BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1083
(173 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 213 bits (541), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 126/169 (74%)
Query: 3 MPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQIS 62
+P FL ++FQRVD+D+SG+IS NELQ ALSNGTW PFN TVR +I MFD+ N ++
Sbjct: 22 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
F +F +WKY+TDWQ+ F+++D+DNSG IDK ELK AL FGYRL D DIL++KFD
Sbjct: 82 FSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQ 141
Query: 123 GKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
G+G I FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 142 GRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 190
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 213 bits (541), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 126/170 (74%)
Query: 2 AMPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQI 61
A+P FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N +
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 62 SFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
+F +F +WKY+TDWQ+ F+++D+DNSG IDK ELK AL FGYRL D DIL++KFD
Sbjct: 62 NFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDR 121
Query: 122 HGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
G+G I FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 122 QGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 125/170 (73%)
Query: 2 AMPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQI 61
A+P FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N +
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 62 SFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
+F +F +WKY+TDWQ+ F+++D+DNSG IDK ELK AL GYRL D DIL++KFD
Sbjct: 62 NFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDR 121
Query: 122 HGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
G+G I FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 122 QGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 171
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 123/164 (75%)
Query: 8 FLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFG 67
FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N ++F +F
Sbjct: 26 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 85
Query: 68 ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTI 127
+WKY+TDWQ+ F+++D+DNSG IDK ELK AL FGYRL D DIL++KFD G+G I
Sbjct: 86 GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQI 145
Query: 128 LFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 146 AFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 189
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 207 bits (526), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 123/164 (75%)
Query: 8 FLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFG 67
FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N ++F +F
Sbjct: 5 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 64
Query: 68 ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTI 127
+WKY+TDWQ+ F+++D+DNSG IDK ELK AL FGYRL D DIL++KFD G+G I
Sbjct: 65 GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQI 124
Query: 128 LFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 125 AFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 168
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 123/164 (75%)
Query: 8 FLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFG 67
FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N ++F +F
Sbjct: 4 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 63
Query: 68 ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTI 127
+WKY+TDWQ+ F+++D+DNSG IDK ELK AL FGYRL D DIL++KFD G+G I
Sbjct: 64 GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQI 123
Query: 128 LFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 124 AFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 167
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 122/164 (74%), Gaps = 2/164 (1%)
Query: 8 FLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFG 67
FL ++FQRVD+D+SG+IS ELQ ALSNGTW PFN TVR +I MFD+ N ++F +F
Sbjct: 5 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT 64
Query: 68 ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTI 127
+WKY+TDWQ+ F+++D+DNSG IDK ELK AL GYRL D DIL++KFD G+G I
Sbjct: 65 GVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQI 122
Query: 128 LFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
FDDFI C++L LT F ++D D+DG + + YEQ+LSMVFS+
Sbjct: 123 AFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSI 166
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 129 bits (324), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 20 KSGLISTNELQMALSN----GTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTD 75
+ G I +ELQ L+ G +KPFN ET RLM+ M D++ +G + F +F LW +
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 76 WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
W+ F SFD D SG +D EL+ AL T G+RL V+ + K++ +GK I FDD+I C
Sbjct: 105 WRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIAC 162
Query: 136 CVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
CV L LT SF + D + GVV Y+ F+ V S+
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV 198
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
R F D D+SG + ELQ AL+ ++ + + V + + N G+I+F+D+ A
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFR-LSPQAVNSIAKRYSTN--GKITFDDYIAC 162
Query: 70 WKYVTDWQSCFKSFDKDNSGNID 92
+ F+ D G ++
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVN 185
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 20 KSGLISTNELQMALSN----GTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTD 75
+ G I +ELQ L+ G +KPFN ET RLM+ M D++ +G + F +F LW +
Sbjct: 14 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 73
Query: 76 WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
W+ F SFD D SG +D EL+ AL T G+RL TV+ + K++ GK I FDD+I C
Sbjct: 74 WRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGK--ITFDDYIAC 131
Query: 136 CVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
CV L LT SF + D + G+V Y+ F+ V ++
Sbjct: 132 CVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVMTV 167
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
R F D D+SG + ELQ AL+ ++ N +TV + + + +G+I+F+D+ A
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFR-LNPQTVNSIAKRY--STSGKITFDDYIAC 131
Query: 70 WKYVTDWQSCFKSFDKDNSGNID 92
+ F+ D G ++
Sbjct: 132 CVKLRALTDSFRRRDSAQQGMVN 154
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 20 KSGLISTNELQMALSN----GTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTD 75
+ G I +ELQ L+ G +KPFN ET RLM+ M D++ +G + F +F LW +
Sbjct: 45 QDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNG 104
Query: 76 WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
W+ F S D D SG +D EL+ AL T G+RL V+ + K++ +GK I FDD+I C
Sbjct: 105 WRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDYIAC 162
Query: 136 CVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
CV L LT SF + D + GVV Y+ F+ V S+
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMSV 198
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
R F +D D+SG + ELQ AL+ ++ + + V + + N G+I+F+D+ A
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFR-LSPQAVNSIAKRYSTN--GKITFDDYIAC 162
Query: 70 WKYVTDWQSCFKSFDKDNSGNID 92
+ F+ D G ++
Sbjct: 163 CVKLRALTDSFRRRDTAQQGVVN 185
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 20 KSGLISTNELQMALS----NGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTD 75
+ G + ELQ L+ NGT+ PF+ ET R+MI M D+++TG++ F F LW +
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 76 WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
W+ F + D+D SG ++ EL+ A+G GYRL T+ ++K++ +G+ I FDD++ C
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVAC 129
Query: 136 CVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
CV L LT F + D + G Y+ FL ++
Sbjct: 130 CVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI 165
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 20 KSGLISTNELQMALS----NGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTD 75
+ G + ELQ L+ NGT+ PF+ ET R+MI M D+++TG++ F F LW +
Sbjct: 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71
Query: 76 WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
W+ F + D+D SG ++ EL+ A+G GYRL T+ ++K++ +G+ I FDD++ C
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFDDYVAC 129
Query: 136 CVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
CV L LT F + D + G Y+ FL ++
Sbjct: 130 CVKLRALTDFFKKRDHLQQGSADFIYDDFLQGTMAI 165
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 91/159 (57%), Gaps = 1/159 (0%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKY 72
F+ VD D SG IS EL ALS+ PF+ T ++ M+DKN++G+I+F++F L +
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGV-PFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF 91
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + F+ D G +D E++ AL + GY++ + T LM+KFD +G++ FDD+
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 133 IHCCVMLNLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
+ + + + F+ +D ++ G VT ++ F+ S+
Sbjct: 152 VELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVSI 190
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ+ +K FD D SG I EL A
Sbjct: 44 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAF 103
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L ++ ++++++ G G + FD+FI C V L+ + +F D+D G + ++
Sbjct: 104 EAAGFHLNEHLYSMIIRRYSDEG-GNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN 162
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 163 IQEWLQLT 170
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ+ +K FD D SG I EL A
Sbjct: 55 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAF 114
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L ++ +++++++ G + FD+FI C V L+ + +F D+D G + ++
Sbjct: 115 EAAGFHLNEHLYNMIIRRYSDES-GNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN 173
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 174 IQEWLQLT 181
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I+++ D D+SG I ++EL A + N ++I + + +G + F++F +
Sbjct: 93 IYKQFDTDRSGTICSSELPGAFEAAGFH-LNEHLYNMIIRRY-SDESGNMDFDNFISCLV 150
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ FKS DKD +G I
Sbjct: 151 RLDAMFRAFKSLDKDGTGQI 170
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ +K FD D SG I EL A
Sbjct: 44 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 103
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L + ++++++ G + FD+FI C V L+ + +F D++ G + ++
Sbjct: 104 EAAGFHLNQHIYSMIIRRYSDE-TGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVN 162
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 163 IQEWLQLT 170
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I++R D D+SG I +NEL A + N ++I + + TG + F++F +
Sbjct: 82 IYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRY-SDETGNMDFDNFISCLV 139
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ F+S DK+ +G I
Sbjct: 140 RLDAMFRAFRSLDKNGTGQI 159
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ +K FD D SG I EL A
Sbjct: 55 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 114
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L + ++++++ G + FD+FI C V L+ + +F D++ G + ++
Sbjct: 115 EAAGFHLNQHIYSMIIRRYSDE-TGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVN 173
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 174 IQEWLQLT 181
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I++R D D+SG I +NEL A + N ++I + + TG + F++F +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRY-SDETGNMDFDNFISCLV 150
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ F+S DK+ +G I
Sbjct: 151 RLDAMFRAFRSLDKNGTGQI 170
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ +K FD D SG I EL A
Sbjct: 55 FGIDTSRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 114
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L + ++++++ G + FD+FI C V L+ + +F D++ G + ++
Sbjct: 115 EAAGFHLNQHIYSMIIRRYSDE-TGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVN 173
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 174 IQEWLQLT 181
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I++R D D+SG I +NEL A + N ++I + + TG + F++F +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRY-SDETGNMDFDNFISCLV 150
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ F+S DK+ +G I
Sbjct: 151 RLDAMFRAFRSLDKNGTGQI 170
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ +K F+ D SG I EL A
Sbjct: 771 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF 830
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G+ L + ++++++ G + FD+FI C V L+ + +F D++ G + ++
Sbjct: 831 EAAGFHLNQHIYSMIIRRYSDE-TGNMDFDNFISCLVRLDAMFRAFRSLDKNGTGQIQVN 889
Query: 161 YEQFLSMV 168
+++L +
Sbjct: 890 IQEWLQLT 897
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 24 ISTNELQMALSNGTWK-------PFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDW 76
IS ELQ L+ K F+ E+ R M+ + D++ G++ +F LW + ++
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNY 609
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
+ F+ FD D SG++ E++ A+ G++L +++ +F + I FD+F+ C
Sbjct: 610 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARF-ADDELIIDFDNFVRCL 668
Query: 137 VMLNLLTTSFSQHDEDKDGVVTLHYEQFLS 166
V L +L F Q D + G + L +LS
Sbjct: 669 VRLEILFKIFKQLDPENTGTIQLDLISWLS 698
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I++R + D+SG I +NEL A + N ++I + + TG + F++F +
Sbjct: 809 IYKRFETDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRY-SDETGNMDFDNFISCLV 866
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ F+S DK+ +G I
Sbjct: 867 RLDAMFRAFRSLDKNGTGQI 886
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
IF++ D DKSG +S E++MA+ +K + ++++ F ++ I F++F
Sbjct: 612 IFRKFDLDKSGSMSAYEMRMAIEAAGFK-LPCQLHQVIVARF-ADDELIIDFDNFVRCLV 669
Query: 72 YVTDWQSCFKSFDKDNSGNI 91
+ FK D +N+G I
Sbjct: 670 RLEILFKIFKQLDPENTGTI 689
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F +T R M+ + D + TG++ FE+F LW + WQ +K FD D SG I EL A
Sbjct: 51 FGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAF 110
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHD 150
G+ L + ++++++ G + FD+FI C V L+ + +F D
Sbjct: 111 EAAGFHLNQHIYSMIIRRYSDE-TGNMDFDNFISCLVRLDAMFRAFRSLD 159
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I++R D D+SG I +NEL A + N ++I + + TG + F++F +
Sbjct: 89 IYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRY-SDETGNMDFDNFISCLV 146
Query: 72 YVTDWQSCFKSFD 84
+ F+S D
Sbjct: 147 RLDAMFRAFRSLD 159
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F+ ET ++M+ M D++ +G++ ++F LW + +Q ++ D D SG ++ E++ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G++L +++ +F + I FD+F+ C V L +L F Q D + G + L
Sbjct: 632 EEAGFKLPCQLHQVIVARFADD-ELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLD 690
Query: 161 YEQFLS 166
+LS
Sbjct: 691 LISWLS 696
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F+ ET ++M+ M D++ +G++ ++F LW + +Q ++ D D SG ++ E++ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G++L +++ +F + I FD+F+ C V L +L F Q D + G + L
Sbjct: 632 EEAGFKLPCQLHQVIVARFADD-ELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLD 690
Query: 161 YEQFLS 166
+LS
Sbjct: 691 LISWLS 696
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F+ ET ++M+ M D++ +G++ ++F LW + +Q ++ D D SG ++ E++ AL
Sbjct: 572 FSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 631
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLH 160
G++L +++ +F + I FD+F+ C V L +L F Q D + G + L
Sbjct: 632 EEAGFKLPCQLHQVIVARFADD-ELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLD 690
Query: 161 YEQFLS 166
+LS
Sbjct: 691 LISWLS 696
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
F+ ET ++M+ M D + +G++ ++F LW + +Q ++ D D SG ++ E++ AL
Sbjct: 571 FSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKAL 630
Query: 101 GTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTL 159
G+++ +++ +F + I FD+F+ C V L L F Q D + G + L
Sbjct: 631 EEAGFKMPCQLHQVIVARF-ADDQLIIDFDNFVRCLVRLETLFKIFKQLDPENTGTIEL 688
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE +R M+ D++ G + F +F G
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAE-LRDMMSEIDRDGNGTVDFPEFLGM 71
Query: 69 LWKYVTDW------QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D + F+ FDKD +G + EL+ + G +L D VD +++ D
Sbjct: 72 MARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTD 131
Query: 123 GKGTILFDDFIHCCV 137
G G + +++F+ V
Sbjct: 132 GDGQVNYEEFVRVLV 146
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ VT+++ F FDKD G I EL T + + G + + +M + D G GT+ F
Sbjct: 7 EQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFP 66
Query: 131 DFI 133
+F+
Sbjct: 67 EFL 69
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +L
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLSL 71
Query: 70 WKYVTDWQ-------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
Q FK FD+D +G I EL+ + G +L D+ VD ++++ D
Sbjct: 72 MARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID 131
Query: 123 GKGTILFDDFIHCCV 137
G G I +++F+ V
Sbjct: 132 GDGHINYEEFVRMMV 146
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L + F+ DRD +GLIS EL+ ++N K + E V MI D + G I++E+F
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-VDEMIREADIDGDGHINYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +L
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLSL 71
Query: 70 WKYVTDWQ-------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
Q FK FD+D +G I EL+ + G +L D+ VD ++++ D
Sbjct: 72 MARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID 131
Query: 123 GKGTILFDDFIHCCV 137
G G I +++F+ V
Sbjct: 132 GDGHINYEEFVRMMV 146
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L + F+ DRD +GLIS EL+ ++N K + E V MI D + G I++E+F
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-VDEMIREADIDGDGHINYEEF 141
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF--- 66
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 372
Query: 67 GALWKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A W TD + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 373 MARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 433 GDGQVNYEEFVQ 444
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNL 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 123 GKGTILFDDFIHC 135
G G I +D+F+
Sbjct: 133 GDGQINYDEFVKV 145
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
+D F + D++ +G I+T EL + P AE ++ +I + NN GQ++F +F G
Sbjct: 13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAE-LQDLIAEAENNNNGQLNFTEFCGI 71
Query: 69 LWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ K + + + FK FD+D G I EL+ + G ++ D +D ++++ D
Sbjct: 72 MAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFD 131
Query: 123 GKGTILFDDFI 133
G G I +++F+
Sbjct: 132 GDGMINYEEFV 142
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDK+ +G I EL T + T G + + L+ + +++ G + F
Sbjct: 7 EQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFT 66
Query: 131 DFIHCCVMLNL---------LTTSFSQHDEDKDGVVT 158
+F C +M + +F D D DG ++
Sbjct: 67 EF--CGIMAKQMRETDTEEEMREAFKIFDRDGDGFIS 101
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 372
Query: 70 W----KYV---TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
KY + + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 373 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 433 GDGQVNYEEFVQ 444
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTM 371
Query: 70 W----KYV---TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
KY + + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 372 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 432 GDGQVNYEEFVQ 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTM 371
Query: 70 W----KYV---TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
KY + + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 372 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 432 GDGQVNYEEFVQ 443
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTM 372
Query: 70 W----KYV---TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
KY + + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 373 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 433 GDGQVNYEEFVQ 444
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNL 68
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 69 MARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 128
Query: 123 GKGTILFDDFIHCCV 137
G G + +++F+ +
Sbjct: 129 GDGQVNYEEFVQVMM 143
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNL 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 123 GKGTILFDDFIHCCV 137
G G + +++F+ +
Sbjct: 132 GDGQVNYEEFVQVMM 146
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNL 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 123 GKGTILFDDFIHC 135
G G I +++F+
Sbjct: 133 GDGQINYEEFVKV 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 75
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 76 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 135
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 136 GDGQVNYEEFVQ 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 69
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 130 GDGQVNYEEFVQ 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLNL 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 123 GKGTILFDDFIHCCV 137
G G + +++F+ +
Sbjct: 132 GDGQVNYEEFVQVMM 146
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 69
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 130 GDGQVNYEEFVQ 141
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 69
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 130 GDGQVNYEEFVQ 141
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 73
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 74 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 133
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 134 GDGQVNYEEFVQ 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 68
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 69 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 128
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 129 GDGQVNYEEFVQ 140
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 70
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 71 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 130
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 131 GDGQVNYEEFVQ 142
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 67
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 68 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 127
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 128 GDGQVNYEEFVQ 139
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+ EL + + P E ++ MI D + G I F++F +L
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNP-TEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 70 W-KYVTD------WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
K V D + FK FDKD +G I EL+ + G +L D V+ ++K+ D
Sbjct: 72 MAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 131
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 132 GDGQVNYEEFV 142
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + D++ F FDKD G I EL T + + + + ++ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 131 DFIHCCV-------MLNLLTTSFSQHDEDKDGVVT 158
+F+ L +F D+D++G ++
Sbjct: 67 EFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYIS 101
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 77
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 78 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 137
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 138 GDGQVNYEEFVQ 149
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 338
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 399 GDGQVNYEEFVQ 410
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 338
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 399 GDGQVNYEEFVQ 410
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 372
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 433 GDGQVNYEEFVQ 444
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 335
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 336 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 395
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 396 GDGQVNYEEFVQ 407
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 372
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 433 GDGQVNYEEFVQ 444
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 373
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 374 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 433
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 434 GDGQVNYEEFVQ 445
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 70 WKY-----VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGK 124
+ + F+ FDKD +G I EL+ + G +L D VD ++++ D G
Sbjct: 72 MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 131
Query: 125 GTILFDDFI 133
G + +++F+
Sbjct: 132 GQVNYEEFV 140
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKY 72
F VDRD+SG + NEL M G + + +T M+ +FD + G ISF +F A++K+
Sbjct: 57 FMGVDRDRSGTLEINELMMGQFPGGIR-LSPQTALRMMRIFDTDFNGHISFYEFMAMYKF 115
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKF 119
+ + F D++ SG ++ E+ AL G+ + T +L + F
Sbjct: 116 MELAYNLFVMNDRNRSGTLEPHEILPALQQLGFYINQRTSLLLHRLF 162
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 133 GDGQVNYEEFV 143
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 133 GDGQVNYEEFV 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 132 GDGQVNYEEFV 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 132 GDGQVNYEEFV 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLTM 371
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 372 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 432 GDGQVNYEEFVQ 443
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 72
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDID 132
Query: 123 GKGTILFDDFI 133
G G + +++F+
Sbjct: 133 GDGQVNYEEFV 143
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 67
Query: 69 LWKYVTDWQS-----CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHG 123
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ + G
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 127
Query: 124 KGTILFDDFIH 134
G + +++F+
Sbjct: 128 DGQVNYEEFVQ 138
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTM 71
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ FDKD +G I EL+ + G +L D VD ++++ +
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D G I+T EL + + P AE ++ MI D + G I F +F +
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLIM 363
Query: 70 WKYV-------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + F+ FDKD +G I EL+ + G +L D VD ++++ D
Sbjct: 364 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 423
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 424 GDGQVNYEEFVQ 435
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKY 72
F VDRD+SG + NEL M G + + +T M+ +FD + G ISF +F A++K+
Sbjct: 57 FMGVDRDRSGTLEINELMMGQFPGGIR-LSPQTALRMMRIFDTDFNGHISFYEFMAMYKF 115
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + F + SG ++ E+ AL G+ + T +L+ + G + +
Sbjct: 116 MELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRT-SLLLHRLFARGMAFCDLNCW 174
Query: 133 IHCCV 137
I C
Sbjct: 175 IAICA 179
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 2 AMPPPEF--LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTG 59
++ P E LR+ F+ D+DK G I+ +L + + P E + L + N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGG 62
Query: 60 QISFEDFGALWKY-----------VTDWQSCFKSFDKDNSGNIDKLELKTAL-GTFGYRL 107
+ F+DF L V + + F+ FD + G I EL+ A+ G+++
Sbjct: 63 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQV 122
Query: 108 GDNTVDILMKKFDHHGKGTILFDDFIH 134
G ++ +++ D +G G + F++F+
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + + + F+ FDKD G I+ +L + T GY + + L ++ + + G + FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 131 DFIHC-----------CVMLNLLTTSFSQHDEDKDGVVT 158
DF+ + + L +F + D + DG ++
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IST EL + P E + +I D++ +G I FE+F
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + + CF+ FDK+ G ID EL L G + + ++ LMK D +
Sbjct: 85 QMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKN 144
Query: 123 GKGTILFDDFIH 134
G I FD+F+
Sbjct: 145 NDGRIDFDEFLK 156
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 2 AMPPPEF--LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTG 59
++ P E LR+ F+ D+DK G I+ +L + + P E + L + N G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGG 62
Query: 60 QISFEDFGALWKY-----------VTDWQSCFKSFDKDNSGNIDKLELKTALGT-FGYRL 107
+ F+DF L V + + F+ FD + G I EL+ A+ G+++
Sbjct: 63 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 122
Query: 108 GDNTVDILMKKFDHHGKGTILFDDFIH 134
G ++ +++ D +G G + F++F+
Sbjct: 123 GHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Score = 33.1 bits (74), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + + + F+ FDKD G I+ +L + T GY + + L ++ + + G + FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 131 DFIHC-----------CVMLNLLTTSFSQHDEDKDGVVT 158
DF+ + + L +F + D + DG ++
Sbjct: 68 DFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 106
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 2 AMPPPEF--LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTG 59
++ P E LR+ F+ D+DK G I+ +L + + P E + L + N G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGG 76
Query: 60 QISFEDFGALWKY-----------VTDWQSCFKSFDKDNSGNIDKLELKTALGT-FGYRL 107
+ F+DF L V + + F+ FD + G I EL+ A+ G+++
Sbjct: 77 HVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQV 136
Query: 108 GDNTVDILMKKFDHHGKGTILFDDFIH 134
G ++ +++ D +G G + F++F+
Sbjct: 137 GHRDIEEIIRDVDLNGDGRVDFEEFVR 163
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 61 ISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFD 120
+S +D + + + + F+ FDKD G I+ +L + T GY + + L ++ +
Sbjct: 12 LSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQIN 71
Query: 121 HHGKGTILFDDFIHC-----------CVMLNLLTTSFSQHDEDKDGVVT 158
+ G + FDDF+ + + L +F + D + DG ++
Sbjct: 72 MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 120
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
+R+ F D D SG I EL++A+ ++P E ++ MI DK+ +G I FE+F
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 69 LWKYVTDWQ-------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
+ + F+ FD DNSG I +L+ G L + + ++ + D
Sbjct: 89 MMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADR 148
Query: 122 HGKGTILFDDFIHCCVMLNL 141
+ I D+FI +L
Sbjct: 149 NDDNEIDEDEFIRIMKKTSL 168
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 67 GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGT 126
G + + + F FD D SG ID ELK A+ G+ + ++ + D G GT
Sbjct: 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 127 ILFDDFIHCCVMLNLLTTSFSQHD 150
I F++F L ++T + D
Sbjct: 81 IDFEEF------LTMMTAKMGERD 98
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
P E ++ + +D+D SG I E ++ + + E + +FD +N+G I+
Sbjct: 61 PKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITI 120
Query: 64 EDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE 95
+D + K + + Q D+++ ID+ E
Sbjct: 121 KDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 158
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF--- 66
++ F D+D G I+T EL + P AE ++ I D + G I+F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAE-LQDXINEVDADGNGTINFPEFLTX 71
Query: 67 GALWKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A TD + F+ FDKD +G I EL+ G +L D VD +++ D
Sbjct: 72 XARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IST EL + P E + +I D++ +G I FE+F
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + +CF+ FDK+ G ID EL L G + + ++ LMK D +
Sbjct: 85 QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKN 144
Query: 123 GKGTILFDDFIH 134
G I FD+F+
Sbjct: 145 NDGRIDFDEFLK 156
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IST EL + P E + +I D++ +G I FE+F
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + +CF+ FDK+ G ID EL L G + + ++ LMK D +
Sbjct: 82 QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKN 141
Query: 123 GKGTILFDDFIH 134
G I FD+F+
Sbjct: 142 NDGRIDFDEFLK 153
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 74 EFLVMMV 80
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IST EL + P E + +I D++ +G I FE+F
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + CF+ FDK+ G ID EL L G + + ++ LMK D +
Sbjct: 85 QMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKN 144
Query: 123 GKGTILFDDFIH 134
G I FD+F+
Sbjct: 145 NDGRIDFDEFLK 156
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IS EL + P E + +I D++ +G I FE+F
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + CF+ FD++ G ID EL G + D ++ LMK D +
Sbjct: 82 QMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKN 141
Query: 123 GKGTILFDDFI 133
G I FD+F+
Sbjct: 142 NDGRIDFDEFL 152
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 74 EFLVMMV 80
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IST EL + P E + +I D++ +G I FE+F
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + +CF+ FDK+ G ID EL L G + + ++ LMK D +
Sbjct: 85 QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKN 144
Query: 123 GKGTILFDDFIH 134
G I FD+F+
Sbjct: 145 NDGRIDFDEFLK 156
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF--- 66
++ F D+D G I+T EL + P AE ++ I D + G I F +F
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAE-LQDXINEVDADGNGTIDFPEFLTX 72
Query: 67 GALWKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A TD + F+ FDKD +G I EL+ G +L D VD +++ D
Sbjct: 73 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADID 132
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 133 GDGQVNYEEFVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF--- 66
++ F D+D G I+T EL + P AE ++ I D + G I F +F
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAE-LQDXINEVDADGNGTIDFPEFLTX 71
Query: 67 GALWKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A TD + F+ FDKD +G I EL+ G +L D VD +++ D
Sbjct: 72 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
Query: 123 GKGTILFDDFIH 134
G G + +++F+
Sbjct: 132 GDGQVNYEEFVQ 143
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-G 67
+R+ F D D +G I EL++A+ ++P E ++ MI DK TG+++F DF
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 68 ALWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
+ + +++ + FK FD D +G I LK G L D + ++ + D
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADR 126
Query: 122 HGKGTILFDDFIHC 135
G G + +F+
Sbjct: 127 DGDGEVSEQEFLRI 140
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ + F FD D +G ID ELK A+ G+ + ++ + D G G + F DF
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDF-- 64
Query: 135 CCVMLNLLTTSFSQHD 150
L ++T S+ D
Sbjct: 65 ----LTVMTQKMSEKD 76
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
P E ++ + +D++ +G ++ + ++ + E + +FD + TG+ISF
Sbjct: 39 PKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISF 98
Query: 64 EDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE 95
++ + K + + Q D+D G + + E
Sbjct: 99 KNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 136
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D SG IS +EL + + P AE LM D + I F +F AL
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLM-NEIDVDGNHAIEFSEFLAL 72
Query: 70 WKYV-------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ FK FDK+ G I ELK L + G +L D VD ++++
Sbjct: 73 MSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SD 131
Query: 123 GKGTILFDDF 132
G G I F
Sbjct: 132 GSGEINIKQF 141
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDKDNSG+I EL T + + G + V LM + D G I F
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFS 67
Query: 131 DF-------IHCCVMLNLLTTSFSQHDEDKDGVVT 158
+F + C L +F D++ DG+++
Sbjct: 68 EFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLIS 102
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D +G IS++EL + + P AE LM D + QI F +F AL
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSEFLAL 71
Query: 70 WKYV-------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ FK FDK+ G I ELK L + G +L D VD ++++
Sbjct: 72 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SD 130
Query: 123 GKGTILFDDF 132
G G I F
Sbjct: 131 GSGEINIQQF 140
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDKDN+G+I EL T + + G + V+ LM + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 131 DFI 133
+F+
Sbjct: 67 EFL 69
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 6 PEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
EF ++ F D+D +G IS++EL + + P AE LM D + QI F +
Sbjct: 11 AEF-KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSE 68
Query: 66 FGALWKYV-------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
F AL + FK FDK+ G I ELK L + G +L D VD ++++
Sbjct: 69 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128
Query: 119 FDHHGKGTILFDDF 132
G G I F
Sbjct: 129 V-SDGSGEINIQQF 141
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDKDN+G+I EL T + + G + V+ LM + D G I F
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67
Query: 131 DFI 133
+F+
Sbjct: 68 EFL 70
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAE--TVR--LMIGMFDKNNTGQISFE 64
+++ FQ D+D G +S EL AL + P NAE T++ L FD + +
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK 66
Query: 65 DFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGK 124
+ + F++ DK+ +G I + EL+ L G L + V+ LMK+ G
Sbjct: 67 PIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGD 126
Query: 125 GTILFDDFIHCCV 137
G I ++ F+ V
Sbjct: 127 GAINYESFVDMLV 139
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGCISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+F+
Sbjct: 151 DEFLE 155
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
L++ F +D DKSG I+ EL+ L +E + L D +N+G I +++F A
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAA-DVDNSGTIDYKEFIA 87
Query: 69 LWKYVTDWQ------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
++ + + F FDKD SG I EL+ A FG + D ++ L + D
Sbjct: 88 ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQD 145
Query: 123 GKGTILFDDFI 133
G I +++F+
Sbjct: 146 NDGRIDYNEFV 156
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + F D D SG I ELK L G L ++ + L + D GTI + +F
Sbjct: 26 IAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEF 85
Query: 133 IHCCVMLNLLT------TSFSQHDEDKDGVVT 158
I + LN + +F+ D+D G +T
Sbjct: 86 IAATLHLNKIEREDHLFAAFTYFDKDGSGYIT 117
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+F+
Sbjct: 151 DEFLE 155
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+F+
Sbjct: 151 DEFLE 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF------ 66
F D D G IS EL + P E + +I D++ +G I FE+F
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTP-TKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 67 ----GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
A K + F+ FD++ G ID EL G + D ++ LMK D +
Sbjct: 82 QMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKN 141
Query: 123 GKGTILFDDFI 133
G I FD+F+
Sbjct: 142 NDGRIDFDEFL 152
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 14 EMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 74 EFLVMMV 80
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + + FK FD+D +G I K EL TA+ + GY + +++++++ D G G + F++F
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 133 I 133
+
Sbjct: 95 V 95
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E +R+ F+ DRD +G IS EL A+ + + P N + ++I D + GQ+ FE+F
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMP-NEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 67 GALW 70
L
Sbjct: 95 VTLL 98
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 60 QISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKF 119
++S E+ G L + FK D DNSG I ELK L G L ++ + LM
Sbjct: 3 RLSEEEIGGL-------KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 55
Query: 120 DHHGKGTILFDDFIHCCVMLNL------LTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
D GTI + +FI V LN L ++FS D+D G +TL Q F L
Sbjct: 56 DIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
L+++F+ +D D SG I+ +EL+ L + +E LM D + +G I + +F A
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA-DIDKSGTIDYGEFIA 70
Query: 69 LWKYVTDWQ------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
++ + S F FDKD SG I E++ A FG L D +D ++K+ D
Sbjct: 71 ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQD 128
Query: 123 GKGTILFDDF 132
G I + +F
Sbjct: 129 NDGQIDYGEF 138
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 3 MPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRL--MIGMFDKNNTGQ 60
+ E L F D+D SG I+ +E+Q A K F + + + MI D++N GQ
Sbjct: 78 LEREENLVSAFSYFDKDGSGYITLDEIQQA-----CKDFGLDDIHIDDMIKEIDQDNDGQ 132
Query: 61 ISFEDFGALWK 71
I + +F A+ +
Sbjct: 133 IDYGEFAAMMR 143
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGAL 69
++ F D+D +G IS++EL + + P AE LM D + QI F +F AL
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLM-NEIDVDGNHQIEFSEFLAL 71
Query: 70 WKYV-------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGD 109
+ FK FDK+ G I ELK L + G +L D
Sbjct: 72 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 118
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDKDN+G+I EL T + + G + V+ LM + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 131 DFI 133
+F+
Sbjct: 67 EFL 69
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF-GA 68
++ F D+D G I+T +L + + P AE ++ MI + G I F F
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAE-LQDMINEVGADGNGTIDFPQFLTM 372
Query: 69 LWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ + + D S F+ F KD +G I +L+ + G +L D VD ++++
Sbjct: 373 MARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGID 432
Query: 123 GKGTILFDDFIH 134
G G + ++ F+
Sbjct: 433 GDGQVNYEQFVQ 444
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ +DK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+F+
Sbjct: 151 DEFLE 155
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+++
Sbjct: 151 DEWLE 155
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ DK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+F+
Sbjct: 151 DEFLE 155
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 20 KSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW--------- 70
+ G IST EL + P E ++ MI D++ +G + F++F +
Sbjct: 32 EDGSISTKELGKVMRMLGQNP-TPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSK 90
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +
Sbjct: 91 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 130 DDFIH 134
D+ +
Sbjct: 151 DEXLE 155
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 80 FKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC--- 136
F+ D+D S ++D E + L G L + + +K+D +G GT+ ++F+
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 137 ---VMLNLLTTSFSQHDEDKDGVVTL 159
++ +F++ D DGVVT+
Sbjct: 103 MSQAREAVIAAAFAKLDRSGDGVVTV 128
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ + F+ FDKD +G I EL+ + G +L D VD ++++ D G G I +++F+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 135 C 135
Sbjct: 65 V 65
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 PPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
E L++ F+ D+D++G IS EL+ ++N + E V MI D + GQI++E
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 65 DF 66
+F
Sbjct: 61 EF 62
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ + F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 78 SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCV 137
FK FD+D +G I EL+ + G +L D+ VD ++++ D G G I +++F+ V
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 71
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 5 PPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
E L + F+ DRD +GLIS EL+ ++N K + E V MI D + G I++E
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDE-VDEMIREADIDGDGHINYE 64
Query: 65 DF 66
+F
Sbjct: 65 EF 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ + F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 8 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 11 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + +++ F FDKDN+G+I EL T + + G + V+ LM + D G I F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 131 DFI 133
+F+
Sbjct: 67 EFL 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 9 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ FDKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 12 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFI 133
+ + F FD D SG ID ELK A+ G+ + ++ + D G GTI F++F+
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
+R+ F D D SG I EL++A+ ++P E ++ MI DK+ +G I FE+F
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTIDFEEF 88
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 67 GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGT 126
G + + + F FD D SG ID ELK A+ G+ + ++ D G GT
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 127 ILFDDFIHCCVMLNLLTTSFSQHD 150
I F++F L ++T + D
Sbjct: 61 IDFEEF------LQMMTAKMGERD 78
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
P E ++ + +D+D SG I E ++ + + E + +FD + TG+ISF
Sbjct: 41 PKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISF 100
Query: 64 EDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE 95
++ + K + + Q D+D G +++ E
Sbjct: 101 KNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEE 138
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ FDKD +G I +L+ + G +L D VD ++++ D G G + ++DF+
Sbjct: 10 REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQ 60
M E +R+ F+ D+D +G IS +L+ ++N + E V MI D + GQ
Sbjct: 1 MDTDSEEEIREAFRVFDKDGNGYISAADLRHVMTN-LGEKLTDEEVDEMIREADIDGDGQ 59
Query: 61 ISFEDF 66
+++EDF
Sbjct: 60 VNYEDF 65
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFI 133
+ + FK FDKD +G I EL+ + G +L D V+ ++K+ D G G + +++F+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 PPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
E L++ F+ D+D++G IS +EL+ + N + E V MI D + GQ+++E
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 65 DF 66
+F
Sbjct: 61 EF 62
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ + F FD + +G+ID ELK A+ G+ + + LM ++D G G I FDDF
Sbjct: 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF-- 65
Query: 135 CCVMLNLLTTSFSQHD 150
L+++T D
Sbjct: 66 ----LDIMTEKIKNRD 77
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
+++ F D +K+G I +EL++A+ + E + LM +D+ G I F+DF
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELM-NEYDREGNGYIGFDDF 65
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFI 133
+ FK FDKD +G I EL+ + G +L D V+ ++K+ D G G + +++F+
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQ 60
M E L++ F+ D+D++G IS +EL+ + N + E V MI D + GQ
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 61 ISFEDF 66
+++E+F
Sbjct: 62 VNYEEF 67
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++++ D G GTI F+
Sbjct: 6 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 66 EFLVMMV 72
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
V ++ F D++ GNI KL+L+ L G L N D+L+ + D G G I + +F
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEF 112
Query: 133 IHCCV-----MLNLLTTSFSQHDEDKDGVVT 158
+ + L+ +F D D DG +T
Sbjct: 113 LAAAIDRRQLSKKLIYCAFRVFDVDNDGEIT 143
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWK----PFNAETVRLMIGMFDKNNTGQISFEDFGA 68
F+ D D G I+T EL L NG + + V+ MI DKN G+I F +F
Sbjct: 131 FRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSE 190
Query: 69 LWK 71
+ K
Sbjct: 191 MMK 193
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 9 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 66
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++K
Sbjct: 67 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 126
Query: 119 FDHHG--KGTILFDDFI 133
D +G + ++DF+
Sbjct: 127 TDLQEDLEGNVKYEDFV 143
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 68
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++K
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
Query: 119 FDHHG--KGTILFDDFI 133
D +G + ++DF+
Sbjct: 129 TDLQEDLEGNVKYEDFV 145
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 68
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++K
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 128
Query: 119 FDHHG--KGTILFDDFI 133
D +G + ++DF+
Sbjct: 129 TDLQEDLEGNVKYEDFV 145
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 65
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++K
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 125
Query: 119 FDHHG--KGTILFDDFI 133
D +G + ++DF+
Sbjct: 126 TDLQEDLEGNVKYEDFV 142
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPF-NAETVRLMIGMFDKNNTGQISFEDFGALW 70
+F+++D + G +S E++ +S + +P N + ++L+ D + G+I +F
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVS--SKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 71 KYVTD---------WQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
V + + +K D D G + K E+ T FGY + VD +MK D
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVVDQIMKA-DA 118
Query: 122 HGKGTILFDDFI 133
+G G I ++F+
Sbjct: 119 NGDGYITLEEFL 130
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 65
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++K
Sbjct: 66 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKL 125
Query: 119 FDHHG--KGTILFDDFI 133
D +G + ++DF+
Sbjct: 126 TDLQEDLEGNVKYEDFV 142
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 74 TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHG--KGTILFDD 131
D+ FK+FD++ G I EL+ L G RL D VD ++K D +G + ++D
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 132 FI 133
F+
Sbjct: 144 FV 145
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+ F+ DKD +G I EL+ + G +L D VD ++++ D G G + +++F+
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I L T + G +D ++++ D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Query: 131 DFIHCCV 137
+F+ V
Sbjct: 77 EFLVMMV 83
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQMALSN--GTWKPFNAETVRLMIGMFDKNNT 58
++ P+ ++ +F +D+DKSG I ELQ+ L N + + + + + D +
Sbjct: 36 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 95
Query: 59 GQISFEDFGALWK 71
G+I E+F +L K
Sbjct: 96 GKIGVEEFQSLVK 108
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQMALSN--GTWKPFNAETVRLMIGMFDKNNT 58
++ P+ ++ +F +D+DKSG I ELQ+ L N + + + + + D +
Sbjct: 35 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 94
Query: 59 GQISFEDFGALWK 71
G+I E+F +L K
Sbjct: 95 GKIGVEEFQSLVK 107
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 21 SGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF---GALW------- 70
SG +ST+++ + L + + T+R +I FD G I F+ F GA +
Sbjct: 28 SGRVSTDQIGIILEVLGIQQTKS-TIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86
Query: 71 -KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILF 129
+ + + F+ +DK+ +G I ++ L L +D ++ + D G GT+ F
Sbjct: 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 146
Query: 130 DDFIHC 135
++F+
Sbjct: 147 EEFMGV 152
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
LR+ F+ D++ +G IST+ ++ L+ + ++E + MI D + +G + FE+F
Sbjct: 93 LREAFRLYDKEGNGYISTDVMREILAE-LDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 76 WQSCFKSFD-KDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF-- 132
++ F+ F+ + SG + ++ L G + +T+ L+ +FD G G I FD F
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 133 ---------IHCCVMLNLLTTSFSQHDEDKDGVVT 158
++ M L +F +D++ +G ++
Sbjct: 75 IGARFLGEEVNPEQMQQELREAFRLYDKEGNGYIS 109
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ D Q F++FD+D G+I EL+ A+ G L +D ++++ D G + +++F
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 133 IH 134
Sbjct: 65 AR 66
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFI 133
+ + F FD D +G ID ELK A+ G+ + ++ + D G G + F DF+
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 4 PPPEF-------LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKN 56
P PE +R+ F D D +G I EL++A+ ++P E ++ MI DK
Sbjct: 21 PKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDKE 79
Query: 57 NTGQISFEDF 66
TG+++F DF
Sbjct: 80 GTGKMNFGDF 89
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + ++++ F FD D G+I EL T + G +D ++ + D G GTI F+
Sbjct: 17 EMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
Query: 131 DFI 133
+F+
Sbjct: 77 EFL 79
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
V++++ F+ FD + +G I K L+T L FG R+ + + + D G G I F +F
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEF 64
Query: 133 IHCCVMLNLLTTS 145
+ TTS
Sbjct: 65 LSMMGRRMKQTTS 77
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 68 ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTI 127
A K + +CF+ FDK+ G ID EL L G + + ++ LMK D + G I
Sbjct: 4 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRI 63
Query: 128 LFDDFI 133
FD+F+
Sbjct: 64 DFDEFL 69
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
E L + F+ D++ G I EL L T + E + ++ DKNN G+I F
Sbjct: 7 KSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLMKDSDKNNDGRIDF 65
Query: 64 EDFGALWKYV 73
++F + + V
Sbjct: 66 DEFLKMMEGV 75
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNID 92
+FDKN G I E+ G + + D + K DK+N G ID
Sbjct: 18 IFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
D + FK FD + G I EL AL T G D V +M + D G G I F++FI
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 62
Query: 135 CC 136
C
Sbjct: 63 FC 64
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 12 IFQRVDRDKSGLISTNE-LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW 70
+ VD DK+G I +E + +A+ T + E + MFD +N+G+IS + ++
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTL--LSRERLERAFRMFDSDNSGKISSTELATIF 444
Query: 71 KYVTD-----WQSCFKSFDKDNSGNID 92
V+D W+S DK+N G +D
Sbjct: 445 G-VSDVDSETWKSVLSEVDKNNDGEVD 470
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L F+ D D SG IS+ EL ++ET + ++ DKNN G++ F++F
Sbjct: 418 ERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
+ F+ FD DNSG I EL T G + T ++ + D + G + FD+F
Sbjct: 421 ERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
Query: 137 VML 139
+ L
Sbjct: 479 LKL 481
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 54 DKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVD 113
DK+ ++S E+ G L + FK D DNSG I ELK L G L ++ +
Sbjct: 10 DKHMAERLSEEEIGGL-------KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIK 62
Query: 114 ILMKKFDHHGKGTILFDDFIHCCV 137
LM D GTI + +FI V
Sbjct: 63 DLMDAADIDKSGTIDYGEFIAATV 86
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
D + FK FD + G I EL AL T G D V +M + D G G I F++FI
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 61
Query: 135 CC 136
C
Sbjct: 62 FC 63
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 12 IFQRVDRDKSGLISTNE-LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW 70
+ VD DK+G I +E + +A+ T + E + MFD +N+G+IS + ++
Sbjct: 410 VLDAVDFDKNGYIEYSEFVTVAMDRKTL--LSRERLERAFRMFDSDNSGKISSTELATIF 467
Query: 71 KYVTD-----WQSCFKSFDKDNSGNID 92
V+D W+S DK+N G +D
Sbjct: 468 G-VSDVDSETWKSVLSEVDKNNDGEVD 493
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L F+ D D SG IS+ EL ++ET + ++ DKNN G++ F++F
Sbjct: 441 ERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFDEF 497
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
+ F+ FD DNSG I EL T G + T ++ + D + G + FD+F
Sbjct: 444 ERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
Query: 137 VML 139
+ L
Sbjct: 502 LKL 504
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 12 IFQRVDRDKSGLISTNE-LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW 70
+ VD DK+G I +E + +A+ T + E + MFD +N+G+IS + ++
Sbjct: 411 VLDAVDFDKNGYIEYSEFVTVAMDRKTL--LSRERLERAFRMFDSDNSGKISSTELATIF 468
Query: 71 KYVTD-----WQSCFKSFDKDNSGNID 92
V+D W+S DK+N G +D
Sbjct: 469 G-VSDVDSETWKSVLSEVDKNNDGEVD 494
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L F+ D D SG IS+ EL ++ET + ++ DKNN G++ F++F
Sbjct: 442 ERLERAFRMFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFDEF 498
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
+ F+ FD DNSG I EL T G + T ++ + D + G + FD+F
Sbjct: 445 ERAFRMFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
Query: 137 VML 139
+ L
Sbjct: 503 LKL 505
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 11 DIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALW 70
+ F D + G + +EL++A+ ++ E + L I +D + ++DF +
Sbjct: 27 EAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDL-IDEYDSEGRHLMKYDDFYIVM 85
Query: 71 KY-------VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHG 123
+ + + F+ FD D++G I L+ G L D + ++++FD G
Sbjct: 86 GEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDG 145
Query: 124 KGTILFDDFIHCCV 137
G I ++FI C
Sbjct: 146 DGEINENEFIAICT 159
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 78 SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCV 137
F FD +N G +D ELK A+ G+ L + L+ ++D G+ + +DDF V
Sbjct: 27 EAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDF--YIV 84
Query: 138 M---------LNLLTTSFSQHDEDKDGVVTL 159
M L+ + +F D+D G +++
Sbjct: 85 MGEKILKRDPLDEIKRAFQLFDDDHTGKISI 115
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 3 MPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQIS 62
+P E L D+ D + L+ ++ + + K + ++ +FD ++TG+IS
Sbjct: 56 LPKREIL-DLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKIS 114
Query: 63 FEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE 95
++ + K + + ++ + FD D G I++ E
Sbjct: 115 IKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENE 153
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + D++ F FDKD G I EL T + + + + ++ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 131 DFIH 134
+F+
Sbjct: 67 EFLS 70
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 3 MPPPEFLRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQ 60
M + ++ +F +D+DKSG I +EL L + + +A+ + ++ DK+ G+
Sbjct: 1 MKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGK 60
Query: 61 ISFEDFGAL 69
I E+F L
Sbjct: 61 IGVEEFSTL 69
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWK----PFNAETVRLMIGMFDKNNTGQISFEDFGA 68
F+ D D G I+T EL L NG K + V+ MI DKNN G+I F +F
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSE 187
Query: 69 LWK 71
+ K
Sbjct: 188 MMK 190
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
V +S F D+D G I K +LK L G +L N D+L+ + D G G I + +F
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYN-FDLLLDQIDSDGSGKIDYTEF 109
Query: 133 IHCC-----VMLNLLTTSFSQHDEDKDGVVT 158
I + L+ +F D D DG +T
Sbjct: 110 IAAALDRKQLSKKLIYCAFRVFDVDNDGEIT 140
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
+ + D++ F FDKD G I EL T + + + + ++ + D G GTI FD
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 131 DFIH 134
+F+
Sbjct: 67 EFLS 70
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 9 LRDIFQRVD--RDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L+D+F+ D + G + +L P N + +G K + FE+F
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDV--FAVGGTHKMGEKSLPFEEF 68
Query: 67 GALWKYV--------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
++ + D+ FK+FD++ G I EL+ L G RL D VD ++
Sbjct: 69 LPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINL 128
Query: 119 FDHHG--KGTILFDDFI 133
D +G + +++F+
Sbjct: 129 TDLQEDLEGNVKYEEFV 145
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ +F +D+DKSG I +EL L + + +A+ + ++ DK+ +G+I E+F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Query: 67 GAL 69
L
Sbjct: 103 STL 105
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ D + FK FD + G I EL AL T G D V +M + D G G I FD+F
Sbjct: 10 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFISFDEF 68
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 74 TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHG--KGTILFDD 131
D+ FK+FD++ G I EL+ L G RL D VD ++ D +G + +++
Sbjct: 85 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 144
Query: 132 FI 133
F+
Sbjct: 145 FV 146
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 74 TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHG--KGTILFDD 131
D+ FK+FD++ G I EL+ L G RL D VD ++ D +G + +++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 132 FI 133
F+
Sbjct: 144 FV 145
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +D
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 131 DFIH 134
+F+
Sbjct: 62 EFLE 65
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
E L D+F+ D++ G I EL++ L T + + + ++ DKNN G+I +
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 64 EDFGALWKYV 73
++F K V
Sbjct: 61 DEFLEFMKGV 70
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 69 LWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTIL 128
+ K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I
Sbjct: 1 MGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 129 FDDFIH 134
+D+F+
Sbjct: 61 YDEFLE 66
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
E L D+F+ D++ G I +EL++ L T + + + ++ DKNN G+I +
Sbjct: 3 KSEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 64 EDFGALWKYV 73
++F K V
Sbjct: 62 DEFLEFMKGV 71
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +D
Sbjct: 4 KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
Query: 131 DFIH 134
+F+
Sbjct: 64 EFLE 67
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQ 60
M E L D+F+ D++ G I EL++ L T + + + ++ DKNN G+
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGR 59
Query: 61 ISFEDFGALWKYV 73
I +++F K V
Sbjct: 60 IDYDEFLEFMKGV 72
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTF-GYRLGDNTVDILMKKFDHHGKGTILFDD 131
V + + F+ FD + G I EL+ A+ G+++G ++ +++ D +G G + F++
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 132 FIH 134
F+
Sbjct: 66 FVR 68
Score = 33.1 bits (74), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
LRD F+ D + G IST+EL+ A+ + +I D N G++ FE+F
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +D
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
Query: 131 DFIH 134
+F+
Sbjct: 72 EFLE 75
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
E L D+F+ D++ G I EL++ L T + + + ++ DKNN G+I +
Sbjct: 12 KTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 70
Query: 64 EDFGALWKYV 73
++F K V
Sbjct: 71 DEFLEFMKGV 80
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 80 FKSFDKDNSGNIDKLEL---KTALGTFGYRLG-----DNTVDILMKKFDHHGKGTILFDD 131
FK DK+ G +DK EL L F LG + VD ++K+ D G I + +
Sbjct: 361 FKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSE 420
Query: 132 FIHCCVMLNL------LTTSFSQHDEDKDGVVT 158
FI C+ + L +F+ D DK G +T
Sbjct: 421 FISVCMDKQILFSEERLRRAFNLFDTDKSGKIT 453
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 13/79 (16%)
Query: 5 PPEFLRDIFQRVDRDKSGLISTNELQ-----MALSNGTWKPFNAETVRLMIGMFDKNNTG 59
E LR F D DKSG I+ EL ++S TW ++G D+N
Sbjct: 433 SEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWND--------VLGEADQNKDN 484
Query: 60 QISFEDFGALWKYVTDWQS 78
I F++F ++ + D ++
Sbjct: 485 MIDFDEFVSMMHKICDHKT 503
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 6 PEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
E + +I + VD DK+G I +E +++ F+ E +R +FD + +G+I+ E+
Sbjct: 398 EEEVDNILKEVDFDKNGYIEYSEF-ISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEE 456
Query: 66 FGALW 70
L+
Sbjct: 457 LANLF 461
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIG-MFDKNNTGQISFED 65
E ++ F+ DR G I ++ + P NAE ++++ D+ + ++ FE
Sbjct: 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 69
Query: 66 FGALWKYVT---------DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILM 116
F + + V D+ F+ FDK+ +G + EL+ L T G ++ + V+ ++
Sbjct: 70 FLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL 129
Query: 117 KKFDHHGKGTILFDDFI 133
+ G I ++ F+
Sbjct: 130 AGHE-DSNGCINYEAFL 145
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 6 PEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFN-------AETVRLMIGMFDKNNT 58
EF++ +++ D D SG I T EL+ L + K AE LM+ +FD NN
Sbjct: 103 EEFMK-TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNND 161
Query: 59 GQISFEDFGALWKYV--------------TDWQSCFKSFDKDNSGNIDKLELKTAL 100
G++ + L ++ F+ +D+D +G ID+ EL L
Sbjct: 162 GKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFD 130
K + F+ FDK+ G ID ELK L G + ++ ++ LMK D + G I +D
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 131 DFIH 134
+F+
Sbjct: 67 EFLE 70
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISF 63
E L D+F+ D++ G I EL++ L T + + + ++ DKNN G+I +
Sbjct: 7 KTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDY 65
Query: 64 EDFGALWKYV 73
++F K V
Sbjct: 66 DEFLEFMKGV 75
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIG-MFDKNNTGQISFEDFGA 68
++ FQ DR G I ++ + P NAE ++++ D+ N + FE F
Sbjct: 12 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 71
Query: 69 LWKYVTDW--QSCF-------KSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKF 119
+ + + Q CF + FDK+ +G + E++ L T G ++ + V+ L+
Sbjct: 72 MMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGH 131
Query: 120 DHHGKGTILFDDFIH 134
+ G I +++ +
Sbjct: 132 EDS-NGCINYEELVR 145
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF---GAL 69
F+++D D SG +S E M+L P V+ +I +FD + G++ F++F +
Sbjct: 27 FKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIEGVSQ 81
Query: 70 WKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTF-GYRLGD----NTVDILMKKFD 120
+ D + F+ +D D G I EL L G L D VD + D
Sbjct: 82 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 141
Query: 121 HHGKGTILFDDFIHCCVMLNL 141
G G I F++F C V+ L
Sbjct: 142 KDGDGRISFEEF--CAVVGGL 160
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNE----LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
LR F+ D DK G IS E L+M + N + V I DK+ G+ISFE
Sbjct: 92 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 151
Query: 65 DFGAL 69
+F A+
Sbjct: 152 EFCAV 156
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ +F +D+DKSG I +EL L + + +A+ + ++ DK+ G+I E+F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 67 GAL 69
L
Sbjct: 103 STL 105
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF---GAL 69
F+++D D SG +S E M+L P V+ +I +FD + G++ F++F +
Sbjct: 26 FKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIEGVSQ 80
Query: 70 WKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTF-GYRLGD----NTVDILMKKFD 120
+ D + F+ +D D G I EL L G L D VD + D
Sbjct: 81 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 140
Query: 121 HHGKGTILFDDFIHCCVMLNL 141
G G I F++F C V+ L
Sbjct: 141 KDGDGRISFEEF--CAVVGGL 159
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNE----LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
LR F+ D DK G IS E L+M + N + V I DK+ G+ISFE
Sbjct: 91 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 150
Query: 65 DFGAL 69
+F A+
Sbjct: 151 EFCAV 155
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIG-MFDKNNTGQISFEDFGA 68
++ FQ DR G I ++ + P NAE ++++ D+ N + FE F
Sbjct: 10 KEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLP 69
Query: 69 LWKYVTDW--QSCF-------KSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKF 119
+ + + Q CF + FDK+ +G + E++ L T G ++ + V+ L+
Sbjct: 70 MMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGH 129
Query: 120 DHHGKGTILFDDFIH 134
+ G I +++ +
Sbjct: 130 EDS-NGCINYEELVR 143
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF---GAL 69
F+++D D SG +S E M+L P V+ +I +FD + G++ F++F +
Sbjct: 12 FKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIEGVSQ 66
Query: 70 WKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTF-GYRLGD----NTVDILMKKFD 120
+ D + F+ +D D G I EL L G L D VD + D
Sbjct: 67 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 126
Query: 121 HHGKGTILFDDFIHCCVMLNL 141
G G I F++F C V+ L
Sbjct: 127 KDGDGRISFEEF--CAVVGGL 145
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNE----LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
LR F+ D DK G IS E L+M + N + V I DK+ G+ISFE
Sbjct: 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 65 DFGAL 69
+F A+
Sbjct: 137 EFCAV 141
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF---GAL 69
F+++D D SG +S E M+L P V+ +I +FD + G++ F++F +
Sbjct: 13 FKKLDLDNSGSLSVEEF-MSLPELQQNPL----VQRVIDIFDTDGNGEVDFKEFIEGVSQ 67
Query: 70 WKYVTDWQS----CFKSFDKDNSGNIDKLELKTALGTF-GYRLGD----NTVDILMKKFD 120
+ D + F+ +D D G I EL L G L D VD + D
Sbjct: 68 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 127
Query: 121 HHGKGTILFDDFIHCCVMLNL 141
G G I F++F C V+ L
Sbjct: 128 KDGDGRISFEEF--CAVVGGL 146
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNE----LQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
LR F+ D DK G IS E L+M + N + V I DK+ G+ISFE
Sbjct: 78 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
Query: 65 DFGAL 69
+F A+
Sbjct: 138 EFCAV 142
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ +F +D+DKSG I +EL L + + +A+ ++++ DK+ G+I ++F
Sbjct: 44 VKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
Query: 67 GAL 69
L
Sbjct: 104 STL 106
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNA---------ETVRLMIGMFDKNNTG- 59
+DIF D+ G I+ + L L + P N ++R + TG
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 60 -QISFEDFGALWKYVT-DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMK 117
+++ ++ A K T D+ F+ FDK+++G + +L+ L G +L D VD L+K
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 118 KFDHHGKGTILFDDFIH 134
+ G I + FI
Sbjct: 127 GVEVDSNGEIDYKKFIE 143
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKFDHHGKGTILF 129
D + FK+ D D SG I++ ELK L +F G L D +K D G G I
Sbjct: 41 ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGI 100
Query: 130 DDF 132
D+F
Sbjct: 101 DEF 103
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ +F +D+DKSG I +EL L + +A+ + ++ DK+ G+I E+F
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 67 GAL 69
L
Sbjct: 103 STL 105
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 15/152 (9%)
Query: 4 PPPEF-------LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKN 56
P PE +R+ F D D +G I EL++A ++P E + + DK
Sbjct: 21 PKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXIS-EIDKE 79
Query: 57 NTGQISFEDFGALWKYVTDWQ-------SCFKSFDKDNSGNIDKLELKTALGTFGYRLGD 109
TG+ +F DF + + FK FD D +G I LK G L D
Sbjct: 80 GTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTD 139
Query: 110 NTVDILMKKFDHHGKGTILFDDFIHCCVMLNL 141
+ + + D G G + +F+ +L
Sbjct: 140 EELQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
D+ F+ FDK+++G + +L+ L G +L D VD L+K + G I + FI
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
+ VD DK+G I +E + ++ + E + FD +N+G+IS + ++
Sbjct: 387 VLDAVDFDKNGYIEYSEF-VTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFG 445
Query: 72 YVTD-----WQSCFKSFDKDNSGNID 92
V+D W+S DK+N G +D
Sbjct: 446 -VSDVDSETWKSVLSEVDKNNDGEVD 470
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L F+ D D SG IS+ EL ++ET + ++ DKNN G++ F++F
Sbjct: 418 ERLERAFRXFDSDNSGKISSTELATIFG---VSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 77 QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
+ F+ FD DNSG I EL T G + T ++ + D + G + FD+F
Sbjct: 421 ERAFRXFDSDNSGKISSTELATIFGVSD--VDSETWKSVLSEVDKNNDGEVDFDEFQQXL 478
Query: 137 VML 139
+ L
Sbjct: 479 LKL 481
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 78 SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
F FD +N G +D ELK A G+ L + L+ ++D G+ +DDF
Sbjct: 27 EAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDF 81
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + + F+ FD D++G I L+ G L D + +++FD G G I ++F
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
Query: 133 IHCCV 137
I C
Sbjct: 155 IAICT 159
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I Q VD D++G I +E + + + E + FD + +G+I+ E+ G L+
Sbjct: 366 ILQSVDFDRNGYIEYSEF-VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 424
Query: 72 YVTD-----WQSCFKSFDKDNSGNID 92
VT+ W + DK+N G +D
Sbjct: 425 -VTEVDDETWHQVLQECDKNNDGEVD 449
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E L FQ+ D D SG I+ EL + ET ++ DKNN G++ FE+F
Sbjct: 397 ERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQVLQECDKNNDGEVDFEEF 453
Query: 67 GALWKYVTD 75
+ + + D
Sbjct: 454 VEMMQKICD 462
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 33.9 bits (76), Expect = 0.048, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ ++++ F FD+ +G +D + + L + GY +G+ +M D + G + F F
Sbjct: 724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAF 783
Query: 133 I 133
I
Sbjct: 784 I 784
Score = 30.4 bits (67), Expect = 0.50, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
R F DR K+G++ + + L + + AE R+M + D N G ++F+ F
Sbjct: 727 FRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIM-SIVDPNRMGVVTFQAF 783
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + + F+ FDKD G I+ +L + T GY + + L ++ + + G + FDDF
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Query: 133 IH 134
+
Sbjct: 69 VE 70
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E LR+ F+ D+DK G I+ +L + + P E + L + N G + F+DF
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELS-QQINMNLGGHVDFDDF 68
Query: 67 GAL 69
L
Sbjct: 69 VEL 71
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ +F +D+DK G I +EL L + + +A+ + ++ DK+ G+I E+F
Sbjct: 43 VKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 67 GAL 69
L
Sbjct: 103 STL 105
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 41 FNAETVRLMIGMFDKNNT--GQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKT 98
+AE ++ IG F ++ + F+ G K D + F DKD G ID+ EL +
Sbjct: 6 LSAEDIKKAIGAFTAADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKDGFIDEDELGS 65
Query: 99 ALGTF---GYRLGDNTVDILMKKFDHHGKGTILFDDF 132
L F L LM D G G I ++F
Sbjct: 66 ILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSN--GTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ F +D+DKSG I +EL++ L N + + + + DK+ G I ++F
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
Query: 67 GALWK 71
A+ K
Sbjct: 103 AAMIK 107
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKF 119
F G K + D + F D+D SG I++ ELK L F L D +
Sbjct: 30 FAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADG 89
Query: 120 DHHGKGTILFDDF 132
D G G I D+F
Sbjct: 90 DKDGDGMIGVDEF 102
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 49 MIGMFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE------- 95
+ FD TG + FEDF + + F +D + G I+K E
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 96 LKTALGTFGYR-LGDNT----VDILMKKFDHHGKGTILFDDFIHCC 136
+ +G + Y L ++T VD+ +K D + G + D+F+ C
Sbjct: 118 IYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWK 71
I Q VD D++G I +E + + + E + FD + +G+I+ E+ G L+
Sbjct: 92 ILQSVDFDRNGYIEYSEF-VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150
Query: 72 YVTD-----WQSCFKSFDKDNSGNID 92
VT+ W + DK+N G +D
Sbjct: 151 -VTEVDDETWHQVLQECDKNNDGEVD 175
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 3 MPPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQIS 62
+ E L FQ+ D D SG I+ EL + ET ++ DKNN G++
Sbjct: 119 LLSRERLLAAFQQFDSDGSGKITNEELGRLFG---VTEVDDETWHQVLQECDKNNDGEVD 175
Query: 63 FEDFGALWKYVTD 75
FE+F + + + D
Sbjct: 176 FEEFVEMMQKICD 188
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 12 IFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKN--NTGQISFEDFGAL 69
+F R K L ++ AL P NAE + ++G K N +I+FE+F +
Sbjct: 12 LFDRTGDAKITLSQVGDIVRALG---QNPTNAE-INKILGNPSKEEMNAKKITFEEFLPM 67
Query: 70 WKYVT---------DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFD 120
+ D+ + FDK+ +G + EL+ L T G ++ + V+ LMK
Sbjct: 68 LQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-Q 126
Query: 121 HHGKGTILFDDFI 133
G I ++ F+
Sbjct: 127 EDSNGCINYEAFV 139
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 1 MAMPPPEFLRDIFQRVDRDKSGLISTNELQM---------ALSNGTWKPFNAETVRLMIG 51
MA L F+++D + G ++ ELQ ALS K +A+ +I
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAK----LIK 56
Query: 52 MFDKNNTGQISFEDF 66
M DKN+ G+IS E+F
Sbjct: 57 MADKNSDGKISKEEF 71
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 11 DIFQRVDRDKSGLISTNELQMA-LSNGTWKPFNAETVRLMIGMFDKN--------NTGQ- 60
++F++ D++++G + +E+ L F + + FDK+ N G
Sbjct: 52 ELFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSE 111
Query: 61 --ISFEDFGALWKYVTDWQSCFKSFDK-DNSGN--IDKLELKTA---LGTFGYRLGDNTV 112
+ F +F + Y+ D+ FD+ D SGN +D+ E K A L +G ++ D
Sbjct: 112 DFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAA 171
Query: 113 DILMKKFDHHGKGTILFDDFIHCCVMLNL 141
L K+ D +G G++ FD+F + L
Sbjct: 172 --LFKELDKNGTGSVTFDEFAAWASAVKL 198
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKN--NTGQISFEDFG 67
++ F DR I+ +++ P NAE + ++G K N I+FE+F
Sbjct: 11 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAE-INKILGNPSKEEMNAAAITFEEFL 69
Query: 68 ALWKYVT---------DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
+ + D+ + FDK+ +G + EL+ L T G ++ + V+ LMK
Sbjct: 70 PMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 129
Query: 119 FDHHGKGTILFDDFI 133
G I ++ F+
Sbjct: 130 -QEDSNGCINYEAFV 143
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 10 RDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKN--NTGQISFEDFG 67
++ F DR I+ +++ P NAE + ++G K N I+FE+F
Sbjct: 9 KEAFLLFDRTGDAKITASQVGDIARALGQNPTNAE-INKILGNPSKEEMNAAAITFEEFL 67
Query: 68 ALWKYVT---------DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKK 118
+ + D+ + FDK+ +G + EL+ L T G ++ + V+ LMK
Sbjct: 68 PMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 127
Query: 119 FDHHGKGTILFDDFI 133
G I ++ F+
Sbjct: 128 -QEDSNGCINYEAFV 141
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 49 MIGMFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTA--- 99
+ FD TG + FEDF + + F +D + G I+K E+
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 153
Query: 100 ----LGTFGYR-LGDNT----VDILMKKFDHHGKGTILFDDFIHCC 136
+G + Y L ++T VD+ +K D + G + D+F+ C
Sbjct: 154 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
++ F +D+++ G I +L L++ P T + GM + G I+F F
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGKNP----TDEYLEGMMSEA-PGPINFTMFLT 63
Query: 69 LWKYV---TDWQ----SCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDH 121
++ TD + + F FD++ SG I + L+ L T G R D VD + ++
Sbjct: 64 MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPI 123
Query: 122 HGKGTILFDDF 132
KG + +F
Sbjct: 124 DKKGNFNYVEF 134
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMAL----------SNGTWKPFNA---ETVRLMIGMFDK 55
L +IF+++D + G++ +EL SN + + + + ++ + D
Sbjct: 333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDM 392
Query: 56 NNTGQISFEDFGA------LWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGD 109
+ +G I + +F A + + FK FDKD SG I EL +
Sbjct: 393 DGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQM 452
Query: 110 NTVDILMKKFDHHGKGTILFDDFIH 134
++ ++++ D++ G + F++F+
Sbjct: 453 EELESIIEQVDNNKDGEVDFNEFVE 477
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E + F+ D+D SG IST EL S E + +I D N G++ F +F
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQAD-SSIQMEELESIIEQVDNNKDGEVDFNEF 475
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Query: 80 FKSFDKDNSGNIDKLELKTALGTFGYRLG--------------DNTVDILMKKFDHHGKG 125
F+ D +N G +D+ EL F G ++ +D LM D G G
Sbjct: 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSG 396
Query: 126 TILFDDFIHCCVMLNLLTT------SFSQHDEDKDGVVT 158
+I + +FI + +L + +F D+D G ++
Sbjct: 397 SIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKIS 435
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 73 VTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + ++ F + D DNSG + E+ L GY+ + +++ D + G I + DF
Sbjct: 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDF 115
Query: 133 IHCCV 137
+ +
Sbjct: 116 LAATI 120
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 3 MP--PPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQ 60
MP P EF++ FQ D+D +G+I EL+ L++ K N E L+ G+ K+ G
Sbjct: 71 MPGDPEEFVKG-FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKD--GM 127
Query: 61 ISFEDF 66
+++ DF
Sbjct: 128 VNYHDF 133
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 80 FKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCV 137
F+ FDKD +G I EL+ L + G +L + +D L+K G + + DF+ +
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 18/106 (16%)
Query: 49 MIGMFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTA--- 99
+ FD TG + FEDF + + F +D + G I+K E+
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 117
Query: 100 ----LGTFGYR-LGDNT----VDILMKKFDHHGKGTILFDDFIHCC 136
+G + Y L ++T VD+ +K D + G + D+F+ C
Sbjct: 118 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 163
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 77 QSCFKSFDKD-NSGNIDKLELKTALGTFGYRLGDNT--VDILMKKFDHHGKGTILFDDFI 133
Q +K F +D SG++ E K G F + GD + + + + FD +G GTI F +FI
Sbjct: 28 QEWYKGFLRDCPSGHLSMEEFKKIYGNF-FPYGDASKFAEHVFRTFDANGDGTIDFREFI 86
Query: 134 HCCVMLNL------LTTSFSQHDEDKDGVVT 158
+ + L +FS +D D +G ++
Sbjct: 87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYIS 117
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 74 TDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDF 132
+ + FK FD + G I EL AL T G + + V +M + D G G I F +F
Sbjct: 9 AERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSN--GTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ F +D+DKSG I +EL++ L N + + + D + G+I ++F
Sbjct: 44 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEF 103
Query: 67 GALWK 71
AL K
Sbjct: 104 TALVK 108
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKF 119
F G K D + F D+D SG I++ ELK L F L D +K
Sbjct: 31 FAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAG 90
Query: 120 DHHGKGTILFDDF 132
D G G I D+F
Sbjct: 91 DSDGDGKIGVDEF 103
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
LR+ F+ D++ +G IST+ ++ L+ + ++E + MI D + +G + FE+F
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAE-LDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 71 KYVTDWQSCFKSF--DKDNSGNIDKLELKTALGTFGYRL--GDNTVDILMKKFDHHGKGT 126
K + + F+ F + + I K ELK + T G L G +T+D ++++ D +G G
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 127 ILFDDFI 133
+ F++F+
Sbjct: 62 VSFEEFL 68
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 24 ISTNELQMALSN-GTWKPFNAETVRLMIGMFDKNNTGQISFEDFGALWKYVT 74
IS EL++ + G T+ MI DKN G++SFE+F + K ++
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKIS 75
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++++F+ +D+D+SG I EL+ L + + N + ++ D ++ G+I ++F
Sbjct: 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEF 102
Query: 67 GAL 69
+
Sbjct: 103 AKM 105
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 71 KYVTDWQ--SCFKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKFDHHGKG 125
K TD Q F+ DKD SG I++ ELK L F G L D L+ D G
Sbjct: 36 KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDG 95
Query: 126 TILFDDFIHCCVM 138
I D+F
Sbjct: 96 KIGADEFAKMVAQ 108
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 58 TGQISFEDFGALWKYVTDWQS-------CFKSFDKDNSGNIDKLELKTALGTFGYRLGDN 110
+GQ++ EDF ++K + S F FDKDN+G I E T L T +
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99
Query: 111 TVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDK 153
+ + +D + G I FD+ + + + S +ED+
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 75 DWQSCFKSFDKD-NSGNIDKLELKTALGTFGYRLGDNT--VDILMKKFDHHGKGTILFDD 131
+ QS ++ F + +G +D+ K F + GD T L FD G G I F+D
Sbjct: 92 ELQSLYRGFKNECPTGLVDEDTFKLIYSQF-FPQGDATTYAHFLFNAFDADGNGAIHFED 150
Query: 132 FIHCCVML------NLLTTSFSQHDEDKDGVVTLHYEQFLSMVFSL 171
F+ +L L +F+ +D +KDG +T E+ L+++ S+
Sbjct: 151 FVVGLSILLRGTVHEKLKWAFNLYDINKDGCIT--KEEMLAIMKSI 194
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 24/109 (22%)
Query: 49 MIGMFDKNNTGQISFEDF---------GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTA 99
+ FD + G I FEDF G + + + W F +D + G I K E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLK-W--AFNLYDINKDGCITKEEMLAI 190
Query: 100 LGTFGYRLGDNTVDIL------------MKKFDHHGKGTILFDDFIHCC 136
+ + +G +T IL +K D + G + D+F+ C
Sbjct: 191 MKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETC 239
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMAL---SNGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
++D+F+ +D D+SG + EL+ L +G + +ET LM D + G+I E+
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAA-DNDGDGKIGAEE 102
Query: 66 F 66
F
Sbjct: 103 F 103
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 79 CFKSFDKDNSGNIDKLELKTALGTF--GYR-LGDNTVDILMKKFDHHGKGTILFDDF 132
F+ D D SG +D+ ELK L F G R L ++ LM D+ G G I ++F
Sbjct: 47 VFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 45 TVRLMIGMFDKNNTGQISFEDFG----ALWKYVTDWQSCFKSFDKDNSGNIDKLELKTAL 100
V+ ++GM DKN GQI+ ++F AL + F D + +G + EL TA+
Sbjct: 103 VVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAV 162
Query: 101 GTF 103
F
Sbjct: 163 RDF 165
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 75 DWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIH 134
+++ F+ FDKDN + EL T + G + ++K +D G FD
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGK--FDQETF 72
Query: 135 CCVML 139
+ML
Sbjct: 73 LTIML 77
Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+N +++ E+ G + + + K +DKDNSG D+ T + +G
Sbjct: 22 LFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYGQ 81
Query: 106 RL 107
+
Sbjct: 82 EV 83
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 54 DKNNTGQISFEDFGAL------WKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF-GYR 106
D N G +S+E+ A K Q FKS D D +G ID+ E G+ G
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQD 69
Query: 107 LGDNTV--DILMKKFDHHGKGTILFDDFIHCCVM--LNLLTTSFSQHDEDKDGVVTLHYE 162
L D+ + +L K D G G + ++ + + + D + DG +TL E
Sbjct: 70 LSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITL--E 127
Query: 163 QFLSMVFSL 171
+FL FSL
Sbjct: 128 EFLE--FSL 134
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 54 DKNNTGQISFEDFGAL------WKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF-GYR 106
D N G +S+E+ A K Q FKS D D +G ID+ E G+ G
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQD 69
Query: 107 LGDNTV--DILMKKFDHHGKGTILFDDFIHCCVM--LNLLTTSFSQHDEDKDGVVTLHYE 162
L D+ + +L K D G G + ++ + + + D + DG +TL E
Sbjct: 70 LSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITL--E 127
Query: 163 QFLSMVFSL 171
+FL FSL
Sbjct: 128 EFLE--FSL 134
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
L++IF+ +D D+SG I +EL+ L + A + + D + G+I E+F
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF--GYR-LGDNTVDILMKKF 119
F+ G K + + F+ D D SG I++ ELK L F G R L + +
Sbjct: 30 FQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAA 89
Query: 120 DHHGKGTILFDDF 132
DH G G I ++F
Sbjct: 90 DHDGDGKIGAEEF 102
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMAL---SNGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
++ F +D+DKSG I +EL++ L S G +AET + + D + G I ++
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAET-KAFLKAGDSDGDGAIGVDE 102
Query: 66 FGALWK 71
+ AL K
Sbjct: 103 WAALVK 108
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF--GYR-LGDNTVDILMKKF 119
F G K D + F D+D SG I++ ELK L F G R L D +K
Sbjct: 31 FAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAG 90
Query: 120 DHHGKGTILFDD 131
D G G I D+
Sbjct: 91 DSDGDGAIGVDE 102
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 34/122 (27%)
Query: 49 MIGMFDKNNTGQISFEDF---------GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTA 99
+ FD ++ G +SFEDF G + + + +W F +D + G I K E+
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKL-NW--AFNLYDINKDGYITKEEM--- 160
Query: 100 LGTFGYRLGDNTVDILMKKFDHHGKGT--ILFDDFIHCCVMLNLLTTSFSQHDEDKDGVV 157
+DI+ +D GK T +L +D V T F + D++KDGVV
Sbjct: 161 ------------LDIMKAIYDMMGKCTYPVLKEDAPRQHV-----ETFFQKMDKNKDGVV 203
Query: 158 TL 159
T+
Sbjct: 204 TI 205
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS---NGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
++ F +D+DKSG I +EL++ L G +AET + + D + G I E+
Sbjct: 44 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET-KAFLKAGDSDGDGAIGVEE 102
Query: 66 FGALWK 71
+ AL K
Sbjct: 103 WVALVK 108
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF--GYR-LGDNTVDILMKKFDHHGKGTI 127
K D + F D+D SG I++ ELK L F G R L D +K D G G I
Sbjct: 39 KSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 98
Query: 128 LFDDFI 133
++++
Sbjct: 99 GVEEWV 104
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS---NGTWKPFNAETVRLMIGMFDKNNTGQISFED 65
++ F +D+DKSG I +EL++ L G +AET + + D + G I E+
Sbjct: 43 IKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET-KAFLKAGDSDGDGAIGVEE 101
Query: 66 FGALWK 71
+ AL K
Sbjct: 102 WVALVK 107
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF--GYR-LGDNTVDILMKKFDHHGKGTI 127
K D + F D+D SG I++ ELK L F G R L D +K D G G I
Sbjct: 38 KSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAI 97
Query: 128 LFDDFI 133
++++
Sbjct: 98 GVEEWV 103
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
Query: 13 FQRVDRDKSGLISTNELQMALSNGTWK--------PFNAET----VRLMIGMFDKNNTGQ 60
FQ D D +GLIS +E+ + + + +K P + +T V + M DKN GQ
Sbjct: 105 FQLYDLDNNGLISYDEM-LRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQ 163
Query: 61 ISFEDF 66
++ E+F
Sbjct: 164 LTLEEF 169
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 5 PPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFE 64
P F +F D DK+G I E ALS + N + + ++D +N G IS++
Sbjct: 61 PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI-WAFQLYDLDNNGLISYD 119
Query: 65 D 65
+
Sbjct: 120 E 120
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 6 PEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGM---------FDKN 56
PE L+ IF++ D++ G E L+ GM DKN
Sbjct: 4 PEELKGIFEKYDKEGDG--------QLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKN 55
Query: 57 NTGQISFEDFGALWKYVT 74
G++SFE+F L K ++
Sbjct: 56 GDGEVSFEEFQVLVKKIS 73
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 79 CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
F+ FD DNSG I +L+ G L + + ++ + D + I D+FI
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSN--GTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++ F +D+DKSG I +EL++ L N + + + D + G+I +++
Sbjct: 43 VKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEW 102
Query: 67 GALWK 71
AL K
Sbjct: 103 TALVK 107
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKF 119
F G K D + F D+D SG I++ ELK L F L D +K
Sbjct: 30 FAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAG 89
Query: 120 DHHGKGTILFDD 131
D G G I D+
Sbjct: 90 DSDGDGKIGVDE 101
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 9 LRDIFQRVDRDKSGLISTNELQ---MALS--NGTWKPFNAETVRLMIGMFDKNNTGQISF 63
L+ F+ D D +G I NEL MA+ NG E + L+ D NN G+++
Sbjct: 95 LKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTL 154
Query: 64 EDF-GALWKYVTDWQSCFKSFDKDN 87
E+F + K + +KSFD N
Sbjct: 155 EEFINGMAKDQDLLEIVYKSFDFSN 179
Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 16/110 (14%)
Query: 53 FDKNNTGQISFEDFGALWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALGTFGYR 106
FD N G + F +F A + + FK +D D +G+IDK EL
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQAL 125
Query: 107 LGDNT------VDILMKKFDHHGKGTILFDDFIHCCV----MLNLLTTSF 146
G T ++++ K D + G + ++FI+ +L ++ SF
Sbjct: 126 NGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSF 175
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 79 CFKSFDKDNSGNIDKLELKTALGTFGYR-LGDNTVDILMKKFDHHGKGTILFDDFIHCC 136
FK FD + G ID E K + G L D V+ MK+ D G G I +F+
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 79 CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVM 138
FK FD D +G I LK G L D + ++ + D G G + +F+
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKK 75
Query: 139 LNL 141
+L
Sbjct: 76 TSL 78
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 79 CFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDDFIHC 135
FK FD D +G I LK G L D + ++ + D G G + +F+
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
>pdb|2I7A|A Chain A, Domain Iv Of Human Calpain 13
Length = 174
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 41 FNAETVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFK 81
F+ + R ++ + + G++ E+F LWK + +Q F+
Sbjct: 43 FSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQ 83
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G I+ +++ A K D ++ F+ D DNSG++D E+ F Y
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGFWY 180
Query: 106 RL 107
L
Sbjct: 181 TL 182
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 18/105 (17%)
Query: 49 MIGMFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLE------- 95
+ FD TG + FEDF + + F +D + G I+K E
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKA 120
Query: 96 LKTALGTFGYR-LGDNT----VDILMKKFDHHGKGTILFDDFIHC 135
+ +G + Y L ++T VD+ +K D + G + D+F+
Sbjct: 121 IYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 165
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G I+ +++ A K D ++ F+ D DNSG++D E+ F Y
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGFWY 180
Query: 106 RL 107
L
Sbjct: 181 TL 182
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G I+ +++ A K D ++ F+ D DNSG++D E+ F Y
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMTRQHLGFWY 180
Query: 106 RL 107
L
Sbjct: 181 TL 182
>pdb|3DLJ|A Chain A, Crystal Structure Of Human Carnosine Dipeptidase 1
pdb|3DLJ|B Chain B, Crystal Structure Of Human Carnosine Dipeptidase 1
Length = 485
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 4 PPPEFLRDIFQRVDRDKSGLISTNELQMALSNGTWKP---FNAETVRLM 49
PPP L +FQ +D + + T + +A+ + + +P F E R+M
Sbjct: 8 PPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMM 56
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 96 LKTALGTF-GYRLGDNTVDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSF 146
L+T L +F + + VD +MK+ D +G G + F +F+ L + +F
Sbjct: 37 LQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVACNNF 88
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 49 MIGMFDKNNTGQISFEDF-GALWKYVTDWQS------CFKSFDKDNSGNIDKLELKTALG 101
MI D + G I F +F + + + D S F+ FDKD +G I EL+ +
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 102 TFG 104
G
Sbjct: 66 NLG 68
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQIS 62
L+D+ VD D +G I E ++ + E +R +FDK+ G IS
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYIS 56
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 26/158 (16%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E ++ F +D++ G+I ++L+ + E + MI K +G I+F F
Sbjct: 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVF 80
Query: 67 ---------GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMK 117
GA + V FK D D G+I K L+ L T G R + +
Sbjct: 81 LTMFGEKLKGADPEDVI--MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 138
Query: 118 KFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDG 155
F G + D+ + C ++ H ED +G
Sbjct: 139 AFPPDVAGNV---DYKNICYVIT--------HGEDAEG 165
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ D L + +T ++ + FD +N G ID + LK + +LG + MKK
Sbjct: 39 YSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM----EKLGVPKTHLEMKKMISE 94
Query: 123 GKG----TILFDDFIH 134
G TI + DF++
Sbjct: 95 VTGGVSDTISYRDFVN 110
>pdb|3RF0|A Chain A, Crystal Structure Of Exopolyphosphatase From Yersinia
Pestis
pdb|3RF0|B Chain B, Crystal Structure Of Exopolyphosphatase From Yersinia
Pestis
Length = 209
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 45 TVRLMIGMFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNI 91
T+R G +N+ Q+ FE A W V W+ + + D + +
Sbjct: 159 TLRFPHGYLTQNSLVQLDFEREQAYWDDVVGWKLVIEEEEPDEAAKV 205
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 63 FEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHH 122
+ D L + +T ++ + FD +N G ID + LK + +LG + MKK
Sbjct: 39 YSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMM----EKLGVPKTHLEMKKMISE 94
Query: 123 GKG----TILFDDFIH 134
G TI + DF++
Sbjct: 95 VTGGVSDTISYRDFVN 110
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G I+ +++ A K D ++ F+ D DN+G++D E+ F Y
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLGFWY 180
Query: 106 RL 107
L
Sbjct: 181 TL 182
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 80 FKSFDKDNSGNIDKLELKTALGTF---GYRLGDNTVDILMKKFDHHGKGTILFDDF 132
F+ D D SG +D ELK L F L ++ LM D+ G G I D+F
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALS--NGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
++DIF+ +D D+SG + +EL+ L + + ++ D + G+I ++F
Sbjct: 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 52 MFDKNNTGQISFEDFGALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNT 111
M + + G++S+ A+ + + F+ D +++G + + E + G+ +
Sbjct: 166 MVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFD-KKSV 224
Query: 112 VDILMKKFDHHGKGTILFDDFIHCCVMLNLLTTSFSQHDEDKDGVVT 158
D L + D + F +++H + L +L ++ D DK G ++
Sbjct: 225 QDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLS 271
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
LR ++ D DKSG +S E+Q L + + + D +++ +S+++F
Sbjct: 255 LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEF 312
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
L DIF+ +D++ G + EL +G K E + +FD
Sbjct: 65 LTDIFRHIDKNGDGQLDRQEL----IDGYSKLSGEE-----VAVFD-------------- 101
Query: 69 LWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTIL 128
L + ++ + + D D +G ID E T L + ++ +KFD G G I
Sbjct: 102 LPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS 161
Query: 129 FDDFIHCCVMLNLLTTSFSQH----DEDKDGVVTLHYEQFLSMVFSL 171
D+ + +L + ++ + D + DG V +E+F M+ L
Sbjct: 162 VDELASVFGLDHLESKTWKEMISGIDSNNDGDV--DFEEFCKMIQKL 206
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 56 LDKNGDGEVSFEEFQVLVKKIS 77
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 52 MFDKNNTGQISFEDF------GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G IS +++ + D + FK D DNSG +D E+ F Y
Sbjct: 124 IFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLGFWY 183
Query: 106 RLGDNT 111
L N
Sbjct: 184 TLDPNA 189
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 73 VTDW-QSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTILFDD 131
+ +W ++ F FDKD SG+I E KT G G D + K D G + D+
Sbjct: 114 IRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 18/142 (12%)
Query: 7 EFLRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDF 66
E ++ F +D++ G+I ++L+ + E + MI K +G I+F F
Sbjct: 7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMI----KEASGPINFTVF 62
Query: 67 ---------GALWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMK 117
GA + V FK D D G+I K L+ L T G R + +
Sbjct: 63 LTMFGEKLKGADPEDVI--MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 120
Query: 118 KFDHHGKGTILFDDFIHCCVML 139
F G + D+ + C ++
Sbjct: 121 AFPPDVAGNV---DYKNICYVI 139
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 9 LRDIFQRVDRDKSGLISTNELQMALSNGTWKPFNAETVRLMIGMFDKNNTGQISFEDFGA 68
L DIF+ +D++ G + EL +G K E + +FD
Sbjct: 348 LTDIFRHIDKNGDGQLDRQEL----IDGYSKLSGEE-----VAVFD-------------- 384
Query: 69 LWKYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGTIL 128
L + ++ + + D D +G ID E T L + ++ +KFD G G I
Sbjct: 385 LPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS 444
Query: 129 FDDFIHCCVMLNLLTTSFSQH----DEDKDGVVTLHYEQFLSMVFSL 171
D+ + +L + ++ + D + DG V +E+F M+ L
Sbjct: 445 VDELASVFGLDHLESKTWKEMISGIDSNNDGDVD--FEEFCKMIQKL 489
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 71 KYVTDWQSCFKSFDKDNSGNIDKLELKTALGTFGYRLGDNTVDILMKKFDHHGKGT---I 127
+ + + + F D+D G I +LK + G D+ ++ ++K+ T
Sbjct: 13 RQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLT 72
Query: 128 LFDDFIHCCVMLNLLTTSFSQHDEDKDGVVTLHY 161
LF + + + L +FS DED G + Y
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDY 106
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 52 MFDKNNTGQISFEDFGALWKYV------TDWQSCFKSFDKDNSGNIDKLELKTALGTFGY 105
+FDK+ +G I+ +++ A K D ++ F+ D D+SG++D E+ F Y
Sbjct: 121 IFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDEMTRQHLGFWY 180
Query: 106 RL 107
L
Sbjct: 181 TL 182
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 57 LDKNGDGEVSFEEFQVLVKKIS 78
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 53 LDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 45 TVRLMIGMFDKNNTGQISFEDFGALWKYVT 74
T+ + DKN G++SFE+F L K ++
Sbjct: 45 TLDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 32/124 (25%)
Query: 40 PFNAET---VRLMIGMFDKNNTGQISFEDFGALWKYVT--------DWQSCFKSFDKDNS 88
P N E V M FD N I F ++ A V W FK +DKD +
Sbjct: 52 PDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW--TFKIYDKDRN 109
Query: 89 GNIDKLELKTALGTFGYRLG------------------DNTVDILMKKFDHHGKGTILFD 130
G ID+ EL + + Y+L + VD + D +G G + +
Sbjct: 110 GCIDRQELLDIVESI-YKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLN 168
Query: 131 DFIH 134
+F+
Sbjct: 169 EFVE 172
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 54 LDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 53 LDKNGDGEVSFEEFQVLVKKIS 74
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 54 LDKNGDGEVSFEEFQVLVKKIS 75
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 105 YRLGDNTVDILMKKFDHHGKGTILF 129
YR V+ L+ ++D +G+G ILF
Sbjct: 158 YRFAHTNVESLVNEYDDNGEGIILF 182
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 54 LDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 54 LDKNGDGEVSFEEFQVLVKKIS 75
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 53 FDKNNTGQISFEDFGALWKYVT 74
DKN G++SFE+F L K ++
Sbjct: 53 LDKNGDGEVSFEEFQVLVKKIS 74
>pdb|2H8L|A Chain A, Crystal Structure Of The Bb' Fragment Of Erp57
pdb|2H8L|B Chain B, Crystal Structure Of The Bb' Fragment Of Erp57
pdb|2H8L|C Chain C, Crystal Structure Of The Bb' Fragment Of Erp57
Length = 252
Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 105 YRLGDNTVDILMKKFDHHGKGTILF 129
YR V+ L+ ++D +G+G ILF
Sbjct: 54 YRFAHTNVESLVNEYDDNGEGIILF 78
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 40 PFNAET--VRLMIGMFDKNNTGQISFEDFGALWKYVT------DWQSCFKSFDKDNSGNI 91
PF T + +FD+N G+I F +F + + FK +D DN G I
Sbjct: 57 PFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYI 116
Query: 92 DKLELKTALGTFGYRLGDNTVDI 114
+ E+ + Y++ NTV++
Sbjct: 117 TRNEMLDIVDAI-YQMVGNTVEL 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,659,688
Number of Sequences: 62578
Number of extensions: 239810
Number of successful extensions: 1142
Number of sequences better than 100.0: 291
Number of HSP's better than 100.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 542
length of query: 173
length of database: 14,973,337
effective HSP length: 92
effective length of query: 81
effective length of database: 9,216,161
effective search space: 746509041
effective search space used: 746509041
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 48 (23.1 bits)