYITYHQWNSKPEFVVCTHRVVSYADIIKSTKQERTETEESVRD 364
>gi|380013056|ref|XP_003690586.1| PREDICTED: uncharacterized protein LOC100869092 [Apis florea]
Length = 726
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 90/94 (95%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITY+QWNSKPEFIVCTH VVSY++V++
Sbjct: 337 WLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIK 370
>gi|328779515|ref|XP_394233.4| PREDICTED: neuronal PAS domain-containing protein 2 [Apis
mellifera]
Length = 724
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 90/94 (95%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVTCHESLMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITY+QWNSKPEFIVCTH VVSY++V++
Sbjct: 337 WLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIK 370
>gi|307193316|gb|EFN76178.1| Circadian locomoter output cycles protein kaput [Harpegnathos
saltator]
Length = 617
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/94 (90%), Positives = 90/94 (95%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD+VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 261 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWI 320
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITY+QWNSKPEFIVCTH VVSYV V++
Sbjct: 321 WLQTRFYITYNQWNSKPEFIVCTHYVVSYVGVMK 354
>gi|383865803|ref|XP_003708362.1| PREDICTED: uncharacterized protein LOC100878984 [Megachile
rotundata]
Length = 724
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD VV CHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDKVVMCHESLMQKGEGTSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITY+QWNSKPEFIVCTH VVSY++V++
Sbjct: 337 WLQTRFYITYNQWNSKPEFIVCTHYVVSYIDVIK 370
>gi|164698400|ref|NP_001106937.1| clock [Tribolium castaneum]
gi|140270858|gb|ABO86537.1| CLOCK [Tribolium castaneum]
gi|270004792|gb|EFA01240.1| clock [Tribolium castaneum]
Length = 581
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 100/113 (88%), Gaps = 2/113 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFE+LGTSGYDYYHVDDLD+++ H+ALMQKGEGTSC+YRFLTKGQQWI
Sbjct: 249 DHRAPPIIGYLPFELLGTSGYDYYHVDDLDNIIIGHKALMQKGEGTSCFYRFLTKGQQWI 308
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPG 133
WLQTR+YITYHQWNSKPEFIVCTHRVVSYV+V+++ N+ ++ ++ T PG
Sbjct: 309 WLQTRYYITYHQWNSKPEFIVCTHRVVSYVDVMKQ--NRKEETGVTTSGTSPG 359
>gi|38232198|gb|AAR14936.1| CLOCK [Antheraea pernyi]
Length = 611
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 82/92 (89%), Positives = 86/92 (93%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ V+TCHEALMQKGE TSCYYRFLTKGQQWI
Sbjct: 258 DRRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVITCHEALMQKGELTSCYYRFLTKGQQWI 317
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQTRFYITYHQWNSKPEFIVCTHRVVSY ++
Sbjct: 318 WLQTRFYITYHQWNSKPEFIVCTHRVVSYTDM 349
>gi|339283906|gb|AEJ38222.1| clock [Spodoptera exigua]
Length = 411
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 86/94 (91%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ VVTCHEALMQKGE TSCYYRFLTKGQQWI
Sbjct: 258 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVTCHEALMQKGELTSCYYRFLTKGQQWI 317
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQTRFYITYHQWNSKPEF+VCT RVVSY ++ +
Sbjct: 318 WLQTRFYITYHQWNSKPEFVVCTRRVVSYADIAK 351
>gi|345497761|ref|XP_001599257.2| PREDICTED: circadian locomoter output cycles protein kaput-like
[Nasonia vitripennis]
Length = 728
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/111 (75%), Positives = 95/111 (85%), Gaps = 3/111 (2%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDLD VVTCHE+LM+KGEGTSCYYRFLTKGQQWI
Sbjct: 278 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLDKVVTCHESLMKKGEGTSCYYRFLTKGQQWI 337
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRDNNQVPDSEEQSN 128
WLQTRFYITY+QW+S PEFIVCTH VVSY +V LR +++ ++ SN
Sbjct: 338 WLQTRFYITYNQWHSNPEFIVCTHHVVSYTDVVKHLRIQEDEMSSTKRPSN 388
>gi|242017615|ref|XP_002429283.1| Circadian locomoter output cycles protein kaput, putative
[Pediculus humanus corporis]
gi|212514179|gb|EEB16545.1| Circadian locomoter output cycles protein kaput, putative
[Pediculus humanus corporis]
Length = 660
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 95/116 (81%), Gaps = 7/116 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGY+ EV+GTSGYDYYH+DDLD +V CHE LM+KGEGTSCYYRFLTKGQQWI
Sbjct: 262 DSRATPIIGYVQLEVVGTSGYDYYHIDDLDKIVVCHETLMEKGEGTSCYYRFLTKGQQWI 321
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRR------DNNQVPDSEEQSNDT 130
WLQTRFYI+YHQWNSKPEFIVCTHRVVSYV+V+ D+N DS+ +ND+
Sbjct: 322 WLQTRFYISYHQWNSKPEFIVCTHRVVSYVDVMNEFKKYPCDDN-TSDSKANTNDS 376
>gi|345324269|ref|XP_001507170.2| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ornithorhynchus anatinus]
Length = 830
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIAADKSQDSGSE 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|113204808|gb|ABI34137.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 746
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/121 (68%), Positives = 94/121 (77%), Gaps = 10/121 (8%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 279 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 338
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRDNNQVPDS-------EEQSNDT 130
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ V +S ++QS D+
Sbjct: 339 WLQTHYYITYHQWNSRPEFIVCTHTVVSYSEVRAEQRRELGIVEESPPEISAVDKQSQDS 398
Query: 131 G 131
G
Sbjct: 399 G 399
>gi|410920848|ref|XP_003973895.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Takifugu rubripes]
Length = 855
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 81/119 (68%), Positives = 92/119 (77%), Gaps = 8/119 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLEILAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV------PD--SEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ P+ +E+QS D+G
Sbjct: 341 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESQPEMTAEKQSQDSG 399
>gi|113204806|gb|ABI34136.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 721
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 83/121 (68%), Positives = 94/121 (77%), Gaps = 10/121 (8%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 254 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 313
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRDNNQVPDS-------EEQSNDT 130
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ V +S ++QS D+
Sbjct: 314 WLQTHYYITYHQWNSRPEFIVCTHTVVSYSEVRAEQRRELGIVEESPPEISAVDKQSQDS 373
Query: 131 G 131
G
Sbjct: 374 G 374
>gi|47219337|emb|CAG10966.1| unnamed protein product [Tetraodon nigroviridis]
Length = 885
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 82/118 (69%), Positives = 92/118 (77%), Gaps = 7/118 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 293 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLEILAKCHEHLMQYGKGKSCYYRFLTKGQQWI 352
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRR----DNNQVPDSEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR + +Q + E+S D+G
Sbjct: 353 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESQPEMTAEKSQDSG 410
>gi|348504866|ref|XP_003439982.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 871
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 8/119 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP--------DSEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ +E+QS D+G
Sbjct: 341 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESPPQITAEKQSQDSG 399
>gi|209418764|gb|ACI46597.1| clock-1a protein [Haplochromis burtoni]
Length = 864
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 8/119 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP--------DSEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ +E+QS D+G
Sbjct: 341 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESPPQITAEKQSQDSG 399
>gi|145881077|gb|ABP97104.1| Clock [Haplochromis burtoni]
Length = 872
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 8/119 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP--------DSEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ +E+QS D+G
Sbjct: 341 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESPPQITAEKQSQDSG 399
>gi|191961770|ref|NP_001122127.1| clock [Xenopus (Silurana) tropicalis]
gi|189441921|gb|AAI67652.1| clock protein [Xenopus (Silurana) tropicalis]
Length = 829
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 80/105 (76%), Positives = 87/105 (82%), Gaps = 2/105 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV--LRRDNNQVPDS 123
WLQTR+YITYHQWNS+PEFIVCTH VVSY V RR + DS
Sbjct: 341 WLQTRYYITYHQWNSRPEFIVCTHTVVSYAEVGAERRRERGIEDS 385
>gi|291401787|ref|XP_002717213.1| PREDICTED: clock [Oryctolagus cuniculus]
Length = 853
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPDS-EEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P++ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|302745166|gb|ADL62686.1| clock 1a [Phreatichthys andruzzii]
Length = 884
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 82/118 (69%), Positives = 93/118 (78%), Gaps = 7/118 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 284 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 343
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ P+ S ++S D+G
Sbjct: 344 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESAPEISADKSQDSG 401
>gi|363732683|ref|XP_420353.3| PREDICTED: neuronal PAS domain-containing protein 2-like [Gallus
gallus]
Length = 861
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 515 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 574
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL---RRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 575 WLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRAEKRRD 613
>gi|327273712|ref|XP_003221624.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Anolis carolinensis]
Length = 916
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 350 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 409
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 410 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEEALPEIAADKSQDSGSD 469
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 470 NHINTVSL 477
>gi|321468989|gb|EFX79971.1| hypothetical protein DAPPUDRAFT_346996 [Daphnia pulex]
Length = 869
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D PPIIGYLPFEVLGTSGYDYYHVDDL+ V TCHEALMQKGE TSC YRFLTKGQQWI
Sbjct: 308 DHRGPPIIGYLPFEVLGTSGYDYYHVDDLEKVSTCHEALMQKGEVTSCCYRFLTKGQQWI 367
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNT 137
WLQT++YITYHQW SKPEFIVC+HRV+SY V + + E+S D PG NT
Sbjct: 368 WLQTKYYITYHQWYSKPEFIVCSHRVISYNEVT---GHPLKIESEESCDQVPGTPNT 421
>gi|296010952|ref|NP_001083854.2| clock circadian regulator [Xenopus laevis]
gi|6984144|gb|AAF34772.1|AF227985_1 Clock [Xenopus laevis]
Length = 825
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 82/92 (89%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQTR+YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 341 WLQTRYYITYHQWNSRPEFIVCTHTVVSYAEV 372
>gi|81916241|sp|Q91YB0.1|CLOCK_SPAGA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549040|emb|CAC85403.1| clock protein [Spalax galili]
Length = 865
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +PD + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPDAAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|449273411|gb|EMC82905.1| Circadian locomoter output cycles protein kaput, partial [Columba
livia]
Length = 633
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 70 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 129
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 130 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSD 189
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 190 NHINTVSL 197
>gi|81916242|sp|Q91YB2.1|CLOCK_SPACA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549042|emb|CAC85404.1| clock protein [Spalax carmeli]
Length = 865
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +PD + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPDAAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|326924642|ref|XP_003208534.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Meleagris
gallopavo]
Length = 688
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL---RRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 350 WLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRAEKRRD 388
>gi|4903294|gb|AAD32860.1|AF144425_1 CLOCK protein [Gallus gallus]
Length = 853
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|19773562|gb|AAL98708.1|AF246959_1 CLOCK [Gallus gallus]
Length = 853
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|18858445|ref|NP_571032.1| circadian locomoter output cycles protein kaput [Danio rerio]
gi|4680719|gb|AAD27749.1|AF133306_1 transcription factor clock [Danio rerio]
Length = 893
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 80/118 (67%), Positives = 92/118 (77%), Gaps = 7/118 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV------PD-SEEQSNDTG 131
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ P+ S ++S D+G
Sbjct: 341 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESPPEISADKSQDSG 398
>gi|149035205|gb|EDL89909.1| clock homolog (mouse), isoform CRA_a [Rattus norvegicus]
Length = 863
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+S+ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|11177898|ref|NP_068628.1| circadian locomoter output cycles protein kaput [Rattus norvegicus]
gi|81917913|sp|Q9WVS9.1|CLOCK_RAT RecName: Full=Circadian locomoter output cycles protein kaput;
Short=rCLOCK
gi|5263200|dbj|BAA81819.1| CLOCK [Rattus norvegicus]
Length = 862
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+S+ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGVEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|326919172|ref|XP_003205856.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Meleagris gallopavo]
Length = 850
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGFEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|149035206|gb|EDL89910.1| clock homolog (mouse), isoform CRA_b [Rattus norvegicus]
Length = 833
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+S+ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|118572227|sp|Q8QGQ6.2|CLOCK_CHICK RecName: Full=Circadian locomoter output cycles protein kaput
Length = 875
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|124430743|ref|NP_989505.2| circadian locomoter output cycles protein kaput [Gallus gallus]
gi|5442153|gb|AAD43283.1|AF132531_1 CLOCK [Gallus gallus]
Length = 875
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|15822818|dbj|BAB68768.1| CLOCK-S [Rattus norvegicus]
Length = 832
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+S+ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLESLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGVEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|449500804|ref|XP_002195620.2| PREDICTED: circadian locomoter output cycles protein kaput
[Taeniopygia guttata]
Length = 900
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 336 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 395
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 396 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSD 455
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 456 NHINTVSL 463
>gi|326919174|ref|XP_003205857.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Meleagris gallopavo]
Length = 873
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGFEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|82206300|sp|Q6YGZ4.1|CLOCK_TYTAL RecName: Full=Circadian locomoter output cycles protein kaput
gi|37722553|gb|AAO06119.1| CLOCK [Tyto alba]
Length = 851
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEITGDKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|395843798|ref|XP_003794660.1| PREDICTED: circadian locomoter output cycles protein kaput
[Otolemur garnettii]
Length = 849
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|432845822|ref|XP_004065870.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oryzias latipes]
Length = 932
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 79/116 (68%), Positives = 88/116 (75%), Gaps = 2/116 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CHE L+Q G+G SCYYRFLTKGQQWI
Sbjct: 310 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLEMLAKCHEHLLQYGKGKSCYYRFLTKGQQWI 369
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSN 136
WLQT +YITYHQWNS+PEFIVCTH VVSY V ++ E+SN D N
Sbjct: 370 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAEQRREL--GIEESNPEANADKN 423
>gi|195588559|ref|XP_002084025.1| GD13034 [Drosophila simulans]
gi|194196034|gb|EDX09610.1| GD13034 [Drosophila simulans]
Length = 1005
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 272 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 331
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 332 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKECQKSVNSNSTTNNGSSKVI 389
>gi|6478192|gb|AAF13733.1| clock [Homo sapiens]
Length = 845
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|260833470|ref|XP_002611680.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
gi|229297051|gb|EEN67690.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
Length = 1410
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD + CHE LMQ GEGTSC YRFLTKGQQWI
Sbjct: 844 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDRISICHEQLMQCGEGTSCCYRFLTKGQQWI 903
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQTR+YITY+QWNSKPEFIVCTH VVSY V
Sbjct: 904 WLQTRYYITYNQWNSKPEFIVCTHTVVSYSEV 935
>gi|195436110|ref|XP_002066021.1| GK10694 [Drosophila willistoni]
gi|194162106|gb|EDW77007.1| GK10694 [Drosophila willistoni]
Length = 1132
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 86/97 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 278 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 337
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDN 117
WLQT +Y++YHQ+NSKP+++VCTH+VVSY V++++N
Sbjct: 338 WLQTDYYVSYHQYNSKPDYVVCTHKVVSYAEVIKQNN 374
>gi|190338076|gb|AAI62682.1| Clock3 protein [Danio rerio]
Length = 820
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 75/94 (79%), Positives = 81/94 (86%)
Query: 19 IYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQ 78
+ D APPIIGY+PFEVLGTSGYDYYHVDDL S+ CHE LMQ G+G SCYYRFLTKGQQ
Sbjct: 277 LLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCHEHLMQFGKGKSCYYRFLTKGQQ 336
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WIWLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 337 WIWLQTNYYITYHQWNSRPEFIVCTHTVVSYAEV 370
>gi|348571872|ref|XP_003471719.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cavia porcellus]
Length = 854
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|417412957|gb|JAA52836.1| Putative aryl-hydrocarbon receptor nuclear translocator, partial
[Desmodus rotundus]
Length = 860
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 291 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 350
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 351 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 410
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 411 NRINTVSL 418
>gi|62898830|dbj|BAD97269.1| clock variant [Homo sapiens]
Length = 846
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|344288390|ref|XP_003415933.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Loxodonta africana]
Length = 848
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|197097814|ref|NP_001125706.1| circadian locomoter output cycles protein kaput [Pongo abelii]
gi|75070732|sp|Q5RAK8.1|CLOCK_PONAB RecName: Full=Circadian locomoter output cycles protein kaput
gi|55728928|emb|CAH91202.1| hypothetical protein [Pongo abelii]
Length = 846
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELSIEESLPEIAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|40788216|dbj|BAA20792.2| KIAA0334 [Homo sapiens]
Length = 848
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 292 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 351
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 352 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 411
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 412 NRINTVSL 419
>gi|358412691|ref|XP_003582378.1| PREDICTED: circadian locomoter output cycles protein kaput, partial
[Bos taurus]
Length = 672
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 117 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 176
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 177 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 236
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 237 NRINTVSL 244
>gi|114594708|ref|XP_001143582.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan troglodytes]
gi|114594718|ref|XP_001144028.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
8 [Pan troglodytes]
gi|397469782|ref|XP_003806520.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Pan paniscus]
gi|397469784|ref|XP_003806521.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan paniscus]
gi|410216588|gb|JAA05513.1| clock homolog [Pan troglodytes]
gi|410266798|gb|JAA21365.1| clock homolog [Pan troglodytes]
gi|410290386|gb|JAA23793.1| clock homolog [Pan troglodytes]
gi|410333901|gb|JAA35897.1| clock homolog [Pan troglodytes]
Length = 847
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|4758010|ref|NP_004889.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|392841204|ref|NP_001254772.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|6166009|sp|O15516.1|CLOCK_HUMAN RecName: Full=Circadian locomoter output cycles protein kaput;
Short=hCLOCK; AltName: Full=Class E basic
helix-loop-helix protein 8; Short=bHLHe8
gi|2275619|gb|AAB83969.1| CLOCK [Homo sapiens]
gi|116496623|gb|AAI26160.1| Clock homolog (mouse) [Homo sapiens]
gi|116496921|gb|AAI26158.1| Clock homolog (mouse) [Homo sapiens]
gi|119625873|gb|EAX05468.1| clock homolog (mouse) [Homo sapiens]
gi|121647006|gb|ABM64208.1| CLOCK [Homo sapiens]
gi|158256848|dbj|BAF84397.1| unnamed protein product [Homo sapiens]
gi|168267306|dbj|BAG09709.1| clock homolog [synthetic construct]
gi|313883870|gb|ADR83421.1| Unknown protein [synthetic construct]
Length = 846
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|403284624|ref|XP_003933662.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Saimiri boliviensis boliviensis]
gi|403284626|ref|XP_003933663.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Saimiri boliviensis boliviensis]
Length = 845
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEAAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|359066462|ref|XP_002688303.2| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 844
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|296486572|tpg|DAA28685.1| TPA: clock-like [Bos taurus]
Length = 845
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|6466210|gb|AAF12827.1|AF203107_1 circadian rhythmicity protein CLOCK [Xenopus laevis]
Length = 778
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 76/92 (82%), Positives = 82/92 (89%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQTR+YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 341 WLQTRYYITYHQWNSRPEFIVCTHTVVSYAEV 372
>gi|296196517|ref|XP_002745868.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Callithrix jacchus]
Length = 850
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEAAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|195972809|ref|NP_001124404.1| circadian locomoter output cycles protein kaput [Ovis aries]
gi|157780889|gb|ABV71922.1| clock [Ovis aries]
Length = 845
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|410957611|ref|XP_003985419.1| PREDICTED: circadian locomoter output cycles protein kaput [Felis
catus]
Length = 843
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|440903376|gb|ELR54047.1| hypothetical protein M91_21411, partial [Bos grunniens mutus]
Length = 829
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 275 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 334
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 335 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 394
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 395 NRINTVSL 402
>gi|73909162|gb|AAH41878.1| CLOCK protein [Homo sapiens]
gi|167773569|gb|ABZ92219.1| clock homolog (mouse) [synthetic construct]
Length = 846
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|380818214|gb|AFE80981.1| circadian locomoter output cycles protein kaput [Macaca mulatta]
Length = 850
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|344235895|gb|EGV91998.1| Circadian locomoter output cycles protein kaput [Cricetulus
griseus]
Length = 599
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 25 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 84
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 85 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 144
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 145 NRINTVSL 152
>gi|345779610|ref|XP_532376.3| PREDICTED: circadian locomoter output cycles protein kaput [Canis
lupus familiaris]
Length = 846
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|332238500|ref|XP_003268437.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Nomascus leucogenys]
gi|332238502|ref|XP_003268438.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Nomascus leucogenys]
Length = 846
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|301767998|ref|XP_002919413.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ailuropoda melanoleuca]
Length = 845
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|402869776|ref|XP_003898923.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Papio anubis]
gi|402869778|ref|XP_003898924.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Papio anubis]
Length = 847
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|281340205|gb|EFB15789.1| hypothetical protein PANDA_008040 [Ailuropoda melanoleuca]
Length = 810
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 255 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 314
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 315 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 374
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 375 NRINTVSL 382
>gi|334331253|ref|XP_001370711.2| PREDICTED: circadian locomoter output cycles protein kaput
[Monodelphis domestica]
Length = 858
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIKESLPEIAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|354499225|ref|XP_003511711.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cricetulus griseus]
Length = 864
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|7106459|ref|NP_031741.1| circadian locomoter output cycles protein kaput [Mus musculus]
gi|5921794|sp|O08785.1|CLOCK_MOUSE RecName: Full=Circadian locomoter output cycles protein kaput;
Short=mCLOCK
gi|4836806|gb|AAD30565.1|AF146793_2 CLOCK [Mus musculus]
gi|2114488|gb|AAC53200.1| CLOCK [Mus musculus]
gi|148705949|gb|EDL37896.1| circadian locomoter output cycles kaput, isoform CRA_b [Mus
musculus]
gi|151556646|gb|AAI48469.1| Circadian locomoter output cycles kaput [synthetic construct]
gi|162318658|gb|AAI56742.1| Circadian locomoter output cycles kaput [synthetic construct]
Length = 855
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|355687417|gb|EHH26001.1| hypothetical protein EGK_15877, partial [Macaca mulatta]
Length = 816
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 255 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 314
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 315 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 374
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 375 NRINTVSL 382
>gi|355749398|gb|EHH53797.1| hypothetical protein EGM_14498 [Macaca fascicularis]
Length = 850
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|24660399|ref|NP_523964.2| clock, isoform A [Drosophila melanogaster]
gi|7295192|gb|AAF50516.1| clock, isoform A [Drosophila melanogaster]
Length = 1023
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 337 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 394
>gi|3192867|gb|AAD10630.1| CLOCK [Drosophila melanogaster]
Length = 1023
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 337 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 394
>gi|3213258|gb|AAC39101.1| CLOCK [Drosophila melanogaster]
Length = 1015
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 277 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 336
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 337 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 394
>gi|297292899|ref|XP_002804151.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Macaca mulatta]
Length = 823
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|3219726|gb|AAC62234.1| CLOCK [Drosophila melanogaster]
Length = 1027
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 341 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 398
>gi|62472090|ref|NP_001014576.1| clock, isoform D [Drosophila melanogaster]
gi|47117813|sp|O61735.3|CLOCK_DROME RecName: Full=Circadian locomoter output cycles protein kaput;
AltName: Full=dCLOCK; AltName: Full=dPAS1
gi|61678474|gb|AAX52753.1| clock, isoform D [Drosophila melanogaster]
Length = 1027
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 341 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 398
>gi|81916239|sp|Q91YA8.1|CLOCK_SPAJD RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549044|emb|CAC85405.1| clock protein [Spalax judaei]
Length = 865
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPDS-EEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +PD+ ++ D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPDATADKGQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NRINTVSL 417
>gi|449498961|ref|XP_002193300.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Taeniopygia guttata]
Length = 615
Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 267 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 326
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 327 WLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRAERRRD 365
>gi|37359900|dbj|BAC97928.1| mKIAA0334 protein [Mus musculus]
Length = 857
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 292 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 351
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 352 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 411
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 412 NRINTVSL 419
>gi|442630861|ref|NP_729294.2| clock, isoform G [Drosophila melanogaster]
gi|442630863|ref|NP_996021.2| clock, isoform H [Drosophila melanogaster]
gi|440215449|gb|AAN12019.2| clock, isoform G [Drosophila melanogaster]
gi|440215450|gb|AAS65057.2| clock, isoform H [Drosophila melanogaster]
Length = 895
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 149 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 208
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 209 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 266
>gi|62472069|ref|NP_001014574.1| clock, isoform F [Drosophila melanogaster]
gi|61678475|gb|AAX52754.1| clock, isoform F [Drosophila melanogaster]
Length = 961
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 215 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 274
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S ++ T G S I
Sbjct: 275 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVI 332
>gi|395542792|ref|XP_003773309.1| PREDICTED: circadian locomoter output cycles protein kaput
[Sarcophilus harrisii]
Length = 886
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 376 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 435
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 436 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIKESLPEIAADKSQDSGSD 495
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 496 NRINTVSL 503
>gi|190339127|gb|AAI63244.1| Clock protein [Danio rerio]
Length = 892
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 79/118 (66%), Positives = 91/118 (77%), Gaps = 7/118 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV------PD-SEEQSNDTG 131
WLQT +Y TYHQWNS+PEFIVCTH VVSY V ++ P+ S ++S D+G
Sbjct: 341 WLQTHYYTTYHQWNSRPEFIVCTHTVVSYAEVRAEQRRELGIEESPPEISADKSQDSG 398
>gi|251747935|gb|ABI95425.2| clock-3a protein [Haplochromis burtoni]
Length = 885
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 280 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 339
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 340 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 371
>gi|348529360|ref|XP_003452181.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 887
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 280 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 339
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 340 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 371
>gi|194209149|ref|XP_001492839.2| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Equus caballus]
gi|338723611|ref|XP_003364760.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Equus caballus]
Length = 846
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 381
>gi|426344403|ref|XP_004038759.1| PREDICTED: circadian locomoter output cycles protein kaput [Gorilla
gorilla gorilla]
Length = 817
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 381
>gi|194865385|ref|XP_001971403.1| GG14938 [Drosophila erecta]
gi|190653186|gb|EDV50429.1| GG14938 [Drosophila erecta]
Length = 1082
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 88/110 (80%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLD++V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDNIVACHEELRQTGEGKSCYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDT 130
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+ + S + S T
Sbjct: 341 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDGRKEAKKSGKSSTST 390
>gi|30231242|ref|NP_840080.1| clock homolog 3 [Danio rerio]
gi|21685552|dbj|BAC02687.1| bHLH-PAS transcription factor [Danio rerio]
Length = 813
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 81/94 (86%)
Query: 19 IYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQ 78
+ D APPIIGY+PFEVLGTSGYDYYHVDDL S+ CHE LMQ G+G SCYYRFLTKGQQ
Sbjct: 277 LLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCHEHLMQFGKGKSCYYRFLTKGQQ 336
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WIWLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 337 WIWLQTNYYITYHQWNSRPEFIVCTHTVVSYAEV 370
>gi|327281753|ref|XP_003225611.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Anolis carolinensis]
Length = 742
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 234 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 293
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 294 WLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVRAERRRD 332
>gi|444517437|gb|ELV11560.1| Neuronal PAS domain-containing protein 2, partial [Tupaia
chinensis]
Length = 444
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/109 (70%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Query: 6 PVTFCMSDLMNSTIYDLV--APPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKG 63
P C+ +LM+ D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G
Sbjct: 2 PRKNCIENLMDEDEKDRAKRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFG 61
Query: 64 EGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
+G SC YRFLTKGQQWIWLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 62 KGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 110
>gi|148705948|gb|EDL37895.1| circadian locomoter output cycles kaput, isoform CRA_a [Mus
musculus]
Length = 417
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 99/128 (77%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 175 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 234
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 235 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPETAADKSQDSGSD 294
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 295 NRINTVSL 302
>gi|6715306|gb|AAF26365.1|AF201076_1 bHLH/PAS transcription factor Clock [Gallus gallus]
Length = 852
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 97/128 (75%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD++ CHE LMQ G+G SCYYR LTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRSLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|348571967|ref|XP_003471766.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Cavia
porcellus]
Length = 832
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/104 (74%), Positives = 86/104 (82%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 272 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLAKCHQHLMQFGKGKSCCYRFLTKGQQWI 331
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL--RRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY +VL RR + + D
Sbjct: 332 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVLLERRQDLALED 375
>gi|47213557|emb|CAF91831.1| unnamed protein product [Tetraodon nigroviridis]
Length = 832
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 88/116 (75%), Gaps = 10/116 (8%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 275 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 334
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSN 136
WLQT +YITYHQWNS+PEFIVCTH VVSY V EQ + G +SN
Sbjct: 335 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV----------RAEQRRELGIEESN 380
>gi|195325819|ref|XP_002029628.1| GM24988 [Drosophila sechellia]
gi|194118571|gb|EDW40614.1| GM24988 [Drosophila sechellia]
Length = 933
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 83/94 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 187 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 246
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+
Sbjct: 247 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLK 280
>gi|301610093|ref|XP_002934591.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 753
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/99 (77%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 267 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQCGKGKSCYYRFLTKGQQWI 326
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL---RRD 116
WLQT ++ITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 327 WLQTHYFITYHQWNSKPEFIVCTHTVVSYAEVRAEKRRD 365
>gi|194749637|ref|XP_001957245.1| GF24152 [Drosophila ananassae]
gi|190624527|gb|EDV40051.1| GF24152 [Drosophila ananassae]
Length = 999
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 75/117 (64%), Positives = 86/117 (73%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 280 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 339
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNT 137
WLQT +Y+TYH +NSKPE +VCTH+VVSY VL+ + N + + T
Sbjct: 340 WLQTAYYVTYHTFNSKPEHVVCTHKVVSYAEVLKESQKERKAISSTGNSSKSASATT 396
>gi|126337226|ref|XP_001369672.1| PREDICTED: neuronal PAS domain-containing protein 2 [Monodelphis
domestica]
Length = 838
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 273 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 332
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTIK 139
WLQT +YITYHQWNSKPEFIVCTH VVSY +V ++P + S DS+T+K
Sbjct: 333 WLQTHYYITYHQWNSKPEFIVCTHTVVSYADVRVERRQELPLEDSASEVV---DSSTLK 388
>gi|283806548|ref|NP_001164531.1| clock [Acyrthosiphon pisum]
gi|283483350|emb|CAX37105.1| clock [Acyrthosiphon pisum]
Length = 613
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 86/96 (89%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D P IIGY+PFEVLGTSGY+YYH+DDL+ V+ H+ALM KGEGTSCYYRFLTKGQQWI
Sbjct: 278 DHRGPSIIGYMPFEVLGTSGYEYYHIDDLEDVILSHQALMLKGEGTSCYYRFLTKGQQWI 337
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRD 116
WLQ+R+YI+YHQWNSKPEFIVC H+V++Y NV++++
Sbjct: 338 WLQSRYYISYHQWNSKPEFIVCHHQVINYFNVIKKE 373
>gi|71896369|ref|NP_001025713.1| neuronal PAS domain-containing protein 2 [Gallus gallus]
gi|82233988|sp|Q5ZQU2.1|NPAS2_CHICK RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2; AltName: Full=Member of PAS protein
4; Short=MOP4
gi|53759154|gb|AAU93340.1| bHLH-PAS clock protein [Gallus gallus]
Length = 815
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 74/92 (80%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHMVVSYADV 356
>gi|195492665|ref|XP_002094089.1| GE20389 [Drosophila yakuba]
gi|194180190|gb|EDW93801.1| GE20389 [Drosophila yakuba]
Length = 525
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 83/94 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 187 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 246
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQT +Y++YHQ+NSKP+++VCTH+VVSY VL+
Sbjct: 247 WLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLK 280
>gi|358420903|ref|XP_003584759.1| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 508
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 381
>gi|345321809|ref|XP_001507683.2| PREDICTED: neuronal PAS domain-containing protein 2-like, partial
[Ornithorhynchus anatinus]
Length = 703
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/92 (81%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 145 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 204
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY NV
Sbjct: 205 WLQTHYYITYHQWNSKPEFIVCTHTVVSYANV 236
>gi|334350262|ref|XP_003342332.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Monodelphis domestica]
Length = 814
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 72/92 (78%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+S+ CH+ +MQ G+G SCYYRFLTKGQQWI
Sbjct: 342 DHRAPPIIGYLPFEVLGTSGYDYYHADDLESLARCHKQVMQFGKGKSCYYRFLTKGQQWI 401
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT++YITYHQWNSKPEFIVCTH VVS+ +
Sbjct: 402 WLQTQYYITYHQWNSKPEFIVCTHTVVSHAQI 433
>gi|335293550|ref|XP_003356992.1| PREDICTED: circadian locomoter output cycles protein kaput [Sus
scrofa]
Length = 407
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 381
>gi|390136660|pdb|4F3L|A Chain A, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 361
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 81/92 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 267 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 326
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 327 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 358
>gi|449483659|ref|XP_002193890.2| PREDICTED: neuronal PAS domain-containing protein 2 [Taeniopygia
guttata]
Length = 833
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/92 (80%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHMVVSYADV 356
>gi|395843246|ref|XP_003794406.1| PREDICTED: neuronal PAS domain-containing protein 2 [Otolemur
garnettii]
Length = 1035
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 481 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 540
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 541 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 572
>gi|195126649|ref|XP_002007783.1| GI12195 [Drosophila mojavensis]
gi|193919392|gb|EDW18259.1| GI12195 [Drosophila mojavensis]
Length = 1039
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 84/95 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 271 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWI 330
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRR 115
WLQT +Y++YHQ+NSKP+++VCTH+VVS+ V+++
Sbjct: 331 WLQTDYYVSYHQYNSKPDYVVCTHKVVSHAEVIKQ 365
>gi|61353791|gb|AAX44045.1| clock [Macrobrachium rosenbergii]
Length = 704
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 83/92 (90%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D AP IIGYLPFEVLGTSGYDYYHV+DLD V +CHE LM+ G+GTSCYYRFLTKGQQWI
Sbjct: 304 DHRAPTIIGYLPFEVLGTSGYDYYHVEDLDKVASCHEQLMKTGKGTSCYYRFLTKGQQWI 363
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT++YITYHQWNSKPEFIVCT+ VVSY +V
Sbjct: 364 WLQTQYYITYHQWNSKPEFIVCTNTVVSYSDV 395
>gi|395527146|ref|XP_003765712.1| PREDICTED: neuronal PAS domain-containing protein 2 [Sarcophilus
harrisii]
Length = 849
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 88/113 (77%), Gaps = 2/113 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPDSEEQSNDTG 131
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + DS + D+
Sbjct: 341 WLQTHYYITYHQWNSKPEFIVCTHTVVSYADVRVERRQELALEDSASEVVDSS 393
>gi|87280966|gb|ABD36590.1| CLOCK [Podarcis siculus]
Length = 510
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 81/97 (83%)
Query: 16 NSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTK 75
S D APPIIGYLPFEVLGTSGYDYYHVDD +++ CHE LMQ G+G SCYYRFLTK
Sbjct: 285 KSLFLDPRAPPIIGYLPFEVLGTSGYDYYHVDDPENLAKCHEHLMQYGKGKSCYYRFLTK 344
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
GQQWIWLQT +YITYHQWNS+PEFIVCTH VVSY V
Sbjct: 345 GQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 381
>gi|326913757|ref|XP_003203200.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Meleagris
gallopavo]
Length = 811
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/92 (80%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CHE LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHEHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHMVVSYADV 356
>gi|449267860|gb|EMC78751.1| Neuronal PAS domain-containing protein 2, partial [Columba livia]
Length = 674
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 268 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 327
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 328 WLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRAERRRD 366
>gi|291386198|ref|XP_002710059.1| PREDICTED: clock-like [Oryctolagus cuniculus]
Length = 848
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/119 (66%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 351 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 410
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPDSEEQSNDTGPGDSNT 137
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D E + + D +
Sbjct: 411 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPETMHPSALKDKGS 469
>gi|354482390|ref|XP_003503381.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Cricetulus griseus]
Length = 849
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 295 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 354
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 355 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 386
>gi|73970055|ref|XP_531781.2| PREDICTED: neuronal PAS domain-containing protein 2 [Canis lupus
familiaris]
Length = 878
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 325 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 384
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 385 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 416
>gi|332251538|ref|XP_003274902.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Nomascus leucogenys]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|1695799|gb|AAC51211.1| MOP4 [Homo sapiens]
Length = 626
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|338713871|ref|XP_001915018.2| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 2-like [Equus caballus]
Length = 875
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 322 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 381
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 382 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 413
>gi|431902452|gb|ELK08951.1| Neuronal PAS domain-containing protein 2 [Pteropus alecto]
Length = 838
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 287 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 346
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 347 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 378
>gi|426336611|ref|XP_004031561.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Gorilla gorilla gorilla]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|350582068|ref|XP_003124946.3| PREDICTED: neuronal PAS domain-containing protein 2 [Sus scrofa]
Length = 812
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/104 (75%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D
Sbjct: 341 WLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVRVERRQELALED 384
>gi|301767624|ref|XP_002919235.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 818
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|297666909|ref|XP_002811744.1| PREDICTED: neuronal PAS domain-containing protein 2 [Pongo abelii]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|119622239|gb|EAX01834.1| neuronal PAS domain protein 2, isoform CRA_d [Homo sapiens]
Length = 921
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 362 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 421
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 422 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 453
>gi|118600436|gb|AAH28107.1| NPAS2 protein [Homo sapiens]
Length = 622
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|332813979|ref|XP_003309214.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2 [Pan
troglodytes]
gi|397489614|ref|XP_003815819.1| PREDICTED: neuronal PAS domain-containing protein 2 [Pan paniscus]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|297266633|ref|XP_001105763.2| PREDICTED: neuronal PAS domain-containing protein 2-like isoform 2
[Macaca mulatta]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|221040198|dbj|BAH11862.1| unnamed protein product [Homo sapiens]
Length = 889
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|410954574|ref|XP_003983939.1| PREDICTED: neuronal PAS domain-containing protein 2 [Felis catus]
Length = 820
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|402891716|ref|XP_003909088.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Papio anubis]
Length = 889
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 330 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 389
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 390 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 421
>gi|281337616|gb|EFB13200.1| hypothetical protein PANDA_007843 [Ailuropoda melanoleuca]
Length = 821
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 268 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 327
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 328 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 359
>gi|139949047|ref|NP_001077232.1| neuronal PAS domain-containing protein 2 [Bos taurus]
gi|134024683|gb|AAI34581.1| NPAS2 protein [Bos taurus]
gi|296482813|tpg|DAA24928.1| TPA: neuronal PAS domain protein 2 [Bos taurus]
Length = 804
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/104 (75%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVRVERRQELALED 368
>gi|345306659|ref|XP_001512993.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Ornithorhynchus anatinus]
Length = 1369
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/99 (78%), Positives = 82/99 (82%), Gaps = 3/99 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 818 DHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQFGKGKSCYYRFLTKGQQWI 877
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL---RRD 116
WLQT +YITYHQWNSKPEFIVCTH VVSY V RRD
Sbjct: 878 WLQTHYYITYHQWNSKPEFIVCTHTVVSYGEVRAEKRRD 916
>gi|296223084|ref|XP_002757476.1| PREDICTED: neuronal PAS domain-containing protein 2 [Callithrix
jacchus]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/109 (70%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPDSEEQS 127
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D ++
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPSSEA 373
>gi|403294223|ref|XP_003938098.1| PREDICTED: neuronal PAS domain-containing protein 2 [Saimiri
boliviensis boliviensis]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/109 (70%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPDSEEQS 127
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D ++
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPSSEA 373
>gi|344284017|ref|XP_003413767.1| PREDICTED: neuronal PAS domain-containing protein 2 [Loxodonta
africana]
Length = 744
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 256 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 315
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 316 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 347
>gi|37589098|gb|AAH51351.2| Neuronal PAS domain protein 2 [Homo sapiens]
gi|47940153|gb|AAH72383.1| Neuronal PAS domain protein 2 [Homo sapiens]
gi|119622240|gb|EAX01835.1| neuronal PAS domain protein 2, isoform CRA_e [Homo sapiens]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|426224037|ref|XP_004006180.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1 [Ovis
aries]
gi|426224039|ref|XP_004006181.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2 [Ovis
aries]
Length = 804
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/104 (75%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVRVERRQELALED 368
>gi|30231248|ref|NP_840084.1| neuronal PAS domain protein 2 [Danio rerio]
gi|21685550|dbj|BAC02686.1| bHLH-PAS transcription factor [Danio rerio]
gi|190338711|gb|AAI63256.1| Neuronal PAS domain protein 2 [Danio rerio]
Length = 845
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 301 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWI 360
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTG 131
WLQT +YITYHQWNSKPEFIVCTH VVSY V R + + EE S+D
Sbjct: 361 WLQTHYYITYHQWNSKPEFIVCTHSVVSYAEV-RAERRREFGLEESSSDMA 410
>gi|332813975|ref|XP_003309213.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1 [Pan
troglodytes]
gi|410212986|gb|JAA03712.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410264234|gb|JAA20083.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410306334|gb|JAA31767.1| neuronal PAS domain protein 2 [Pan troglodytes]
gi|410339809|gb|JAA38851.1| neuronal PAS domain protein 2 [Pan troglodytes]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|332251540|ref|XP_003274903.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|22027471|ref|NP_002509.2| neuronal PAS domain-containing protein 2 [Homo sapiens]
gi|311033423|sp|Q99743.3|NPAS2_HUMAN RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP4; AltName:
Full=Class E basic helix-loop-helix protein 9;
Short=bHLHe9; AltName: Full=Member of PAS protein 4;
AltName: Full=PAS domain-containing protein 4
gi|121647028|gb|ABM64214.1| neuronal PAS domain protein 2 [Homo sapiens]
Length = 824
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|426336609|ref|XP_004031560.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Gorilla gorilla gorilla]
Length = 824
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|210032658|ref|NP_001101684.2| neuronal PAS domain protein 2 [Rattus norvegicus]
Length = 816
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|380813132|gb|AFE78440.1| neuronal PAS domain-containing protein 2 [Macaca mulatta]
Length = 824
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|80479005|gb|AAI09167.1| Neuronal PAS domain protein 2 [Mus musculus]
Length = 816
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|355751529|gb|EHH55784.1| hypothetical protein EGM_05054 [Macaca fascicularis]
Length = 826
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 267 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 326
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 327 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 358
>gi|355565941|gb|EHH22370.1| hypothetical protein EGK_05616 [Macaca mulatta]
Length = 826
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 267 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 326
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 327 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 358
>gi|161621277|ref|NP_032745.2| neuronal PAS domain-containing protein 2 [Mus musculus]
gi|148682608|gb|EDL14555.1| neuronal PAS domain protein 2 [Mus musculus]
Length = 816
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|119622236|gb|EAX01831.1| neuronal PAS domain protein 2, isoform CRA_b [Homo sapiens]
gi|119622238|gb|EAX01833.1| neuronal PAS domain protein 2, isoform CRA_b [Homo sapiens]
Length = 584
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 25 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 84
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 85 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 116
>gi|62822273|gb|AAY14822.1| unknown [Homo sapiens]
Length = 813
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 254 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 313
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 314 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 345
>gi|195168331|ref|XP_002024985.1| GL17825 [Drosophila persimilis]
gi|194108415|gb|EDW30458.1| GL17825 [Drosophila persimilis]
Length = 1039
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 83/94 (88%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYHVDDLD++V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 276 DHRAPPIIGYMPFEVLGTSGYDYYHVDDLDNIVACHEELRQTGEGKSCYYRFLTKGQQWI 335
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
WLQT ++++YHQ+N+KP+++VCTH VVSY V++
Sbjct: 336 WLQTDYFVSYHQFNTKPDYVVCTHNVVSYAEVIK 369
>gi|402891714|ref|XP_003909087.1| PREDICTED: neuronal PAS domain-containing protein 2 isoform 1
[Papio anubis]
Length = 824
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|195017046|ref|XP_001984526.1| GH16514 [Drosophila grimshawi]
gi|193898008|gb|EDV96874.1| GH16514 [Drosophila grimshawi]
Length = 1034
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 6/109 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE L Q GEG C+YRFLTKGQQWI
Sbjct: 274 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGEGKLCFYRFLTKGQQWI 333
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL------RRDNNQVPDS 123
WLQT +Y+ YHQ NSKP+++VCTH+VVSY VL R+ N+ P S
Sbjct: 334 WLQTDYYVNYHQCNSKPDYVVCTHKVVSYAEVLKQNKKDRKKANKAPTS 382
>gi|1840060|gb|AAB47250.1| neuronal PAS2 [Homo sapiens]
Length = 824
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 79/92 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGTGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|197246467|gb|AAI68989.1| Npas2 protein [Rattus norvegicus]
Length = 599
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 48 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 107
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 108 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 139
>gi|198462706|ref|XP_001352524.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
gi|198150944|gb|EAL30021.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
Length = 1037
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/99 (69%), Positives = 84/99 (84%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYHVDDLD++V CHE L Q GEG SCYYRFLTKGQQWI
Sbjct: 276 DHRAPPIIGYMPFEVLGTSGYDYYHVDDLDNIVACHEELRQTGEGKSCYYRFLTKGQQWI 335
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQ 119
WLQT ++++YHQ+N+KP+++VCTH VVSY V++ +
Sbjct: 336 WLQTDYFVSYHQFNTKPDYVVCTHNVVSYAEVIKHTQKE 374
>gi|149046310|gb|EDL99203.1| neuronal PAS domain protein 2 (predicted) [Rattus norvegicus]
Length = 388
Score = 167 bits (424), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 25 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 84
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D
Sbjct: 85 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALED 128
>gi|348538800|ref|XP_003456878.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Oreochromis niloticus]
Length = 982
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 79/92 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 410 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWI 469
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY V
Sbjct: 470 WLQTHYYITYHQWNSKPEFIVCTHTVVSYAEV 501
>gi|410915566|ref|XP_003971258.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Takifugu
rubripes]
Length = 912
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 79/92 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 332 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWI 391
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY V
Sbjct: 392 WLQTHYYITYHQWNSKPEFIVCTHTVVSYAEV 423
>gi|3914160|sp|P97460.1|NPAS2_MOUSE RecName: Full=Neuronal PAS domain-containing protein 2;
Short=Neuronal PAS2
gi|1840058|gb|AAB47249.1| neuronal PAS2 [Mus musculus]
Length = 816
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/92 (78%), Positives = 80/92 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGY+YYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYNYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 324
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 325 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 356
>gi|432899506|ref|XP_004076592.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Oryzias
latipes]
Length = 968
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 79/92 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ L+Q G+G SCYYRFLTKGQQWI
Sbjct: 403 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLLQFGKGKSCYYRFLTKGQQWI 462
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQW SKPEFIVCTH V+SY V
Sbjct: 463 WLQTHYYITYHQWTSKPEFIVCTHTVISYAEV 494
>gi|218683813|gb|ACL00861.1| CLOCK [Kryptolebias marmoratus]
Length = 741
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 92/124 (74%), Gaps = 5/124 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LM+ G+G +CYYR LTKGQQWI
Sbjct: 261 DHRAPPIIGYLPFEVLGTSGYDYYHADDLEILAKCHEHLMRYGKGKTCYYRSLTKGQQWI 320
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPG----DSN 136
WLQT +YITYHQW S+PEFIVCTH VVSY V R +Q P E+ D+ DS+
Sbjct: 321 WLQTHYYITYHQWTSRPEFIVCTHTVVSYAEV-RTKQHQKPGIEKLPPDSMANEQSQDSD 379
Query: 137 TIKM 140
++KM
Sbjct: 380 SLKM 383
>gi|351702236|gb|EHB05155.1| Neuronal PAS domain-containing protein 2 [Heterocephalus glaber]
Length = 783
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 71/91 (78%), Positives = 79/91 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 227 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 286
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVN 111
WLQT +YITYHQWNSKPEFIVCTH VVS ++
Sbjct: 287 WLQTHYYITYHQWNSKPEFIVCTHSVVSVLS 317
>gi|195379048|ref|XP_002048293.1| GJ11427 [Drosophila virilis]
gi|194155451|gb|EDW70635.1| GJ11427 [Drosophila virilis]
Length = 988
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 86/99 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLD++V CHE L Q GEG SCYYRFLTKGQQ+I
Sbjct: 270 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDNIVACHEELRQTGEGKSCYYRFLTKGQQYI 329
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQ 119
WLQT +Y++YHQ++SKP+++VCTH+V+SY ++L D+ +
Sbjct: 330 WLQTDYYVSYHQYSSKPDYVVCTHKVISYTDMLNGDSGE 368
>gi|209418766|gb|ACI46598.1| clock-2a protein [Haplochromis burtoni]
Length = 431
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 79/92 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 298 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWI 357
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
WLQT +YITYHQWNSKPEFIVCTH VVSY V
Sbjct: 358 WLQTHYYITYHQWNSKPEFIVCTHTVVSYAEV 389
>gi|302745168|gb|ADL62687.1| clock 2, partial [Phreatichthys andruzzii]
Length = 807
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPF V GTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 266 DHRASPIIGYLPFGVFGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWI 325
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTG 131
WLQT +YITYHQWNSKPEFIVCTH VVSY V R + + EE S+D
Sbjct: 326 WLQTHYYITYHQWNSKPEFIVCTHSVVSYAEV-RAERRREFGLEETSSDMA 375
>gi|227437411|gb|ACP30468.1| PAS domain protein 1 variant [Murina leucogaster]
Length = 521
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 96/128 (75%), Gaps = 9/128 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D AP IIGYLPFEVLGTSGYDYYHVDDL + CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPTIIGYLPFEVLGTSGYDYYHVDDL-KIGKCHEHLMQYGKGKSCYYRFLTKGQQWI 348
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ + ++S D+G
Sbjct: 349 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEMAADKSQDSGSD 408
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 409 NRINTVSL 416
>gi|355707723|gb|AES03043.1| neuronal PAS domain protein 2 [Mustela putorius furo]
Length = 220
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH+DDL+ + CH+ LMQ G+G SC YRFLTKGQQWI
Sbjct: 117 DHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWI 176
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSY--VNVLRRDNNQVPD 122
WLQT +YITYHQWNSKPEFIVCTH VVSY V V RR + D
Sbjct: 177 WLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALED 220
>gi|47222604|emb|CAG02969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 77/90 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 770 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWI 829
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
WLQT +YITYHQWNSKPEFIVCTH VV Y
Sbjct: 830 WLQTHYYITYHQWNSKPEFIVCTHTVVRYA 859
>gi|395146640|gb|ADX97417.2| clock protein, partial [Schistocerca gregaria]
Length = 273
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
Query: 41 YDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFI 100
YDYYHVDDL+ VVTCHEALMQKGEGTSC+YRFLTKGQQWIWLQTRFYITYHQWNSKPEFI
Sbjct: 1 YDYYHVDDLEKVVTCHEALMQKGEGTSCHYRFLTKGQQWIWLQTRFYITYHQWNSKPEFI 60
Query: 101 VCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPG 133
VCTHRVVSY++V+++ P+ E+S D+ G
Sbjct: 61 VCTHRVVSYMDVMKQMRKD-PEEGERSQDSEMG 92
>gi|443726507|gb|ELU13627.1| hypothetical protein CAPTEDRAFT_122174 [Capitella teleta]
Length = 374
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 75/87 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D PPIIGY PFEVLGTSGYDYYH +DL+ V CHE LMQ GEGTSC+YRFLTKGQQWI
Sbjct: 287 DHRGPPIIGYQPFEVLGTSGYDYYHPEDLEKVAECHEQLMQSGEGTSCFYRFLTKGQQWI 346
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVV 107
W+QT +YITYHQW+SKPEFIVCT+ VV
Sbjct: 347 WIQTHYYITYHQWSSKPEFIVCTNTVV 373
>gi|405962835|gb|EKC28478.1| Circadian locomoter output cycles protein kaput [Crassostrea gigas]
Length = 466
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 75/87 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGY+YYH DDLD + HE LMQ GEGTS YYRFLTKGQQWI
Sbjct: 281 DHRASPIIGYLPFEVLGTSGYEYYHPDDLDQIAKSHEQLMQTGEGTSSYYRFLTKGQQWI 340
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVV 107
W++TR+YITYHQWNSKPEFIVCT+ VV
Sbjct: 341 WIKTRYYITYHQWNSKPEFIVCTNVVV 367
>gi|302745170|gb|ADL62688.1| clock 1b, partial [Phreatichthys andruzzii]
Length = 314
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 73/83 (87%)
Query: 19 IYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQ 78
+ D APPIIGY+PFEVLGTSGYDYYHVDDL S+ CHE LMQ G+G SCYYRFLTKGQQ
Sbjct: 232 LLDHRAPPIIGYMPFEVLGTSGYDYYHVDDLHSLAKCHEHLMQFGKGKSCYYRFLTKGQQ 291
Query: 79 WIWLQTRFYITYHQWNSKPEFIV 101
WIWLQT +YITYHQWNS+PEFIV
Sbjct: 292 WIWLQTNYYITYHQWNSRPEFIV 314
>gi|312385502|gb|EFR29985.1| hypothetical protein AND_00709 [Anopheles darlingi]
Length = 1105
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/100 (70%), Positives = 76/100 (76%), Gaps = 16/100 (16%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSG +MQKGEGTSCYYRFLTKGQQWI
Sbjct: 309 DHRAPPIIGYLPFEVLGTSGL----------------VVMQKGEGTSCYYRFLTKGQQWI 352
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
WLQTRFYITYHQWNSKPEF+VCTHRVVSY +V+++ NQ
Sbjct: 353 WLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQMRNQT 392
>gi|391337762|ref|XP_003743234.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 386
Score = 151 bits (382), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 76/91 (83%)
Query: 19 IYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQ 78
+ D A IIGYLPFE++GTSGYDYYH+DDL +V H L+Q GEGTSC+YRF TKG Q
Sbjct: 256 LLDNRAADIIGYLPFEIIGTSGYDYYHIDDLPKIVQGHRTLLQTGEGTSCHYRFRTKGSQ 315
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSY 109
W+WLQTR+YI+Y QWNSKPE+IVCTHRV+SY
Sbjct: 316 WVWLQTRYYISYQQWNSKPEYIVCTHRVLSY 346
>gi|339649210|gb|AEJ87226.1| clock [Platynereis dumerilii]
Length = 325
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 71/84 (84%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D P I+GYLPFEVLGTSGYDYYH +DL V HE LMQ G+GTSCYYRFLTKGQQWI
Sbjct: 242 DHRGPTIVGYLPFEVLGTSGYDYYHPNDLHKVAKGHEQLMQTGKGTSCYYRFLTKGQQWI 301
Query: 81 WLQTRFYITYHQWNSKPEFIVCTH 104
WLQT +YITYHQWNSKPEFIVCTH
Sbjct: 302 WLQTTYYITYHQWNSKPEFIVCTH 325
>gi|9581833|dbj|BAB03454.1| circadian clock protein CLOCK [Coturnix japonica]
Length = 854
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 98/128 (76%), Gaps = 8/128 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYY+VDDLD++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRAPPIIGYLPFEVLGTSGYDYYYVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPG 133
WLQT +YITYHQWNS+PEFIVCTH VVSY V RR+ +P+ ++S D+G
Sbjct: 350 WLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPEIKADKSQDSGSD 409
Query: 134 DS-NTIKM 140
+ NT+ +
Sbjct: 410 NHINTVSL 417
>gi|29569838|gb|AAO84916.1| circadian locomotor output cycles kaput [Cebus apella]
Length = 116
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 8/113 (7%)
Query: 36 LGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNS 95
LGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWIWLQT +YITYHQWNS
Sbjct: 1 LGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNS 60
Query: 96 KPEFIVCTHRVVSYVNV---LRRD---NNQVPD-SEEQSNDTGPGDS-NTIKM 140
+PEFIVCTH VVSY V RR+ +P+ + ++S D+G + NT+ +
Sbjct: 61 RPEFIVCTHTVVSYAEVRAERRRELGIEESLPEAAADKSQDSGSDNRINTVSL 113
>gi|354682020|gb|AER29915.1| AT07720p1 [Drosophila melanogaster]
Length = 730
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 9/101 (8%)
Query: 38 TSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKP 97
TSGYDYYH DDLDS+V CHE L Q GEG SCYYRFLTKGQQWIWLQT +Y++YHQ+NSKP
Sbjct: 1 TSGYDYYHFDDLDSIVACHEELRQTGEGKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKP 60
Query: 98 EFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
+++VCTH+VVSY VL+ DS ++ + G+SN+I
Sbjct: 61 DYVVCTHKVVSYAEVLK-------DSRKEGQKS--GNSNSI 92
>gi|332205528|gb|AEE36606.1| clock protein, partial [Carassius auratus]
Length = 263
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 66/76 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 188 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWI 247
Query: 81 WLQTRFYITYHQWNSK 96
WLQT +YITYHQWNS+
Sbjct: 248 WLQTHYYITYHQWNSR 263
>gi|332205530|gb|AEE36607.1| clock protein [Gadus morhua]
Length = 261
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 66/76 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+ + CH+ LMQ G+G SCYYRFLTKGQQWI
Sbjct: 186 DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKHLMQLGKGKSCYYRFLTKGQQWI 245
Query: 81 WLQTRFYITYHQWNSK 96
WLQT +YITYHQWNS+
Sbjct: 246 WLQTHYYITYHQWNSR 261
>gi|81170918|gb|ABB58747.1| clock [Lutzomyia longipalpis]
Length = 147
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 61/64 (95%)
Query: 55 CHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
CHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEF+VCTHRVVSY +V++
Sbjct: 1 CHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMK 60
Query: 115 RDNN 118
+ N
Sbjct: 61 QSRN 64
>gi|322800026|gb|EFZ21134.1| hypothetical protein SINV_15710 [Solenopsis invicta]
Length = 285
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 58/60 (96%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDLD+VVTCHE+LMQKGEGTSCYYRFLTKGQQWI
Sbjct: 226 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLDNVVTCHESLMQKGEGTSCYYRFLTKGQQWI 285
>gi|284924950|dbj|BAI67740.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 57/64 (89%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE LMQKGE SCYYRFLTKGQQWI
Sbjct: 249 DHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELMQKGECKSCYYRFLTKGQQWI 308
Query: 81 WLQT 84
WLQT
Sbjct: 309 WLQT 312
>gi|170031080|ref|XP_001843415.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
gi|167868895|gb|EDS32278.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
Length = 528
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 60 MQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQ 119
MQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEF+VCTHRVVSY +V+++ NQ
Sbjct: 1 MQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMKQFRNQ 60
Query: 120 V 120
Sbjct: 61 T 61
>gi|380714580|dbj|BAL72807.1| clock, partial [Anthrenus verbasci]
Length = 294
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 59/64 (92%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFE+LGTSGYDYYHVDDL+ VV CHE+L+QKGEGTSCYYRFLTKGQQWI
Sbjct: 231 DHRAPPIIGYLPFELLGTSGYDYYHVDDLEKVVKCHESLIQKGEGTSCYYRFLTKGQQWI 290
Query: 81 WLQT 84
LQT
Sbjct: 291 XLQT 294
>gi|284924952|dbj|BAI67741.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 56/64 (87%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D PPIIGY+PFEVLGTSGYDYYH DDLDS+V CHE LMQKGE SCYYRFLTKGQQWI
Sbjct: 249 DHRVPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELMQKGECKSCYYRFLTKGQQWI 308
Query: 81 WLQT 84
WLQT
Sbjct: 309 WLQT 312
>gi|406507539|gb|AFS34613.1| clock, partial [Clunio marinus]
Length = 398
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 51/52 (98%)
Query: 63 GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR 114
GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEF+VCTHRVVSY +V+R
Sbjct: 1 GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFVVCTHRVVSYADVMR 52
>gi|27462630|gb|AAO15522.1|AF448805_1 Clock [Sebastes schlegelii]
Length = 326
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 53/62 (85%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ CH LMQ G+G SCYYRFLTKGQQWI
Sbjct: 265 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLETLAKCHGHLMQYGKGKSCYYRFLTKGQQWI 324
Query: 81 WL 82
W
Sbjct: 325 WF 326
>gi|37543022|gb|AAL66771.1| clock [Kryptolebias marmoratus]
Length = 161
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 53/63 (84%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D APPIIGYLPFEVLGTSGYDYYH DDL+ + CHE LM+ G+G +CYYRFLTKGQQWI
Sbjct: 99 DHRAPPIIGYLPFEVLGTSGYDYYHADDLEILAKCHEHLMRYGKGKTCYYRFLTKGQQWI 158
Query: 81 WLQ 83
W Q
Sbjct: 159 WFQ 161
>gi|2326259|dbj|BAA21774.1| Clock [Homo sapiens]
Length = 349
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 52/60 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D A PIIGYLPFEVLGTSGYDYYHVDDL+++ CHE LMQ G+G SCYYRFLTKGQQWI
Sbjct: 290 DHRALPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWI 349
>gi|241622613|ref|XP_002408977.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
gi|215503104|gb|EEC12598.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
Length = 123
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 53/73 (72%)
Query: 60 MQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQ 119
MQ GEGTSCYYRFLTKGQQWIWLQTR+YITYHQW+SKPEF+VCTH V+SY L +
Sbjct: 1 MQTGEGTSCYYRFLTKGQQWIWLQTRYYITYHQWSSKPEFVVCTHTVMSYDEDLSHGKSS 60
Query: 120 VPDSEEQSNDTGP 132
S T P
Sbjct: 61 ACPVAPCSQSTAP 73
>gi|119622235|gb|EAX01830.1| neuronal PAS domain protein 2, isoform CRA_a [Homo sapiens]
Length = 569
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 59 LMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
+MQ G+G SC YRFLTKGQQWIWLQT +YITYHQWNSKPEFIVCTH VVSY +V
Sbjct: 200 VMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADV 253
>gi|290467749|gb|ADD26669.1| NPAS2 protein [Oncorhynchus mykiss]
Length = 72
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Query: 61 QKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
Q G+G SCYYRFL+KGQQWIWLQT +YITYHQWNSKPEFIVCTH VVSY V R + +
Sbjct: 1 QFGKGKSCYYRFLSKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEV-RAERRRE 59
Query: 121 PDSEEQSND 129
EE S D
Sbjct: 60 FGLEETSPD 68
>gi|290467747|gb|ADD26668.1| clock 3 protein [Oncorhynchus mykiss]
Length = 51
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 45/50 (90%)
Query: 63 GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
G+G SCYYRFL+KGQQWIWLQT +YITYHQWNSKPEFIVCTH VVSY V
Sbjct: 1 GKGKSCYYRFLSKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAEV 50
>gi|156402728|ref|XP_001639742.1| predicted protein [Nematostella vectensis]
gi|156226872|gb|EDO47679.1| predicted protein [Nematostella vectensis]
Length = 671
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY+ E++G+S Y H +DL+++ H+ L+ KG +CYYRFLTKGQ ++W+++
Sbjct: 276 VIGYMSNELVGSSLYQNIHPNDLENITRYHKILVYKGRVNTCYYRFLTKGQAYLWIRSCC 335
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNV 112
YI+Y+QWNS+PEFI+ T S V
Sbjct: 336 YISYNQWNSRPEFIIATSTTASQAEV 361
>gi|313225481|emb|CBY06955.1| unnamed protein product [Oikopleura dioica]
Length = 569
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+LG S +D HVDDL + L+Q GE + YR +TKG+QW+W+Q R Y
Sbjct: 232 LGYSSLELLGKSYFDLVHVDDLKKIEESFGKLLQCGELQAPLYRLMTKGRQWLWIQPRLY 291
Query: 88 ITYHQWNSKPEFIVCTHRVVSYVNVL 113
+ YHQW+ K E I TH VV+Y +VL
Sbjct: 292 VQYHQWSRKAESINVTHFVVTYQDVL 317
>gi|449670512|ref|XP_002167197.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Hydra
magnipapillata]
Length = 518
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 8 TFCMSDLMNSTIYDL--VAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG 65
TF ++ I+++ + I+GY E+LG S Y Y H+ D D V CHE L++KG+
Sbjct: 249 TFISKHSLDMKIFEMDNITSSILGYSDKEMLGYSWYIYIHLCDTDVVKACHETLLKKGQS 308
Query: 66 TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
S YYR L W+WLQT + Y + N +P++I C H VVS
Sbjct: 309 VSAYYRVLHLNGGWLWLQTIGNVVYLESNGQPQYIFCMHTVVS 351
>gi|294961106|gb|ADF50044.1| hypoxia-inducible factor 2 alpha [Megalobrama amblycephala]
Length = 835
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M ST D ++GY P ++LG S YD+YH D D+V H+ L KG+ S YR L
Sbjct: 249 MKSTYCDDRVTELMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++W++T+ + Y+ NS+P+ IVC + V+S V
Sbjct: 309 KNGGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|156397887|ref|XP_001637921.1| predicted protein [Nematostella vectensis]
gi|156225037|gb|EDO45858.1| predicted protein [Nematostella vectensis]
Length = 340
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E++G S Y ++H DLD+V+ H+ L+ KG+ S YYRF+ +G W+WLQT+
Sbjct: 259 LLGYTREEMIGKSWYSFHHAADLDNVLNTHKMLLTKGQSVSKYYRFMVRGGGWVWLQTKA 318
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ Y +P+F+ C + V+
Sbjct: 319 NVVYDSKTCQPQFVFCINYVL 339
>gi|156359347|ref|XP_001624731.1| predicted protein [Nematostella vectensis]
gi|156211529|gb|EDO32631.1| predicted protein [Nematostella vectensis]
Length = 376
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I GYLP EV+GTSGYDY+H +DL+ V H++ +Q GE YRFL K +I L+TR
Sbjct: 296 ICGYLPQEVIGTSGYDYFHPEDLEIVAQSHKSALQ-GETAVSSYRFLCKSGHYIPLRTRS 354
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ + W + EF+VCT+ V++
Sbjct: 355 TLFRNPWTKEIEFLVCTNDVLT 376
>gi|50403829|gb|AAT76668.1| hypoxia-inducible factor 2 alpha [Ctenopharyngodon idella]
Length = 835
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S YD+YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|407316762|gb|AFU07563.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
nobilis]
Length = 832
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S YD+YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|407316772|gb|AFU07568.1| hypoxia-inducible factor 2 alpha subunit [Hypophthalmichthys
molitrix]
Length = 832
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S YD+YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|405952229|gb|EKC20066.1| Endothelial PAS domain-containing protein 1 [Crassostrea gigas]
Length = 746
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P EV+G + Y +++ D V CH+ L+ KG S YYRF+ K QW+W+QTR
Sbjct: 176 LIGYDPEEVIGKTAYQFHNPLDAKLVGDCHQKLIVKGSSVSNYYRFIGKNCQWVWMQTRA 235
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I Y+ N P++IVC + ++S
Sbjct: 236 TIIYNTSNV-PQYIVCMNYIIS 256
>gi|407316768|gb|AFU07566.1| hypoxia-inducible factor 2 alpha subunit [Gymnocypris namensis]
Length = 830
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S YD+YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYSPEDLLGRSAYDFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|390370839|ref|XP_791998.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Strongylocentrotus purpuratus]
Length = 424
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP+ F M+ T D A ++GYLP E+LGTS Y+YYH+DD+ S+ H+ +
Sbjct: 249 IQLKPIEFVSRHAMDGKYTFVDQRATAVMGYLPQELLGTSCYEYYHIDDISSMAEYHKTV 308
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNN 118
+ E + YRF K +I L++R + + W + E++V T+ +V+ + ++N
Sbjct: 309 LSSKEKILTTSYRFRAKNGDFILLRSRMFTFRNPWTKEIEYVVSTNTLVNKDEAVASNSN 368
Query: 119 QV-PDSEEQ 126
+ P +++Q
Sbjct: 369 ECGPTTKDQ 377
>gi|348501488|ref|XP_003438301.1| PREDICTED: endothelial PAS domain-containing protein 1 [Oreochromis
niloticus]
Length = 879
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++LG S YD+YH D DSV H+ L KG+ S YR L
Sbjct: 253 MKFTYCDERVTELMGYTPEDLLGRSIYDFYHALDSDSVTKSHQNLCTKGQAVSGQYRMLA 312
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ IVC + V+S
Sbjct: 313 KNGGYVWVETQGTVIYNSRNSQPQCIVCINYVLS 346
>gi|115744083|ref|XP_001196975.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Strongylocentrotus purpuratus]
Length = 240
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP+ F M+ T D A ++GYLP E+LGTS Y+YYH+DD+ S+ H+ +
Sbjct: 65 IQLKPIEFVSRHAMDGKYTFVDQRATAVMGYLPQELLGTSCYEYYHIDDISSMAEYHKTV 124
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNN 118
+ E + YRF K +I L++R + + W + E++V T+ +V+ + ++N
Sbjct: 125 LSSKEKILTTSYRFRAKNGDFILLRSRMFTFRNPWTKEIEYVVSTNTLVNKDEAVASNSN 184
Query: 119 QV-PDSEEQ 126
+ P +++Q
Sbjct: 185 ECGPTTKDQ 193
>gi|390334418|ref|XP_003723925.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Strongylocentrotus purpuratus]
Length = 399
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP+ F M+ T D A ++GYLP E+LGTS Y+YYH+DD+ S+ H+ +
Sbjct: 103 IQLKPIEFVSRHAMDGKYTFVDQRATAVMGYLPQELLGTSCYEYYHIDDISSMAEYHKTV 162
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNN 118
+ E + YRF K +I L++R + + W + E++V T+ +V+ + ++N
Sbjct: 163 LSSKEKILTTSYRFRAKNGDFILLRSRMFTFRNPWTKEIEYVVSTNTLVNKDEAVASNSN 222
Query: 119 QV-PDSEEQ 126
+ P +++Q
Sbjct: 223 ECGPTTKDQ 231
>gi|407316770|gb|AFU07567.1| hypoxia-inducible factor 2 alpha subunit [Polyodon spathula]
Length = 852
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D DS+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 259 LMGYCPEELLGRSVYEFYHALDSDSMTKSHQNLCTKGQAVSSQYRMLAKHGGYVWLETQG 318
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 319 TVIYNTRNSQPQCIVCVNFVLSDI 342
>gi|190337520|gb|AAI63440.1| Epas1 protein [Danio rerio]
Length = 834
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D ++V H+ L KG+ S YR L K ++W++TR
Sbjct: 261 LMGYNPEDLLGRSAYEFYHALDAENVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETRG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|89886285|ref|NP_001034895.1| endothelial PAS domain-containing protein 1 [Danio rerio]
gi|87242613|gb|ABD33838.1| hypoxia inducible factor 2 alpha [Danio rerio]
Length = 832
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D ++V H+ L KG+ S YR L K ++W++TR
Sbjct: 261 LMGYNPEDLLGRSAYEFYHALDAENVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETRG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|87204423|gb|ABD32159.1| hypoxia-inducible factor 2 alpha [Micropogonias undulatus]
Length = 847
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++LG S YD+YH D DSV H L KG+ S YR L
Sbjct: 257 MKFTYCDERVTELMGYTPEDLLGRSIYDFYHALDSDSVTKSHHNLCTKGQAVSGQYRMLA 316
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ IVC + V+S
Sbjct: 317 KNGGFVWVETQGTVIYNSRNSQPQCIVCINYVLS 350
>gi|410900798|ref|XP_003963883.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Takifugu rubripes]
Length = 864
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++LG S YD+YH D D V H+ L KG+ + YR L
Sbjct: 251 MKFTYCDERVTELMGYTPEDLLGRSVYDFYHALDSDKVTKSHQNLCTKGQAVTAQYRMLA 310
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K +IW++T+ + Y+ NS+P+ IVC + V+S
Sbjct: 311 KNGGFIWVETQGTVIYNSRNSQPQCIVCINYVLS 344
>gi|407316774|gb|AFU07569.1| hypoxia-inducible factor 2 alpha subunit [Schizothorax prenanti]
Length = 833
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYSPEDLLGRSAYEFYHALDSDNVTKSHQNLCTKGQAVSGQYRMLAKNGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDV 344
>gi|407316744|gb|AFU07554.1| hypoxia-inducible factor 1 alpha subunit [Polypterus senegalus]
Length = 801
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYQPEDLLGRSVYEYYHAMDSDHLTKTHHNLFAKGQATTGQYRMLAKNGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 322 TVIYNSKNSQPQCIVCVNYVLSGV 345
>gi|170031078|ref|XP_001843414.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
gi|167868894|gb|EDS32277.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
Length = 344
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEA 58
D APPIIGYLPFEVLGTSGYDYYH DDL+ VV+CHEA
Sbjct: 305 DHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSCHEA 342
>gi|325513893|gb|ADZ23995.1| hypoxia-inducible factor 2a [Myxocyprinus asiaticus]
Length = 782
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D DSV H+ L KG+ S YR L K ++W++T+
Sbjct: 261 LMGYNPEDLLGRSAYEFYHALDSDSVTKSHQNLCTKGQAVSGQYRMLAKHGGYVWVETQG 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 321 TVIYNSRNSQPQCIVCVNYVLSDI 344
>gi|407316760|gb|AFU07562.1| hypoxia-inducible factor 2 alpha subunit [Polypterus senegalus]
Length = 848
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E+LG S YD+YH D DS+ H L KG+ S YR L
Sbjct: 249 MKFTYCDERITELMGYSPEELLGRSIYDFYHALDSDSLTKSHHNLCTKGQAVSGQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++W++T+ + Y+ NS+P+ IVC + V+S +
Sbjct: 309 KHGGYVWIETQGTVIYNSRNSQPQCIVCINYVLSEI 344
>gi|148229705|ref|NP_001080449.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Xenopus laevis]
gi|27696866|gb|AAH43769.1| Hif1a-prov protein [Xenopus laevis]
Length = 802
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LVGYEPDELLGRSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 322 TVIYNSKNSQPQCIVCVNYVLSEV 345
>gi|195107625|ref|XP_001998409.1| GI23647 [Drosophila mojavensis]
gi|193915003|gb|EDW13870.1| GI23647 [Drosophila mojavensis]
Length = 1064
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|296240121|gb|ADH01742.1| hypoxia-inducible factor 2 alpha [Callionymus valenciennei]
Length = 782
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S YD+YH D D+V H+ L KG+ S YR L K ++W++T+
Sbjct: 259 LMGYSPEDLIGRSVYDFYHALDSDNVTKSHQNLCMKGQAVSRQYRMLAKTGGYVWMETQG 318
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 319 TVIYNNRNSQPQCIVCVNYVLSDV 342
>gi|443702175|gb|ELU00336.1| hypothetical protein CAPTEDRAFT_145851, partial [Capitella teleta]
Length = 599
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY E+L SGYD H DDL H+ L++ G YR +TK +WIWLQT
Sbjct: 275 LFGYSDRELLERSGYDLIHPDDLSYYAAAHQELIKTGSSGLIAYRLMTKDFRWIWLQTSS 334
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y NSKP+F++CTHR ++
Sbjct: 335 KVIYK--NSKPDFVICTHRHLT 354
>gi|344273483|ref|XP_003408551.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Loxodonta
africana]
Length = 871
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S YDYYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 311 LMGYEPEELLGRSIYDYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 370
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 371 TVIYNTKNSQPQCIVCVNYVVS 392
>gi|19716307|gb|AAL95711.1|AF402782_1 hypoxia-inducible factor 2 alpha [Fundulus heteroclitus]
Length = 873
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +IGY P +++G S Y++YH D DSV H L KG+ S YR L
Sbjct: 256 MKFTYCDDKVTELIGYSPEDLMGRSIYEFYHALDSDSVTKSHHNLCTKGQAVSGQYRMLA 315
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++W++T+ + Y+ NS+P+ IVC + V+S V
Sbjct: 316 KNGGYVWVETQGTVIYNSRNSQPQCIVCINYVLSDV 351
>gi|443692247|gb|ELT93887.1| hypothetical protein CAPTEDRAFT_107169 [Capitella teleta]
Length = 106
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E++G + Y +++ D D + CH L+ KG S YYRFL
Sbjct: 14 MTFTFCDTRILTLVGYEPDELIGKTAYHFHNPLDADKIKGCHSNLIHKGTSVSKYYRFLG 73
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K +W+W+QTR I + N +P+++VC + V+
Sbjct: 74 KTGEWVWMQTRATIIFSAGN-RPQYVVCMNYVIG 106
>gi|386765904|ref|NP_001247140.1| spineless, isoform C [Drosophila melanogaster]
gi|386765906|ref|NP_001163629.2| spineless, isoform D [Drosophila melanogaster]
gi|383292749|gb|AFH06458.1| spineless, isoform C [Drosophila melanogaster]
gi|383292750|gb|ACZ94925.2| spineless, isoform D [Drosophila melanogaster]
Length = 1015
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|432942116|ref|XP_004082967.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oryzias latipes]
Length = 620
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 7 VTFCMSDLMNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG- 65
VT C D T D A +IGYLP EVLGTS Y+Y+H DDL + H +++ E
Sbjct: 341 VTRCAID-GKFTFVDQQATTVIGYLPQEVLGTSCYEYFHQDDLQHLAAKHRQVLRSKEKI 399
Query: 66 -TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
T C Y+F TK ++ LQ++++ + W + EFIV +RV+S
Sbjct: 400 ETQC-YKFKTKHGSYVSLQSQWFSFTNPWTKEVEFIVSLNRVIS 442
>gi|195451109|ref|XP_002072771.1| GK13504 [Drosophila willistoni]
gi|194168856|gb|EDW83757.1| GK13504 [Drosophila willistoni]
Length = 1031
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|194744809|ref|XP_001954885.1| GF16518 [Drosophila ananassae]
gi|190627922|gb|EDV43446.1| GF16518 [Drosophila ananassae]
Length = 1071
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 316 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 375
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 376 RLVYK--NSKPDFVICTHR 392
>gi|116248098|sp|Q0PGG7.1|HIF1A_BOSMU RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|111143453|gb|ABH06558.1| hypoxia inducible factor isoform 1a [Bos grunniens]
Length = 823
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKKGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|67970146|dbj|BAE01417.1| unnamed protein product [Macaca fascicularis]
Length = 826
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHGMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|195037953|ref|XP_001990425.1| GH18248 [Drosophila grimshawi]
gi|193894621|gb|EDV93487.1| GH18248 [Drosophila grimshawi]
Length = 1082
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADTELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|195389004|ref|XP_002053168.1| GJ23490 [Drosophila virilis]
gi|194151254|gb|EDW66688.1| GJ23490 [Drosophila virilis]
Length = 1099
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|195152766|ref|XP_002017307.1| GL22243 [Drosophila persimilis]
gi|194112364|gb|EDW34407.1| GL22243 [Drosophila persimilis]
Length = 1100
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|194901278|ref|XP_001980179.1| GG19993 [Drosophila erecta]
gi|190651882|gb|EDV49137.1| GG19993 [Drosophila erecta]
Length = 1057
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|102621855|gb|ABF71072.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 800
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LVGYDPDELLGRSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 322 TVIYNSKNSQPQCIVCVNYVLSEV 345
>gi|47224749|emb|CAG00343.1| unnamed protein product [Tetraodon nigroviridis]
Length = 593
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S YD+YH D ++V H+ L KG+ + YR L K ++W++T+
Sbjct: 186 LMGYTPEDLLGRSVYDFYHALDSENVTKSHQNLCTKGQAVTAQYRMLAKNGGYVWVETQG 245
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + ++S V
Sbjct: 246 TVIYNSRNSQPQCIVCINYILSDV 269
>gi|390178922|ref|XP_003736760.1| GA20013, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859640|gb|EIM52833.1| GA20013, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 1142
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 281 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 340
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 341 RLVYK--NSKPDFVICTHR 357
>gi|326919978|ref|XP_003206253.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Meleagris gallopavo]
Length = 633
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS N+L + P DS Q+ +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TNILDSGDAAFPQLAASPHSMDSVLQAGE 478
Query: 130 TGPGDSN 136
GP S+
Sbjct: 479 GGPKRSH 485
>gi|195349386|ref|XP_002041226.1| GM15436 [Drosophila sechellia]
gi|194122831|gb|EDW44874.1| GM15436 [Drosophila sechellia]
Length = 1077
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 318 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 377
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 378 RLVYK--NSKPDFVICTHR 394
>gi|111143456|gb|ABH06559.1| hypoxia inducible factor isoform 1b [Bos grunniens]
Length = 823
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|343055501|gb|AEL79592.1| hypoxia-inducible factor 1 alpha subunit [Ovis ammon]
Length = 452
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 44 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 103
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 104 TVIYNTKNSQPQCIVCVNYVVSGI 127
>gi|32469795|sp|Q9XTA5.1|HIF1A_BOVIN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|5019612|dbj|BAA78675.1| hypoxia-inducible factor-1 alpha [Bos taurus]
Length = 823
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|147900690|ref|NP_001086426.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
gi|116487674|gb|AAI26006.1| HIF-1a protein [Xenopus laevis]
Length = 800
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LVGYDPDELLGRSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 322 TVIYNSKNSQPQCIVCVNYVLSEV 345
>gi|37779200|gb|AAO72733.1| hypoxia-inducible factor 1 alpha [Xenopus laevis]
Length = 489
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 247 LVGYDPDELLGRSVYEYYHALDSDHLTKAHHNMFTKGQVTTGQYRMLAKKGGYVWVETQA 306
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 307 TVIYNSKNSQPQCIVCVNYVLSEV 330
>gi|195500996|ref|XP_002097612.1| GE26316 [Drosophila yakuba]
gi|194183713|gb|EDW97324.1| GE26316 [Drosophila yakuba]
Length = 1062
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|117935055|ref|NP_776764.2| hypoxia-inducible factor 1-alpha [Bos taurus]
gi|47933909|gb|AAT39520.1| hypoxia inducible factor-1a [Bos grunniens]
gi|117306677|gb|AAI26623.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Bos taurus]
gi|296482937|tpg|DAA25052.1| TPA: hypoxia-inducible factor 1-alpha [Bos taurus]
Length = 823
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|440910232|gb|ELR60049.1| Hypoxia-inducible factor 1-alpha, partial [Bos grunniens mutus]
Length = 814
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 253 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 312
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 313 TVIYNTKNSQPQCIVCVNYVVSGI 336
>gi|343055700|gb|AEL79602.1| hypoxia-inducible factor 1 alpha subunit [Ovis aries]
Length = 452
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 44 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 103
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 104 TVIYNTKNSQPQCIVCVNYVVSGI 127
>gi|334310623|ref|XP_001377570.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Monodelphis
domestica]
Length = 1007
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 448 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 507
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 508 TVIYNTKNSQPQCIVCVNYVVS 529
>gi|195570392|ref|XP_002103191.1| GD20292 [Drosophila simulans]
gi|194199118|gb|EDX12694.1| GD20292 [Drosophila simulans]
Length = 1075
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 320 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 379
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 380 RLVYK--NSKPDFVICTHR 396
>gi|18858361|ref|NP_571653.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Danio rerio]
gi|7595272|gb|AAF64396.1|AF144691_1 Bmal2 [Danio rerio]
Length = 575
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F M+ T D A I+GYLP E+LGTS Y+Y+H+DDL + H +
Sbjct: 291 IKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHLAERHRKV 350
Query: 60 MQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
++ E T+C Y+F TK ++ LQ++++ + W + E+IV T+ VVS
Sbjct: 351 LRSKEKIETNC-YKFKTKSGSFVNLQSQWFSFINPWTKEVEYIVSTNTVVS 400
>gi|166343755|gb|ABY86628.1| hypoxia-inducible factor 1 alpha [Mustelus canis]
Length = 819
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 261 LMGYQPEELLGRSVYEFYHAMDSDHLTKTHHDLFTKGQATTGQYRMLGKEGGYVWVETQA 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV----NVLRRDNNQ-VPDSEEQSND 129
+ Y+ NS+P+ IVC + V+S + VL D + P S+E+S +
Sbjct: 321 TVIYNSKNSQPQCIVCVNYVLSGLVEKEVVLSLDQTECAPVSDEKSEE 368
>gi|449280889|gb|EMC88114.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Columba livia]
Length = 626
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS NVL + P DS Q+ +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TNVLDSGDAAFPQLAASPHSMDSVLQAGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|340382383|ref|XP_003389699.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Amphimedon queenslandica]
Length = 341
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCH-EALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GYLP +++G + YDY+H DD+ ++ H EA+ Q+ + +YRFL+K ++W+WL +
Sbjct: 74 ILGYLPQDLIGHNSYDYFHPDDMQKMIQLHHEAMKQRTPMPTVHYRFLSKDKKWVWLAMK 133
Query: 86 FYITYHQWNSKPEFIVCTHRV 106
+ + ++ + E++VCT+ V
Sbjct: 134 AFSFVNPFSHQVEYVVCTNVV 154
>gi|444245673|gb|AGD94518.1| cycle, partial [Solenopsis invicta]
Length = 1014
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 5 KPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KPV F M+ D P++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 694 KPVQFVSRHAMDGKFLFVDQRVTPVLGFLPQELLGTSMYEYYHHDDIPHLAGSHKAALQT 753
Query: 63 GEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
E T+ YRF +KG ++ LQ+ + + W E+++ + V + + NN+
Sbjct: 754 SERVTTQIYRFRSKGANFVRLQSEWKSFRNPWTKDIEYLIAKNSAV-FCDAHLGGNNRSE 812
Query: 122 DSEEQSN 128
DS Q N
Sbjct: 813 DSSVQGN 819
>gi|426233494|ref|XP_004010752.1| PREDICTED: hypoxia-inducible factor 1-alpha [Ovis aries]
Length = 764
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 203 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 262
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 263 TVIYNTKNSQPQCIVCVNYVVSGI 286
>gi|340382385|ref|XP_003389700.1| PREDICTED: hypothetical protein LOC100637558, partial [Amphimedon
queenslandica]
Length = 340
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCH-EALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GYLP +++G + YDY+H DD+ ++ H EA+ Q+ + +YRFL+K ++W+WL +
Sbjct: 70 ILGYLPQDLIGHNSYDYFHPDDMQKMIQLHHEAMKQRTPMPTVHYRFLSKDKKWVWLAMK 129
Query: 86 FYITYHQWNSKPEFIVCTHRV 106
+ + ++ + E++VCT+ V
Sbjct: 130 AFSFVNPFSHQVEYVVCTNVV 150
>gi|82206301|sp|Q6YGZ5.1|BMAL1_TYTAL RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|37722551|gb|AAO06118.1| BMAL1 [Tyto alba]
Length = 633
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS NVL + P DS Q+ +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TNVLDSGDAAFPQLAASPHSMDSVLQAGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|111143467|gb|ABH06560.1| hypoxia inducible factor isoform 2 [Bos grunniens]
Length = 864
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 303 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 362
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 363 TVIYNTKNSQPQCIVCVNYVVSGI 386
>gi|17136514|ref|NP_476748.1| spineless, isoform A [Drosophila melanogaster]
gi|7300141|gb|AAF55308.1| spineless, isoform A [Drosophila melanogaster]
Length = 884
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|327259020|ref|XP_003214336.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Anolis
carolinensis]
Length = 835
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LIGYDPEELLGRSIYEYYHALDSDHLTKTHHDMFAKGQVTTGQYRMLAKQGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVLSGV 369
>gi|395745967|ref|XP_002824869.2| PREDICTED: hypoxia-inducible factor 1-alpha [Pongo abelii]
Length = 668
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|194385768|dbj|BAG65259.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 13 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 72
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 73 TVIYNTKNSQPQCIVCVNYVVSGI 96
>gi|348506030|ref|XP_003440563.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oreochromis niloticus]
Length = 620
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
V KP F M+ T D A I+GYLP E+LGTS Y+Y+H DDL + H +
Sbjct: 335 VRVKPTEFITRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHQDDLPHLADRHRKV 394
Query: 60 MQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY-VNVLRRD 116
++ E T+C Y+F TK ++ LQ++++ + W + E+IV T+ V+SY + R
Sbjct: 395 LRSKEKIETNC-YKFKTKYGSFVTLQSQWFSFVNPWTKELEYIVSTNTVISYDPSRAGRS 453
Query: 117 NNQVPDSEEQSNDTGPGD 134
N+ SE+ SN D
Sbjct: 454 GNK---SEQSSNPKASED 468
>gi|124054287|gb|ABM89354.1| HIF1A [Pongo pygmaeus]
Length = 439
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 4 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 63
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 64 TVIYNTKNSQPQCIVCVNYVVSGI 87
>gi|3132524|gb|AAD09205.1| Ahr homolog spineless [Drosophila melanogaster]
Length = 884
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 291 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 350
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 351 RLVYK--NSKPDFVICTHR 367
>gi|54020803|ref|NP_001005647.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
gi|49250453|gb|AAH74648.1| endothelial PAS domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 862
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ + YR L K ++W++T+
Sbjct: 263 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCAKGQVVTGQYRMLAKHGGYLWVETQS 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 323 TVIYNTRNSQPQCIVCVNYVLSEI 346
>gi|390178920|ref|XP_001359453.3| GA20013, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859639|gb|EAL28599.3| GA20013, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 878
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I+GY E++ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 251 ILGYADAELVNMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGEWQWLQTSS 310
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 311 RLVYK--NSKPDFVICTHR 327
>gi|359320071|ref|XP_003639249.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Canis lupus
familiaris]
Length = 823
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|359320073|ref|XP_003639250.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Canis lupus
familiaris]
Length = 732
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|407316756|gb|AFU07560.1| hypoxia-inducible factor 1 alpha subunit [Polyodon spathula]
Length = 784
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGFVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVLSGV 346
>gi|48927335|emb|CAG29396.1| hypoxia inducible factor 1 alpha [Spalax judaei]
Length = 824
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|410962414|ref|XP_003987765.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Felis catus]
Length = 824
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|407316750|gb|AFU07557.1| hypoxia-inducible factor 1 alpha subunit [Lepisosteus platostomus]
Length = 803
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGFVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVLSGV 345
>gi|26329679|dbj|BAC28578.1| unnamed protein product [Mus musculus]
Length = 837
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|3790535|gb|AAC68568.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
Length = 826
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|226061948|ref|NP_034561.2| hypoxia-inducible factor 1-alpha [Mus musculus]
gi|32470615|sp|Q61221.3|HIF1A_MOUSE RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting protein
gi|148704553|gb|EDL36500.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Mus
musculus]
Length = 836
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|149051449|gb|EDM03622.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Rattus
norvegicus]
Length = 826
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|26345338|dbj|BAC36320.1| unnamed protein product [Mus musculus]
Length = 736
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 162 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 221
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 222 TVIYNTKNSQPQCIVCVNYVVSGI 245
>gi|349604849|gb|AEQ00283.1| Hypoxia-inducible factor 1 alpha-like protein, partial [Equus
caballus]
Length = 667
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 156 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 215
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 216 TVIYNTKNSQPQCIVCVNYVVSGI 239
>gi|4504385|ref|NP_001521.1| hypoxia-inducible factor 1-alpha isoform 1 [Homo sapiens]
gi|397523303|ref|XP_003831675.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Pan
paniscus]
gi|2498017|sp|Q16665.1|HIF1A_HUMAN RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha; AltName: Full=ARNT-interacting
protein; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP1; AltName: Full=Class E basic
helix-loop-helix protein 78; Short=bHLHe78; AltName:
Full=Member of PAS protein 1; AltName: Full=PAS
domain-containing protein 8
gi|6636317|gb|AAF20139.1|AF207601_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636319|gb|AAF20140.1|AF207602_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|6636338|gb|AAF20149.1|AF208487_1 hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|881346|gb|AAC50152.1| hypoxia-inducible factor 1 alpha [Homo sapiens]
gi|1144013|gb|AAC51210.1| MOP1 [Homo sapiens]
gi|11995455|gb|AAG43026.1| hypoxia-inducible factor 1 alpha subunit [Homo sapiens]
gi|15214788|gb|AAH12527.1| Hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|32879895|gb|AAP88778.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Homo sapiens]
gi|61362865|gb|AAX42294.1| hypoxia-inducible factor 1 alpha subunit [synthetic construct]
gi|119601213|gb|EAW80807.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|119601214|gb|EAW80808.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_b [Homo sapiens]
gi|168278044|dbj|BAG11000.1| hypoxia-inducible factor 1 alpha [synthetic construct]
gi|264685689|dbj|BAI49183.1| hypoxia-inducible factor 1, alpha subunit, variant K12NR [Homo
sapiens]
gi|1097959|prf||2114407A hypoxia-inducible factor 1
Length = 826
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|348573541|ref|XP_003472549.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cavia porcellus]
Length = 873
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 307 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 366
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 367 TVIYNTKNSQPQCIVCVNYVVSGI 390
>gi|166343757|gb|ABY86629.1| hypoxia-inducible factor 1 alpha [Rana temporaria]
Length = 806
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P E+LG S YDYYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 259 LAGYEPDELLGQSVYDYYHALDSDHLTKAHHDMFTKGQVTTGQYRMLAKKGGYVWVETQA 318
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 319 TVIYNTKNSQPQCIVCVNYVLS 340
>gi|119601212|gb|EAW80806.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_a [Homo sapiens]
Length = 827
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|197098558|ref|NP_001126975.1| hypoxia-inducible factor 1-alpha [Pongo abelii]
gi|55733347|emb|CAH93355.1| hypothetical protein [Pongo abelii]
Length = 827
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|148251122|gb|ABQ53550.1| hypoxia-inducible factor 1 alpha [Eospalax cansus]
Length = 818
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|410962416|ref|XP_003987766.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Felis catus]
Length = 733
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|355778653|gb|EHH63689.1| hypothetical protein EGM_16704 [Macaca fascicularis]
Length = 827
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|178056663|ref|NP_001116596.1| hypoxia-inducible factor 1-alpha [Sus scrofa]
gi|118136505|gb|ABK62873.1| hypoxia-inducible factor 1alpha [Sus scrofa]
Length = 824
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|2197095|gb|AAC53455.1| hypoxia-inducible factor 1 alpha [Mus musculus]
gi|2289249|gb|AAC53461.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|118573327|sp|Q309Z6.1|HIF1A_EOSBA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|78058356|gb|ABB17537.1| hypoxia inducible factor 1 alpha subunit [Eospalax baileyi]
Length = 819
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|332237268|ref|XP_003267827.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Nomascus
leucogenys]
Length = 826
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|281349362|gb|EFB24946.1| hypothetical protein PANDA_000857 [Ailuropoda melanoleuca]
Length = 812
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 252 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 311
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 312 TVIYNTKNSQPQCIVCVNYVVSGI 335
>gi|189065475|dbj|BAG35314.1| unnamed protein product [Homo sapiens]
Length = 826
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|2821940|emb|CAA70306.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 822
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|74219449|dbj|BAE29500.1| unnamed protein product [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|395843416|ref|XP_003794481.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Otolemur
garnettii]
Length = 736
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|109083868|ref|XP_001099149.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 7 [Macaca
mulatta]
gi|402876371|ref|XP_003901945.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Papio
anubis]
gi|380787331|gb|AFE65541.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|383409707|gb|AFH28067.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
gi|384942934|gb|AFI35072.1| hypoxia-inducible factor 1-alpha isoform 1 [Macaca mulatta]
Length = 826
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|20070686|gb|AAH26139.1| Hypoxia inducible factor 1, alpha subunit [Mus musculus]
Length = 836
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|397523307|ref|XP_003831677.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Pan
paniscus]
Length = 850
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVVSGI 369
>gi|354492579|ref|XP_003508425.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Cricetulus
griseus]
Length = 818
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 250 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 310 TVIYNTKNSQPQCIVCVNYVVSGI 333
>gi|344254779|gb|EGW10883.1| Hypoxia-inducible factor 1 alpha [Cricetulus griseus]
Length = 820
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 250 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 310 TVIYNTKNSQPQCIVCVNYVVSGI 333
>gi|338719808|ref|XP_001493256.3| PREDICTED: hypoxia-inducible factor 1-alpha-like [Equus caballus]
Length = 764
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 203 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 262
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 263 TVIYNTKNSQPQCIVCVNYVVSGI 286
>gi|2113881|emb|CAA70305.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 250 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 310 TVIYNTKNSQPQCIVCVNYVVSGI 333
>gi|63028439|gb|AAY27087.1| hypoxia-inducible factor 1 alpha [Microtus oeconomus]
Length = 828
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|343055703|gb|AEL79603.1| hypoxia-inducible factor 1 alpha subunit [Pantholops hodgsonii]
Length = 823
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|332237270|ref|XP_003267828.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Nomascus
leucogenys]
Length = 735
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|31077211|ref|NP_851397.1| hypoxia-inducible factor 1-alpha isoform 2 [Homo sapiens]
gi|397523305|ref|XP_003831676.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Pan
paniscus]
gi|16326344|dbj|BAB70608.1| hypoxia-inducible factor 1 alpha variant [Homo sapiens]
gi|119601215|gb|EAW80809.1| hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor), isoform CRA_c [Homo sapiens]
Length = 735
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|109083876|ref|XP_001098939.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 5 [Macaca
mulatta]
gi|402876373|ref|XP_003901946.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Papio
anubis]
gi|383409709|gb|AFH28068.1| hypoxia-inducible factor 1-alpha isoform 2 [Macaca mulatta]
Length = 735
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|4379202|emb|CAA64833.1| hypoxia-inducible factor one alpha [Mus musculus]
Length = 810
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 250 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 310 TVIYNTKNSQPQCIVCVNYVVSGI 333
>gi|403264367|ref|XP_003924457.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Saimiri
boliviensis boliviensis]
Length = 826
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|298104182|gb|ADI54941.1| hypoxia inducible factor 1 alpha subunit [Microtus kikuchii]
Length = 828
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|297298011|ref|XP_002805105.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 769
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 205 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 264
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 265 TVIYNTKNSQPQCIVCVNYVVSGI 288
>gi|114653405|ref|XP_001168972.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 10 [Pan
troglodytes]
gi|410226740|gb|JAA10589.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297974|gb|JAA27587.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344149|gb|JAA40616.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 826
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|355693338|gb|EHH27941.1| hypothetical protein EGK_18259, partial [Macaca mulatta]
Length = 816
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 252 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 311
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 312 TVIYNTKNSQPQCIVCVNYVVSGI 335
>gi|332842389|ref|XP_003339308.1| PREDICTED: hypoxia-inducible factor 1-alpha [Pan troglodytes]
gi|332842391|ref|XP_001169001.2| PREDICTED: hypoxia-inducible factor 1-alpha isoform 11 [Pan
troglodytes]
Length = 850
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVVSGI 369
>gi|332237272|ref|XP_003267829.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Nomascus
leucogenys]
Length = 850
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVVSGI 369
>gi|254973565|gb|ACT98611.1| hypoxia inducible factor 1 subunit alpha [Cloning vector
pCMV-HIF-1a-FLAG]
Length = 848
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|395843414|ref|XP_003794480.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 1 [Otolemur
garnettii]
Length = 827
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|351713876|gb|EHB16795.1| Hypoxia-inducible factor 1 alpha [Heterocephalus glaber]
Length = 832
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 266 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 325
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 326 TVIYNTKNSQPQCIVCVNYVVSGI 349
>gi|290760624|gb|ADD59897.1| hypoxia-inducible factor 2 alpha [Hemiscyllium ocellatum]
Length = 709
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E+LG S Y++YH D D ++ H+ L KG+ + YR L
Sbjct: 203 MKFTYCDERIAALMGYCPEELLGRSVYEFYHALDSDHMIKSHQNLCTKGQSVTGQYRMLA 262
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++W++T+ + Y+ NS+P+ IVC + V+S +
Sbjct: 263 KHGGYVWVETQGTVIYNSRNSQPQCIVCVNYVLSEI 298
>gi|340545531|ref|NP_001230013.1| hypoxia-inducible factor 1-alpha isoform 3 [Homo sapiens]
gi|225354050|gb|ACN88547.1| hypoxia-inducible factor 1 alpha isoform I.3 [Homo sapiens]
Length = 850
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVVSGI 369
>gi|62632235|gb|AAX89137.1| hypoxia inducible factor-1 alpha [Pantholops hodgsonii]
Length = 823
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|361095159|gb|AEW10558.1| HIF-1 alpha [Capra hircus]
Length = 823
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|403264369|ref|XP_003924458.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 2 [Saimiri
boliviensis boliviensis]
Length = 735
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|355694631|gb|AER99736.1| hypoxia inducible factor 1, alpha subunit [Mustela putorius furo]
Length = 823
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|51921791|gb|AAU14021.1| hypoxia-inducible factor 1 alpha subunit [Spermophilus
tridecemlineatus]
Length = 821
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|296215222|ref|XP_002754036.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Callithrix
jacchus]
Length = 735
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|194385580|dbj|BAG65167.1| unnamed protein product [Homo sapiens]
Length = 769
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 205 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 264
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 265 TVIYNTKNSQPQCIVCVNYVVSGI 288
>gi|297298013|ref|XP_002805106.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
gi|297298015|ref|XP_002805107.1| PREDICTED: hypoxia-inducible factor 1-alpha [Macaca mulatta]
Length = 767
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 203 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 262
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 263 TVIYNTKNSQPQCIVCVNYVVSGI 286
>gi|194384556|dbj|BAG59438.1| unnamed protein product [Homo sapiens]
Length = 669
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 196 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 255
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 256 TVIYNTKNSQPQCIVCVNYVVSGI 279
>gi|395504059|ref|XP_003756377.1| PREDICTED: hypoxia-inducible factor 1-alpha [Sarcophilus harrisii]
Length = 811
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|148704554|gb|EDL36501.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_b [Mus
musculus]
Length = 904
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 330 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 389
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 390 TVIYNTKNSQPQCIVCVNYVVS 411
>gi|1389891|gb|AAC52730.1| hypoxia-inducible factor 1 alpha [Mus musculus]
Length = 822
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|114653413|ref|XP_001168948.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 9 [Pan
troglodytes]
gi|410226738|gb|JAA10588.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410297972|gb|JAA27586.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
gi|410344151|gb|JAA40617.1| hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) [Pan troglodytes]
Length = 735
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|403264371|ref|XP_003924459.1| PREDICTED: hypoxia-inducible factor 1-alpha isoform 3 [Saimiri
boliviensis boliviensis]
Length = 850
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 286 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 345
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 346 TVIYNTKNSQPQCIVCVNYVVSGI 369
>gi|431904459|gb|ELK09842.1| Hypoxia-inducible factor 1 alpha, partial [Pteropus alecto]
Length = 873
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 251 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 310
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 311 TVIYNTKNSQPQCIVCVNYVVSGI 334
>gi|13242249|ref|NP_077335.1| hypoxia-inducible factor 1-alpha [Rattus norvegicus]
gi|4580533|gb|AAD24413.1|AF057308_1 hypoxia-inducible factor-1 alpha [Rattus norvegicus]
Length = 823
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVS 344
>gi|340382797|ref|XP_003389904.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Amphimedon queenslandica]
Length = 627
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCH-EALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GYLP +++G + YDY+H DD+ ++ H EA+ Q+ + +YRFL+K ++W+WL +
Sbjct: 357 ILGYLPQDLIGHNSYDYFHPDDMQKMIQLHHEAMKQRTPMPTVHYRFLSKDKKWVWLAMK 416
Query: 86 FYITYHQWNSKPEFIVCTHRV 106
+ + ++ + E++VCT+ V
Sbjct: 417 AFSFVNPFSHQVEYVVCTNVV 437
>gi|148227427|ref|NP_001085718.1| endothelial PAS domain protein 1 [Xenopus laevis]
gi|49118238|gb|AAH73244.1| MGC80589 protein [Xenopus laevis]
Length = 862
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ + +YR L K ++W++T+
Sbjct: 263 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCAKGQVVTGHYRMLAKHGGYLWVETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 323 TVIYNTRNSQPQCIVCVNYVLSEI 346
>gi|417404834|gb|JAA49153.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 823
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|301754491|ref|XP_002913080.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ailuropoda
melanoleuca]
Length = 822
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|130486012|ref|NP_001076251.1| hypoxia-inducible factor 1-alpha [Oryctolagus cuniculus]
gi|31095610|gb|AAP43517.1| hypoxia inducible factor 1 alpha subunit [Oryctolagus cuniculus]
Length = 819
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS 343
>gi|426377113|ref|XP_004055320.1| PREDICTED: hypoxia-inducible factor 1-alpha [Gorilla gorilla
gorilla]
Length = 604
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVSGI 345
>gi|157130624|ref|XP_001661947.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871838|gb|EAT36063.1| AAEL011825-PB [Aedes aegypti]
Length = 753
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 292 LGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQWLQTSSR 351
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+CTHR
Sbjct: 352 LVYK--NSKPDFIICTHR 367
>gi|157130620|ref|XP_001661945.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871836|gb|EAT36061.1| AAEL011825-PC [Aedes aegypti]
Length = 690
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 292 LGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQWLQTSSR 351
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+CTHR
Sbjct: 352 LVYK--NSKPDFIICTHR 367
>gi|149051448|gb|EDM03621.1| hypoxia inducible factor 1, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 521
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|147904360|ref|NP_001085564.1| MGC80468 protein [Xenopus laevis]
gi|49115150|gb|AAH72936.1| MGC80468 protein [Xenopus laevis]
Length = 859
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ + YR L K ++W++T+
Sbjct: 263 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYLWVETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 323 TVIYNTRNSQPQCIVCVNYVLSEI 346
>gi|241562037|ref|XP_002401283.1| aryl hydrocarbon receptor, putative [Ixodes scapularis]
gi|215499835|gb|EEC09329.1| aryl hydrocarbon receptor, putative [Ixodes scapularis]
Length = 674
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY + + GYD H DDL V + H+ L++ G YR TK +W WLQT
Sbjct: 269 LLGYADSDFMSQGGYDLVHFDDLAYVASAHQELLKTGASGLIAYRLSTKDGKWQWLQTSA 328
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+CTHR
Sbjct: 329 RLVYK--NSKPDFILCTHR 345
>gi|121484012|gb|ABM54325.1| HIF1A [Pan paniscus]
Length = 583
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 250 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 310 TVIYNTKNSQPQCIVCVNYVVSGI 333
>gi|432096666|gb|ELK27249.1| Hypoxia-inducible factor 1-alpha [Myotis davidii]
Length = 840
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 203 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 262
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 263 TVIYNTKNSQPQCIVCVNFVVSGI 286
>gi|449504557|ref|XP_002200394.2| PREDICTED: hypoxia-inducible factor 1-alpha [Taeniopygia guttata]
Length = 825
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 276 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQA 335
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 336 TVIYNTKNSQPQCIVCVNYVLS 357
>gi|291290509|dbj|BAI82610.1| brain and muscle ARNT-like protein 1 [Xenopus (Silurana)
tropicalis]
Length = 615
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DD+ + CH+ ++Q E T+C Y+F K
Sbjct: 352 DQRATAILGYLPQELLGTSCYEYFHHDDIGHLADCHKQVLQTREKITTNC-YKFKIKDGS 410
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL 113
+I L++R++ + W + E+IV T+ VVS N+L
Sbjct: 411 FITLKSRWFSFMNPWTKEVEYIVSTNTVVS-ANIL 444
>gi|148235012|ref|NP_001089031.1| uncharacterized protein LOC503673 [Xenopus laevis]
gi|50418074|gb|AAH77551.1| LOC503673 protein [Xenopus laevis]
Length = 627
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DDL ++ CH ++Q E T+C ++F K
Sbjct: 359 DQRATAILGYLPQELLGTSCYEYFHHDDLGNLAECHRQVLQSREKITTNC-FKFKIKDGS 417
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL 113
+I L++R++ + W + E+IV T+ VVS N+L
Sbjct: 418 FITLKSRWFSFMNPWTKEVEYIVSTNTVVS-ANIL 451
>gi|118763938|gb|AAI28807.1| Arntl2 protein [Danio rerio]
Length = 631
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F M+ T D A I+GYLP E+LGTS Y+Y+H+DDL + H +
Sbjct: 347 IKVKPTEFVTRYAMDGKFTFVDQRATTILGYLPQELLGTSCYEYFHLDDLPHLAERHRKV 406
Query: 60 MQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
++ E T+C Y+F TK ++ LQ++++ + W + E+IV T+ VVS
Sbjct: 407 LRSKEKIETNC-YKFKTKYGSFVNLQSQWFSFINPWTKEVEYIVSTNTVVS 456
>gi|124111265|gb|ABM92027.1| HIF1A [Pan troglodytes]
Length = 436
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 186 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 245
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 246 TVIYNTKNSQPQCIVCVNYVVSGI 269
>gi|395508094|ref|XP_003758350.1| PREDICTED: endothelial PAS domain-containing protein 1 [Sarcophilus
harrisii]
Length = 862
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 263 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVISGQYRMLAKHGGYVWLETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 323 TVIYNTRNLQPQCIICVNYVLSEI 346
>gi|157130622|ref|XP_001661946.1| aryl hydrocarbon receptor [Aedes aegypti]
gi|108871837|gb|EAT36062.1| AAEL011825-PA [Aedes aegypti]
Length = 536
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K +W WLQT
Sbjct: 292 LGYSDSELANMGGYDLVHFDDLAYVASAHQELLKTGASGMIAYRYQKKNGEWQWLQTSSR 351
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+CTHR
Sbjct: 352 LVYK--NSKPDFIICTHR 367
>gi|91091736|ref|XP_967876.1| PREDICTED: similar to spineless CG6993-PA [Tribolium castaneum]
gi|270001263|gb|EEZ97710.1| spineless [Tribolium castaneum]
Length = 624
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK QW WLQT
Sbjct: 265 LLGYSDSELATMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGQWQWLQTSS 324
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 325 RLVYK--NSKPDFVISTHR 341
>gi|410919123|ref|XP_003973034.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Takifugu rubripes]
Length = 538
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTK 75
T D A ++GYLP E+LGTS Y+Y+H DDL + H +++ E TSC Y+F TK
Sbjct: 280 TFVDHRATALLGYLPQEILGTSCYEYFHQDDLQHLADKHRQVLRSKEKIETSC-YKFKTK 338
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR-----------RDNNQVPDSE 124
+ LQ++++ + W + EFIV +RV+ N R D +P+
Sbjct: 339 QGSYASLQSQWFSFVNPWTKEVEFIVSLNRVIPGSNQPRDEEPGSSRSFQEDTKHIPEIP 398
Query: 125 EQSNDTGP 132
S +GP
Sbjct: 399 GLSTGSGP 406
>gi|407316766|gb|AFU07565.1| hypoxia-inducible factor 2 alpha subunit [Lepisosteus platostomus]
Length = 851
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D DS+ H+ L KG+ S YR L K ++W++++
Sbjct: 260 LMGYCPEDLLGRSVYEFYHALDSDSMTKSHQNLCTKGQAISGQYRMLAKHGGYVWVESQG 319
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S +
Sbjct: 320 TVIYNSRNSQPQCIVCVNYVLSEI 343
>gi|395543496|ref|XP_003773653.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Sarcophilus harrisii]
Length = 583
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 311 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 369
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VVS NVL + P
Sbjct: 370 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-ANVLESGDPSFP 411
>gi|326921175|ref|XP_003206838.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Meleagris
gallopavo]
Length = 837
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 288 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQA 347
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 348 TVIYNTKNSQPQCIVCVNYVLS 369
>gi|395543498|ref|XP_003773654.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Sarcophilus harrisii]
Length = 613
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VVS NVL + P
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-ANVLESGDPSFP 441
>gi|45383550|ref|NP_989628.1| hypoxia-inducible factor 1-alpha [Gallus gallus]
gi|32469796|sp|Q9YIB9.2|HIF1A_CHICK RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|7594825|dbj|BAA34234.2| hypoxia-inducible factor-1 alpha [Gallus gallus]
Length = 811
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVLS 343
>gi|395543494|ref|XP_003773652.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Sarcophilus harrisii]
Length = 633
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VVS NVL + P
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-ANVLESGDPSFP 461
>gi|395543492|ref|XP_003773651.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Sarcophilus harrisii]
Length = 626
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VVS NVL + P
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-ANVLESGDPSFP 454
>gi|345315439|ref|XP_001510942.2| PREDICTED: hypoxia-inducible factor 1-alpha-like [Ornithorhynchus
anatinus]
Length = 814
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 274 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 333
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 334 TVIYNTKNSQPQCIVCVNYVLS 355
>gi|345122364|gb|AEN74951.1| hypoxia inducible factor 1 alpha subunit [Capra hircus]
Length = 823
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S +YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSISEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWIETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRD 116
+ Y+ NS+P+ IVC + VVS +++RD
Sbjct: 322 TVIYNTKNSQPQCIVCVNYVVS--GIIQRD 349
>gi|197108534|gb|ACH42695.1| spineless [Tribolium castaneum]
Length = 582
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK QW WLQT
Sbjct: 282 LLGYSDSELATMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGQWQWLQTSS 341
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 342 RLVYK--NSKPDFVISTHR 358
>gi|307212674|gb|EFN88377.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Harpegnathos saltator]
Length = 877
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 4 FKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
+P+ F M+ D A P++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 581 LRPIQFVSRHAMDGKFLFVDQRATPVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQ 640
Query: 62 KGEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
E T+ YRF +KG ++ LQ+ + + W E+++ + + + ++ NN
Sbjct: 641 TTERVTTQIYRFRSKGANFVRLQSEWKSFRNPWTKDIEYLIAKNSAI-FCDMRPGGNNGS 699
Query: 121 PDSEEQSN 128
DS Q N
Sbjct: 700 EDSSVQGN 707
>gi|47825375|ref|NP_001001463.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Gallus gallus]
gi|82247579|sp|Q9I8T7.1|BMAL1_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=BMAL1b'; AltName: Full=Brain
and muscle ARNT-like 1; Short=cBMAL1
gi|9651532|gb|AAF91179.1|AF205219_1 clock protein [Gallus gallus]
gi|19773558|gb|AAL98706.1|AF246957_1 BMAL1b' [Gallus gallus]
Length = 633
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS +VL + P DS Q+ +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TSVLDSGDAAFPQLAASPHSMDSVLQAGE 478
Query: 130 TGPGDSN 136
GP S+
Sbjct: 479 GGPKRSH 485
>gi|74223866|dbj|BAE23829.1| unnamed protein product [Mus musculus]
Length = 441
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 263 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VVS +
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVVSGI 346
>gi|449278511|gb|EMC86333.1| Hypoxia-inducible factor 1 alpha, partial [Columba livia]
Length = 801
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 252 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQA 311
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 312 TVIYNTKNSQPQCIVCVNYVLS 333
>gi|126332169|ref|XP_001367705.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Monodelphis domestica]
Length = 626
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VVS NVL + P
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-ANVLESGDPTFP 454
>gi|407316764|gb|AFU07564.1| hypoxia-inducible factor 2 alpha subunit [Acipenser sinensis]
Length = 852
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E+LG S Y++YH D D + H+ L KG+ S YR L
Sbjct: 249 MKFTYCDERVTELMGYWPEELLGRSVYEFYHALDSDRMTKSHQNLCTKGQAVSSQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS P+ IVC + V+S
Sbjct: 309 KHGGYVWVETQGTVIYNTRNSHPQCIVCVNFVLS 342
>gi|318217867|ref|NP_001187163.1| HIF 2 alpha [Ictalurus punctatus]
gi|116829910|gb|ABK27926.1| HIF 2 alpha [Ictalurus punctatus]
Length = 816
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y++YH D +SV H+ L KG+ S +YR L K ++W++T+
Sbjct: 259 LMGYNPEDLLGRSVYEFYHALDSESVTRSHQNLCTKGQAVSGHYRMLAKHGGFVWVETQG 318
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y NS+P+ IVC + V+S +
Sbjct: 319 TVIYSSRNSQPQCIVCVNYVLSDI 342
>gi|432863560|ref|XP_004070127.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oryzias latipes]
Length = 637
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
V KP F M+ T D A ++GYLP E+LGTS Y+Y+H DDL +V H +
Sbjct: 353 VKVKPTEFITRYAMDGKFTFVDQRATTVLGYLPQELLGTSCYEYFHQDDLPHLVDRHRKV 412
Query: 60 MQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY 109
++ + T+C Y+F TK ++ LQ++++ + W + E+IV T+ VVSY
Sbjct: 413 LRSKDKIETNC-YKFKTKYGSFVTLQSQWFSFINPWTKEVEYIVSTNTVVSY 463
>gi|350406507|ref|XP_003487795.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Bombus impatiens]
Length = 737
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 4 FKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
+P+ F M+ D A ++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 439 LRPIKFVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQ 498
Query: 62 KGE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY-VNVLRRDNNQ 119
E T+ YRF TKG ++ LQ+ + + W E+++ + V S + N+
Sbjct: 499 ASECATTQIYRFRTKGASFVKLQSEWKSFRNPWTKDIEYLIAKNSVTSCDSRSITNSGNR 558
Query: 120 VPDSEEQSN 128
DS Q N
Sbjct: 559 SEDSSVQGN 567
>gi|334312813|ref|XP_001382184.2| PREDICTED: endothelial PAS domain-containing protein 1 [Monodelphis
domestica]
Length = 1354
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 755 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVISGQYRMLAKHGGYVWLETQG 814
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 815 TVIYNTRNLQPQCIICVNYVLSEI 838
>gi|449504649|ref|XP_002187659.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Taeniopygia guttata]
Length = 626
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS VL + P DS Q+ +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TTVLDSGDAAFPQLAASPHSMDSVLQAGE 471
Query: 130 TGPGDSN 136
GP S+
Sbjct: 472 GGPKRSH 478
>gi|224052061|ref|XP_002187715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Taeniopygia guttata]
Length = 633
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VVS VL + P DS Q+ +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS-TTVLDSGDAAFPQLAASPHSMDSVLQAGE 478
Query: 130 TGPGDSN 136
GP S+
Sbjct: 479 GGPKRSH 485
>gi|194388958|dbj|BAG61496.1| unnamed protein product [Homo sapiens]
Length = 767
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 203 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 262
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + VV+ +
Sbjct: 263 TVIYNTKNSQPQCIVCVNYVVNGI 286
>gi|449496328|ref|XP_002194260.2| PREDICTED: endothelial PAS domain-containing protein 1 [Taeniopygia
guttata]
Length = 878
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ + YR L K ++WL+T+
Sbjct: 290 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQG 349
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ IVC + V+S +
Sbjct: 350 TVIYNTRNLQPQCIVCVNYVLSEI 373
>gi|410907313|ref|XP_003967136.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Takifugu rubripes]
Length = 638
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 373 DQRATAILGYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNC-YKFKIKDGS 431
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 432 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 461
>gi|340715991|ref|XP_003396488.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Bombus terrestris]
Length = 670
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 4 FKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
+P+ F M+ D A ++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 372 LRPIKFVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQ 431
Query: 62 KGE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY-VNVLRRDNNQ 119
E T+ YRF TKG ++ LQ+ + + W E+++ + V S + N+
Sbjct: 432 ASECATTQIYRFRTKGASFVKLQSEWKSFRNPWTKDIEYLIAKNSVTSCDSRSITNSGNR 491
Query: 120 VPDSEEQSN 128
DS Q N
Sbjct: 492 SEDSSVQGN 500
>gi|83583630|gb|ABC24677.1| hypoxia inducible factor 1 alpha [Carassius carassius]
Length = 776
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++WL+T+
Sbjct: 260 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHNNLFAKGQATTGQYRMLAKKGGFVWLETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|390470249|ref|XP_003734263.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Callithrix jacchus]
Length = 633
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 478
Query: 130 TGPGDSN 136
+GP S+
Sbjct: 479 SGPKRSH 485
>gi|296217591|ref|XP_002755108.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Callithrix jacchus]
gi|390470247|ref|XP_003734262.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Callithrix jacchus]
Length = 626
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGPGDSN 136
+GP S+
Sbjct: 472 SGPKRSH 478
>gi|126697512|gb|ABO26713.1| hypoxia-inducible factor 1 alpha [Aspius aspius]
Length = 773
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H+ L KG+ T+ YR + K ++W++T+
Sbjct: 260 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHQNLFAKGQATTSQYRMMAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNSVLS 341
>gi|242012861|ref|XP_002427145.1| aryl hydrocarbon receptor, putative [Pediculus humanus corporis]
gi|212511416|gb|EEB14407.1| aryl hydrocarbon receptor, putative [Pediculus humanus corporis]
Length = 747
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF T+ QW WLQT
Sbjct: 270 LLGYSDAELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTQNGQWQWLQTSS 329
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 330 RLVYK--NSKPDFVISTHR 346
>gi|449270823|gb|EMC81472.1| Endothelial PAS domain-containing protein 1 [Columba livia]
Length = 874
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ + YR L K ++WL+T+
Sbjct: 265 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQG 324
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ IVC + V+S +
Sbjct: 325 TVIYNTRNLQPQCIVCVNYVLSEI 348
>gi|157649153|gb|ABV59209.1| hypoxia-inducible factor 1 alpha [Cyprinus carpio]
Length = 774
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 260 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV---NVLRRDNNQV--PDSEEQSN 128
+ Y+ NS+P+ IVC + V+S + +V+ V P++EE+ N
Sbjct: 320 TVIYNPKNSQPQCIVCVNFVLSGIVEGDVVLSLQQTVTEPEAEEKEN 366
>gi|443691034|gb|ELT93018.1| hypothetical protein CAPTEDRAFT_190538 [Capitella teleta]
Length = 403
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 3 GFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALM 60
+P FC ++ D I+GYLP E+LGTS Y+YYH D+ + H+A +
Sbjct: 117 AIRPNEFCARHTLDGKFSYVDQRVTAILGYLPQELLGTSAYEYYHFADIPHLSESHKAAL 176
Query: 61 QKGEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQ 119
+ E + YRF K ++ ++TR Y + W + E++VC++ V +L +D++Q
Sbjct: 177 KSREKMETSPYRFKAKSGSFVQMKTRLYSFVNPWTKEMEYLVCSNSV-----ILTQDSSQ 231
Query: 120 VPDSE 124
+ E
Sbjct: 232 PGEGE 236
>gi|126697510|gb|ABO26712.1| hypoxia-inducible factor 1 alpha [Acipenser gueldenstaedtii]
Length = 784
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ + YR L K ++W++T+
Sbjct: 263 LMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVLSGV 346
>gi|407316748|gb|AFU07556.1| hypoxia-inducible factor 1 alpha subunit [Acipenser sinensis]
Length = 763
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ + YR L K ++W++T+
Sbjct: 263 LMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 323 TVIYNTKNSQPQCIVCVNYVLSGV 346
>gi|47207806|emb|CAF89986.1| unnamed protein product [Tetraodon nigroviridis]
Length = 441
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 7 VTFCMSDLMNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE-- 64
VT C D T D A +IGYLP E+LGTS Y+Y+H DDL + H +++ E
Sbjct: 340 VTRCAID-GKFTFIDQRATTVIGYLPQEILGTSCYEYFHQDDLQLLAEKHRQVLRSKERV 398
Query: 65 GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
T C YRF TK ++ LQ++++ + W + EFIV ++V+S
Sbjct: 399 ETPC-YRFKTKPGSYMSLQSQWFSFINPWTKEVEFIVSLNKVIS 441
>gi|58700545|gb|AAW80970.1| BMAL1 [Xenopus laevis]
Length = 627
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C ++F K
Sbjct: 359 DQRATAILGYLPQELLGTSCYEYFHHDDIGHLAECHRQVLQTREKITTNC-FKFKIKDGS 417
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
+I L++R++ + W + E+IV T+ VVS N++ DS T P + N++
Sbjct: 418 FITLKSRWFSFMNPWTKEVEYIVSTNTVVS-ANII-----DAADSTFSHLSTSPPNMNSV 471
>gi|148229316|ref|NP_001089024.1| aryl hydrocarbon receptor nuclear translocator-like [Xenopus
laevis]
gi|50603758|gb|AAH78042.1| ARNTL protein [Xenopus laevis]
Length = 627
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C ++F K
Sbjct: 359 DQRATAILGYLPQELLGTSCYEYFHHDDIGHLAECHRQVLQTREKITTNC-FKFKIKDGS 417
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTI 138
+I L++R++ + W + E+IV T+ VVS N++ DS T P + N++
Sbjct: 418 FITLKSRWFSFMNPWTKEVEYIVSTNTVVS-ANII-----DAADSTFSHLSTSPPNMNSV 471
>gi|269847456|ref|NP_001158488.1| aryl hydrocarbon receptor nuclear translocator-like [Saccoglossus
kowalevskii]
gi|197734681|gb|ACH73236.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Saccoglossus kowalevskii]
Length = 652
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 6 PVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-K 62
P F M+ T D A I+G+LP E+LGTS Y+YYH DD+ + H+A++ K
Sbjct: 331 PTEFVSRHAMDGRFTFVDQRATAILGFLPQELLGTSCYEYYHADDIPPLAESHKAVLAGK 390
Query: 63 GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+ + YRF K +++ ++T+ + + W + E+IVCT+ ++S
Sbjct: 391 DKIMTTVYRFRAKNGKFVKMRTKSFCFRNPWTKEVEYIVCTNTLIS 436
>gi|291386847|ref|XP_002709777.1| PREDICTED: endothelial PAS domain protein 1 [Oryctolagus cuniculus]
Length = 1006
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 404 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 463
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 464 TVIYNPRNLQPQCIMCVNYVLSEI 487
>gi|32469606|sp|O35800.1|HIF1A_RAT RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|2632131|emb|CAA70701.1| hypoxia-inducible factor 1 [Rattus norvegicus]
Length = 825
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ +S+P+ IVC + VVS
Sbjct: 322 TVIYNTKDSQPQCIVCVNYVVS 343
>gi|321117672|gb|ADW54531.1| hypoxia-inducible factor-1alpha [Cyprinus carpio]
Length = 719
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 227 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 286
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV---NVLRRDNNQV--PDSEEQSN 128
+ Y+ NS+P+ IVC + V+S + +V+ V P++EE+ N
Sbjct: 287 TVIYNPKNSQPQCIVCVNFVLSGIVEGDVVLSLQQTVTEPEAEEKEN 333
>gi|380039564|gb|AFD32326.1| hypoxia-inducible factor 2 alpha, partial [Acipenser persicus]
Length = 183
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E+LG S Y++YH D DS+ H+ L KG+ S YR L
Sbjct: 88 MKFTYCDERVTELMGYWPEELLGRSVYEFYHALDSDSMTKSHQNLCTKGQAVSSQYRMLA 147
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++WL + + Y+ NS P+ IVC + V+S V
Sbjct: 148 KHGGYVWLVAQGTVIYNTRNSHPQCIVCVNYVLSEV 183
>gi|348559904|ref|XP_003465755.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Cavia porcellus]
Length = 582
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLESGDPSFPQLTVSPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|301614622|ref|XP_002936788.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Xenopus (Silurana) tropicalis]
Length = 472
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+GYLP E+LGTS Y+Y+H DD+ + CH+ ++Q E T+C Y+F K
Sbjct: 203 DQRATAILGYLPQELLGTSCYEYFHHDDIGHLADCHKQVLQTREKITTNC-YKFKIKDGS 261
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL 113
+I L++R++ + W + E+IV T+ VVS N+L
Sbjct: 262 FITLKSRWFSFMNPWTKEVEYIVSTNTVVS-ANIL 295
>gi|444705900|gb|ELW47278.1| Endothelial PAS domain-containing protein 1 [Tupaia chinensis]
Length = 833
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 208 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 267
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV-----PDSEEQSND 129
+ Y+ N +P+ I+C + V+ N R + P SE + ND
Sbjct: 268 TVIYNPRNLQPQCIMCVNYVLRVQNNSDRKCERTQQLFCPISEIEKND 315
>gi|58272373|gb|AAW69834.1| hypoxia-inducible factor 1 alpha [Gymnocypris przewalskii]
Length = 773
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 260 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV---NVLRRDNNQV--PDSEEQSN 128
+ Y+ NS+P+ IVC + V+S + +V+ V P +EE+ N
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVTEPKAEEKEN 366
>gi|348559906|ref|XP_003465756.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 3 [Cavia porcellus]
Length = 613
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLESGDPSFPQLTVSPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|407316752|gb|AFU07558.1| hypoxia-inducible factor 1 alpha subunit [Gymnocypris namensis]
Length = 774
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 261 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 320
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV---NVLRRDNNQV--PDSEEQSN 128
+ Y+ NS+P+ IVC + V+S + +V+ V P +EE+ N
Sbjct: 321 TVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVTEPKAEEKEN 367
>gi|348559902|ref|XP_003465754.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Cavia porcellus]
Length = 626
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLESGDPSFPQLTVSPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|390358832|ref|XP_003729347.1| PREDICTED: uncharacterized protein LOC100891430 [Strongylocentrotus
purpuratus]
Length = 1248
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P EV+G + Y +++ D V CH L+ KG S YYRFL K W+W+QT+
Sbjct: 293 LVGYEPHEVIGKTAYQFHNPLDARKVSDCHSKLIVKGSSMSKYYRFLGKLGAWVWMQTKA 352
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
I Y+ N+ +++VC + V+
Sbjct: 353 TIIYN-TNNVAQYVVCMNYVI 372
>gi|380039560|gb|AFD32324.1| hypoxia-inducible factor 2 alpha B, partial [Aspius aspius]
Length = 472
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++ H D +S+ H+ L KG+ S YR L K ++W++T+
Sbjct: 207 LIGYRPEELLGRSMYEFCHALDSESMTKSHQNLCNKGQVVSGQYRMLAKQGGYVWVETQA 266
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
+ Y+ NS+P+ I+C + V+S V
Sbjct: 267 TVIYNNRNSQPQCIICINYVLSSVE 291
>gi|325513895|gb|ADZ23996.1| hypoxia-inducible factor 3a [Myxocyprinus asiaticus]
Length = 632
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V + L KG+ + +YRFL K ++W +T+
Sbjct: 255 LVGYEPDDLIGRSAYEFYHALDFDHVTSSLHILFSKGQVCTSHYRFLAKNGGFVWTETQA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSND 129
+ Y+ S+PE +VC + ++S V + V S EQ++D
Sbjct: 315 TVLYNSRTSQPEAVVCLNFILSGV-----EQADVVFSLEQTSD 352
>gi|300794072|ref|NP_001178099.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Bos
taurus]
gi|296480174|tpg|DAA22289.1| TPA: aryl hydrocarbon receptor nuclear translocator-like [Bos
taurus]
Length = 626
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQSREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPSFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|432949739|ref|XP_004084234.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Oryzias latipes]
Length = 622
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD++ + CH ++Q E T+C Y+F K
Sbjct: 357 DQRATAILAYLPQELLGTSFYEYFHQDDINHLAECHRQVLQMREKINTNC-YKFKIKDGS 415
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ +VS
Sbjct: 416 FITLRSRWFSFMNPWTKEVEYIVSTNTIVS 445
>gi|158299340|ref|XP_001238158.2| AGAP010259-PA [Anopheles gambiae str. PEST]
gi|157014317|gb|EAU76143.2| AGAP010259-PA [Anopheles gambiae str. PEST]
Length = 955
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K W WLQT
Sbjct: 295 LGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQWLQTSSR 354
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 355 LVY--KNSKPDFVICTHR 370
>gi|417403449|gb|JAA48528.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 626
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPSFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|37499124|gb|AAQ91619.1| hypoxia inducible factor 1 alpha [Danio rerio]
Length = 777
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 322 TVIYNPKNSQPQCIVCVNYVLS 343
>gi|354503088|ref|XP_003513613.1| PREDICTED: endothelial PAS domain-containing protein 1 [Cricetulus
griseus]
gi|344258028|gb|EGW14132.1| Endothelial PAS domain-containing protein 1 [Cricetulus griseus]
Length = 878
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 268 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 327
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 328 TVIYNPRNLQPQCIMCVNYVLSEI 351
>gi|440913142|gb|ELR62630.1| hypothetical protein M91_01346 [Bos grunniens mutus]
Length = 644
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQSREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPSFPQLTASPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|109689226|dbj|BAE96767.1| arylhydrocarbon receptor homolog b isoform [Anopheles stephensi]
Length = 538
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K W WLQT
Sbjct: 295 LGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQWLQTSSR 354
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 355 LVYK--NSKPDFVICTHR 370
>gi|38374005|gb|AAR19225.1| hypoxia-inducible factor 1 alpha subunit [Canis lupus familiaris]
Length = 786
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 242 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 301
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ I C + VVS +
Sbjct: 302 TVIYNTKNSQPQCIGCVNYVVSGI 325
>gi|239937484|ref|NP_001123206.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Ovis
aries]
gi|152940833|gb|ABS44881.1| aryl hydrocarbon receptor nuclear translocator-like protein [Ovis
aries]
Length = 626
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPSFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|46048879|ref|NP_990138.1| endothelial PAS domain-containing protein 1 [Gallus gallus]
gi|5051910|gb|AAD38358.1|AF129813_1 endothelial PAS domain protein 1 [Gallus gallus]
Length = 867
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ + YR L K ++WL+T+
Sbjct: 263 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 323 TVIYNTRNLQPQCIICVNYVLSEI 346
>gi|354503574|ref|XP_003513856.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Cricetulus griseus]
Length = 539
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|41053885|ref|NP_956527.1| hypoxia-inducible factor 1-alpha [Danio rerio]
gi|28422764|gb|AAH46875.1| Hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix
transcription factor) b [Danio rerio]
gi|182892028|gb|AAI65712.1| Hif1ab protein [Danio rerio]
Length = 533
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 262 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 322 TVIYNPKNSQPQCIVCVNYVLS 343
>gi|158299342|ref|XP_319448.3| AGAP010259-PB [Anopheles gambiae str. PEST]
gi|157014318|gb|EAA14168.4| AGAP010259-PB [Anopheles gambiae str. PEST]
Length = 539
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K W WLQT
Sbjct: 295 LGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQWLQTSSR 354
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 355 LVYK--NSKPDFVICTHR 370
>gi|71896600|ref|NP_077338.2| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Rattus norvegicus]
gi|71681125|gb|AAH99833.1| Aryl hydrocarbon receptor nuclear translocator-like [Rattus
norvegicus]
gi|149068249|gb|EDM17801.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
gi|149068250|gb|EDM17802.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
Length = 626
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|149068248|gb|EDM17800.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Rattus norvegicus]
Length = 633
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|146345378|sp|Q9EPW1.4|BMAL1_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1;
AltName: Full=Tic
Length = 626
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|345309562|ref|XP_001520546.2| PREDICTED: endothelial PAS domain-containing protein 1-like,
partial [Ornithorhynchus anatinus]
Length = 511
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 4 LIGYHPEELLGRSAYEFYHALDSESMTKSHQNLCAKGQVVSGQYRMLAKLGGYVWLETQG 63
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I C + V+S +
Sbjct: 64 TVIYNTRNLQPQCIFCVNYVLSEI 87
>gi|149068251|gb|EDM17803.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Rattus norvegicus]
Length = 613
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|119588909|gb|EAW68503.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Homo sapiens]
Length = 625
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 352 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 410
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 411 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 469
Query: 130 TGP 132
GP
Sbjct: 470 GGP 472
>gi|432949737|ref|XP_004084233.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Oryzias latipes]
Length = 639
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD++ + CH ++Q E T+C Y+F K
Sbjct: 374 DQRATAILAYLPQELLGTSFYEYFHQDDINHLAECHRQVLQMREKINTNC-YKFKIKDGS 432
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ +VS
Sbjct: 433 FITLRSRWFSFMNPWTKEVEYIVSTNTIVS 462
>gi|426367514|ref|XP_004050776.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Gorilla gorilla gorilla]
Length = 624
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 352 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 410
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 411 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 469
Query: 130 TGP 132
GP
Sbjct: 470 GGP 472
>gi|1695803|gb|AAC51213.1| MOP3 [Homo sapiens]
Length = 624
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 352 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 410
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 411 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 469
Query: 130 TGP 132
GP
Sbjct: 470 GGP 472
>gi|340007432|ref|NP_001229977.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 2 [Mus musculus]
gi|15029728|gb|AAH11080.1| Arntl protein [Mus musculus]
gi|148685094|gb|EDL17041.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Mus musculus]
Length = 613
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|4586558|dbj|BAA76414.1| BMAL1b' [Mus musculus]
Length = 632
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 360 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 418
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 419 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 477
Query: 130 TGP 132
GP
Sbjct: 478 GGP 480
>gi|410973227|ref|XP_003993056.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Felis catus]
Length = 613
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|6680732|ref|NP_031515.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 1 [Mus musculus]
gi|3402483|dbj|BAA32208.1| Arnt3 [Mus musculus]
gi|19683934|gb|AAH25973.1| Aryl hydrocarbon receptor nuclear translocator-like [Mus musculus]
gi|74144664|dbj|BAE27317.1| unnamed protein product [Mus musculus]
gi|74151184|dbj|BAE27714.1| unnamed protein product [Mus musculus]
gi|148685095|gb|EDL17042.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Mus musculus]
Length = 626
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|2104216|dbj|BAA19968.1| BMAL1a [Homo sapiens]
gi|71052191|gb|AAH31214.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|112180372|gb|AAH16674.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588917|gb|EAW68511.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_h
[Homo sapiens]
gi|410222710|gb|JAA08574.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253946|gb|JAA14940.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301880|gb|JAA29540.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335573|gb|JAA36733.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 583
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 311 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 369
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 370 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 428
Query: 130 TGP 132
GP
Sbjct: 429 GGP 431
>gi|3668183|dbj|BAA33450.1| BMAL1b [Rattus norvegicus]
Length = 626
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|5360228|dbj|BAA81898.1| BMAL1b [Mus musculus]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|417405041|gb|JAA49246.1| Putative transcriptional regulator sim1 [Desmodus rotundus]
Length = 870
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +S+ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LVGYHPEELLGRSAYEFYHALDSESMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|147898769|ref|NP_001090894.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Sus
scrofa]
gi|124495049|gb|ABN13601.1| BMAL1 [Sus scrofa]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAKCHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|71852582|ref|NP_001025444.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform b [Homo sapiens]
gi|426367510|ref|XP_004050774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|119588911|gb|EAW68505.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Homo sapiens]
gi|121646995|gb|ABM64205.1| aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|193788226|dbj|BAG53120.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|49532661|dbj|BAD26600.1| BMAL1b [Mus musculus]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|49532660|dbj|BAD26599.1| BMAL1b' [Mus musculus]
Length = 633
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|34098759|sp|Q9WTL8.2|BMAL1_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Arnt3; AltName: Full=Brain and
muscle ARNT-like 1
gi|148685096|gb|EDL17043.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Mus musculus]
Length = 632
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 360 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 418
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 419 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTAPPHSMDSMLPSGE 477
Query: 130 TGP 132
GP
Sbjct: 478 GGP 480
>gi|410973231|ref|XP_003993058.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Felis catus]
Length = 582
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|34098389|sp|O88529.1|BMAL1_MESAU RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|3228689|gb|AAC23606.1| bHLH-PAS transcription factor [Mesocricetus auratus]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|326915260|ref|XP_003203937.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Meleagris gallopavo]
Length = 944
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ + YR L K ++WL+T+
Sbjct: 339 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQG 398
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 399 TVIYNTRNLQPQCIICVNYVLSEI 422
>gi|18858359|ref|NP_571652.1| aryl hydrocarbon receptor nuclear translocator-like 1a [Danio
rerio]
gi|7595268|gb|AAF64394.1|AF144689_1 Bmal1 [Danio rerio]
gi|7595270|gb|AAF64395.1|AF144690_1 Bmal1 [Danio rerio]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 358 DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKISTNC-YKFKIKDGS 416
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 417 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 446
>gi|321117678|gb|ADW54534.1| hypoxia-inducible factor-1alpha [Carassius auratus]
Length = 725
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 233 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 292
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 293 TVIYNPKNSQPQCIVCVNYVLS 314
>gi|318997430|ref|NP_001187230.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
gi|73426661|gb|AAZ75952.1| hypoxia induced factor 1 alpha [Ictalurus punctatus]
Length = 776
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 264 LMGYEPDELLNRSVYEYYHALDSDHLSKTHHNLFAKGQVTTGQYRMLAKKAGYVWVETQA 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ +VC + V+S +
Sbjct: 324 TVIYNPKNSQPQCVVCVNYVLSGI 347
>gi|410044848|ref|XP_003951888.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 613
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|403254272|ref|XP_003919897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 582
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|351714673|gb|EHB17592.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Heterocephalus glaber]
Length = 627
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|288887164|gb|ADC55890.1| hypoxia inducible factor-1alpha [Pseudochaenichthys georgianus]
Length = 686
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S YDYYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ IVC + V+S + ++ S EQ D P
Sbjct: 310 KRGGFVWVETQATVIYNNKNSQPQCIVCVNFVLSDIQ-----EEKLVLSLEQMEDVKP 362
>gi|288887156|gb|ADC55886.1| hypoxia inducible factor-1alpha [Champsocephalus gunnari]
Length = 666
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S YDYYH D D + H L KG+ ++ YR L
Sbjct: 249 MKFTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ IVC + V+S + ++ S EQ D P
Sbjct: 309 KRGGFVWVETQATVIYNNKNSQPQCIVCVNFVLSGIQ-----EEKLVLSLEQMEDVKP 361
>gi|149068252|gb|EDM17804.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_d
[Rattus norvegicus]
gi|149068253|gb|EDM17805.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_d
[Rattus norvegicus]
Length = 595
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 323 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 381
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 382 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 440
Query: 130 TGP 132
GP
Sbjct: 441 GGP 443
>gi|119588915|gb|EAW68509.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_g
[Homo sapiens]
Length = 614
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|441646084|ref|XP_003255011.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Nomascus leucogenys]
Length = 613
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 341 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 399
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 400 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 458
Query: 130 TGP 132
GP
Sbjct: 459 GGP 461
>gi|3211720|gb|AAC21449.1| TIC [Rattus norvegicus]
Length = 590
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 318 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 376
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 377 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 435
Query: 130 TGP 132
GP
Sbjct: 436 GGP 438
>gi|197099616|ref|NP_001126900.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Pongo abelii]
gi|75070447|sp|Q5R4T2.1|BMAL1_PONAB RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|55733099|emb|CAH93234.1| hypothetical protein [Pongo abelii]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPRSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|345787826|ref|XP_003432972.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Canis lupus familiaris]
Length = 583
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|348503838|ref|XP_003439469.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Oreochromis niloticus]
Length = 620
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 355 DQRATAILAYLPQELLGTSFYEYFHQDDISHLAECHRQVLQMREKINTNC-YKFKIKDGS 413
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 414 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 443
>gi|345486455|ref|XP_001607569.2| PREDICTED: hypothetical protein LOC100123827 [Nasonia vitripennis]
Length = 903
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK W WLQT
Sbjct: 289 LLGYSDSELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDAGWQWLQTSS 348
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 349 RLVYK--NSKPDFVISTHR 365
>gi|307183517|gb|EFN70296.1| Aryl hydrocarbon receptor [Camponotus floridanus]
Length = 750
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK W WLQT
Sbjct: 113 LLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQWLQTSS 172
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 173 RLVYK--NSKPDFVLSTHR 189
>gi|115349961|gb|ABI95426.1| brain and muscle ARNT-like 1 protein [Haplochromis burtoni]
Length = 620
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 355 DQRATAILAYLPQELLGTSFYEYFHQDDISHLAECHRQVLQMREKINTNC-YKFKIKDGS 413
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 414 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 443
>gi|410973229|ref|XP_003993057.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Felis catus]
Length = 633
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|410973225|ref|XP_003993055.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Felis catus]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|189054791|dbj|BAG37615.1| unnamed protein product [Homo sapiens]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|383872274|ref|NP_001244766.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Macaca mulatta]
gi|355566711|gb|EHH23090.1| Brain and muscle ARNT-like 1 [Macaca mulatta]
gi|355752314|gb|EHH56434.1| Brain and muscle ARNT-like 1 [Macaca fascicularis]
gi|380812758|gb|AFE78253.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418371|gb|AFH32399.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418373|gb|AFH32400.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|81916240|sp|Q91YA9.1|BMAL1_SPAGA RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|16549046|emb|CAC85406.1| MOP3 protein [Spalax galili]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|441646081|ref|XP_004090715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Nomascus leucogenys]
Length = 633
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|441646078|ref|XP_003255009.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Nomascus leucogenys]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|327280975|ref|XP_003225226.1| PREDICTED: endothelial PAS domain-containing protein 1-like [Anolis
carolinensis]
Length = 871
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ + YR L K ++WL+T+
Sbjct: 263 LVGYHPDELLGRSAYEFYHALDSENMTKSHQNLCAKGQVVTGQYRMLAKHGGYVWLETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 323 TVIYNTRNLQPQCIICVNYVLSEI 346
>gi|28279879|gb|AAH44135.1| Arntl1a protein [Danio rerio]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQW 79
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q +G+ ++ Y+F K +
Sbjct: 358 DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMRGKISTNCYKFKIKDGSF 417
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
I L++R++ + W + E+IV T+ VVS
Sbjct: 418 ITLRSRWFSFMNPWTKEVEYIVSTNTVVS 446
>gi|2094735|dbj|BAA19935.1| BMAL1b [Homo sapiens]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|403254270|ref|XP_003919896.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|384942802|gb|AFI35006.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|384942804|gb|AFI35007.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|307200794|gb|EFN80847.1| Aryl hydrocarbon receptor [Harpegnathos saltator]
Length = 704
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK W WLQT
Sbjct: 140 LLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQWLQTSS 199
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 200 RLVYK--NSKPDFVLSTHR 216
>gi|119588918|gb|EAW68512.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_i
[Homo sapiens]
Length = 627
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|397494731|ref|XP_003818225.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Pan paniscus]
gi|410044844|ref|XP_001171687.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 3 [Pan troglodytes]
gi|33860123|sp|O00327.2|BMAL1_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP3; AltName: Full=Brain and muscle ARNT-like
1; AltName: Full=Class E basic helix-loop-helix protein
5; Short=bHLHe5; AltName: Full=Member of PAS protein 3;
AltName: Full=PAS domain-containing protein 3; AltName:
Full=bHLH-PAS protein JAP3
gi|1698576|gb|AAB37248.1| bHLH-PAS protein JAP3 [Homo sapiens]
gi|3170267|gb|AAC24353.1| basic-helix-loop-helix-PAS orphan MOP3 [Homo sapiens]
gi|119588910|gb|EAW68504.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|119588916|gb|EAW68510.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|158256452|dbj|BAF84199.1| unnamed protein product [Homo sapiens]
gi|261858376|dbj|BAI45710.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|410222708|gb|JAA08573.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410222712|gb|JAA08575.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253944|gb|JAA14939.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253948|gb|JAA14941.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301876|gb|JAA29538.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301878|gb|JAA29539.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335571|gb|JAA36732.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335575|gb|JAA36734.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|42716311|ref|NP_001169.3| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|71852580|ref|NP_001025443.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|410044846|ref|XP_003951887.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367508|ref|XP_004050773.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|37589937|gb|AAH41129.2| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588919|gb|EAW68513.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_j
[Homo sapiens]
gi|167773115|gb|ABZ91992.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|325463663|gb|ADZ15602.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
Length = 625
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|397494733|ref|XP_003818226.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Pan paniscus]
gi|410044850|ref|XP_003951889.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367512|ref|XP_004050775.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Gorilla gorilla gorilla]
Length = 633
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 420 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 478
Query: 130 TGP 132
GP
Sbjct: 479 GGP 481
>gi|395815282|ref|XP_003781160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Otolemur garnettii]
Length = 582
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 310 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 368
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 369 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 427
Query: 130 TGP 132
GP
Sbjct: 428 GGP 430
>gi|332018425|gb|EGI59019.1| Aryl hydrocarbon receptor [Acromyrmex echinatior]
Length = 759
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF TK W WLQT
Sbjct: 113 LLGYSDAELTNLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTKDGGWQWLQTSS 172
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 173 RLVYK--NSKPDFVLSTHR 189
>gi|126352624|ref|NP_001075390.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Equus caballus]
gi|150385716|sp|A0MLS5.1|BMAL1_HORSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|116256287|gb|ABJ90473.1| brain and muscle ARNT-like protein 1 [Equus caballus]
Length = 626
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|332023709|gb|EGI63933.1| Single-minded-like protein 1 [Acromyrmex echinatior]
Length = 688
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D P+ GY P +++ + Y Y H D+ + H L++KG+ T+ YYRFLTK W+
Sbjct: 257 DARVTPLTGYEPPDLIEKTLYHYVHACDILQLRHAHHVLLRKGQVTTRYYRFLTKTGGWV 316
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGD 134
W+Q+ I ++ +S+P IV V+YV + V + E++S+ + PG+
Sbjct: 317 WMQSYVTIVHNSRSSRPHCIVS----VNYVLTATENTGLVLNCEQKSSCSSPGN 366
>gi|294961108|gb|ADF50045.1| hypoxia-inducible factor 3 alpha [Megalobrama amblycephala]
Length = 643
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V L KG+ + +YRFL K +IW +T+
Sbjct: 255 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFIWTETQA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 315 TVLYNSRTSQPEAVVCLNFILSGV 338
>gi|383860213|ref|XP_003705585.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Megachile rotundata]
Length = 899
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 4 FKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
+P+ F M+ D A ++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 600 LRPIKFVSRHAMDGKFLFVDQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAKSHKAALQ 659
Query: 62 KGEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY-VNVLRRDNNQ 119
E T+ YRF TKG ++ LQ+ + + W E+++ + V S + N+
Sbjct: 660 ATECITTQIYRFRTKGASFVRLQSEWKSFRNPWTKDIEYLIAKNSVTSCDSRSITNSGNR 719
Query: 120 VPDSEEQSN 128
DS Q N
Sbjct: 720 SEDSSVQGN 728
>gi|326672423|ref|XP_695262.5| PREDICTED: endothelial PAS domain-containing protein 1 [Danio
rerio]
Length = 810
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++ H D +++ H+ L KG+ S YR L K ++W++T+
Sbjct: 263 LIGYRPEELLGRSVYEFCHALDSENMTKSHQNLCNKGQVVSGQYRMLAKNGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ I+C + ++S V
Sbjct: 323 TVIYNNRNSQPQCIICINYILSSV 346
>gi|148228022|ref|NP_001090889.1| endothelial PAS domain-containing protein 1 [Sus scrofa]
gi|125634700|gb|ABN48508.1| hypoxia-inducible factor 2 alpha [Sus scrofa]
Length = 871
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVP 121
+ Y+ N +P+ I+C + V+S + V D + P
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESP 362
>gi|427930992|pdb|4H6J|A Chain A, Identification Of Cys 255 In Hif-1 As A Novel Site For
Development Of Covalent Inhibitors Of Hif-1 ARNT PASB
DOMAIN PROTEIN-Protein Interaction
Length = 113
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+
Sbjct: 27 LMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQA 86
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + VVS
Sbjct: 87 TVIYNTKNSQPQCIVCVNYVVS 108
>gi|345787824|ref|XP_851850.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Canis lupus familiaris]
Length = 626
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|407316746|gb|AFU07555.1| hypoxia-inducible factor 1 alpha subunit [Hypophthalmichthys
nobilis]
Length = 774
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 260 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|300087115|gb|ADJ67806.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 774
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 260 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|355686181|gb|AER97972.1| endothelial PAS domain protein 1 [Mustela putorius furo]
Length = 859
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 255 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
+ Y+ N +P+ I+C + V+S +
Sbjct: 315 TVIYNPRNLQPQCIMCVNYVLSEIE 339
>gi|119588914|gb|EAW68508.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_f
[Homo sapiens]
Length = 596
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 323 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 381
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 382 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 440
Query: 130 TGP 132
GP
Sbjct: 441 GGP 443
>gi|288887160|gb|ADC55888.1| hypoxia inducible factor-1alpha [Chaenocephalus aceratus]
Length = 530
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S YDYYH D D + H L KG+ ++ YR L
Sbjct: 201 MKFTYCDERITELMGYDPEDLLNRSVYDYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLA 260
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ IVC + V+S + ++ S EQ D P
Sbjct: 261 KRGGFVWVETQATVIYNNKNSQPQCIVCVNFVLSGIQ-----EEKLVLSLEQMEDVKP 313
>gi|395815284|ref|XP_003781161.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Otolemur garnettii]
Length = 632
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 360 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 418
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 419 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 477
Query: 130 TGP 132
GP
Sbjct: 478 GGP 480
>gi|1695801|gb|AAC51212.1| MOP2 [Homo sapiens]
Length = 870
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|30231256|ref|NP_840085.1| aryl hydrocarbon receptor nuclear translocator-like 1b [Danio
rerio]
gi|21685554|dbj|BAC02688.1| bHLH-PAS transcription factor [Danio rerio]
Length = 622
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T C Y+F K
Sbjct: 356 DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTHC-YKFKIKDGS 414
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 415 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 444
>gi|407316788|gb|AFU07576.1| hypoxia-inducible factor 3 alpha subunit [Schizothorax prenanti]
Length = 628
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V L KG+ + +YRFL K ++W +T+
Sbjct: 253 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQA 312
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 313 TVLYNSRTSQPEAVVCLYFILSGV 336
>gi|297374832|ref|NP_001165655.1| hypoxia-inducible factor 1-alpha [Xenopus laevis]
gi|32469782|sp|Q9I8A9.1|HIF1A_XENLA RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|8953675|emb|CAB96628.1| hypoxia inducible factor 1 alpha [Xenopus laevis]
Length = 805
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y+YYH D D + + + KG+ T+ YR L K ++W++T+
Sbjct: 263 LVGYEPDELLGRSVYEYYHALDSDHLTKPNYNMFTKGQVTTGQYRMLAKKGGYVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ NS+P+ IVC + V+S V
Sbjct: 323 TVIYNSKNSQPQCIVCVNYVLSEV 346
>gi|395815280|ref|XP_003781159.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Otolemur garnettii]
Length = 625
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W + E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|355565669|gb|EHH22098.1| hypothetical protein EGK_05296 [Macaca mulatta]
gi|355751289|gb|EHH55544.1| hypothetical protein EGM_04774 [Macaca fascicularis]
gi|384945768|gb|AFI36489.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
gi|384945770|gb|AFI36490.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|109689224|dbj|BAE96766.1| arylhydrocarbon receptor homolog a isoform [Anopheles stephensi]
Length = 981
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY E+ GYD H DDL V + H+ L++ G YR+ K W WLQT
Sbjct: 295 LGYSDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRYQKKDGAWQWLQTSSR 354
Query: 88 ITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++CTHR
Sbjct: 355 LVYK--NSKPDFVICTHR 370
>gi|294961104|gb|ADF50043.1| hypoxia-inducible factor 1 alpha [Megalobrama amblycephala]
Length = 774
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 260 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|380810424|gb|AFE77087.1| endothelial PAS domain-containing protein 1 [Macaca mulatta]
Length = 869
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|297265931|ref|XP_001112947.2| PREDICTED: endothelial PAS domain-containing protein 1 isoform 3
[Macaca mulatta]
Length = 832
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 227 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 286
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 287 TVIYNPRNLQPQCIMCVNYVLSEI 310
>gi|134024857|gb|AAI34896.1| Arntl1b protein [Danio rerio]
Length = 645
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T C Y+F K
Sbjct: 379 DQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTHC-YKFKIKDGS 437
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
+I L++R++ + W + E+IV T+ VVS
Sbjct: 438 FITLRSRWFSFMNPWTKEVEYIVSTNTVVS 467
>gi|166343753|gb|ABY86627.1| hypoxia-inducible factor 1 alpha [Hemiscyllium ocellatum]
Length = 816
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+LG S Y++YH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 261 LMGYQAEELLGRSVYEFYHALDSDHLTKTHHDLFTKGQATTGQYRMLGKEGGYVWVETQA 320
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 321 TVIYNSKNSQPQCIVCVNYVLS 342
>gi|410898074|ref|XP_003962523.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 755
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ + YR L K ++WL+T+
Sbjct: 262 LMGYEPEDLLNRSVYEYYHAQDSDHLAKTHHNLFAKGQVCTGQYRMLAKRGGFVWLETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
+ Y+ NS+P+ +VC + V+S + ++ S EQ+ D P
Sbjct: 322 TVIYNTKNSQPQCVVCVNFVLSGIQ-----EEKMVLSLEQTADVKP 362
>gi|7839662|gb|AAF70378.1|AF261769_1 aryl hydrocarbon receptor-like protein [Mya arenaria]
Length = 852
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY ++ SGYD H DDL+ H L++ G YR+LTK QWIWLQ+
Sbjct: 289 MFGYGDRDLATRSGYDLIHPDDLNYFAAAHGELIKTGSAGLIAYRWLTKDLQWIWLQSSC 348
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y NSKP+F++ THR ++
Sbjct: 349 KVIYK--NSKPDFVIATHRQLT 368
>gi|40254439|ref|NP_001421.2| endothelial PAS domain-containing protein 1 [Homo sapiens]
gi|32470617|sp|Q99814.3|EPAS1_HUMAN RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP2; AltName: Full=Class E basic
helix-loop-helix protein 73; Short=bHLHe73; AltName:
Full=HIF-1-alpha-like factor; Short=HLF; AltName:
Full=Hypoxia-inducible factor 2-alpha;
Short=HIF-2-alpha; Short=HIF2-alpha; AltName:
Full=Member of PAS protein 2; AltName: Full=PAS
domain-containing protein 2
gi|30410995|gb|AAH51338.1| Endothelial PAS domain protein 1 [Homo sapiens]
gi|119620660|gb|EAX00255.1| endothelial PAS domain protein 1 [Homo sapiens]
gi|168277630|dbj|BAG10793.1| endothelial PAS domain-containing protein 1 [synthetic construct]
Length = 870
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|120419452|gb|ABM21545.1| endothelial PAS domain protein 1 [Bos taurus]
Length = 462
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 265 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 324
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVP 121
+ Y+ N +P+ I+C + V+S + V D + P
Sbjct: 325 TVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESP 363
>gi|1805268|gb|AAB41495.1| endothelial PAS domain protein 1 [Homo sapiens]
Length = 870
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|297667706|ref|XP_002812111.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pongo
abelii]
Length = 869
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|296223954|ref|XP_002757844.1| PREDICTED: endothelial PAS domain-containing protein 1 [Callithrix
jacchus]
Length = 867
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|114577233|ref|XP_001147219.1| PREDICTED: endothelial PAS domain-containing protein 1 isoform 4
[Pan troglodytes]
gi|410265254|gb|JAA20593.1| endothelial PAS domain protein 1 [Pan troglodytes]
gi|410350683|gb|JAA41945.1| endothelial PAS domain protein 1 [Pan troglodytes]
Length = 870
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|62822155|gb|AAY14704.1| unknown [Homo sapiens]
Length = 861
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 255 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 315 TVIYNPRNLQPQCIMCVNYVLSEI 338
>gi|397504232|ref|XP_003822706.1| PREDICTED: endothelial PAS domain-containing protein 1 [Pan
paniscus]
Length = 870
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|288887158|gb|ADC55887.1| hypoxia inducible factor-1alpha [Notothenia coriiceps]
Length = 658
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 249 MKFTYCDERITELMGYDPDDLLNRSVYEYYHAMDSDHLTKTHHNLFAKGQVSTGQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGD 134
K ++W++T+ + Y+ NS+P+ IVC + V+S + + ++ S EQ D P D
Sbjct: 309 KRGGFVWVETQATVIYNNKNSQPQCIVCLNFVLSGIQ-----DEKLVLSLEQMEDVKPVD 363
>gi|443731985|gb|ELU16881.1| hypothetical protein CAPTEDRAFT_121312, partial [Capitella teleta]
Length = 107
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
+P FC ++ D I+GYLP E+LGTS Y+YYH D+ + H+A ++
Sbjct: 1 RPNEFCARHTLDGKFSYVDQRVTAILGYLPQELLGTSAYEYYHFADIPHLSESHKAALKS 60
Query: 63 GEGTSCY-YRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
E YRF K ++ ++TR Y + W + E++VC++ V+
Sbjct: 61 REKMETSPYRFKAKSGSFVQMKTRLYSFVNPWTKEMEYLVCSNSVI 106
>gi|405957204|gb|EKC23432.1| Aryl hydrocarbon receptor [Crassostrea gigas]
Length = 816
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ G+ E+ SGYD H DDL+ + H+ L++ G YR+ TK +W+WLQ+
Sbjct: 278 MFGFADRELATKSGYDLIHPDDLNYFSSAHQELIKTGSSGLIAYRWCTKDFRWLWLQSSC 337
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y NSKP+F++CTHR ++
Sbjct: 338 KVIYK--NSKPDFVICTHRQLT 357
>gi|148745435|gb|AAI42230.1| Endothelial PAS domain protein 1 [Bos taurus]
gi|296482559|tpg|DAA24674.1| TPA: endothelial PAS domain protein 1 [Bos taurus]
Length = 870
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LVGYHPQELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVP 121
+ Y+ N +P+ I+C + V+S + V D + P
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESP 362
>gi|124054321|gb|ABM89374.1| EPAS1 [Pongo pygmaeus]
Length = 259
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 107 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 166
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 167 TVIYNPRNLQPQCIMCVNYVLSEI 190
>gi|281350883|gb|EFB26467.1| hypothetical protein PANDA_015776 [Ailuropoda melanoleuca]
Length = 627
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 354 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 412
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W E+IV T+ VV NVL + P DS S +
Sbjct: 413 FITLRSRWFSFLNPWTKDVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 471
Query: 130 TGP 132
GP
Sbjct: 472 GGP 474
>gi|426226414|ref|XP_004007338.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Ovis aries]
Length = 853
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 247 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 306
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVP 121
+ Y+ N +P+ I+C + V+S + V D + P
Sbjct: 307 TVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESP 345
>gi|321117666|gb|ADW54528.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys molitrix]
Length = 719
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 227 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQA 286
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 287 TVIYNPKNSQPQCIVCVNYVLS 308
>gi|301781486|ref|XP_002926157.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Ailuropoda melanoleuca]
Length = 625
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++R++ + W E+IV T+ VV NVL + P DS S +
Sbjct: 412 FITLRSRWFSFLNPWTKDVEYIVSTNTVV-LANVLEGGDPTFPQLTASPHSMDSMLPSGE 470
Query: 130 TGP 132
GP
Sbjct: 471 GGP 473
>gi|321117670|gb|ADW54530.1| hypoxia-inducible factor-1alpha [Hypophthalmichthys nobilis]
Length = 719
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 227 LMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYRMMAKKGGFVWVETQA 286
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 287 TVIYNPKNSQPQCIVCVNYVLS 308
>gi|407316782|gb|AFU07573.1| hypoxia-inducible factor 3 alpha subunit [Gymnocypris namensis]
Length = 594
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V + L KG+ + +YRFL K ++W +T+
Sbjct: 255 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLQILFSKGQVCTSHYRFLAKNGGFMWTETQA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 315 TVLYNSKTSQPEAVVCLNFILSGV 338
>gi|321117674|gb|ADW54532.1| hypoxia-inducible factor-1alpha [Pseudorasbora parva]
Length = 719
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + K ++W++T+
Sbjct: 227 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFTKGQATTGQYRMMAKKGGFVWVETQA 286
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 287 TVIYNPKNSQPQCIVCVNYVLS 308
>gi|332227348|ref|XP_003262854.1| PREDICTED: endothelial PAS domain-containing protein 1 [Nomascus
leucogenys]
Length = 877
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 272 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVISGQYRMLAKHGGYVWLETQG 331
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 332 TVIYNPRNLQPQCIMCVNYVLSEI 355
>gi|291225565|ref|XP_002732753.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Saccoglossus kowalevskii]
Length = 742
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P E+LG S +DYYH DDL + + +++ KG+ S YRF K ++W+WL+T
Sbjct: 334 VLGYQPQELLGKSCFDYYHPDDLSHLKDSFQQVLKLKGQVLSVMYRFQAKNREWVWLRTS 393
Query: 86 FYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGD 134
+ + + + E+IVCT+ V + + N Q P+ E N G G+
Sbjct: 394 CFSFQNPYTDEVEYIVCTNTSVKNL----QQNQQQPELE--GNKEGGGE 436
>gi|410954769|ref|XP_003984034.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1 [Felis catus]
Length = 907
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 304 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 363
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 364 TVIYNPRNLQPQCIMCVNYVLSEI 387
>gi|344280870|ref|XP_003412205.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Loxodonta africana]
Length = 662
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 24 APPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQWIW 81
A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K +I
Sbjct: 416 ATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFIT 474
Query: 82 LQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL-----RRDNNQVP 121
L++R++ + W + E+IV T+ VV NVL +R + VP
Sbjct: 475 LRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGGPKRTHPTVP 518
>gi|407316786|gb|AFU07575.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
molitrix]
Length = 633
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V L KG+ + +YRFL K ++W +T+
Sbjct: 248 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQA 307
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 308 TVLYNSRTSQPEAVVCLNFILSGV 331
>gi|407316754|gb|AFU07559.1| hypoxia-inducible factor 1 alpha subunit [Protopterus annectens]
Length = 813
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 51/82 (62%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D++ H L KG+ T+ YR L K ++W++T+
Sbjct: 259 LMGYDPEDLLNHSVYEYYHALDSDNLTKTHHDLFTKGQVTTGQYRMLAKEGGYVWVETQA 318
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 319 TVIYNTKNSQPQCIVCVNYVLS 340
>gi|407316778|gb|AFU07571.1| hypoxia-inducible factor 3 alpha subunit [Hypophthalmichthys
nobilis]
Length = 646
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V L KG+ + +YRFL K ++W +T+
Sbjct: 255 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 315 TVLYNSRTSQPEAVVCLNFILSGV 338
>gi|2895756|gb|AAC12871.1| hypoxia-inducible factor 1 alpha related factor [Mus musculus]
Length = 874
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|40849967|gb|AAR95698.1| hypoxia-inducible factor-4alpha [Ctenopharyngodon idella]
Length = 643
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D V L KG+ + +YRFL K ++W +T+
Sbjct: 255 LVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRFLAKNGGFVWTETQA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 315 TVLYNSRTSQPEAVVCLNFILSGV 338
>gi|430024072|gb|AGA35555.1| hypoxia inducible factor alpha 1, partial [Etroplus suratensis]
Length = 595
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 133 MKFTYCDERITELLGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLA 192
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + +V S EQ+ D P
Sbjct: 193 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQ-----GEKVILSLEQTTDMKP 245
>gi|34785558|gb|AAH57870.1| Endothelial PAS domain protein 1 [Mus musculus]
gi|74153020|dbj|BAE34506.1| unnamed protein product [Mus musculus]
gi|148706668|gb|EDL38615.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 874
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|380039562|gb|AFD32325.1| hypoxia-inducible factor 1 alpha, partial [Huso huso]
Length = 134
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++LG S Y+YYH D D + H L KG+ + YR L K ++W++T+
Sbjct: 53 LMGYQPEDLLGRSVYEYYHALDSDHLTKTHHDLFAKGQAITGQYRMLAKKGGFVWVETQA 112
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 113 TVIYNTKNSQPQCIVCVNYVLS 134
>gi|440906166|gb|ELR56466.1| Endothelial PAS domain-containing protein 1 [Bos grunniens mutus]
Length = 873
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 267 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 326
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVP 121
+ Y+ N +P+ I+C + V+S + V D + P
Sbjct: 327 TVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTESP 365
>gi|73970126|ref|XP_531807.2| PREDICTED: endothelial PAS domain-containing protein 1 [Canis lupus
familiaris]
Length = 975
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 370 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 429
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 430 TVIYNPRNLQPQCIMCVNYVLSEI 453
>gi|195020286|ref|XP_001985163.1| GH16911 [Drosophila grimshawi]
gi|193898645|gb|EDV97511.1| GH16911 [Drosophila grimshawi]
Length = 409
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS YDY+H +D+ ++V CH+ +MQ E T+ YRF K +
Sbjct: 321 DQRATLVIGFLPQEILGTSFYDYFHKEDISALVECHKMVMQVPENITTQVYRFRCKDNGY 380
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W + +FI+ + V
Sbjct: 381 IQLQSEWRAFKNPWTNDIDFIIAKNSV 407
>gi|1805270|gb|AAB41496.1| endothelial PAS domain protein 1 [Mus musculus]
Length = 875
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 265 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 324
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 325 TVIYNPRNLQPQCIMCVNYVLSEI 348
>gi|178057356|ref|NP_034267.3| endothelial PAS domain-containing protein 1 [Mus musculus]
gi|3914285|sp|P97481.2|EPAS1_MOUSE RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=HIF-1-alpha-like factor;
Short=HLF; Short=mHLF; AltName: Full=HIF-related factor;
Short=HRF; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
Length = 874
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|301753236|ref|XP_002912483.1| PREDICTED: endothelial PAS domain-containing protein 1-like
[Ailuropoda melanoleuca]
Length = 1022
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 418 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 477
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 478 TVIYNPRNLQPQCIMCVNYVLSEI 501
>gi|390136659|pdb|4F3L|B Chain B, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 387
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 294 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 352
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVL 113
+I L++R++ + W + E+IV T+ VV NVL
Sbjct: 353 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVL 386
>gi|126697516|gb|ABO26715.1| hypoxia-inducible factor 1 alpha [Esox lucius]
Length = 763
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 256 MKFTYCDERITELMGYNPEDLLNRSVYEYYHALDSDHLTKTHHNLFTKGQVSTGQYRMLA 315
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++WL+T+ + Y+ NS+P+ +VC + V+S + + ++ S EQ D P
Sbjct: 316 KRGGFVWLETQATVIYNNKNSQPQCVVCVNYVLSGI-----EEEKLVLSLEQIEDMRP 368
>gi|338714031|ref|XP_001498492.3| PREDICTED: endothelial PAS domain-containing protein 1 [Equus
caballus]
Length = 877
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 270 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 329
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 330 TVIYNPRNLQPQCIMCVNYVLSEI 353
>gi|407316792|gb|AFU07578.1| hypoxia-inducible factor 3 alpha subunit, partial [Lepisosteus
platostomus]
Length = 483
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y+Y+H D D + L+ KG+ T+ +YRFL K ++W +T+
Sbjct: 138 LVGYKPEDLIGRSAYEYHHALDSDHLTKSLHTLLSKGQVTTSHYRFLAKNGGFVWAETQA 197
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 198 TVIYNGKTSQPEGVVCLNFILSGV 221
>gi|2117020|dbj|BAA20130.1| mHLF [Mus musculus]
Length = 874
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|27807411|ref|NP_777150.1| endothelial PAS domain-containing protein 1 [Bos taurus]
gi|5019614|dbj|BAA78676.1| endothelial PAS domain protein 1/hypoxia-inducible factor-2 alpha
[Bos taurus]
Length = 870
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|156717516|ref|NP_001096298.1| uncharacterized protein LOC100124875 [Xenopus (Silurana)
tropicalis]
gi|134023843|gb|AAI35612.1| LOC100124875 protein [Xenopus (Silurana) tropicalis]
Length = 594
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
V KP F M+ +Y D A I+GYLP E+LGTS Y+Y+H+DD + H+A+
Sbjct: 323 VKVKPTEFVTRYTMDGKFVYVDQRATAILGYLPQELLGTSCYEYFHIDDYGHLTDRHKAV 382
Query: 60 MQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E T+C Y+F K +I LQ++++ + W E+IV + VV
Sbjct: 383 LQSSEKVETNC-YKFRVKDGSFITLQSQWFGFINPWTKDLEYIVSVNTVV 431
>gi|407316758|gb|AFU07561.1| hypoxia-inducible factor 1 alpha subunit [Schizothorax prenanti]
Length = 770
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 260 LMGYEPDDLLKRSVYEYYHALDSDHLNKTHHNLFAKGQATTGQYRMLAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV---NVLRRDNNQV--PDSEEQSN 128
+ Y+ NS+P+ +VC + V+S + +V+ V P +EE+ N
Sbjct: 320 TVIYNPKNSQPQCVVCVNYVLSGIVEGDVVLSLQQTVTEPKAEEKEN 366
>gi|328776724|ref|XP_001121441.2| PREDICTED: cycle [Apis mellifera]
Length = 925
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A ++G+LP E+LGTS Y+YYH DD+ + H+A +Q E T+ YRF TKG +
Sbjct: 639 DQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQASESVTTQIYRFRTKGASF 698
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDT 130
+ LQ+ + + W E+++ + V S D+ + S +S D+
Sbjct: 699 VKLQSEWKSFRNPWTKDIEYLIAKNSVTS------NDSRSITSSGNRSEDS 743
>gi|344291845|ref|XP_003417640.1| PREDICTED: endothelial PAS domain-containing protein 1 [Loxodonta
africana]
Length = 891
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 286 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 345
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ N +P+ I C + V+S
Sbjct: 346 TVIYNPRNLQPQCITCVNYVLS 367
>gi|6644408|gb|AAF21052.1|AF212989_1 hypoxia-inducible factor 2 alpha [Coturnix coturnix]
Length = 870
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ + YR L K ++WL+T+
Sbjct: 263 LIGYHPEELLGRSVYEFYHALDSENMTKSHQNLCTKGQVVTGQYRMLAKHGGYVWLETQG 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 323 TVIYNTRNLQPQCIICVNYVLSEI 346
>gi|402894183|ref|XP_003910250.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Papio anubis]
Length = 668
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 396 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 454
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VV NVL + P
Sbjct: 455 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFP 496
>gi|328718768|ref|XP_001951675.2| PREDICTED: hypothetical protein LOC100167974 [Acyrthosiphon pisum]
Length = 928
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 53/96 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M I D V +GY P ++G S +DYYH D +SV + L +KG+ + YRFL+
Sbjct: 272 MKYIIADDVITNYVGYEPDSLVGKSVFDYYHAQDCNSVEKSFKILFEKGQVETNKYRFLS 331
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
KG ++W+ T+ I KPE I+C + V+S V
Sbjct: 332 KGGGYVWIITQATILNDHKGLKPESIMCINYVISGV 367
>gi|281352631|gb|EFB28215.1| hypothetical protein PANDA_000205 [Ailuropoda melanoleuca]
Length = 860
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 256 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 315
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 316 TVIYNPRNLQPQCIMCVNYVLSEI 339
>gi|444730401|gb|ELW70787.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Tupaia chinensis]
Length = 571
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 298 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 356
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
+I L++R++ + W + E+IV T+ VV NVL + P
Sbjct: 357 FITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFP 398
>gi|12831205|ref|NP_075578.1| endothelial PAS domain-containing protein 1 [Rattus norvegicus]
gi|32469610|sp|Q9JHS1.1|EPAS1_RAT RecName: Full=Endothelial PAS domain-containing protein 1;
Short=EPAS-1; AltName: Full=Hypoxia-inducible factor
2-alpha; Short=HIF-2-alpha; Short=HIF2-alpha
gi|8953577|emb|CAB96612.1| hypoxia inducible factor 2 alpha [Rattus norvegicus]
Length = 874
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVVYNPRNLQPQCIMCVNYVLSEI 347
>gi|431912714|gb|ELK14732.1| Endothelial PAS domain-containing protein 1 [Pteropus alecto]
Length = 884
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 278 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 337
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 338 TVIYNPRNLQPQCIMCVNYVLSEI 361
>gi|395829787|ref|XP_003788024.1| PREDICTED: endothelial PAS domain-containing protein 1 [Otolemur
garnettii]
Length = 912
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D + + H+ L KG+ S YR L K ++WL+T+
Sbjct: 312 LIGYHPEELLGRSAYEFYHALDSEHMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 371
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ ++C + V+S +
Sbjct: 372 TVIYNPRNLQPQCVMCVNYVLSEI 395
>gi|327278955|ref|XP_003224224.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Anolis carolinensis]
Length = 625
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 353 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQSREKINTNC-YKFKVKDGS 411
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++ ++ + W + E+IV T+ VVS +VL + P DS Q+ +
Sbjct: 412 FITLRSCWFSFMNPWTKEVEYIVSTNTVVS-AHVLDGGDATFPQLAASPHSMDSVLQAGE 470
Query: 130 TGPGDS 135
GP S
Sbjct: 471 GGPKRS 476
>gi|327278953|ref|XP_003224223.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Anolis carolinensis]
Length = 633
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 361 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQSREKINTNC-YKFKVKDGS 419
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSND 129
+I L++ ++ + W + E+IV T+ VVS +VL + P DS Q+ +
Sbjct: 420 FITLRSCWFSFMNPWTKEVEYIVSTNTVVS-AHVLDGGDATFPQLAASPHSMDSVLQAGE 478
Query: 130 TGPGDS 135
GP S
Sbjct: 479 GGPKRS 484
>gi|87204421|gb|ABD32158.1| hypoxia-inducible factor 1 alpha [Micropogonias undulatus]
Length = 752
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ + YR L
Sbjct: 250 MKFTYCDERITELMGYDPDDLLNRSVYEYYHAQDSDHLTKTHHNLFAKGQVCTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ S EQ+ D P
Sbjct: 310 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQ-----EEKLILSLEQTEDVKP 362
>gi|307186380|gb|EFN72014.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Camponotus floridanus]
Length = 890
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 4 FKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
+P+ F M+ D A P++G+LP E+LGTS Y+YYH DD+ + H+A +Q
Sbjct: 593 LRPIQFVSRHAMDGKFLFVDQRATPVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQ 652
Query: 62 KGEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
E T+ YRF +K ++ LQ+ + + W E+++ + + + + L NN
Sbjct: 653 TPERITTQIYRFRSKDANFVRLQSEWKSFRNPWTKDIEYLIAKNSAI-FCDAL-SGNNGS 710
Query: 121 PDSEEQSN 128
DS Q N
Sbjct: 711 EDSSVQDN 718
>gi|159162817|pdb|1P97|A Chain A, Nmr Structure Of The C-Terminal Pas Domain Of Hif2a
Length = 114
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L
Sbjct: 16 MKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLA 75
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++WL+T+ + Y+ N +P+ I+C + V+S +
Sbjct: 76 KHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEI 111
>gi|221046761|pdb|3F1N|A Chain A, Crystal Structure Of A High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains, With Internally
Bound Ethylene Glycol.
gi|221046763|pdb|3F1O|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains, With An
Internally- Bound Artificial Ligand
gi|221046765|pdb|3F1P|A Chain A, Crystal Structure Of A High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains
gi|283806888|pdb|3H7W|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains With The
Artificial Ligand Ths017
gi|283806891|pdb|3H82|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-Terminal Pas Domains With The
Artificial Ligand Ths020
gi|453056112|pdb|4GHI|A Chain A, Crystal Structure Of The High Affinity Heterodimer Of Hif2
Alpha And Arnt C-terminal Pas Domains In Complex With A
Benzoxadiazole Antagonist
Length = 117
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L
Sbjct: 19 MKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLA 78
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++WL+T+ + Y+ N +P+ I+C + V+S +
Sbjct: 79 KHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEI 114
>gi|73762523|gb|AAZ83700.1| aryl hydrocarbon receptor [Dreissena polymorpha]
Length = 846
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY ++ SGYD H DDL+ H L++ G YR+LTK QW+WLQ+
Sbjct: 289 MFGYGDRDLAMLSGYDLIHPDDLNYFAAAHGELIKTGSAGLIAYRWLTKDYQWLWLQSSC 348
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y NSKP+F++ THR ++
Sbjct: 349 KVIYK--NSKPDFVIATHRQLT 368
>gi|67968892|dbj|BAE00803.1| unnamed protein product [Macaca fascicularis]
Length = 375
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+ Y+F K +
Sbjct: 103 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 162
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
I L++R++ + W + E+IV T+ VV NVL + P
Sbjct: 163 ITLRSRWFSFMNPWTKEVEYIVSTNTVV-LANVLEGGDPTFP 203
>gi|432904408|ref|XP_004077316.1| PREDICTED: LOW QUALITY PROTEIN: endothelial PAS domain-containing
protein 1-like [Oryzias latipes]
Length = 862
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 32 PFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYH 91
P + G S YD+YH D DSV H L KG+ S YR L K ++W++T+ + Y+
Sbjct: 270 PQSIXGRSVYDFYHALDSDSVTKSHHNLCSKGQAVSGQYRMLAKKGGYVWVETQGTVIYN 329
Query: 92 QWNSKPEFIVCTHRVVS 108
NS+P+ IVC + V+S
Sbjct: 330 SRNSQPQCIVCINYVLS 346
>gi|403269576|ref|XP_003926799.1| PREDICTED: endothelial PAS domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 867
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P ++LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LIGYHPEDLLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 324 TVIYNPRNLQPQCIMCVNYVLSEI 347
>gi|225904228|gb|ACO35259.1| hypoxia-inducible factor-1-alpha [Pseudorasbora parva]
Length = 774
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ YR + + ++W++T+
Sbjct: 260 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFTKGQATTGQYRMMAEKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|47563646|dbj|BAD20455.1| clock type A [Hyla japonica]
Length = 332
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE 57
D APPIIGYLPFEVLGTSGYDYYHVDDL+++ C E
Sbjct: 281 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCPE 317
>gi|351715378|gb|EHB18297.1| Endothelial PAS domain-containing protein 1, partial
[Heterocephalus glaber]
Length = 862
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P ++LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 256 LIGYHPEDLLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 315
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ N +P+ I+C + V+S +
Sbjct: 316 TVIYNPRNLQPQCIMCVNYVLSEI 339
>gi|338191512|gb|AEI84585.1| HIF-alpha [Cynoglossus semilaevis]
Length = 735
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H +L KG+ ++ YR L
Sbjct: 249 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLNKTHHSLFAKGQVSTGQYRMLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ S EQ+ D P
Sbjct: 309 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQ-----EEKLILSLEQTEDVKP 361
>gi|328780897|ref|XP_394737.4| PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC411264
[Apis mellifera]
Length = 1099
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YRF K W WLQT
Sbjct: 529 LLGYSDAELANLGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQKKDGGWQWLQTSS 588
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 589 RLVYK--NSKPDFVISTHR 605
>gi|307168322|gb|EFN61528.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Camponotus floridanus]
Length = 612
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 299 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 358
Query: 86 FYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSE 124
+ + +N E+IVCT+ S+ N Q +SE
Sbjct: 359 AFAFLNPFNEDVEYIVCTN---SHAKSFHPSNEQTAESE 394
>gi|56785779|gb|AAW29027.1| hypoxia-inducible factor 1 alpha, partial [Epinephelus coioides]
Length = 699
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 218 MKFTYCDERITELMGYDPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLA 277
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ S EQ+ D P
Sbjct: 278 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQ-----EEKMIFSLEQTEDVKP 330
>gi|290760626|gb|ADD59898.1| hypoxia-inducible factor 3 alpha [Mustelus canis]
Length = 468
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S YD++H D D + L+ KG+ + YRFL K ++W +T+
Sbjct: 256 LVGYHPNDLIGRSAYDFFHALDFDHLTRSLHVLLSKGQVCTSRYRFLAKNGGFVWTETQA 315
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 316 TVLYNSKTSQPEAVVCLNFILSAV 339
>gi|126697518|gb|ABO26716.1| hypoxia-inducible factor 1 alpha [Gymnocephalus cernuus]
Length = 748
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ Q+ S EQ D P
Sbjct: 310 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGI----QEEKQIL-SLEQIEDVKP 362
>gi|114793377|pdb|2A24|A Chain A, Haddock Structure Of Hif-2aARNT PAS-B Heterodimer
Length = 107
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L
Sbjct: 11 MKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLA 70
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++WL+T+ + Y+ N +P+ I+C + V+S +
Sbjct: 71 KHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEI 106
>gi|125654604|gb|AAZ95453.2| hypoxia-inducible factor [Dicentrarchus labrax]
Length = 754
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H+ L KG+ + YR L
Sbjct: 251 MKFTYCDERITELMGYDPEDLLNRSVYEYYHAQDSDHLTKTHQNLFAKGQVCTGQYRMLA 310
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 311 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLS 344
>gi|126697522|gb|ABO26718.1| hypoxia-inducible factor 1 alpha [Sander lucioperca]
Length = 749
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ Q+ S EQ D P
Sbjct: 310 KKGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGI----QEEKQIL-SLEQIEDVRP 362
>gi|126697520|gb|ABO26717.1| hypoxia-inducible factor 1 alpha [Perca fluviatilis]
Length = 749
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ Q+ S EQ D P
Sbjct: 310 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGI----QEEKQIL-SLEQIEDVKP 362
>gi|443697321|gb|ELT97837.1| hypothetical protein CAPTEDRAFT_180266 [Capitella teleta]
Length = 363
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D P++GY P E+LG S Y++YH +D + E +++ KG+ S YRF K
Sbjct: 272 TFIDQRVTPVLGYQPQELLGKSAYEFYHHEDQQHMKETFEQVLKLKGQVMSVMYRFRAKN 331
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
++W+WL+T + + + E++VCT+ +
Sbjct: 332 REWVWLRTSSFSFQNPYTDDVEYVVCTNSLA 362
>gi|328724874|ref|XP_001946523.2| PREDICTED: hypothetical protein LOC100167590 [Acyrthosiphon pisum]
Length = 978
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H DDL V + H+ L++ G YR TK W WLQT
Sbjct: 308 LLGYCDSELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRVQTKPGTWQWLQTSS 367
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 368 RLVYK--NSKPDFVIGTHR 384
>gi|45602851|gb|AAR95697.2| hypoxia-inducible factor-1alpha [Ctenopharyngodon idella]
Length = 774
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ T+ Y + K ++W++T+
Sbjct: 260 LMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATTGQYHMMAKKGGFVWVETQA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ IVC + V+S
Sbjct: 320 TVIYNPKNSQPQCIVCVNYVLS 341
>gi|119588913|gb|EAW68507.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_e
[Homo sapiens]
Length = 483
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQ 78
D A I+ YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K
Sbjct: 311 DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGS 369
Query: 79 WIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+I L++R++ + W + E+IV T+ VV
Sbjct: 370 FITLRSRWFSFMNPWTKEVEYIVSTNTVV 398
>gi|185134444|ref|NP_001117760.1| hypoxia-inducible factor 1-alpha [Oncorhynchus mykiss]
gi|32469773|sp|Q98SW2.1|HIF1A_ONCMY RecName: Full=Hypoxia-inducible factor 1-alpha; Short=HIF-1-alpha;
Short=HIF1-alpha
gi|13561506|gb|AAK30364.1|AF304864_1 hypoxia-inducible factor 1 alpha [Oncorhynchus mykiss]
Length = 766
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D ++ H L KG+ ++ YR L
Sbjct: 252 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLMKTHHNLFAKGQVSTGQYRMLA 311
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 312 KRGGFVWVETQATVIYNNKNSQPQCVVCVNYVLS 345
>gi|345494448|ref|XP_001601655.2| PREDICTED: hypothetical protein LOC100117407 [Nasonia vitripennis]
Length = 815
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D P + GY E++ + Y Y HV D + H+ L+ KG+ T+ YYRFLT+ W+
Sbjct: 406 DANVPQLTGYESQELVDKTLYHYVHVSDAVHLQQAHQILLCKGQVTTRYYRFLTRTGGWV 465
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTIKM 140
W+Q+ I ++ +S+P IV + V+S + + V S+++++ PG+ + M
Sbjct: 466 WMQSYATIVHNSRSSRPHCIVSVNYVLSQI----EGKDLVLSSDQKASAACPGNPPSTPM 521
>gi|223648404|gb|ACN10960.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 752
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YY+ D D ++ H L KG+ ++ YR L
Sbjct: 252 MKFTYCDERITELMGYDPEDLLNRSVYEYYYAMDSDHLMKTHHNLFAKGQVSTGQYRMLA 311
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + + ++ S EQ+ D P
Sbjct: 312 KRGGFVWVETQATVIYNNKNSQPQCVVCVNYVLSDI-----EEEKMMLSLEQTEDMRP 364
>gi|325513897|gb|ADZ23997.1| hypoxia-inducible factor 1a [Myxocyprinus asiaticus]
Length = 780
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++G+ P ++L S Y+YYH D D + H L KG+ T+ YR L K ++W++T+
Sbjct: 261 LMGHEPDDLLNKSVYEYYHALDSDHLTKTHHDLFAKGQATTGQYRMLAKKGGYVWVETQA 320
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ Y+ NS+P+ IVC + V+
Sbjct: 321 TVIYNPKNSQPQCIVCVNYVL 341
>gi|227908937|gb|ACL80140.3| aryl hydrocarbon receptor [Azumapecten farreri]
Length = 821
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 34 EVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQW 93
E+ SGYD H DDL H+ L++ G YR+LTK +W+WLQ+ +
Sbjct: 293 ELATKSGYDLIHPDDLSYFAAAHQELIKTGSSGLIAYRWLTKDFRWLWLQSSCKVIXK-- 350
Query: 94 NSKPEFIVCTHRVVS 108
NSKP+FI+CTHR ++
Sbjct: 351 NSKPDFIICTHRQLT 365
>gi|71911739|gb|AAZ52832.1| hypoxia inducible factor 1 alpha [Zoarces viviparus]
Length = 747
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 248 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFTKGQVSTGQYRMLA 307
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 308 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLS 341
>gi|407316784|gb|AFU07574.1| hypoxia-inducible factor 3 alpha subunit [Polyodon spathula]
Length = 532
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y+YYH D D V + L+ KG+ + +YRFL K ++W +T+
Sbjct: 249 LLGYSPEDLIGHSAYEYYHALDTDHVTKSLQILLSKGQVCTGHYRFLVKHGGFVWAETQA 308
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y ++ PE +VC + ++S V
Sbjct: 309 TVLYSSKSTLPEAVVCINFILSGV 332
>gi|149050487|gb|EDM02660.1| endothelial PAS domain protein 1 [Rattus norvegicus]
Length = 873
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 264 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 323
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQS 127
+ Y+ N +P+ I+C V+Y VL + N V S +Q+
Sbjct: 324 TVVYNPRNLQPQCIMC----VNY--VLEIEKNDVVFSMDQT 358
>gi|357613177|gb|EHJ68357.1| hypothetical protein KGM_16693 [Danaus plexippus]
Length = 513
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+ GYD H +DL V + H+ L++ G YRF TK W WLQT
Sbjct: 195 LLGYTDGELSNMGGYDLVHYEDLAYVASAHQELLKTGASGMIAYRFQTKDGLWQWLQTSS 254
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+F++ THR
Sbjct: 255 RLVYK--NSKPDFVISTHR 271
>gi|431908415|gb|ELK12012.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2,
partial [Pteropus alecto]
Length = 591
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 1 MVGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEA 58
M+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A
Sbjct: 318 MIKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKA 377
Query: 59 LMQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV------SYVN 111
++Q E + Y+F K ++ L+++++ + W + E+IV + +V V+
Sbjct: 378 VLQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSINTLVLGHSENGEVS 437
Query: 112 VLRRDNNQVPDSEEQSNDTGPGDS 135
+L + + +S QS + PG S
Sbjct: 438 LLPCSSQSLEESSRQSCISVPGMS 461
>gi|357628246|gb|EHJ77636.1| putative arylhydrocarbon receptor nuclear translocator-like protein
b [Danaus plexippus]
Length = 641
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D A ++GY P ++LG YD+YH +D + + +++ KG+ S YRF TK
Sbjct: 333 TFADQRAAQVLGYAPADLLGKLCYDFYHPEDQQHMRDNFDQVLKLKGQIISLMYRFRTKN 392
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
++WIWL+T + + +N E+IVCT+ + +
Sbjct: 393 REWIWLRTSAFAFLNPYNDDVEYIVCTNTLAN 424
>gi|391327945|ref|XP_003738455.1| PREDICTED: aryl hydrocarbon receptor-like [Metaseiulus
occidentalis]
Length = 685
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++ Y ++ GYD H DDL+ V + H+ L++ G YR K W WLQT
Sbjct: 313 LLNYTDQDIANFGGYDLVHHDDLEYVASAHQELLKTGASGLIAYRLSAKDGSWQWLQTST 372
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+CTHR
Sbjct: 373 RLVYK--NSKPDFILCTHR 389
>gi|296240119|gb|ADH01741.1| hypoxia-inducible factor 1 alpha [Callionymus valenciennei]
Length = 703
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P E+L S Y+YYH D + + H L KG+ + YR L
Sbjct: 241 MKFTYCDERITELMGYDPDELLNRSVYEYYHALDSNHLTKTHHNLFAKGQVITGQYRMLA 300
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSND 129
K ++W++T+ + Y+ NS+P+ +VC + V+S V Q S EQ+ D
Sbjct: 301 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGVQ-----EEQTILSLEQTQD 350
>gi|432889669|ref|XP_004075303.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oryzias latipes]
Length = 650
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y++YH D D + L+ KG+ ++ +YRFL ++W +T+
Sbjct: 262 LVGYKPEDLVGRSAYEFYHALDSDHMKKSLHTLLSKGQVSTSHYRFLANNGGFVWAETQA 321
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y S+PE IVC + ++S V
Sbjct: 322 TVLYSSKTSQPEAIVCLNFILSSV 345
>gi|71911731|gb|AAZ52828.1| hypoxia inducible factor 1 alpha [Pachycara brachycephalum]
Length = 747
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 248 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFTKGQVSTGQYRMLA 307
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 308 KRGGFVWVETQATVIYNNKNSQPQCVVCLNFVLS 341
>gi|158299100|ref|XP_319213.4| AGAP010058-PA [Anopheles gambiae str. PEST]
gi|157014206|gb|EAA14581.4| AGAP010058-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D + GY P +++ + Y Y H D+ V H+ L+QKG+ T+ YYRFLTK W
Sbjct: 309 DAKVSQLTGYEPQDLIENTLYQYIHALDVVQVRQTHQTLLQKGQATTMYYRFLTKAGGWR 368
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVV 107
W+Q+ I ++ +S+P IV + V+
Sbjct: 369 WVQSHATIVHNTRSSRPHCIVSVNYVL 395
>gi|395529671|ref|XP_003766932.1| PREDICTED: hypoxia-inducible factor 3-alpha [Sarcophilus harrisii]
Length = 1015
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 574 MKFTYCDERISEVAGYCPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 633
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVPDSE------ 124
+ ++W QT+ + +PE +VC H V+S V VL + + P
Sbjct: 634 RNGGYLWTQTQATVISGGRGPQPESVVCVHFVLSRVEETGVVLSLEQTEQPTRRPPRPAE 693
Query: 125 ----EQSNDTGPGD 134
+ + GPGD
Sbjct: 694 RGPPSEKSPQGPGD 707
>gi|3769480|gb|AAC64519.1| single-minded protein [Drosophila melanogaster]
Length = 643
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 234 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 293
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 294 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 327
>gi|28571685|ref|NP_524340.2| single-minded, isoform A [Drosophila melanogaster]
gi|21744281|gb|AAM76199.1| RE54280p [Drosophila melanogaster]
gi|28381286|gb|AAF54902.3| single-minded, isoform A [Drosophila melanogaster]
Length = 688
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|31077159|sp|P05709.3|SIM_DROME RecName: Full=Protein single-minded
Length = 697
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|195500692|ref|XP_002097482.1| GE26246 [Drosophila yakuba]
gi|194183583|gb|EDW97194.1| GE26246 [Drosophila yakuba]
Length = 699
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|156373864|ref|XP_001629530.1| predicted protein [Nematostella vectensis]
gi|156216532|gb|EDO37467.1| predicted protein [Nematostella vectensis]
Length = 372
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D ++GY P ++LG YD++H DDL+ ++ ++ +M+ KG+ S YRF +K
Sbjct: 280 TFVDQRVTEVLGYQPRDMLGQLCYDFFHPDDLEHMMESYDQVMKLKGQTLSVRYRFRSKT 339
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
W+WL+T + + + + E+IVC + +V+
Sbjct: 340 GDWVWLRTSCFSFQNPYTDEAEYIVCNNNLVN 371
>gi|442618830|ref|NP_001262527.1| single-minded, isoform C [Drosophila melanogaster]
gi|440217377|gb|AGB95909.1| single-minded, isoform C [Drosophila melanogaster]
Length = 675
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 275 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 334
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 335 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 372
>gi|220942606|gb|ACL83846.1| sim-PA [synthetic construct]
Length = 689
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|195037447|ref|XP_001990172.1| GH18379 [Drosophila grimshawi]
gi|193894368|gb|EDV93234.1| GH18379 [Drosophila grimshawi]
Length = 774
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ + H+ L+ KG+ TS YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMPMRCSHQILLYKGQVTSKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|442618832|ref|NP_001262528.1| single-minded, isoform D [Drosophila melanogaster]
gi|440217378|gb|AGB95910.1| single-minded, isoform D [Drosophila melanogaster]
Length = 672
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 272 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 331
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 332 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 365
>gi|45551885|ref|NP_731771.3| single-minded, isoform B [Drosophila melanogaster]
gi|45446472|gb|AAN14343.3| single-minded, isoform B [Drosophila melanogaster]
Length = 664
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 264 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 323
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 324 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 357
>gi|47230124|emb|CAG10538.1| unnamed protein product [Tetraodon nigroviridis]
Length = 854
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ + YR L K ++WL+T+
Sbjct: 744 LMGYDPEDLLNRSVYEYYHAQDSDHLTKTHHNLFAKGQVCTGQYRMLAKRGGFVWLETQA 803
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ Y+ NS+P+ +VC + V+
Sbjct: 804 TVIYNTKNSQPQCVVCVNFVL 824
>gi|288887162|gb|ADC55889.1| hypoxia inducible factor-1alpha [Gobionotothen gibberifrons]
Length = 519
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P +L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 219 MKFTYCDERITELMGYDPDNLLNRSVYEYYHAMDSDHLTKTHHDLFAKGQVSTGQYRMLA 278
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGP 132
K ++W++T+ + Y+ NS+P+ +VC + V+S + ++ S EQ D P
Sbjct: 279 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQ-----EEKLVLSLEQMEDVKP 331
>gi|194901552|ref|XP_001980316.1| GG19445 [Drosophila erecta]
gi|190652019|gb|EDV49274.1| GG19445 [Drosophila erecta]
Length = 698
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|347964476|ref|XP_311311.5| AGAP000773-PA [Anopheles gambiae str. PEST]
gi|333467549|gb|EAA06894.5| AGAP000773-PA [Anopheles gambiae str. PEST]
Length = 1045
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H+ LM KG+ T+ YYRFLTKG W W+Q+
Sbjct: 295 LTGYEPQDLIEKTLYQYVHAADILHMRYSHQVLMYKGQVTTKYYRFLTKGGGWAWVQSYA 354
Query: 87 YITYHQWNSKPEFIVCTHRVVS-------YVNVLRRDNNQVPDSEEQSNDTGP 132
+ ++ +S+P IV + V+S +N +++ + P + S P
Sbjct: 355 TVVHNTRSSRPHCIVSVNYVLSDQEAQDLLLNEVQQPQHSAPTQHQPSPSVKP 407
>gi|195145848|ref|XP_002013902.1| GL24392 [Drosophila persimilis]
gi|194102845|gb|EDW24888.1| GL24392 [Drosophila persimilis]
Length = 764
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|195108655|ref|XP_001998908.1| GI23369 [Drosophila mojavensis]
gi|193915502|gb|EDW14369.1| GI23369 [Drosophila mojavensis]
Length = 779
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|194741162|ref|XP_001953058.1| GF17581 [Drosophila ananassae]
gi|190626117|gb|EDV41641.1| GF17581 [Drosophila ananassae]
Length = 746
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|195571241|ref|XP_002103612.1| GD18883 [Drosophila simulans]
gi|194199539|gb|EDX13115.1| GD18883 [Drosophila simulans]
Length = 697
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNV 112
KG W+W+Q+ + ++ +S+ FIV + V+S V
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREV 385
>gi|198451724|ref|XP_002137347.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
gi|198131616|gb|EDY67905.1| GA26599 [Drosophila pseudoobscura pseudoobscura]
Length = 767
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|195329352|ref|XP_002031375.1| GM24085 [Drosophila sechellia]
gi|194120318|gb|EDW42361.1| GM24085 [Drosophila sechellia]
Length = 632
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 223 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 282
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 283 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 316
>gi|348537940|ref|XP_003456450.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 677
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G SG+++ H D D + L+ KG+ ++ YRFL ++W +T+
Sbjct: 267 LVGYKPDDLIGRSGFEFLHALDSDHINKSLHTLLSKGQVSTSQYRFLANNGGYVWAETQA 326
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV-------NVLRRDNNQVPDSEEQSNDTGPGD 134
+ Y+ S+P+ IVC + ++S V ++ + ++VP E D+G D
Sbjct: 327 TVLYNSKTSQPDAIVCLNFILSSVEQPDVIFSMEQTRCSRVPKIEPADEDSGTAD 381
>gi|195449946|ref|XP_002072296.1| GK22407 [Drosophila willistoni]
gi|194168381|gb|EDW83282.1| GK22407 [Drosophila willistoni]
Length = 743
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|158465|gb|AAA28900.1| sim nuclear protein, partial [Drosophila melanogaster]
Length = 655
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 246 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 305
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 306 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 339
>gi|307194991|gb|EFN77076.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Harpegnathos saltator]
Length = 625
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 308 ILGYTPSELLGHPCYDFFHPEDLAHMRESFEQVLKLKGQVVSAMYRFRAKNRDWVWLRTS 367
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 368 AFAFLNPFNEDIEYIVCTN 386
>gi|195395110|ref|XP_002056179.1| single-minded [Drosophila virilis]
gi|194142888|gb|EDW59291.1| single-minded [Drosophila virilis]
Length = 761
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M +D + GY P +++ + Y Y H D+ ++ H+ L+ KG+ T+ YYRFLT
Sbjct: 288 MKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLT 347
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
KG W+W+Q+ + ++ +S+ FIV + V+S
Sbjct: 348 KGGGWVWVQSYATLVHNSRSSREVFIVSVNYVLS 381
>gi|380014080|ref|XP_003691071.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Apis florea]
Length = 830
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A ++G+LP E+LGTS Y+YYH DD+ + H+A +Q E T+ YRF TKG +
Sbjct: 544 DQRATLVLGFLPQELLGTSMYEYYHHDDIPHLAESHKAALQASESVTTQIYRFRTKGASF 603
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV-SYVNVLRRDNNQVPDSEEQSN 128
+ LQ+ + + W E+++ + V S + N+ DS Q N
Sbjct: 604 VKLQSEWKSFRNPWTKDIEYLIAKNSVTSSDSRSITSSGNRSEDSSVQGN 653
>gi|390353292|ref|XP_780848.3| PREDICTED: uncharacterized protein LOC575350 [Strongylocentrotus
purpuratus]
Length = 1397
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E GY Y H +D+ H +L++KGE Y+R ++K +W+W+Q +
Sbjct: 328 VLGYTDMEFKSLPGYQYVHYEDIIYCSEMHSSLIRKGETGFIYFRLMSKVMKWVWVQAKG 387
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y N KP+++V THR +S
Sbjct: 388 RVMYK--NGKPDYLVSTHRPMS 407
>gi|83778886|gb|ABC47310.1| hypoxia-inducible factor 1 alpha [Oryzias melastigma]
Length = 748
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ + YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSIYEYYHALDSDHLTKTHHNLFAKGQVCTGRYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 310 KSGGFVWVETQATVIYNNKNSQPQCVVCVNFVLS 343
>gi|407316790|gb|AFU07577.1| hypoxia-inducible factor 2 alpha subunit, partial [Protopterus
annectens]
Length = 727
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY E+LG S Y++YH D +++ H+ L KG+ S YR L K ++W++T
Sbjct: 258 LMGYHSEELLGRSVYEFYHALDSENMTKTHQNLCTKGQVISGQYRMLAKHGGYVWIETHG 317
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
+ Y+ NS+P+ I+C + V+S + +NN V
Sbjct: 318 TVIYNSRNSQPQCIICINYVLSTI----EENNTV 347
>gi|390350866|ref|XP_783102.3| PREDICTED: endothelial PAS domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 933
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 54/96 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY+P E++G S Y YYH D + ++ L KG+ ++ YRFL
Sbjct: 258 MKFTYCDERIEQLMGYIPNELVGQSFYVYYHALDGQLIDKSYKDLYAKGQTSTGRYRFLA 317
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
K ++WL+T+ I Y+ +KP+ IVC + +S V
Sbjct: 318 KNGGYMWLETQATIIYNNKTNKPQCIVCVNYAISGV 353
>gi|321477475|gb|EFX88434.1| hypothetical protein DAPPUDRAFT_42139 [Daphnia pulex]
Length = 426
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++G+ E+ GYD H DDL V + H+ L++ G YR TK Q+ WLQT
Sbjct: 272 LLGHSDAELSSLGGYDLVHFDDLAYVASAHQELLKTGASGLIAYRLQTKDGQFQWLQTSS 331
Query: 87 YITYHQWNSKPEFIVCTHR 105
+ Y NSKP+FI+ THR
Sbjct: 332 RLVYK--NSKPDFIISTHR 348
>gi|47219792|emb|CAG03419.1| unnamed protein product [Tetraodon nigroviridis]
Length = 376
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 2 VGFKPVTFCMSDLMNSTIYDLV---APPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEA 58
V KP F M I L+ A I+GYLP E+LGTS Y+Y+H DDL + H
Sbjct: 267 VQVKPTEFITRYAMEWQISLLLIKGATTILGYLPQELLGTSCYEYFHQDDLPQLADRHRK 326
Query: 59 LMQKGEG--TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+++ E T+C Y+F TK ++ LQ++++ + W + E+IV T+ V+
Sbjct: 327 VLRSKEKVETNC-YKFKTKHGSFVTLQSQWFSFINPWTKEVEYIVSTNTVI 376
>gi|390407703|ref|NP_001254578.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
gi|126697524|gb|ABO26719.1| hypoxia-inducible factor 1 alpha [Gasterosteus aculeatus]
Length = 756
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLDRSVYEYYHALDSDHLNKTHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 310 KRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLS 343
>gi|213511440|ref|NP_001133494.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
gi|209154226|gb|ACI33345.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 628
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y ++H D D V L+ KG+ + YRFL K ++W +T+
Sbjct: 259 LVGYEPEDLIGKSAYKFHHALDSDHVTKSLHILLSKGQVCTSLYRFLAKSGGFVWAETQA 318
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 319 TVIYNNKTSQPEAVVCLNFILSVV 342
>gi|440202633|gb|AGB87123.1| period, partial [Crambus agitatellus]
Length = 338
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KPV+F M N + D + P +GYLP ++LG YH DDL + +E ++ K
Sbjct: 113 KPVSFVMRHAANGNLEYIDPESVPYLGYLPQDILGKYMLQLYHQDDLPYLTQVYETIVTK 172
Query: 63 GE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
G S YR +T+ Q I L+T + + W+ K EF++ H ++ D Q P
Sbjct: 173 GGLARSKPYRMMTQNQDCIKLETEWSSFINPWSRKLEFVIGKHHIIQ--GPTNPDVFQTP 230
Query: 122 DSEEQSN 128
D+E+ S
Sbjct: 231 DTEKASK 237
>gi|122892549|gb|ABM67323.1| EPAS1 [Hylobates klossii]
Length = 81
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 1 LIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 60
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ Y+ N +P+ I+C + V+
Sbjct: 61 TVIYNPRNLQPQCIMCVNYVL 81
>gi|407316780|gb|AFU07572.1| hypoxia-inducible factor 3 alpha subunit [Acipenser sinensis]
Length = 530
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 52/84 (61%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y+Y+H D D V + L+ KG+ + +YRFL K ++W +T+
Sbjct: 249 LLGYSPEDLIGHSAYEYHHALDTDHVTKSLQILLSKGQVCTGHYRFLVKHGGFVWAETQA 308
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ ++ PE +VC + ++S V
Sbjct: 309 TVLYNSKSTLPEAVVCINFILSGV 332
>gi|37594329|gb|AAQ94179.1| Hif3a [Danio rerio]
Length = 626
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S ++++H D D V L KG+ + YRFLTK ++W +T+
Sbjct: 251 LVGYQPDDLIGRSAFEFFHALDFDHVSRSLHILFSKGQVCTGQYRFLTKNGGFVWTETQA 310
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 311 TVLYNSRTSQPEAVVCLNFILSGV 334
>gi|164600800|gb|ABY61826.1| aryl hydrocarbon receptor nuclear translocator-like protein [Ovis
aries]
Length = 145
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 30 YLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG--TSCYYRFLTKGQQWIWLQTRFY 87
YLP E+LGTS Y+Y+H DD+ + CH ++Q E T+C Y+F K +I L++R++
Sbjct: 1 YLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNC-YKFKIKDGSFITLRSRWF 59
Query: 88 ITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP---------DSEEQSNDTGP 132
+ W + E+IV T+ VV NVL + +P DS S + GP
Sbjct: 60 SFMNPWTKEVEYIVSTNTVV-LANVLEGGDPSLPQLTASPHSMDSMLPSGEGGP 112
>gi|348531168|ref|XP_003453082.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Oreochromis
niloticus]
Length = 766
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ + YR L
Sbjct: 250 MKFTYCDERITDLMGYDPEDLLDRSVYEYYHALDSDHLTKTHHNLFAKGQVCTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +VC + V+S
Sbjct: 310 KKGGFVWVETQATVIYNNKNSQPQCVVCVNFVLS 343
>gi|241694426|ref|XP_002402207.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
gi|215504696|gb|EEC14190.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
Length = 135
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE 57
D APPIIGYLPFEVLGTSGYDYYHVDDL+ V E
Sbjct: 91 DHRAPPIIGYLPFEVLGTSGYDYYHVDDLEKVAAGQE 127
>gi|47230125|emb|CAG10539.1| unnamed protein product [Tetraodon nigroviridis]
Length = 385
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D + H L KG+ + YR L K ++WL+T+
Sbjct: 305 LMGYDPEDLLNRSVYEYYHAQDSDHLTKTHHNLFAKGQVCTGQYRMLAKRGGFVWLETQA 364
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ Y+ NS+P+ +VC + V+
Sbjct: 365 TVIYNTKNSQPQCVVCVNFVL 385
>gi|440202667|gb|AGB87140.1| period, partial [Cliniodes opalalis]
Length = 337
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
V KPV F M N + D + P +GYLP +V+G YH DDL + +E +
Sbjct: 112 VVMKPVPFVMRHAANGNLEYIDPESVPYLGYLPHDVIGKDALQLYHTDDLCYLSQVYETI 171
Query: 60 MQKGEGTSCY-YRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+++G T C YR LT+ +I L+T + + W+ K EF++ H ++
Sbjct: 172 VKEGGLTRCKPYRMLTQNGNYIKLETEWSSFINPWSRKLEFVIGKHYIL 220
>gi|166998249|ref|NP_001107795.1| CYCLE [Tribolium castaneum]
gi|140270864|gb|ABO86538.1| CYCLE [Tribolium castaneum]
Length = 675
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCY-YRFLTKGQQW 79
D A ++G+L E+LG+S Y+YYH DD+ SV CH++ +Q E T+ YRF TK +
Sbjct: 404 DQRATLVLGFLQQELLGSSMYEYYHHDDITSVAECHKSALQNSEHTTTKIYRFRTKDGGF 463
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+ LQ+ + + W + E+++ + +V
Sbjct: 464 VKLQSEWKSFKNPWTKEIEYLIAKNTLV 491
>gi|383856080|ref|XP_003703538.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Megachile rotundata]
Length = 668
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 353 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKMKGQVVSVMYRFRAKNRDWVWLRTS 412
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N + E+IVCT+
Sbjct: 413 AFAFLNPFNDEVEYIVCTN 431
>gi|3184400|dbj|BAA28711.1| period protein [Chymomyza costata]
Length = 1018
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL ++ +E +M+KG+ S YRFL +
Sbjct: 336 DNAAVSALGYLPQDLIGRSILDFYHAEDLFTMKETYETVMRKGQTAGASFCSKPYRFLIQ 395
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQS 127
++ L+T + + W+ K EF+ C H VV NV + N P E+S
Sbjct: 396 NGCYVLLETEWTSFVNPWSRKLEFVTCHHSVVQGPKQCNVFEQPPNVKPKISEES 450
>gi|242021051|ref|XP_002430960.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516180|gb|EEB18222.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 671
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P E+LG S +D++HV+D + E +++ KG+ S YRF K ++W+WL+T
Sbjct: 360 LLGYTPPELLGKSCFDFFHVEDQTHMKESFEQVLKLKGQLMSVIYRFRAKNREWVWLRTS 419
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + + + E+IVCT+
Sbjct: 420 AFAFLNPYTDEVEYIVCTN 438
>gi|126697526|gb|ABO26720.1| hypoxia-inducible factor 1 alpha [Platichthys flesus]
Length = 778
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D + H L KG+ ++ YR L
Sbjct: 250 MKFTYCDERITELMGYDPEDLLNRSVYEYYHAMDSDHLTKSHHNLFAKGQVSTGQYRMLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ Y+ NS+P+ +VC + V+S
Sbjct: 310 KRGGFVWVETQATDIYNNKNSQPQCVVCVNFVLS 343
>gi|350585333|ref|XP_003356031.2| PREDICTED: hypoxia-inducible factor 3-alpha [Sus scrofa]
Length = 385
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++G S Y+Y H D D+V AL+ KG+ + YRFL + ++W QT+
Sbjct: 198 VAGYRPDDLIGCSAYEYIHALDSDAVGQSIHALLSKGQAVTGQYRFLARSGGYLWTQTQA 257
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
+ + E IVC H ++S V
Sbjct: 258 TVVSGGRGPQSESIVCVHFLISQVE 282
>gi|371534936|gb|AEX32873.1| tango protein [Aedes aegypti]
Length = 570
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE-ALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + E L QKG+ S YRF K ++W+W++T+
Sbjct: 307 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFEQVLKQKGQMFSVMYRFRAKNKEWVWMRTQ 366
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + E++VCT+
Sbjct: 367 AYAFLNPYTDDIEYVVCTN 385
>gi|126697514|gb|ABO26714.1| hypoxia-inducible factor 1 alpha [Thymallus thymallus]
Length = 745
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++ Y P ++L S Y+YYH D D ++ H L KG+ ++ YR L K ++W++T+
Sbjct: 263 LMDYDPEDLLNHSVYEYYHALDSDHLMKAHHNLFAKGQVSTGQYRMLAKRGGFVWVETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ +VC + V+S
Sbjct: 323 TVIYNSKNSQPQCVVCVNYVLS 344
>gi|403299069|ref|XP_003940314.1| PREDICTED: hypoxia-inducible factor 3-alpha [Saimiri boliviensis
boliviensis]
Length = 633
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 250 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQV---------- 120
+ ++W QT+ + S+ E I+C H ++S V VL + +
Sbjct: 310 RSGGYLWTQTQATVVSGGRGSQSESIICVHFLISRVEETGVVLSLEQTEQHSRRPIRQGG 369
Query: 121 PDSEEQSNDTGPGDS 135
P ++ SN PGDS
Sbjct: 370 PSQKDASN---PGDS 381
>gi|148372331|gb|ABQ63087.1| hypoxia-inducible factor-1alpha [Callinectes sapidus]
Length = 497
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 54/96 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D A GYL E++G S Y+ +H D + + ++ L+ KG+ + YRFL
Sbjct: 213 MKFTYVDSNAKEFCGYLSEELVGRSVYELHHALDTNLIQDAYKNLLNKGQVETSRYRFLA 272
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+G ++WL T+ + + +KP+++VC + VVS V
Sbjct: 273 RGGGYVWLVTQATLIHGPRENKPQYVVCLNYVVSEV 308
>gi|321476879|gb|EFX87839.1| hypothetical protein DAPPUDRAFT_311851 [Daphnia pulex]
Length = 839
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y HV DL + H L+ KG+ T+ YYRFLT+ W+W+Q+
Sbjct: 269 LTGYEPQDLIEKTLYQYIHVGDLLHMRFAHHTLLFKGQVTTKYYRFLTRDGGWVWMQSYA 328
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
I ++ +S+P IV + V+S V
Sbjct: 329 TIVHNSRSSRPHCIVAVNYVLSDV 352
>gi|340717548|ref|XP_003397243.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus terrestris]
Length = 663
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 348 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 407
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 408 AFAFLNPYNDDVEYIVCTN 426
>gi|350407684|ref|XP_003488160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus impatiens]
Length = 663
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 348 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 407
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 408 AFAFLNPYNDDVEYIVCTN 426
>gi|328777731|ref|XP_394708.4| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Apis mellifera]
Length = 685
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 370 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 429
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 430 AFAFLNPYNDDVEYIVCTN 448
>gi|296234169|ref|XP_002762301.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Callithrix
jacchus]
Length = 668
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 248 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLA 307
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + S+ E I+C H ++S V
Sbjct: 308 RSGGYLWTQTQATVVSGGRGSQSESIICVHFLISRV 343
>gi|296234167|ref|XP_002762300.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Callithrix
jacchus]
Length = 670
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 250 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDFDAVSKSIHTLLSKGQAVTGQYRFLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + S+ E I+C H ++S V
Sbjct: 310 RSGGYLWTQTQATVVSGGRGSQSESIICVHFLISRV 345
>gi|297705238|ref|XP_002829488.1| PREDICTED: hypoxia-inducible factor 3-alpha, partial [Pongo abelii]
Length = 412
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++G S Y+Y H D D+V L+ KG+ + YRFL + ++W QT+
Sbjct: 4 VAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQA 63
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
+ + E IVC H ++S V
Sbjct: 64 TVVSGGRGPQSESIVCVHFLISQVE 88
>gi|198420580|ref|XP_002119436.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 641
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++G+ P +++ + Y Y H DL + H+ L+ KG+ + YYRFLT+ W+W+Q+
Sbjct: 254 LLGFEPQDLIEKTLYHYVHAGDLFHLKESHQKLLNKGQVKTKYYRFLTRHGGWVWVQSHV 313
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRD 116
I ++ +S+P IV + V+S +V +RD
Sbjct: 314 TIVHNSRSSRPHCIVSVNYVIS--DVEKRD 341
>gi|156368041|ref|XP_001627505.1| predicted protein [Nematostella vectensis]
gi|156214417|gb|EDO35405.1| predicted protein [Nematostella vectensis]
Length = 747
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 56 HEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLR- 114
++ +++ GE S YR K QWIWL++R Y++Y+ WNSKPEF T++VVS +
Sbjct: 483 NDNVLEYGESKSGPYRMRCKDNQWIWLKSRSYVSYNHWNSKPEFFCSTNQVVSSEEGIEG 542
Query: 115 RDNNQVPDSE-EQSNDTG 131
N QVP EQ D G
Sbjct: 543 LKNRQVPPRPFEQPTDLG 560
>gi|432110122|gb|ELK33901.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2
[Myotis davidii]
Length = 634
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
V KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD + + H+A+
Sbjct: 366 VKVKPTEFITRFAMNGKFVYVDQRATTILGYLPQELLGTSCYEYFHQDDHNKLTNKHKAV 425
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 426 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 474
>gi|157128070|ref|XP_001661300.1| single-minded [Aedes aegypti]
gi|108872709|gb|EAT36934.1| AAEL011013-PA [Aedes aegypti]
Length = 715
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H+ LM KG+ T+ YYRFLTKG W W+Q+
Sbjct: 291 LTGYEPQDLIEKTLYQYIHASDILHMRYSHQILMYKGQVTTKYYRFLTKGGGWTWVQSYA 350
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ ++ +S+P IV + V+S
Sbjct: 351 TVVHNTRSSRPHCIVSVNYVLS 372
>gi|157125925|ref|XP_001654450.1| aryl hydrocarbon receptor nuclear translocator (arnt protein)
(hypoxia-inducible factor 1 beta) [Aedes aegypti]
gi|108873460|gb|EAT37685.1| AAEL010343-PA, partial [Aedes aegypti]
Length = 505
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE-ALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + E L QKG+ S YRF K ++W+W++T+
Sbjct: 242 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFEQVLKQKGQMFSVMYRFRAKNKEWVWMRTQ 301
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + E++VCT+
Sbjct: 302 AYAFLNPYTDDIEYVVCTN 320
>gi|350585329|ref|XP_003127298.3| PREDICTED: LOW QUALITY PROTEIN: hypoxia-inducible factor
3-alpha-like [Sus scrofa]
Length = 776
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V AL+ KG+ + YRFL
Sbjct: 356 MKFTYCDERIAEVAGYRPDDLIGCSAYEYIHALDSDAVGQSIHALLSKGQAVTGQYRFLA 415
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQ----------V 120
+ ++W QT+ + + E IVC H ++S V VL + +
Sbjct: 416 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQVEETEVVLSLEQTERHSRRPIQRGT 475
Query: 121 PDSEEQSNDTGPGDS 135
P E+ N PGDS
Sbjct: 476 PSQEDAPN---PGDS 487
>gi|332018235|gb|EGI58840.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Acromyrmex echinatior]
Length = 612
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 299 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 358
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 359 AFAFLNPFNEDIEYIVCTN 377
>gi|82697061|gb|AAI08967.1| Arntl2 protein [Mus musculus]
Length = 578
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD S+ H+A+
Sbjct: 303 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAV 362
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNN 118
+Q E + Y+F K ++ L++ ++ + W + E+IV + +V + R
Sbjct: 363 LQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLVLGRSETRLSLL 422
Query: 119 QVPDSEEQSNDT 130
Q S + S D+
Sbjct: 423 QCGGSSQSSEDS 434
>gi|380030712|ref|XP_003698987.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Apis florea]
Length = 604
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG Y+++H +DL + E +++ KG+ S YRF K + W+WL+T
Sbjct: 289 ILGYTPSELLGHPCYEFFHPEDLTHMRESFEQVLKLKGQVVSVMYRFRAKNRDWVWLRTS 348
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + +N E+IVCT+
Sbjct: 349 AFAFLNPYNDDVEYIVCTN 367
>gi|148678771|gb|EDL10718.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Mus
musculus]
Length = 389
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN D A I+GYLP E+LGTS Y+Y+H DD S+ H+A+
Sbjct: 113 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAV 172
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNN 118
+Q E + Y+F K ++ L++ ++ + W + E+IV + +V + R
Sbjct: 173 LQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLVLGRSETRLSLL 232
Query: 119 QVPDSEEQSNDT 130
Q S + S D+
Sbjct: 233 QCGGSSQSSEDS 244
>gi|392347774|ref|XP_003749917.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Rattus norvegicus]
Length = 590
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 311 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHKAV 370
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 371 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 419
>gi|170048706|ref|XP_001870745.1| single-minded [Culex quinquefasciatus]
gi|167870723|gb|EDS34106.1| single-minded [Culex quinquefasciatus]
Length = 802
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H+ LM KG+ T+ YYRFLTKG W W+Q+
Sbjct: 391 LTGYEPQDLIEKTLYQYIHAADILQMRYSHQILMFKGQVTTKYYRFLTKGGGWTWVQSYA 450
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ ++ +S+P IV + V+S
Sbjct: 451 TVVHNTRSSRPHCIVSVNYVLS 472
>gi|350584322|ref|XP_003355586.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Sus scrofa]
Length = 725
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 5 KPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A++Q
Sbjct: 471 KPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHKAVLQS 530
Query: 63 GEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 531 KEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 576
>gi|390342499|ref|XP_781621.3| PREDICTED: circadian locomoter output cycles protein kaput-like
[Strongylocentrotus purpuratus]
Length = 318
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEA 58
D APPIIGYLPFEVLGTS Y+YY DDLD + CHEA
Sbjct: 272 DHRAPPIIGYLPFEVLGTSVYEYYQQDDLDKLGRCHEA 309
>gi|403269214|ref|XP_003926649.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Saimiri boliviensis boliviensis]
Length = 594
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 322 INVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 381
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 382 LQSKEKVLTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 430
>gi|15277629|gb|AAK93959.1| brain-muscle-ARNT-like protein 2a [Rattus norvegicus]
Length = 565
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 298 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHKAV 357
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 358 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 406
>gi|15147215|gb|AAK12620.1| brain-muscle-ARNT-like protein 2b [Rattus norvegicus]
Length = 531
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 264 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHKAV 323
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 324 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 372
>gi|379135494|gb|AFC93435.1| brain and muscle Arnt-like protein 2 variant d [Rattus norvegicus]
Length = 579
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 305 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHKAV 364
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 365 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 413
>gi|194874376|ref|XP_001973390.1| GG13369 [Drosophila erecta]
gi|190655173|gb|EDV52416.1| GG13369 [Drosophila erecta]
Length = 413
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ E+I+ + V
Sbjct: 385 IQLQSEWRSFKNPWTSEIEYIIAKNSV 411
>gi|297206838|ref|NP_596882.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Rattus
norvegicus]
Length = 570
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 296 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPDELLGTSCYEYFHQDDHSNLSDKHKAV 355
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 356 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 404
>gi|295001556|gb|ADF58783.1| hypoxia-inducible factor 3 alpha subunit isoform 1 [Danio rerio]
Length = 626
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S ++++H D D V L KG+ + YRFL K ++W +T+
Sbjct: 251 LVGYQPDDLIGRSAFEFFHALDFDHVSRSLHILFSKGQVCTGQYRFLAKNGGFVWTETQA 310
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 311 TVLYNSRTSQPEAVVCLNFILSGV 334
>gi|15147217|gb|AAK12621.1| brain-muscle-ARNT-like protein 2c [Rattus norvegicus]
Length = 534
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 267 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLSDKHKAV 326
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 327 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 375
>gi|403269212|ref|XP_003926648.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Saimiri boliviensis boliviensis]
Length = 560
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 288 INVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 347
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 348 LQSKEKVLTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 396
>gi|307172407|gb|EFN63869.1| Single-minded-like protein 1 [Camponotus floridanus]
Length = 688
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L++KG+ T+ YYRFLTK W+W+Q+
Sbjct: 266 LTGYDPPDLIEKTLYHYVHGCDVLQLRHAHHILLRKGQVTTRYYRFLTKTGGWVWMQSYV 325
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGD 134
I ++ +S+P IV V+YV + + E++S+ + PG+
Sbjct: 326 TIVHNSRSSRPHCIVS----VNYVLTATESTGLILNCEQKSSCSSPGN 369
>gi|56785781|gb|AAW29028.1| hypoxia-inducible factor 4 alpha [Epinephelus coioides]
Length = 674
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y+++H D D V L+ KG+ ++ +YRFL ++W +T+
Sbjct: 259 LVGYKPEDLIGRSAYEFHHALDSDHVNKSLHTLLSKGQVSTRHYRFLANSGGFVWAETQA 318
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y SKP+ +VC + V+S V
Sbjct: 319 TVLYSSKMSKPKAVVCLNFVLSAV 342
>gi|407316776|gb|AFU07570.1| hypoxia-inducible factor 3 alpha subunit [Polypterus senegalus]
Length = 627
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S Y+Y+H D D + L+ KG+ ++ +YRFL K + W +T
Sbjct: 252 LLGYQPEDLIGRSAYEYHHALDSDHITKSFHILLSKGQMSTGHYRFLAKNGGFAWAETCA 311
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y++ +S+PE ++C ++S
Sbjct: 312 TVLYNRKSSQPEGVICLTFILS 333
>gi|41055377|ref|NP_956699.1| hypoxia-inducible factor 3-alpha [Danio rerio]
gi|32451899|gb|AAH54582.1| Hypoxia-inducible factor 1, alpha subunit, like [Danio rerio]
Length = 571
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 49/84 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S ++++H D D V L KG+ + YRFL K ++W +T+
Sbjct: 196 LVGYQPDDLIGRSAFEFFHALDFDHVSRSLHILFSKGQVCTGQYRFLAKNGGFVWTETQA 255
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ Y+ S+PE +VC + ++S V
Sbjct: 256 TVLYNSRTSQPEAVVCLNFILSGV 279
>gi|321473894|gb|EFX84860.1| putative hypoxia inducible factor-1 alpha [Daphnia pulex]
Length = 846
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +GY+P ++ G S Y +H D +S++ ++ + KG+ + YRFL
Sbjct: 268 MKYTYVDEKIYEFLGYMPEDLEGHSAYQLHHAQDNESILKSYKTMFTKGQIQTPPYRFLA 327
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
+ + W+QT+ + Y +S+P+ +VC H +S + D +Q+
Sbjct: 328 RHGGYAWVQTQATLVYGNRDSRPQAVVCVHTCLSEI----EDGDQI 369
>gi|345791952|ref|XP_543750.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Canis lupus familiaris]
Length = 1066
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 795 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 854
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 855 LQSKEKIFTDSYKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 903
>gi|281352847|gb|EFB28431.1| hypothetical protein PANDA_005354 [Ailuropoda melanoleuca]
Length = 621
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 349 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHKAV 408
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 409 LQSKEKIFTDSYKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 457
>gi|410964061|ref|XP_003988575.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2 [Felis catus]
Length = 708
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 436 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 495
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 496 LQSKEKIFTDSYKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNNLV 544
>gi|355564099|gb|EHH20599.1| Brain and muscle ARNT-like 2, partial [Macaca mulatta]
Length = 626
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 354 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 413
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 414 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 462
>gi|85726135|gb|ABC79590.1| BMAL2 [Mus musculus]
Length = 570
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD S+ H+A+
Sbjct: 303 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAV 362
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L++ ++ + W ++ E+IV + +V
Sbjct: 363 LQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTNELEYIVSVNTLV 411
>gi|74275377|gb|ABA02179.1| hypoxia-inducible factor 1 alpha [Gallus gallus]
Length = 525
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 36 LGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNS 95
LG S Y+YYH D D + H + KG+ T+ YR L K ++W++T+ + Y+ NS
Sbjct: 1 LGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNS 60
Query: 96 KPEFIVCTHRVVS 108
+P+ IVC + V+S
Sbjct: 61 QPQCIVCVNYVLS 73
>gi|109689230|dbj|BAE96769.1| arylhydrocarbon receptor nuclear translocator homolog b isoform
[Anopheles stephensi]
Length = 740
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + + L QKG+ S YRF K ++W+W++T+
Sbjct: 322 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFDQVLKQKGQMFSVMYRFRAKNKEWVWMRTQ 381
Query: 86 FYITYHQWNSKPEFIVCT 103
Y + + E++VCT
Sbjct: 382 AYAFLNPYTDDIEYVVCT 399
>gi|301763481|ref|XP_002917162.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Ailuropoda melanoleuca]
Length = 692
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 420 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTNKHKAV 479
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 480 LQSKEKIFTDSYKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 528
>gi|402885499|ref|XP_003906192.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 3 [Papio anubis]
Length = 636
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 364 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|170058956|ref|XP_001865151.1| arylhydrocarbon receptor nuclear translocator [Culex
quinquefasciatus]
gi|167877846|gb|EDS41229.1| arylhydrocarbon receptor nuclear translocator [Culex
quinquefasciatus]
Length = 654
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALM-QKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + E ++ QKG+ S YRF K ++W+W++T+
Sbjct: 268 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFEQVIKQKGQMFSVMYRFRAKNKEWVWMRTQ 327
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + E++VCT+
Sbjct: 328 AYAFLNPYTDDIEYVVCTN 346
>gi|90074851|dbj|BAE87099.1| Single minded [Achaearanea tepidariorum]
Length = 755
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D + HE L+ KG+ T+ YYRFLTK WIW+Q+
Sbjct: 257 LTGYQPQDLIEKTLYHYIHASDCVQMRYSHETLLHKGQVTTKYYRFLTKDGGWIWMQSYA 316
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ ++ +S+P IV + V+
Sbjct: 317 TVVHNTRSSRPHCIVSVNYVL 337
>gi|109689228|dbj|BAE96768.1| arylhydrocarbon receptor nuclear translocator homolog a isoform
[Anopheles stephensi]
Length = 725
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + + L QKG+ S YRF K ++W+W++T+
Sbjct: 307 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFDQVLKQKGQMFSVMYRFRAKNKEWVWMRTQ 366
Query: 86 FYITYHQWNSKPEFIVCT 103
Y + + E++VCT
Sbjct: 367 AYAFLNPYTDDIEYVVCT 384
>gi|318037285|ref|NP_001187141.1| hypoxia induced factor-like factor [Ictalurus punctatus]
gi|73426664|gb|AAZ75953.1| hypoxia induced factor-like factor [Ictalurus punctatus]
Length = 627
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S YD+ H D D + L+ KG+ + +YRF ++W +T
Sbjct: 254 LVGYHPNDLIGRSAYDFIHALDFDHLTRSLHVLLSKGQVCTYHYRFWLVNGGFVWTETHV 313
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNTIKM 140
++ Y+ S+PE +VC + ++S V + + V E+ ++ + N I++
Sbjct: 314 HVLYNSRTSQPEAVVCLNFILSAV----EEADTVFSVEQTRSEVNQDEPNVIEV 363
>gi|3283366|gb|AAC39124.1| bHLH-PAS protein CYCLE [Drosophila melanogaster]
Length = 413
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKVVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|402885505|ref|XP_003906195.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 6 [Papio anubis]
Length = 585
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 313 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 372
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 373 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 421
>gi|297262024|ref|XP_001103326.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like isoform 1 [Macaca mulatta]
Length = 622
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 350 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|170578599|ref|XP_001894474.1| bHLH-PAS transcription factor [Brugia malayi]
gi|158598920|gb|EDP36684.1| bHLH-PAS transcription factor, putative [Brugia malayi]
Length = 298
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D ++GY F++LGTSGYDY H +DL V H LM+ G +R TK QWI
Sbjct: 146 DAKGCQLLGYSRFDLLGTSGYDYIHTNDLLQVAENHTQLMELGTYQIRSHRLRTKSHQWI 205
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSND 129
W+ I + + + C +RV+S NV + N V ++ +S +
Sbjct: 206 WVNCMAVI---ENEISFKRVRCNYRVISMENVKKFKEN-VTSTKRKSTE 250
>gi|3184402|dbj|BAA28712.1| period protein [Chymomyza costata]
Length = 1016
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL ++ +E +M+KG+ S YRFL +
Sbjct: 336 DNAAVSALGYLPQDLIGRSILDFYHAEDLFTMKETYETVMRKGQTAGASFCSKPYRFLIQ 395
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQS 127
++ L+T + + W+ K EF+ C H V NV + N P E+S
Sbjct: 396 NGCYVLLETEWTSFVNPWSRKLEFVTCHHSVFQGPKQCNVFEQPPNVKPKISEES 450
>gi|297262020|ref|XP_002798548.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 636
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 364 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|291227639|ref|XP_002733787.1| PREDICTED: hypoxia inducible factor, partial [Saccoglossus
kowalevskii]
Length = 777
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I GY +++G S YD+ H D D + + L KG+ ++ YRFL K ++W+QT+
Sbjct: 193 ITGYQVSDLIGKSAYDFCHALDTDKIEKSYHDLYAKGQTSTGQYRFLAKKGGYVWVQTQA 252
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ SKP+ IV + V+S
Sbjct: 253 TVIYNNRTSKPQCIVSVNYVLS 274
>gi|402885503|ref|XP_003906194.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 5 [Papio anubis]
Length = 622
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 350 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|95007805|dbj|BAE94239.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 668
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D A ++GY P E+LG +D++H +D+ + E +++ KG+ S YRF +K
Sbjct: 335 TFVDQRALNLLGYSPPELLGKICFDFFHPEDVSHMKESFEQVLKLKGQVMSVMYRFRSKS 394
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTH 104
+ WIWL+T + + + + E+IVCT+
Sbjct: 395 RDWIWLRTSAFAFLNPYTDEVEYIVCTN 422
>gi|355669555|gb|AER94566.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Mustela
putorius furo]
Length = 576
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 340 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 399
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 400 LQSKEKIFTDLYKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 448
>gi|95007803|dbj|BAE94238.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 669
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D A ++GY P E+LG +D++H +D+ + E +++ KG+ S YRF +K
Sbjct: 336 TFVDQRALNLLGYSPPELLGKICFDFFHPEDVSHMKESFEQVLKLKGQVMSVMYRFRSKS 395
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTH 104
+ WIWL+T + + + + E+IVCT+
Sbjct: 396 RDWIWLRTSAFAFLNPYTDEVEYIVCTN 423
>gi|198465431|ref|XP_001353624.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
gi|198150156|gb|EAL31138.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
Length = 436
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ ++V H+ +MQ G+ T+ YRF K +
Sbjct: 348 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALVESHKIVMQVPGKLTTQVYRFRCKDSSY 407
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W ++ ++I+ + V
Sbjct: 408 IQLQSEWRAFKNPWTNEIDYIIAKNSV 434
>gi|355785980|gb|EHH66163.1| Brain and muscle ARNT-like 2, partial [Macaca fascicularis]
Length = 626
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 354 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 413
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 414 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 462
>gi|195128599|ref|XP_002008750.1| GI13667 [Drosophila mojavensis]
gi|193920359|gb|EDW19226.1| GI13667 [Drosophila mojavensis]
Length = 408
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H DD+ ++V H+ +MQ E T+ YRF K +
Sbjct: 320 DQRATLVIGFLPQEILGTSFYEYFHNDDISALVESHKMVMQVQETVTTQVYRFRCKDNGY 379
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W + ++I+ + V
Sbjct: 380 IQLQSEWRAFKNPWTNDIDYIIAKNSV 406
>gi|80474742|gb|AAI08966.1| Arntl2 protein [Mus musculus]
Length = 579
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD S+ H+A+
Sbjct: 303 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAV 362
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L++ ++ + W + E+IV + +V
Sbjct: 363 LQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLV 411
>gi|402885495|ref|XP_003906190.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Papio anubis]
Length = 588
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 316 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|149048952|gb|EDM01406.1| similar to aryl hydrocarbon receptor nuclear translocator-like 2,
isoform CRA_a [Rattus norvegicus]
Length = 357
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 83 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPDELLGTSCYEYFHQDDHSNLSDKHKAV 142
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W K E+IV + +V
Sbjct: 143 LQSKEKILTDSYKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLV 191
>gi|402885501|ref|XP_003906193.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 4 [Papio anubis]
Length = 551
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 279 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 338
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 339 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 387
>gi|395839342|ref|XP_003792551.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2 [Otolemur garnettii]
Length = 670
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 398 IKVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 457
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 458 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 506
>gi|297262022|ref|XP_002798549.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 588
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 316 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|26986633|ref|NP_758513.1| aryl hydrocarbon receptor nuclear translocator-like protein 2 [Mus
musculus]
gi|124007122|sp|Q2VPD4.2|BMAL2_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Brain and muscle ARNT-like 2
gi|15147211|gb|AAF88141.1| brain-muscle-ARNT-like protein 2a [Mus musculus]
Length = 579
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F MN +Y D A I+GYLP E+LGTS Y+Y+H DD S+ H+A+
Sbjct: 303 INVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAV 362
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L++ ++ + W + E+IV + +V
Sbjct: 363 LQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLV 411
>gi|402885497|ref|XP_003906191.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Papio anubis]
Length = 599
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 327 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|24667005|ref|NP_524168.2| cycle [Drosophila melanogaster]
gi|152031583|sp|O61734.2|CYCL_DROME RecName: Full=Protein cycle; AltName: Full=Brain and muscle
ARNT-like 1; Short=BMAL1; AltName: Full=MOP3
gi|7293738|gb|AAF49107.1| cycle [Drosophila melanogaster]
gi|94400444|gb|ABF17888.1| FI01122p [Drosophila melanogaster]
gi|220952316|gb|ACL88701.1| cyc-PA [synthetic construct]
gi|220958734|gb|ACL91910.1| cyc-PA [synthetic construct]
Length = 413
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|3192865|gb|AAD10629.1| brain and muscle ARNT-like 1 [Drosophila melanogaster]
gi|3219728|gb|AAC62235.1| MOP3 [Drosophila melanogaster]
gi|21430932|gb|AAM51144.1| SD27452p [Drosophila melanogaster]
Length = 413
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|109095995|ref|XP_001103493.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like isoform 3 [Macaca mulatta]
Length = 599
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 327 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|149056849|gb|EDM08280.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_b [Rattus
norvegicus]
Length = 382
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++G S Y+Y H D D+V L+ KG+ + YRFL + ++W QT+
Sbjct: 14 VAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQA 73
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
+ + E I+C H ++S V
Sbjct: 74 TVVSGGRGPQSESIICVHFLISRVE 98
>gi|195591633|ref|XP_002085543.1| GD12247 [Drosophila simulans]
gi|194197552|gb|EDX11128.1| GD12247 [Drosophila simulans]
Length = 413
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|223648522|gb|ACN11019.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 802
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++GY P ++L S Y+YYH D D ++ H L KG+ ++ YR L
Sbjct: 298 MKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLIKTHHNLFVKGQVSTGQYRMLA 357
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W++T+ + Y+ NS+P+ +V + V+S
Sbjct: 358 KIGGFVWVETQATVIYNNKNSQPQCVVSVNFVLS 391
>gi|195496129|ref|XP_002095562.1| GE22462 [Drosophila yakuba]
gi|194181663|gb|EDW95274.1| GE22462 [Drosophila yakuba]
Length = 413
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|195354268|ref|XP_002043620.1| GM16138 [Drosophila sechellia]
gi|194127788|gb|EDW49831.1| GM16138 [Drosophila sechellia]
Length = 413
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 325 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSY 384
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W S+ ++I+ + V
Sbjct: 385 IQLQSEWRAFKNPWTSEIDYIIAKNSV 411
>gi|410910578|ref|XP_003968767.1| PREDICTED: hypoxia-inducible factor 1-alpha-like [Takifugu
rubripes]
Length = 658
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S ++++H D D + L+ KG+ ++ +YRFL ++W +T+
Sbjct: 263 LVGYKPDDLIGRSAFEFHHALDSDHISKSLRTLLSKGQVSTRHYRFLANNGGFVWAETQA 322
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN----VLRRDNNQVPDSEEQSNDTGPGDSNT 137
+ Y S+PE IVC + ++S V V + E P DS+T
Sbjct: 323 TVLYSGKTSQPEAIVCLNFILSSVEQPEFVFSIEQVHSDPPEANVPALAPADSDT 377
>gi|312370962|gb|EFR19252.1| hypothetical protein AND_22808 [Anopheles darlingi]
Length = 798
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + + + QKG+ S YRF K ++WIW++T+
Sbjct: 241 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFDQVVKQKGQMFSVMYRFRAKNKEWIWMRTQ 300
Query: 86 FYITYHQWNSKPEFIVCTHRVVSYVN-----VLRRDNNQVPDS 123
Y + + E++VCT+ ++ V D N P S
Sbjct: 301 AYAFLNPYTDDIEYVVCTNSSAKALHSTHDTVTAPDQNDAPVS 343
>gi|224587377|gb|ACN58653.1| Hypoxia-inducible factor 1 alpha [Salmo salar]
Length = 498
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 50/82 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P ++L S Y+YYH D D ++ H L KG+ ++ YR L K ++W++T+
Sbjct: 6 LMGYDPEDLLNRSVYEYYHALDSDHLIKTHHNLFVKGQVSTGQYRMLAKIGGFVWVETQA 65
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
+ Y+ NS+P+ +V + V+S
Sbjct: 66 TVIYNNKNSQPQCVVSVNFVLS 87
>gi|158298639|ref|XP_318833.4| AGAP009748-PA [Anopheles gambiae str. PEST]
gi|157013981|gb|EAA14479.4| AGAP009748-PA [Anopheles gambiae str. PEST]
Length = 563
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P ++L S YD++H DD+ + + L QKG+ S YRF K ++W+W++T+
Sbjct: 239 VLGYQPVDLLNKSCYDFFHPDDIAHMKENFDQVLKQKGQMFSVMYRFRAKNKEWVWMRTQ 298
Query: 86 FYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEE 125
Y + + E++VCT+ S L ++ V E+
Sbjct: 299 AYAFLNPYTDDIEYVVCTN---SSAKALHSSHDTVTAPEQ 335
>gi|426226939|ref|XP_004007590.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 [Ovis aries]
Length = 638
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 367 IKVKPAEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 426
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + VV
Sbjct: 427 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTVV 475
>gi|189241710|ref|XP_967930.2| PREDICTED: similar to Single minded [Tribolium castaneum]
Length = 521
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L+ KG+ T+ YYRFL+KG W+W+Q+
Sbjct: 252 LTGYEPQDLIEKTLYHYIHGSDIMPMRFAHHQLLCKGQVTTKYYRFLSKGGGWVWMQSYA 311
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V+S
Sbjct: 312 TIVHNSRSSRPHCIVSVNYVLS 333
>gi|332232982|ref|XP_003265683.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 3 [Nomascus leucogenys]
Length = 622
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 350 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|332232980|ref|XP_003265682.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Nomascus leucogenys]
Length = 636
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 364 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|297691458|ref|XP_002823103.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 4 [Pongo abelii]
Length = 622
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 350 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|440900375|gb|ELR51526.1| hypothetical protein M91_13238 [Bos grunniens mutus]
Length = 634
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 363 IKVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 422
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + VV
Sbjct: 423 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTVV 471
>gi|332232978|ref|XP_003265681.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Nomascus leucogenys]
Length = 588
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 316 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|7963664|gb|AAF71306.1|AF231338_1 bHLH-PAS transcription factor MOP9 [Homo sapiens]
Length = 585
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 313 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 372
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 373 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 421
>gi|297691456|ref|XP_002823102.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pongo abelii]
Length = 636
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 364 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|297691452|ref|XP_002823100.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pongo abelii]
Length = 599
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|260830027|ref|XP_002609963.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
gi|229295325|gb|EEN65973.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
Length = 506
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 6 PVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-K 62
P F M+ T D P++GY P ++LG + +D+YH +D ++ E +++ K
Sbjct: 367 PTEFISRHSMDGKFTFVDQRVIPVLGYQPTDLLGKTCFDFYHPEDQPNLKESFEQVLKMK 426
Query: 63 GEGTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
G+ S YR K +W+WL+T + + + + E+IVCT+ V
Sbjct: 427 GQVMSVMYRCRAKNGEWVWLRTSLFSFQNPYTDEVEYIVCTNTSV 471
>gi|374279662|gb|AEZ04012.1| hypoxia-inducible factor alpha, partial [Callinectes sapidus]
Length = 1026
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 53/96 (55%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D GYL E++G S Y+ +H D + + ++ L+ KG+ + YRFL
Sbjct: 223 MKFTYVDSNVKEFCGYLSEELVGRSVYELHHALDTNLIQDAYKNLLNKGQVETSRYRFLA 282
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+G ++WL T+ + + +KP+++VC + VVS V
Sbjct: 283 RGGGYVWLVTQATLIHGPRENKPQYVVCLNYVVSEV 318
>gi|9279803|dbj|BAB01485.1| transcription factor BMAL2 [Homo sapiens]
Length = 551
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 279 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 338
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 339 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 387
>gi|297691454|ref|XP_002823101.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pongo abelii]
Length = 588
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 316 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|397517391|ref|XP_003828897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Pan paniscus]
Length = 584
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 313 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 372
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 373 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 421
>gi|351721418|ref|NP_001234931.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 2 [Homo sapiens]
gi|17979652|gb|AAL50340.1|AF246961_1 brain-muscle-ARNT-like transcription factor 2b [Homo sapiens]
Length = 622
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 350 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|332839704|ref|XP_003313824.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pan troglodytes]
Length = 635
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 364 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|7963667|gb|AAF71307.1|AF231339_1 bHLH-PAS transcription factor MOP9 [Homo sapiens]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 300 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 359
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 360 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 408
>gi|397517389|ref|XP_003828896.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Pan paniscus]
Length = 550
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 279 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 338
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 339 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 387
>gi|332839706|ref|XP_003313825.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pan troglodytes]
Length = 621
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 350 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 409
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 410 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 458
>gi|11345223|gb|AAG34652.1|AF256215_1 cycle-like factor CLIF [Homo sapiens]
gi|119616958|gb|EAW96552.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_a [Homo sapiens]
Length = 602
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 330 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 389
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 390 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 438
>gi|34782868|gb|AAH00172.3| ARNTL2 protein, partial [Homo sapiens]
Length = 578
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 306 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 365
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 366 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 414
>gi|297262026|ref|XP_002798550.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 540
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 327 IHVKPTEFITRFAMNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|31745180|ref|NP_064568.3| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 1 [Homo sapiens]
gi|124007121|sp|Q8WYA1.2|BMAL2_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP9; AltName: Full=Brain and muscle ARNT-like
2; AltName: Full=CYCLE-like factor; Short=CLIF; AltName:
Full=Class E basic helix-loop-helix protein 6;
Short=bHLHe6; AltName: Full=Member of PAS protein 9;
AltName: Full=PAS domain-containing protein 9
gi|17979650|gb|AAL50339.1|AF246960_1 brain-muscle-ARNT-like transcription factor 2a [Homo sapiens]
gi|119616960|gb|EAW96554.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_c [Homo sapiens]
Length = 636
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 364 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 423
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 424 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 472
>gi|332839700|ref|XP_520811.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pan troglodytes]
Length = 587
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 316 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|351721480|ref|NP_001234933.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 4 [Homo sapiens]
gi|17979656|gb|AAL50342.1|AF246963_1 brain-muscle-ARNT-like transcription factor 2d [Homo sapiens]
gi|115527957|gb|AAI25062.1| ARNTL2 protein [Homo sapiens]
Length = 588
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 316 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 375
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 376 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 424
>gi|351721450|ref|NP_001234932.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 3 [Homo sapiens]
gi|17979654|gb|AAL50341.1|AF246962_1 brain-muscle-ARNT-like transcription factor 2c [Homo sapiens]
gi|115529029|gb|AAI25063.1| ARNTL2 protein [Homo sapiens]
gi|119616959|gb|EAW96553.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_b [Homo sapiens]
Length = 599
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|332839702|ref|XP_003313823.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pan troglodytes]
Length = 598
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|390346232|ref|XP_781474.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 760
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE-ALMQKGEGTSCYYRFLTKG 76
T D ++GY P E+LG S +++YH +D + E A+ KG+ S YRF K
Sbjct: 332 TFVDQRVTGVLGYQPQELLGKSSFEFYHNEDQSHLKDSFEQAVKLKGQMLSLMYRFQAKS 391
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN 111
+ W+WL+T + + + + E+IVCT+ + +
Sbjct: 392 RDWVWLRTSCFSFQNPYTDEVEYIVCTNTAIKNIQ 426
>gi|326673039|ref|XP_001337610.2| PREDICTED: hypoxia-inducible factor 1-alpha [Danio rerio]
Length = 730
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++G+ P +VL S Y+YYH D D + H +L KG+ + YR L
Sbjct: 328 MRFTYCDERITELLGFDPEDVLQHSVYEYYHALDSDHMTKTHHSLFVKGQVCTGQYRLLA 387
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W +T+ + Y+ NS+ + +VC + ++S
Sbjct: 388 KAGGFVWAETQATVIYNSKNSQAQCVVCVNYILS 421
>gi|118343659|ref|NP_001071651.1| transcription factor protein [Ciona intestinalis]
gi|70568858|dbj|BAE06305.1| transcription factor protein [Ciona intestinalis]
Length = 865
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY ++ SGY++ H D+ H LM+KGE +R L K +WIW+
Sbjct: 314 VLGYTEQQLRQRSGYEFVHSADMMHCADAHTKLMRKGESGLTVFRLLHKNNKWIWVTASA 373
Query: 87 YITYHQWNSKPEFIVCTHRVV 107
+ + N++P++I+ THR +
Sbjct: 374 RLVFR--NNRPDYIISTHRPI 392
>gi|270001213|gb|EEZ97660.1| hypothetical protein TcasGA2_TC016205 [Tribolium castaneum]
Length = 314
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L+ KG+ T+ YYRFL+KG W+W+Q+
Sbjct: 45 LTGYEPQDLIEKTLYHYIHGSDIMPMRFAHHQLLCKGQVTTKYYRFLSKGGGWVWMQSYA 104
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V+S
Sbjct: 105 TIVHNSRSSRPHCIVSVNYVLS 126
>gi|119892837|ref|XP_615908.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|297475095|ref|XP_002687774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|296487336|tpg|DAA29449.1| TPA: aryl hydrocarbon receptor nuclear translocator-like 2-like
[Bos taurus]
Length = 704
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N +Y D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 433 IKVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 492
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + VV
Sbjct: 493 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTVV 541
>gi|390346230|ref|XP_003726505.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 747
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHE-ALMQKGEGTSCYYRFLTKG 76
T D ++GY P E+LG S +++YH +D + E A+ KG+ S YRF K
Sbjct: 319 TFVDQRVTGVLGYQPQELLGKSSFEFYHNEDQSHLKDSFEQAVKLKGQMLSLMYRFQAKS 378
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN 111
+ W+WL+T + + + + E+IVCT+ + +
Sbjct: 379 RDWVWLRTSCFSFQNPYTDEVEYIVCTNTAIKNIQ 413
>gi|195173139|ref|XP_002027351.1| GL15678 [Drosophila persimilis]
gi|194113194|gb|EDW35237.1| GL15678 [Drosophila persimilis]
Length = 436
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ ++V H+ +MQ E T+ YRF K +
Sbjct: 348 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALVESHKIVMQVPEKLTTQVYRFRCKDSSY 407
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W ++ ++I+ + V
Sbjct: 408 IQLQSEWRAFKNPWTNEIDYIIAKNSV 434
>gi|18448895|gb|AAL69947.1|AF463492_1 inhibitory PAS domain protein [Homo sapiens]
gi|119577814|gb|EAW57410.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_c [Homo
sapiens]
gi|167735809|dbj|BAG07185.1| hypoxia-inducible factor-3alpha2 [Homo sapiens]
Length = 632
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 344
>gi|23065535|ref|NP_690007.1| hypoxia-inducible factor 3-alpha isoform a [Homo sapiens]
gi|4558637|gb|AAD22668.1|AC007193_2 Putative homolog of hypoxia inducible factor three alpha [Homo
sapiens]
gi|16040975|dbj|BAB69689.1| hypoxia-inducible factor-3 alpha [Homo sapiens]
gi|119577816|gb|EAW57412.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_e [Homo
sapiens]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 342
>gi|14042618|dbj|BAB55324.1| unnamed protein product [Homo sapiens]
Length = 632
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 344
>gi|189054460|dbj|BAG37233.1| unnamed protein product [Homo sapiens]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 342
>gi|119577815|gb|EAW57411.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_d [Homo
sapiens]
Length = 614
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 344
>gi|90421311|ref|NP_690008.2| hypoxia-inducible factor 3-alpha isoform c [Homo sapiens]
gi|145558932|sp|Q9Y2N7.2|HIF3A_HUMAN RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=Class E basic helix-loop-helix protein 17;
Short=bHLHe17; AltName: Full=HIF3-alpha-1; AltName:
Full=Inhibitory PAS domain protein; Short=IPAS; AltName:
Full=Member of PAS protein 7; AltName: Full=PAS
domain-containing protein 7
gi|261858714|dbj|BAI45879.1| hypoxia inducible factor 3, alpha subunit [synthetic construct]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 344
>gi|195379458|ref|XP_002048496.1| GJ14003 [Drosophila virilis]
gi|194155654|gb|EDW70838.1| GJ14003 [Drosophila virilis]
Length = 407
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IGYLP E+LGTS Y+Y+H +D+ ++V H+ +MQ E T+ YRF K +
Sbjct: 319 DQRATLVIGYLPQEILGTSFYEYFHNEDITALVESHKMVMQLHENVTTQIYRFRCKDNGY 378
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
+ LQ+ + + W + ++I+ + V
Sbjct: 379 VQLQSEWRAFKNPWTNDIDYIIAKNSV 405
>gi|410046905|ref|XP_003952280.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Pan troglodytes]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|426389304|ref|XP_004061063.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Gorilla
gorilla gorilla]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 342
>gi|426389302|ref|XP_004061062.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Gorilla
gorilla gorilla]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|397493291|ref|XP_003817542.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Pan
paniscus]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 342
>gi|397493289|ref|XP_003817541.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Pan
paniscus]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|332257099|ref|XP_003277653.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Nomascus
leucogenys]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 342
>gi|332257097|ref|XP_003277652.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Nomascus
leucogenys]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|114677981|ref|XP_001167523.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Pan
troglodytes]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 342
>gi|51874048|gb|AAH80551.1| Hypoxia inducible factor 3, alpha subunit [Homo sapiens]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|351721535|ref|NP_001234934.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 5 [Homo sapiens]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|119577813|gb|EAW57409.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_b [Homo
sapiens]
Length = 580
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 193 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 252
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 253 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 288
>gi|444730767|gb|ELW71141.1| Hypoxia-inducible factor 3-alpha [Tupaia chinensis]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 253 MKFTYCDERIADVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 312
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 313 RSGGYLWTQTQATVVSGGRGPQAESIVCVHFLISRV 348
>gi|297691460|ref|XP_002823104.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pongo abelii]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKIFTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|307198404|gb|EFN79346.1| Single-minded-like protein 1 [Harpegnathos saltator]
Length = 774
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L+ KG+ T+ YYRFLTK W+W+Q+
Sbjct: 349 LTGYDPPDLIEKTLYHYVHAADVVHLRQAHRLLLCKGQVTTRYYRFLTKNGGWVWMQSYV 408
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGD 134
I ++ +S+P IV V+YV + + + E++ + PG+
Sbjct: 409 TIVHNSRSSRPHCIVS----VNYVLTAAENAGLILNCEQKLPCSSPGN 452
>gi|221041476|dbj|BAH12415.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD +++ H+A+
Sbjct: 327 INVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 387 LQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 435
>gi|402906004|ref|XP_003915797.1| PREDICTED: hypoxia-inducible factor 3-alpha [Papio anubis]
Length = 632
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RNGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|355703683|gb|EHH30174.1| hypothetical protein EGK_10787 [Macaca mulatta]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RNGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|297277409|ref|XP_002801349.1| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 2 [Macaca
mulatta]
Length = 667
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 307 RNGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 342
>gi|297277407|ref|XP_001108464.2| PREDICTED: hypoxia-inducible factor 3-alpha-like isoform 1 [Macaca
mulatta]
Length = 669
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RNGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|119577817|gb|EAW57413.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_f [Homo
sapiens]
Length = 567
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 275
>gi|426389306|ref|XP_004061064.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Gorilla
gorilla gorilla]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|332257101|ref|XP_003277654.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Nomascus
leucogenys]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|260279074|dbj|BAI44114.1| cycle protein [Bactrocera cucurbitae]
Length = 401
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS YDY+H DD+ ++ H+ ++Q E T+ YRF K +
Sbjct: 313 DQRATLVIGFLPQEMLGTSFYDYFHHDDVPALAESHKMVIQVPEKVTTQVYRFRCKDNTF 372
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W + E+I+ + V
Sbjct: 373 IQLQSEWKAFKNPWTTDIEYIIAKNTV 399
>gi|149056848|gb|EDM08279.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Rattus
norvegicus]
Length = 627
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQS 127
+ ++W QT+ + + E I+C H ++S R + N V S EQ+
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLIS-----RVEENGVVLSLEQT 354
>gi|11968112|ref|NP_071973.1| hypoxia-inducible factor 3-alpha [Rattus norvegicus]
gi|81917470|sp|Q9JHS2.1|HIF3A_RAT RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName: Full=HIF3-alpha-1
gi|8953575|emb|CAB96611.1| hypoxia inducible factor 3 alpha [Rattus norvegicus]
Length = 662
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQS 127
+ ++W QT+ + + E I+C H ++S R + N V S EQ+
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLIS-----RVEENGVVLSLEQT 354
>gi|397493293|ref|XP_003817543.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
paniscus]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|332257105|ref|XP_003277656.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 5 [Nomascus
leucogenys]
Length = 621
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 198 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 257
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 258 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 293
>gi|326807022|ref|NP_071907.4| hypoxia-inducible factor 3-alpha isoform b [Homo sapiens]
gi|194387600|dbj|BAG60164.1| unnamed protein product [Homo sapiens]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 275
>gi|332856288|ref|XP_001167499.2| PREDICTED: hypoxia-inducible factor 3-alpha isoform 3 [Pan
troglodytes]
Length = 600
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|10432879|dbj|BAB13865.1| unnamed protein product [Homo sapiens]
Length = 648
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 193 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 252
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 253 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 288
>gi|395854188|ref|XP_003799580.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Otolemur
garnettii]
Length = 666
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 246 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 305
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 306 RSGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 341
>gi|195427561|ref|XP_002061845.1| GK17217 [Drosophila willistoni]
gi|194157930|gb|EDW72831.1| GK17217 [Drosophila willistoni]
Length = 410
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ ++V H+ +MQ E T+ YRF K +
Sbjct: 322 DQRATLVIGFLPQEILGTSFYEYFHSEDIGALVESHKMVMQVPEKVTTQVYRFRCKDNGY 381
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W + ++I+ + V
Sbjct: 382 IQLQSEWRAFKNPWTNDIDYIIAKNSV 408
>gi|74190472|dbj|BAE25907.1| unnamed protein product [Mus musculus]
Length = 470
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 55 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 114
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQS 127
+ ++W QT+ + + E I+C H ++S R + N V S EQ+
Sbjct: 115 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLIS-----RVEENGVVLSLEQT 162
>gi|355755960|gb|EHH59707.1| hypothetical protein EGM_09889, partial [Macaca fascicularis]
Length = 665
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLTKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RNGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|194389168|dbj|BAG61601.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 198 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 257
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 258 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 293
>gi|426389308|ref|XP_004061065.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Gorilla
gorilla gorilla]
Length = 450
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|321479053|gb|EFX90009.1| putative aryl hydrocarbon receptor nuclear translocator [Daphnia
pulex]
Length = 669
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D A ++GY P E+LG +D +H +D+ + E +++ KG+ S YRF +K
Sbjct: 335 TFVDQRALNLLGYSPPELLGKICFDLFHPEDVSHMKESFEQVLKLKGQVMSVMYRFRSKS 394
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTH 104
+ WIWL+T + + + + E+IVCT+
Sbjct: 395 RDWIWLRTSAFAFLNPYTDEVEYIVCTN 422
>gi|440907533|gb|ELR57674.1| Hypoxia-inducible factor 3-alpha, partial [Bos grunniens mutus]
Length = 660
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 240 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 299
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 300 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 335
>gi|426243045|ref|XP_004015376.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Ovis aries]
Length = 609
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|426243043|ref|XP_004015375.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 1 [Ovis aries]
Length = 678
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|338710541|ref|XP_001500830.3| PREDICTED: hypoxia-inducible factor 3-alpha [Equus caballus]
Length = 588
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 169 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 228
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 229 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 264
>gi|157502175|ref|NP_001098812.1| hypoxia-inducible factor 3-alpha [Bos taurus]
gi|157279353|gb|AAI53227.1| HIF3A protein [Bos taurus]
gi|296477442|tpg|DAA19557.1| TPA: hypoxia inducible factor 3, alpha subunit [Bos taurus]
Length = 669
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 344
>gi|332856290|ref|XP_003316502.1| PREDICTED: hypoxia-inducible factor 3-alpha [Pan troglodytes]
Length = 450
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|332257103|ref|XP_003277655.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 4 [Nomascus
leucogenys]
Length = 459
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 275
>gi|395854190|ref|XP_003799581.1| PREDICTED: hypoxia-inducible factor 3-alpha isoform 2 [Otolemur
garnettii]
Length = 600
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 275
>gi|9076|emb|CAA32082.1| per protein [Drosophila pseudoobscura]
Length = 1241
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D YH DDL + +E++M+KG+ S YRFL +
Sbjct: 367 DSAAVSALGYLPQDLMGRSIMDLYHHDDLPVIKEIYESVMKKGQTAGASFCSKPYRFLIQ 426
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQ 126
+I L+T + + W+ K EF+V HRV NV N P E+
Sbjct: 427 NGCYILLETEWSSFVNPWSRKLEFVVGHHRVFQGPKICNVFETPPNSEPKIAEE 480
>gi|351697932|gb|EHB00851.1| Hypoxia-inducible factor 3 alpha, partial [Heterocephalus glaber]
Length = 658
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 241 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 300
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 301 RSGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 336
>gi|348557855|ref|XP_003464734.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Cavia porcellus]
Length = 667
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 344
>gi|283806656|ref|NP_001164574.1| cycle [Acyrthosiphon pisum]
gi|283483352|emb|CAX37106.1| cycle [Acyrthosiphon pisum]
Length = 648
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSC-YYRFLTKGQQWIWLQTR 85
I+G+LP E+LGTS Y+Y+H DD+ +V H+A +Q+ + Y+F K + ++ L++
Sbjct: 367 IVGFLPQELLGTSMYEYFHQDDIARLVNIHKATLQECKPKDTEIYKFRAKNKTFVNLRSS 426
Query: 86 FYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDS 135
+ + W EFIV N+L R + + PDS +S + G S
Sbjct: 427 WKSFRNPWTKDIEFIVAN-------NILTRTDFK-PDSSNKSECSSQGQS 468
>gi|410982678|ref|XP_003997675.1| PREDICTED: hypoxia-inducible factor 3-alpha [Felis catus]
Length = 600
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN----VL---------RRDNNQVP 121
+ ++W QT+ + + E IVC H ++S V VL RR +
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETGVVLSLEQTERHSRRPAQRGT 299
Query: 122 DSEEQSNDTGPGDS 135
S++ + D PGDS
Sbjct: 300 PSQKDAPD--PGDS 311
>gi|308197282|gb|ADO17753.1| single-minded protein [Parhyale hawaiensis]
Length = 597
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H DL V H L+ KG+ TS YYRFLT+ W+W+Q+
Sbjct: 240 LTGYQPQDLIEKTLYQYVHGCDLMHVRGAHTMLLLKGQVTSKYYRFLTQNGGWVWVQSCA 299
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNV 112
I ++ +S P +V + V+S + V
Sbjct: 300 TIVHNSRSSGPHCVVAVNYVLSDIEV 325
>gi|198467901|ref|XP_001354548.2| period [Drosophila pseudoobscura pseudoobscura]
gi|218512121|sp|P12348.3|PER_DROPS RecName: Full=Period circadian protein
gi|198146159|gb|EAL31601.2| period [Drosophila pseudoobscura pseudoobscura]
Length = 1271
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D YH DDL + +E++M+KG+ S YRFL +
Sbjct: 367 DSAAVSALGYLPQDLMGRSIMDLYHHDDLPVIKEIYESVMKKGQTAGASFCSKPYRFLIQ 426
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQ 126
+I L+T + + W+ K EF+V HRV NV N P E+
Sbjct: 427 NGCYILLETEWSSFVNPWSRKLEFVVGHHRVFQGPKICNVFETPPNSEPKIAEE 480
>gi|23065541|ref|NP_690009.1| hypoxia-inducible factor 3-alpha isoform d [Homo sapiens]
gi|119577812|gb|EAW57408.1| hypoxia inducible factor 3, alpha subunit, isoform CRA_a [Homo
sapiens]
Length = 450
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 180 MKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 239
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 240 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISQV 275
>gi|338725837|ref|XP_001916400.2| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like 2 [Equus caballus]
Length = 680
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNST-IY-DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F MN +Y D I+GYLP E+LGTS Y+Y+H DD + H+A+
Sbjct: 408 IKVKPTEFITRFTMNGKFVYVDQRTTAILGYLPQELLGTSCYEYFHQDDHSHLTDKHKAV 467
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 468 LQSKEKIFTDSYKFRVKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLV 516
>gi|305682540|dbj|BAJ16354.1| CYCLE [Thermobia domestica]
Length = 644
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A ++G+LP E+LG+S Y+YYH DD+ + H+A +Q E T+ YRF +K +
Sbjct: 354 DQRATLVLGFLPQELLGSSMYEYYHHDDIPHLAESHKAALQSSERVTTQIYRFRSKEGSF 413
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV 107
I LQ+ + + W E+++ + V+
Sbjct: 414 IRLQSEWKSFRNPWTKDVEYLIAKNSVI 441
>gi|47210062|emb|CAF96125.1| unnamed protein product [Tetraodon nigroviridis]
Length = 410
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P +++G S ++++H D D + L+ KG+ ++ YRFL ++W +T+
Sbjct: 256 LVGYKPDDLIGRSAFEFHHALDSDHISRSLRTLLSKGQVSTSRYRFLANHGGFVWAETQA 315
Query: 87 YITYHQWNSKPEFIVC 102
+ Y+ S+PE IVC
Sbjct: 316 TVLYNGKTSQPEAIVC 331
>gi|124487978|gb|ABN12072.1| putative aryl hydrocarbon receptor nuclear translocatorl-like
protein [Maconellicoccus hirsutus]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P E+LG S +D++H +D + + E L KG+ S YRF K ++WI+L+T
Sbjct: 60 LLGYSPSELLGKSCFDFFHPEDQRHMKESFEEVLKMKGQVVSVVYRFRAKNREWIYLRTS 119
Query: 86 FYITYHQWNSKPEFIVCTHRVVS 108
+ + + E+IVCT+ V +
Sbjct: 120 AFAFLNPYTEDIEYIVCTNIVTT 142
>gi|194751957|ref|XP_001958290.1| GF10846 [Drosophila ananassae]
gi|190625572|gb|EDV41096.1| GF10846 [Drosophila ananassae]
Length = 412
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A +IG+LP E+LGTS Y+Y+H +D+ +++ H+ +MQ E T+ YRF K +
Sbjct: 324 DQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSF 383
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRV 106
I LQ+ + + W ++ ++I+ + V
Sbjct: 384 IQLQSEWRAFKNPWTNEIDYIIAKNSV 410
>gi|270008138|gb|EFA04586.1| hypoxia inducible factor 1, alpha subunit [Tribolium castaneum]
Length = 879
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY +++G S YDY+H D D++ + + L KG+ + YRFL K ++W+ T+
Sbjct: 343 VLGYDSEDLVGKSVYDYHHAMDSDAICSAFKCLFSKGQCETNRYRFLAKTGGYVWVLTQA 402
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
+ KP+ +VC + V+S V
Sbjct: 403 TLINDNKTMKPQSVVCVNYVISGV 426
>gi|301775376|ref|XP_002923099.1| PREDICTED: hypoxia-inducible factor 3-alpha-like [Ailuropoda
melanoleuca]
Length = 670
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 250 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 309
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 310 RSGGYLWTQTQATVVSGGRAPQSESIVCVHFLISRV 345
>gi|281353701|gb|EFB29285.1| hypothetical protein PANDA_012188 [Ailuropoda melanoleuca]
Length = 603
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 242 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 301
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 302 RSGGYLWTQTQATVVSGGRAPQSESIVCVHFLISRV 337
>gi|324505222|gb|ADY42249.1| Neuronal PAS domain-containing protein 2 [Ascaris suum]
Length = 653
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQ 83
++GY E++GTSGY+Y H DDL+++ H LMQ+G +R TK QW+W++
Sbjct: 293 LLGYGRLEMMGTSGYEYVHSDDLNTLADSHRILMQRGVHQLEAHRLCTKAGQWLWVK 349
>gi|254934455|gb|ACT87836.1| period [Cyclophora sp. JCR-2009]
Length = 332
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KPV F M N I D + P +GYLP +V YH DDL + +E +++K
Sbjct: 108 KPVPFVMRHDANGRIEYIDPESVPYLGYLPQDVHDKDALQLYHPDDLPYLKQIYENIVKK 167
Query: 63 GE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
G S YR L++ +I L+T + + W+ K EF++ H ++ D Q P
Sbjct: 168 GSVAKSKPYRMLSQNGDYIKLETEWSSFINLWSMKLEFVIGKHHILE--GPANPDVFQTP 225
Query: 122 DS-------EEQSNDTGPGDSNTIKM 140
D+ EE+ N T N I++
Sbjct: 226 DTEKPVKVCEEEKNKTQANRENIIRI 251
>gi|295149355|gb|ACM16807.3| aryl hydrocarbon receptor [Ruditapes philippinarum]
Length = 765
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY E+ SGYD H DDL+ HE L++ G YR+ TK QW+WLQ+
Sbjct: 286 MFGYGDRELASKSGYDLIHPDDLNYFSAAHEELIKTGSAGLIAYRWFTKDFQWVWLQSSC 345
Query: 87 YITYHQWNSKPEF 99
+ Y NSKP+F
Sbjct: 346 KVIYK--NSKPDF 356
>gi|432090566|gb|ELK23982.1| Hypoxia-inducible factor 3-alpha [Myotis davidii]
Length = 523
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 113 MKFTYCDERIADVAGYSPDDLIGCSAYEYIHALDSDAVGRSIHTLLSKGQAVTGRYRFLA 172
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 173 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRV 208
>gi|3859464|gb|AAC72734.1| hypoxia inducible factor three alpha [Mus musculus]
Length = 662
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 342
>gi|251823727|ref|NP_001156422.1| hypoxia-inducible factor 3-alpha isoform 1 [Mus musculus]
Length = 664
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 309 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 344
>gi|170295859|ref|NP_058564.2| hypoxia-inducible factor 3-alpha isoform 2 [Mus musculus]
gi|341940802|sp|Q0VBL6.2|HIF3A_MOUSE RecName: Full=Hypoxia-inducible factor 3-alpha; Short=HIF-3-alpha;
Short=HIF3-alpha; AltName:
Full=Basic-helix-loop-helix-PAS protein MOP7; AltName:
Full=HIF3-alpha-1; AltName: Full=Inhibitory PAS domain
protein; Short=IPAS; AltName: Full=Member of PAS protein
7
Length = 662
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 342
>gi|121581812|dbj|BAF44519.1| hypoxia inducible factor 3 alpha [Mus musculus]
Length = 664
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 309 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 344
>gi|111306675|gb|AAI20588.1| Hypoxia inducible factor 3, alpha subunit [Mus musculus]
Length = 662
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 342
>gi|6650272|gb|AAF21782.1| hypoxia-inducible factor 3 alpha [Mus musculus]
Length = 630
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 247 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLA 306
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E I+C H ++S V
Sbjct: 307 RTGGYLWTQTQATVVSGGRGPQSESIICVHFLISRV 342
>gi|440202765|gb|AGB87189.1| period, partial [Dicentria violascens]
Length = 324
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
K V F + N TI D + P +GYLP ++ T YH DDL+ + +E ++++
Sbjct: 113 KAVPFVLRHAANGTIEYIDPESVPYLGYLPQDLADTDALQLYHPDDLNYLRQVYETIVKE 172
Query: 63 GEGTSCY-YRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVP 121
G C YR +T+ +++ L+T + + W+ K EF++ H ++ D Q P
Sbjct: 173 GGLPRCKPYRMMTQNGEYVKLETEWSSFINPWSRKLEFVIGKHHIIE--GPANPDVFQAP 230
Query: 122 DSEE 125
+SE+
Sbjct: 231 ESEK 234
>gi|345785608|ref|XP_533636.3| PREDICTED: hypoxia-inducible factor 3-alpha [Canis lupus
familiaris]
Length = 639
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y+Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAVTGQYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVN----VL----------RRDNNQV 120
+ ++W QT+ + E IVC H ++S V VL R
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPHSESIVCVHFLISRVEETGVVLSLEQTERHSRRHSQRGT 368
Query: 121 PDSEEQSNDTGPGDS 135
P ++ N PGDS
Sbjct: 369 PSQKDTPN---PGDS 380
>gi|354493745|ref|XP_003509000.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2-like [Cricetulus griseus]
Length = 595
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-SCYYRFLTKGQQW 79
D A I+GYLP E+LGTS Y+Y+H DD ++ H+A++Q E + Y+F K +
Sbjct: 375 DQRATAILGYLPQELLGTSCYEYFHQDDHSNLTVKHKAVLQSKEKILTDSYKFRVKDGSF 434
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+ L+++++ + W + E+IV + +V
Sbjct: 435 VTLKSQWFSFTNPWTKELEYIVSINTLV 462
>gi|431909193|gb|ELK12783.1| Hypoxia-inducible factor 3 alpha [Pteropus alecto]
Length = 678
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y Y H D D+V L+ KG+ + YRFL
Sbjct: 249 MKFTYCDERIAEVAGYSPDDLIGCSAYKYIHALDSDAVGQSIHTLLSKGQAVTGRYRFLA 308
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 309 RSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISLV 344
>gi|358332012|dbj|GAA50744.1| single-minded protein [Clonorchis sinensis]
Length = 838
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I G+ P E++ + Y HV D ++ HE L+ KG+ T+ YYR +TK W+W+Q+
Sbjct: 471 ITGFQPQELIDKTLYQLVHVVDSVALRRAHETLLIKGQVTTPYYRLMTKTGGWVWMQSYA 530
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + ++S
Sbjct: 531 TIVHNSRSSRPNCIVSVNYLLS 552
>gi|327273517|ref|XP_003221527.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Anolis carolinensis]
Length = 602
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNS--TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F M+ D A I+GYLP E+LGTS Y+Y+H DD + H+A+
Sbjct: 327 IKVKPTEFVTRFAMDGKFVFVDQRATAILGYLPQELLGTSCYEYFHQDDHSHLTEKHKAV 386
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + VV
Sbjct: 387 LQSKEKIFTNSYKFKAKDGSFVTLKSQWFSFINPWIKELEYIVSINTVV 435
>gi|256773170|dbj|BAI22508.1| period protein [Bactrocera cucurbitae]
gi|256773172|dbj|BAI22509.1| period protein [Bactrocera cucurbitae]
Length = 1034
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 350 DSAAVSTLGYLPQDLIGRSIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 409
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I L+T + + W+ K EF++ HRV
Sbjct: 410 NGCYILLETEWTSFVNPWSRKLEFVIGHHRV 440
>gi|344269355|ref|XP_003406518.1| PREDICTED: hypoxia-inducible factor 3-alpha [Loxodonta africana]
Length = 670
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D + GY P +++G S Y Y H D D+V L+ KG+ + YRFL
Sbjct: 295 MKFTYCDERIAEVAGYSPEDLIGCSAYKYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLA 354
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+ ++W QT+ + + E IVC H ++S V
Sbjct: 355 RSGGYLWTQTQATVVSGGRAPQSESIVCIHFLISRV 390
>gi|241706697|ref|XP_002413286.1| single-minded, putative [Ixodes scapularis]
gi|215507100|gb|EEC16594.1| single-minded, putative [Ixodes scapularis]
Length = 623
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D P+ GY P +++ + Y Y H D + H L+ KG+ T+ YYRF++K W+
Sbjct: 146 DARVAPLTGYEPQDLIEKTLYHYIHGYDCLHMRYSHHTLLLKGQVTTKYYRFMSKEGGWV 205
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVS 108
W+Q+ I ++ +S+P IV + V+S
Sbjct: 206 WMQSYATIVHNSRSSRPHCIVSVNYVLS 233
>gi|19568850|gb|AAL91938.1|AF480839_1 period protein [Bactrocera neohumeralis]
gi|19568852|gb|AAL91939.1|AF480840_1 period protein [Bactrocera tryoni]
Length = 1035
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 350 DSAAVSTLGYLPQDLIGRSIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 409
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I L+T + + W+ K EF++ HRV
Sbjct: 410 NGCYILLETEWTSFVNPWSRKLEFVIGHHRV 440
>gi|46360170|gb|AAS88904.1| biological clock protein C [Drosophila simulans]
gi|46360252|gb|AAS88945.1| biological clock protein C [Drosophila simulans]
gi|46360254|gb|AAS88946.1| biological clock protein C [Drosophila simulans]
gi|46360256|gb|AAS88947.1| biological clock protein C [Drosophila simulans]
gi|46360258|gb|AAS88948.1| biological clock protein C [Drosophila simulans]
gi|46360260|gb|AAS88949.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKAYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|380039558|gb|AFD32323.1| hypoxia-inducible factor 1 alpha A, partial [Aspius aspius]
Length = 545
Score = 59.3 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D ++G+ P ++L S Y+YYH D + H L KG+ + YR L
Sbjct: 155 MRFTYCDERITKLLGFDPVDLLQHSVYEYYHALDSGHMTKTHHKLFVKGQVCTGQYRLLA 214
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
K ++W +T+ + Y+ NS+P+ +VC + ++S
Sbjct: 215 KEGGFVWAETQATVIYNSKNSQPQCVVCVNYILS 248
>gi|255693991|gb|ACU30154.1| hypoxia inducible factor 1 alpha [Litopenaeus vannamei]
Length = 1050
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 29 GYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFYI 88
GY P E++G S Y+ +H D + V ++ L KG+ + YRFL +G ++WL T+ +
Sbjct: 278 GYGPKELVGRSLYEMHHALDSELVKEAYKTLRSKGQVETGQYRFLARGGGYVWLVTQATL 337
Query: 89 TYHQWNSKPEFIVCTHRVVSYV 110
+ + KP+++VC + VVS V
Sbjct: 338 IHGPKDHKPQYVVCLNYVVSGV 359
>gi|322792391|gb|EFZ16375.1| hypothetical protein SINV_10619 [Solenopsis invicta]
Length = 631
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L++KG+ T+ YYRFLTK W+W+Q+
Sbjct: 204 LTGYDPPDLIEKTLYHYVHGCDIFQLRHAHHVLLRKGQVTTRYYRFLTKSGGWVWMQSYV 263
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V++
Sbjct: 264 TIVHNSRSSRPHCIVSVNYVLT 285
>gi|46360262|gb|AAS88950.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKAYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|195477543|ref|XP_002100238.1| GE16269 [Drosophila yakuba]
gi|194187762|gb|EDX01346.1| GE16269 [Drosophila yakuba]
Length = 534
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 409 DSAAVSALGYLPQDLIGRSIMDFYHQEDLSVMKETYEMVMKKGQTAGASFCSKPYRFLIQ 468
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 469 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 499
>gi|78183101|gb|ABB29546.1| putative period [Drosophila teissieri]
Length = 509
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 376 DSAAVSALGYLPQDLIGRSIMDFYHQEDLSVMKETYEMVMKKGQTAGASFCSKPYRFLIQ 435
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 436 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 466
>gi|552107|gb|AAA28766.1| period protein, partial [Drosophila simulans]
gi|552109|gb|AAA28768.1| period protein, partial [Drosophila simulans]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|256089970|ref|XP_002581006.1| meso-ectoderm gene expression control protein; single-minded
[Schistosoma mansoni]
Length = 673
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I G+ P E++ + Y H D+ S+ HE L+ KG+ T+ YYR L K W+W+Q+
Sbjct: 167 ITGFQPQELVDKTLYQLVHTADVASLRHSHEILLNKGQVTTPYYRLLNKSGGWVWIQSYA 226
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
I ++ +S+P +V + ++S +
Sbjct: 227 TIIHNSRSSRPNCVVSVNYLLSEI 250
>gi|360044432|emb|CCD81980.1| meso-ectoderm gene expression control protein [Schistosoma mansoni]
Length = 672
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
I G+ P E++ + Y H D+ S+ HE L+ KG+ T+ YYR L K W+W+Q+
Sbjct: 166 ITGFQPQELVDKTLYQLVHTADVASLRHSHEILLNKGQVTTPYYRLLNKSGGWVWIQSYA 225
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
I ++ +S+P +V + ++S +
Sbjct: 226 TIIHNSRSSRPNCVVSVNYLLSEI 249
>gi|444519553|gb|ELV12868.1| Aryl hydrocarbon receptor [Tupaia chinensis]
Length = 657
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 18 TIYDLVAPPIIGYLPFEVLGT-SGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKG 76
T D ++GY E+ + SGY + H D+ H +++ GE +R LTKG
Sbjct: 220 TACDAKGKIVLGYTEAELCTSGSGYQFLHAADMLYCAESHIRMIKTGESGMIVFRLLTKG 279
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSY---VNVLRRDNNQVP 121
+W W+Q+ + Y N +P++I+ T R ++ + LR+ N ++P
Sbjct: 280 NRWTWVQSNARLVYK--NGRPDYIIATQRPLTEEEGIEHLRKRNMKLP 325
>gi|158294552|ref|XP_556301.3| AGAP005655-PA [Anopheles gambiae str. PEST]
gi|157015616|gb|EAL39880.3| AGAP005655-PA [Anopheles gambiae str. PEST]
Length = 642
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSC----YYRFLTKG 76
D A ++G+LP E+LGTS Y+YYH +D+ ++ H+A +Q GT C YR TK
Sbjct: 349 DQRATLVLGFLPQELLGTSMYEYYHHEDIPALAESHKAALQ---GTQCVTTSVYRLRTKE 405
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
++ LQ+ + + W + E+++ + V+
Sbjct: 406 TGFVRLQSEWKSFRNPWTKEIEYLIAKNNVI 436
>gi|552121|gb|AAA28780.1| period protein, partial [Drosophila mauritiana]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552124|gb|AAA28783.1| period protein, partial [Drosophila mauritiana]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552120|gb|AAA28779.1| period protein, partial [Drosophila simulans]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552104|gb|AAA28755.1| period protein, partial [Drosophila simulans]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552106|gb|AAA28757.1| period protein, partial [Drosophila simulans]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|1079113|pir||S52941 period protein (clone ME-K1) - fruit fly (Drosophila melanogaster)
(fragment)
gi|552118|gb|AAA28777.1| period protein, partial [Drosophila melanogaster]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 392 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 451
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 452 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 482
>gi|552105|gb|AAA28756.1| period protein, partial [Drosophila simulans]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552119|gb|AAA28778.1| period protein, partial [Drosophila mauritiana]
gi|552122|gb|AAA28781.1| period protein, partial [Drosophila mauritiana]
gi|552125|gb|AAA28784.1| period protein, partial [Drosophila mauritiana]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|552111|gb|AAA28770.1| period protein, partial [Drosophila sechellia]
gi|552113|gb|AAA28772.1| period protein, partial [Drosophila sechellia]
gi|552115|gb|AAA28774.1| period protein, partial [Drosophila sechellia]
Length = 558
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 390 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 449
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 450 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 480
>gi|41019229|sp|Q03355.2|PER_DROSI RecName: Full=Period circadian protein
Length = 656
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|41019226|sp|Q03354.2|PER_DROSE RecName: Full=Period circadian protein
Length = 661
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 390 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 449
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 450 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 480
>gi|552110|gb|AAA28769.1| period protein, partial [Drosophila melanogaster]
gi|552112|gb|AAA28771.1| period protein, partial [Drosophila melanogaster]
gi|552114|gb|AAA28773.1| period protein, partial [Drosophila melanogaster]
gi|552116|gb|AAA28775.1| period protein, partial [Drosophila melanogaster]
gi|552117|gb|AAA28776.1| period protein, partial [Drosophila melanogaster]
Length = 560
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 392 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 451
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 452 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 482
>gi|552108|gb|AAA28767.1| period protein, partial [Drosophila sechellia]
Length = 558
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 390 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 449
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 450 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 480
>gi|552123|gb|AAA28782.1| period protein, partial [Drosophila mauritiana]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|405967670|gb|EKC32806.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Crassostrea gigas]
Length = 698
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKG 76
T D ++GY P ++LG + +D+YH +D + T + L KG+ S YRF
Sbjct: 368 TFVDQRVTAVLGYQPADLLGKTAFDFYHPEDKAHMKDTFDQVLKLKGQVMSIMYRFRASN 427
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
+W+WL+T + + + + E+IVCT+ V
Sbjct: 428 HEWVWLRTSSFSFQNPYTDEVEYIVCTNTSAKSV 461
>gi|41019223|sp|Q03353.2|PER_DROMA RecName: Full=Period circadian protein
Length = 676
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 391 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 450
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 451 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 481
>gi|440202883|gb|AGB87248.1| period, partial [Hemiceras nigrescens]
Length = 338
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 4 FKPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
KPV F + N TI D + P +GYLP ++ YH DDL + +E +++
Sbjct: 112 LKPVPFVLRHAANGTIEYIDPESVPYLGYLPQDLADKDALQLYHPDDLCYLRQVYETIVK 171
Query: 62 KGEGTSCY-YRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
+G C YR +T+ +I L+T + + W+ K EF++ H ++ D Q
Sbjct: 172 EGGLPRCKPYRMITQNGDYIKLETEWSSFINPWSKKLEFVIGKHHIIE--GPRNPDVFQS 229
Query: 121 PDSEEQSNDTGPGDSNTIKM 140
P++ +++ + N I+M
Sbjct: 230 PETVKETVKISEEEKNKIQM 249
>gi|339241187|ref|XP_003376519.1| circadian locomoter output cycles protein kaput [Trichinella
spiralis]
gi|316974760|gb|EFV58236.1| circadian locomoter output cycles protein kaput [Trichinella
spiralis]
Length = 433
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL---------MQKGEGTSCYYRFLTKGQ 77
I GY PFE++G SGYDYYH DDL+ + HE L M E YRF K
Sbjct: 155 ITGYTPFEIVGCSGYDYYHADDLEQISADHETLNSYVFIVVVMHTKEVLMKPYRFQIKCG 214
Query: 78 QWIWLQTRFYITYHQWNSKPEFIVCTHRVVS 108
WI++++R + S ++C VVS
Sbjct: 215 SWIYIESRCTVL-----SSNSSVLCVSLVVS 240
>gi|391325150|ref|XP_003737102.1| PREDICTED: single-minded homolog 1-like [Metaseiulus occidentalis]
Length = 496
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P E++ S Y + HV D + H L+ KG+ T+ YYR L KG ++W+Q+
Sbjct: 257 LTGYEPQELIDKSLYQFVHVSDCMHLRLAHHQLLLKGQVTTKYYRLLCKGGGYVWMQSYA 316
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVN 111
I ++ +S+P +V + V+S ++
Sbjct: 317 TIVHNSRSSRPHCVVSVNYVLSDIH 341
>gi|46360214|gb|AAS88926.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|46360172|gb|AAS88905.1| biological clock protein C [Drosophila simulans]
gi|46360176|gb|AAS88907.1| biological clock protein C [Drosophila simulans]
gi|46360180|gb|AAS88909.1| biological clock protein C [Drosophila simulans]
gi|46360188|gb|AAS88913.1| biological clock protein C [Drosophila simulans]
gi|46360190|gb|AAS88914.1| biological clock protein C [Drosophila simulans]
gi|46360192|gb|AAS88915.1| biological clock protein C [Drosophila simulans]
gi|46360196|gb|AAS88917.1| biological clock protein C [Drosophila simulans]
gi|46360198|gb|AAS88918.1| biological clock protein C [Drosophila simulans]
gi|46360212|gb|AAS88925.1| biological clock protein C [Drosophila simulans]
gi|46360216|gb|AAS88927.1| biological clock protein C [Drosophila simulans]
gi|46360220|gb|AAS88929.1| biological clock protein C [Drosophila simulans]
gi|46360230|gb|AAS88934.1| biological clock protein C [Drosophila simulans]
gi|46360236|gb|AAS88937.1| biological clock protein C [Drosophila simulans]
gi|46360240|gb|AAS88939.1| biological clock protein C [Drosophila simulans]
gi|46360250|gb|AAS88944.1| biological clock protein C [Drosophila simulans]
gi|46360276|gb|AAS88957.1| biological clock protein C [Drosophila simulans]
gi|46360284|gb|AAS88961.1| biological clock protein C [Drosophila simulans]
gi|46360288|gb|AAS88963.1| biological clock protein C [Drosophila simulans]
gi|46360292|gb|AAS88965.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|328708220|ref|XP_003243627.1| PREDICTED: single-minded homolog 2-like isoform 2 [Acyrthosiphon
pisum]
Length = 556
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H +D+ ++ H L+ KG+ T+ YYR L K W+W+Q+
Sbjct: 255 LTGYEPQDLIEKTLYHYIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYA 314
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V+S
Sbjct: 315 TIVHNSRSSRPHCIVSVNYVLS 336
>gi|46360222|gb|AAS88930.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|405978067|gb|EKC42482.1| Single-minded-like protein 1 [Crassostrea gigas]
Length = 701
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L+ KG+ T+ YYRFL K W+W+Q+
Sbjct: 250 LTGYEPQDLIERTLYQYIHACDIVHMKFAHHTLLLKGQVTTKYYRFLAKDGGWVWIQSYA 309
Query: 87 YITYHQWNSKPEFIVCTHRVVSYVNV 112
I ++ +S+P IV + V+S V
Sbjct: 310 TIVHNSRSSRPHCIVSVNYVLSDVEA 335
>gi|328708222|ref|XP_003243628.1| PREDICTED: single-minded homolog 2-like isoform 3 [Acyrthosiphon
pisum]
Length = 593
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H +D+ ++ H L+ KG+ T+ YYR L K W+W+Q+
Sbjct: 292 LTGYEPQDLIEKTLYHYIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYA 351
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V+S
Sbjct: 352 TIVHNSRSSRPHCIVSVNYVLS 373
>gi|254934423|gb|ACT87820.1| period [Aethes promptana]
Length = 331
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KPV F M + N + D + P++GYLP +V G YH DDL + +E ++++
Sbjct: 111 KPVEFVMRHISNGNLEYMDHESVPLLGYLPQDVTGKDVLRLYHPDDLVYMREIYEIIVKE 170
Query: 63 GEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
G S YRF+ + ++ L+T + + W+ K EF++ H V+
Sbjct: 171 GGAPRSKPYRFMAQNGHYVILETEWSSFINPWSRKLEFVIGKHHVI 216
>gi|46369635|gb|AAS89667.1| biological clock protein [Drosophila melanogaster]
Length = 605
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 401 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 460
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 461 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 491
>gi|46360234|gb|AAS88936.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|46360204|gb|AAS88921.1| biological clock protein C [Drosophila simulans]
gi|46360206|gb|AAS88922.1| biological clock protein C [Drosophila simulans]
gi|46360208|gb|AAS88923.1| biological clock protein C [Drosophila simulans]
gi|46360210|gb|AAS88924.1| biological clock protein C [Drosophila simulans]
gi|46360218|gb|AAS88928.1| biological clock protein C [Drosophila simulans]
gi|46360246|gb|AAS88942.1| biological clock protein C [Drosophila simulans]
gi|46360264|gb|AAS88951.1| biological clock protein C [Drosophila simulans]
gi|46360274|gb|AAS88956.1| biological clock protein C [Drosophila simulans]
gi|46360282|gb|AAS88960.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|46360178|gb|AAS88908.1| biological clock protein C [Drosophila simulans]
gi|46360182|gb|AAS88910.1| biological clock protein C [Drosophila simulans]
gi|46360184|gb|AAS88911.1| biological clock protein C [Drosophila simulans]
gi|46360186|gb|AAS88912.1| biological clock protein C [Drosophila simulans]
gi|46360194|gb|AAS88916.1| biological clock protein C [Drosophila simulans]
gi|46360200|gb|AAS88919.1| biological clock protein C [Drosophila simulans]
gi|46360202|gb|AAS88920.1| biological clock protein C [Drosophila simulans]
gi|46360224|gb|AAS88931.1| biological clock protein C [Drosophila simulans]
gi|46360226|gb|AAS88932.1| biological clock protein C [Drosophila simulans]
gi|46360228|gb|AAS88933.1| biological clock protein C [Drosophila simulans]
gi|46360232|gb|AAS88935.1| biological clock protein C [Drosophila simulans]
gi|46360238|gb|AAS88938.1| biological clock protein C [Drosophila simulans]
gi|46360242|gb|AAS88940.1| biological clock protein C [Drosophila simulans]
gi|46360244|gb|AAS88941.1| biological clock protein C [Drosophila simulans]
gi|46360266|gb|AAS88952.1| biological clock protein C [Drosophila simulans]
gi|46360270|gb|AAS88954.1| biological clock protein C [Drosophila simulans]
gi|46360278|gb|AAS88958.1| biological clock protein C [Drosophila simulans]
gi|46360280|gb|AAS88959.1| biological clock protein C [Drosophila simulans]
gi|46360286|gb|AAS88962.1| biological clock protein C [Drosophila simulans]
gi|46360290|gb|AAS88964.1| biological clock protein C [Drosophila simulans]
gi|46360294|gb|AAS88966.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|46360248|gb|AAS88943.1| biological clock protein C [Drosophila simulans]
gi|46360268|gb|AAS88953.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|46360174|gb|AAS88906.1| biological clock protein C [Drosophila simulans]
Length = 604
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 400 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 459
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 460 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 490
>gi|242022671|ref|XP_002431762.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
gi|212517087|gb|EEB19024.1| Hypoxia-inducible factor 1 alpha, putative [Pediculus humanus
corporis]
Length = 368
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRFY 87
+GY P +++G S +D+YH D ++V + L KG+ + YRFL KG +W+ T+
Sbjct: 288 LGYNPEDLIGKSIFDFYHAMDSEAVDRGFKTLFSKGQCETGRYRFLAKGGGCVWVLTQAT 347
Query: 88 ITYHQWNSKPEFIVCTHRVV 107
+ Y KP +VC + V+
Sbjct: 348 VIYDSKGQKPNSVVCVNFVI 367
>gi|344257532|gb|EGW13636.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2
[Cricetulus griseus]
Length = 391
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ +P F N D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 173 IKVRPTEFVTRFATNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTVKHKAV 232
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 233 LQSKEKILTDSYKFRVKDGSFVTLKSQWFSFTNPWTKELEYIVSINTLV 281
>gi|328708224|ref|XP_001944204.2| PREDICTED: single-minded homolog 2-like isoform 1 [Acyrthosiphon
pisum]
Length = 561
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H +D+ ++ H L+ KG+ T+ YYR L K W+W+Q+
Sbjct: 260 LTGYEPQDLIEKTLYHYIHGNDIHNMKLSHHTLLLKGQVTTKYYRLLAKDGGWVWVQSYA 319
Query: 87 YITYHQWNSKPEFIVCTHRVVS 108
I ++ +S+P IV + V+S
Sbjct: 320 TIVHNSRSSRPHCIVSVNYVLS 341
>gi|195133118|ref|XP_002010986.1| period [Drosophila mojavensis]
gi|193906961|gb|EDW05828.1| period [Drosophila mojavensis]
Length = 1112
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 28 IGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE--GTS-CY--YRFLTKGQQWIWL 82
+GYLP +++G S D+YH +DL + +E +M+KG+ G+S C YRFL + +I L
Sbjct: 392 LGYLPQDLIGRSIMDFYHHEDLAIMKDTYEKVMKKGQTAGSSFCSKPYRFLIQNGCYILL 451
Query: 83 QTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPD-SEEQSNDTGPGDSNTI 138
+T + + W+ K EF+V HRV + NV N P SE+ N + +
Sbjct: 452 ETEWTSFVNPWSRKLEFVVGHHRVFQGPKHCNVFEMAPNTKPKISEDAQNRNARIKEDIV 511
Query: 139 KM 140
K+
Sbjct: 512 KL 513
>gi|440202861|gb|AGB87237.1| period, partial [Hedya dimidiana]
Length = 335
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 9 FCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT 66
F M + N + D A P +GYLP +V+G YH +DL V +E ++++G T
Sbjct: 117 FTMRHVANGNLAYMDNEAVPFLGYLPQDVIGQDMLKLYHPEDLAYVGHVYETIVKQGRET 176
Query: 67 -SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
S YR L + Q+I L+T + + W+ K EF++ H V+
Sbjct: 177 RSKPYRLLAQNGQYIKLETEWSSFINPWSRKLEFVIGKHHVI 218
>gi|78100217|gb|ABB20914.1| period [Ceratitis capitata]
Length = 1035
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 351 DSAAVSTLGYLPQDLIGRSIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 410
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I L+T + + W+ K EF++ HRV
Sbjct: 411 NGCYILLETEWTSFVNPWSRKLEFVIGHHRV 441
>gi|449331544|gb|AGE97172.1| hypoxia inducible factor-1alpha [Haliotis diversicolor]
Length = 711
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+IGY ++G S Y+Y+H D + V + L KG+ + YRFL K + W+ T+
Sbjct: 257 LIGYNNDNLIGKSLYNYHHALDSEIVEKAFKDLFAKGQTMTGQYRFLAKNGGYAWVITQG 316
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
I Y+ KP+++VC H V+S +
Sbjct: 317 TIIYNNRTQKPQWVVCVHYVLSAI 340
>gi|344266688|ref|XP_003405412.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Loxodonta africana]
Length = 738
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 VGFKPVTFCMSDLMNSTIY--DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEAL 59
+ KP F +N D A I+GYLP E+LGTS Y+Y+H DD ++ H+A+
Sbjct: 466 IKVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAV 525
Query: 60 MQKGEGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+Q E + Y+F K ++ L+++++ + W + E+IV + +V
Sbjct: 526 LQSKEKIFTDSYKFRVKDGSFVTLKSQWFSFTNPWTKELEYIVSINTLV 574
>gi|3660722|gb|AAC72333.1| period [Rupela albina]
gi|158451869|gb|ABW39295.1| putative period protein [Rupela albina]
Length = 333
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 5 KPVTFCMSDLMNSTIYDLVAP--PIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
KP+ F M N T+ L A P +GYLP +V+G YH DDL+ + +E ++++
Sbjct: 113 KPIPFVMRHAANGTLEYLEAESVPYLGYLPQDVIGKDALMLYHPDDLNYLTQVYETIVKE 172
Query: 63 GEG-TSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
G S +R + +I +Q+ F + W+ K EF++ H ++
Sbjct: 173 GGPLKSKPFRMRAQNGDFIHVQSEFSSFINPWSRKLEFVIGKHLII 218
>gi|187235201|gb|ACD01839.1| period, partial [Neopolyptychus compar]
Length = 315
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 5 KPVTFCMSDLMNSTIYDLVAP---PIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ 61
KPV F M N I + + P P +GYLP +V YH DDLD + +E++++
Sbjct: 99 KPVPFVMRHAANG-ILEYIEPASVPYLGYLPQDVTXKDALQLYHPDDLDYLQQVYESIVK 157
Query: 62 KGE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
+G + YR + + ++ L+T + + W+ + EF++ H+++ D Q
Sbjct: 158 EGAVARTKPYRMMAQNGDYLRLETEWSSFINPWSKRLEFVIGKHQIIE--GPANPDVFQT 215
Query: 121 PDSEEQSNDTGPGDSNTIKM 140
P SEE N I++
Sbjct: 216 PISEEDKMKAQKCRENIIRI 235
>gi|189233619|ref|XP_970422.2| PREDICTED: similar to arylhydrocarbon receptor nuclear translocator
homolog b [Tribolium castaneum]
Length = 661
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P E+LG S ++++H +D + E +++ KG+ S YRF K ++W+WL+T
Sbjct: 372 LLGYSPPELLGKSCFEFFHPEDQTHMKDSFEQVLKLKGQVLSVMYRFRAKNREWVWLRTS 431
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + + E+IVCT+
Sbjct: 432 AFAFLNPYTDDVEYIVCTN 450
>gi|11467953|sp|Q25637.2|PER_PERAM RecName: Full=Period circadian protein
gi|4544340|gb|AAA64677.2| period clock protein homolog [Periplaneta americana]
Length = 893
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 26 PIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT--SCYYRFLTKGQQWIWLQ 83
P +GYLP E+LG S D+YH +DL + ++ +MQ+ S YRF + +I L+
Sbjct: 409 PYLGYLPHEMLGNSVLDFYHPEDLPFLKEVYQIVMQENGAPFRSKPYRFRSHNGGYILLE 468
Query: 84 TRFYITYHQWNSKPEFIVCTHRVV 107
T + + W+ K EF+V HRV+
Sbjct: 469 TEWSSFVNPWSKKLEFVVGQHRVL 492
>gi|348541225|ref|XP_003458087.1| PREDICTED: hypothetical protein LOC100710360 [Oreochromis
niloticus]
Length = 1036
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D+ + GY P +++ + Y + H D+ + H L+ KG+ T+ YYR L+K W+
Sbjct: 246 DMRVAELTGYEPQDLIDKTLYHHVHACDIFHLRYAHHLLLVKGQVTTKYYRLLSKHGGWV 305
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQVPDSEEQSNDTGPGDSNT 137
W+Q+ I ++ +S+P IV + V++ + + ++ SE+QS T G S T
Sbjct: 306 WVQSYATIVHNSRSSRPHCIVSVNYVLTDI-----ERKELQLSEDQSQATKCGVSLT 357
>gi|345481068|ref|XP_001605013.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Nasonia vitripennis]
Length = 690
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D I+GY P E+LG Y+++H +D + E +++ KG+ S YRF K
Sbjct: 354 TFVDQRVGAILGYTPSELLGHPCYEFFHPEDHTHMRESFEQVLKLKGQVLSVMYRFRAKN 413
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTH 104
+ W+WL+T + + + + E+IVCT+
Sbjct: 414 RDWVWLRTSAFSFLNPYTDEVEYIVCTN 441
>gi|270014664|gb|EFA11112.1| hypothetical protein TcasGA2_TC004710 [Tribolium castaneum]
Length = 679
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKGQQWIWLQTR 85
++GY P E+LG S ++++H +D + E +++ KG+ S YRF K ++W+WL+T
Sbjct: 390 LLGYSPPELLGKSCFEFFHPEDQTHMKDSFEQVLKLKGQVLSVMYRFRAKNREWVWLRTS 449
Query: 86 FYITYHQWNSKPEFIVCTH 104
+ + + E+IVCT+
Sbjct: 450 AFAFLNPYTDDVEYIVCTN 468
>gi|209414520|dbj|BAB85488.3| period [Neobellieria bullata]
Length = 1032
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE---GTSCY--YRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ + C YRFL +
Sbjct: 348 DSAAISALGYLPQDLIGRSILDFYHHEDLIVLKEIYETVMKKGQMAGASFCSKPYRFLIQ 407
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQS 127
++ L+T + + W+ K EF++ HRV VNV N P E S
Sbjct: 408 NGCYVLLETEWTSFVNPWSRKLEFVIGHHRVFQGPKNVNVFEPPPNTKPKLSEDS 462
>gi|210136294|gb|ACJ08739.1| period [Neobellieria bullata]
Length = 999
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE---GTSCY--YRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ + C YRFL +
Sbjct: 348 DSAAISALGYLPQDLIGRSILDFYHHEDLIVLKEIYETVMKKGQMAGASFCSKPYRFLIQ 407
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPDSEEQS 127
++ L+T + + W+ K EF++ HRV VNV N P E S
Sbjct: 408 NGCYVLLETEWTSFVNPWSRKLEFVIGHHRVFQGPKNVNVFEPPPNTKPKLSEDS 462
>gi|427794165|gb|JAA62534.1| Putative tango, partial [Rhipicephalus pulchellus]
Length = 700
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 18 TIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQ-KGEGTSCYYRFLTKG 76
T D ++GY P E+LG +D++H +D + E +++ KG+ S YR K
Sbjct: 430 TFVDPRVTAVLGYQPQELLGKPCFDFFHPEDQGHMKENFEQVLKMKGQVMSVMYRLRAKN 489
Query: 77 QQWIWLQTRFYITYHQWNSKPEFIVCTH 104
++WIWL+T + + + + E++VCT+
Sbjct: 490 REWIWLRTSSFAFLNPYTNDVEYVVCTN 517
>gi|189237669|ref|XP_967427.2| PREDICTED: similar to hypoxia-inducible factor 1 alpha [Tribolium
castaneum]
Length = 795
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWI 80
D + ++GY +++G S YDY+H D D++ + + L KG+ + YRFL K ++
Sbjct: 253 DKIMMDVLGYDSEDLVGKSVYDYHHAMDSDAICSAFKCLFSKGQCETNRYRFLAKTGGYV 312
Query: 81 WLQTRFYITYHQWNSKPEFIVCTHRVVSYV 110
W+ T+ + KP+ +VC + V+S V
Sbjct: 313 WVLTQATLINDNKTMKPQSVVCVNYVISGV 342
>gi|83375598|gb|AAC60338.2| aryl hydrocarbon receptor [Petromyzon marinus]
Length = 1076
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 27 IIGYLPFEV-LGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
++GY E+ + +GY + H D+ H +M+ GE +R LTKG +W W+Q
Sbjct: 317 VLGYTELELAMRGTGYQFIHAADMLHCADNHVRMMKTGESGITIFRLLTKGNRWAWVQAN 376
Query: 86 FYITYHQWNSKPEFIVCTHRVVS 108
+ Y N +P++I+ T R +S
Sbjct: 377 ARLVYK--NGRPDYIIATQRPLS 397
>gi|440202611|gb|AGB87112.1| period, partial [Bactra furfurana]
Length = 329
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 6 PVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKG 63
P F M + N + D A P++GYLP ++ G YH +DL V +E ++++G
Sbjct: 109 PTPFVMRHVANGNLEYIDHEAVPLLGYLPQDITGKDVLTLYHPEDLAYVRHVYETIVKQG 168
Query: 64 EGT-SCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
T S YR L + +I L+T + + W+ K EF++ H V+
Sbjct: 169 RTTRSKPYRLLAQNGHYIRLETEWSSFINPWSRKLEFVIGKHHVI 213
>gi|194388242|dbj|BAG65505.1| unnamed protein product [Homo sapiens]
Length = 339
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++G S Y+Y H D D+V L+ KG+ + YRFL + ++W QT+
Sbjct: 205 VAGYSPDDLIGCSAYEYIHALDSDAVSKSIHTLLSKGQAVTGQYRFLARSGGYLWTQTQA 264
Query: 87 YITYHQWNSKPEFIVCTHRVVSY 109
+ + E IVC H ++ +
Sbjct: 265 TVVSGGRGPQSESIVCVHFLIRW 287
>gi|164600783|gb|ABY61822.1| endothelial PAS domain protein 1 [Ovis aries]
Length = 142
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
++GY P E+LG S Y++YH D +++ H+ L KG+ S YR L K ++WL+T+
Sbjct: 72 LVGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQG 131
Query: 87 YITYHQWNSKP 97
+ Y+ N +P
Sbjct: 132 TVIYNPRNLQP 142
>gi|440203015|gb|AGB87314.1| period, partial [Niphopyralis chionesis]
Length = 333
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 5 KPVTFCMSDLMNSTI--YDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQK 62
K V F M N + D + P +GYLP ++LG YH +DL +V+ +E ++++
Sbjct: 112 KVVPFVMRHAANGNLEYIDPESVPYLGYLPQDILGKDILTLYHPEDLCYLVSVYEKIVKE 171
Query: 63 GE-GTSCYYRFLTKGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVV 107
G S YR LT+ +++ L+T + + W+ K EF+ TH VV
Sbjct: 172 GSLAKSKPYRMLTQNGEYLILETEWTSFVNPWSKKLEFVSGTHHVV 217
>gi|443702124|gb|ELU00285.1| hypothetical protein CAPTEDRAFT_165634, partial [Capitella teleta]
Length = 487
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLTKGQQWIWLQTRF 86
+ GY P +++ + Y Y H D+ + H L+ KG+ T+ YYRFL K W+W+Q+
Sbjct: 251 LTGYEPQDLIEKTLYHYIHACDILHMRYSHHMLLLKGQVTTKYYRFLAKDGGWVWVQSYA 310
Query: 87 YITYHQWNSKPEFIVCTHRVVSYV 110
I ++ +S+P IV + V+S V
Sbjct: 311 TIVHNSRSSRPHCIVSVNYVLSDV 334
>gi|38490701|gb|AAR21680.1| period [Drosophila simulans]
gi|38490703|gb|AAR21681.1| period [Drosophila simulans]
gi|38490705|gb|AAR21682.1| period [Drosophila simulans]
gi|38490707|gb|AAR21683.1| period [Drosophila simulans]
gi|38490709|gb|AAR21684.1| period [Drosophila simulans]
gi|38490711|gb|AAR21685.1| period [Drosophila simulans]
gi|38490713|gb|AAR21686.1| period [Drosophila simulans]
gi|38490715|gb|AAR21687.1| period [Drosophila simulans]
gi|38490717|gb|AAR21688.1| period [Drosophila simulans]
gi|38490719|gb|AAR21689.1| period [Drosophila simulans]
gi|38490721|gb|AAR21690.1| period [Drosophila simulans]
gi|38490723|gb|AAR21691.1| period [Drosophila simulans]
gi|38490725|gb|AAR21692.1| period [Drosophila simulans]
gi|38490727|gb|AAR21693.1| period [Drosophila simulans]
gi|38490729|gb|AAR21694.1| period [Drosophila simulans]
gi|38490731|gb|AAR21695.1| period [Drosophila simulans]
gi|38490733|gb|AAR21696.1| period [Drosophila simulans]
gi|38490735|gb|AAR21697.1| period [Drosophila simulans]
gi|38490737|gb|AAR21698.1| period [Drosophila simulans]
gi|38490739|gb|AAR21699.1| period [Drosophila simulans]
gi|38490741|gb|AAR21700.1| period [Drosophila simulans]
gi|38490743|gb|AAR21701.1| period [Drosophila simulans]
gi|38490745|gb|AAR21702.1| period [Drosophila simulans]
gi|38490747|gb|AAR21703.1| period [Drosophila simulans]
gi|38490749|gb|AAR21704.1| period [Drosophila simulans]
gi|38490751|gb|AAR21705.1| period [Drosophila simulans]
gi|38490753|gb|AAR21706.1| period [Drosophila simulans]
gi|38490755|gb|AAR21707.1| period [Drosophila simulans]
gi|38490757|gb|AAR21708.1| period [Drosophila simulans]
gi|38490759|gb|AAR21709.1| period [Drosophila simulans]
gi|38490761|gb|AAR21710.1| period [Drosophila simulans]
gi|38490763|gb|AAR21711.1| period [Drosophila simulans]
gi|38490765|gb|AAR21712.1| period [Drosophila simulans]
gi|38490767|gb|AAR21713.1| period [Drosophila simulans]
gi|38490769|gb|AAR21714.1| period [Drosophila simulans]
gi|38490771|gb|AAR21715.1| period [Drosophila simulans]
gi|38490773|gb|AAR21716.1| period [Drosophila simulans]
gi|38490775|gb|AAR21717.1| period [Drosophila simulans]
gi|38490777|gb|AAR21718.1| period [Drosophila simulans]
gi|38490779|gb|AAR21719.1| period [Drosophila simulans]
gi|38490781|gb|AAR21720.1| period [Drosophila simulans]
gi|38490783|gb|AAR21721.1| period [Drosophila simulans]
gi|38490785|gb|AAR21722.1| period [Drosophila simulans]
gi|38490787|gb|AAR21723.1| period [Drosophila simulans]
gi|38490789|gb|AAR21724.1| period [Drosophila simulans]
gi|38490791|gb|AAR21725.1| period [Drosophila simulans]
gi|38490793|gb|AAR21726.1| period [Drosophila simulans]
gi|38490795|gb|AAR21727.1| period [Drosophila simulans]
gi|38490797|gb|AAR21728.1| period [Drosophila simulans]
gi|38490799|gb|AAR21729.1| period [Drosophila simulans]
gi|38490801|gb|AAR21730.1| period [Drosophila simulans]
gi|38490803|gb|AAR21731.1| period [Drosophila simulans]
gi|38490805|gb|AAR21732.1| period [Drosophila simulans]
gi|38490807|gb|AAR21733.1| period [Drosophila simulans]
gi|38490809|gb|AAR21734.1| period [Drosophila simulans]
gi|38490811|gb|AAR21735.1| period [Drosophila simulans]
gi|38490813|gb|AAR21736.1| period [Drosophila simulans]
gi|38490815|gb|AAR21737.1| period [Drosophila simulans]
gi|38490817|gb|AAR21738.1| period [Drosophila simulans]
gi|38490819|gb|AAR21739.1| period [Drosophila simulans]
gi|38490821|gb|AAR21740.1| period [Drosophila simulans]
gi|38490823|gb|AAR21741.1| period [Drosophila simulans]
gi|38490825|gb|AAR21742.1| period [Drosophila simulans]
gi|38490827|gb|AAR21743.1| period [Drosophila simulans]
gi|38490829|gb|AAR21744.1| period [Drosophila simulans]
gi|38490831|gb|AAR21745.1| period [Drosophila simulans]
gi|38490833|gb|AAR21746.1| period [Drosophila simulans]
gi|38490835|gb|AAR21747.1| period [Drosophila simulans]
gi|38490837|gb|AAR21748.1| period [Drosophila simulans]
gi|38490839|gb|AAR21749.1| period [Drosophila simulans]
gi|38490841|gb|AAR21750.1| period [Drosophila simulans]
gi|38490843|gb|AAR21751.1| period [Drosophila simulans]
gi|38490845|gb|AAR21752.1| period [Drosophila simulans]
gi|38490847|gb|AAR21753.1| period [Drosophila simulans]
gi|38490849|gb|AAR21754.1| period [Drosophila simulans]
gi|38490851|gb|AAR21755.1| period [Drosophila simulans]
gi|38490853|gb|AAR21756.1| period [Drosophila simulans]
gi|38490855|gb|AAR21757.1| period [Drosophila simulans]
gi|38490857|gb|AAR21758.1| period [Drosophila simulans]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 107 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 166
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 167 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 197
>gi|158058|gb|AAA28753.1| biological clock protein C [Drosophila melanogaster]
gi|225488|prf||1304299C protein perC
Length = 1176
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 405 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 464
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 465 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 495
>gi|60593843|pdb|1WA9|A Chain A, Crystal Structure Of The Pas Repeat Region Of The
Drosophila Clock Protein Period
gi|60593844|pdb|1WA9|B Chain B, Crystal Structure Of The Pas Repeat Region Of The
Drosophila Clock Protein Period
Length = 368
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCY-----YRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ YRFL +
Sbjct: 174 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 233
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 234 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 264
>gi|364506025|pdb|3RTY|A Chain A, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506026|pdb|3RTY|B Chain B, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506027|pdb|3RTY|C Chain C, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506028|pdb|3RTY|D Chain D, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506029|pdb|3RTY|E Chain E, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506030|pdb|3RTY|F Chain F, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506031|pdb|3RTY|G Chain G, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
gi|364506032|pdb|3RTY|H Chain H, Structure Of An Enclosed Dimer Formed By The Drosophila
Period Protein
Length = 339
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCY-----YRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ YRFL +
Sbjct: 170 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 229
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 230 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 260
>gi|197313456|dbj|BAG69568.1| hypoxia-inducible factor 1 alpha [Daphnia magna]
Length = 842
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 15 MNSTIYDLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGTSCYYRFLT 74
M T D +GY ++ G S Y +H D +S++ ++ + KG+ + YRFL
Sbjct: 265 MKYTYVDEKIYEFLGYTSEDLEGQSAYQLHHAQDNESILKSYKTMFTKGQIQTPPYRFLA 324
Query: 75 KGQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVSYVNVLRRDNNQV 120
+ + W+QT+ + Y +S+P+ +VC H +S + D +Q+
Sbjct: 325 RHGGYAWVQTQATLVYGNRDSRPQAVVCVHTCLSEI----EDGDQI 366
>gi|195396373|ref|XP_002056806.1| period [Drosophila virilis]
gi|194146573|gb|EDW62292.1| period [Drosophila virilis]
Length = 1092
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGE---GTSCY--YRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +++KG+ T C +RFL +
Sbjct: 387 DTAAVSALGYLPQDLIGRSILDFYHHEDLSDIKDIYEKVVKKGQTVGATFCSKPFRFLIQ 446
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRVVS---YVNVLRRDNNQVPD-SEEQSNDTG 131
+I L+T + + W+ K EF+V HRV +V N P+ E++ N
Sbjct: 447 NGCYILLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQCDVFEMSPNVTPNIPEDEQNRNA 506
Query: 132 PGDSNTIKM 140
+ +KM
Sbjct: 507 CIKEDILKM 515
>gi|6174902|sp|Q24767.1|PER_DROYA RecName: Full=Period circadian protein
gi|9243|emb|CAA43439.1| period [Drosophila yakuba]
Length = 1208
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 409 DSAAVSALGYLPQDLIGRSIMDFYHQEDLSVMKETYEMVMKKGQTAGASFCSKPYRFLIQ 468
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 469 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 499
>gi|85222|pir||A25018 circadian rhythm protein - fruit fly (Drosophila sp.)
gi|8329|emb|CAA27285.1| per protein [Drosophila melanogaster]
gi|224958|prf||1204263A per gene
Length = 1127
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 343 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 402
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 403 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 433
>gi|46558853|gb|AAT00464.1| period [Anastrepha striata]
Length = 394
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 89 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 148
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 149 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 179
>gi|2547046|dbj|BAA22868.1| bHLH-PAS transcription factor [Drosophila melanogaster]
Length = 642
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|21326654|gb|AAL55454.1| PERIOD [Anastrepha suspensa]
Length = 478
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 167 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 226
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 227 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 257
>gi|3261849|emb|CAA19677.1| EG:155E2.4 [Drosophila melanogaster]
Length = 1156
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 343 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 402
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 403 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 433
>gi|45383840|ref|NP_989464.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Gallus gallus]
gi|82244306|sp|Q8QGQ7.1|BMAL2_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Brain and muscle ARNT-like 2;
Short=cBMAL2
gi|19773560|gb|AAL98707.1|AF246958_1 BMAL2 [Gallus gallus]
Length = 622
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-SCYYRFLTKGQQW 79
D A I+GYLP E+LGTS Y+Y H DD + + H+ ++Q E + Y+F K +
Sbjct: 370 DQRATAILGYLPQELLGTSCYEYCHQDDHNHLAEKHKEVLQNKEKVFTNSYKFRAKDGSF 429
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV 107
I L+++++ + W + E+IV + VV
Sbjct: 430 ITLKSQWFSFMNPWTKELEYIVSNNTVV 457
>gi|46558857|gb|AAT00466.1| period [Anastrepha bicolor]
Length = 394
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 89 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 148
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 149 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 179
>gi|195330520|ref|XP_002031951.1| GM26289 [Drosophila sechellia]
gi|194120894|gb|EDW42937.1| GM26289 [Drosophila sechellia]
Length = 634
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|112790730|gb|ABI21880.1| cycle [Lutzomyia longipalpis]
Length = 622
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEG-TSCYYRFLTKGQQW 79
D A I+G+LP E+LGTS Y+YYH +D+ S+ H++ +Q E T+ YR TK +
Sbjct: 326 DQRATLILGFLPQELLGTSMYEYYHHEDIPSLAESHKSALQISERITTPIYRLRTKDGGF 385
Query: 80 IWLQTRFYITYHQWNSKPEFIVCTHRVV 107
+ LQ+ + + W E+++ + V+
Sbjct: 386 VRLQSEWKSFRNPWTKDVEYLIAKNSVI 413
>gi|195499307|ref|XP_002096893.1| GE24803 [Drosophila yakuba]
gi|194182994|gb|EDW96605.1| GE24803 [Drosophila yakuba]
Length = 641
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|2851608|sp|Q03297.2|PER_DROWI RecName: Full=Period circadian protein
gi|1762159|gb|AAB41360.1| period protein [Drosophila willistoni]
Length = 1093
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 317 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKDTYETVMKKGQTAGASFCSKPYRFLIQ 376
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 377 NGCFVLLETEWTSFVNPWSRKLEFVVGHHRV 407
>gi|195348002|ref|XP_002040540.1| period [Drosophila sechellia]
gi|194121968|gb|EDW44011.1| period [Drosophila sechellia]
Length = 1232
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 430 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 489
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 490 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 520
>gi|2688932|gb|AAB88882.1| basic helix-loop-helix PAS protein [Drosophila melanogaster]
gi|5052000|gb|AAD38396.1| hypoxia-inducible factor 1b [Drosophila melanogaster]
Length = 644
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|24645243|ref|NP_731308.1| tango, isoform A [Drosophila melanogaster]
gi|442618130|ref|NP_001262397.1| tango, isoform B [Drosophila melanogaster]
gi|380865479|sp|O15945.3|ARNT_DROME RecName: Full=Aryl hydrocarbon receptor nuclear translocator
homolog; Short=dARNT; AltName: Full=Hypoxia-inducible
factor 1-beta; AltName: Full=Protein tango
gi|7299130|gb|AAF54329.1| tango, isoform A [Drosophila melanogaster]
gi|17862498|gb|AAL39726.1| LD32037p [Drosophila melanogaster]
gi|440217228|gb|AGB95779.1| tango, isoform B [Drosophila melanogaster]
Length = 642
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|3261851|emb|CAA19679.1| EG:155E2.4 [Drosophila melanogaster]
Length = 1116
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 405 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 464
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 465 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 495
>gi|194903468|ref|XP_001980874.1| GG17399 [Drosophila erecta]
gi|190652577|gb|EDV49832.1| GG17399 [Drosophila erecta]
Length = 645
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 27 IIGYLPFEVLGTSGYDYYHVDDLDSVV-TCHEALMQKGEGTSCYYRFLTKGQQWIWLQTR 85
I+GY P E+LG YD++H +D + + + L QKG+ S YR K +++WL+T+
Sbjct: 305 ILGYTPTELLGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQ 364
Query: 86 FYITYHQWNSKPEFIVCTH 104
Y + + + E+IVCT+
Sbjct: 365 AYAFLNPYTDEVEYIVCTN 383
>gi|40647367|gb|AAL55451.2| PERIOD [Anastrepha grandis]
Length = 472
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 167 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 226
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 227 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 257
>gi|40647369|gb|AAL55452.2| PERIOD [Anastrepha fraterculus]
gi|40647373|gb|AAL55455.2| PERIOD [Anastrepha ludens]
Length = 472
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 167 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 226
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 227 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 257
>gi|3261852|emb|CAA19680.1| EG:155E2.4 [Drosophila melanogaster]
Length = 1055
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G S D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 405 DSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQ 464
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
++ L+T + + W+ K EF+V HRV
Sbjct: 465 NGCYVLLETEWTSFVNPWSRKLEFVVGHHRV 495
>gi|46558855|gb|AAT00465.1| period [Anastrepha bezzii]
Length = 394
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 89 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 148
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 149 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 179
>gi|40647375|gb|AAL55456.2| PERIOD [Anastrepha sororcula]
Length = 472
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 167 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 226
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 227 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 257
>gi|40647371|gb|AAL55453.2| PERIOD [Anastrepha obliqua]
Length = 472
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 21 DLVAPPIIGYLPFEVLGTSGYDYYHVDDLDSVVTCHEALMQKGEGT-----SCYYRFLTK 75
D A +GYLP +++G + +D+YH +DL + +E +M+KG+ S YRFL +
Sbjct: 167 DSAAVSTLGYLPQDLIGRTIFDFYHPEDLMVLKEIYETVMKKGQTAGASFCSKPYRFLIQ 226
Query: 76 GQQWIWLQTRFYITYHQWNSKPEFIVCTHRV 106
+I ++T + + W+ K EF++ HRV
Sbjct: 227 NGCYILMETEWTSFVNPWSRKLEFVIGHHRV 257
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,530,975,281
Number of Sequences: 23463169
Number of extensions: 102407579
Number of successful extensions: 182926
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 1151
Number of HSP's that attempted gapping in prelim test: 178796
Number of HSP's gapped (non-prelim): 3627
length of query: 140
length of database: 8,064,228,071
effective HSP length: 104
effective length of query: 36
effective length of database: 9,919,025,791
effective search space: 357084928476
effective search space used: 357084928476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)