RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10826
(175 letters)
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 94.6 bits (234), Expect = 7e-25
Identities = 46/90 (51%), Positives = 57/90 (63%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ EI+ G + A + D ++YK GVYQH GEM GGHA++I+GWGVE+G YWL N
Sbjct: 161 IMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVAN 220
Query: 61 SWGELWGDGGLFKIRRGTDESRIESFQVSA 90
SW WGD G FKI RG D IES V+
Sbjct: 221 SWNTDWGDNGFFKILRGQDHCGIESEVVAG 250
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 85.5 bits (210), Expect = 3e-21
Identities = 30/80 (37%), Positives = 40/80 (50%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
M EI+ G I I A + L Y G+Y H V + GWG+ DG +YW+ N
Sbjct: 174 MMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRN 233
Query: 61 SWGELWGDGGLFKIRRGTDE 80
SWGE WG+ G +I T +
Sbjct: 234 SWGEPWGERGWLRIVTSTYK 253
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 83.6 bits (205), Expect = 2e-20
Identities = 22/90 (24%), Positives = 31/90 (34%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ I+ + + + Q G HAV I+G+ GV YW+ N
Sbjct: 208 LAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRN 267
Query: 61 SWGELWGDGGLFKIRRGTDESRIESFQVSA 90
SW WGD G D IE +
Sbjct: 268 SWDTNWGDNGYGYFAANIDLMMIEEYPYVV 297
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 81.2 bits (199), Expect = 7e-20
Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTV------GEMSGGHAVKIIGWGVE--DG 52
M+LE+ H G + A E + D + YKKG+Y HT HAV ++G+G + G
Sbjct: 130 MKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASG 189
Query: 53 VKYWLCVNSWGELWGDGGLFKIRRGTDESRIESFQVSA 90
+ YW+ NSWG WG+ G F+IRRGTDE IES V+A
Sbjct: 190 MDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAA 227
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 76.9 bits (188), Expect = 2e-18
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKG--VYQHTVGEMSGGHAVKIIGWGVEDGVKYWLC 58
+ + G I AI A + HAV ++G+G V +W
Sbjct: 120 LAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAI 179
Query: 59 VNSWGELWGDGGLFKIRRGTDESRIESFQVSAGRVD 94
NSWG WG+ G + + RG+ + + S+ VD
Sbjct: 180 KNSWGTDWGEKGYYYLHRGSGACGVNT-MASSAVVD 214
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 76.2 bits (186), Expect = 4e-18
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHT---VGEMSGGHAVKIIGWGVEDGVKYWL 57
M + + + A E D ++Y+KG+Y T HAV +G+G E+G+ YW+
Sbjct: 132 MVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWI 191
Query: 58 CVNSWGELWGDGGLFKIRRGTDESRIES 85
NSWG WG G F I RG + + +
Sbjct: 192 VKNSWGPQWGMNGYFLIERGKNMCGLAA 219
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 77.4 bits (189), Expect = 5e-18
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKG--VYQHTVGEMSGGHAVKIIGWGVE----DGVK 54
+ + G I AI+A + ++ K ++ H V ++G+G E D K
Sbjct: 218 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNK 277
Query: 55 YWLCVNSWGELWGDGGLFKIRRGTD 79
YWL NSWGE WG GG K+ +
Sbjct: 278 YWLVKNSWGEEWGMGGYVKMAKDRR 302
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 75.1 bits (183), Expect = 9e-18
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ + A++A D + HAV I+G+G E G+ YW+ N
Sbjct: 123 ALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKN 182
Query: 61 SWGELWGDGGLFKIRRGTD 79
SW WG+ G +I R
Sbjct: 183 SWDTTWGEEGYMRILRNVG 201
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 73.1 bits (178), Expect = 6e-17
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 1 MQLEIFHFGSIVAAIEA-HQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCV 59
L + +EA + +YK GV+ HAV +G+G DG Y +
Sbjct: 120 SFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPC-GTKLDHAVTAVGYGTSDGKNYIIIK 178
Query: 60 NSWGELWGDGGLFKIRRGTDES 81
NSWG WG+ G +++R + S
Sbjct: 179 NSWGPNWGEKGYMRLKRQSGNS 200
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 71.2 bits (173), Expect = 3e-16
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ + G + A++A + G + H V ++G+ V YW+ N
Sbjct: 125 IAAWLAVNGPVAVAVDASSWMTYT--GGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKN 182
Query: 61 SWGELWGDGGLFKIRRGTDESRIESFQVSAGRV 93
SW WG+ G +I +G+++ ++ + S+ V
Sbjct: 183 SWTTQWGEEGYIRIAKGSNQCLVKE-EASSAVV 214
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 70.4 bits (171), Expect = 6e-16
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVE-DGVKYWLCV 59
+ + + VA D Y +GV+ + H V I+G+G DG KYW
Sbjct: 124 LLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSC-GTELDHGVAIVGYGTTIDGTKYWTVK 182
Query: 60 NSWGELWGDGGLFKIRRGTDE 80
NSWG WG+ G ++ RG +
Sbjct: 183 NSWGPEWGEKGYIRMERGISD 203
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 70.4 bits (171), Expect = 6e-16
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 1 MQLEIFHFGSIVAAIEA-HQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCV 59
++ + + G + ++A H +Y+ GVY + H V ++G+G +G +YWL
Sbjct: 124 LKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVK 183
Query: 60 NSWGELWGDGGLFKIRRGTD 79
NSWG +G+ G ++ R
Sbjct: 184 NSWGHNFGEEGYIRMARNKG 203
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 69.6 bits (169), Expect = 1e-15
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ I V + +YK G+++ HAV +G+G G Y L N
Sbjct: 121 LLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPC-GTKVDHAVTAVGYGKSGGKGYILIKN 179
Query: 61 SWGELWGDGGLFKIRRGTDES 81
SWG WG+ G +I+R S
Sbjct: 180 SWGTAWGEKGYIRIKRAPGNS 200
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 68.9 bits (167), Expect = 2e-15
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 1 MQLEIFHFGSIVAAIEAHQ-DLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCV 59
+ + ++A D +Y+ G++ + HA+ ++G+G E+ +W+
Sbjct: 120 SLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNIS-ANHALTVVGYGTENDKDFWIVK 178
Query: 60 NSWGELWGDGGLFKIRRGTDE 80
NSWG+ WG+ G + R +
Sbjct: 179 NSWGKNWGESGYIRAERNIEN 199
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 68.0 bits (165), Expect = 6e-15
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGV------- 53
++ + G I ++ D YK+G++ G+ HAV ++G+G+++ V
Sbjct: 136 LKEALRFLGPISISVAVSDDFAFYKEGIFDGECGD-QLNHAVMLVGFGMKEIVNPLTKKG 194
Query: 54 ---KYWLCVNSWGELWGDGGLFKIRRGTD 79
Y++ NSWG+ WG+ G I
Sbjct: 195 EKHYYYIIKNSWGQQWGERGFINIETDES 223
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 66.2 bits (160), Expect = 2e-14
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKG--VYQHTVGEMSGGHAVKIIGWGVEDGVKYWLC 58
++ + G + AI+A + Y + + HAV +G+G++ G K+W+
Sbjct: 121 LKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWII 180
Query: 59 VNSWGELWGDGGLFKIRRGTD 79
NSWGE WG+ G + R +
Sbjct: 181 KNSWGENWGNKGYILMARNKN 201
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 65.0 bits (157), Expect = 6e-14
Identities = 19/81 (23%), Positives = 30/81 (37%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
+ +EA + + H V I+G+G + G YW+ N
Sbjct: 119 ALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRN 178
Query: 61 SWGELWGDGGLFKIRRGTDES 81
SWG+ WG+ G + R S
Sbjct: 179 SWGQNWGNQGYIWMERNVASS 199
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 61.6 bits (148), Expect = 1e-12
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 5 IFHFGSIVAAIEAHQDLIIYKKGV-YQHTVGEMSGGHAVKIIGWGVE----DGVKYWLCV 59
VA H YK G+ ++ + H V ++G+G E D KYWL
Sbjct: 128 ATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVK 187
Query: 60 NSWGELWGDGGLFKIRRGTD 79
NSWG WG G KI + +
Sbjct: 188 NSWGPEWGSNGYVKIAKDKN 207
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 60.8 bits (146), Expect = 2e-12
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 1 MQLEIFHFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVN 60
L + +EA +G HAV +G+G Y L N
Sbjct: 120 ALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN----YILIKN 175
Query: 61 SWGELWGDGGLFKIRRGTDES 81
SWG WG+ G +I+RGT S
Sbjct: 176 SWGTGWGENGYIRIKRGTGNS 196
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 56.9 bits (136), Expect = 5e-11
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 7 HFGSIVAAIEAHQDLIIYKKGVYQHTVGEMSGGHAVKIIGWGVEDGVKYWLCVNSWGELW 66
S VA + Y G++ H V I+G+ YW+ NSWG W
Sbjct: 125 VQPSTVAIDASSAQFQQYSSGIFSGPC-GTKLNHGVTIVGYQAN----YWIVRNSWGRYW 179
Query: 67 GDGGLFKIRRG 77
G+ G ++ R
Sbjct: 180 GEKGYIRMLRV 190
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 34.9 bits (80), Expect = 0.003
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 34 GEMSGGHAVKIIGWGVED---GVKYWLCVNSWGELWGDGGLFKI 74
E HA+ I G V++ + NSWG+ G GL+ +
Sbjct: 368 HESLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 33.7 bits (77), Expect = 0.007
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Query: 30 QHTVGEMSGGHAVKIIGWGVEDG----VKYWLCVNSWGELWGDGGLF 72
+ T GE HA+ +D W NSWGE G G
Sbjct: 361 RLTFGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYL 407
>d2gtia1 c.66.1.48 (A:1-194) Nsp15 {Murine hepatitis virus, MHV
[TaxId: 11138]}
Length = 194
Score = 28.6 bits (64), Expect = 0.28
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 148 IPTTSNLNGVVVSTVDSEPGGWWF 171
P ++LNGVVV V +WF
Sbjct: 150 GPQRADLNGVVVEKVGDSDVEFWF 173
>d1r9wa_ d.89.1.2 (A:) Replication initiation protein E1 {Human
papillomavirus type 18 [TaxId: 333761]}
Length = 145
Score = 25.8 bits (57), Expect = 2.0
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 5/37 (13%)
Query: 109 DTTIESSSDTKRAFC-----RCVLDNTGPCLLYLLRF 140
T E + F +C+ G +L LLR+
Sbjct: 43 PTIAEGFKTLIQPFILYAHIQCLDCKWGVLILALLRY 79
>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1
GatZ {Escherichia coli [TaxId: 562]}
Length = 420
Score = 25.6 bits (56), Expect = 3.4
Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 15/91 (16%)
Query: 94 DRDRSSDLEEFEYDTDTTIES-SSD--TKRAFCRCVLD-----NTGPCL-------LYLL 138
+ L ++ +T E+ S+D T+ A+ V D GP L ++ L
Sbjct: 236 QPQEAQALAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFAL 295
Query: 139 RFMNKIILIIPTTSNLNGVVVSTVDSEPGGW 169
+ + ++ S V+ + EP W
Sbjct: 296 AQIEQELIAPENRSGCLAVIEEVMLDEPQYW 326
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 24.1 bits (52), Expect = 6.9
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 93 VDRDRSSDLEEFEYDTDTTIESSSDTKRAFCRCVLDNTG 131
V + S + ++F S++D K+ F D +G
Sbjct: 18 VKAEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASG 56
>d1f08a_ d.89.1.2 (A:) Replication initiation protein E1 {Bovine
papillomavirus [TaxId: 10571]}
Length = 148
Score = 23.9 bits (52), Expect = 8.9
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 109 DTTIESSSDTKRAFC-----RCVLDNTGPCLLYLLRF 140
+ E+S + + C + G C +YL+ F
Sbjct: 46 EVFFEASFELLKKQCSFLQMQKRSHEGGTCAVYLICF 82
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone
decarboxylase, CMD {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 119
Score = 23.7 bits (51), Expect = 9.8
Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 24 YKKGVYQHTVGEMSGGHAVKIIGWGVED---GVKYWLCVNSWGELWGDGGL 71
Y++G + M+ I +ED + ++ ++G+++ G L
Sbjct: 4 YRRG--MEILNRMNRKSYTAIRD-ELEDVAPDLARFVAEFAYGDVYSRGVL 51
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.435
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 689,811
Number of extensions: 30327
Number of successful extensions: 106
Number of sequences better than 10.0: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 35
Length of query: 175
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 96
Effective length of database: 1,322,926
Effective search space: 127000896
Effective search space used: 127000896
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.8 bits)