RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10832
(90 letters)
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 130 bits (328), Expect = 7e-39
Identities = 59/89 (66%), Positives = 72/89 (80%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
MV+EMVDGEPP+F++ P+QAM+R+RD PPPKLKN+HKVSP L+ FLER+LVRDP +RATA
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATA 289
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSRHSN 89
ELL HPFL Q G P LVPL++ R
Sbjct: 290 QELLDHPFLLQTGLPECLVPLIQLYRKQT 318
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 127 bits (321), Expect = 4e-38
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
M +EM++GEPP+ NE PL+A+ I P+L+N K+S + FL R L D +R +A
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSA 264
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSRHS 88
ELLQH FL+ A P + L PL+ ++ +
Sbjct: 265 KELLQHQFLKIAKPLSSLTPLIAAAKEA 292
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 110 bits (278), Expect = 2e-31
Identities = 31/87 (35%), Positives = 50/87 (57%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
+EM +G+PP+ + P++A+ I PPP + S F+++ LV+ P QRATA
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA 273
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSRH 87
+LLQHPF+R A ++L L+ +
Sbjct: 274 TQLLQHPFVRSAKGVSILRDLINEAMD 300
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 106 bits (267), Expect = 5e-30
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
++EM EPP P++ + +I PP L K S + FL+ L ++P R +A
Sbjct: 211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSA 270
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSR 86
A+LL+HPF+ L L+ ++
Sbjct: 271 AQLLEHPFVSSITSNKALRELVAEAK 296
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 102 bits (256), Expect = 5e-28
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
+E+ + +PP FN + A+ I P L++ S + F++ L + P R T+
Sbjct: 242 TCIELAERKPPLFNMNAMSALYHIAQNESPALQSG-HWSEYFRNFVDSCLQKIPQDRPTS 300
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSR 86
LL+H F+ + PP +++ L++ ++
Sbjct: 301 EVLLKHRFVLRERPPTVIMDLIQRTK 326
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 100 bits (252), Expect = 1e-27
Identities = 18/86 (20%), Positives = 34/86 (39%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
M++ M++G P+ +I PPP + +P ++ L ++P+ RA+A
Sbjct: 245 MMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASA 304
Query: 61 AELLQHPFLRQAGPPALLVPLMKGSR 86
EL + L P +
Sbjct: 305 MELRRKVGKALQEVGGLKSPWKGEYK 330
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 92.1 bits (229), Expect = 3e-24
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
+EM +G PP + P++A+ I P P+LK+ K S + Q F+E LV++ QR
Sbjct: 223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS-KKWSKKFQSFIESCLVKNHSQRPAT 281
Query: 61 AELLQHPFLRQAGPPALLVPLMK 83
+L++HPF+R + +K
Sbjct: 282 EQLMKHPFIRDQPNERQVRIQLK 304
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 90.9 bits (226), Expect = 5e-24
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKN-------THKVSPRLQGFLERLLVRD 53
+E+ G P+ PP++ + PP L+ K + + L +D
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKD 275
Query: 54 PLQRATAAELLQHPFLRQAGPPALLV 79
P +R TAAELL+H F ++A L
Sbjct: 276 PEKRPTAAELLRHKFFQKAKNKEFLQ 301
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 89.3 bits (222), Expect = 2e-23
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
+E+ GEPP P++ + I PP L+ S L+ F+E L ++P R TA
Sbjct: 208 TAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG--NYSKPLKEFVEACLNKEPSFRPTA 265
Query: 61 AELLQHPFL-RQAGPPALLVPLMK 83
ELL+H F+ R A + L L+
Sbjct: 266 KELLKHKFILRNAKKTSYLTELID 289
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 78.2 bits (193), Expect = 3e-19
Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
++EM E P+ + R + P P ++ +E + ++ +R
Sbjct: 218 CMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD--KVAIPEVKEIIEGCIRQNKDERY 275
Query: 59 TAAELLQHPFLRQ 71
+ +LL H F ++
Sbjct: 276 SIKDLLNHAFFQE 288
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 77.3 bits (191), Expect = 6e-19
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 2 VVEMVDGEPPFFN-EPPLQAMRRI---RDMPP-PKLKNTHKVSPRLQGFLERLLVRDPLQ 56
++EM G+PPF+ P AM ++ + P P+ +S + F+ + DP +
Sbjct: 215 IIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE-----SMSAEAKAFILKCFEPDPDK 269
Query: 57 RATAAELLQHPFLRQAGPPALLVP 80
RA A +LL FL+ + P
Sbjct: 270 RACANDLLVDEFLKVSSKKKKTQP 293
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 75.1 bits (185), Expect = 5e-18
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 3 VEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
VE+ G+ P+ N + + + ++ PP L S Q F++ L +D +R
Sbjct: 220 VELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYN 279
Query: 62 ELLQHPFLRQAGPP 75
+LL+H F+++
Sbjct: 280 KLLEHSFIKRYETL 293
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 75.3 bits (185), Expect = 6e-18
Identities = 26/128 (20%), Positives = 40/128 (31%), Gaps = 45/128 (35%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTH------------------------ 36
E+ +G PF + P Q + + P L +T
Sbjct: 226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSL 285
Query: 37 -------------------KVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA- 76
SP F+E+ L R+P R +A+ LL H F +Q A
Sbjct: 286 TTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345
Query: 77 -LLVPLMK 83
L L++
Sbjct: 346 EALPELLR 353
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 74.7 bits (184), Expect = 8e-18
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 3 VEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKV--SPRLQGFLERLLVRDPLQRAT 59
E+ G P+ + ++ PP+L N+ + SP F+ L +D +R
Sbjct: 220 YELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK 279
Query: 60 AAELLQHPFLRQA 72
ELL+HPF+
Sbjct: 280 YKELLKHPFILMY 292
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 72.0 bits (177), Expect = 7e-17
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
VV EP N IR P++ +S L+ ++ DP +R +A
Sbjct: 221 VVCAAGAEPLPRNGDQ---WHEIRQGRLPRI--PQVLSQEFTELLKVMIHPDPERRPSAM 275
Query: 62 ELLQHPFLRQAG 73
L++H L A
Sbjct: 276 ALVKHSVLLSAS 287
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 71.5 bits (176), Expect = 8e-17
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
++E+ P+ + P Q ++++ + P P+L K S F + L ++ +R T
Sbjct: 202 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPT 260
Query: 60 AAELLQHPFLRQA 72
EL+QHPF
Sbjct: 261 YPELMQHPFFTLH 273
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 70.1 bits (172), Expect = 4e-16
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 1 MVVEMVDGEPPFFN-EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
++E+ P+ + P Q ++++ + P P+L K S F + L ++ +R T
Sbjct: 246 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA-DKFSAEFVDFTSQCLKKNSKERPT 304
Query: 60 AAELLQHPFLRQA 72
EL+QHPF
Sbjct: 305 YPELMQHPFFTLH 317
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 68.1 bits (167), Expect = 2e-15
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
++E+ Q +R+ P T +S L+ L +L DP RATA
Sbjct: 245 ILEVACNMELPHGGEGWQQLRQGYLPPEF----TAGLSSELRSVLVMMLEPDPKLRATAE 300
Query: 62 ELLQHPFLRQ 71
LL P LRQ
Sbjct: 301 ALLALPVLRQ 310
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 67.4 bits (165), Expect = 4e-15
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
++ M G+ PF + + I D P +++ LQ L+ L RDP QR +
Sbjct: 209 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 267
Query: 60 AAELLQHPFLRQAGPP 75
ELL HP+++ P
Sbjct: 268 IPELLAHPYVQIQTHP 283
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 66.0 bits (161), Expect = 1e-14
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
++ M G+ PF + + I D P +++ LQ L+ L RDP QR +
Sbjct: 256 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 314
Query: 60 AAELLQHPFLRQAGPP 75
ELL HP+++ P
Sbjct: 315 IPELLAHPYVQIQTHP 330
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 65.4 bits (160), Expect = 1e-14
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 1 MVVEMVDGEPPFFNEP-PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
++ M G+ PF + + I D P +++ LQ L+ L RDP QR +
Sbjct: 228 ILYYMTYGKTPFQQIINQISKLHAIID-PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS 286
Query: 60 AAELLQHPFLRQAGPP 75
ELL HP+++ P
Sbjct: 287 IPELLAHPYVQIQTHP 302
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 61.6 bits (150), Expect = 5e-13
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
E+ + F + +I P + S L+ + +L R+P R + +
Sbjct: 217 ELCTLKHAFEAGSMKNLVLKIISGSFPPVSL--HYSYDLRSLVSQLFKRNPRDRPSVNSI 274
Query: 64 LQHPFLRQ 71
L+ F+ +
Sbjct: 275 LEKGFIAK 282
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 58.4 bits (142), Expect = 5e-12
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
E+ PPF + +IR+ ++ + S L + R+L R + E+
Sbjct: 208 ELCALMPPFTAFSQKELAGKIREGKFRRIPY--RYSDELNEIITRMLNLKDYHRPSVEEI 265
Query: 64 LQHPFLRQ 71
L++P + +
Sbjct: 266 LENPLILE 273
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 58.6 bits (142), Expect = 6e-12
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 5 MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
+ +G PF QA + L + +E+++ DP +R +A +L
Sbjct: 223 ISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282
Query: 65 QHPFLRQA 72
+HPF
Sbjct: 283 KHPFFWSL 290
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 56.5 bits (137), Expect = 3e-11
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 4 EMVDGEPPFFNEP--PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
EM + PF+ + ++I P L + H S L+ + + DP +R
Sbjct: 228 EMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH-YSEELRQLVNMCINPDPEKRPDVT 286
Query: 62 ELLQHPFLRQA 72
+ A
Sbjct: 287 YVYDVAKRMHA 297
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 56.0 bits (135), Expect = 5e-11
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF + ++ P +SP + L LL R+ +R A
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLCFENPNYNV---LSPLARDLLSNLLNRNVDERFDAMRA 328
Query: 64 LQHPFLRQAG 73
LQHP++ Q
Sbjct: 329 LQHPWISQFS 338
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 55.8 bits (135), Expect = 6e-11
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 5/77 (6%)
Query: 10 PPFFNEPPLQAMRRIRD---MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
P + ++++R PP + + + L+ DP +R A LL
Sbjct: 227 PFSTGMERVNILKKLRSVSIEFPPDFDD--NKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
Query: 67 PFLRQAGPPALLVPLMK 83
+L ++ +K
Sbjct: 285 GWLPVKHQDEVIKEALK 301
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 55.4 bits (134), Expect = 6e-11
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
E++ F +RD + + L++LL + P R +E+
Sbjct: 213 ELLHVCDTAFETSKF--FTDLRDGIISD-----IFDKKEKTLLQKLLSKKPEDRPNTSEI 265
Query: 64 LQHPFLRQAGP 74
L+ + + P
Sbjct: 266 LRTLTVWKKSP 276
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 55.3 bits (134), Expect = 7e-11
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF++E + +I+ D P P+ V+P + ++ +L +P +R TA +
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT---VTPEAKSLIDSMLTVNPKKRITADQA 259
Query: 64 LQHPFLRQAGPPALLVPL 81
L+ P++ A +
Sbjct: 260 LKVPWICNRERVASAIHR 277
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 55.5 bits (134), Expect = 8e-11
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 17/91 (18%)
Query: 4 EMVDGEPPFFNEPPLQAM-RRIR----DMPPPKLKNTHK------------VSPRLQGFL 46
M PF + L + IR + P + + +S FL
Sbjct: 244 VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFL 303
Query: 47 ERLLVRDPLQRATAAELLQHPFLRQAGPPAL 77
+ L ++P +R T+ + L+H +L L
Sbjct: 304 KLFLRKNPAERITSEDALKHEWLADTNIEDL 334
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 54.9 bits (133), Expect = 9e-11
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 11/80 (13%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
E + G+PPF + +RI P V+ + + RLL +P QR
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRVEFTFPD-------FVTEGARDLISRLLKHNPSQRPM 251
Query: 60 AAELLQHPFLRQAGPPALLV 79
E+L+HP++
Sbjct: 252 LREVLEHPWITANSSKPSNC 271
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 54.6 bits (131), Expect = 2e-10
Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 7/71 (9%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
+ + P + L I ++ + ++ LE L R +
Sbjct: 305 WIWCADLPITKDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 357
Query: 64 LQHPFLRQAGP 74
++ P Q
Sbjct: 358 METPEYEQLRT 368
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 54.2 bits (131), Expect = 2e-10
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 8 GEPPFFNE-PPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
G PPF + +I + P VS + +++LLV DP R T E
Sbjct: 215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTEE 271
Query: 63 LLQHPFLRQAGPPALLVPLMKGSRHSN 89
L+HP+L+ L+ S
Sbjct: 272 ALRHPWLQDEDMKRKFQDLLSEENEST 298
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 53.9 bits (130), Expect = 2e-10
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF+ + ++R+ P+ + +S + + ++L P R TA +
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLPQWRT---ISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 64 LQHPFLRQAGPPALLVP 80
L+HP++++ +
Sbjct: 275 LEHPWIQKYSSETPTIS 291
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 53.9 bits (130), Expect = 3e-10
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF + + +R++ P+ KN VS + ++++L D +R +A +
Sbjct: 233 GYPPFGGQTDQEILRKVEKGKYTFDSPEWKN---VSEGAKDLIKQMLQFDSQRRISAQQA 289
Query: 64 LQHPFLRQAG 73
L+HP++++
Sbjct: 290 LEHPWIKEMC 299
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 53.4 bits (129), Expect = 4e-10
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
E + G PPF + + RRI ++ LK +S + + +LL P QR +
Sbjct: 204 EFLVGMPPFDSPSHTETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGV 260
Query: 64 LQHPFLRQAGPPAL 77
++HP+++ L
Sbjct: 261 MEHPWVKANSRRVL 274
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 53.2 bits (128), Expect = 4e-10
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF ++++ P+ K VS + + ++L P R +A +
Sbjct: 223 GCPPFNGANEYDILKKVEKGKYTFELPQWKK---VSESAKDLIRKMLTYVPSMRISARDA 279
Query: 64 LQHPFLRQA 72
L H +++
Sbjct: 280 LDHEWIQTY 288
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 52.6 bits (127), Expect = 6e-10
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF + M +IR P N VSP+ + + RLL + P QR T+ +
Sbjct: 203 GYPPFSAPTDSEVMLKIREGTFTFPEKDWLN---VSPQAESLIRRLLTKSPKQRITSLQA 259
Query: 64 LQHPFLRQAGP 74
L+H + +
Sbjct: 260 LEHEWFEKQLS 270
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 52.8 bits (127), Expect = 7e-10
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 8 GEPPFFNE-PPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
G PPF + +I + P VS + +++LLV DP R T E
Sbjct: 340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE---VSEKALDLVKKLLVVDPKARFTTEE 396
Query: 63 LLQHPFLRQAGPPALLVPLMK 83
L+HP+L+ L+
Sbjct: 397 ALRHPWLQDEDMKRKFQDLLS 417
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 52.4 bits (126), Expect = 8e-10
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF + ++++ KN +S + ++ +L D +R TA E
Sbjct: 243 GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN---ISDEAKELIKLMLTYDYNKRCTAEEA 299
Query: 64 LQHPFLRQAGPPA 76
L ++++
Sbjct: 300 LNSRWIKKYANNI 312
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 52.7 bits (126), Expect = 8e-10
Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 6/74 (8%)
Query: 4 EMVDGEPPFFNEPPLQ------AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR 57
+ PF P R+ + + ++ + R L D +R
Sbjct: 285 RVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRR 344
Query: 58 ATAAELLQHPFLRQ 71
E ++ P Q
Sbjct: 345 LLPLEAMETPEFLQ 358
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 51.9 bits (125), Expect = 1e-09
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF++ + +R I P+ + S ++ + R LV P +R TA E
Sbjct: 225 GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD---YSDTVKDLVSRFLVVQPQKRYTAEEA 281
Query: 64 LQHPFLRQAGPP 75
L HPF +Q
Sbjct: 282 LAHPFFQQYVVE 293
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 51.5 bits (124), Expect = 2e-09
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF++E + +I+ D P P+ V+P + ++ +L +P +R TA +
Sbjct: 226 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT---VTPEAKSLIDSMLTVNPKKRITADQA 282
Query: 64 LQHPFLRQAGPPA 76
L+ P++ A
Sbjct: 283 LKVPWICNRERVA 295
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 51.1 bits (123), Expect = 2e-09
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF + + + + + N S + F+ RLLV+DP +R T +
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSN---TSALAKDFIRRLLVKDPKKRMTIQDS 269
Query: 64 LQHPFLRQAGPPALLVPLMKGSRHSN 89
LQHP+++ L
Sbjct: 270 LQHPWIKPKDTQQALSRKASAVNMEK 295
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 51.2 bits (123), Expect = 3e-09
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF + + + I D+ + ++ +S + F+ +LL+++ R +A+E
Sbjct: 284 GLSPFLGDNDAETLNNILACRWDLEDEEFQD---ISEEAKEFISKLLIKEKSWRISASEA 340
Query: 64 LQHPFLRQAGPPALLVPLMKGSRHSNC 90
L+HP+L + L K +R S+
Sbjct: 341 LKHPWLSDHKLHSRLSAQKKKNRGSDA 367
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 51.1 bits (123), Expect = 3e-09
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
PF E + I D + VS F++ LLV++P +R TA
Sbjct: 229 HTSPFVGEDNQETYLNISQVNVDYSEETFSS---VSQLATDFIQSLLVKNPEKRPTAEIC 285
Query: 64 LQHPFLRQAGPPALLVPL 81
L H +L+Q L P
Sbjct: 286 LSHSWLQQWDFENLFHPE 303
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 50.3 bits (121), Expect = 4e-09
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF+ + ++R+ P+ + +S + + ++L P R TA +
Sbjct: 218 GTPPFYGKNEYDILKRVETGKYAFDLPQWRT---ISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 64 LQHPFLRQ 71
L+HP++++
Sbjct: 275 LEHPWIQK 282
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 50.3 bits (121), Expect = 4e-09
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 8 GEPPFFNEPPLQAMRRIRDM-----PPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
G PF + ++ + ++P+ L+++L +DP +R +AA+
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECR-----PLTPQAVDLLKQMLTKDPERRPSAAQ 275
Query: 63 LLQHPFLRQA 72
+L H + +QA
Sbjct: 276 VLHHEWFKQA 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 50.6 bits (121), Expect = 4e-09
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 5 MVDGEPPFFNEPPLQA--MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
+ G+ PF ++ ++ +R I + K + + + +++ DPL+R TA +
Sbjct: 233 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292
Query: 63 LLQHPFLRQA 72
+L+HP
Sbjct: 293 VLRHPLFWPK 302
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 50.6 bits (121), Expect = 4e-09
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF E + +R ++ +M +S + F+ +LL+ DP R T +
Sbjct: 352 GLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISEDGKDFIRKLLLADPNTRMTIHQA 408
Query: 64 LQHPFLRQAGPPALLVPL 81
L+HP+L P +
Sbjct: 409 LEHPWLTPGNAPGRDSQI 426
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 50.0 bits (120), Expect = 5e-09
Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 10 PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
P ++ + +R++ P L + P ++ +L P++R A ++++
Sbjct: 226 PFSTQMERVRTLTDVRNLKFPPLFT--QKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283
Query: 70 RQAGPPA 76
P
Sbjct: 284 EDLDFPG 290
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 50.1 bits (120), Expect = 5e-09
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 22 RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
+ D+ K K + + + FL +L DP +RA A L+ HP+L+ +
Sbjct: 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 348
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 50.3 bits (121), Expect = 5e-09
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF E Q + I K +S F++RLLV++ R TA+E
Sbjct: 199 GINPFLAETNQQIIENIMNAEYTFDEEAFKE---ISIEAMDFVDRLLVKERKSRMTASEA 255
Query: 64 LQHPFLRQAGPP 75
LQHP+L+Q
Sbjct: 256 LQHPWLKQKIER 267
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 50.0 bits (120), Expect = 6e-09
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF++E + ++I+ D P P+ V+P + + ++L +P +R TAAE
Sbjct: 209 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT---VTPEAKDLINKMLTINPSKRITAAEA 265
Query: 64 LQHPFLRQAGPPA 76
L+HP++ A
Sbjct: 266 LKHPWISHRSTVA 278
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 49.6 bits (119), Expect = 8e-09
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF+ + I M P + + +S + + R+L+ DP +R T E
Sbjct: 229 GCLPFYGTKE-RLFEGIIKGKYKMNPRQWSH---ISESAKDLVRRMLMLDPAERITVYEA 284
Query: 64 LQHPFLRQAGPPALLVPL 81
L HP+L++ A + L
Sbjct: 285 LNHPWLKERDRYAYKIHL 302
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 49.5 bits (119), Expect = 8e-09
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 4 EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
++ G PPF + ++ ++ MP +S + + +LL R+P R
Sbjct: 204 TLLIGRPPF-DTDTVKNTLNKVVLADYEMPS-------FLSIEAKDLIHQLLRRNPADRL 255
Query: 59 TAAELLQHPFLRQAGPP 75
+ + +L HPF+ +
Sbjct: 256 SLSSVLDHPFMSRNSST 272
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 49.8 bits (119), Expect = 8e-09
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 17 PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQA 72
+ + I + PPPKL + S Q F+ + L+++P +RA +L+ H F++++
Sbjct: 277 IFELLDYIVNEPPPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 49.5 bits (119), Expect = 9e-09
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 13/82 (15%)
Query: 4 EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
++ G+PPF L+ RI+ +P ++P ++++L DP R
Sbjct: 207 TLLVGKPPF-ETSCLKETYLRIKKNEYSIPK-------HINPVAASLIQKMLQTDPTARP 258
Query: 59 TAAELLQHPFLRQAGPPALLVP 80
T ELL F PA L
Sbjct: 259 TINELLNDEFFTSGYIPARLPI 280
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 49.3 bits (118), Expect = 1e-08
Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF + + + I D S + F+ +LLV++ +R T E
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQ---TSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 64 LQHPFLRQAGPPALLVPLMKGSRHSN 89
L+HP++ +V N
Sbjct: 271 LRHPWITPVDTQQAMVRRESVVNLEN 296
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 49.2 bits (118), Expect = 1e-08
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 8 GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
G PPF++ L RIR + P P+ VS ++ + LL +P QR T
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE---VSEEVKMLIRNLLKTEPTQRMT 250
Query: 60 AAELLQHPFLRQAG 73
E + HP++ Q+
Sbjct: 251 ITEFMNHPWIMQST 264
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 49.2 bits (118), Expect = 1e-08
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF + + + I D + S + F+ +LLV++ +R T E
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSH---TSELAKDFIRKLLVKETRKRLTIQEA 270
Query: 64 LQHPFLRQAGPPALLVPLMKGSRHSN 89
L+HP++ +V N
Sbjct: 271 LRHPWITPVDNQQAMVRRESVVNLEN 296
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 48.6 bits (116), Expect = 2e-08
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF++ + +R I P+ + S ++ + RLL DP R TA +
Sbjct: 301 GSPPFWHRRQILMLRMIMEGQYQFSSPEWDD---RSSTVKDLISRLLQVDPEARLTAEQA 357
Query: 64 LQHPFLRQ 71
LQHPF +
Sbjct: 358 LQHPFFER 365
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 48.4 bits (116), Expect = 2e-08
Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 14/78 (17%)
Query: 8 GEPPFFNEP-------PLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQ 56
G+ PF + ++ M++I+ KN VS + ++ LL DP +
Sbjct: 205 GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN---VSQEAKDLIQGLLTVDPNK 261
Query: 57 RATAAELLQHPFLRQAGP 74
R + L + +L+
Sbjct: 262 RLKMSGLRYNEWLQDGSQ 279
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 47.6 bits (114), Expect = 4e-08
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PPF+ E + +I+ + P + +S + F+ LL +DP +R T +
Sbjct: 203 GYPPFYEETESKLFEKIKEGYYEFESPFWDD---ISESAKDFICHLLEKDPNERYTCEKA 259
Query: 64 LQHPFLRQAGPP 75
L HP++
Sbjct: 260 LSHPWIDGNTAL 271
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 47.7 bits (114), Expect = 4e-08
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 13/82 (15%)
Query: 4 EMVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRA 58
++ G+PPF L+ RI+ +P ++P ++++L DP R
Sbjct: 233 TLLVGKPPF-ETSCLKETYLRIKKNEYSIPK-------HINPVAASLIQKMLQTDPTARP 284
Query: 59 TAAELLQHPFLRQAGPPALLVP 80
T ELL F PA L
Sbjct: 285 TINELLNDEFFTSGYIPARLPI 306
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 47.6 bits (114), Expect = 4e-08
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF E + + I D N S + F+ RLLV+DP +R T A+
Sbjct: 207 GASPFLGETKQETLTNISAVNYDFDEEYFSN---TSELAKDFIRRLLVKDPKRRMTIAQS 263
Query: 64 LQHPFLRQAG 73
L+H +++
Sbjct: 264 LEHSWIKAIR 273
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 47.8 bits (114), Expect = 4e-08
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 8 GEPPFFNEPPLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
G PF E L+ ++ ++ + + VSP + F++ LL ++P +R T +
Sbjct: 246 GLSPFAGEDDLETLQNVKRCDWEFDEDAFSS---VSPEAKDFIKNLLQKEPRKRLTVHDA 302
Query: 64 LQHPFLRQAGP 74
L+HP+L+
Sbjct: 303 LEHPWLKGDHS 313
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 47.5 bits (114), Expect = 5e-08
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM+ G PF++ ++ +I + +L+ + ++ L RL+ RD QR
Sbjct: 195 EMLAGYTPFYDSNTMKTYEKILN---AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQN 251
Query: 59 TAAELLQHPF 68
++ HP+
Sbjct: 252 GTEDVKNHPW 261
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 47.3 bits (113), Expect = 5e-08
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 5 MVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
+V G PF + L+ + R+ +P +S + L+R LV +P++R T
Sbjct: 207 LVSGSLPF-DGQNLKELRERVLRGKYRIPF-------YMSTDCENLLKRFLVLNPIKRGT 258
Query: 60 AAELLQHPFLRQAGPPALLVPLM 82
++++ ++ L P +
Sbjct: 259 LEQIMKDRWINAGHEEDELKPFV 281
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 47.3 bits (113), Expect = 6e-08
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 8 GEPPFFNEP---PLQAMRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
G PF N P P + + RI + + VS + + ++L DP QR TA
Sbjct: 216 GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS---VSDTAKDLVSKMLHVDPHQRLTA 272
Query: 61 AELLQHPFLRQAG 73
A +L+HP++
Sbjct: 273 ALVLRHPWIVHWD 285
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 47.3 bits (113), Expect = 6e-08
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 8 GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
G PPF++ RRIR P P+ VS + + LL DP +R T
Sbjct: 225 GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE---VSEDAKQLIRLLLKTDPTERLT 281
Query: 60 AAELLQHPFLRQAG 73
+ + HP++ Q+
Sbjct: 282 ITQFMNHPWINQSM 295
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 47.4 bits (112), Expect = 6e-08
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
+ + P ++ L I ++ + ++ LE L R +
Sbjct: 309 WIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361
Query: 64 LQHPFLRQ 71
++ P Q
Sbjct: 362 METPEYEQ 369
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 47.1 bits (112), Expect = 8e-08
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Query: 4 EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDP--LQRAT 59
EM+ GE PF+ E ++ +I VS + + RL+ L +
Sbjct: 273 EMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG 332
Query: 60 AAELLQHPF--------LRQAGPP 75
+ +HPF +R P
Sbjct: 333 IEDFKKHPFFSGIDWDNIRNCEAP 356
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 46.9 bits (112), Expect = 9e-08
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 4 EMVDGEPPFFNEPPLQ-AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATAA 61
E++ GEPPF + P+ A + +R+ P P +S L + + L ++P R TAA
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
Query: 62 ELLQ 65
E+
Sbjct: 271 EMRA 274
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 46.8 bits (111), Expect = 9e-08
Identities = 8/50 (16%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 21 MRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
+ +R++ P L P+ ++ +L P +R A +++++
Sbjct: 283 ITDVRNLKFPLLFTQK--YPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 46.6 bits (111), Expect = 1e-07
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 8 GEPPFFNEPPLQA----MRRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
G PPF++ L RIR + P P+ VS ++ + LL +P QR T
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE---VSEEVKMLIRNLLKTEPTQRMT 315
Query: 60 AAELLQHPFLRQAG 73
E + HP++ Q+
Sbjct: 316 ITEFMNHPWIMQST 329
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 46.5 bits (111), Expect = 1e-07
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 4 EMVDGEPPFF---NEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-AT 59
E++ G P+ + + + + S + L++LL +P QR +
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVHTFETT---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQ 265
Query: 60 AAELLQHPFLR 70
+++ P++
Sbjct: 266 LSDVQNFPYMN 276
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 46.3 bits (110), Expect = 1e-07
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFLRQAGP 74
FL++ L DP R T + L+HP+LR+ P
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 46.1 bits (110), Expect = 1e-07
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM G PPFF + P+Q +I K++ S L+ L LL D +R
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVS---GKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKN 286
Query: 59 TAAELLQHPF 68
++ H +
Sbjct: 287 GVNDIKNHKW 296
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 46.0 bits (110), Expect = 2e-07
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMP---PPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
+M+ G PPF E + + +I PP L + + L++LL R+ R
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKCKLNLPPYL------TQEARDLLKKLLKRNAASRLGA 266
Query: 58 --ATAAELLQHPFLR 70
A E+ HPF R
Sbjct: 267 GPGDAGEVQAHPFFR 281
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 45.6 bits (109), Expect = 2e-07
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM+ G PF + + M I + +SP Q L L R+P R
Sbjct: 218 EMLTGTLPFQGKDRKETMTMIL-KAKLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPD 274
Query: 59 TAAELLQHPFLR 70
E+ +H F
Sbjct: 275 GVEEIKRHSFFS 286
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 45.6 bits (108), Expect = 2e-07
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 4 EMVDGEPPFFNEPPL---QAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
+++ G PF + R M ++ SP L+ LE LL RD +R
Sbjct: 383 KLLRGHSPFRQHKTKDKHEIDRMTLTMA---VELPDSFSPELRSLLEGLLQRDVNRRLGC 439
Query: 58 --ATAAELLQHPF 68
A E+ + PF
Sbjct: 440 LGRGAQEVKESPF 452
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 45.7 bits (109), Expect = 2e-07
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR---- 57
EM+ G PPF++ + I + P ++ + LE LL +D +R
Sbjct: 231 EMLYGLPPFYSRNTAEMYDNILNKPLQLKP-----NITNSARHLLEGLLQKDRTKRLGAK 285
Query: 58 ATAAELLQHPFLR 70
E+ H F
Sbjct: 286 DDFMEIKSHVFFS 298
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 45.3 bits (108), Expect = 2e-07
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 9/73 (12%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR------ 57
++V G PPF ++I + + K P+ + +E+LLV D +R
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKL---EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 280
Query: 58 ATAAELLQHPFLR 70
L HPF
Sbjct: 281 EGYGPLKAHPFFE 293
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 45.5 bits (108), Expect = 3e-07
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFLRQAGP 74
+ R+L DP R LQH F ++
Sbjct: 352 LILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 45.3 bits (108), Expect = 3e-07
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM+ G PF+N+ + I ++ +SP + L LL +DP QR +
Sbjct: 197 EMMCGRLPFYNQDHERLFELILMEE---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPS 253
Query: 59 TAAELLQHPFLR 70
A E+++H F
Sbjct: 254 DAKEVMEHRFFL 265
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 45.0 bits (107), Expect = 3e-07
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 8 GEPPFFNEPPLQAM-RRIR----DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAE 62
G PF++E Q M RRI P VS + + +L+V DP +R T +
Sbjct: 246 GFEPFYDERGDQFMFRRILNCEYYFISPWWDE---VSLNAKDLVRKLIVLDPKKRLTTFQ 302
Query: 63 LLQHPFLRQAGP 74
LQHP++
Sbjct: 303 ALQHPWVTGKAA 314
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 45.1 bits (107), Expect = 3e-07
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM+ G PF+N+ + I ++ + P + L LL +DP QR
Sbjct: 341 EMMCGRLPFYNQDHEKLFELILMEE---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 397
Query: 59 TAAELLQHPFLR 70
A E++QH F
Sbjct: 398 DAKEIMQHRFFA 409
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 45.2 bits (107), Expect = 3e-07
Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 12/76 (15%)
Query: 4 EMVDGEPPFFNEPPLQAM----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-- 57
EM+ PF +R+ + + K SP + F E LL +DP +R
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQA---VTYPDKFSPASKDFCEALLQKDPEKRLG 437
Query: 58 ---ATAAELLQHPFLR 70
+ L HP R
Sbjct: 438 FRDGSCDGLRTHPLFR 453
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 44.9 bits (106), Expect = 4e-07
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 22 RRIRDMPPPKLKNTHKVSPRLQG--------FLERLLVRDPLQRATAAELLQHPFLR 70
+ I + P L FL +L P +RATAAE L+HP+L
Sbjct: 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 45.0 bits (107), Expect = 4e-07
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 5 MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
MV G+ PF + + + P VSP + R L P R + E+L
Sbjct: 232 MVCGDIPFERD--QEILEAELHFPA-------HVSPDCCALIRRCLAPKPSSRPSLEEIL 282
Query: 65 QHPFLRQAGPPALLVP 80
P+++ L P
Sbjct: 283 LDPWMQTPAEDVPLNP 298
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 45.0 bits (107), Expect = 4e-07
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 8 GEPPFFNEPPLQA---------------MRRIR----DMPPPKLKNTHKVSPRLQGFLER 48
G PPF I+ + P + +S + + +
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAH---ISCAAKDLISK 278
Query: 49 LLVRDPLQRATAAELLQHPFLRQAGP 74
LLVRD QR +AA++LQHP+++ P
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQGCAP 304
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 44.8 bits (106), Expect = 4e-07
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 4 EMVDGEPPFFNEPPLQAM----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-- 57
EM+ G+ PF R ++++P + + + SP+ + +LL +DP +R
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERLVKEVP---EEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 58 ---ATAAELLQHPFLR 70
+A E+ +HP +
Sbjct: 434 CRGGSAREVKEHPLFK 449
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 44.5 bits (106), Expect = 5e-07
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR-ATA 60
EM+ G+ PF + + IR P P+ + + L +L VR+P +R
Sbjct: 210 EMLIGQSPFHGQDEEELFHSIRMDNPFYPR-----WLEKEAKDLLVKLFVREPEKRLGVR 264
Query: 61 AELLQHPFLR 70
++ QHP R
Sbjct: 265 GDIRQHPLFR 274
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 44.3 bits (105), Expect = 7e-07
Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 4 EMVDGEPPF---FNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
M+ GE P+ F + A+ + P+ + + S L L ++ DP QR
Sbjct: 238 AMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ---SPRHSSALWQLLNSMMTVDPHQRPHI 294
Query: 61 AELLQHPFLRQAGPP 75
LL Q P
Sbjct: 295 PLLLSQLEALQPPAP 309
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 44.3 bits (105), Expect = 7e-07
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 5 MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
MV G+ PF ++ + +R +VS Q + L P R T E+
Sbjct: 242 MVCGDIPFEHD--EEIIRGQVFFRQ-------RVSSECQHLIRWCLALRPSDRPTFEEIQ 292
Query: 65 QHPFLRQAGPPALLVPL 81
HP+++ P +
Sbjct: 293 NHPWMQDVLLPQETAEI 309
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 44.0 bits (104), Expect = 8e-07
Identities = 13/90 (14%), Positives = 31/90 (34%), Gaps = 9/90 (10%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
+ + PF + L+ + +PP + +L +P +R + AE+
Sbjct: 245 LLCFRQHPFEDGAKLRIVNGKYSIPPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEV 299
Query: 64 LQHPF----LRQAGPPALLVPLMKGSRHSN 89
+ R P + + L++ +
Sbjct: 300 VHQLQEIAAARNVNPKSPITELLEQNGGYG 329
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 43.9 bits (104), Expect = 8e-07
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 22 RRIRDMPPPK--LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
+ P K + +L + R+L DP QR T AE L HPF P
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 43.9 bits (104), Expect = 9e-07
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 14/85 (16%)
Query: 4 EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR---A 58
EM G+ PF+ + + +I V + F++RLL P R
Sbjct: 262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRG 320
Query: 59 TAAELLQHPF--------LRQAGPP 75
A + HPF LR + PP
Sbjct: 321 GAGDFRTHPFFFGLDWDGLRDSVPP 345
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 43.8 bits (104), Expect = 9e-07
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
P L L+ +L +P +R + ++ QH + R+ PPA
Sbjct: 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 43.8 bits (104), Expect = 1e-06
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 14/75 (18%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMP---PPKLKNTHKVSPRLQGFLERLLVRDPLQR--- 57
EM+ G+ PF E + + I + P + S + L+ + P +R
Sbjct: 213 EMLAGQAPFEGEDEDELFQSIMEHNVAYPKSM------SKEAVAICKGLMTKHPGKRLGC 266
Query: 58 --ATAAELLQHPFLR 70
++ +H F R
Sbjct: 267 GPEGERDIKEHAFFR 281
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 43.4 bits (103), Expect = 1e-06
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 4 EMVDGEPPFFNEPPLQ-AMRRIR-DMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATA 60
EM+ GEPPF E + A++ I+ +P + L + R +D R T
Sbjct: 204 EMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTI 263
Query: 61 AELLQ 65
E+
Sbjct: 264 QEMKD 268
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 43.0 bits (102), Expect = 2e-06
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
Query: 4 EMVDGEPPFFNEP----PLQAMRRIRDMPP--PKLKNTHKVSPRLQGFLERLLVRDPLQR 57
E++ G PF + + RRI P P+ ++S + ++RLL++DP +R
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ-----EMSALAKDLIQRLLMKDPKKR 308
Query: 58 -----ATAAELLQHPFLR 70
A E+ +H F +
Sbjct: 309 LGCGPRDADEIKEHLFFQ 326
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 43.0 bits (102), Expect = 2e-06
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 11 PFFNEPPLQAMRRIRDMPPPKLKNTH--KVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
FN+ P+ A R+ ++ + K+S + ++ L DP +R AELL H F
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
Query: 69 LRQAGPPALLVPLMK 83
+ G ++
Sbjct: 310 FQMDGFAERFSQELQ 324
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 43.1 bits (102), Expect = 2e-06
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 17 PLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
+ +++ ++ P H++ FL +L DP R + AELL+H FL
Sbjct: 310 SINSIKHVKKCLPLYKIIKHEL---FCDFLYSILQIDPTLRPSPAELLKHKFL 359
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 43.1 bits (101), Expect = 2e-06
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-----A 58
EM+ G+ PF E + + I + + +S + L+ + P +R
Sbjct: 534 EMLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPE 590
Query: 59 TAAELLQHPFLR 70
++ +H F R
Sbjct: 591 GERDIKEHAFFR 602
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 42.8 bits (101), Expect = 2e-06
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Query: 5 MVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELL 64
+V E PF + + + + VS L + LL P +R T +L+
Sbjct: 223 LVFEENPFCE------LEETVE---AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLV 273
Query: 65 QHPFLRQAGPPA 76
P++ Q A
Sbjct: 274 TDPWVTQPVNLA 285
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 42.6 bits (101), Expect = 2e-06
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 9/73 (12%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR------ 57
EM+ G PF E I + + + G L+ + ++P R
Sbjct: 216 EMLCGHAPFEAENEDDLFEAILNDE---VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQ 272
Query: 58 ATAAELLQHPFLR 70
+L+HPF +
Sbjct: 273 GGEHAILRHPFFK 285
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 42.3 bits (100), Expect = 3e-06
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 13/78 (16%)
Query: 5 MVDGEPPFFNEPPLQAM-RRIRD----MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
M+ G PF ++ + + +++ MP +SP Q + R++V DP+QR T
Sbjct: 201 MLVGRLPF-DDEFIPNLFKKVNSCVYVMPD-------FLSPGAQSLIRRMIVADPMQRIT 252
Query: 60 AAELLQHPFLRQAGPPAL 77
E+ + P+ P L
Sbjct: 253 IQEIRRDPWFNVNLPDYL 270
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 42.5 bits (100), Expect = 3e-06
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
++P + L+ +L DP++RAT ++ +H + +Q P L
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPE 281
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 42.2 bits (100), Expect = 3e-06
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL 78
+SP G ++R+L+ +PL R + E++Q + + P LL
Sbjct: 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLL 275
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 42.2 bits (100), Expect = 3e-06
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALL 78
++ + L +L DPL+RAT ++ +H + +Q P L
Sbjct: 234 LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF 274
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 41.9 bits (99), Expect = 4e-06
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 13 FNEPPLQAMRRIRDMPPPK--LKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLR 70
++E R P K + + RL ++++L DP +R T E L+HPF
Sbjct: 274 WDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
Query: 71 Q 71
Sbjct: 334 L 334
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 41.9 bits (99), Expect = 5e-06
Identities = 13/68 (19%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 5 MVDGEPPFFNEPPLQAM-RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAEL 63
V G+ PF + + + +I+ + + ++ L+ + R+L ++P R E+
Sbjct: 233 FVFGQCPF-MDERIMCLHSKIKSQAL-EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
Query: 64 LQHPFLRQ 71
HP++ +
Sbjct: 291 KLHPWVTR 298
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 41.8 bits (99), Expect = 5e-06
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Query: 11 PFFNEPPLQAMRRIRDMPPPKLKNTH--KVSPRLQGFLERLLVRDPLQRATAAELLQHPF 68
F+ + +I D + +S G L+ L DP +R T +LL HP+
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
Query: 69 LRQAGPPALLVPLMKGSRHSN 89
L +
Sbjct: 288 FENIREIEDLAKEHDKPAENL 308
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 41.5 bits (98), Expect = 6e-06
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 34 NTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
N H VSP FL++LL D R TA E ++HP+
Sbjct: 288 NQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 41.6 bits (98), Expect = 6e-06
Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPP-KLKNTHKVSPRLQGFLERLLVRDPLQR---AT 59
EM+ G+ PF+ + + +I + + + +S + + L D R
Sbjct: 265 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRLGRNG 323
Query: 60 AAELLQHPF 68
E+ +H F
Sbjct: 324 VEEIKRHLF 332
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 41.5 bits (98), Expect = 6e-06
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
A I+ +P K+ ++ SP+ LE++L D +R TAA+ L HPF
Sbjct: 255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 41.5 bits (98), Expect = 6e-06
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
+A I+ +P K+ +P+ L+R+LV DP +R TA E L+HP+L+
Sbjct: 255 RAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 41.5 bits (98), Expect = 6e-06
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATAAE 62
E + G PP+ + I P + + R + ++P R T +
Sbjct: 227 ECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGD 286
Query: 63 LLQ 65
L
Sbjct: 287 LSA 289
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 41.2 bits (97), Expect = 7e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 38 VSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
+SP + R+ V DP R + E+ H + + P L+
Sbjct: 247 ISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNE 289
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 41.5 bits (98), Expect = 7e-06
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
+A ++ +P + K+ + SP LE++LV D QR TA E L HP+
Sbjct: 257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 41.0 bits (97), Expect = 7e-06
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 10/81 (12%)
Query: 5 MVDGEPPFFNEPPLQAM-----RRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRAT 59
M+ GE P+ + + P K K+ L ++LV +P R T
Sbjct: 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK-----KIDSAPLALLHKILVENPSARIT 255
Query: 60 AAELLQHPFLRQAGPPALLVP 80
++ + + + P
Sbjct: 256 IPDIKKDRWYNKPLKKGAKRP 276
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 41.2 bits (97), Expect = 8e-06
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKV----SPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
A I+ + N V +P LE++LV D +R TAA+ L H + Q
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 41.3 bits (97), Expect = 8e-06
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
A R IR P + + + P L+R+LV +P +R T E L HPF ++
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 41.1 bits (97), Expect = 8e-06
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 36 HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
K+ L ++LV +P R T ++ + + + P
Sbjct: 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 41.1 bits (97), Expect = 9e-06
Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 19 QAMRRIRDMPPPKLKNT-----HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
A +R+ P + ++L +P +R + + L+HP+
Sbjct: 265 SARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 40.9 bits (96), Expect = 9e-06
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 21 MRRIRDMPPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
++ P LK +S LE +L +P +R T + L HP+L+
Sbjct: 316 IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 41.1 bits (97), Expect = 9e-06
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
+A + +P +++ P L+++L +P +R + L HP+L Q
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 40.3 bits (95), Expect = 1e-05
Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 6/88 (6%)
Query: 2 VVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
V ++ P PP + ++ L L FL LL +P R +A
Sbjct: 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL------DGNLMDFLHGLLQLNPDMRLSAK 289
Query: 62 ELLQHPFLRQAGPPALLVPLMKGSRHSN 89
+ L HP+ + A + H +
Sbjct: 290 QALHHPWFAEYYHHASMGGSRSHHHHHH 317
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 40.3 bits (95), Expect = 1e-05
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 19 QAMRRIRDMPPPKLKNTHKVSPRLQG----FLERLLVRDPLQRATAAELLQHPFLRQ 71
IR+ K ++ P + FLE++L P+ R TA E L HP++
Sbjct: 255 VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 40.2 bits (95), Expect = 2e-05
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 28 PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPL 81
+ + L ++L DP +R +A L HPF + P + L
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 299
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 39.5 bits (93), Expect = 3e-05
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 15 EPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGP 74
E R+++D +++ + + +++LLV DP QR + + L H F
Sbjct: 266 ELVKGQKRKVKDRLKAYVRDPYALD-----LIDKLLVLDPAQRIDSDDALNHDFFWSDPM 320
Query: 75 PALLVPLMK 83
P+ L ++
Sbjct: 321 PSDLKGMLS 329
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 39.0 bits (91), Expect = 4e-05
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 10 PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGF--LERLLVRDPLQRATAAELLQHP 67
P + K HKV P + F L++LL DP++R T+ + +Q P
Sbjct: 276 PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335
Query: 68 FLRQAGPP 75
+ + P
Sbjct: 336 YFLEDPLP 343
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 38.8 bits (91), Expect = 6e-05
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 17 PLQAMRRIRDMPPPKLKN-----THKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
P + + N + K + L LL P +R E L HP+ +
Sbjct: 261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 38.5 bits (90), Expect = 7e-05
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 27 MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
+ P ++ + + + L ++LV D +R + E LQHP++
Sbjct: 280 LFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 38.7 bits (91), Expect = 7e-05
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 28 PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPP 75
+ L +L DP +R +A + + HP+ + P
Sbjct: 262 EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQ 310
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 38.3 bits (90), Expect = 8e-05
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 27 MPPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPPALLVPLM 82
+ K + G L + L +P +R +A L HP+ + +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSH 313
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 38.4 bits (90), Expect = 9e-05
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 28 PPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
P + + +PRL G L +LL + R +A + ++HPF G +P
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 38.3 bits (90), Expect = 9e-05
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 46 LERLLVRDPLQRATAAELLQHPFLRQAGPP 75
L+ LL +P+QR +A E LQHP+ PP
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 37.9 bits (89), Expect = 1e-04
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 28 PPPKLKNTHKVSPRL--QGF--LERLLVRDPLQRATAAELLQHPFLRQAGPP 75
PP + V P + G L +L +P +R +A LQH +L +
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 306
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 37.7 bits (88), Expect = 1e-04
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 22/84 (26%)
Query: 4 EMVDGEPPFFNEPPLQAM---------RRIRDMPP--PKLKNTHKVSPRLQGFLERLLVR 52
EM+ G PF + I + P+ +S + L+ L +
Sbjct: 245 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLSVKAASVLKSFLNK 299
Query: 53 DPLQR------ATAAELLQHPFLR 70
DP +R A++ HPF R
Sbjct: 300 DPKERLGCHPQTGFADIQGHPFFR 323
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 37.9 bits (88), Expect = 1e-04
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFLRQ 71
L ++LV DP +R + + LQHP++
Sbjct: 335 LLSKMLVIDPAKRISVDDALQHPYINV 361
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 37.6 bits (88), Expect = 1e-04
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 22/84 (26%)
Query: 4 EMVDGEPPFFNEPPLQAM---------RRIRDMPP--PKLKNTHKVSPRLQGFLERLLVR 52
EM+ G PF + I + P+ +S + L+ L +
Sbjct: 202 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR-----SLSVKAASVLKSFLNK 256
Query: 53 DPLQR------ATAAELLQHPFLR 70
DP +R A++ HPF R
Sbjct: 257 DPKERLGCHPQTGFADIQGHPFFR 280
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 37.6 bits (88), Expect = 1e-04
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 10 PPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQHPFL 69
P + P + ++ + L L +L DP++R +A L+HP+
Sbjct: 269 PDWKQSFPKFRGKTLKRVLGALL------DDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
Query: 70 RQAGPP 75
Sbjct: 323 SHNDFD 328
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 37.2 bits (87), Expect = 2e-04
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 28 PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQAGPPA 76
P L + L ++ L + +P R TA + L+ + P
Sbjct: 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPT 302
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 37.1 bits (87), Expect = 2e-04
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 28 PPPKLKNT-HKVSPRLQGFLERLLVRDPLQRATAAELLQHPFLRQ 71
P ++ + L ++L DP QR TA + L+H + ++
Sbjct: 242 EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 36.6 bits (85), Expect = 3e-04
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFLRQ 71
L++LL +P +R +A + L+HPF+
Sbjct: 308 LLDKLLQFNPNKRISANDALKHPFVSI 334
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 36.6 bits (85), Expect = 3e-04
Identities = 9/25 (36%), Positives = 9/25 (36%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFL 69
RLL P R T E H F
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFF 340
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 36.5 bits (85), Expect = 3e-04
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFLRQAGPPALLVP 80
+ RLL P R TA E L HPF + +P
Sbjct: 301 LISRLLEYTPSARLTAIEALCHPFFDELRTGEARMP 336
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 36.6 bits (85), Expect = 4e-04
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 45 FLERLLVRDPLQRATAAELLQHPFL 69
LE++L +P R E + HPF
Sbjct: 301 LLEQILRYEPDLRINPYEAMAHPFF 325
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 35.8 bits (82), Expect = 6e-04
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERL----LVRDPLQ 56
V E + A++ +P P + +S L G LER L+ Q
Sbjct: 234 GKVREKSNEHIVVYDDLTGAVKFSSVLPTP-----NHLSGILAGKLERWLQCMLMWHQRQ 288
Query: 57 RATAAELLQHPFLRQ 71
R T + +
Sbjct: 289 RGTDPQNPNVGCFQA 303
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 34.7 bits (80), Expect = 0.002
Identities = 8/61 (13%), Positives = 15/61 (24%), Gaps = 1/61 (1%)
Query: 7 DGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
G + + DMP + + L L +L D + +
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRG-LQVLLTPVLANILEADQEKCWGFDQFFAE 303
Query: 67 P 67
Sbjct: 304 T 304
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 33.6 bits (77), Expect = 0.004
Identities = 12/90 (13%), Positives = 23/90 (25%), Gaps = 5/90 (5%)
Query: 4 EMVDGEPPFFNEPPLQ----AMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-A 58
++ P A R P + ++ R + D R A
Sbjct: 194 ALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSA 253
Query: 59 TAAELLQHPFLRQAGPPALLVPLMKGSRHS 88
+ L A +L P+ + +
Sbjct: 254 STLLNLMQQATAVADRTEVLGPIDEAPVSA 283
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 31.0 bits (70), Expect = 0.034
Identities = 17/80 (21%), Positives = 21/80 (26%), Gaps = 12/80 (15%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQR-ATAAE 62
+ P P LK L R + DP QR TA E
Sbjct: 268 ALTLDLPTRNGRYVDGLPE-----DDPVLK----TYDSYGRLLRRAIDPDPRQRFTTAEE 318
Query: 63 LLQ--HPFLRQAGPPALLVP 80
+ LR+ VP
Sbjct: 319 MSAQLTGVLREVVAQDTGVP 338
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 28.7 bits (64), Expect = 0.21
Identities = 8/59 (13%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 8 GEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAAELLQH 66
G + + DMP + + L L +L D + +
Sbjct: 246 GAISGVQKAENGPIDWSGDMPVSCSLSRG-LQVLLTPVLANILEADQEKCWGFDQFFAE 303
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 27.2 bits (60), Expect = 0.67
Identities = 7/68 (10%), Positives = 14/68 (20%), Gaps = 7/68 (10%)
Query: 1 MVVEMVDGEPPFFNEPPLQAMRRIRDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
V M+ G + + F +L +
Sbjct: 274 TVYCMLFGTYMKVKNEGGECKPEG------LFRRLPH-LDMWNEFFHVMLNIPDCHHLPS 326
Query: 61 AELLQHPF 68
+LL+
Sbjct: 327 LDLLRQKL 334
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A,
glycosidase, TAY-sachs disease, GM2 ganglisode, TIM
barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo
sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Length = 507
Score = 26.7 bits (59), Expect = 1.1
Identities = 8/32 (25%), Positives = 9/32 (28%), Gaps = 4/32 (12%)
Query: 29 PPKLKNTHKVSPRLQGFLERLLVR----DPLQ 56
+ RL F LL R PL
Sbjct: 465 NKLTSDLTFAYERLSHFRCELLRRGVQAQPLN 496
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer,
family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo
sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A*
2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Length = 507
Score = 26.6 bits (59), Expect = 1.1
Identities = 6/32 (18%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 29 PPKLKNTHKVSPRLQGFLERLLVR----DPLQ 56
+++ RL R++ R PL
Sbjct: 467 SKDVRDMDDAYDRLTRHRCRMVERGIAAQPLY 498
>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating,
A putative oxidoreduct; HET: GSH; 2.50A {Proteus
mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*
Length = 203
Score = 26.0 bits (58), Expect = 1.5
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 40 PRLQGFLERLLVRDPLQRATAAE-LLQ 65
LQ +L R+ R + A E L++
Sbjct: 176 SHLQDYLARIAQRPNVHSALVTEGLIK 202
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 26.1 bits (58), Expect = 1.6
Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 5/65 (7%)
Query: 4 EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
E++ GE PF L + + P +E DP R +
Sbjct: 206 ELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP---EPFAKLMEDCWNPDPHSRPSFT 262
Query: 62 ELLQH 66
+L
Sbjct: 263 NILDQ 267
>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET:
GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*
Length = 201
Score = 26.0 bits (58), Expect = 1.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 PRLQGFLERLLVRDPLQRATAAELL 64
P+ ER+L R +Q+A E L
Sbjct: 176 PKALKLRERVLARPNVQKAFKEEGL 200
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP:
a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 25.6 bits (57), Expect = 1.9
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 40 PRLQGFLERLLVRDPLQRATAAELLQ 65
+ F++R+ R +Q A +AE L+
Sbjct: 176 EHIAAFMQRMAERPEVQDALSAEGLK 201
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A
{Methylococcus capsulatus} PDB: 3uap_A*
Length = 227
Score = 25.7 bits (57), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 40 PRLQGFLERLLVRDPLQRATAAE 62
PR+ +LER R +Q A AE
Sbjct: 179 PRILAYLERNQARPAVQAAMKAE 201
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia
xenovorans} PDB: 2gdr_A*
Length = 203
Score = 25.7 bits (57), Expect = 2.1
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 40 PRLQGFLERLLVRDPLQRATAAE-LLQ 65
P LQ F R+ R+ +Q A AE L++
Sbjct: 176 PSLQAFQGRVGGREAVQSALRAEGLIK 202
>4g9h_A Glutathione S-transferase; GST, enzyme function initiative,
structural genomics; HET: GSH; 2.10A {Yersinia pestis}
Length = 211
Score = 25.6 bits (57), Expect = 2.1
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 40 PRLQGFLERLLVRDPLQRATAAELLQ 65
L ++ R+ R ++ A AAE ++
Sbjct: 179 SHLDQYMARVAERPAVKAALAAEDIK 204
>1f2e_A Glutathione S-transferase; GST complexed with glutathione,
thioredoxin superfamily fold transferase; HET: GSH;
2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1
c.47.1.5
Length = 201
Score = 25.6 bits (57), Expect = 2.3
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 40 PRLQGFLERLLVRDPLQRATAAE 62
P L + ++ R + A AE
Sbjct: 176 PALGAYAGKIAQRPAVGAALKAE 198
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein
structure initiative, northeast structural genomics
consortium, NESG; 2.10A {Escherichia coli} SCOP:
a.118.1.16
Length = 280
Score = 25.5 bits (56), Expect = 2.5
Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Query: 31 KLKNTHKVSPRLQGFLERLLVRD--PLQRATAAELLQHPFLRQA-GPPALLVPLMKGSRH 87
++K K + L + + D RATA E + P ++ +
Sbjct: 80 QIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFD 139
Query: 88 SN 89
+
Sbjct: 140 KS 141
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A
{Xylella fastidiosa}
Length = 207
Score = 24.9 bits (55), Expect = 3.4
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 40 PRLQGFLERLLVRDPLQRATAAE 62
L F ER+ +Q A AE
Sbjct: 182 DALSAFFERMEADPGVQAALQAE 204
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal
transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A
3ow7_A 3h9i_A 3h94_A 3h9t_B
Length = 413
Score = 25.2 bits (55), Expect = 3.8
Identities = 5/30 (16%), Positives = 10/30 (33%)
Query: 35 THKVSPRLQGFLERLLVRDPLQRATAAELL 64
V R GF++++ + L
Sbjct: 121 YAIVQARAAGFIDKVYPLTVGDKVQKGTPL 150
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 25.0 bits (55), Expect = 4.5
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 4 EMVDGEPPFFNEPPLQAMRRI--RDMPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATAA 61
E+ + P+ N P Q + + + +N + P++ +E +P +R + A
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN---PQVAAIIEGCWTNEPWKRPSFA 287
Query: 62 ELLQH--PFLRQAGPP 75
++ P ++ A PP
Sbjct: 288 TIMDLLRPLIKSAVPP 303
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 24.6 bits (54), Expect = 5.3
Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 4 EMVDGEPPFFNEPPLQAMRRIRD---MPPPKLKNTHKVSPRLQGFLERLLVRDPLQRATA 60
E+ E PF +P + ++ ++ + + L + +R T
Sbjct: 235 ELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI----GMGKEISDILLFCWAFEQEERPTF 290
Query: 61 AELLQH 66
+L+
Sbjct: 291 TKLMDM 296
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch
recognition, mismatched unpaired DNA binding protein-DNA
complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B*
3thy_B* 3thz_B*
Length = 918
Score = 24.1 bits (53), Expect = 8.7
Identities = 4/27 (14%), Positives = 10/27 (37%), Gaps = 3/27 (11%)
Query: 46 LERLLVRDPLQRATAAELLQHPFLRQA 72
+ER L ++ + E + +
Sbjct: 405 IERGLCSIYHKKCSTQEFFL---IVKT 428
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch
recognition, mismatched unpaired DNA binding protein-DNA
complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A*
2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Length = 934
Score = 24.2 bits (53), Expect = 9.1
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 3/27 (11%)
Query: 46 LERLLVRDPLQRATAAELLQHPFLRQA 72
L RL + Q A + + L Q
Sbjct: 387 LNRLAKKFQRQAANLQDCYR---LYQG 410
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.428
Gapped
Lambda K H
0.267 0.0779 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,460,638
Number of extensions: 76643
Number of successful extensions: 441
Number of sequences better than 10.0: 1
Number of HSP's gapped: 390
Number of HSP's successfully gapped: 193
Length of query: 90
Length of database: 6,701,793
Length adjustment: 57
Effective length of query: 33
Effective length of database: 5,110,296
Effective search space: 168639768
Effective search space used: 168639768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.3 bits)