Query psy10839
Match_columns 232
No_of_seqs 175 out of 1161
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 19:47:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jvi_A Protein tyrosine phosph 100.0 1.9E-49 6.6E-54 327.2 14.2 156 14-176 2-157 (161)
2 4etm_A LMPTP, low molecular we 100.0 8E-49 2.7E-53 327.2 12.9 153 15-176 17-170 (173)
3 3n8i_A Low molecular weight ph 100.0 4.5E-48 1.5E-52 317.9 13.5 153 13-173 2-156 (157)
4 1u2p_A Ptpase, low molecular w 100.0 3.4E-47 1.1E-51 313.8 16.1 156 14-178 2-158 (163)
5 1d1q_A Tyrosine phosphatase (E 100.0 8.7E-47 3E-51 310.9 17.4 155 13-172 4-159 (161)
6 2gi4_A Possible phosphotyrosin 100.0 1.3E-47 4.4E-52 314.8 11.4 151 17-177 2-153 (156)
7 2cwd_A Low molecular weight ph 100.0 4.8E-47 1.7E-51 312.6 14.8 157 14-181 2-158 (161)
8 3rof_A Low molecular weight pr 100.0 6.1E-47 2.1E-51 311.7 15.0 149 13-176 3-153 (158)
9 4etn_A LMPTP, low molecular we 100.0 8.8E-46 3E-50 311.6 12.8 149 16-176 34-182 (184)
10 4egs_A Ribose 5-phosphate isom 100.0 2.8E-45 9.5E-50 307.5 14.5 146 15-173 33-180 (180)
11 2wmy_A WZB, putative acid phos 100.0 2.7E-44 9.4E-49 293.0 13.4 141 16-174 8-149 (150)
12 1p8a_A Protein tyrosine phosph 100.0 5E-44 1.7E-48 290.0 10.0 140 16-174 4-144 (146)
13 2wja_A Putative acid phosphata 100.0 1.5E-43 5E-48 294.1 11.5 150 7-174 15-167 (168)
14 2fek_A Low molecular weight pr 100.0 2.8E-43 9.7E-48 292.2 13.0 142 16-175 22-164 (167)
15 2l17_A Synarsc, arsenate reduc 100.0 3.2E-41 1.1E-45 270.1 12.4 128 16-173 4-133 (134)
16 1jf8_A Arsenate reductase; ptp 100.0 6.2E-41 2.1E-45 267.5 11.7 128 15-171 2-130 (131)
17 3rh0_A Arsenate reductase; oxi 100.0 6.8E-41 2.3E-45 272.9 10.8 128 15-171 19-147 (148)
18 1jl3_A Arsenate reductase; alp 100.0 5.9E-40 2E-44 263.8 12.4 130 15-173 2-138 (139)
19 1y1l_A Arsenate reductase (ARS 100.0 7E-40 2.4E-44 259.0 8.9 122 18-171 1-123 (124)
20 3t38_A Arsenate reductase; low 100.0 1.5E-38 5E-43 273.1 13.1 136 10-176 75-211 (213)
21 1tvm_A PTS system, galactitol- 95.9 0.03 1E-06 42.4 7.9 42 15-58 20-61 (113)
22 2m1z_A LMO0427 protein; homolo 95.8 0.012 4E-07 44.7 5.0 69 16-110 2-72 (106)
23 1e2b_A Enzyme IIB-cellobiose; 94.6 0.063 2.2E-06 40.2 5.6 43 14-59 1-43 (106)
24 2kyr_A Fructose-like phosphotr 94.3 0.053 1.8E-06 41.4 4.7 65 17-107 6-72 (111)
25 2r48_A Phosphotransferase syst 93.5 0.1 3.5E-06 39.5 4.9 65 17-107 3-69 (106)
26 2r4q_A Phosphotransferase syst 93.1 0.093 3.2E-06 39.7 4.1 65 17-107 3-69 (106)
27 3p9y_A CG14216, LD40846P; phos 92.8 0.12 4E-06 43.2 4.7 91 14-113 7-126 (198)
28 3czc_A RMPB; alpha/beta sandwi 92.6 0.14 4.9E-06 38.3 4.6 42 16-58 18-59 (110)
29 4h3k_B RNA polymerase II subun 91.8 0.16 5.4E-06 42.8 4.3 88 16-112 25-141 (214)
30 1vkr_A Mannitol-specific PTS s 91.1 0.26 9E-06 37.9 4.7 41 15-57 12-53 (125)
31 2l2q_A PTS system, cellobiose- 89.9 0.43 1.5E-05 35.5 4.8 40 16-58 4-43 (109)
32 3nbm_A PTS system, lactose-spe 89.0 1.3 4.5E-05 33.1 7.0 40 15-57 5-44 (108)
33 3eag_A UDP-N-acetylmuramate:L- 86.0 1.5 5.2E-05 38.3 6.7 70 14-102 2-73 (326)
34 3dfz_A SIRC, precorrin-2 dehyd 84.2 3.5 0.00012 34.6 7.8 77 11-106 26-102 (223)
35 2ywr_A Phosphoribosylglycinami 82.5 2 6.8E-05 35.8 5.6 78 16-105 1-90 (216)
36 3auf_A Glycinamide ribonucleot 81.2 1.7 5.9E-05 36.7 4.7 89 15-115 21-123 (229)
37 2jtq_A Phage shock protein E; 79.2 2.9 0.0001 28.7 4.7 39 15-60 40-78 (85)
38 3f4a_A Uncharacterized protein 77.4 0.46 1.6E-05 38.0 -0.1 44 17-60 105-149 (169)
39 1t71_A Phosphatase, conserved 77.0 3.5 0.00012 36.0 5.5 64 13-81 1-66 (281)
40 3q0i_A Methionyl-tRNA formyltr 75.8 7 0.00024 34.5 7.2 81 13-105 4-95 (318)
41 4hv4_A UDP-N-acetylmuramate--L 75.0 6.8 0.00023 36.3 7.3 67 14-102 20-88 (494)
42 2k0z_A Uncharacterized protein 74.5 5.5 0.00019 28.8 5.3 40 15-61 55-94 (110)
43 3sqn_A Conserved domain protei 74.4 4 0.00014 38.0 5.5 57 14-103 396-452 (485)
44 3hn7_A UDP-N-acetylmuramate-L- 74.1 5.7 0.0002 37.1 6.5 26 12-37 15-40 (524)
45 1qxn_A SUD, sulfide dehydrogen 73.8 2.1 7.3E-05 32.6 2.9 40 15-60 81-120 (137)
46 1wv9_A Rhodanese homolog TT165 72.2 3.6 0.00012 28.8 3.7 37 17-60 54-90 (94)
47 3foj_A Uncharacterized protein 71.2 2.2 7.5E-05 30.4 2.3 40 15-61 55-94 (100)
48 1tq1_A AT5G66040, senescence-a 71.2 4.8 0.00016 30.1 4.3 40 15-60 81-120 (129)
49 1cfz_A Hydrogenase 2 maturatio 70.0 5 0.00017 31.8 4.4 44 17-60 1-46 (162)
50 3nhv_A BH2092 protein; alpha-b 67.9 4.5 0.00016 31.0 3.6 40 15-60 71-111 (144)
51 2hhg_A Hypothetical protein RP 67.7 3.2 0.00011 31.1 2.7 40 15-60 85-124 (139)
52 3eme_A Rhodanese-like domain p 67.2 3.1 0.00011 29.7 2.4 40 15-61 55-94 (103)
53 1m2d_A [2Fe-2S] ferredoxin; th 66.7 5.6 0.00019 29.3 3.8 44 16-59 2-57 (110)
54 1qv9_A F420-dependent methylen 66.1 3.7 0.00013 35.4 3.0 51 14-73 1-51 (283)
55 1gmx_A GLPE protein; transfera 65.7 3.9 0.00013 29.3 2.8 40 15-60 57-96 (108)
56 2bw0_A 10-FTHFDH, 10-formyltet 64.9 11 0.00036 33.4 5.9 81 13-105 19-109 (329)
57 4huj_A Uncharacterized protein 62.8 5 0.00017 32.7 3.1 74 10-105 17-91 (220)
58 2auv_A Potential NAD-reducing 62.7 1.7 6E-05 30.5 0.3 30 16-45 5-34 (85)
59 3obb_A Probable 3-hydroxyisobu 62.5 13 0.00044 32.1 5.9 67 16-105 3-69 (300)
60 2fsx_A RV0390, COG0607: rhodan 61.6 6.2 0.00021 30.1 3.3 40 15-60 79-118 (148)
61 1p3d_A UDP-N-acetylmuramate--a 61.4 23 0.0008 32.3 7.8 67 15-103 17-85 (475)
62 2j6p_A SB(V)-AS(V) reductase; 59.1 7.7 0.00026 29.8 3.5 44 17-60 69-113 (152)
63 3lk7_A UDP-N-acetylmuramoylala 59.1 18 0.0006 32.9 6.5 70 15-103 8-80 (451)
64 3flh_A Uncharacterized protein 59.1 3 0.0001 31.0 1.0 40 15-60 70-110 (124)
65 1rcu_A Conserved hypothetical 58.5 7.1 0.00024 32.1 3.3 60 10-80 17-83 (195)
66 2f00_A UDP-N-acetylmuramate--L 58.1 23 0.00077 32.6 7.1 67 15-103 18-86 (491)
67 3av3_A Phosphoribosylglycinami 57.1 23 0.00078 29.2 6.3 88 16-115 3-104 (212)
68 3iwh_A Rhodanese-like domain p 57.0 6.9 0.00024 28.3 2.7 39 15-60 55-93 (103)
69 1t70_A Phosphatase; crystal, X 56.7 40 0.0014 28.6 7.9 58 17-81 1-60 (255)
70 3uuw_A Putative oxidoreductase 55.5 15 0.00052 31.1 5.1 73 13-105 3-76 (308)
71 3gk5_A Uncharacterized rhodane 54.7 5.3 0.00018 28.9 1.7 39 15-60 54-92 (108)
72 3b1f_A Putative prephenate deh 52.2 31 0.0011 28.7 6.5 73 14-105 4-76 (290)
73 2z06_A Putative uncharacterize 51.0 54 0.0018 27.9 7.8 58 17-81 1-60 (252)
74 3d1p_A Putative thiosulfate su 50.9 6 0.00021 29.7 1.6 40 15-60 90-129 (139)
75 3g5j_A Putative ATP/GTP bindin 50.5 7.2 0.00025 28.5 1.9 38 17-60 90-127 (134)
76 3hix_A ALR3790 protein; rhodan 50.3 5.3 0.00018 28.7 1.1 40 15-60 51-90 (106)
77 3i2v_A Adenylyltransferase and 49.8 6.9 0.00024 28.4 1.7 42 18-60 74-116 (127)
78 3v5n_A Oxidoreductase; structu 49.8 53 0.0018 29.3 7.9 88 14-113 35-130 (417)
79 3ilm_A ALR3790 protein; rhodan 48.7 6.4 0.00022 30.1 1.4 40 15-60 55-94 (141)
80 1vee_A Proline-rich protein fa 48.5 13 0.00043 27.8 3.1 37 15-57 73-109 (134)
81 4f67_A UPF0176 protein LPG2838 47.0 9.5 0.00032 32.8 2.4 40 15-60 180-219 (265)
82 1z82_A Glycerol-3-phosphate de 46.7 51 0.0017 28.2 7.1 71 16-105 14-90 (335)
83 2ew2_A 2-dehydropantoate 2-red 46.1 23 0.00078 29.5 4.7 71 16-105 3-84 (316)
84 4e5v_A Putative THUA-like prot 45.9 65 0.0022 27.5 7.6 39 15-56 3-41 (281)
85 3e9m_A Oxidoreductase, GFO/IDH 45.2 61 0.0021 27.7 7.4 73 14-105 3-77 (330)
86 2xxa_A Signal recognition part 44.2 50 0.0017 30.0 7.0 41 15-57 99-139 (433)
87 3kcq_A Phosphoribosylglycinami 43.9 23 0.00078 29.4 4.2 79 15-105 7-92 (215)
88 3db2_A Putative NADPH-dependen 43.8 64 0.0022 27.8 7.3 72 13-105 2-76 (354)
89 1jkx_A GART;, phosphoribosylgl 43.6 50 0.0017 27.1 6.2 87 17-115 1-101 (212)
90 3a11_A Translation initiation 42.4 23 0.00077 31.5 4.2 79 15-105 141-219 (338)
91 4ekn_B Aspartate carbamoyltran 42.0 1.1E+02 0.0037 26.7 8.5 74 15-102 150-225 (306)
92 3ggo_A Prephenate dehydrogenas 41.9 71 0.0024 27.4 7.3 72 15-105 32-104 (314)
93 2f46_A Hypothetical protein; s 40.9 19 0.00066 27.5 3.1 48 15-85 101-149 (156)
94 3hzu_A Thiosulfate sulfurtrans 40.3 12 0.00042 32.4 2.0 41 15-60 110-150 (318)
95 3e18_A Oxidoreductase; dehydro 39.1 38 0.0013 29.5 5.1 73 13-105 2-75 (359)
96 3csu_A Protein (aspartate carb 38.7 1.5E+02 0.0052 25.8 8.9 71 16-103 154-229 (310)
97 4dll_A 2-hydroxy-3-oxopropiona 38.7 65 0.0022 27.5 6.5 67 16-105 31-97 (320)
98 1ydh_A AT5G11950; structural g 38.7 30 0.001 28.7 4.1 56 14-79 7-66 (216)
99 1weh_A Conserved hypothetical 38.7 32 0.0011 27.3 4.1 53 17-80 2-58 (171)
100 1e0c_A Rhodanese, sulfurtransf 38.1 19 0.00065 29.9 2.8 41 15-60 80-120 (271)
101 1fmt_A Methionyl-tRNA FMet for 38.0 62 0.0021 28.1 6.3 77 15-105 2-91 (314)
102 2eq7_C 2-oxoglutarate dehydrog 38.0 23 0.00078 21.0 2.5 30 66-95 2-36 (40)
103 1pjq_A CYSG, siroheme synthase 37.7 76 0.0026 28.9 7.1 77 11-106 7-83 (457)
104 2h78_A Hibadh, 3-hydroxyisobut 37.0 60 0.0021 27.1 5.9 67 15-104 2-68 (302)
105 2e85_A Hydrogenase 3 maturatio 36.6 34 0.0011 26.8 3.9 41 17-59 4-46 (159)
106 3ec7_A Putative dehydrogenase; 36.4 57 0.0019 28.3 5.8 75 13-105 20-97 (357)
107 2a33_A Hypothetical protein; s 35.8 37 0.0012 28.1 4.2 58 12-79 9-70 (215)
108 3tqq_A Methionyl-tRNA formyltr 35.7 55 0.0019 28.6 5.5 78 16-105 2-90 (314)
109 1jx7_A Hypothetical protein YC 35.5 81 0.0028 22.2 5.7 78 16-93 1-92 (117)
110 3p9x_A Phosphoribosylglycinami 34.9 52 0.0018 27.2 5.0 78 16-105 2-91 (211)
111 4e21_A 6-phosphogluconate dehy 34.7 39 0.0013 29.9 4.5 71 12-105 18-91 (358)
112 1uar_A Rhodanese; sulfurtransf 33.7 17 0.00059 30.4 1.9 41 15-60 232-272 (285)
113 1t3k_A Arath CDC25, dual-speci 33.5 24 0.00081 27.0 2.5 45 15-60 84-132 (152)
114 1urh_A 3-mercaptopyruvate sulf 33.4 34 0.0012 28.5 3.7 41 15-61 229-269 (280)
115 1j6u_A UDP-N-acetylmuramate-al 32.7 1.1E+02 0.0038 27.8 7.3 67 16-104 12-80 (469)
116 1td9_A Phosphate acetyltransfe 32.4 17 0.00058 31.9 1.7 89 17-106 165-277 (329)
117 4ezb_A Uncharacterized conserv 31.9 57 0.0019 28.0 5.0 74 16-106 24-98 (317)
118 2hi1_A 4-hydroxythreonine-4-ph 31.8 24 0.00081 31.5 2.5 89 16-106 163-273 (330)
119 3tqr_A Phosphoribosylglycinami 31.7 1.1E+02 0.0036 25.3 6.4 88 15-115 4-105 (215)
120 3c24_A Putative oxidoreductase 31.6 1.9E+02 0.0064 23.9 8.1 66 16-105 11-77 (286)
121 3g0o_A 3-hydroxyisobutyrate de 31.6 1.3E+02 0.0043 25.3 7.1 69 15-105 6-74 (303)
122 3hdj_A Probable ornithine cycl 30.8 26 0.00089 30.5 2.6 74 15-106 120-194 (313)
123 2a2k_A M-phase inducer phospha 30.8 28 0.00096 26.9 2.6 45 15-60 88-140 (175)
124 1vb5_A Translation initiation 29.5 41 0.0014 28.8 3.6 78 16-105 110-187 (276)
125 1d4o_A NADP(H) transhydrogenas 29.3 66 0.0023 26.2 4.5 67 31-105 39-107 (184)
126 2iuy_A Avigt4, glycosyltransfe 29.3 73 0.0025 26.4 5.2 96 14-112 1-136 (342)
127 1e0c_A Rhodanese, sulfurtransf 29.2 27 0.00094 28.9 2.4 41 15-61 222-262 (271)
128 1c25_A CDC25A; hydrolase, cell 29.1 28 0.00095 26.5 2.2 45 15-60 86-138 (161)
129 3pu6_A Uncharacterized protein 28.5 42 0.0014 26.3 3.2 37 17-60 3-45 (157)
130 2bib_A CBPE, teichoic acid pho 28.4 21 0.00073 33.0 1.7 58 16-81 220-277 (547)
131 2qyt_A 2-dehydropantoate 2-red 28.2 29 0.00099 29.0 2.4 78 14-105 6-93 (317)
132 2cvz_A Dehydrogenase, 3-hydrox 27.7 95 0.0033 25.4 5.6 65 17-106 2-66 (289)
133 2eg4_A Probable thiosulfate su 27.3 29 0.00099 28.1 2.2 39 15-60 183-221 (230)
134 3llv_A Exopolyphosphatase-rela 27.1 1.1E+02 0.0039 22.0 5.4 72 15-105 5-80 (141)
135 1f0k_A MURG, UDP-N-acetylgluco 26.8 70 0.0024 26.7 4.6 35 17-54 7-41 (364)
136 1ml4_A Aspartate transcarbamoy 26.8 1.3E+02 0.0046 26.1 6.5 73 16-103 155-229 (308)
137 3ecs_A Translation initiation 26.7 29 0.00098 30.6 2.1 78 16-105 122-199 (315)
138 1djl_A Transhydrogenase DIII; 26.2 89 0.003 25.9 4.8 61 37-105 68-130 (207)
139 3rfo_A Methionyl-tRNA formyltr 25.8 66 0.0023 28.1 4.3 80 14-105 2-92 (317)
140 2ce2_X GTPase HRAS; signaling 25.6 50 0.0017 23.7 3.0 26 14-39 1-26 (166)
141 4ehx_A Tetraacyldisaccharide 4 25.1 30 0.001 30.3 1.9 38 16-58 33-75 (315)
142 1uar_A Rhodanese; sulfurtransf 25.0 17 0.00057 30.5 0.3 41 15-60 78-118 (285)
143 4gbj_A 6-phosphogluconate dehy 24.7 57 0.0019 27.8 3.6 66 17-105 6-71 (297)
144 2e0t_A Dual specificity phosph 24.5 57 0.0019 24.2 3.2 23 15-37 84-107 (151)
145 3op3_A M-phase inducer phospha 24.3 48 0.0016 27.3 3.0 43 18-61 126-174 (216)
146 3beo_A UDP-N-acetylglucosamine 24.2 2.1E+02 0.0071 23.8 7.1 30 11-41 3-32 (375)
147 4ds3_A Phosphoribosylglycinami 24.1 88 0.003 25.7 4.6 80 14-105 5-96 (209)
148 3aay_A Putative thiosulfate su 24.0 35 0.0012 28.3 2.1 41 15-60 76-116 (277)
149 3ipz_A Monothiol glutaredoxin- 23.9 73 0.0025 22.7 3.6 47 30-81 4-50 (109)
150 4had_A Probable oxidoreductase 23.8 84 0.0029 26.8 4.6 76 9-105 16-96 (350)
151 1qb0_A Protein (M-phase induce 23.7 48 0.0016 26.7 2.8 44 16-60 109-160 (211)
152 2af4_C Phosphate acetyltransfe 22.8 25 0.00086 30.9 1.0 88 17-105 164-276 (333)
153 1xea_A Oxidoreductase, GFO/IDH 22.8 1.3E+02 0.0045 25.3 5.7 69 16-105 2-73 (323)
154 1evy_A Glycerol-3-phosphate de 22.8 1.9E+02 0.0067 24.7 6.8 71 16-105 15-95 (366)
155 3cf4_G Acetyl-COA decarboxylas 22.6 1E+02 0.0036 23.8 4.6 79 17-106 35-118 (170)
156 3ktd_A Prephenate dehydrogenas 22.6 62 0.0021 28.5 3.5 67 16-105 8-78 (341)
157 1rhs_A Sulfur-substituted rhod 22.4 37 0.0013 28.6 2.0 40 15-60 239-278 (296)
158 3i9v_2 NADH-quinone oxidoreduc 22.2 87 0.003 25.1 4.1 42 17-58 77-125 (181)
159 1x7d_A Ornithine cyclodeaminas 22.0 1.3E+02 0.0043 26.4 5.5 70 15-105 128-204 (350)
160 1urh_A 3-mercaptopyruvate sulf 21.9 41 0.0014 27.9 2.2 40 15-60 85-125 (280)
161 3okp_A GDP-mannose-dependent a 21.8 61 0.0021 27.2 3.3 32 94-127 139-170 (394)
162 1yxo_A 4-hydroxythreonine-4-ph 21.4 37 0.0013 30.2 1.8 89 16-106 156-267 (328)
163 1meo_A Phosophoribosylglycinam 21.2 1.1E+02 0.0037 25.0 4.5 86 18-115 2-101 (209)
164 1kyq_A Met8P, siroheme biosynt 21.2 59 0.002 27.9 3.0 42 8-57 5-46 (274)
165 1yt8_A Thiosulfate sulfurtrans 21.1 45 0.0016 30.9 2.4 40 15-60 62-101 (539)
166 2eg4_A Probable thiosulfate su 21.0 89 0.003 25.1 4.0 35 16-56 61-95 (230)
167 3gx8_A Monothiol glutaredoxin- 20.7 1.1E+02 0.0039 22.3 4.2 47 30-81 2-48 (121)
168 3ego_A Probable 2-dehydropanto 20.7 1.1E+02 0.0038 25.9 4.7 70 16-105 2-77 (307)
169 3fr7_A Putative ketol-acid red 20.6 1.1E+02 0.0038 28.9 5.0 76 17-105 55-131 (525)
170 2eq8_C Pyruvate dehydrogenase 20.5 58 0.002 19.1 2.1 16 66-81 2-17 (40)
No 1
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=100.00 E-value=1.9e-49 Score=327.17 Aligned_cols=156 Identities=24% Similarity=0.406 Sum_probs=143.7
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
|+|++|||||+||+|||||||++|+++++++|+++.|+|+||||.++++|+++||+++++|+++|||++|+|++|+++++
T Consensus 2 ~~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~ 81 (161)
T 3jvi_A 2 PGSMKLLFVCLGNICRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDF 81 (161)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHH
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHh
Confidence 46789999999999999999999999999999988999999999998899999999999999999999999999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTL 173 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L 173 (232)
.+|||||+||+.|++.|.+.+|....+||++|++|.+. ..+|+||||||++.+. |+++ +++|+++|+.|+++|
T Consensus 82 ~~~DlIl~Md~~~~~~l~~~~p~~~~~kv~ll~~~~~~---~~~~~I~DPy~~~~~~-f~~~---~~~I~~~~~~ll~~l 154 (161)
T 3jvi_A 82 KNFDYIFAMDNDNYYELLDRCPEQYKQKIFKMVDFCTT---IKTTEVPDPYYGGEKG-FHRV---IDILEDACENLIIKL 154 (161)
T ss_dssp HHCSEEEESSHHHHHHHHHHSCGGGGGGEEEGGGGCSS---CCCSSCCCCC--CHHH-HHHH---HHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeChHHHHHHHHhcCccccceEEehhhhcCC---cCCCCCcCCCCCCHHH-HHHH---HHHHHHHHHHHHHHH
Confidence 99999999999999999999994357899999999864 3479999999999999 9999 999999999999999
Q ss_pred hhh
Q psy10839 174 GIE 176 (232)
Q Consensus 174 ~~~ 176 (232)
+++
T Consensus 155 ~~~ 157 (161)
T 3jvi_A 155 EEG 157 (161)
T ss_dssp HHS
T ss_pred Hhc
Confidence 775
No 2
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=100.00 E-value=8e-49 Score=327.16 Aligned_cols=153 Identities=26% Similarity=0.452 Sum_probs=143.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
.|++|||||+||||||||||++|+++++++|+.+.|+|+||||.+++.|+|+||+++++|+++|||+ +|+||+|+++|+
T Consensus 17 ~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~~~G~~~d~~a~~~l~~~Gid~s~h~ar~l~~~d~ 96 (173)
T 4etm_A 17 SMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVSEQDL 96 (173)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred CccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccCCCCCCCCHHHHHHHHHCCccccCCccccCCHhhc
Confidence 4679999999999999999999999999999999999999999999999999999999999999999 799999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTL 173 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L 173 (232)
.+|||||+||+.|++.|.+.+|.....|+++|++|.+. ....|||||||++ + |+++ +++|+++|+.|+++|
T Consensus 97 ~~~DlIl~Md~~~~~~l~~~~p~~~~~kv~~l~~~~~~---~~~~dVpDPyy~~--~-Fe~v---~~~I~~~~~~ll~~l 167 (173)
T 4etm_A 97 DDFDYIIAMDAENIGSLRSMAGFKNTSHIKRLLDYVED---SDLADVPDPYYTG--N-FEEV---CQLIKTGCEQLLASI 167 (173)
T ss_dssp HHCSEEEESSHHHHHHHHHHHTTSCCTTEEEGGGGSTT---CSCCSCCCHHHHC--C-HHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCchHHHHHHHHcCccchhheeeecccccc---CCCCcCCCCCCCC--H-HHHH---HHHHHHHHHHHHHHH
Confidence 99999999999999999999997668899999999875 4567999999875 6 9999 999999999999999
Q ss_pred hhh
Q psy10839 174 GIE 176 (232)
Q Consensus 174 ~~~ 176 (232)
+++
T Consensus 168 ~~e 170 (173)
T 4etm_A 168 QKE 170 (173)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 3
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=100.00 E-value=4.5e-48 Score=317.95 Aligned_cols=153 Identities=29% Similarity=0.538 Sum_probs=141.6
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDD 92 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~d 92 (232)
.|++++|||||+||+|||||||++|++++.++|+.+.|+|+||||.++++|+++||+++++|+++|||++|+|++|++++
T Consensus 2 ~~~~~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~ 81 (157)
T 3n8i_A 2 EQATKSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKRHGIPMSHVARQITKED 81 (157)
T ss_dssp --CCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEESSSTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHH
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHHHHHHcCCCCcEEEEeeecCccccCCCCCHHHHHHHHHcCcCCCCceeECCHHH
Confidence 46789999999999999999999999999999998789999999999989999999999999999999999999999999
Q ss_pred cCCccEEEEecCCcHHHHHHhCCC--CCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy10839 93 FYKFDYIIATDETDLSFLRLEAPP--DSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFL 170 (232)
Q Consensus 93 l~~aDlII~Md~~~~~~L~~~~P~--~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll 170 (232)
+.+|||||+||+.|++.|.+.+|. ...+|+++|++|.+. ...+||||||++.++ |+++ |++|+++|+.|+
T Consensus 82 ~~~~DlIi~M~~~n~~~l~~~~p~~~~~~~kv~ll~~~~~~----~~~dVpDPy~~~~~~-F~~v---~~~I~~~~~~ll 153 (157)
T 3n8i_A 82 FATFDYILCMDESNLRDLNRKSNQVKTCKAKIELLGSYDPQ----KQLIIEDPYYGNDSD-FETV---YQQCVRCCRAFL 153 (157)
T ss_dssp HHHCSEEEESSHHHHHHHHHHHTTSSCCCCEEEEGGGGCTT----CCCCCCCCTTSCHHH-HHHH---HHHHHHHHHHHH
T ss_pred cCCCCEEEEeCcHHHHHHHHHCCCccCccceEEEHHHhCcC----CCCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHH
Confidence 999999999999999999999993 357899999999863 246999999999999 9999 999999999998
Q ss_pred HHH
Q psy10839 171 DTL 173 (232)
Q Consensus 171 ~~L 173 (232)
+++
T Consensus 154 ~~~ 156 (157)
T 3n8i_A 154 EKA 156 (157)
T ss_dssp HCC
T ss_pred HHh
Confidence 753
No 4
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=100.00 E-value=3.4e-47 Score=313.81 Aligned_cols=156 Identities=24% Similarity=0.373 Sum_probs=142.8
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
.++++|||||+||+|||||||++|+++++++|+++.|+|+||||.+++.|+++||+++++|+++|||++|+||+|+++++
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s~~ar~l~~~~~ 81 (163)
T 1u2p_A 2 SDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHL 81 (163)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCCCCCCBCCHHHH
T ss_pred CCCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCCceeeECChhhc
Confidence 35689999999999999999999999999999988999999999998889999999999999999999999999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCC-CCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGP-SDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDT 172 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~-~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~ 172 (232)
.+ ||||+||+.|++.|.+.+|. . +|++++++|++.. ... |+||||||++.+. |+++ +++|+++|+.|++.
T Consensus 82 ~~-DlIi~Md~~~~~~l~~~~p~-~-~kv~~l~~~~~~~--~~~~w~I~DP~~~~~~~-f~~~---~~~I~~~~~~ll~~ 152 (163)
T 1u2p_A 82 AA-DLLVALDRNHARLLRQLGVE-A-ARVRMLRSFDPRS--GTHALDVEDPYYGDHSD-FEEV---FAVIESALPGLHDW 152 (163)
T ss_dssp TS-SEEEESSHHHHHHHHHTTCC-G-GGEEEGGGGSTTC--CSSCCCCCCCTTSCHHH-HHHH---HHHHHHHHHHHHHH
T ss_pred cC-CEEEEeCHHHHHHHHHHCCC-c-ceEEehhhhcccc--cCCCCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHH
Confidence 99 99999999999999999998 4 8999999997641 112 6999999999988 9999 99999999999999
Q ss_pred HhhhCC
Q psy10839 173 LGIEVP 178 (232)
Q Consensus 173 L~~~l~ 178 (232)
|++.++
T Consensus 153 l~~~~~ 158 (163)
T 1u2p_A 153 VDERLA 158 (163)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 977643
No 5
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=100.00 E-value=8.7e-47 Score=310.90 Aligned_cols=155 Identities=26% Similarity=0.453 Sum_probs=141.5
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCc-EEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNE-WIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~-i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~ 91 (232)
-|++++|||||+||+|||||||++|++++.++|+++. |+|+||||.+++.|+++||+++++|+++|||++|+||+|+++
T Consensus 4 ~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~~~g~~~~p~a~~~l~~~Gid~s~~ar~l~~~ 83 (161)
T 1d1q_A 4 EKPKISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKINHKGKQIKTK 83 (161)
T ss_dssp CSCCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCTTBTCCCCHHHHHHHHHTTCCCCCCBCBCCGG
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCCcCCCCCCHHHHHHHHHcCcCCCceEeECCHH
Confidence 3567899999999999999999999999999999777 999999999988899999999999999999999999999999
Q ss_pred ccCCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 92 DFYKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLD 171 (232)
Q Consensus 92 dl~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~ 171 (232)
++.+|||||+||+.|++.|.+.+|....+|+++|++|.+..+ ...|+|||||+++.+. |+++ +++|+++|+.|++
T Consensus 84 ~~~~~DlIl~M~~~~~~~l~~~~p~~~~~kv~~l~~~~~~~~-~~~~~i~DP~~~~~~~-f~~~---~~~I~~~~~~ll~ 158 (161)
T 1d1q_A 84 HFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDG-TVQTIIEDPWYGDIQD-FEYN---FKQITYFSKQFLK 158 (161)
T ss_dssp GGGTCSEEEESSHHHHHHHHHHCCTTCSCEEEEGGGGCCCSS-SSCSSCCCCTTSCHHH-HHHH---HHHHHHHHHHHHH
T ss_pred HHhhCCEEEEeCHHHHHHHHHHCCccchhhEEeHhhhccccc-CCCCcCCCCCCCCHHH-HHHH---HHHHHHHHHHHHh
Confidence 999999999999999999999999755789999999975300 1259999999999888 9999 9999999999987
Q ss_pred H
Q psy10839 172 T 172 (232)
Q Consensus 172 ~ 172 (232)
.
T Consensus 159 ~ 159 (161)
T 1d1q_A 159 K 159 (161)
T ss_dssp H
T ss_pred h
Confidence 5
No 6
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=100.00 E-value=1.3e-47 Score=314.77 Aligned_cols=151 Identities=21% Similarity=0.368 Sum_probs=141.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccCC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFYK 95 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~~ 95 (232)
++|||||+||+|||||||++|++++.++|+++.|+|+||||.+++.|+++||+++++|+++|||+ +|+||+|+++++.+
T Consensus 2 ~~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~~~a~~~l~~~Gid~s~~~ar~l~~~d~~~ 81 (156)
T 2gi4_A 2 KKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGEHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDE 81 (156)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCSSTTCCCCHHHHHHHHHTSCSCCCCCCCBCCHHHHTT
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCCCccCCccccCCHHHhcc
Confidence 58999999999999999999999999999988999999999998899999999999999999999 79999999999999
Q ss_pred ccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10839 96 FDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTLGI 175 (232)
Q Consensus 96 aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L~~ 175 (232)
|||||+||+.|++.|.+.+|. ..+|+++|++|.+. ...|+||||||++ . |+++ +++|+++|+.|+++|++
T Consensus 82 ~DlIi~Md~~~~~~l~~~~p~-~~~kv~~l~~~~~~---~~~~~I~DP~~~~--~-f~~v---~~~I~~~~~~ll~~l~~ 151 (156)
T 2gi4_A 82 SDFLITMDNSNFKNVLKNFTN-TQNKVLKITDFSPS---LNYDEVPDPWYSG--N-FDET---YKILSLACKNLLVFLSK 151 (156)
T ss_dssp CSEEECCCHHHHHHHHHHSCG-GGGGEECTTTTCSS---CCCCSSCHHHHTS--C-SHHH---HHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECChHHHHHHHHCCC-ccCeEEEehhhcCC---CCCCCCCCCCCCC--H-HHHH---HHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 57899999999864 2469999999986 7 9999 99999999999999887
Q ss_pred hC
Q psy10839 176 EV 177 (232)
Q Consensus 176 ~l 177 (232)
+-
T Consensus 152 ~~ 153 (156)
T 2gi4_A 152 HH 153 (156)
T ss_dssp CS
T ss_pred hc
Confidence 54
No 7
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-47 Score=312.58 Aligned_cols=157 Identities=28% Similarity=0.471 Sum_probs=141.6
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
.++++|||||+||+|||||||+||++++.++|+.+.|+|+||||.+|+.|+++||+++++|+++|||++|+|++|+++++
T Consensus 2 ~~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~ar~l~~~~~ 81 (161)
T 2cwd_A 2 DRPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFPHVARRLTREDV 81 (161)
T ss_dssp CCCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCCCCCCBCCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCccCCCCCHHHHHHHHHcCcCccccccCCCHhHh
Confidence 46789999999999999999999999999999988999999999998899999999999999999999999999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTL 173 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L 173 (232)
.+|||||+||+.|++.|.+.+|. ..+|++++++|+. ..+||||||++.+. |+++ +++|+++|+.|++.|
T Consensus 82 ~~~DlIi~M~~~~~~~l~~~~p~-~~~kv~~l~~~~~------~~~i~DP~~~~~~~-f~~~---~~~I~~~v~~ll~~l 150 (161)
T 2cwd_A 82 LAYDHILVMDRENLEEVLRRFPE-ARGKVRLVLEELG------GGEVQDPYYGDLED-FREV---YWTLEAALQAFLDRH 150 (161)
T ss_dssp HHCSEEEESSHHHHHHHHHHCGG-GTTTEEEGGGGGT------CCCCCCCTTSCHHH-HHHH---HHHHHHHHHHHHHHH
T ss_pred ccCCEEEECChHHHHHHHHHCCC-ccCcEEeehhhcC------CCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHHH
Confidence 99999999999999999999998 4789999988863 26999999999898 9999 999999999999999
Q ss_pred hhhCCCCc
Q psy10839 174 GIEVPETT 181 (232)
Q Consensus 174 ~~~l~~~~ 181 (232)
....|..+
T Consensus 151 ~~~~~~~~ 158 (161)
T 2cwd_A 151 GSPSPAAE 158 (161)
T ss_dssp C-------
T ss_pred HhcCCccc
Confidence 77655544
No 8
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=100.00 E-value=6.1e-47 Score=311.66 Aligned_cols=149 Identities=25% Similarity=0.438 Sum_probs=139.3
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~ 91 (232)
+|.|++|||||+||+|||||||++|+++++++|+++ |+|+||||.++++|+++||.++++|+++|||+ +|+|++|+++
T Consensus 3 ~~~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~-~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~~ar~l~~~ 81 (158)
T 3rof_A 3 FQGMVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHD-IKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEAT 81 (158)
T ss_dssp CCSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCCS-EEEEEEETTCCSTTCCCCHHHHHHHHHTTCCCTTCCCCBCCTT
T ss_pred CCCCCEEEEEeCCchhHHHHHHHHHHHHHHHcCCCC-eEEEecccCCcccCCCCCHHHHHHHHHcCCCcCCCcceECChh
Confidence 567889999999999999999999999999999976 99999999999889999999999999999999 6999999998
Q ss_pred ccCCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCC-CCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q psy10839 92 DFYKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGP-SDLPDPFFLKTKELINALDDIIHRGYWYLRGFL 170 (232)
Q Consensus 92 dl~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~-~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll 170 (232)
+ +|||||+||+.|++.|.+.+|.. ..|+++|++|++. . |+|||||+++ + |+++ +++|+++|+.|+
T Consensus 82 ~--~~DlIi~Md~~~~~~l~~~~p~~-~~kv~~l~~~~~~-----~~~~VpDPyy~~--~-F~~v---~~~Ie~~~~~ll 147 (158)
T 3rof_A 82 D--DFDYIVAMDQSNVDNIKSINPNL-KGQLFKLLEFSNM-----EESDVPDPYYTN--N-FEGV---YDMVLSSCDNLI 147 (158)
T ss_dssp C--CCSEEEESSHHHHHHHHHHCTTC-CSEEEEGGGGCCS-----SCSSCCCHHHHC--C-HHHH---HHHHHHHHHHHH
T ss_pred h--cCCEEEEcCHHHHHHHHHhcCCC-cCEEEEehhhccC-----CCCcCCCCCCCc--h-HHHH---HHHHHHHHHHHH
Confidence 8 99999999999999999999984 4599999999874 3 9999999876 6 9999 999999999999
Q ss_pred HHHhhh
Q psy10839 171 DTLGIE 176 (232)
Q Consensus 171 ~~L~~~ 176 (232)
++|+++
T Consensus 148 ~~l~~~ 153 (158)
T 3rof_A 148 DYIVKD 153 (158)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999876
No 9
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=100.00 E-value=8.8e-46 Score=311.64 Aligned_cols=149 Identities=20% Similarity=0.216 Sum_probs=139.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYK 95 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~ 95 (232)
+++|||||+||+|||||||+||++++.++|+ .|+|+||||.+++ |+++||.++++|+++|||++|+||+|+++++.+
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~--~~~v~SAGt~~~~-G~~~dp~a~~vl~e~Gidishrar~lt~~d~~~ 110 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL--NVNVRSAGVFASP-NGKATPHAVEALFEKHIALNHVSSPLTEELMES 110 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC--CEEEEEEETTCCT-TCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHH
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC--cEEEEeeecCCcC-CCCCCHHHHHHHHHcCCCchhccCcCCHHHcCC
Confidence 5799999999999999999999999998885 5999999999985 999999999999999999999999999999999
Q ss_pred ccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10839 96 FDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTLGI 175 (232)
Q Consensus 96 aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L~~ 175 (232)
|||||+||+.|++.|.+.+|. ..+|+++|++|.+. ..|+||||||++.+. |+++ +++|+++|+.|++.|++
T Consensus 111 ~DlIltMd~~~~~~l~~~~P~-~~~Kv~lL~~~~~~----~~~dVpDPy~g~~~~-F~~v---~d~I~~~i~~ll~~l~~ 181 (184)
T 4etn_A 111 ADLVLAMTHQHKQIIASQFGR-YRDKVFTLKEYVTG----SHGDVLDPFGGSIDI-YKQT---RDELEELLRQLAKQLKK 181 (184)
T ss_dssp CSEEEESSHHHHHHHHHHCGG-GGGGEEEHHHHHHS----SCCCCCCCTTCCHHH-HHHH---HHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCcHHHHHHHHHCCC-ccceEEEhhhhccC----CCCccCCCCCCCHHH-HHHH---HHHHHHHHHHHHHHHHh
Confidence 999999999999999999997 57899999999842 479999999999999 9999 99999999999999876
Q ss_pred h
Q psy10839 176 E 176 (232)
Q Consensus 176 ~ 176 (232)
.
T Consensus 182 ~ 182 (184)
T 4etn_A 182 D 182 (184)
T ss_dssp -
T ss_pred c
Confidence 3
No 10
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=2.8e-45 Score=307.45 Aligned_cols=146 Identities=22% Similarity=0.365 Sum_probs=134.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHH-HHcCCCC-CCceeccCccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERC-EMYGLDT-EHVVREITKDD 92 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL-~e~GIdl-~hrsr~lt~~d 92 (232)
.++||||||+||||||||||++||+++++.|. .|+|+||||.+++ |.+++|.++++| +++|||+ +|+||+|+++|
T Consensus 33 ~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~--~~~v~SAGt~~~~-g~~~~~~a~~~l~~e~Gidis~h~sr~l~~~d 109 (180)
T 4egs_A 33 GSMRVLFVCTGNTCRSPMAEGIFNAKSKALGK--DWEAKSAGVFAPE-GFPASSEAVEVLKKEYGIDISDHRAKSLREED 109 (180)
T ss_dssp -CCEEEEEESSSSSHHHHHHHHHHHHHHHTTC--CCEEEEEETTCCT-TCCCCHHHHHHHHHHHCCCCTTCCCCBCCSHH
T ss_pred CCeEEEEEeCCCcccCHHHHHHHHHHHHhcCC--ceEEEEeeecCcC-CCCCChHHHHHHHHHcCcCcccCcccccChhh
Confidence 47899999999999999999999998876654 6999999999984 889999999998 6799999 79999999999
Q ss_pred cCCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 93 FYKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDT 172 (232)
Q Consensus 93 l~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~ 172 (232)
+++|||||+||++|++.|...+|. ...|+++|++|.+. +|+||||||++.+. |+++ +++|+++|+.|+++
T Consensus 110 ~~~~DlIi~Md~~~~~~l~~~~p~-~~~kv~~l~~~~~~-----~~dI~DPy~~~~e~-f~~v---~~~I~~~i~~ll~k 179 (180)
T 4egs_A 110 LKGADLVLAMAFSHKRSLVSQYPE-YADKIFTIKEFVGL-----EGDVEDPYGMPLEV-YKKT---AEELSGLIDKLIEK 179 (180)
T ss_dssp HHHCSEEEESSHHHHHHHHHHSTT-SGGGEEETTTTTTC-----CSCCCCCTTCCHHH-HHHH---HHHHHHHHHHHHHH
T ss_pred CcCCCEEEEcCHHHHHHHHHhCcc-cccceeehhhcccc-----CCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHc
Confidence 999999999999999999999998 68899999999864 79999999999999 9999 99999999999987
Q ss_pred H
Q psy10839 173 L 173 (232)
Q Consensus 173 L 173 (232)
|
T Consensus 180 L 180 (180)
T 4egs_A 180 L 180 (180)
T ss_dssp C
T ss_pred C
Confidence 5
No 11
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=100.00 E-value=2.7e-44 Score=292.98 Aligned_cols=141 Identities=22% Similarity=0.356 Sum_probs=129.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~ 94 (232)
+++|||||+||+|||||||++|++++ .+|+|+||||.+ +.|+++||+++++|+++|||+ +|+|++|+++++.
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~------~~~~v~SAGt~~-~~g~~~~p~a~~~l~e~Gid~~~~~ar~l~~~~~~ 80 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL------PSKKINSAGVGA-LVDHTADESAIRVAEKNGLCLKGHRGTKFTSALAR 80 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC------TTSEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHT
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc------CCCEEEeccccC-CCCCCCCHHHHHHHHHcCCCccCCcccCCCHHHhc
Confidence 35999999999999999999999997 249999999998 589999999999999999999 7999999999999
Q ss_pred CccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10839 95 KFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTLG 174 (232)
Q Consensus 95 ~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L~ 174 (232)
+|||||+||+.|++.+...+|. ..+|++++.+|.+ ..+|||||+++.+. |+++ +++|+++|+.|++.|+
T Consensus 81 ~~DlIi~m~~~~~~~l~~~~p~-~~~kv~~l~~~~~------~~~i~DP~~~~~~~-f~~~---~~~i~~~i~~ll~~l~ 149 (150)
T 2wmy_A 81 QYDLLLVMEYSHLEQISRIAPE-ARGKTMLFGHWLD------SKEIPDPYRMSDEA-FDSV---YQLLEQASKRWAEKLG 149 (150)
T ss_dssp TCSEEEESCHHHHHHHHHHCGG-GGGGEEETTTTSS------SCCCCCCTTCCHHH-HHHH---HHHHHHHHHHHHHHTC
T ss_pred cCCEEEEcCHHHHHHHHHhCCC-ccceEeehHHhCC------CCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHHHh
Confidence 9999999999999999999997 5789999887753 25999999999999 9999 9999999999999874
No 12
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=100.00 E-value=5e-44 Score=289.97 Aligned_cols=140 Identities=31% Similarity=0.533 Sum_probs=128.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~ 94 (232)
+++|||||+||+|||||||++|++++. +.|+|+||||.+++.|+++||+++++|+++|||+ +|+|++|+++++.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~-----~~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s~~~sr~l~~~~~~ 78 (146)
T 1p8a_A 4 KKAVLFVCLGNICRSPACEGICRDMVG-----DKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDISKQRARQITKADFS 78 (146)
T ss_dssp CCCEEEESSSSCSSSTTHHHHHHHHHS-----SCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCCCCCCCCCCSHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHHhcC-----CCEEEEeeecCCcccCCCCCHHHHHHHHHcCCChhcCeeccCCHhHhh
Confidence 468999999999999999999999993 4599999999998889999999999999999999 7999999999999
Q ss_pred CccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10839 95 KFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTLG 174 (232)
Q Consensus 95 ~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L~ 174 (232)
+|||||+||+.|++.|.+.+|....+|++++++ . |+|||||+++ +. |+++ +++|+++|+.|++.|+
T Consensus 79 ~~DlIi~m~~~~~~~l~~~~p~~~~~kv~~l~~--------~-~~i~DP~~~~-~~-f~~~---~~~I~~~v~~ll~~l~ 144 (146)
T 1p8a_A 79 KFDVIAALDQSILSDINSMKPSNCRAKVVLFNP--------P-NGVDDPYYSS-DG-FPTM---FASISKEMKPFLTEHG 144 (146)
T ss_dssp SCSEEEESSHHHHHHHHHHCCSSCSCEEEECSC--------T-TSSCCCSSSS-SS-HHHH---HHHHHHTTHHHHHHHT
T ss_pred cCCEEEEeChHHHHHHHHHCCcccCCeEEEeCC--------C-CCCCCCCCCC-HH-HHHH---HHHHHHHHHHHHHHHh
Confidence 999999999999999999999733678887643 0 7999999988 88 9999 9999999999999874
No 13
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=100.00 E-value=1.5e-43 Score=294.12 Aligned_cols=150 Identities=22% Similarity=0.333 Sum_probs=128.9
Q ss_pred hhcccccc--CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CC
Q psy10839 7 VWGGFLFE--GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EH 83 (232)
Q Consensus 7 ~~~~~~~~--~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~h 83 (232)
||.+.-|. .+++|||||+||+|||||||+||++++ .+|+|+||||.+ +.|.++||+++++|+++|||+ +|
T Consensus 15 ~~~~~~~~~~mm~~VLFVCtgNicRSpmAEal~r~~~------~~~~v~SAGt~~-~~g~~~~p~a~~vl~e~Gid~s~~ 87 (168)
T 2wja_A 15 VPRGSHMAKLMFDSILVICTGNICRSPIGERLLRRLL------PSKKINSAGVGA-LVDHAADESAIRVAEKNGLCLKGH 87 (168)
T ss_dssp -CCCSHHHHHHCSEEEEEESSSSSHHHHHHHHHHHHS------TTSEEEEEETTC-CTTCCCCHHHHHC---CCCCCTTC
T ss_pred CcchHhHHhhccCEEEEEcCCcHHHHHHHHHHHHHhc------CCeEEEeeecCC-CCCCCCCHHHHHHHHHcCCCcccC
Confidence 45554443 245999999999999999999999997 249999999998 579999999999999999999 79
Q ss_pred ceeccCccccCCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q psy10839 84 VVREITKDDFYKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGY 163 (232)
Q Consensus 84 rsr~lt~~dl~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~ 163 (232)
+|++|+++++.+|||||+||+.|++.+...+|. ..+|++++.+|++ ..+|||||+++.++ |+++ +++|+
T Consensus 88 ~sr~l~~~~~~~~DlIitM~~~~~~~l~~~~p~-~~~kv~~l~~w~~------~~~I~DP~~~~~~~-f~~v---~~~I~ 156 (168)
T 2wja_A 88 RGTKFTSALARQYDLLLVMEYSHLEQISRIAPE-ARGKTMLFGHWLD------SKEIPDPYRMSDEA-FDSV---YQLLE 156 (168)
T ss_dssp CCCBCCHHHHTTCSEEEESSHHHHHHHHHHCTT-TGGGEEETTCC---------CCCCCCTTCCHHH-HHHH---HHHHH
T ss_pred ccCCCChhHhccCCEEEEcCHHHHHHHHHhCCc-ccceEEeeHhhCC------CCCCCCCCCCCHHH-HHHH---HHHHH
Confidence 999999999999999999999999999999997 5789999887753 25999999999999 9999 99999
Q ss_pred HHHHHHHHHHh
Q psy10839 164 WYLRGFLDTLG 174 (232)
Q Consensus 164 ~~v~~ll~~L~ 174 (232)
++|+.|++.|+
T Consensus 157 ~~v~~ll~~l~ 167 (168)
T 2wja_A 157 QASKRWAEKLG 167 (168)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 14
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=100.00 E-value=2.8e-43 Score=292.15 Aligned_cols=142 Identities=26% Similarity=0.397 Sum_probs=131.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~ 94 (232)
+++|||||+||+|||||||++|++++ .+|+|+||||.+ +.|.++||+|+++|+++|||+ +|+||+|+++++.
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~------~~~~v~SAGt~~-~~g~~~~p~a~~vl~e~Gid~s~~~sr~l~~~~~~ 94 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYH------PELKVESAGLGA-LVGKGADPTAISVAAEHQLSLEGHCARQISRRLCR 94 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC------TTCEEEEEETTC-CTTCCCCHHHHHHHHHTTCCCTTCCCCBCCHHHHH
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhc------CCeEEEeeecCC-CCCCCCCHHHHHHHHHcCCCccCCcCccCCHHHhc
Confidence 45999999999999999999999997 249999999998 579999999999999999999 7999999999999
Q ss_pred CccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10839 95 KFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTLG 174 (232)
Q Consensus 95 ~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L~ 174 (232)
+|||||+||+.|++.+...+|. ..+|++++.+|++ ..+|||||+++.++ |+++ +++|+++|+.|++.|.
T Consensus 95 ~~DlIitM~~~~~~~l~~~~p~-~~~kv~~l~~w~~------~~~I~DP~~~~~~~-f~~v---~~~I~~~v~~ll~~l~ 163 (167)
T 2fek_A 95 NYDLILTMEKRHIERLCEMAPE-MRGKVMLFGHWDN------ECEIPDPYRKSRET-FAAV---YTLLERSARQWAQALN 163 (167)
T ss_dssp HSSEEEESCHHHHHHHHHHCGG-GGGGEEEGGGGTT------TCCCCCCTTSCHHH-HHHH---HHHHHHHHHHHHHHHH
T ss_pred cCCEEEEcCHHHHHHHHHhCCc-ccceEEehHHhCC------CCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 5789999988864 25999999999999 9999 9999999999999985
Q ss_pred h
Q psy10839 175 I 175 (232)
Q Consensus 175 ~ 175 (232)
+
T Consensus 164 ~ 164 (167)
T 2fek_A 164 A 164 (167)
T ss_dssp S
T ss_pred h
Confidence 3
No 15
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=100.00 E-value=3.2e-41 Score=270.07 Aligned_cols=128 Identities=20% Similarity=0.268 Sum_probs=113.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~ 94 (232)
|++|||||+||+|||||||++|++++ ++.|+|+||||. |.++||+++++|+++|||+ +|+|++|+++++.
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~-----~~~~~v~SAGt~----g~~~~~~a~~~l~e~Gid~s~~~sr~l~~~~~~ 74 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLG-----AGKIAVTSCGLE----SSRVHPTAIAMMEEVGIDISGQTSDPIENFNAD 74 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHS-----BTTEEEEEECCT----TSSCCHHHHHHHHTTTCCCSSCCCCCGGGCCGG
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHc-----CCCEEEEcccCC----CCCCCHHHHHHHHHcCCCcccCccccCChHHhc
Confidence 45899999999999999999999998 357999999998 6789999999999999999 7999999999999
Q ss_pred CccEEEEecCCcHHHHHHhCCC-CCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 95 KFDYIIATDETDLSFLRLEAPP-DSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLDTL 173 (232)
Q Consensus 95 ~aDlII~Md~~~~~~L~~~~P~-~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~~L 173 (232)
+|||||+||+.+ +.+|. ...++++ .+|+|||||+++.+. |+++ +++|+++|+.|++.|
T Consensus 75 ~~DlIi~md~~~-----~~~p~~~~~~~~~------------~~~~i~DP~~~~~~~-f~~~---~~~i~~~v~~ll~~l 133 (134)
T 2l17_A 75 DYDVVISLCGCG-----VNLPPEWVTQEIF------------EDWQLEDPDGQSLEV-FRTV---RGQVKERVENLIAKI 133 (134)
T ss_dssp GCSEEEECSCSC-----SCCCTHHHHSSEE------------EECCCCCCTTCCHHH-HHHH---HHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCchh-----hhCcccccCCCee------------ccCCCCCCCCCCHHH-HHHH---HHHHHHHHHHHHHHc
Confidence 999999996655 36772 1345542 169999999999999 9999 999999999999876
No 16
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=100.00 E-value=6.2e-41 Score=267.47 Aligned_cols=128 Identities=25% Similarity=0.281 Sum_probs=113.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
..++|||||+||+|||||||++|++++ +.+++|+||||.+. ++||+++++|+++|||+ +|+|++|+++++
T Consensus 2 ~~~~VLFVC~gN~cRSpmAEa~~~~~~-----~~~~~v~SAGt~~~----~~~p~a~~~l~~~Gid~s~~~ar~l~~~~~ 72 (131)
T 1jf8_A 2 DKKTIYFISTGNSARSQMAEGWGKEIL-----GEGWNVYSAGIETH----GVNPKAIEAMKEVDIDISNHTSDLIDNDIL 72 (131)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHS-----TTTEEEEEEESSCC----CCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred CCCEEEEEcCCcchHHHHHHHHHHHhc-----CCCEEEEcCcCCCC----CCCHHHHHHHHHcCCCcccCccccCChHHh
Confidence 456899999999999999999999997 35799999999982 79999999999999999 799999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLD 171 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~ 171 (232)
.+|||||+||+ +. .+.+|. ..++++++ +|+||||||++.+. |+++ +++|+++|+.|++
T Consensus 73 ~~~D~Ii~m~~-~~---~~~~p~-~~~~~~~~-----------~~~i~DP~g~~~~~-f~~~---~~~i~~~~~~l~~ 130 (131)
T 1jf8_A 73 KQSDLVVTLCS-DA---DNNCPI-LPPNVKKE-----------HWGFDDPAGKEWSE-FQRV---RDEIKLAIEKFKL 130 (131)
T ss_dssp HHCSEEEECSH-HH---HHHSCC-CCTTSEEE-----------ECCCCCCTTSCHHH-HHHH---HHHHHHHHHHHHT
T ss_pred ccCCEEEEcCc-HH---HhhCcC-CCCCcEEE-----------EecCCCcCCCCHHH-HHHH---HHHHHHHHHHHHh
Confidence 99999999984 33 567886 45676654 48999999988888 9999 9999999999875
No 17
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.8e-41 Score=272.95 Aligned_cols=128 Identities=18% Similarity=0.237 Sum_probs=114.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
.+++|||||+||+|||||||+||++++ .++|+|+|||+.+ |.++||+++++|+++|||+ +|+||+|+++++
T Consensus 19 ~~~~VLFVC~gN~cRSpmAEal~~~~~-----~~~~~v~SAGt~~---g~~~dp~a~~vl~e~Gidis~h~ar~l~~~~~ 90 (148)
T 3rh0_A 19 HMKSVLFVCVGNGGKSQMAAALAQKYA-----SDSVEIHSAGTKP---AQGLNQLSVESIAEVGADMSQGIPKAIDPELL 90 (148)
T ss_dssp -CCEEEEEESSSSSHHHHHHHHHHHHC-----CTTSEEEEEESSC---CSSCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhc-----CCCEEEEecccCC---CCCCCHHHHHHHHHcCCCcCCCeeeECCHHHh
Confidence 367999999999999999999999998 4679999999987 7899999999999999999 799999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLD 171 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~ 171 (232)
.+|||||+||+.|. +.+|. ..++++ .+|+||||||++.+. |+++ +++|+++|+.|++
T Consensus 91 ~~~DlIitM~~~~~----~~~p~-~~~k~~------------~~w~VpDPy~~~~~~-F~~v---~d~I~~~v~~Ll~ 147 (148)
T 3rh0_A 91 RTVDRVVILGDDAQ----VDMPE-SAQGAL------------ERWSIEEPDAQGMER-MRIV---RDQIDNRVQALLA 147 (148)
T ss_dssp HHCSEEEEESSSCC----CCCCT-TCCSEE------------EEECCCCCSCCHHHH-HHHH---HHHHHHHHHHHHC
T ss_pred cCCCEEEEecChHH----hhCcc-CCCCEe------------ecCCcCCCCCCCHHH-HHHH---HHHHHHHHHHHHh
Confidence 99999999998885 34776 345652 159999999999999 9999 9999999999874
No 18
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=100.00 E-value=5.9e-40 Score=263.81 Aligned_cols=130 Identities=25% Similarity=0.304 Sum_probs=111.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
.+++|||||+||+|||||||+||++++ ++.|+|+||||.+. ++||+++++|+++|||+ +|+|++|+++++
T Consensus 2 ~~~~VLFVC~gN~cRSpmAEai~~~~~-----~~~~~v~SAGt~~~----~~~p~a~~~l~~~Gid~s~~~sr~l~~~~~ 72 (139)
T 1jl3_A 2 ENKIIYFLCTGNSCRSQMAEGWAKQYL-----GDEWKVYSAGIEAH----GLNPNAVKAMKEVGIDISNQTSDIIDSDIL 72 (139)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHS-----CTTEEEEEEESSCC----CCCHHHHHHHHHTTCCCTTCCCCBCCHHHH
T ss_pred CCCeEEEEcCCchHHHHHHHHHHHHhC-----CCCEEEEcCcCCCC----CCCHHHHHHHHHcCCCcccCccCcCCHHHh
Confidence 345899999999999999999999997 45799999999982 69999999999999999 799999999999
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCC---CC---chHHHHHHHHHHHHHHHHHH
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFF---LK---TKELINALDDIIHRGYWYLR 167 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~---~~---~~~~fe~~~~~~~~I~~~v~ 167 (232)
.+|||||+||+ |. .+.+|. ..+++.++ +|+|||||+ ++ .+. |+++ +++|+++|+
T Consensus 73 ~~~D~Ii~m~~-~~---~~~~p~-~~~~~~~~-----------~~~i~DP~~~~g~~~e~~~~-f~~~---~~~I~~~i~ 132 (139)
T 1jl3_A 73 NNADLVVTLCG-DA---ADKCPM-TPPHVKRE-----------HWGFDDPARAQGTEEEKWAF-FQRV---RDEIGNRLK 132 (139)
T ss_dssp TTCSEEEECSH-HH---HHHCCC-CCTTSEEE-----------ECCCCCGGGCCSCHHHHHHH-HHHH---HHHHHHHHH
T ss_pred hcCCEEEEeCc-hH---HhhCCC-CCCCceEE-----------eccCCCCcccCCChHHHHHH-HHHH---HHHHHHHHH
Confidence 99999999976 43 566886 35565544 589999995 33 367 9999 999999999
Q ss_pred HHHHHH
Q psy10839 168 GFLDTL 173 (232)
Q Consensus 168 ~ll~~L 173 (232)
.|++..
T Consensus 133 ~ll~~~ 138 (139)
T 1jl3_A 133 EFAETG 138 (139)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 998753
No 19
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=100.00 E-value=7e-40 Score=258.99 Aligned_cols=122 Identities=21% Similarity=0.274 Sum_probs=109.3
Q ss_pred eEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCC-CceeccCccccCCc
Q psy10839 18 SVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTE-HVVREITKDDFYKF 96 (232)
Q Consensus 18 ~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~-hrsr~lt~~dl~~a 96 (232)
+|||||+||+|||||||++|++++. +|+|+||||.+ |.++||+++++|+++||| + |+||+|+++++.+|
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~------~~~v~SAGt~~---g~~~~~~a~~~l~e~Gid-s~~~sr~l~~~~~~~~ 70 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK------SWKAESAGVEK---AERVDETVKRLLAERGLK-AKEKPRTVDEVNLDDF 70 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS------SCCEEEEESSC---CSSCCHHHHHHHHTTTCC-CCSSCCBGGGSCGGGC
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC------CEEEEecCCCC---CCCCCHHHHHHHHHcCcC-CCCccccCChhHhcCC
Confidence 6999999999999999999999872 68999999997 778999999999999999 7 89999999999999
Q ss_pred cEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q psy10839 97 DYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRGFLD 171 (232)
Q Consensus 97 DlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ll~ 171 (232)
||||+||+. +.+|. ..+++.+ .+|+|||||+++.+. |+++ +++|+++|+.|++
T Consensus 71 D~Ii~m~~~------~~~p~-~~~~~~~-----------~~~~i~DP~~~~~~~-f~~~---~~~i~~~v~~ll~ 123 (124)
T 1y1l_A 71 DLIVTVCEE------SSCVV-LPTDKPV-----------TRWHIENPAGKDEGT-YRRV---LAEIEERVKKLVG 123 (124)
T ss_dssp SCEEEEECS------SCCBC-CSCSSCE-----------EEEECCCCTTTCTTH-HHHH---HHHHHHHHHHHTT
T ss_pred CEEEEecCc------ccCcC-CCCCeee-----------cceecCCCCCCCHHH-HHHH---HHHHHHHHHHHHh
Confidence 999999975 46786 4556543 268999999999999 9999 9999999999874
No 20
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.5e-38 Score=273.12 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=115.7
Q ss_pred cccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceecc
Q psy10839 10 GFLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREI 88 (232)
Q Consensus 10 ~~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~l 88 (232)
|-.++.+++|||||+||+|||||||++|++++. +.++|+|||+.+ |+++||.++++|+++|||+ +|+|++|
T Consensus 75 ~~~~~~~~~VLFVCtgN~cRSpmAEal~~~~~~-----~~~~v~SAGt~~---g~~~dp~a~~vl~e~Gidis~~~sr~l 146 (213)
T 3t38_A 75 GKVASPVPQVLFICVHNAGRSQIASALLSHYAG-----SSVEVRSAGSLP---ASEIHPLVLEILSERGVNISDAFPKPL 146 (213)
T ss_dssp TCSSSCCCEEEEEESSSSSHHHHHHHHHHHHHG-----GGCEEEEEESSC---CSSCCHHHHHHHHHTTCCCTTCCCCBC
T ss_pred CcccCCCCEEEEECCCchhHHHHHHHHHHHhcc-----CceEEEecccCC---CCCCCHHHHHHHHHcCCCcccCcCCcC
Confidence 556778899999999999999999999999983 579999999974 7899999999999999999 7999999
Q ss_pred CccccCCccEEEEecCCcHHHHHHhCCCCCCccEEEecccccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q psy10839 89 TKDDFYKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGTFTRKAKFQGPSDLPDPFFLKTKELINALDDIIHRGYWYLRG 168 (232)
Q Consensus 89 t~~dl~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~f~~~~~~~~~~dIpDP~~~~~~~~fe~~~~~~~~I~~~v~~ 168 (232)
+++++.+|||||+|+..+ .+|. ..+|.+ .+|+||||||++.+. |+++ +++|+++|+.
T Consensus 147 ~~~~~~~~DlIitMd~~~------~~P~-~~gk~~------------~~w~IpDPy~~~~~~-F~~v---~d~Ie~~v~~ 203 (213)
T 3t38_A 147 TDDVIRASDYVITMGCGD------VCPM-YPGKHY------------LDWELADPSDEGEDK-IQEI---IEEIDGRIRE 203 (213)
T ss_dssp CHHHHHHCSEEEESSCCS------CSCC-CSSSEE------------EESCC-----CCCCC-HHHH---HHHHHHHHHH
T ss_pred CHHHhccCCEEEEecCcc------cCcc-ccCCcc------------CCCCCCCCCCCCHHH-HHHH---HHHHHHHHHH
Confidence 999999999999998765 3676 345543 269999999999999 9999 9999999999
Q ss_pred HHHHHhhh
Q psy10839 169 FLDTLGIE 176 (232)
Q Consensus 169 ll~~L~~~ 176 (232)
|+++|...
T Consensus 204 Ll~~L~~~ 211 (213)
T 3t38_A 204 LWKSIQLS 211 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99998653
No 21
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=95.95 E-value=0.03 Score=42.36 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=35.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeec
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIG 58 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~ 58 (232)
.+++||+||.+...-|.|++.=+++.+.+.|+. +.|...++.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~--~~V~~~~~~ 61 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP--VELIQCRVN 61 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC--EEEEEECTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe--EEEEEecHH
Confidence 357899999999999999888888999988885 667766654
No 22
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=95.81 E-value=0.012 Score=44.72 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=56.1
Q ss_pred CCeEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 16 KKSVLFL--CRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 16 ~~~ILFV--CtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
+|+|+-| |...+.-|-||..-|++.+++.|.. +.|+.-|.... . ..||++++
T Consensus 2 ~mkivaVtaCptGiAhTymAAeaLekaA~~~G~~--ikVEtqgs~g~--~----------------------n~Lt~~~I 55 (106)
T 2m1z_A 2 KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNL--IKVETQGATGI--E----------------------NELTEKDV 55 (106)
T ss_dssp CCEEEEEEECSSCHHHHHHHHHHHHHHHHHHTCE--EEEEEEETTEE--S----------------------SCCCHHHH
T ss_pred CccEEEEEECCCcHHHHHHHHHHHHHHHHHCCCE--EEEEEecCccc--c----------------------CCCCHHHH
Confidence 3688888 9999999999999999999999985 88888776432 1 47888899
Q ss_pred CCccEEEEecCCcHHHH
Q psy10839 94 YKFDYIIATDETDLSFL 110 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L 110 (232)
.+||+||...+...+..
T Consensus 56 ~~AD~VIia~d~~v~~~ 72 (106)
T 2m1z_A 56 NIGEVVIFAVDTKVRNK 72 (106)
T ss_dssp HHCSEEEEEESSCCSTH
T ss_pred hhCCEEEEeccccccch
Confidence 99999999988654333
No 23
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=94.56 E-value=0.063 Score=40.23 Aligned_cols=43 Identities=12% Similarity=0.090 Sum_probs=36.3
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeecc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGW 59 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~ 59 (232)
|.+++||++|.+...-|.|++ =+++.++++|++ ++|...++..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~-k~~~~~~~~gi~--~~i~a~~~~~ 43 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVS-KMRAQAEKYEVP--VIIEAFPETL 43 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHH-HHHHHHHHSCCS--EEEEEECSSS
T ss_pred CCCcEEEEECCCchhHHHHHH-HHHHHHHHCCCC--eEEEEecHHH
Confidence 567899999999999998888 788889999986 7887777654
No 24
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=94.27 E-value=0.053 Score=41.41 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=54.4
Q ss_pred CeEE--EEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 17 KSVL--FLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 17 ~~IL--FVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
++|+ .-|...+..+-||...|++.+++.|.. +.|+.-|.... -..||++++.
T Consensus 6 mkIvaVTaCptGiAHTyMAAeaL~~aA~~~G~~--ikVEtqGs~G~------------------------~n~Lt~~~I~ 59 (111)
T 2kyr_A 6 KKLIALCACPMGLAHTFMAAQALEEAAVEAGYE--VKIETQGADGI------------------------QNRLTAQDIA 59 (111)
T ss_dssp CEEEEEEEESSCHHHHHHHHHHHHHHHHHTSSE--EEEEEEETTEE------------------------ESCCCHHHHH
T ss_pred ccEEEEEcCCCcHHHHHHHHHHHHHHHHHCCCe--EEEEecCCCCc------------------------CCCCCHHHHH
Confidence 5676 679999999999999999999999985 88888876542 1488999999
Q ss_pred CccEEEEecCCcH
Q psy10839 95 KFDYIIATDETDL 107 (232)
Q Consensus 95 ~aDlII~Md~~~~ 107 (232)
+||+||...+...
T Consensus 60 ~Ad~VIiA~d~~v 72 (111)
T 2kyr_A 60 EATIIIHSVAVTP 72 (111)
T ss_dssp HCSEEEEEESSCC
T ss_pred hCCEEEEEeCCCc
Confidence 9999999987653
No 25
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=93.46 E-value=0.1 Score=39.46 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=52.7
Q ss_pred CeEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 17 KSVLFL--CRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 17 ~~ILFV--CtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
++|+.| |...+..+-||...|++.+++.|.. +.|+.-|.... -..||++++.
T Consensus 3 ~kivaVTaCptGiAhTymAaeaL~~aA~~~G~~--ikVEtqGs~G~------------------------~n~Lt~~~I~ 56 (106)
T 2r48_A 3 AKLLAITSCPNGIAHTYMAAENLQKAADRLGVS--IKVETQGGIGV------------------------ENKLTEEEIR 56 (106)
T ss_dssp CEEEEEEECSSCSHHHHHHHHHHHHHHHHHTCE--EEEEEEETTEE------------------------ESCCCHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHHHHCCCe--EEEEecCCCCc------------------------cCCCCHHHHH
Confidence 455555 7889999999999999999999885 88887775432 1478999999
Q ss_pred CccEEEEecCCcH
Q psy10839 95 KFDYIIATDETDL 107 (232)
Q Consensus 95 ~aDlII~Md~~~~ 107 (232)
+||+||...+...
T Consensus 57 ~Ad~VIiA~d~~v 69 (106)
T 2r48_A 57 EADAIIIAADRSV 69 (106)
T ss_dssp HCSEEEEEESSCC
T ss_pred hCCEEEEEeCCcc
Confidence 9999999988654
No 26
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=93.08 E-value=0.093 Score=39.71 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=50.5
Q ss_pred CeEEEE--cCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 17 KSVLFL--CRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 17 ~~ILFV--CtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
|+|+.| |...+..+-||...|++.+++.|.. +.|+.-|.... -..||++++.
T Consensus 3 ~kivaVTaCptGiAhTymAaeaL~~aA~~~G~~--ikVEtqGs~G~------------------------~n~Lt~~~I~ 56 (106)
T 2r4q_A 3 AKILAVTACPTGIAHTFMAADALKEKAKELGVE--IKVETNGSSGI------------------------KHKLTAQEIE 56 (106)
T ss_dssp CCEEEEEECSCC--CHHHHHHHHHHHHHHHTCC--EEEEEEETTEE------------------------ESCCCHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHHHHHHCCCe--EEEEecCCCCc------------------------cCCCCHHHHH
Confidence 355554 7889999999999999999999986 88887775432 1478999999
Q ss_pred CccEEEEecCCcH
Q psy10839 95 KFDYIIATDETDL 107 (232)
Q Consensus 95 ~aDlII~Md~~~~ 107 (232)
+||+||...+...
T Consensus 57 ~Ad~VIiA~d~~v 69 (106)
T 2r4q_A 57 DAPAIIVAADKQV 69 (106)
T ss_dssp HCSCEEEEESSCC
T ss_pred hCCEEEEEeCCcc
Confidence 9999999988654
No 27
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=92.80 E-value=0.12 Score=43.15 Aligned_cols=91 Identities=19% Similarity=0.214 Sum_probs=58.7
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC--CCCCCCH-----------HHHHH-------
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD--VGKGMDP-----------RAKER------- 73 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~--~G~~~dp-----------~Ai~v------- 73 (232)
..+.++..||..|.=||--|+.+|++. ++.|.|.||...- .|..++. ..-.-
T Consensus 7 ~~~l~~avVCaSN~NRSMEaH~~L~k~--------G~~V~SfGTGs~VrLPGps~d~PNvY~FgT~Y~~iy~dL~~kd~~ 78 (198)
T 3p9y_A 7 PSKLAVAVVDSSNMNRSMEAHNFLAKK--------GFNVRSYGTGERVKLPGMAFDKPNVYEFGTKYEDIYRDLESKDKE 78 (198)
T ss_dssp TTCCEEEEEESSSSSHHHHHHHHHHHT--------TCEEEEEECSSSEEECCSSTTCCEEECTTCCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEcCCCCcccHHHHHHHHhC--------CCceeecCCCceeEcCCCCCCCCCccCCCCcHHHHHHHHHHhhHH
Confidence 456899999999999999999998774 4789999997531 2433322 12222
Q ss_pred -HHHcCC-C-------CCCceeccCccccCCccEEEEecCCcHHHHHHh
Q psy10839 74 -CEMYGL-D-------TEHVVREITKDDFYKFDYIIATDETDLSFLRLE 113 (232)
Q Consensus 74 -L~e~GI-d-------l~hrsr~lt~~dl~~aDlII~Md~~~~~~L~~~ 113 (232)
-.+.|| . +.-.|..+... -..||+|||.++.-++.+.+.
T Consensus 79 lY~~NGiL~MLdRNr~iK~~PERfQ~~-~~~fDvIiTcEERvfD~Vved 126 (198)
T 3p9y_A 79 FYTQNGLLHMLDRNRRIKKCPERFQDT-KEQFDIIVTVEERVYDLVVMH 126 (198)
T ss_dssp HHHHTSHHHHHHHHHHHCSSCCBGGGC-CCCCSEEEESSHHHHHHHHHH
T ss_pred HHHHcCcHHHHhcCccccCCccchhcc-CCCcCEEEEeechhHHHHHHH
Confidence 223343 1 11244444322 246999999998877776553
No 28
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=92.57 E-value=0.14 Score=38.25 Aligned_cols=42 Identities=21% Similarity=0.227 Sum_probs=34.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeec
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIG 58 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~ 58 (232)
+++||+||.+...-|.|++.-+++.+.+.|+. .+.|...++.
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~-~~~i~~~~~~ 59 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVS-DIESASCSVG 59 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCC-CEEEEEECHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCC-eEEEEEeeHH
Confidence 57899999999999999999999999988873 2556655543
No 29
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=91.78 E-value=0.16 Score=42.82 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=57.4
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC--CCCCCC-----------HHHHHHH--------
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD--VGKGMD-----------PRAKERC-------- 74 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~--~G~~~d-----------p~Ai~vL-------- 74 (232)
++++..||..|.=||--|+.+|++. ++.|.|-||...- .|..++ ...-+-|
T Consensus 25 ~Lr~avVCaSN~NRSMEAH~~L~k~--------Gf~V~SfGTGs~VkLPGps~d~PnvY~FgT~Y~~iy~dL~~kd~~lY 96 (214)
T 4h3k_B 25 PLRVAVVSSSNQNRSMEAHNILSKR--------GFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQMYNDLLRKDKELY 96 (214)
T ss_dssp -CEEEEEESSSSSHHHHHHHHHHHT--------TCEEEEEECSSSEEECCSSTTCCEEECTTSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCcchhHHHHHHHHHC--------CCceEeecCCCccCCCCCCCCCCCccCCCCCHHHHHHHHHhHCHHHH
Confidence 5889999999999999999999764 4789999997520 232222 2222222
Q ss_pred HHcCC--------CCCCceeccCccccCCccEEEEecCCcHHHHHH
Q psy10839 75 EMYGL--------DTEHVVREITKDDFYKFDYIIATDETDLSFLRL 112 (232)
Q Consensus 75 ~e~GI--------dl~hrsr~lt~~dl~~aDlII~Md~~~~~~L~~ 112 (232)
.+.|| .+.-.|..+.. --..||+|||.++.-++.+.+
T Consensus 97 ~~NGlL~MLdRN~~iK~~PER~Q~-~~~~fDvViTcEERvfD~Vve 141 (214)
T 4h3k_B 97 TQNGILHMLDRNKRIKPRPERFQN-CKDLFDLILTCEERVYDQVVE 141 (214)
T ss_dssp HHTSHHHHHHHHHTTCSSCCBGGG-CCCCCSEEEESSHHHHHHHHH
T ss_pred HHcCcHHHHhCCccccCCChhhhc-cCCCccEEEEccchhHHHHHH
Confidence 22343 22224444432 235699999999988887765
No 30
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=91.06 E-value=0.26 Score=37.90 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCC-CCcEEEEEeee
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQ-TNEWIVESAGI 57 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl-~~~i~V~SAG~ 57 (232)
.+++||+||.+...-|.|++.-+++.+.+.|+ . +.|....+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi~~--~~V~~~~i 53 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQ--ISVTNSAI 53 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHHHHHHHHHHHTTCTT--SEEEECCT
T ss_pred cccEEEEECCCcHHHHHHHHHHHHHHHHHCCCce--EEEEEeeH
Confidence 46799999999999999999999999988887 4 55554443
No 31
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=89.86 E-value=0.43 Score=35.50 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeec
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIG 58 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~ 58 (232)
.|+||+||.+...-| |...=+++.+.+.|+. ++|...++.
T Consensus 4 ~mkIlvvC~~G~~TS-ll~~kl~~~~~~~gi~--~~i~~~~~~ 43 (109)
T 2l2q_A 4 SMNILLVCGAGMSTS-MLVQRIEKYAKSKNIN--ATIEAIAET 43 (109)
T ss_dssp CEEEEEESSSSCSSC-HHHHHHHHHHHHHTCS--EEEEEECST
T ss_pred ceEEEEECCChHhHH-HHHHHHHHHHHHCCCC--eEEEEecHH
Confidence 468999999999999 6666888888888885 677666654
No 32
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=89.04 E-value=1.3 Score=33.13 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeee
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGI 57 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~ 57 (232)
++++||++|.+..--|-++.. +++.++++|++ +++.+.+.
T Consensus 5 ~~mkIlL~C~aGmSTsllv~k-m~~~a~~~gi~--v~i~a~~~ 44 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANA-INEGANLTEVR--VIANSGAY 44 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHH-HHHHHHHHTCS--EEEEEEET
T ss_pred cCceEEEECCCCCCHHHHHHH-HHHHHHHCCCc--eEEEEcch
Confidence 578999999999888888874 55667788875 66666443
No 33
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.96 E-value=1.5 Score=38.31 Aligned_cols=70 Identities=14% Similarity=0.122 Sum_probs=42.6
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCcc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKD 91 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~ 91 (232)
+.+++|+||..|.+..|.+|+.+.+ +|. .+.+.= .. ..+...+.|++.|+++ +|.+..+..
T Consensus 2 ~~~~~i~~iGiGg~Gms~~A~~L~~-----~G~--~V~~~D--~~-------~~~~~~~~L~~~gi~v~~g~~~~~l~~- 64 (326)
T 3eag_A 2 NAMKHIHIIGIGGTFMGGLAAIAKE-----AGF--EVSGCD--AK-------MYPPMSTQLEALGIDVYEGFDAAQLDE- 64 (326)
T ss_dssp -CCCEEEEESCCSHHHHHHHHHHHH-----TTC--EEEEEE--SS-------CCTTHHHHHHHTTCEEEESCCGGGGGS-
T ss_pred CCCcEEEEEEECHHHHHHHHHHHHh-----CCC--EEEEEc--CC-------CCcHHHHHHHhCCCEEECCCCHHHcCC-
Confidence 3568999999999999999974432 222 233221 11 1122456788889887 565433311
Q ss_pred ccCCccEEEEe
Q psy10839 92 DFYKFDYIIAT 102 (232)
Q Consensus 92 dl~~aDlII~M 102 (232)
.++|+||..
T Consensus 65 --~~~d~vV~S 73 (326)
T 3eag_A 65 --FKADVYVIG 73 (326)
T ss_dssp --CCCSEEEEC
T ss_pred --CCCCEEEEC
Confidence 358888874
No 34
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.22 E-value=3.5 Score=34.63 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=51.8
Q ss_pred ccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCc
Q psy10839 11 FLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITK 90 (232)
Q Consensus 11 ~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~ 90 (232)
|+....++||+|..| .+|+.-++.+++. +..+.|.| + .+++...+..++.++.+ ..+.+.+
T Consensus 26 fl~L~gk~VLVVGgG-----~va~~ka~~Ll~~---GA~VtVva----p-----~~~~~l~~l~~~~~i~~--i~~~~~~ 86 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGG-----TIATRRIKGFLQE---GAAITVVA----P-----TVSAEINEWEAKGQLRV--KRKKVGE 86 (223)
T ss_dssp EECCTTCCEEEECCS-----HHHHHHHHHHGGG---CCCEEEEC----S-----SCCHHHHHHHHTTSCEE--ECSCCCG
T ss_pred EEEcCCCEEEEECCC-----HHHHHHHHHHHHC---CCEEEEEC----C-----CCCHHHHHHHHcCCcEE--EECCCCH
Confidence 455567899999988 5677777777643 34577765 2 25566555555444543 4456677
Q ss_pred cccCCccEEEEecCCc
Q psy10839 91 DDFYKFDYIIATDETD 106 (232)
Q Consensus 91 ~dl~~aDlII~Md~~~ 106 (232)
+|+..+|+||+.++..
T Consensus 87 ~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 87 EDLLNVFFIVVATNDQ 102 (223)
T ss_dssp GGSSSCSEEEECCCCT
T ss_pred hHhCCCCEEEECCCCH
Confidence 8999999999988653
No 35
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=82.54 E-value=2 Score=35.83 Aligned_cols=78 Identities=8% Similarity=0.045 Sum_probs=49.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC-----
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT----- 89 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt----- 89 (232)
|+||+|+..|+- ..++++++.+.+ .++.++-+++... +.++.+.+.++++||+. ...++.+.
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~-----~~~~~~i~~Vvs~----~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~ 68 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIES-----GKVNASIELVISD----NPKAYAIERCKKHNVECKVIQRKEFPSKKEF 68 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHT-----TSSCEEEEEEEES----CTTCHHHHHHHHHTCCEEECCGGGSSSHHHH
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHh-----CCCCCeEEEEEeC----CCChHHHHHHHHcCCCEEEeCcccccchhhh
Confidence 368999977765 578888888763 2232344455432 35677888999999997 43344332
Q ss_pred -cc---cc--CCccEEEEecCC
Q psy10839 90 -KD---DF--YKFDYIIATDET 105 (232)
Q Consensus 90 -~~---dl--~~aDlII~Md~~ 105 (232)
++ .+ .+.|+||+..-.
T Consensus 69 ~~~~~~~l~~~~~Dliv~a~y~ 90 (216)
T 2ywr_A 69 EERMALELKKKGVELVVLAGFM 90 (216)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC
T ss_pred hHHHHHHHHhcCCCEEEEeCch
Confidence 11 11 368999998753
No 36
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=81.20 E-value=1.7 Score=36.70 Aligned_cols=89 Identities=13% Similarity=0.010 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC----
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT---- 89 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt---- 89 (232)
.|+||+|+..|+- ..++++++.+.+. ++ +.+| .++... ++++.+.+.++++||+. ...++.+.
T Consensus 21 ~~~rI~~l~SG~g---~~~~~~l~~l~~~-~~--~~~I--~~Vvt~----~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~ 88 (229)
T 3auf_A 21 HMIRIGVLISGSG---TNLQAILDGCREG-RI--PGRV--AVVISD----RADAYGLERARRAGVDALHMDPAAYPSRTA 88 (229)
T ss_dssp TCEEEEEEESSCC---HHHHHHHHHHHTT-SS--SEEE--EEEEES----STTCHHHHHHHHTTCEEEECCGGGSSSHHH
T ss_pred CCcEEEEEEeCCc---HHHHHHHHHHHhC-CC--CCeE--EEEEcC----CCchHHHHHHHHcCCCEEEECcccccchhh
Confidence 3579999988774 5788999887742 11 2333 344432 35667888999999997 33444432
Q ss_pred --cc---c--cCCccEEEEecCCcH--HHHHHhCC
Q psy10839 90 --KD---D--FYKFDYIIATDETDL--SFLRLEAP 115 (232)
Q Consensus 90 --~~---d--l~~aDlII~Md~~~~--~~L~~~~P 115 (232)
++ . -.+.|+||+..-... ..+.+.++
T Consensus 89 ~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~ 123 (229)
T 3auf_A 89 FDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFP 123 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHST
T ss_pred ccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhcc
Confidence 11 1 136899999875322 33445544
No 37
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=79.17 E-value=2.9 Score=28.69 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+++ |. ..+.+. +|+..|
T Consensus 40 ~~~~ivv~C~~g-~rs~~aa~~L~~~----G~-~~v~~l-GG~~~w 78 (85)
T 2jtq_A 40 KNDTVKVYCNAG-RQSGQAKEILSEM----GY-THVENA-GGLKDI 78 (85)
T ss_dssp TTSEEEEEESSS-HHHHHHHHHHHHT----TC-SSEEEE-EETTTC
T ss_pred CCCcEEEEcCCC-chHHHHHHHHHHc----CC-CCEEec-cCHHHH
Confidence 457899999875 4999888777654 55 467777 898776
No 38
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=77.38 E-value=0.46 Score=38.04 Aligned_cols=44 Identities=25% Similarity=0.377 Sum_probs=33.9
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCC-CcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQT-NEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~-~~i~V~SAG~~~~ 60 (232)
..|+|.|.+...||+.|..+|.+.+.+.|++ .++.+..+|+..|
T Consensus 105 ~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW 149 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRW 149 (169)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHH
T ss_pred CeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHH
Confidence 5899999988899999988887665554531 3577888998776
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=76.97 E-value=3.5 Score=35.96 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=46.7
Q ss_pred ccCCCeEEEEc--CCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 13 FEGKKSVLFLC--RDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 13 ~~~~~~ILFVC--tgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
||..++|||+. .|...|..+++ +++++-++.+ .++-+..+|... .|.+..+...+.|.+.|+|.
T Consensus 1 ~~~~m~ilf~GDv~G~~G~~~l~~-~l~~lr~~~~--~d~vi~Ngen~~--gG~g~~~~~~~~ln~~G~Da 66 (281)
T 1t71_A 1 MMNSIKFIFLGDVYGKAGRNIIKN-NLAQLKSKYQ--ADLVIVNAENTT--HGKGLSLKHYEFLKEAGVNY 66 (281)
T ss_dssp CCCCCEEEEECEEBHHHHHHHHHT-THHHHHHHHT--CSEEEEECTBTT--TTSSCCHHHHHHHHHHTCCE
T ss_pred CcceEEEEEECCcCChHHHHHHHH-HHHHHHHhcC--CCEEEEcCCCCC--CCCCcCHHHHHHHHhcCCCE
Confidence 46779999997 66667777766 3444444433 357777788765 36678899999999999995
No 40
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=75.81 E-value=7 Score=34.51 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=44.3
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC-CCC--C-CCCHHHHHHHHHcCCCC-CCceec
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW-DVG--K-GMDPRAKERCEMYGLDT-EHVVRE 87 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~-~~G--~-~~dp~Ai~vL~e~GIdl-~hrsr~ 87 (232)
||++++|+|..+. .+|-..|+.+++. +++|.--=+.|. ..| . ...+.+.+.++++||++ .. ..
T Consensus 4 m~~~mrivf~Gt~-----~fa~~~L~~L~~~-----~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~--~~ 71 (318)
T 3q0i_A 4 MSQSLRIVFAGTP-----DFAARHLAALLSS-----EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQP--EN 71 (318)
T ss_dssp ---CCEEEEECCS-----HHHHHHHHHHHTS-----SSEEEEEECCCC---------CCCHHHHHHHHTTCCEECC--SC
T ss_pred cccCCEEEEEecC-----HHHHHHHHHHHHC-----CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEcc--Cc
Confidence 4678999999886 4666677777742 233322222221 011 1 12345678889999997 32 22
Q ss_pred cCcc------ccCCccEEEEecCC
Q psy10839 88 ITKD------DFYKFDYIIATDET 105 (232)
Q Consensus 88 lt~~------dl~~aDlII~Md~~ 105 (232)
+..+ .-.++|+||+..-.
T Consensus 72 ~~~~~~~~~l~~~~~Dliv~~~y~ 95 (318)
T 3q0i_A 72 FKSDESKQQLAALNADLMVVVAYG 95 (318)
T ss_dssp SCSHHHHHHHHTTCCSEEEESSCC
T ss_pred CCCHHHHHHHHhcCCCEEEEeCcc
Confidence 3211 12468999998764
No 41
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=75.02 E-value=6.8 Score=36.29 Aligned_cols=67 Identities=9% Similarity=0.167 Sum_probs=40.5
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCcc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKD 91 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~ 91 (232)
...++|+||..|.+..|.+|+.+.++ | .+|. |.-. . ..+ ..+.|++.|+.+ +|.+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~-----G----~~V~--~~D~---~--~~~-~~~~l~~~gi~~~~g~~~~----- 77 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANE-----G----YQIS--GSDL---A--PNS-VTQHLTALGAQIYFHHRPE----- 77 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHT-----T----CEEE--EECS---S--CCH-HHHHHHHTTCEEESSCCGG-----
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhC-----C----CeEE--EEEC---C--CCH-HHHHHHHCCCEEECCCCHH-----
Confidence 34579999999999999988654432 2 2333 2211 1 223 345688888886 45543
Q ss_pred ccCCccEEEEe
Q psy10839 92 DFYKFDYIIAT 102 (232)
Q Consensus 92 dl~~aDlII~M 102 (232)
.+..+|+||.-
T Consensus 78 ~~~~~d~vV~S 88 (494)
T 4hv4_A 78 NVLDASVVVVS 88 (494)
T ss_dssp GGTTCSEEEEC
T ss_pred HcCCCCEEEEC
Confidence 34567887754
No 42
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=74.55 E-value=5.5 Score=28.82 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD 61 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~ 61 (232)
+...|+|+|.+. -||..|..+|+.+ |.. . .+..+|+..|.
T Consensus 55 ~~~~ivvyC~~G-~rs~~aa~~L~~~----G~~-~-~~l~GG~~~W~ 94 (110)
T 2k0z_A 55 KDKKVLLHCRAG-RRALDAAKSMHEL----GYT-P-YYLEGNVYDFE 94 (110)
T ss_dssp SSSCEEEECSSS-HHHHHHHHHHHHT----TCC-C-EEEESCGGGTT
T ss_pred CCCEEEEEeCCC-chHHHHHHHHHHC----CCC-E-EEecCCHHHHH
Confidence 456899999776 5998888777654 554 4 78889998873
No 43
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=74.42 E-value=4 Score=37.98 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=43.2
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
.+++++++||.|.++=|.|=++=++++. +..+ .-.+++. +.+...++
T Consensus 396 ~~~~~~~vVC~~GigtS~lL~~~L~~~F-----~~~~--~~~~is~--------------------------~e~~~~~~ 442 (485)
T 3sqn_A 396 AQTMTAYFLFQGEPAWKAFLQQELAAYL-----GTRV--KLQAIEY--------------------------VELSQLTL 442 (485)
T ss_dssp CCSEEEEEECCSCHHHHHHHHHHHHHHH-----CTTE--EEEECCT--------------------------TTCCCCCC
T ss_pred cccceEEEECCCchhHHHHHHHHHHHhc-----CCce--EeecccH--------------------------HHHhhccc
Confidence 3467899999999999999999999998 4333 3334433 45555566
Q ss_pred CCccEEEEec
Q psy10839 94 YKFDYIIATD 103 (232)
Q Consensus 94 ~~aDlII~Md 103 (232)
.++|+||+.-
T Consensus 443 ~~~D~ViStv 452 (485)
T 3sqn_A 443 NEADIIISNF 452 (485)
T ss_dssp CTTCEEEESS
T ss_pred cCCCEEEEcc
Confidence 7899999986
No 44
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=74.13 E-value=5.7 Score=37.13 Aligned_cols=26 Identities=8% Similarity=-0.091 Sum_probs=19.2
Q ss_pred cccCCCeEEEEcCCCchHHHHHHHHH
Q psy10839 12 LFEGKKSVLFLCRDNYMRSPMIKSLF 37 (232)
Q Consensus 12 ~~~~~~~ILFVCtgNicRSpmAEail 37 (232)
+|-+.++|.||..|.+..|.+|+.+.
T Consensus 15 ~~~~~~~i~~iGiGg~Gms~lA~~l~ 40 (524)
T 3hn7_A 15 LYFQGMHIHILGICGTFMGSLALLAR 40 (524)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH
T ss_pred eeecCCEEEEEEecHhhHHHHHHHHH
Confidence 34467899999999999999997543
No 45
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=73.81 E-value=2.1 Score=32.57 Aligned_cols=40 Identities=18% Similarity=0.424 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+.. ||..|..+|+.+ |. .++.+..+|+..|
T Consensus 81 ~~~~ivvyC~~G~-rS~~aa~~L~~~----G~-~~v~~l~GG~~~W 120 (137)
T 1qxn_A 81 PEKPVVVFCKTAA-RAALAGKTLREY----GF-KTIYNSEGGMDKW 120 (137)
T ss_dssp TTSCEEEECCSSS-CHHHHHHHHHHH----TC-SCEEEESSCHHHH
T ss_pred CCCeEEEEcCCCc-HHHHHHHHHHHc----CC-cceEEEcCcHHHH
Confidence 4568999998775 999998888764 44 4688888998765
No 46
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=72.25 E-value=3.6 Score=28.82 Aligned_cols=37 Identities=11% Similarity=0.246 Sum_probs=29.5
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
..|+|+|.+. .||..|..+|+++ |. . +.+..+|+..|
T Consensus 54 ~~ivvyC~~g-~rs~~a~~~L~~~----G~-~-v~~l~GG~~~W 90 (94)
T 1wv9_A 54 RPLLLVCEKG-LLSQVAALYLEAE----GY-E-AMSLEGGLQAL 90 (94)
T ss_dssp SCEEEECSSS-HHHHHHHHHHHHH----TC-C-EEEETTGGGCC
T ss_pred CCEEEEcCCC-ChHHHHHHHHHHc----CC-c-EEEEcccHHHH
Confidence 7899999876 4999998888765 44 3 78888998876
No 47
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=71.25 E-value=2.2 Score=30.38 Aligned_cols=40 Identities=10% Similarity=0.269 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD 61 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~ 61 (232)
+...|+|+|.+. .||..|..+|+++ |. ++.+..+|+..|.
T Consensus 55 ~~~~ivvyC~~g-~rs~~a~~~L~~~----G~--~v~~l~GG~~~W~ 94 (100)
T 3foj_A 55 DNETYYIICKAG-GRSAQVVQYLEQN----GV--NAVNVEGGMDEFG 94 (100)
T ss_dssp TTSEEEEECSSS-HHHHHHHHHHHTT----TC--EEEEETTHHHHHC
T ss_pred CCCcEEEEcCCC-chHHHHHHHHHHC----CC--CEEEecccHHHHH
Confidence 346899999766 7899888777654 54 5778888988763
No 48
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=71.18 E-value=4.8 Score=30.05 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+.+ |. .++.+..+|+..|
T Consensus 81 ~~~~ivvyC~~G-~rs~~aa~~L~~~----G~-~~v~~l~GG~~~W 120 (129)
T 1tq1_A 81 QSDNIIVGCQSG-GRSIKATTDLLHA----GF-TGVKDIVGGYSAW 120 (129)
T ss_dssp TTSSEEEEESSC-SHHHHHHHHHHHH----HC-CSEEEEECCHHHH
T ss_pred CCCeEEEECCCC-cHHHHHHHHHHHc----CC-CCeEEeCCcHHHH
Confidence 456799999976 4999998888775 34 4688888998765
No 49
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=70.01 E-value=5 Score=31.76 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=30.9
Q ss_pred CeEEEEcCCCchHHH--HHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRSP--MIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRSp--mAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
|+||++|.||.-|+= +.-.+.+.+.+...+++++++.-+|+.+.
T Consensus 1 m~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~~ 46 (162)
T 1cfz_A 1 MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGM 46 (162)
T ss_dssp CCEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCCG
T ss_pred CCEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCHH
Confidence 479999999998872 33333444433346677899999998753
No 50
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=67.86 E-value=4.5 Score=30.99 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCch-HHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYM-RSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNic-RSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+..| ||..|..+|+.+ |. ++.+..+|+..|
T Consensus 71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~----G~--~v~~l~GG~~~W 111 (144)
T 3nhv_A 71 KEKVIITYCWGPACNGATKAAAKFAQL----GF--RVKELIGGIEYW 111 (144)
T ss_dssp TTSEEEEECSCTTCCHHHHHHHHHHHT----TC--EEEEEESHHHHH
T ss_pred CCCeEEEEECCCCccHHHHHHHHHHHC----CC--eEEEeCCcHHHH
Confidence 35689999999885 999998877654 55 488888888765
No 51
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=67.66 E-value=3.2 Score=31.08 Aligned_cols=40 Identities=23% Similarity=0.471 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+.+ |. .++.+..+|+..|
T Consensus 85 ~~~~ivvyC~~G-~rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 124 (139)
T 2hhg_A 85 EDKKFVFYCAGG-LRSALAAKTAQDM----GL-KPVAHIEGGFGAW 124 (139)
T ss_dssp SSSEEEEECSSS-HHHHHHHHHHHHH----TC-CSEEEETTHHHHH
T ss_pred CCCeEEEECCCC-hHHHHHHHHHHHc----CC-CCeEEecCCHHHH
Confidence 457899999987 4999888887765 44 4688888998766
No 52
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=67.17 E-value=3.1 Score=29.66 Aligned_cols=40 Identities=13% Similarity=0.317 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD 61 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~ 61 (232)
+...|+|+|.+. -||..|..+|+.+ |. ++.+..+|+..|.
T Consensus 55 ~~~~iv~yC~~g-~rs~~a~~~L~~~----G~--~v~~l~GG~~~W~ 94 (103)
T 3eme_A 55 KNEIYYIVCAGG-VRSAKVVEYLEAN----GI--DAVNVEGGMHAWG 94 (103)
T ss_dssp TTSEEEEECSSS-SHHHHHHHHHHTT----TC--EEEEETTHHHHHC
T ss_pred CCCeEEEECCCC-hHHHHHHHHHHHC----CC--CeEEeCCCHHHHH
Confidence 446899999876 6899888777654 54 5778888988763
No 53
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=66.73 E-value=5.6 Score=29.27 Aligned_cols=44 Identities=9% Similarity=0.163 Sum_probs=30.3
Q ss_pred CCeEEEEcCC--------CchHHHHHHHHHHHHHH---hc-CCCCcEEEEEeeecc
Q psy10839 16 KKSVLFLCRD--------NYMRSPMIKSLFKEMLA---MA-NQTNEWIVESAGIGW 59 (232)
Q Consensus 16 ~~~ILFVCtg--------NicRSpmAEailr~l~~---~~-gl~~~i~V~SAG~~~ 59 (232)
+++.+|||+| ..|.+.=|+.+++++-+ .. |+.+.+.|...|-..
T Consensus 2 ~~~~I~VC~~~r~~~~~~~~C~~~Ga~~l~~~l~~~l~~~~g~~~~v~v~~~~ClG 57 (110)
T 1m2d_A 2 EFKHVFVCVQDRPPGHPQGSCAQRGSREVFQAFMEKIQTDPQLFMTTVITPTGCMN 57 (110)
T ss_dssp -CEEEEEECCCCCTTCTTCCTGGGTHHHHHHHHHHHHHHCHHHHTTEEEEEESCCS
T ss_pred CceEEEECCCCCCCCCCCCCchhcCHHHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 3578999999 68987767777666544 33 544568888777643
No 54
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=66.09 E-value=3.7 Score=35.45 Aligned_cols=51 Identities=22% Similarity=0.212 Sum_probs=39.1
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHH
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKER 73 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~v 73 (232)
|...+|-||=.||+.-|+|.+-++.+.+. -.++++...|+++. +.|.-++.
T Consensus 1 mmvvKiGiiKlGNigts~~idl~LDErAd----RedI~vrv~gsGaK-----m~pe~~~~ 51 (283)
T 1qv9_A 1 MTVAKAIFIKCGNLGTSMMMDMLLDERAD----REDVEFRVVGTSVK-----MDPECVEA 51 (283)
T ss_dssp -CCEEEEEEECSCCHHHHHTTGGGSTTSC----CSSEEEEEEECTTC-----CSHHHHHH
T ss_pred CeeEEEEEEEecccchHHHHHHHHHhhhc----cCCceEEEeccCCC-----CCHHHHHH
Confidence 34679999999999999999998877764 25789999998663 55554433
No 55
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=65.75 E-value=3.9 Score=29.35 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+.. ||..|..+|+.. |. .++.+..+|+..|
T Consensus 57 ~~~~ivvyc~~g~-rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 96 (108)
T 1gmx_A 57 FDTPVMVMCYHGN-SSKGAAQYLLQQ----GY-DVVYSIDGGFEAW 96 (108)
T ss_dssp TTSCEEEECSSSS-HHHHHHHHHHHH----TC-SSEEEETTHHHHH
T ss_pred CCCCEEEEcCCCc-hHHHHHHHHHHc----CC-ceEEEecCCHHHH
Confidence 4567999998765 999998887765 44 4677888888765
No 56
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=64.95 E-value=11 Score=33.43 Aligned_cols=81 Identities=10% Similarity=-0.022 Sum_probs=43.8
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-C--C-ceecc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-E--H-VVREI 88 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~--h-rsr~l 88 (232)
+|.+|||+|.++ +-+|..+++.+.+. +.+|.--=+.|...+ ..++ +.+.++++||+. . . +.+..
T Consensus 19 ~~~~mrIvf~G~-----~~fa~~~L~~L~~~-----~~~i~~Vvt~pd~~~-~~~~-v~~~A~~~gIpv~~~~~~~~~~~ 86 (329)
T 2bw0_A 19 YFQSMKIAVIGQ-----SLFGQEVYCHLRKE-----GHEVVGVFTVPDKDG-KADP-LGLEAEKDGVPVFKYSRWRAKGQ 86 (329)
T ss_dssp --CCCEEEEECC-----HHHHHHHHHHHHHT-----TCEEEEEEECCCCSS-CCCH-HHHHHHHHTCCEEECSCCEETTE
T ss_pred cCCCCEEEEEcC-----cHHHHHHHHHHHHC-----CCeEEEEEeCCCcCC-CCCH-HHHHHHHcCCCEEecCccccccc
Confidence 345689999953 46777788887753 223322222332212 2444 447889999997 2 1 11111
Q ss_pred -Ccc---c--cCCccEEEEecCC
Q psy10839 89 -TKD---D--FYKFDYIIATDET 105 (232)
Q Consensus 89 -t~~---d--l~~aDlII~Md~~ 105 (232)
.++ . -.+.|+||+..-.
T Consensus 87 ~~~~~~~~l~~~~~Dliv~a~y~ 109 (329)
T 2bw0_A 87 ALPDVVAKYQALGAELNVLPFCS 109 (329)
T ss_dssp ECHHHHHHHHTTCCSEEEESSCS
T ss_pred ccHHHHHHHHhcCCCEEEEeehh
Confidence 111 1 2367999998754
No 57
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=62.80 E-value=5 Score=32.74 Aligned_cols=74 Identities=12% Similarity=0.164 Sum_probs=41.2
Q ss_pred cccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCH-HHHHHHHHcCCCCCCceecc
Q psy10839 10 GFLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDP-RAKERCEMYGLDTEHVVREI 88 (232)
Q Consensus 10 ~~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp-~Ai~vL~e~GIdl~hrsr~l 88 (232)
...+|.+++|.||..||..+ .+|.+ +.+ .|. .+.+ +.. .++ .+.+..+++|+... .-
T Consensus 17 ~~~~m~mmkI~IIG~G~mG~-~la~~----l~~-~g~--~V~~----v~~------r~~~~~~~l~~~~g~~~~----~~ 74 (220)
T 4huj_A 17 NLYFQSMTTYAIIGAGAIGS-ALAER----FTA-AQI--PAII----ANS------RGPASLSSVTDRFGASVK----AV 74 (220)
T ss_dssp CTTGGGSCCEEEEECHHHHH-HHHHH----HHH-TTC--CEEE----ECT------TCGGGGHHHHHHHTTTEE----EC
T ss_pred chhhhcCCEEEEECCCHHHH-HHHHH----HHh-CCC--EEEE----EEC------CCHHHHHHHHHHhCCCcc----cC
Confidence 45667789999999998764 34444 332 232 2332 111 122 23334455676531 11
Q ss_pred CccccCCccEEEEecCC
Q psy10839 89 TKDDFYKFDYIIATDET 105 (232)
Q Consensus 89 t~~dl~~aDlII~Md~~ 105 (232)
..+.+.++|+||.....
T Consensus 75 ~~~~~~~aDvVilavp~ 91 (220)
T 4huj_A 75 ELKDALQADVVILAVPY 91 (220)
T ss_dssp CHHHHTTSSEEEEESCG
T ss_pred hHHHHhcCCEEEEeCCh
Confidence 23446889999988764
No 58
>2auv_A Potential NAD-reducing hydrogenase subunit; thioredoxin, thiordoxin-like, oxidoreductase; NMR {Desulfovibrio fructosovorans}
Probab=62.72 E-value=1.7 Score=30.47 Aligned_cols=30 Identities=7% Similarity=-0.002 Sum_probs=24.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMAN 45 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~g 45 (232)
..+.+|||+|..|.+.=|+.+++++-++.+
T Consensus 5 g~~~I~VC~g~~C~~~Ga~~v~~~l~~~l~ 34 (85)
T 2auv_A 5 GKYPISVCMGTACFVKGADKVVHAFKEQLK 34 (85)
T ss_dssp CSBCEECCCCHHHHTTTHHHHHHHHHHHHC
T ss_pred CCEEEEECCCchHHHcCHHHHHHHHHHHhC
Confidence 456899999999999989999888766544
No 59
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=62.47 E-value=13 Score=32.14 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=45.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYK 95 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~ 95 (232)
|++|-||..||-.+ |||..++++ |. .+.| |+ .++...+.+.+.|......+. +....
T Consensus 3 M~kIgfIGlG~MG~-~mA~~L~~~-----G~--~v~v-------~d----r~~~~~~~l~~~Ga~~a~s~~----e~~~~ 59 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-PMATNLLKA-----GY--LLNV-------FD----LVQSAVDGLVAAGASAARSAR----DAVQG 59 (300)
T ss_dssp CCEEEEECCSTTHH-HHHHHHHHT-----TC--EEEE-------EC----SSHHHHHHHHHTTCEECSSHH----HHHTT
T ss_pred cCEEEEeeehHHHH-HHHHHHHhC-----CC--eEEE-------Ec----CCHHHHHHHHHcCCEEcCCHH----HHHhc
Confidence 56899999999884 888777643 22 2333 22 568888888888865422222 34678
Q ss_pred ccEEEEecCC
Q psy10839 96 FDYIIATDET 105 (232)
Q Consensus 96 aDlII~Md~~ 105 (232)
+|+||+|=..
T Consensus 60 ~dvv~~~l~~ 69 (300)
T 3obb_A 60 ADVVISMLPA 69 (300)
T ss_dssp CSEEEECCSC
T ss_pred CCceeecCCc
Confidence 9999988643
No 60
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=61.56 E-value=6.2 Score=30.09 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+.+ |. .++.+..+|+..|
T Consensus 79 ~~~~ivvyC~~G-~rS~~aa~~L~~~----G~-~~v~~l~GG~~~w 118 (148)
T 2fsx_A 79 HERPVIFLCRSG-NRSIGAAEVATEA----GI-TPAYNVLDGFEGH 118 (148)
T ss_dssp --CCEEEECSSS-STHHHHHHHHHHT----TC-CSEEEETTTTTCC
T ss_pred CCCEEEEEcCCC-hhHHHHHHHHHHc----CC-cceEEEcCChhhh
Confidence 456799999876 4898888777654 55 4688899999766
No 61
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=61.38 E-value=23 Score=32.26 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=42.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKDD 92 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~d 92 (232)
..++|+||..|.+..|.+|+.+.+. | ..|. |.-.. ..+. .+.|++.|+.+ +|.+. .
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~-----G----~~V~--~~D~~-----~~~~-~~~l~~~gi~~~~g~~~~-----~ 74 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNE-----G----YQIS--GSDIA-----DGVV-TQRLAQAGAKIYIGHAEE-----H 74 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH-----T----CEEE--EEESC-----CSHH-HHHHHHTTCEEEESCCGG-----G
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhC-----C----CEEE--EECCC-----CCHH-HHHHHhCCCEEECCCCHH-----H
Confidence 3568999999999999999876432 2 2333 22211 1233 35678889887 56553 2
Q ss_pred cCCccEEEEec
Q psy10839 93 FYKFDYIIATD 103 (232)
Q Consensus 93 l~~aDlII~Md 103 (232)
+..+|+||+-.
T Consensus 75 ~~~a~~vv~s~ 85 (475)
T 1p3d_A 75 IEGASVVVVSS 85 (475)
T ss_dssp GTTCSEEEECT
T ss_pred cCCCCEEEECC
Confidence 35678877653
No 62
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=59.13 E-value=7.7 Score=29.84 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=30.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCC-CcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQT-NEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~-~~i~V~SAG~~~~ 60 (232)
..|+|.|...--||+.|..++...+.+.|.. .++.+..+|+..|
T Consensus 69 ~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W 113 (152)
T 2j6p_A 69 ELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAF 113 (152)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHH
T ss_pred CEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHH
Confidence 3577779534459999885555555666762 4688888998776
No 63
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=59.11 E-value=18 Score=32.91 Aligned_cols=70 Identities=14% Similarity=0.099 Sum_probs=41.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKDD 92 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~d 92 (232)
+.++|+||..|.+..|. |+. |.+. | ..+.+.=.. +. ..+...+.|++.|+.+ +|.+.. .
T Consensus 8 ~~k~v~viG~G~sG~s~-A~~-l~~~----G--~~V~~~D~~--~~-----~~~~~~~~L~~~gi~~~~g~~~~~----~ 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAA-ARL-LAKL----G--AIVTVNDGK--PF-----DENPTAQSLLEEGIKVVCGSHPLE----L 68 (451)
T ss_dssp TTCEEEEECCTTTHHHH-HHH-HHHT----T--CEEEEEESS--CG-----GGCHHHHHHHHTTCEEEESCCCGG----G
T ss_pred CCCEEEEEeeCHHHHHH-HHH-HHhC----C--CEEEEEeCC--cc-----cCChHHHHHHhCCCEEEECCChHH----h
Confidence 46799999999999984 543 3332 2 234433221 10 1234456788999987 565432 3
Q ss_pred cCC-ccEEEEec
Q psy10839 93 FYK-FDYIIATD 103 (232)
Q Consensus 93 l~~-aDlII~Md 103 (232)
+.. +|+||.--
T Consensus 69 ~~~~~d~vv~sp 80 (451)
T 3lk7_A 69 LDEDFCYMIKNP 80 (451)
T ss_dssp GGSCEEEEEECT
T ss_pred hcCCCCEEEECC
Confidence 344 89988753
No 64
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=59.10 E-value=3 Score=31.00 Aligned_cols=40 Identities=8% Similarity=-0.044 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCch-HHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYM-RSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNic-RSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+..+ +|..|..+|+.+ |. .+.+..+|+..|
T Consensus 70 ~~~~ivvyC~~g~r~~s~~a~~~L~~~----G~--~v~~l~GG~~~W 110 (124)
T 3flh_A 70 PAKTYVVYDWTGGTTLGKTALLVLLSA----GF--EAYELAGALEGW 110 (124)
T ss_dssp TTSEEEEECSSSSCSHHHHHHHHHHHH----TC--EEEEETTHHHHH
T ss_pred CCCeEEEEeCCCCchHHHHHHHHHHHc----CC--eEEEeCCcHHHH
Confidence 35689999998875 388887777665 44 277778888776
No 65
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=58.53 E-value=7.1 Score=32.14 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=39.0
Q ss_pred cccccCCCeEEEEcCCCchHH-------HHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCC
Q psy10839 10 GFLFEGKKSVLFLCRDNYMRS-------PMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLD 80 (232)
Q Consensus 10 ~~~~~~~~~ILFVCtgNicRS-------pmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GId 80 (232)
...+|.+++|-++|..+.+.. .+|+.+-+.+++ .++.|.|+| . .+++..+.+.+.+.|-.
T Consensus 17 ~~~~~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~-----~G~~vVsGg-~-----~GiM~aa~~gAl~~GG~ 83 (195)
T 1rcu_A 17 LYFQGHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAK-----KGYLVFNGG-R-----DGVMELVSQGVREAGGT 83 (195)
T ss_dssp ------CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHH-----TTCEEEECC-S-----SHHHHHHHHHHHHTTCC
T ss_pred CcccCCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHH-----CCCEEEeCC-H-----HHHHHHHHHHHHHcCCc
Confidence 345666778999999876322 588888888874 467888854 2 24778787777776644
No 66
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=58.11 E-value=23 Score=32.57 Aligned_cols=67 Identities=9% Similarity=0.131 Sum_probs=42.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKDD 92 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~d 92 (232)
..++|+||..|.+..|.+|+.+.+ .| ..|. |.-.. ..+. .+.|++.|+.+ +|.+. .
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~-----~G----~~V~--~~D~~-----~~~~-~~~l~~~gi~~~~g~~~~-----~ 75 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLAN-----EG----YQIS--GSDLA-----PNPV-TQQLMNLGATIYFNHRPE-----N 75 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHH-----TT----CEEE--EECSS-----CCHH-HHHHHHTTCEEESSCCGG-----G
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHh-----CC----CeEE--EECCC-----CCHH-HHHHHHCCCEEECCCCHH-----H
Confidence 357899999999999999986543 22 3343 32211 2333 35678889887 56543 2
Q ss_pred cCCccEEEEec
Q psy10839 93 FYKFDYIIATD 103 (232)
Q Consensus 93 l~~aDlII~Md 103 (232)
+..+|+||+-.
T Consensus 76 ~~~a~~vv~s~ 86 (491)
T 2f00_A 76 VRDASVVVVSS 86 (491)
T ss_dssp GTTCSEEEECT
T ss_pred cCCCCEEEECC
Confidence 45678877643
No 67
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=57.12 E-value=23 Score=29.16 Aligned_cols=88 Identities=9% Similarity=-0.027 Sum_probs=51.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC-----
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT----- 89 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt----- 89 (232)
|++|.++..|+- ..++++++.+.+. ++ +.+| .++... ++++.+.+.++++||+. ...++.+.
T Consensus 3 m~ki~vl~sG~g---~~~~~~l~~l~~~-~l--~~~I--~~Vit~----~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~ 70 (212)
T 3av3_A 3 MKRLAVFASGSG---TNFQAIVDAAKRG-DL--PARV--ALLVCD----RPGAKVIERAARENVPAFVFSPKDYPSKAAF 70 (212)
T ss_dssp CEEEEEECCSSC---HHHHHHHHHHHTT-CC--CEEE--EEEEES----STTCHHHHHHHHTTCCEEECCGGGSSSHHHH
T ss_pred CcEEEEEEECCc---HHHHHHHHHHHhC-CC--CCeE--EEEEeC----CCCcHHHHHHHHcCCCEEEeCcccccchhhh
Confidence 357777766663 4788888887632 11 2333 344432 35668888999999997 33333332
Q ss_pred -cc---c--cCCccEEEEecCCc--HHHHHHhCC
Q psy10839 90 -KD---D--FYKFDYIIATDETD--LSFLRLEAP 115 (232)
Q Consensus 90 -~~---d--l~~aDlII~Md~~~--~~~L~~~~P 115 (232)
++ . -.+.|+||+..-.. -..+.+.+|
T Consensus 71 ~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~ 104 (212)
T 3av3_A 71 ESEILRELKGRQIDWIALAGYMRLIGPTLLSAYE 104 (212)
T ss_dssp HHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTT
T ss_pred HHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhc
Confidence 11 1 13679999987532 123445544
No 68
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=56.95 E-value=6.9 Score=28.34 Aligned_cols=39 Identities=13% Similarity=0.319 Sum_probs=26.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|++ .|. +.+ .-.+|+.+|
T Consensus 55 ~~~~ivv~C~~G-~rS~~aa~~L~~----~G~-~~~-~l~GG~~~W 93 (103)
T 3iwh_A 55 KNEIYYIVCAGG-VRSAKVVEYLEA----NGI-DAV-NVEGGMHAW 93 (103)
T ss_dssp TTSEEEEECSSS-SHHHHHHHHHHT----TTC-EEE-EETTHHHHH
T ss_pred CCCeEEEECCCC-HHHHHHHHHHHH----cCC-CEE-EecChHHHH
Confidence 456899999765 589998877654 355 233 346787766
No 69
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=56.72 E-value=40 Score=28.65 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=39.7
Q ss_pred CeEEEEcC--CCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 17 KSVLFLCR--DNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 17 ~~ILFVCt--gNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
|+|||+.- |...|..+++ +++++-++ . ++-+..+|-.. .|.+..+...+.|.+.|+|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~-~l~~lr~~---~-d~vi~nge~~~--~G~g~~~~~~~~l~~~G~Da 60 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQN-HLPTIRPQ---F-DFVIVNMENSA--GGFGMHRDAARGALEAGAGC 60 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHH-HHHHHGGG---C-SEEEEECTBTT--TTSSCCHHHHHHHHHHTCSE
T ss_pred CEEEEEeccCChHHHHHHHH-HHHHHHhh---C-CEEEECCCCcc--CCcCCCHHHHHHHHhCCCCE
Confidence 58999842 4445555544 23333222 2 68899999865 37778899999999999995
No 70
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=55.48 E-value=15 Score=31.13 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=43.3
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCH-HHHHHHHHcCCCCCCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDP-RAKERCEMYGLDTEHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp-~Ai~vL~e~GIdl~hrsr~lt~~ 91 (232)
+|++++|.||..|++.+.-++.++.+. +++++. |+.. .++ .+.+..+++|++. . ..+ ++
T Consensus 3 ~M~~~~igiIG~G~~g~~~~~~~l~~~--------~~~~l~--av~d------~~~~~~~~~a~~~~~~~-~--~~~-~~ 62 (308)
T 3uuw_A 3 AMKNIKMGMIGLGSIAQKAYLPILTKS--------ERFEFV--GAFT------PNKVKREKICSDYRIMP-F--DSI-ES 62 (308)
T ss_dssp --CCCEEEEECCSHHHHHHTHHHHTSC--------SSSEEE--EEEC------SCHHHHHHHHHHHTCCB-C--SCH-HH
T ss_pred ccccCcEEEEecCHHHHHHHHHHHHhC--------CCeEEE--EEEC------CCHHHHHHHHHHcCCCC-c--CCH-HH
Confidence 467889999999998887666655321 234443 2222 234 4555667788874 1 111 23
Q ss_pred ccCCccEEEEecCC
Q psy10839 92 DFYKFDYIIATDET 105 (232)
Q Consensus 92 dl~~aDlII~Md~~ 105 (232)
.+.+.|+|+.....
T Consensus 63 ll~~~D~V~i~tp~ 76 (308)
T 3uuw_A 63 LAKKCDCIFLHSST 76 (308)
T ss_dssp HHTTCSEEEECCCG
T ss_pred HHhcCCEEEEeCCc
Confidence 34578999988764
No 71
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=54.75 E-value=5.3 Score=28.88 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|++ .|. ++.+..+|+..|
T Consensus 54 ~~~~ivvyC~~G-~rs~~aa~~L~~----~G~--~v~~l~GG~~~W 92 (108)
T 3gk5_A 54 RDKKYAVICAHG-NRSAAAVEFLSQ----LGL--NIVDVEGGIQSW 92 (108)
T ss_dssp TTSCEEEECSSS-HHHHHHHHHHHT----TTC--CEEEETTHHHHH
T ss_pred CCCeEEEEcCCC-cHHHHHHHHHHH----cCC--CEEEEcCcHHHH
Confidence 446899999655 688888777654 455 688888898776
No 72
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=52.23 E-value=31 Score=28.71 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=41.5
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
|.+++|.||..||..++ +|..+.+. |.+ ..|. +.. .++...+.+.+.|+.. .....+ .+.+
T Consensus 4 M~~~~I~iIG~G~mG~~-~a~~l~~~-----g~~--~~V~--~~d-------~~~~~~~~~~~~g~~~-~~~~~~-~~~~ 64 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGAS-LALGIKRD-----HPH--YKIV--GYN-------RSDRSRDIALERGIVD-EATADF-KVFA 64 (290)
T ss_dssp GCCCEEEEECCSHHHHH-HHHHHHHH-----CTT--SEEE--EEC-------SSHHHHHHHHHTTSCS-EEESCT-TTTG
T ss_pred cccceEEEEeeCHHHHH-HHHHHHhC-----CCC--cEEE--EEc-------CCHHHHHHHHHcCCcc-cccCCH-HHhh
Confidence 56789999999998864 55555432 222 2332 211 4466666677777631 001111 1345
Q ss_pred CCccEEEEecCC
Q psy10839 94 YKFDYIIATDET 105 (232)
Q Consensus 94 ~~aDlII~Md~~ 105 (232)
.++|+||.....
T Consensus 65 ~~aDvVilavp~ 76 (290)
T 3b1f_A 65 ALADVIILAVPI 76 (290)
T ss_dssp GGCSEEEECSCH
T ss_pred cCCCEEEEcCCH
Confidence 678998888764
No 73
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=50.97 E-value=54 Score=27.87 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=39.9
Q ss_pred CeEEEEcC--CCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 17 KSVLFLCR--DNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 17 ~~ILFVCt--gNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
|+|||+.- |...|..+++.+ +++-++ . ++-+.-||-.. .|.+..+...+.|.+.|+|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l-~~lr~~---~-d~vi~ngen~~--~G~g~~~~~~~~l~~~G~D~ 60 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHL-PDIRDR---Y-DLVIANGENAA--RGKGLDRRSYRLLREAGVDL 60 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHH-HHHGGG---C-SEEEEECTTTT--TTSSCCHHHHHHHHHHTCCE
T ss_pred CEEEEEEecCCcccHHHHHHHH-HHHHhh---C-CEEEEeCCCcc--CCCCcCHHHHHHHHhCCCCE
Confidence 68999842 444555554433 233222 2 58888888765 37788899999999999995
No 74
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=50.92 E-value=6 Score=29.66 Aligned_cols=40 Identities=13% Similarity=0.283 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+++ |. .++.+..+|+..|
T Consensus 90 ~~~~ivvyC~~G-~rs~~aa~~L~~~----G~-~~v~~l~GG~~~W 129 (139)
T 3d1p_A 90 SAKELIFYCASG-KRGGEAQKVASSH----GY-SNTSLYPGSMNDW 129 (139)
T ss_dssp TTSEEEEECSSS-HHHHHHHHHHHTT----TC-CSEEECTTHHHHH
T ss_pred CCCeEEEECCCC-chHHHHHHHHHHc----CC-CCeEEeCCcHHHH
Confidence 457899999885 5999988877753 55 3677788888765
No 75
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=50.53 E-value=7.2 Score=28.50 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=28.6
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
..|+|+|.++-.||..|..+|+.+ |. ++.+..+|+..|
T Consensus 90 ~~ivvyC~~~G~rs~~a~~~L~~~----G~--~v~~l~GG~~~W 127 (134)
T 3g5j_A 90 DNIVIYCARGGMRSGSIVNLLSSL----GV--NVYQLEGGYKAY 127 (134)
T ss_dssp SEEEEECSSSSHHHHHHHHHHHHT----TC--CCEEETTHHHHH
T ss_pred CeEEEEECCCChHHHHHHHHHHHc----CC--ceEEEeCcHHHH
Confidence 789999964447999888877654 55 578888888765
No 76
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=50.27 E-value=5.3 Score=28.72 Aligned_cols=40 Identities=8% Similarity=0.195 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. .||..|..+|+.+ |. .++.+..+|+..|
T Consensus 51 ~~~~ivvyc~~g-~rs~~a~~~L~~~----G~-~~v~~l~GG~~~W 90 (106)
T 3hix_A 51 KSRDIYVYGAGD-EQTSQAVNLLRSA----GF-EHVSELKGGLAAW 90 (106)
T ss_dssp TTSCEEEECSSH-HHHHHHHHHHHHT----TC-SCEEECTTHHHHH
T ss_pred CCCeEEEEECCC-ChHHHHHHHHHHc----CC-cCEEEecCCHHHH
Confidence 346799999864 5788888777654 54 3677778888765
No 77
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=49.80 E-value=6.9 Score=28.44 Aligned_cols=42 Identities=12% Similarity=0.191 Sum_probs=29.3
Q ss_pred eEEEEcCCCchHHHHHHHHHHHHHHhcCCC-CcEEEEEeeeccC
Q psy10839 18 SVLFLCRDNYMRSPMIKSLFKEMLAMANQT-NEWIVESAGIGWW 60 (232)
Q Consensus 18 ~ILFVCtgNicRSpmAEailr~l~~~~gl~-~~i~V~SAG~~~~ 60 (232)
.|+|+|.+. .||..|..+|+.+..-.+++ .++.+..+|+..|
T Consensus 74 ~ivv~C~~G-~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W 116 (127)
T 3i2v_A 74 PIYVICKLG-NDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAW 116 (127)
T ss_dssp EEEEECSSS-SHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHH
T ss_pred eEEEEcCCC-CcHHHHHHHHHHhhccccCCCceEEEecCCHHHH
Confidence 899999865 58999988888772111111 3577778888776
No 78
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=49.75 E-value=53 Score=29.31 Aligned_cols=88 Identities=8% Similarity=-0.024 Sum_probs=45.9
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CC-ceec-cC
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EH-VVRE-IT 89 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~h-rsr~-lt 89 (232)
|++++|.+|..|+ ++.|+...+..+.. .+++++. ||+... -...+.+..+++|++- .. .... +.
T Consensus 35 m~~~rvgiiG~G~--~~~ig~~h~~~~~~----~~~~~lv-a~v~d~-----~~~~a~~~a~~~g~~~~~~~~~~~~ll~ 102 (417)
T 3v5n_A 35 QKRIRLGMVGGGS--GAFIGAVHRIAARL----DDHYELV-AGALSS-----TPEKAEASGRELGLDPSRVYSDFKEMAI 102 (417)
T ss_dssp CCCEEEEEESCC----CHHHHHHHHHHHH----TSCEEEE-EEECCS-----SHHHHHHHHHHHTCCGGGBCSCHHHHHH
T ss_pred CCcceEEEEcCCC--chHHHHHHHHHHhh----CCCcEEE-EEEeCC-----CHHHHHHHHHHcCCCcccccCCHHHHHh
Confidence 5678999999999 23444444444332 2346654 455431 2245666778889862 11 1111 11
Q ss_pred cccc--CCccEEEEecCC--cHHHHHHh
Q psy10839 90 KDDF--YKFDYIIATDET--DLSFLRLE 113 (232)
Q Consensus 90 ~~dl--~~aDlII~Md~~--~~~~L~~~ 113 (232)
.+.. .+.|+|++.... |.+.+...
T Consensus 103 ~~~~~~~~vD~V~I~tp~~~H~~~~~~a 130 (417)
T 3v5n_A 103 REAKLKNGIEAVAIVTPNHVHYAAAKEF 130 (417)
T ss_dssp HHHHCTTCCSEEEECSCTTSHHHHHHHH
T ss_pred cccccCCCCcEEEECCCcHHHHHHHHHH
Confidence 1100 347999888754 44444443
No 79
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=48.67 E-value=6.4 Score=30.05 Aligned_cols=40 Identities=8% Similarity=0.195 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+. -||..|..+|+.+ |. .++.+..+|+..|
T Consensus 55 ~~~~ivvyC~~g-~rs~~aa~~L~~~----G~-~~v~~l~GG~~~W 94 (141)
T 3ilm_A 55 KSRDIYVYGAGD-EQTSQAVNLLRSA----GF-EHVSELKGGLAAW 94 (141)
T ss_dssp TTSEEEEECSSH-HHHHHHHHHHHHT----TC-CSEEECTTHHHHH
T ss_pred CCCeEEEEECCC-hHHHHHHHHHHHc----CC-CCEEEecCHHHHH
Confidence 446799999865 6888887777654 55 4677777887665
No 80
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=48.50 E-value=13 Score=27.81 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=27.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeee
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGI 57 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~ 57 (232)
+...|+|+|... .||.+|..+|+++ |. .++.....|+
T Consensus 73 ~~~~ivv~C~sG-~RS~~aa~~L~~~----G~-~~v~~l~GG~ 109 (134)
T 1vee_A 73 ENTTLYILDKFD-GNSELVAELVALN----GF-KSAYAIKDGA 109 (134)
T ss_dssp GGCEEEEECSSS-TTHHHHHHHHHHH----TC-SEEEECTTTT
T ss_pred CCCEEEEEeCCC-CcHHHHHHHHHHc----CC-cceEEecCCc
Confidence 456899999876 4999998888765 44 3566667887
No 81
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=47.00 E-value=9.5 Score=32.80 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+..+|++.|++. .||..|..+|++. |. .++.+..+|+..|
T Consensus 180 kdk~IVvyC~~G-~RS~~Aa~~L~~~----Gf-~nV~~L~GGi~aW 219 (265)
T 4f67_A 180 KDKKIAMFCTGG-IRCEKTTAYMKEL----GF-EHVYQLHDGILNY 219 (265)
T ss_dssp TTSCEEEECSSS-HHHHHHHHHHHHH----TC-SSEEEETTHHHHH
T ss_pred CCCeEEEEeCCC-hHHHHHHHHHHHc----CC-CCEEEecCHHHHH
Confidence 457899999976 4899888888765 55 4688888998876
No 82
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=46.74 E-value=51 Score=28.21 Aligned_cols=71 Identities=13% Similarity=0.121 Sum_probs=41.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC---C--Cceecc-C
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT---E--HVVREI-T 89 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl---~--hrsr~l-t 89 (232)
+++|.||..||.. ++||..+.+. | ..+.+.. .++...+.+.+.|..+ + ...+.. +
T Consensus 14 ~~kI~iIG~G~mG-~ala~~L~~~-----G--~~V~~~~-----------r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWG-TVFAQMLHEN-----G--EEVILWA-----------RRKEIVDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHH-HHHHHHHHHT-----T--CEEEEEC-----------SSHHHHHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHH-HHHHHHHHhC-----C--CeEEEEe-----------CCHHHHHHHHHhCCcccCCCCeeeEEEeCC
Confidence 6799999999877 4666655432 2 2333321 2355566677777432 1 011111 2
Q ss_pred ccccCCccEEEEecCC
Q psy10839 90 KDDFYKFDYIIATDET 105 (232)
Q Consensus 90 ~~dl~~aDlII~Md~~ 105 (232)
.+++..+|+||.+-..
T Consensus 75 ~~~~~~aDvVil~vk~ 90 (335)
T 1z82_A 75 LEEIKKEDILVIAIPV 90 (335)
T ss_dssp GGGCCTTEEEEECSCG
T ss_pred HHHhcCCCEEEEECCH
Confidence 2237889999998875
No 83
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=46.14 E-value=23 Score=29.51 Aligned_cols=71 Identities=13% Similarity=0.046 Sum_probs=38.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CC------ceecc
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EH------VVREI 88 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~h------rsr~l 88 (232)
+|+|+||..||... .||..+.+ .|. .+.+.. .++...+.+.+.|+.+ .. ..+..
T Consensus 3 ~m~i~iiG~G~~G~-~~a~~l~~-----~g~--~V~~~~-----------r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 63 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-RLGIMLHQ-----GGN--DVTLID-----------QWPAHIEAIRKNGLIADFNGEEVVANLPIF 63 (316)
T ss_dssp -CEEEEECCSHHHH-HHHHHHHH-----TTC--EEEEEC-----------SCHHHHHHHHHHCEEEEETTEEEEECCCEE
T ss_pred CCeEEEECcCHHHH-HHHHHHHh-----CCC--cEEEEE-----------CCHHHHHHHHhCCEEEEeCCCeeEecceee
Confidence 57999999998774 45554432 221 233221 3455566777777654 21 01111
Q ss_pred Cccc-cC---CccEEEEecCC
Q psy10839 89 TKDD-FY---KFDYIIATDET 105 (232)
Q Consensus 89 t~~d-l~---~aDlII~Md~~ 105 (232)
+..+ .. .+|+||.....
T Consensus 64 ~~~~~~~~~~~~d~vi~~v~~ 84 (316)
T 2ew2_A 64 SPEEIDHQNEQVDLIIALTKA 84 (316)
T ss_dssp CGGGCCTTSCCCSEEEECSCH
T ss_pred cchhhcccCCCCCEEEEEecc
Confidence 2222 23 79999988765
No 84
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=45.94 E-value=65 Score=27.55 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=29.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAG 56 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG 56 (232)
++.+||+|.-+|--..+-+..+|.+++++.| +++|+-.-
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g---~f~V~~~~ 41 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSG---RFDVDFVI 41 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTT---SEEEEEEE
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcC---CEEEEEEe
Confidence 5789999977666667778888999988754 36777653
No 85
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=45.20 E-value=61 Score=27.69 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=42.6
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcccc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDF 93 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl 93 (232)
|++++|.||..|++.+. ++.++.+. .++++. |+.. +-...+.+..+++|++-.. ..+ ++.+
T Consensus 3 m~~~~igiiG~G~~g~~-~~~~l~~~--------~~~~l~--av~d-----~~~~~~~~~~~~~~~~~~~--~~~-~~ll 63 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPR-FVAGLRES--------AQAEVR--GIAS-----RRLENAQKMAKELAIPVAY--GSY-EELC 63 (330)
T ss_dssp CCCEEEEECSCCTTHHH-HHHHHHHS--------SSEEEE--EEBC-----SSSHHHHHHHHHTTCCCCB--SSH-HHHH
T ss_pred CCeEEEEEECchHHHHH-HHHHHHhC--------CCcEEE--EEEe-----CCHHHHHHHHHHcCCCcee--CCH-HHHh
Confidence 56789999999999875 55554321 245543 3322 1235566677788885211 011 1222
Q ss_pred --CCccEEEEecCC
Q psy10839 94 --YKFDYIIATDET 105 (232)
Q Consensus 94 --~~aDlII~Md~~ 105 (232)
.+.|+|+.....
T Consensus 64 ~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 64 KDETIDIIYIPTYN 77 (330)
T ss_dssp HCTTCSEEEECCCG
T ss_pred cCCCCCEEEEcCCC
Confidence 368999988764
No 86
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=44.21 E-value=50 Score=30.04 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeee
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGI 57 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~ 57 (232)
++..|+|+..|+...|.++..++..+..+.|. ++-+..+.+
T Consensus 99 ~~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~--kVllvd~D~ 139 (433)
T 2xxa_A 99 PPAVVLMAGLQGAGKTTSVGKLGKFLREKHKK--KVLVVSADV 139 (433)
T ss_dssp SSEEEEEECSTTSSHHHHHHHHHHHHHHTSCC--CEEEEECCC
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCC--eEEEEecCC
Confidence 35679999999999999999999888754354 466666665
No 87
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=43.88 E-value=23 Score=29.44 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=43.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcc--
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKD-- 91 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~-- 91 (232)
++++|.++-.|+ ...+++++..... .++ ..+| +++... .++....+.++++||+. ...++.+..+
T Consensus 7 ~~~ri~vl~SG~---gsnl~all~~~~~-~~~--~~~I--~~Vis~----~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~ 74 (215)
T 3kcq_A 7 KELRVGVLISGR---GSNLEALAKAFST-EES--SVVI--SCVISN----NAEARGLLIAQSYGIPTFVVKRKPLDIEHI 74 (215)
T ss_dssp CCEEEEEEESSC---CHHHHHHHHHTCC-C-C--SEEE--EEEEES----CTTCTHHHHHHHTTCCEEECCBTTBCHHHH
T ss_pred CCCEEEEEEECC---cHHHHHHHHHHHc-CCC--CcEE--EEEEeC----CcchHHHHHHHHcCCCEEEeCcccCChHHH
Confidence 455776555554 2346777766531 112 1333 344432 24555678899999997 3333333211
Q ss_pred ----ccCCccEEEEecCC
Q psy10839 92 ----DFYKFDYIIATDET 105 (232)
Q Consensus 92 ----dl~~aDlII~Md~~ 105 (232)
.-.+.|+||+..-.
T Consensus 75 ~~~L~~~~~Dlivlagy~ 92 (215)
T 3kcq_A 75 STVLREHDVDLVCLAGFM 92 (215)
T ss_dssp HHHHHHTTCSEEEESSCC
T ss_pred HHHHHHhCCCEEEEeCCc
Confidence 12468999998753
No 88
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=43.78 E-value=64 Score=27.76 Aligned_cols=72 Identities=7% Similarity=0.013 Sum_probs=41.1
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCH-HHHHHHHHcCCCCCCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDP-RAKERCEMYGLDTEHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp-~Ai~vL~e~GIdl~hrsr~lt~~ 91 (232)
||++++|.||..|++.+ .++.++ .+ .+++++. ++.. .++ .+.+..+++|++.- ..+ ++
T Consensus 2 M~~~~~vgiiG~G~~g~-~~~~~l----~~----~~~~~lv--av~d------~~~~~~~~~~~~~g~~~~---~~~-~~ 60 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAY-VMADAY----TK----SEKLKLV--TCYS------RTEDKREKFGKRYNCAGD---ATM-EA 60 (354)
T ss_dssp CCCCEEEEEECCSHHHH-HHHHHH----TT----CSSEEEE--EEEC------SSHHHHHHHHHHHTCCCC---SSH-HH
T ss_pred CCCcceEEEEccCHHHH-HHHHHH----Hh----CCCcEEE--EEEC------CCHHHHHHHHHHcCCCCc---CCH-HH
Confidence 45678999999999775 344443 21 1245554 2322 234 44555677888751 111 12
Q ss_pred cc--CCccEEEEecCC
Q psy10839 92 DF--YKFDYIIATDET 105 (232)
Q Consensus 92 dl--~~aDlII~Md~~ 105 (232)
.+ .+.|+|+.....
T Consensus 61 ~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 61 LLAREDVEMVIITVPN 76 (354)
T ss_dssp HHHCSSCCEEEECSCT
T ss_pred HhcCCCCCEEEEeCCh
Confidence 23 468999988764
No 89
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=43.56 E-value=50 Score=27.12 Aligned_cols=87 Identities=11% Similarity=0.102 Sum_probs=49.4
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC------
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT------ 89 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt------ 89 (232)
+||.|+..||-. ..++++...... .+ ..+| .++... +.++.+.+.++++||+. ...++.+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~-~~--~~~i--~~Vis~----~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~ 68 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTN-KI--KGTV--RAVFSN----KADAFGLERARQAGIATHTLIASAFDSREAYD 68 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTT-SS--SSEE--EEEEES----CTTCHHHHHHHHTTCEEEECCGGGCSSHHHHH
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcC-CC--CceE--EEEEeC----CCchHHHHHHHHcCCcEEEeCcccccchhhcc
Confidence 467777777762 477787776421 11 1233 344332 35677888999999997 33333332
Q ss_pred cc---cc--CCccEEEEecCCc--HHHHHHhCC
Q psy10839 90 KD---DF--YKFDYIIATDETD--LSFLRLEAP 115 (232)
Q Consensus 90 ~~---dl--~~aDlII~Md~~~--~~~L~~~~P 115 (232)
++ .+ .+.|+||+..-.. -..+.+.++
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~ 101 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFMRILSPAFVSHYA 101 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeChhhhCCHHHHhhcc
Confidence 11 11 3679999987532 123445544
No 90
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=42.42 E-value=23 Score=31.52 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
....||-.|.. -.|.+++++..+ .|. .+.|.-.-+.|+..| ..+...|.+.||+....+-.--...+.
T Consensus 141 ~g~~ILTh~~S-----~tvl~~l~~A~~-~gk--~~~V~v~EtRP~~qG----rltA~eL~~~GI~vtlI~Dsa~~~~M~ 208 (338)
T 3a11_A 141 DGDVIMTHCHS-----KAAISVMKTAWE-QGK--DIKVIVTETRPKWQG----KITAKELASYGIPVIYVVDSAARHYMK 208 (338)
T ss_dssp TTCEEEECSCC-----HHHHHHHHHHHH-TTC--CCEEEEECCTTTTHH----HHHHHHHHHTTCCEEEECGGGTTTTGG
T ss_pred CCCEEEEeCCc-----HHHHHHHHHHHH-CCC--eEEEEEeCCCCchhh----HHHHHHHHhCCCCEEEEehHHHHHHHH
Confidence 44678876654 566777776543 343 588888888887544 566788899999862211111122346
Q ss_pred CccEEEEecCC
Q psy10839 95 KFDYIIATDET 105 (232)
Q Consensus 95 ~aDlII~Md~~ 105 (232)
..|.||+=.+.
T Consensus 209 ~Vd~VivGAd~ 219 (338)
T 3a11_A 209 MTDKVVMGADS 219 (338)
T ss_dssp GCSEEEECCSE
T ss_pred hCCEEEECccE
Confidence 78888876654
No 91
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=42.00 E-value=1.1e+02 Score=26.70 Aligned_cols=74 Identities=11% Similarity=0.011 Sum_probs=44.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCC--CceeccCccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTE--HVVREITKDD 92 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~--hrsr~lt~~d 92 (232)
...+|.||.-++.. .+|..++..+. .. .+++|.=+|-. |-.+++..++.+++.|..+. +.+ .+-
T Consensus 150 ~glkva~vGD~~~~--rva~Sl~~~~~-~~---~G~~v~~~~P~----~~~~~~~~~~~~~~~g~~~~~~~d~----~ea 215 (306)
T 4ekn_B 150 DGIKIAFVGDLKYG--RTVHSLVYALS-LF---ENVEMYFVSPK----ELRLPKDIIEDLKAKNIKFYEKESL----DDL 215 (306)
T ss_dssp TTCEEEEESCTTTC--HHHHHHHHHHH-TS---SSCEEEEECCG----GGCCCHHHHHHHHHTTCCEEEESCG----GGC
T ss_pred CCCEEEEEcCCCCC--cHHHHHHHHHH-hc---CCCEEEEECCc----ccccCHHHHHHHHHcCCEEEEEcCH----HHH
Confidence 35799999875322 24444444433 22 13556656543 33578888888888887651 222 244
Q ss_pred cCCccEEEEe
Q psy10839 93 FYKFDYIIAT 102 (232)
Q Consensus 93 l~~aDlII~M 102 (232)
+..+|+|++.
T Consensus 216 v~~aDvvy~~ 225 (306)
T 4ekn_B 216 DDDIDVLYVT 225 (306)
T ss_dssp CTTCSEEEEC
T ss_pred hcCCCEEEeC
Confidence 7899998874
No 92
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=41.88 E-value=71 Score=27.44 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcc-cc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKD-DF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~-dl 93 (232)
..++|.||..||+.+| ||.++.+ .|... +|. |. ..++...+.+.+.|+-.. ....+ .+ .+
T Consensus 32 ~~~kI~IIG~G~mG~s-lA~~l~~-----~G~~~--~V~--~~-------dr~~~~~~~a~~~G~~~~-~~~~~-~~~~~ 92 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGS-FAKSLRR-----SGFKG--KIY--GY-------DINPESISKAVDLGIIDE-GTTSI-AKVED 92 (314)
T ss_dssp SCSEEEEESCSHHHHH-HHHHHHH-----TTCCS--EEE--EE-------CSCHHHHHHHHHTTSCSE-EESCT-TGGGG
T ss_pred CCCEEEEEeeCHHHHH-HHHHHHh-----CCCCC--EEE--EE-------ECCHHHHHHHHHCCCcch-hcCCH-HHHhh
Confidence 3479999999998865 4444432 23311 332 22 145666777778886310 01111 23 46
Q ss_pred CCccEEEEecCC
Q psy10839 94 YKFDYIIATDET 105 (232)
Q Consensus 94 ~~aDlII~Md~~ 105 (232)
.++|+||..-..
T Consensus 93 ~~aDvVilavp~ 104 (314)
T 3ggo_A 93 FSPDFVMLSSPV 104 (314)
T ss_dssp GCCSEEEECSCG
T ss_pred ccCCEEEEeCCH
Confidence 789999988764
No 93
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=40.88 E-value=19 Score=27.54 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCce
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVV 85 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrs 85 (232)
....|||-|..+. ||.+.-+++... .|+. ...+++.+++.|+++ ..++
T Consensus 101 ~~~pVlvHC~sG~-Rs~~l~al~l~~--------------~g~~--------~~~a~~~~~~~g~~l~~~~~ 149 (156)
T 2f46_A 101 AEYPVLAYCRTGT-RCSLLWGFRRAA--------------EGMP--------VDEIIRRAQAAGVNLENFRE 149 (156)
T ss_dssp SCSSEEEECSSSH-HHHHHHHHHHHH--------------TTCC--------HHHHHHHHHHTTCCCGGGHH
T ss_pred CCCCEEEECCCCC-CHHHHHHHHHHH--------------cCCC--------HHHHHHHHHHcCCCcHHHHH
Confidence 4678999999999 998765544321 1322 256778888899998 4443
No 94
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=40.30 E-value=12 Score=32.40 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|++.|.+..+||..|..+|+.+ |. .++.+..+|+..|
T Consensus 110 ~~~~vVvyc~~g~~~a~~a~~~L~~~----G~-~~V~~L~GG~~~W 150 (318)
T 3hzu_A 110 RDDTVVIYGDKSNWWAAYALWVFTLF----GH-ADVRLLNGGRDLW 150 (318)
T ss_dssp TTCEEEEECSGGGHHHHHHHHHHHHT----TC-SCEEEETTHHHHH
T ss_pred CCCeEEEECCCCCccHHHHHHHHHHc----CC-CceEEccCCHHHH
Confidence 45789999998889999888777655 44 4688888888765
No 95
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=39.13 E-value=38 Score=29.50 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=41.7
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~ 91 (232)
+|++++|.+|..|++.+ .++.++.+ .+++++. |+.. .++...+.+++.|+.. .-...-+.
T Consensus 2 ~m~~~~vgiiG~G~~g~-~~~~~l~~--------~~~~~l~--av~d------~~~~~~~~a~~~g~~~~~~~~~ll~-- 62 (359)
T 3e18_A 2 SLKKYQLVIVGYGGMGS-YHVTLASA--------ADNLEVH--GVFD------ILAEKREAAAQKGLKIYESYEAVLA-- 62 (359)
T ss_dssp -CCCEEEEEECCSHHHH-HHHHHHHT--------STTEEEE--EEEC------SSHHHHHHHHTTTCCBCSCHHHHHH--
T ss_pred CCCcCcEEEECcCHHHH-HHHHHHHh--------CCCcEEE--EEEc------CCHHHHHHHHhcCCceeCCHHHHhc--
Confidence 36778999999999887 45554321 1245553 3322 3455556667778753 11111111
Q ss_pred ccCCccEEEEecCC
Q psy10839 92 DFYKFDYIIATDET 105 (232)
Q Consensus 92 dl~~aDlII~Md~~ 105 (232)
-.+.|+|+.....
T Consensus 63 -~~~~D~V~i~tp~ 75 (359)
T 3e18_A 63 -DEKVDAVLIATPN 75 (359)
T ss_dssp -CTTCCEEEECSCG
T ss_pred -CCCCCEEEEcCCc
Confidence 1368999988754
No 96
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=38.74 E-value=1.5e+02 Score=25.82 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=44.7
Q ss_pred CCeEEEEcCC---CchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCc
Q psy10839 16 KKSVLFLCRD---NYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITK 90 (232)
Q Consensus 16 ~~~ILFVCtg---NicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~ 90 (232)
..+|.||.-+ |.+|| ++..+. .. .+++|.=+|-..+ .+++..++.+++.|..+ .+.+ .
T Consensus 154 gl~va~vGD~~~~rva~S-----l~~~~~-~~---~g~~v~~~~P~~~----~~~~~~~~~~~~~g~~~~~~~d~----~ 216 (310)
T 3csu_A 154 NLHVAMVGDLKYGRTVHS-----LTQALA-KF---DGNRFYFIAPDAL----AMPQYILDMLDEKGIAWSLHSSI----E 216 (310)
T ss_dssp SCEEEEESCTTTCHHHHH-----HHHHHH-TS---SSCEEEEECCGGG----CCCHHHHHHHHHTTCCEEECSCG----G
T ss_pred CcEEEEECCCCCCchHHH-----HHHHHH-hC---CCCEEEEECCccc----ccCHHHHHHHHHcCCeEEEEcCH----H
Confidence 4789999885 45555 444433 21 1356776665443 47788888888888764 1222 2
Q ss_pred cccCCccEEEEec
Q psy10839 91 DDFYKFDYIIATD 103 (232)
Q Consensus 91 ~dl~~aDlII~Md 103 (232)
+-++++|+|++-.
T Consensus 217 eav~~aDvvyt~~ 229 (310)
T 3csu_A 217 EVMAEVDILYMTR 229 (310)
T ss_dssp GTTTTCSEEEECC
T ss_pred HHhcCCCEEEECC
Confidence 4578899888754
No 97
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=38.74 E-value=65 Score=27.49 Aligned_cols=67 Identities=13% Similarity=0.221 Sum_probs=41.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYK 95 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~ 95 (232)
+++|.||..|+..+ +||..+.+. | .+|. +. ..++...+.+.+.|+.... .+ .+.+.+
T Consensus 31 ~~~I~iIG~G~mG~-~~a~~l~~~-----G----~~V~--~~-------dr~~~~~~~l~~~g~~~~~---~~-~e~~~~ 87 (320)
T 4dll_A 31 ARKITFLGTGSMGL-PMARRLCEA-----G----YALQ--VW-------NRTPARAASLAALGATIHE---QA-RAAARD 87 (320)
T ss_dssp CSEEEEECCTTTHH-HHHHHHHHT-----T----CEEE--EE-------CSCHHHHHHHHTTTCEEES---SH-HHHHTT
T ss_pred CCEEEEECccHHHH-HHHHHHHhC-----C----CeEE--EE-------cCCHHHHHHHHHCCCEeeC---CH-HHHHhc
Confidence 46999999999984 577665532 2 2332 11 1456667777777753210 11 234678
Q ss_pred ccEEEEecCC
Q psy10839 96 FDYIIATDET 105 (232)
Q Consensus 96 aDlII~Md~~ 105 (232)
+|+||.+-..
T Consensus 88 aDvVi~~vp~ 97 (320)
T 4dll_A 88 ADIVVSMLEN 97 (320)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEEECCC
Confidence 9999999864
No 98
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=38.69 E-value=30 Score=28.73 Aligned_cols=56 Identities=14% Similarity=0.099 Sum_probs=38.1
Q ss_pred cCCCeEEEEcCCCchHHH----HHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCC
Q psy10839 14 EGKKSVLFLCRDNYMRSP----MIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGL 79 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSp----mAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GI 79 (232)
..+++|-++|..+.+.++ .|+.+-+.+++ .++.+.++|-.. ++...+.+.+.+.|-
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~-----~g~~lV~GGg~~-----GlM~aa~~gA~~~GG 66 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVK-----RKIDLVYGGGSV-----GLMGLISRRVYEGGL 66 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHH-----TTCEEEECCCSS-----HHHHHHHHHHHHTTC
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHH-----CCCEEEECCCcc-----cHhHHHHHHHHHcCC
Confidence 445689999999988755 67777777664 357788877421 366666666666653
No 99
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=38.66 E-value=32 Score=27.31 Aligned_cols=53 Identities=6% Similarity=-0.030 Sum_probs=39.3
Q ss_pred CeEEEEcCCCchHH----HHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCC
Q psy10839 17 KSVLFLCRDNYMRS----PMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLD 80 (232)
Q Consensus 17 ~~ILFVCtgNicRS----pmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GId 80 (232)
++|-++|..+.-.. ..|+.+-+.+++ .++.|.|+|- .+++..+.+.+.+.|-.
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~-----~g~~lV~Ggg------~GiM~aa~~gAl~~gG~ 58 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAE-----EGFGLACGGY------QGGMEALARGVKAKGGL 58 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHH-----TTEEEEECCS------STHHHHHHHHHHHTTCC
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHH-----CCCEEEeCCh------hhHHHHHHHHHHHcCCc
Confidence 47999999988653 478888887774 4689999883 24778888887776643
No 100
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=38.15 E-value=19 Score=29.90 Aligned_cols=41 Identities=10% Similarity=0.104 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.++..||..|..+|+.+ |. .++.+-.+|+..|
T Consensus 80 ~~~~vvvyc~~g~~~s~~a~~~L~~~----G~-~~v~~L~GG~~~w 120 (271)
T 1e0c_A 80 PEAVYVVYDDEGGGWAGRFIWLLDVI----GQ-QRYHYLNGGLTAW 120 (271)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHHT----TC-CCEEEETTHHHHH
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHc----CC-CCeEEecCCHHHH
Confidence 45789999988766999887777654 44 4678888888665
No 101
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=37.99 E-value=62 Score=28.15 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC--C-C--CCC-CCHHHHHHHHHcCCCC-CCceec
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW--D-V--GKG-MDPRAKERCEMYGLDT-EHVVRE 87 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~--~-~--G~~-~dp~Ai~vL~e~GIdl-~hrsr~ 87 (232)
++|||+|..+++ +|-..|+.+++. | .+| .++... . . |.. ....+.+.++++||++ .. ..
T Consensus 2 ~~mrIvf~Gt~~-----fa~~~L~~L~~~-~----~~i--~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~--~~ 67 (314)
T 1fmt_A 2 ESLRIIFAGTPD-----FAARHLDALLSS-G----HNV--VGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQP--VS 67 (314)
T ss_dssp CCCEEEEEECSH-----HHHHHHHHHHHT-T----CEE--EEEECCCCBC------CBCCHHHHHHHHTTCCEECC--SC
T ss_pred CCCEEEEEecCH-----HHHHHHHHHHHC-C----CcE--EEEEeCCCCccccccccCcCHHHHHHHHcCCcEEec--CC
Confidence 468999999865 555556666542 2 232 233221 0 1 111 1245778889999997 32 22
Q ss_pred cCc-cc-----cCCccEEEEecCC
Q psy10839 88 ITK-DD-----FYKFDYIIATDET 105 (232)
Q Consensus 88 lt~-~d-----l~~aDlII~Md~~ 105 (232)
+.. +. -.+.|+||+..-.
T Consensus 68 ~~~~~~~~~l~~~~~Dliv~~~y~ 91 (314)
T 1fmt_A 68 LRPQENQQLVAELQADVMVVVAYG 91 (314)
T ss_dssp SCSHHHHHHHHHTTCSEEEEESCC
T ss_pred CCCHHHHHHHHhcCCCEEEEeecc
Confidence 221 11 2468999998864
No 102
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=37.95 E-value=23 Score=20.99 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHcCCCCCC-----ceeccCccccCC
Q psy10839 66 MDPRAKERCEMYGLDTEH-----VVREITKDDFYK 95 (232)
Q Consensus 66 ~dp~Ai~vL~e~GIdl~h-----rsr~lt~~dl~~ 95 (232)
+.|.+.+.++++|||++. ..-.++.+|+..
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~ 36 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMR 36 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTT
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHH
Confidence 468899999999999831 223466666543
No 103
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.69 E-value=76 Score=28.90 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=47.7
Q ss_pred ccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCc
Q psy10839 11 FLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITK 90 (232)
Q Consensus 11 ~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~ 90 (232)
|+....++||+|..|.+ |..-++.+++ . +..+.|.|-. .++...+...+.++.+ ..+.+.+
T Consensus 7 ~~~l~~~~vlVvGgG~v-----a~~k~~~L~~-~--ga~V~vi~~~---------~~~~~~~l~~~~~i~~--~~~~~~~ 67 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDV-----AERKARLLLE-A--GARLTVNALT---------FIPQFTVWANEGMLTL--VEGPFDE 67 (457)
T ss_dssp EECCBTCEEEEECCSHH-----HHHHHHHHHH-T--TBEEEEEESS---------CCHHHHHHHTTTSCEE--EESSCCG
T ss_pred EEECCCCEEEEECCCHH-----HHHHHHHHHh-C--cCEEEEEcCC---------CCHHHHHHHhcCCEEE--EECCCCc
Confidence 44455789999999975 4444555554 2 3457777631 4454433333344443 3455677
Q ss_pred cccCCccEEEEecCCc
Q psy10839 91 DDFYKFDYIIATDETD 106 (232)
Q Consensus 91 ~dl~~aDlII~Md~~~ 106 (232)
+++..+|+||+..+..
T Consensus 68 ~~l~~~~lVi~at~~~ 83 (457)
T 1pjq_A 68 TLLDSCWLAIAATDDD 83 (457)
T ss_dssp GGGTTCSEEEECCSCH
T ss_pred cccCCccEEEEcCCCH
Confidence 8889999999987653
No 104
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=37.00 E-value=60 Score=27.13 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=40.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
++++|.||..||..+ +||..+.+ .| ++|. +. ..++...+.+.+.|+...... .+.+.
T Consensus 2 ~m~~I~iiG~G~mG~-~~a~~l~~-----~G----~~V~--~~-------d~~~~~~~~~~~~g~~~~~~~----~~~~~ 58 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-PMATNLLK-----AG----YLLN--VF-------DLVQSAVDGLVAAGASAARSA----RDAVQ 58 (302)
T ss_dssp -CCEEEEECCSTTHH-HHHHHHHH-----TT----CEEE--EE-------CSSHHHHHHHHHTTCEECSSH----HHHHT
T ss_pred CCCEEEEEeecHHHH-HHHHHHHh-----CC----CeEE--EE-------cCCHHHHHHHHHCCCeEcCCH----HHHHh
Confidence 467999999999885 55655543 22 2332 11 145666777777776431100 23467
Q ss_pred CccEEEEecC
Q psy10839 95 KFDYIIATDE 104 (232)
Q Consensus 95 ~aDlII~Md~ 104 (232)
++|+||.+-.
T Consensus 59 ~aDvvi~~vp 68 (302)
T 2h78_A 59 GADVVISMLP 68 (302)
T ss_dssp TCSEEEECCS
T ss_pred CCCeEEEECC
Confidence 8999999874
No 105
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=36.59 E-value=34 Score=26.82 Aligned_cols=41 Identities=24% Similarity=0.304 Sum_probs=27.2
Q ss_pred CeEEEEcCCCchHHH--HHHHHHHHHHHhcCCCCcEEEEEeeecc
Q psy10839 17 KSVLFLCRDNYMRSP--MIKSLFKEMLAMANQTNEWIVESAGIGW 59 (232)
Q Consensus 17 ~~ILFVCtgNicRSp--mAEailr~l~~~~gl~~~i~V~SAG~~~ 59 (232)
|++|++|.||.-|+= +.-.+.+.+.+ .. ++++++.-+|+.+
T Consensus 4 M~~lVlGiGN~l~gDDG~G~~v~~~L~~-~~-~~~v~vid~gt~~ 46 (159)
T 2e85_A 4 VTDVLLCVGNSMMGDDGAGPLLAEKCAA-AP-KGNWVVIDGGSAP 46 (159)
T ss_dssp CCEEEEEECCGGGGGGGHHHHHHHHHHH-SC-CTTCEEEECTTCS
T ss_pred CCEEEEEECCcccccccHHHHHHHHHhh-hC-CCCeEEEECCCCH
Confidence 689999999999872 22223333332 22 4578999889865
No 106
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=36.39 E-value=57 Score=28.31 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=40.9
Q ss_pred ccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcc
Q psy10839 13 FEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKD 91 (232)
Q Consensus 13 ~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~ 91 (232)
.|++++|.||..|++.+ .++.++.+. .+++++. |+... -...+.+..+++|++. .. ..+ ++
T Consensus 20 ~m~~~rvgiIG~G~~g~-~~~~~l~~~-------~~~~~lv--av~d~-----~~~~~~~~a~~~g~~~~~~--~~~-~~ 81 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGS-DHLRRLANT-------VSGVEVV--AVCDI-----VAGRAQAALDKYAIEAKDY--NDY-HD 81 (357)
T ss_dssp --CCEEEEEECCSHHHH-HHHHHHHHT-------CTTEEEE--EEECS-----STTHHHHHHHHHTCCCEEE--SSH-HH
T ss_pred CCCeeeEEEECCcHHHH-HHHHHHHhh-------CCCcEEE--EEEeC-----CHHHHHHHHHHhCCCCeee--CCH-HH
Confidence 45678999999999776 344444321 1345553 33221 1245566777888643 11 011 11
Q ss_pred cc--CCccEEEEecCC
Q psy10839 92 DF--YKFDYIIATDET 105 (232)
Q Consensus 92 dl--~~aDlII~Md~~ 105 (232)
.+ .+.|+|+.....
T Consensus 82 ll~~~~~D~V~i~tp~ 97 (357)
T 3ec7_A 82 LINDKDVEVVIITASN 97 (357)
T ss_dssp HHHCTTCCEEEECSCG
T ss_pred HhcCCCCCEEEEcCCc
Confidence 22 358999988754
No 107
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=35.75 E-value=37 Score=28.13 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=39.4
Q ss_pred cccCCCeEEEEcCCCchHHH----HHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCC
Q psy10839 12 LFEGKKSVLFLCRDNYMRSP----MIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGL 79 (232)
Q Consensus 12 ~~~~~~~ILFVCtgNicRSp----mAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GI 79 (232)
.+.++++|-++|-.+.+..+ .|+.+-+.+++ .++.|.|+|-.. +++..+.+.+.+.|-
T Consensus 9 ~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~-----~G~~vVsGGg~~-----GiM~aa~~gAl~~GG 70 (215)
T 2a33_A 9 QKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVS-----RNIDLVYGGGSI-----GLMGLVSQAVHDGGR 70 (215)
T ss_dssp CCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHH-----TTCEEEECCCSS-----HHHHHHHHHHHHTTC
T ss_pred ccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHH-----CCCEEEECCChh-----hHhHHHHHHHHHcCC
Confidence 34456689999998887654 57777777764 457888877321 366777777766653
No 108
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=35.68 E-value=55 Score=28.57 Aligned_cols=78 Identities=9% Similarity=0.059 Sum_probs=41.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC-C--CC-CCCHHHHHHHHHcCCCC-CCceeccCc
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD-V--GK-GMDPRAKERCEMYGLDT-EHVVREITK 90 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~-~--G~-~~dp~Ai~vL~e~GIdl-~hrsr~lt~ 90 (232)
+|||+|..|.+.. -..|+.+++. +.+|.--=+.|.. . |. ...+.+.+.+.++||++ .. ..+..
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~-----~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~--~~~~~ 69 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDS-----SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQP--FSLRD 69 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHS-----SSEEEEEECCCC----------CCHHHHHHHHTTCCEECC--SCSSS
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHC-----CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECc--ccCCC
Confidence 5799999998644 3445555531 2233211122210 1 11 12345677888999997 42 22221
Q ss_pred ----c--ccCCccEEEEecCC
Q psy10839 91 ----D--DFYKFDYIIATDET 105 (232)
Q Consensus 91 ----~--dl~~aDlII~Md~~ 105 (232)
+ .-.++|+||+..-.
T Consensus 70 ~~~~~~l~~~~~Dliv~~~~~ 90 (314)
T 3tqq_A 70 EVEQEKLIAMNADVMVVVAYG 90 (314)
T ss_dssp HHHHHHHHTTCCSEEEEESCC
T ss_pred HHHHHHHHhcCCCEEEEcCcc
Confidence 1 12468999999864
No 109
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=35.46 E-value=81 Score=22.19 Aligned_cols=78 Identities=8% Similarity=-0.096 Sum_probs=44.1
Q ss_pred CCeEEEEcCCC---chHHHHHHHHHHHHHHhcCC-CCcEEEEEeeeccCCCCCCC-----CHHHHHHHHHcCCCC-C---
Q psy10839 16 KKSVLFLCRDN---YMRSPMIKSLFKEMLAMANQ-TNEWIVESAGIGWWDVGKGM-----DPRAKERCEMYGLDT-E--- 82 (232)
Q Consensus 16 ~~~ILFVCtgN---icRSpmAEailr~l~~~~gl-~~~i~V~SAG~~~~~~G~~~-----dp~Ai~vL~e~GIdl-~--- 82 (232)
|++++||.++. .-|...|=.+...+.+.+|. .-.+-...-|+.....|..+ -....+.|.+.|+.+ .
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~~~~~~~~~~~~~~l~~l~~~gv~v~~C~~ 80 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKT 80 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBSCCCCSSSCCHHHHHHHHHHTTCCEEEEHH
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhcCCCCCcCCCHHHHHHHHHHCCCEEEEeHH
Confidence 35889988884 66666666666665544243 32444456666543222211 135566777889886 2
Q ss_pred -CceeccCcccc
Q psy10839 83 -HVVREITKDDF 93 (232)
Q Consensus 83 -hrsr~lt~~dl 93 (232)
-..+.++++++
T Consensus 81 ~l~~rGl~~~~l 92 (117)
T 1jx7_A 81 CTDGRGISTLPL 92 (117)
T ss_dssp HHHHTTCTTSCB
T ss_pred HHHHcCCChhhc
Confidence 24556665443
No 110
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=34.86 E-value=52 Score=27.20 Aligned_cols=78 Identities=10% Similarity=0.040 Sum_probs=44.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC-----
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT----- 89 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt----- 89 (232)
|+||.+...|+- --.++|+...-. -.++ .+| +++... .++..+.+.++++||+. -..++.+.
T Consensus 2 m~riavl~Sg~G---snl~ali~~~~~-~~l~--~eI--~~Visn----~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~ 69 (211)
T 3p9x_A 2 MKRVAIFASGSG---TNAEAIIQSQKA-GQLP--CEV--ALLITD----KPGAKVVERVKVHEIPVCALDPKTYPSKEAY 69 (211)
T ss_dssp -CEEEEECCTTC---HHHHHHHHHHHT-TCCS--SEE--EEEEES----CSSSHHHHHHHTTTCCEEECCGGGSSSHHHH
T ss_pred CCEEEEEEeCCc---hHHHHHHHHHHc-CCCC--cEE--EEEEEC----CCCcHHHHHHHHcCCCEEEeChhhcCchhhh
Confidence 468877777752 336677765531 1122 233 334332 35667888999999996 33333332
Q ss_pred -cc-----ccCCccEEEEecCC
Q psy10839 90 -KD-----DFYKFDYIIATDET 105 (232)
Q Consensus 90 -~~-----dl~~aDlII~Md~~ 105 (232)
++ .-.+.|+||+..-.
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~ 91 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYM 91 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHhcCCCEEEEeCch
Confidence 11 12468999998753
No 111
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=34.70 E-value=39 Score=29.87 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=38.4
Q ss_pred cccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCcc
Q psy10839 12 LFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKD 91 (232)
Q Consensus 12 ~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~ 91 (232)
+||.+++|.||..|+..+ +||..+.+ +| ..|. +. -.++..++.+.+.|+...... .+
T Consensus 18 ~Mm~~mkIgiIGlG~mG~-~~A~~L~~-----~G----~~V~--v~-------dr~~~~~~~l~~~g~~~~~s~----~e 74 (358)
T 4e21_A 18 LYFQSMQIGMIGLGRMGA-DMVRRLRK-----GG----HECV--VY-------DLNVNAVQALEREGIAGARSI----EE 74 (358)
T ss_dssp ----CCEEEEECCSHHHH-HHHHHHHH-----TT----CEEE--EE-------CSCHHHHHHHHTTTCBCCSSH----HH
T ss_pred hhhcCCEEEEECchHHHH-HHHHHHHh-----CC----CEEE--EE-------eCCHHHHHHHHHCCCEEeCCH----HH
Confidence 356778999999998774 55555443 22 2332 21 145666677777776531111 12
Q ss_pred ccCCc---cEEEEecCC
Q psy10839 92 DFYKF---DYIIATDET 105 (232)
Q Consensus 92 dl~~a---DlII~Md~~ 105 (232)
.+..+ |+||.+-..
T Consensus 75 ~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 75 FCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp HHHHSCSSCEEEECSCG
T ss_pred HHhcCCCCCEEEEeCCH
Confidence 23344 888888654
No 112
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=33.74 E-value=17 Score=30.39 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|.|.+. .||..|..+|+. ..|. .++.+..+|+..|
T Consensus 232 ~~~~ivvyC~~G-~rs~~a~~~L~~---~~G~-~~v~~l~GG~~~W 272 (285)
T 1uar_A 232 KDKDIVVYCRIA-ERSSHSWFVLKY---LLGY-PHVKNYDGSWTEW 272 (285)
T ss_dssp TTSEEEEECSSH-HHHHHHHHHHHT---TSCC-SCEEEESSHHHHH
T ss_pred CCCCEEEECCch-HHHHHHHHHHHH---HcCC-CCcceeCchHHHH
Confidence 457899999776 488888777652 2355 4689999999887
No 113
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=33.48 E-value=24 Score=27.04 Aligned_cols=45 Identities=16% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHH----HhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEML----AMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~----~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|...--||+.|...|.+.+ .+.|. .++.+..+|+..|
T Consensus 84 ~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~-~~V~~L~GG~~~W 132 (152)
T 1t3k_A 84 DKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGI-KNIMILERGFNGW 132 (152)
T ss_dssp SCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCS-SEEEEESSTTHHH
T ss_pred CCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCC-CcEEEEcCCHHHH
Confidence 456799999733358888887776533 34566 3677778887665
No 114
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=33.36 E-value=34 Score=28.49 Aligned_cols=41 Identities=7% Similarity=0.221 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD 61 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~ 61 (232)
+...|+|.|.+. .||..|..+|+.+ |. .++.+..+|+..|.
T Consensus 229 ~~~~ivv~C~~G-~rs~~a~~~L~~~----G~-~~v~~~~GG~~~W~ 269 (280)
T 1urh_A 229 YDKPIIVSCGSG-VTAAVVLLALATL----DV-PNVKLYDGAWSEWG 269 (280)
T ss_dssp SSSCEEEECCSS-STHHHHHHHHHHT----TC-SSCEEECCSCCC--
T ss_pred CCCCEEEECChH-HHHHHHHHHHHHc----CC-CCceeeCChHHHHh
Confidence 456799999765 6788887777653 55 36889999999883
No 115
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=32.70 E-value=1.1e+02 Score=27.75 Aligned_cols=67 Identities=18% Similarity=0.152 Sum_probs=42.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCcccc
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKDDF 93 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~dl 93 (232)
.|+|-||..+.+.+|.+|+.+. ++| ..|. |.-.. ..+.. +.|++.|+.+ +|.+. .+
T Consensus 12 ~~~~h~i~I~G~G~sglA~~l~-----~~G----~~V~--g~D~~-----~~~~~-~~L~~~gi~~~~g~~~~-----~~ 69 (469)
T 1j6u_A 12 HMKIHFVGIGGIGMSAVALHEF-----SNG----NDVY--GSNIE-----ETERT-AYLRKLGIPIFVPHSAD-----NW 69 (469)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH-----HTT----CEEE--EECSS-----CCHHH-HHHHHTTCCEESSCCTT-----SC
T ss_pred cccEEEEEEcccCHHHHHHHHH-----hCC----CEEE--EEcCC-----CCHHH-HHHHhCCCEEECCCCHH-----HC
Confidence 5899999999999999974332 223 3343 33221 23333 4688899987 46543 34
Q ss_pred CCccEEEEecC
Q psy10839 94 YKFDYIIATDE 104 (232)
Q Consensus 94 ~~aDlII~Md~ 104 (232)
..+|+||.--.
T Consensus 70 ~~~d~vV~spg 80 (469)
T 1j6u_A 70 YDPDLVIKTPA 80 (469)
T ss_dssp CCCSEEEECTT
T ss_pred CCCCEEEECCC
Confidence 56899887543
No 116
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=32.43 E-value=17 Score=31.94 Aligned_cols=89 Identities=7% Similarity=-0.103 Sum_probs=50.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHH------HHHHhcCCCCcEEEEEeeeccCCCCCC---CCHHHHHHHHHc--CCCC-C-C
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFK------EMLAMANQTNEWIVESAGIGWWDVGKG---MDPRAKERCEMY--GLDT-E-H 83 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr------~l~~~~gl~~~i~V~SAG~~~~~~G~~---~dp~Ai~vL~e~--GIdl-~-h 83 (232)
.+++|+...-+.-.|-+|.+.+ ..++..|+.+++-+-|+|.... .|.+ .--.|.+.+++. |+++ + .
T Consensus 165 ~~~~~~tD~~~n~~pt~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~ge~G~-~~~~~~~~i~~A~~ll~~~~~~~~v~Gpl 243 (329)
T 1td9_A 165 EEQYVFADCAINIAPDSQDLAEIAIESANTAKMFDIEPRVAMLSFSTKGS-AKSDETEKVADAVKIAKEKAPELTLDGEF 243 (329)
T ss_dssp TEEEEEECSSSCSSCCHHHHHHHHHHHHHHHHTTTCCCCEEEECSSSTTS-SCSHHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred CCEEEEEcccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCC-CCCCchHHHHHHHHHHHhhCCCCEEEeCC
Confidence 3666766444445555555543 2333347778999999987543 2222 123566677776 7766 3 2
Q ss_pred cee-ccC----------ccccCCccEEEEecCCc
Q psy10839 84 VVR-EIT----------KDDFYKFDYIIATDETD 106 (232)
Q Consensus 84 rsr-~lt----------~~dl~~aDlII~Md~~~ 106 (232)
.+. .+. .....++|+||+|+-.+
T Consensus 244 ~~D~a~~~~~~~~k~~~s~~~G~aDvlV~pd~d~ 277 (329)
T 1td9_A 244 QFDAAFVPSVAEKKAPDSEIKGDANVFVFPSLEA 277 (329)
T ss_dssp CHHHHHCHHHHHHHCTTSSCSSCCSEEECSSHHH
T ss_pred cHHHHcCHHHHHhhCCCCccCCCCCEEEECChhH
Confidence 211 111 12237899999998653
No 117
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=31.88 E-value=57 Score=27.99 Aligned_cols=74 Identities=9% Similarity=0.051 Sum_probs=38.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCcee-ccCccccC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVR-EITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr-~lt~~dl~ 94 (232)
+++|.||..|+.. ++||..+.+ .|. ..+.+.. ..+.. - .-.+...+.+.+.|+ .. .+ .+.+.
T Consensus 24 ~m~IgvIG~G~mG-~~lA~~L~~-----~G~-~~V~~~d--r~~~~-~-~~~~~~~~~~~~~g~-----~~~s~-~e~~~ 86 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-QSIAGGLGG-----RNA-ARLAAYD--LRFND-P-AASGALRARAAELGV-----EPLDD-VAGIA 86 (317)
T ss_dssp CCEEEEECCSHHH-HHHHHHHHT-----TTC-SEEEEEC--GGGGC-T-TTHHHHHHHHHHTTC-----EEESS-GGGGG
T ss_pred CCeEEEECccHHH-HHHHHHHHH-----cCC-CeEEEEe--CCCcc-c-cchHHHHHHHHHCCC-----CCCCH-HHHHh
Confidence 4789999999877 345554432 221 1233322 11100 0 011134455566676 11 11 24467
Q ss_pred CccEEEEecCCc
Q psy10839 95 KFDYIIATDETD 106 (232)
Q Consensus 95 ~aDlII~Md~~~ 106 (232)
++|+||.+-...
T Consensus 87 ~aDvVi~avp~~ 98 (317)
T 4ezb_A 87 CADVVLSLVVGA 98 (317)
T ss_dssp GCSEEEECCCGG
T ss_pred cCCEEEEecCCH
Confidence 899999986543
No 118
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=31.79 E-value=24 Score=31.50 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=55.0
Q ss_pred CCeEEEEcCCCchHHHHH----HHH------HHHHHHhcCCCCcEEEEEeeeccCCCCC---------CCCHHHHHHHHH
Q psy10839 16 KKSVLFLCRDNYMRSPMI----KSL------FKEMLAMANQTNEWIVESAGIGWWDVGK---------GMDPRAKERCEM 76 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmA----Eai------lr~l~~~~gl~~~i~V~SAG~~~~~~G~---------~~dp~Ai~vL~e 76 (232)
.++|.+|-++=.-|-... |.+ +.++.++.|+. .=+|-=||+-|. .|+ .+=..|++.+++
T Consensus 163 ~LrV~lvT~HipL~~V~~~it~e~i~~~i~~~~~L~~~fgi~-~PrIaV~GLNPH-AGE~G~~G~EE~~iI~PAi~~~r~ 240 (330)
T 2hi1_A 163 KLKVIHVSTHIALRKFLDTLSTARVETVIGIADTFLKRVGYV-KPRIAVAGVNPH-AGENGLFGDEETRILTPAITDARA 240 (330)
T ss_dssp SCEEEESCCSSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTCS-SCEEEEECSSGG-GSSTTSCCHHHHHTHHHHHHHHHT
T ss_pred CcEEEEeecCccHHHHHHhcCHHHHHHHHHHHHHHHHHcCCC-CCCEEEEecCCC-CCCCCCCCHhHHHHHHHHHHHHHH
Confidence 578888866544333221 122 22332235764 446788999874 333 234557888899
Q ss_pred cCCCC-C-Cceecc-CccccCCccEEEEecCCc
Q psy10839 77 YGLDT-E-HVVREI-TKDDFYKFDYIIATDETD 106 (232)
Q Consensus 77 ~GIdl-~-hrsr~l-t~~dl~~aDlII~Md~~~ 106 (232)
.||++ + ..+-.+ ......+||.||+|-..|
T Consensus 241 ~Gi~~~GP~paDT~F~~~~~~~~D~vlaMYHDQ 273 (330)
T 2hi1_A 241 KGMDVYGPCPPDTVFLQAYEGQYDMVVAMYHDQ 273 (330)
T ss_dssp TTCEEEEEECHHHHHHHHHTTSCSEEEESSHHH
T ss_pred CCCceeCCCCchhhccccccccCCEEEEccccc
Confidence 99998 4 544443 455678999999998654
No 119
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.68 E-value=1.1e+02 Score=25.27 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC----
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT---- 89 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt---- 89 (232)
.+++|.+...|+ ..-.++++..... |+ ..+| +++... +++..+.+.++++||+. ...++.+.
T Consensus 4 ~~~riavl~SG~---Gsnl~all~~~~~--~~--~~eI--~~Vis~----~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~ 70 (215)
T 3tqr_A 4 EPLPIVVLISGN---GTNLQAIIGAIQK--GL--AIEI--RAVISN----RADAYGLKRAQQADIPTHIIPHEEFPSRTD 70 (215)
T ss_dssp CCEEEEEEESSC---CHHHHHHHHHHHT--TC--SEEE--EEEEES----CTTCHHHHHHHHTTCCEEECCGGGSSSHHH
T ss_pred CCcEEEEEEeCC---cHHHHHHHHHHHc--CC--CCEE--EEEEeC----CcchHHHHHHHHcCCCEEEeCccccCchhH
Confidence 356787776665 3556777776542 22 2343 444432 36677888999999997 32222221
Q ss_pred --cc-----ccCCccEEEEecCCc-H-HHHHHhCC
Q psy10839 90 --KD-----DFYKFDYIIATDETD-L-SFLRLEAP 115 (232)
Q Consensus 90 --~~-----dl~~aDlII~Md~~~-~-~~L~~~~P 115 (232)
++ .-.+.|+||+..-.. . ..+.+.++
T Consensus 71 ~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~ 105 (215)
T 3tqr_A 71 FESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYS 105 (215)
T ss_dssp HHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTT
T ss_pred hHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhcc
Confidence 11 124689999987532 1 23445544
No 120
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.60 E-value=1.9e+02 Score=23.86 Aligned_cols=66 Identities=12% Similarity=0.202 Sum_probs=39.7
Q ss_pred CCeEEEEcC-CCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 16 KKSVLFLCR-DNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 16 ~~~ILFVCt-gNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
+++|.||.. ||..++ ||..+.+ .| .+|. +.. .++...+.+.+.|++.. . ..+.+.
T Consensus 11 mm~I~iIG~tG~mG~~-la~~l~~-----~g----~~V~--~~~-------r~~~~~~~~~~~g~~~~----~-~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGAR-ITRKIHD-----SA----HHLA--AIE-------IAPEGRDRLQGMGIPLT----D-GDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHH-HHHHHHH-----SS----SEEE--EEC-------CSHHHHHHHHHTTCCCC----C-SSGGGG
T ss_pred CCEEEEECCCCHHHHH-HHHHHHh-----CC----CEEE--EEE-------CCHHHHHHHHhcCCCcC----C-HHHHhc
Confidence 369999999 987754 4554432 22 2343 221 34555666667786542 1 124467
Q ss_pred CccEEEEecCC
Q psy10839 95 KFDYIIATDET 105 (232)
Q Consensus 95 ~aDlII~Md~~ 105 (232)
++|+||..-..
T Consensus 67 ~aDvVi~av~~ 77 (286)
T 3c24_A 67 EADVVVLALPD 77 (286)
T ss_dssp TCSEEEECSCH
T ss_pred CCCEEEEcCCc
Confidence 89999988764
No 121
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=31.56 E-value=1.3e+02 Score=25.26 Aligned_cols=69 Identities=12% Similarity=-0.010 Sum_probs=41.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY 94 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~ 94 (232)
.+++|.||..|+..+ +||..+.+ .| ..|. +. ..++...+.+.+.|+.. ....+ .+.+.
T Consensus 6 ~~~~I~iIG~G~mG~-~~a~~l~~-----~G----~~V~--~~-------dr~~~~~~~~~~~g~~~--~~~~~-~e~~~ 63 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-GAARSCLR-----AG----LSTW--GA-------DLNPQACANLLAEGACG--AAASA-REFAG 63 (303)
T ss_dssp -CCEEEEECCSHHHH-HHHHHHHH-----TT----CEEE--EE-------CSCHHHHHHHHHTTCSE--EESSS-TTTTT
T ss_pred CCCeEEEECCCHHHH-HHHHHHHH-----CC----CeEE--EE-------ECCHHHHHHHHHcCCcc--ccCCH-HHHHh
Confidence 457999999999775 45655443 22 2332 11 14667777787777642 01111 23467
Q ss_pred CccEEEEecCC
Q psy10839 95 KFDYIIATDET 105 (232)
Q Consensus 95 ~aDlII~Md~~ 105 (232)
++|+||.+-..
T Consensus 64 ~aDvvi~~vp~ 74 (303)
T 3g0o_A 64 VVDALVILVVN 74 (303)
T ss_dssp TCSEEEECCSS
T ss_pred cCCEEEEECCC
Confidence 89999999875
No 122
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=30.78 E-value=26 Score=30.50 Aligned_cols=74 Identities=7% Similarity=-0.049 Sum_probs=43.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
...+|+||.+|.+.|+.. +++.. .++. ..+.|.+.- .....+.+.-++.|++. .. .+ ++.+
T Consensus 120 ~~~~v~iIGaG~~a~~~~-~al~~----~~~~-~~V~v~~r~--------~a~~la~~l~~~~g~~~~~~---~~-~eav 181 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHA-AQLSA----RFAL-EAILVHDPY--------ASPEILERIGRRCGVPARMA---AP-ADIA 181 (313)
T ss_dssp TCCEEEEECCSHHHHHHH-HHHHH----HSCC-CEEEEECTT--------CCHHHHHHHHHHHTSCEEEC---CH-HHHH
T ss_pred CCcEEEEECccHHHHHHH-HHHHH----hCCC-cEEEEECCc--------HHHHHHHHHHHhcCCeEEEe---CH-HHHH
Confidence 357899999998888643 34443 2222 456655433 13344444334468764 22 12 2446
Q ss_pred CCccEEEEecCCc
Q psy10839 94 YKFDYIIATDETD 106 (232)
Q Consensus 94 ~~aDlII~Md~~~ 106 (232)
.++|+|++.+...
T Consensus 182 ~~aDIVi~aT~s~ 194 (313)
T 3hdj_A 182 AQADIVVTATRST 194 (313)
T ss_dssp HHCSEEEECCCCS
T ss_pred hhCCEEEEccCCC
Confidence 7899999998763
No 123
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=30.75 E-value=28 Score=26.93 Aligned_cols=45 Identities=16% Similarity=0.163 Sum_probs=29.7
Q ss_pred CCCeEEEE--cCCCchHHHHHHHHHHHH------HHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFL--CRDNYMRSPMIKSLFKEM------LAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFV--CtgNicRSpmAEailr~l------~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|++| |...-.||+.|..+|++. +...|. .++.+..+|+..|
T Consensus 88 ~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~-~~V~~L~GG~~~W 140 (175)
T 2a2k_A 88 LDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYY-PEMYILKGGYKEF 140 (175)
T ss_dssp --CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSC-CCEEEETTHHHHH
T ss_pred CCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCC-ceEEEEcCCHHHH
Confidence 34567777 542345999999888764 223355 3688888998876
No 124
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=29.48 E-value=41 Score=28.78 Aligned_cols=78 Identities=8% Similarity=-0.017 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYK 95 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~ 95 (232)
...||-.|.+ ..+++++++..+ .| ..+.|.-.-+.|+..| ......|.+.||+....+...-...+..
T Consensus 110 g~~IlT~~~s-----~Tv~~~l~~a~~-~~--~~~~V~v~etrP~~qG----~~~a~~L~~~gI~vtli~dsa~~~~m~~ 177 (276)
T 1vb5_A 110 GDVIITHSFS-----STVLEIIRTAKE-RK--KRFKVILTESSPDYEG----LHLARELEFSGIEFEVITDAQMGLFCRE 177 (276)
T ss_dssp TEEEECCSCC-----HHHHHHHHHHHH-TT--CCEEEEEECCTTTTHH----HHHHHHHHHTTCCEEEECGGGHHHHHTT
T ss_pred CCEEEEeCCC-----hHHHHHHHHHHH-cC--CeEEEEEeCCCcchhh----HHHHHHHHHCCCCEEEEcHHHHHHHHcc
Confidence 3456656655 467778877653 23 3588888888886444 4566777779998621111111123457
Q ss_pred ccEEEEecCC
Q psy10839 96 FDYIIATDET 105 (232)
Q Consensus 96 aDlII~Md~~ 105 (232)
.|.||+=.+.
T Consensus 178 vd~vivGAd~ 187 (276)
T 1vb5_A 178 ASIAIVGADM 187 (276)
T ss_dssp CSEEEECCSE
T ss_pred CCEEEEcccE
Confidence 8888776654
No 125
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.35 E-value=66 Score=26.17 Aligned_cols=67 Identities=19% Similarity=0.175 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCC--CceeccCccccCCccEEEEecCC
Q psy10839 31 PMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTE--HVVREITKDDFYKFDYIIATDET 105 (232)
Q Consensus 31 pmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~--hrsr~lt~~dl~~aDlII~Md~~ 105 (232)
|-+=+=+-+++.++|. +|. -|++|. .| .+.-+.--.|+|.+++.+ +---.++ ++|.++|++++....
T Consensus 39 Q~~v~el~~~L~~~G~----~V~-faIHPV-AG-RMPGhMNVLLAEA~VPYd~v~EMdeIN-~df~~tDv~lVIGAN 107 (184)
T 1d4o_A 39 QYPIADLVKMLSEQGK----KVR-FGIHPV-AG-RMPGQLNVLLAEAGVPYDIVLEMDEIN-HDFPDTDLVLVIGAN 107 (184)
T ss_dssp HHHHHHHHHHHHHTTC----EEE-EEECTT-CS-SSTTHHHHHHHHHTCCGGGEEEHHHHG-GGGGGCSEEEEESCS
T ss_pred HHHHHHHHHHHHHCCC----eEE-EEeccc-cc-cCCCcceEEEEEecCCHHHHHhHHHHh-hhhhhcCEEEEecCC
Confidence 3333334556666554 443 378885 34 488888888999999863 3333444 578999999999865
No 126
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=29.33 E-value=73 Score=26.45 Aligned_cols=96 Identities=10% Similarity=-0.060 Sum_probs=50.0
Q ss_pred cCCCeEEEEcCC---------------C-chHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC-CCC-----CCCHHHH
Q psy10839 14 EGKKSVLFLCRD---------------N-YMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD-VGK-----GMDPRAK 71 (232)
Q Consensus 14 ~~~~~ILFVCtg---------------N-icRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~-~G~-----~~dp~Ai 71 (232)
|++||||||+.. + -.=...+..+++.+.+ .|. .+.|.+....... .+- +.-....
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~-~G~--~v~v~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLE-LGH--EVFLLGAPGSPAGRPGLTVVPAGEPEEIE 77 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHH-TTC--EEEEESCTTSCCCSTTEEECSCCSHHHHH
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHH-cCC--eEEEEecCCCCCCCCcceeccCCcHHHHH
Confidence 677999999987 2 2234455666666653 333 4555554322110 000 0011567
Q ss_pred HHHHHcCCCC--CCceec------------cCccc----cCCccEEEEecCCcHHHHHH
Q psy10839 72 ERCEMYGLDT--EHVVRE------------ITKDD----FYKFDYIIATDETDLSFLRL 112 (232)
Q Consensus 72 ~vL~e~GIdl--~hrsr~------------lt~~d----l~~aDlII~Md~~~~~~L~~ 112 (232)
+.+++..+|+ .|.... ++..+ ...+|.|++.++...+.+.+
T Consensus 78 ~~l~~~~~Dvi~~~~~~~~~~~~~~~~~pv~~~h~~~~~~~~~d~ii~~S~~~~~~~~~ 136 (342)
T 2iuy_A 78 RWLRTADVDVVHDHSGGVIGPAGLPPGTAFISSHHFTTRPVNPVGCTYSSRAQRAHCGG 136 (342)
T ss_dssp HHHHHCCCSEEEECSSSSSCSTTCCTTCEEEEEECSSSBCSCCTTEEESCHHHHHHTTC
T ss_pred HHHHhcCCCEEEECCchhhHHHHhhcCCCEEEecCCCCCcccceEEEEcCHHHHHHHhc
Confidence 7788888886 343211 11111 12288999998776655543
No 127
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=29.15 E-value=27 Score=28.87 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD 61 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~ 61 (232)
+...|+|.|.+. .||..|-.+|+.+ |. .++.+..+|+..|.
T Consensus 222 ~~~~ivvyC~~G-~rs~~a~~~L~~~----G~-~~v~~l~GG~~~W~ 262 (271)
T 1e0c_A 222 PDKEIVTHCQTH-HRSGLTYLIAKAL----GY-PRVKGYAGSWGEWG 262 (271)
T ss_dssp TTSEEEEECSSS-SHHHHHHHHHHHT----TC-SCEEECSSHHHHHT
T ss_pred CCCCEEEECCch-HHHHHHHHHHHHc----CC-CCceeeCCcHHHHh
Confidence 457899999987 4898888777643 55 46888899998773
No 128
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=29.07 E-value=28 Score=26.53 Aligned_cols=45 Identities=22% Similarity=0.273 Sum_probs=29.5
Q ss_pred CCCeEE--EEcCCCchHHHHHHHHHHHH------HHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVL--FLCRDNYMRSPMIKSLFKEM------LAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~IL--FVCtgNicRSpmAEailr~l------~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+ |.|...-.||+.|..+|++. +.+.|. .++.+..+|+..|
T Consensus 86 ~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~-~~v~~l~GG~~~W 138 (161)
T 1c25_A 86 DGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHY-PELYVLKGGYKEF 138 (161)
T ss_dssp TTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSS-CCEEEETTHHHHH
T ss_pred CCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCC-ceEEEEcCCHHHH
Confidence 345664 55863456999998888765 223355 3678888888765
No 129
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=28.45 E-value=42 Score=26.26 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=26.2
Q ss_pred CeEEEEcCCCchHH------HHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 17 KSVLFLCRDNYMRS------PMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 17 ~~ILFVCtgNicRS------pmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
|+||++|.||+-|+ -.||.+- ..++ ++++.-+|+.+.
T Consensus 3 m~ilVlGiGN~L~gDDG~G~~v~~~L~------~~~p-~v~vid~Gt~~~ 45 (157)
T 3pu6_A 3 LKKVLLCVGNELRGDDGVAIALGRLVE------EQMP-EWSVFFGYDTPE 45 (157)
T ss_dssp CCEEEEEECCTTBGGGGHHHHHHHHHH------HHCT-TEEEEEEETCGG
T ss_pred CCEEEEEECCcccccccHHHHHHHHHH------hhCC-CeEEEECCCCHH
Confidence 58999999999986 3333332 1234 799999998653
No 130
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=28.45 E-value=21 Score=33.00 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
...||.|.++..-++...+.+++++- +.+.|.|+|-... -| .|++.+++.|++.|+.+
T Consensus 220 ~~DvLkv~HHG~S~~s~s~~fl~~v~------P~~aiiS~g~~n~-~~-hP~~evl~~l~~~g~~v 277 (547)
T 2bib_A 220 KVDLMKFNHHHDTNKSNTKDFIKNLS------PSLIVQTSDSLPW-KN-GVDSEYVNWLKERGIER 277 (547)
T ss_dssp CCSEEECTTTTBCSSSSCHHHHHHHC------CSEEEESBSSCSB-SS-SBCHHHHHHHHTTTCEE
T ss_pred ceeEEEeccccCcccCChHHHHHhcC------CcEEEEcCCcccc-cC-CCCHHHHHHHHhCCceE
Confidence 34677777664223334566776653 5789999997543 23 48999999999999876
No 131
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=28.21 E-value=29 Score=29.05 Aligned_cols=78 Identities=13% Similarity=-0.044 Sum_probs=42.5
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHH-cCCCC-C-Cc------
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEM-YGLDT-E-HV------ 84 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e-~GIdl-~-hr------ 84 (232)
..+|+|.||..||.. ++||..+.+......| ..+|. .+ . . +...+.+.+ .|+.+ + +.
T Consensus 6 ~~~m~I~iiG~G~mG-~~~a~~L~~~~~~~~g---~~~V~--~~-~-----r--~~~~~~l~~~~g~~~~~~~~~~~~~~ 71 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVG-GYYGAMLALRAAATDG---LLEVS--WI-A-----R--GAHLEAIRAAGGLRVVTPSRDFLARP 71 (317)
T ss_dssp -CCEEEEEECCSHHH-HHHHHHHHHHHHHTTS---SEEEE--EE-C-----C--HHHHHHHHHHTSEEEECSSCEEEECC
T ss_pred CCCCEEEEECcCHHH-HHHHHHHHhCccccCC---CCCEE--EE-E-----c--HHHHHHHHhcCCeEEEeCCCCeEEec
Confidence 345799999999999 6888877754211002 02332 11 0 1 334455666 77654 2 10
Q ss_pred eeccC-ccccCCccEEEEecCC
Q psy10839 85 VREIT-KDDFYKFDYIIATDET 105 (232)
Q Consensus 85 sr~lt-~~dl~~aDlII~Md~~ 105 (232)
.+..+ .+.+..+|+||++...
T Consensus 72 ~~~~~~~~~~~~~D~vil~vk~ 93 (317)
T 2qyt_A 72 TCVTDNPAEVGTVDYILFCTKD 93 (317)
T ss_dssp SEEESCHHHHCCEEEEEECCSS
T ss_pred ceEecCccccCCCCEEEEecCc
Confidence 11111 2345678988888765
No 132
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=27.68 E-value=95 Score=25.40 Aligned_cols=65 Identities=12% Similarity=-0.067 Sum_probs=38.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCCc
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYKF 96 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~a 96 (232)
++|.||..|+..+. +|..+.+ |. .+.+.. .++...+.+.+.|+... . ..+.+.++
T Consensus 2 ~~i~iiG~G~~G~~-~a~~l~~------g~--~V~~~~-----------~~~~~~~~~~~~g~~~~----~-~~~~~~~~ 56 (289)
T 2cvz_A 2 EKVAFIGLGAMGYP-MAGHLAR------RF--PTLVWN-----------RTFEKALRHQEEFGSEA----V-PLERVAEA 56 (289)
T ss_dssp CCEEEECCSTTHHH-HHHHHHT------TS--CEEEEC-----------SSTHHHHHHHHHHCCEE----C-CGGGGGGC
T ss_pred CeEEEEcccHHHHH-HHHHHhC------CC--eEEEEe-----------CCHHHHHHHHHCCCccc----C-HHHHHhCC
Confidence 58999999998864 4544432 32 243321 23344445555566431 1 23446789
Q ss_pred cEEEEecCCc
Q psy10839 97 DYIIATDETD 106 (232)
Q Consensus 97 DlII~Md~~~ 106 (232)
|+||......
T Consensus 57 D~vi~~v~~~ 66 (289)
T 2cvz_A 57 RVIFTCLPTT 66 (289)
T ss_dssp SEEEECCSSH
T ss_pred CEEEEeCCCh
Confidence 9999988753
No 133
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=27.30 E-value=29 Score=28.10 Aligned_cols=39 Identities=13% Similarity=0.154 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|.|.+.. ||..|..+|+++ | .++.+..+|+..|
T Consensus 183 ~~~~iv~~C~~G~-rs~~a~~~L~~~----G--~~v~~~~Gg~~~W 221 (230)
T 2eg4_A 183 PGQEVGVYCHSGA-RSAVAFFVLRSL----G--VRARNYLGSMHEW 221 (230)
T ss_dssp TTCEEEEECSSSH-HHHHHHHHHHHT----T--CEEEECSSHHHHH
T ss_pred CCCCEEEEcCChH-HHHHHHHHHHHc----C--CCcEEecCcHHHH
Confidence 4578999997654 999888877764 4 4688888888765
No 134
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=27.06 E-value=1.1e+02 Score=22.01 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--C--CceeccCc
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--E--HVVREITK 90 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~--hrsr~lt~ 90 (232)
.+++|+++..|.+.+ .+.+.+.+ +|. .+.+ +. .++...+.+.+.|+.. . ..+..+..
T Consensus 5 ~~~~v~I~G~G~iG~-----~la~~L~~-~g~--~V~~----id-------~~~~~~~~~~~~~~~~~~gd~~~~~~l~~ 65 (141)
T 3llv_A 5 GRYEYIVIGSEAAGV-----GLVRELTA-AGK--KVLA----VD-------KSKEKIELLEDEGFDAVIADPTDESFYRS 65 (141)
T ss_dssp -CCSEEEECCSHHHH-----HHHHHHHH-TTC--CEEE----EE-------SCHHHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCHHHH-----HHHHHHHH-CCC--eEEE----EE-------CCHHHHHHHHHCCCcEEECCCCCHHHHHh
Confidence 356898888776544 34444442 232 2332 21 3567777777888753 2 12333444
Q ss_pred cccCCccEEEEecCC
Q psy10839 91 DDFYKFDYIIATDET 105 (232)
Q Consensus 91 ~dl~~aDlII~Md~~ 105 (232)
..+.++|+||.....
T Consensus 66 ~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 66 LDLEGVSAVLITGSD 80 (141)
T ss_dssp SCCTTCSEEEECCSC
T ss_pred CCcccCCEEEEecCC
Confidence 456789999988764
No 135
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=26.78 E-value=70 Score=26.74 Aligned_cols=35 Identities=6% Similarity=-0.105 Sum_probs=19.1
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEE
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVES 54 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~S 54 (232)
|+|||++.|.-.--..+..+.+.+.+ +|. .+.+.+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~-~G~--~V~v~~ 41 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMA-QGW--QVRWLG 41 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHT-TTC--EEEEEE
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHH-cCC--EEEEEe
Confidence 89999986543333333455555543 332 355544
No 136
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=26.77 E-value=1.3e+02 Score=26.13 Aligned_cols=73 Identities=16% Similarity=0.108 Sum_probs=44.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC--CCceeccCcccc
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT--EHVVREITKDDF 93 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl--~hrsr~lt~~dl 93 (232)
..+|.||.-++..| +|..++..+.. + +++|.=+|-..+ .+++...+.+++.|..+ .+.+ .+.+
T Consensus 155 gl~va~vGD~~~~r--va~Sl~~~~~~---~--G~~v~~~~P~~~----~~~~~~~~~~~~~g~~~~~~~d~----~eav 219 (308)
T 1ml4_A 155 GLKIGLLGDLKYGR--TVHSLAEALTF---Y--DVELYLISPELL----RMPRHIVEELREKGMKVVETTTL----EDVI 219 (308)
T ss_dssp SEEEEEESCTTTCH--HHHHHHHHGGG---S--CEEEEEECCGGG----CCCHHHHHHHHHTTCCEEEESCT----HHHH
T ss_pred CeEEEEeCCCCcCc--hHHHHHHHHHH---C--CCEEEEECCccc----cCCHHHHHHHHHcCCeEEEEcCH----HHHh
Confidence 46899999863222 34444444332 1 367777775444 47787888888888654 1111 2347
Q ss_pred CCccEEEEec
Q psy10839 94 YKFDYIIATD 103 (232)
Q Consensus 94 ~~aDlII~Md 103 (232)
+++|+|++-.
T Consensus 220 ~~aDvvyt~~ 229 (308)
T 1ml4_A 220 GKLDVLYVTR 229 (308)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEECC
Confidence 8899888854
No 137
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=26.66 E-value=29 Score=30.63 Aligned_cols=78 Identities=14% Similarity=0.059 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCC
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYK 95 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~ 95 (232)
...||-.|. |..+++++++.. +.| ..+.|.-.-+.|...|. .....|.+.||+....+-.--...+..
T Consensus 122 g~~ILTh~~-----S~tv~~~l~~A~-~~g--k~~~V~v~EsrP~~qG~----~la~~L~~~gI~vtli~Dsa~~~~m~~ 189 (315)
T 3ecs_A 122 GATILTHAY-----SRVVLRVLEAAV-AAK--KRFSVYVTESQPDLSGK----KMAKALCHLNVPVTVVLDAAVGYIMEK 189 (315)
T ss_dssp TEEEEECSC-----CHHHHHHHHHHH-TTT--CCEEEEEECCTTTTHHH----HHHHHHHTTTCCEEEECGGGHHHHGGG
T ss_pred CCEEEEcCC-----cHHHHHHHHHHH-HcC--CeEEEEEecCCCcchHH----HHHHHHHHcCCCEEEEehhHHHHHHHh
Confidence 346777653 468888887654 334 35889988888865453 446788889998521111111123346
Q ss_pred ccEEEEecCC
Q psy10839 96 FDYIIATDET 105 (232)
Q Consensus 96 aDlII~Md~~ 105 (232)
.|.||+=.+.
T Consensus 190 vd~VivGAd~ 199 (315)
T 3ecs_A 190 ADLVIVGAEG 199 (315)
T ss_dssp CSEEEEECSE
T ss_pred CCEEEECceE
Confidence 7888776654
No 138
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.18 E-value=89 Score=25.92 Aligned_cols=61 Identities=21% Similarity=0.232 Sum_probs=41.7
Q ss_pred HHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCC--CceeccCccccCCccEEEEecCC
Q psy10839 37 FKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTE--HVVREITKDDFYKFDYIIATDET 105 (232)
Q Consensus 37 lr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~--hrsr~lt~~dl~~aDlII~Md~~ 105 (232)
|-+++.++|. +|. -|++|. .| ++.-+.--.|.|.+++.+ +---.++ ++|.++|++|+....
T Consensus 68 l~~~L~~~G~----~V~-faIHPV-AG-RMPGhMNVLLAEA~VPYd~v~EMdeIN-~df~~tDv~lVIGAN 130 (207)
T 1djl_A 68 LVKMLTEQGK----KVR-FGIHPV-AG-RMPGQLNVLLAEAGVPYDIVLEMDEIN-HDFPDTDLVLVIGAN 130 (207)
T ss_dssp HHHHHHHTTC----EEE-EEECTT-CS-SSTTHHHHHHHHTTCCGGGEEEHHHHG-GGGGGCSEEEEESCC
T ss_pred HHHHHHHCCC----eEE-EEeCcc-CC-CCCCCCcEEEEEeCCCHHHHhhHHHHh-hhhhhcCEEEEeccc
Confidence 4455665554 443 378885 34 488888888999999863 3333344 578999999999865
No 139
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=25.79 E-value=66 Score=28.08 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=43.6
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCC-CCC--C-CCHHHHHHHHHcCCCC-CCceecc
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWD-VGK--G-MDPRAKERCEMYGLDT-EHVVREI 88 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~-~G~--~-~dp~Ai~vL~e~GIdl-~hrsr~l 88 (232)
++||+|+|..|.... -..|+.+++. +++|.--=+.|.. .|. . ..+.+.+.+.++||++ .. ..+
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~-----~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~--~~~ 69 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIED-----GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQP--LRI 69 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHT-----TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECC--SCT
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHC-----CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEcc--ccC
Confidence 567999999998644 3445555532 2233211112210 111 1 2345777889999997 32 222
Q ss_pred Cc-c---cc--CCccEEEEecCC
Q psy10839 89 TK-D---DF--YKFDYIIATDET 105 (232)
Q Consensus 89 t~-~---dl--~~aDlII~Md~~ 105 (232)
.. + .+ .++|+||+..-.
T Consensus 70 ~~~~~~~~l~~~~~Dliv~~~y~ 92 (317)
T 3rfo_A 70 REKDEYEKVLALEPDLIVTAAFG 92 (317)
T ss_dssp TSHHHHHHHHHHCCSEEEESSCC
T ss_pred CCHHHHHHHHhcCCCEEEEcCch
Confidence 21 1 11 368999998753
No 140
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=25.55 E-value=50 Score=23.75 Aligned_cols=26 Identities=8% Similarity=0.102 Sum_probs=22.1
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHH
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKE 39 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~ 39 (232)
|++.+|+++..+|+..|.+...++..
T Consensus 1 m~~~~i~v~G~~~~GKssl~~~l~~~ 26 (166)
T 2ce2_X 1 MTEYKLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CceeEEEEECCCCCCHHHHHHHHHhC
Confidence 45679999999999999998887754
No 141
>4ehx_A Tetraacyldisaccharide 4'-kinase; membrane protein, lipid A, P-loop, P-loop containing nucleoside triphosphate hydrolase; HET: EPE; 1.90A {Aquifex aeolicus} PDB: 4ehy_A* 4ehw_A
Probab=25.14 E-value=30 Score=30.26 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=26.5
Q ss_pred CCeEEEEcCCC-----chHHHHHHHHHHHHHHhcCCCCcEEEEEeeec
Q psy10839 16 KKSVLFLCRDN-----YMRSPMIKSLFKEMLAMANQTNEWIVESAGIG 58 (232)
Q Consensus 16 ~~~ILFVCtgN-----icRSpmAEailr~l~~~~gl~~~i~V~SAG~~ 58 (232)
...|=.||.|| +.-+||++++.+.+- + .++-|-|.|-.
T Consensus 33 ~~~vPVI~VGNitvGGTGKTP~vi~L~~~L~-~----~~~~ilsRGYg 75 (315)
T 4ehx_A 33 KLPVPVISVGNLSVGGSGKTSFVMYLADLLK-D----KRVCILSRGYK 75 (315)
T ss_dssp CCSSCEEEEEESBSSCCSHHHHHHHHHHHTT-T----SCEEEEECCCS
T ss_pred cCCCCEEEECCEEeCCCChHHHHHHHHHHHh-h----cCceEEeeccc
Confidence 34455666655 679999999998773 2 24678888753
No 142
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=25.03 E-value=17 Score=30.47 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+...||..|-..|+.+ |. .++.+..+|+..|
T Consensus 78 ~~~~ivvyc~~g~~~s~~a~~~L~~~----G~-~~v~~l~GG~~~W 118 (285)
T 1uar_A 78 NDTTVVLYGDKNNWWAAYAFWFFKYN----GH-KDVRLMNGGRQKW 118 (285)
T ss_dssp TTCEEEEECHHHHHHHHHHHHHHHHT----TC-SCEEEETTHHHHH
T ss_pred CCCeEEEECCCCCccHHHHHHHHHHc----CC-CCeEEecCCHHHH
Confidence 45789999987666888877777654 54 4688888888654
No 143
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.69 E-value=57 Score=27.81 Aligned_cols=66 Identities=15% Similarity=0.149 Sum_probs=35.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccCCc
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFYKF 96 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~~a 96 (232)
.||-||..||-. +|||..++++ |. .+.|. + .++...+.+.+.|......+ .+.+..+
T Consensus 6 ~kIgfIGLG~MG-~~mA~~L~~~-----G~--~V~v~-------d----r~~~~~~~l~~~G~~~~~s~----~e~~~~~ 62 (297)
T 4gbj_A 6 EKIAFLGLGNLG-TPIAEILLEA-----GY--ELVVW-------N----RTASKAEPLTKLGATVVENA----IDAITPG 62 (297)
T ss_dssp CEEEEECCSTTH-HHHHHHHHHT-----TC--EEEEC------------------CTTTTTTCEECSSG----GGGCCTT
T ss_pred CcEEEEecHHHH-HHHHHHHHHC-----CC--eEEEE-------e----CCHHHHHHHHHcCCeEeCCH----HHHHhcC
Confidence 489999999987 4788766543 22 23322 1 33344444455554431111 2346788
Q ss_pred cEEEEecCC
Q psy10839 97 DYIIATDET 105 (232)
Q Consensus 97 DlII~Md~~ 105 (232)
|+||+|-..
T Consensus 63 dvvi~~l~~ 71 (297)
T 4gbj_A 63 GIVFSVLAD 71 (297)
T ss_dssp CEEEECCSS
T ss_pred Cceeeeccc
Confidence 999988754
No 144
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=24.52 E-value=57 Score=24.24 Aligned_cols=23 Identities=17% Similarity=0.314 Sum_probs=18.9
Q ss_pred CCCeEEEEcCCCchHHH-HHHHHH
Q psy10839 15 GKKSVLFLCRDNYMRSP-MIKSLF 37 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSp-mAEail 37 (232)
....||+=|.+...||. ++-+++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl 107 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYL 107 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHH
Confidence 45789999999999999 665654
No 145
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=24.32 E-value=48 Score=27.25 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=31.8
Q ss_pred eEEEEcCCCchHHHHHHHHHHHHHHhc------CCCCcEEEEEeeeccCC
Q psy10839 18 SVLFLCRDNYMRSPMIKSLFKEMLAMA------NQTNEWIVESAGIGWWD 61 (232)
Q Consensus 18 ~ILFVCtgNicRSpmAEailr~l~~~~------gl~~~i~V~SAG~~~~~ 61 (232)
.|+|.|...--||+.|..+|+...... |. ..+.+-.+|+..|.
T Consensus 126 ~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf-~~V~~L~GG~~aW~ 174 (216)
T 3op3_A 126 IIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYY-PELYILKGGYRDFF 174 (216)
T ss_dssp EEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSC-CCEEEETTHHHHHT
T ss_pred EEEEEeCCCChHHHHHHHHHHHcCcccccccccCC-CcEEEECCcHHHHH
Confidence 499999967789999999998875322 33 36888889998873
No 146
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=24.16 E-value=2.1e+02 Score=23.76 Aligned_cols=30 Identities=10% Similarity=0.064 Sum_probs=16.9
Q ss_pred ccccCCCeEEEEcCCCchHHHHHHHHHHHHH
Q psy10839 11 FLFEGKKSVLFLCRDNYMRSPMIKSLFKEML 41 (232)
Q Consensus 11 ~~~~~~~~ILFVCtgNicRSpmAEailr~l~ 41 (232)
+-|+.+||||||+. +..-.-.+..+++.+.
T Consensus 3 ~~m~~~mkIl~v~~-~~~~~~~~~~l~~~L~ 32 (375)
T 3beo_A 3 VDMTERLKVMTIFG-TRPEAIKMAPLVLELQ 32 (375)
T ss_dssp CCCSSCEEEEEEEC-SHHHHHHHHHHHHHHT
T ss_pred CCCCcCceEEEEec-CcHHHHHHHHHHHHHH
Confidence 44667789999983 3322223344555553
No 147
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.11 E-value=88 Score=25.67 Aligned_cols=80 Identities=11% Similarity=0.098 Sum_probs=45.0
Q ss_pred cCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccC---
Q psy10839 14 EGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREIT--- 89 (232)
Q Consensus 14 ~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt--- 89 (232)
|.+++|.++..|+ ...+++++..... .++ ..+| +++... .++....+.++++||+. ...++.+.
T Consensus 5 m~~~ri~vl~SG~---gsnl~all~~~~~-~~l--~~~I--~~Visn----~~~a~~l~~A~~~gIp~~~~~~~~~~~r~ 72 (209)
T 4ds3_A 5 MKRNRVVIFISGG---GSNMEALIRAAQA-PGF--PAEI--VAVFSD----KAEAGGLAKAEAAGIATQVFKRKDFASKE 72 (209)
T ss_dssp -CCEEEEEEESSC---CHHHHHHHHHHTS-TTC--SEEE--EEEEES----CTTCTHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred CCCccEEEEEECC---cHHHHHHHHHHHc-CCC--CcEE--EEEEEC----CcccHHHHHHHHcCCCEEEeCccccCCHH
Confidence 4566777666665 3457777777642 122 1333 344432 24556678899999997 33322221
Q ss_pred ---cc---cc--CCccEEEEecCC
Q psy10839 90 ---KD---DF--YKFDYIIATDET 105 (232)
Q Consensus 90 ---~~---dl--~~aDlII~Md~~ 105 (232)
++ .+ .+.|+||+..-.
T Consensus 73 ~~d~~~~~~l~~~~~Dliv~agy~ 96 (209)
T 4ds3_A 73 AHEDAILAALDVLKPDIICLAGYM 96 (209)
T ss_dssp HHHHHHHHHHHHHCCSEEEESSCC
T ss_pred HHHHHHHHHHHhcCCCEEEEeccc
Confidence 11 11 358999998753
No 148
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=23.96 E-value=35 Score=28.27 Aligned_cols=41 Identities=15% Similarity=0.199 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+..-||..|-.+|+.+ |. .++.+..+|+..|
T Consensus 76 ~~~~vvvyc~~g~~~s~~a~~~L~~~----G~-~~v~~l~GG~~~W 116 (277)
T 3aay_A 76 NEDTVILYGGNNNWFAAYAYWYFKLY----GH-EKVKLLDGGRKKW 116 (277)
T ss_dssp TTSEEEEECSGGGHHHHHHHHHHHHT----TC-CSEEEETTHHHHH
T ss_pred CCCeEEEECCCCCchHHHHHHHHHHc----CC-CcEEEecCCHHHH
Confidence 34689999987645677776666554 54 4688888888665
No 149
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=23.95 E-value=73 Score=22.67 Aligned_cols=47 Identities=9% Similarity=0.141 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 30 SPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 30 SpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
||-++..++++.+ ...+.|+|-|+... .+=|--..|.+.|.++|++.
T Consensus 4 s~~~~~~v~~~i~----~~~Vvvy~k~t~~~-p~Cp~C~~ak~~L~~~gi~~ 50 (109)
T 3ipz_A 4 TPQLKDTLEKLVN----SEKVVLFMKGTRDF-PMCGFSNTVVQILKNLNVPF 50 (109)
T ss_dssp CHHHHHHHHHHHT----SSSEEEEESBCSSS-BSSHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHc----cCCEEEEEecCCCC-CCChhHHHHHHHHHHcCCCc
Confidence 4556667777776 46799999986432 23345678889999999875
No 150
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=23.83 E-value=84 Score=26.78 Aligned_cols=76 Identities=13% Similarity=0.206 Sum_probs=43.6
Q ss_pred ccccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCC-HHHHHHHHHcCCCCCCceec
Q psy10839 9 GGFLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMD-PRAKERCEMYGLDTEHVVRE 87 (232)
Q Consensus 9 ~~~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~d-p~Ai~vL~e~GIdl~hrsr~ 87 (232)
.++.+++|+||-+|..|++.+.-++.++.+ .+++++. |+.. .+ ..+.+..+++|++- .
T Consensus 16 ~n~~~~~mirigiIG~G~ig~~~~~~~~~~--------~~~~~lv--av~d------~~~~~a~~~a~~~g~~~-----~ 74 (350)
T 4had_A 16 ENLYFQSMLRFGIISTAKIGRDNVVPAIQD--------AENCVVT--AIAS------RDLTRAREMADRFSVPH-----A 74 (350)
T ss_dssp ------CCEEEEEESCCHHHHHTHHHHHHH--------CSSEEEE--EEEC------SSHHHHHHHHHHHTCSE-----E
T ss_pred ccccccCccEEEEEcChHHHHHHHHHHHHh--------CCCeEEE--EEEC------CCHHHHHHHHHHcCCCe-----e
Confidence 346677889999999999887765554422 1356654 3332 23 45666778889862 1
Q ss_pred cC--cccc--CCccEEEEecCC
Q psy10839 88 IT--KDDF--YKFDYIIATDET 105 (232)
Q Consensus 88 lt--~~dl--~~aDlII~Md~~ 105 (232)
.+ ++.+ .+.|.|++.+..
T Consensus 75 y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 75 FGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp ESSHHHHHHCSSCSEEEECSCG
T ss_pred eCCHHHHhcCCCCCEEEEeCCC
Confidence 22 1222 457999888764
No 151
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=23.71 E-value=48 Score=26.72 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=29.9
Q ss_pred CCeE--EEEcCCCchHHHHHHHHHHHH------HHhcCCCCcEEEEEeeeccC
Q psy10839 16 KKSV--LFLCRDNYMRSPMIKSLFKEM------LAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 16 ~~~I--LFVCtgNicRSpmAEailr~l------~~~~gl~~~i~V~SAG~~~~ 60 (232)
...| +|.|...-.||+.|..+|++. +...|. .++.+..+|+..|
T Consensus 109 d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~-~~V~~L~GG~~~W 160 (211)
T 1qb0_A 109 DKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYY-PEMYILKGGYKEF 160 (211)
T ss_dssp TSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSC-CCEEEETTHHHHH
T ss_pred CCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCC-CeEEEECCHHHHH
Confidence 4566 445873345999998888764 223465 3688888999877
No 152
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=22.84 E-value=25 Score=30.88 Aligned_cols=88 Identities=8% Similarity=0.044 Sum_probs=46.7
Q ss_pred CeEEEEcCCCchHHHHHHHHHH------HHHHh-cCCCCcEEEEEeeeccCCCCC---CCCHHHHHHHHHc--CCCC-C-
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFK------EMLAM-ANQTNEWIVESAGIGWWDVGK---GMDPRAKERCEMY--GLDT-E- 82 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr------~l~~~-~gl~~~i~V~SAG~~~~~~G~---~~dp~Ai~vL~e~--GIdl-~- 82 (232)
.+++|+.-..+.-.|-+|.+.+ ..++. .|+.+++-+-|+|.... .+. ..--.|.+.+++. |+.+ +
T Consensus 164 ~~~~~~tD~~vn~~pt~e~l~~ia~~~~~~~~~~~Gi~PrVAlLs~ge~g~-~~~~~~~~v~~A~~ll~~~~~~~~v~Gp 242 (333)
T 2af4_C 164 DGTFLFADSGMVEMPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGS-AKSKLTEATIASTKLAQELAPDIAIDGE 242 (333)
T ss_dssp TTEEEEETSSSCSSCCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTS-CCSHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCeEEEEeCcccCCCCHHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCC-CCCCCcHHHHHHHHHHhccCCCcEEEec
Confidence 4555555333333344444432 23334 47778999999987543 121 1233456666665 6655 3
Q ss_pred Ccee-ccC----------ccccCCccEEEEecCC
Q psy10839 83 HVVR-EIT----------KDDFYKFDYIIATDET 105 (232)
Q Consensus 83 hrsr-~lt----------~~dl~~aDlII~Md~~ 105 (232)
..+. .+. ...-.++|++|+|+-.
T Consensus 243 l~~D~a~~~~~~~~k~~~s~~~G~aDvlV~pd~d 276 (333)
T 2af4_C 243 LQVDAAIVPKVAASKAPGSPVAGKANVFIFPDLN 276 (333)
T ss_dssp ECHHHHHCHHHHHHHSTTCSSTTSCCEEECSSHH
T ss_pred CcHHHhcCHHHHHhcCCCCccCCcCCEEEECCch
Confidence 1111 111 1222689999999864
No 153
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=22.78 E-value=1.3e+02 Score=25.30 Aligned_cols=69 Identities=10% Similarity=0.092 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCH-HHHHHHHHcCCCC-CCceeccCcccc
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDP-RAKERCEMYGLDT-EHVVREITKDDF 93 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp-~Ai~vL~e~GIdl-~hrsr~lt~~dl 93 (232)
+++|.||..||+.+.-++.++.+. .++++. . .. .++ .+.+..+++|++. -... .+.+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~--------~~~~l~-v--~d------~~~~~~~~~a~~~g~~~~~~~~----~~~l 60 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW--------PDIELV-L--CT------RNPKVLGTLATRYRVSATCTDY----RDVL 60 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS--------TTEEEE-E--EC------SCHHHHHHHHHHTTCCCCCSST----TGGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC--------CCceEE-E--Ee------CCHHHHHHHHHHcCCCccccCH----HHHh
Confidence 469999999997765555554321 245655 2 11 233 4445667788763 1111 1233
Q ss_pred -CCccEEEEecCC
Q psy10839 94 -YKFDYIIATDET 105 (232)
Q Consensus 94 -~~aDlII~Md~~ 105 (232)
.+.|+|+.....
T Consensus 61 ~~~~D~V~i~tp~ 73 (323)
T 1xea_A 61 QYGVDAVMIHAAT 73 (323)
T ss_dssp GGCCSEEEECSCG
T ss_pred hcCCCEEEEECCc
Confidence 578999998864
No 154
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=22.77 E-value=1.9e+02 Score=24.66 Aligned_cols=71 Identities=8% Similarity=-0.041 Sum_probs=38.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCC--------Cceec
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTE--------HVVRE 87 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~--------hrsr~ 87 (232)
|++|.||..||... +||..+.+ .+.+|.= .. .++..++.+.+.|.... ...+.
T Consensus 15 M~kI~iIG~G~mG~-~la~~L~~---------~G~~V~~--~~-------r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 75 (366)
T 1evy_A 15 LNKAVVFGSGAFGT-ALAMVLSK---------KCREVCV--WH-------MNEEEVRLVNEKRENVLFLKGVQLASNITF 75 (366)
T ss_dssp EEEEEEECCSHHHH-HHHHHHTT---------TEEEEEE--EC-------SCHHHHHHHHHHTBCTTTSTTCBCCTTEEE
T ss_pred cCeEEEECCCHHHH-HHHHHHHh---------CCCEEEE--EE-------CCHHHHHHHHHcCcccccccccccccceee
Confidence 34899999998764 45544432 1233321 11 34555666766653221 11111
Q ss_pred c-Cc-cccCCccEEEEecCC
Q psy10839 88 I-TK-DDFYKFDYIIATDET 105 (232)
Q Consensus 88 l-t~-~dl~~aDlII~Md~~ 105 (232)
. +. +.+..+|+||.+-..
T Consensus 76 ~~~~~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 76 TSDVEKAYNGAEIILFVIPT 95 (366)
T ss_dssp ESCHHHHHTTCSSEEECCCH
T ss_pred eCCHHHHHcCCCEEEECCCh
Confidence 1 12 236789999988865
No 155
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=22.57 E-value=1e+02 Score=23.79 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=40.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHH--HHHHHHcCCCCCCceeccCc---c
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRA--KERCEMYGLDTEHVVREITK---D 91 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~A--i~vL~e~GIdl~hrsr~lt~---~ 91 (232)
++-++++-|.+.|+- |...+++++++.|++ +.....|-......+| .+.. +-.+-.+|-+ . .. +
T Consensus 35 krPvil~G~g~~~~~-a~~~l~~lae~~~iP--V~~t~~gkg~~~~~hp-~~~~~~~G~~G~~~~~------~-~~~~~~ 103 (170)
T 3cf4_G 35 KRPLLMVGTLALDPE-LLDRVVKISKAANIP--IAATGSSLAVLADKDV-DAKYINAHMLGFYLTD------P-KWPGLD 103 (170)
T ss_dssp SSEEEEECSTTCCHH-HHHHHHHHHHHHTCC--EEECTTTHHHHTTSSS-CEEECCHHHHHHHTTC------T-TCCCSS
T ss_pred CCCEEEECCCccchh-HHHHHHHHHHHhCCC--EEECcccCcccCCCCh-hhhcceeeeccccCCh------h-hhhHHH
Confidence 456666666666665 445567888887876 3322222222211222 0021 2222222211 1 11 3
Q ss_pred ccCCccEEEEecCCc
Q psy10839 92 DFYKFDYIIATDETD 106 (232)
Q Consensus 92 dl~~aDlII~Md~~~ 106 (232)
.++++|+||++...-
T Consensus 104 ~~~~aDlvl~iG~~~ 118 (170)
T 3cf4_G 104 GNGNYDMIITIGFKK 118 (170)
T ss_dssp SSCCCSEEEEESCCH
T ss_pred HhhcCCEEEEECCcc
Confidence 478899999999653
No 156
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=22.57 E-value=62 Score=28.45 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=38.6
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCCCCceeccCccccC-
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDTEHVVREITKDDFY- 94 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl~hrsr~lt~~dl~- 94 (232)
.++|.||..|++..| ||.++.+ .|. .+. |. ..++...+.+.+.|+... ..+ .+.+.
T Consensus 8 ~~kIgIIG~G~mG~s-lA~~L~~-----~G~--~V~----~~-------dr~~~~~~~a~~~G~~~~---~~~-~e~~~~ 64 (341)
T 3ktd_A 8 SRPVCILGLGLIGGS-LLRDLHA-----ANH--SVF----GY-------NRSRSGAKSAVDEGFDVS---ADL-EATLQR 64 (341)
T ss_dssp SSCEEEECCSHHHHH-HHHHHHH-----TTC--CEE----EE-------CSCHHHHHHHHHTTCCEE---SCH-HHHHHH
T ss_pred CCEEEEEeecHHHHH-HHHHHHH-----CCC--EEE----EE-------eCCHHHHHHHHHcCCeee---CCH-HHHHHh
Confidence 568999999998865 4444432 232 232 22 145667777888888431 111 11122
Q ss_pred ---CccEEEEecCC
Q psy10839 95 ---KFDYIIATDET 105 (232)
Q Consensus 95 ---~aDlII~Md~~ 105 (232)
.+|+||.+-..
T Consensus 65 a~~~aDlVilavP~ 78 (341)
T 3ktd_A 65 AAAEDALIVLAVPM 78 (341)
T ss_dssp HHHTTCEEEECSCH
T ss_pred cccCCCEEEEeCCH
Confidence 46998888764
No 157
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=22.37 E-value=37 Score=28.64 Aligned_cols=40 Identities=13% Similarity=0.108 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|.|.+. .||..|..+|+.+ |. .++.+..+|+..|
T Consensus 239 ~~~~ivv~C~sG-~rs~~a~~~L~~~----G~-~~v~~~~GG~~~W 278 (296)
T 1rhs_A 239 LTKPLIATCRKG-VTACHIALAAYLC----GK-PDVAIYDGSWFEW 278 (296)
T ss_dssp TTSCEEEECSSS-STHHHHHHHHHHT----TC-CCCEEESSHHHHH
T ss_pred CCCCEEEECCcH-HHHHHHHHHHHHc----CC-CCceeeCCcHHHH
Confidence 456799999875 6888887777643 55 3678888888776
No 158
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_2* 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=22.25 E-value=87 Score=25.12 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=33.0
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCC-------CCcEEEEEeeec
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQ-------TNEWIVESAGIG 58 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl-------~~~i~V~SAG~~ 58 (232)
+..++||+|-.|.+-=|+.+++++-++.|. .+.+.+...|..
T Consensus 77 k~~I~VC~gt~C~~~Ga~~i~~~l~~~L~i~~gett~Dg~~tl~~~~Cl 125 (181)
T 3i9v_2 77 KYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECL 125 (181)
T ss_dssp SEEEEEECSHHHHTTTHHHHHHHHHHHHTCCTTCCCTTSCEEEEEESCC
T ss_pred CEEEEECCCchhhhcCHHHHHHHHHHHhCcCCCCcCCCCcEEEEEcCCC
Confidence 579999999999999899998888776654 235778776654
No 159
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=22.00 E-value=1.3e+02 Score=26.44 Aligned_cols=70 Identities=13% Similarity=0.168 Sum_probs=40.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCH-HHHHHHHHc----CCCCCCceeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDP-RAKERCEMY----GLDTEHVVREIT 89 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp-~Ai~vL~e~----GIdl~hrsr~lt 89 (232)
..++|+||..|+..|+. +++++.. .+. ..+.|.+ .++ .+.+..++. |++. ...+
T Consensus 128 ~~~~v~iIGaG~~a~~~-a~al~~~----~~~-~~V~V~~-----------r~~~~a~~la~~~~~~~g~~~----~~~~ 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQ-ALAFHKH----LGI-EEIVAYD-----------TDPLATAKLIANLKEYSGLTI----RRAS 186 (350)
T ss_dssp TCCEEEEECCSTTHHHH-HHHHHHH----SCC-CEEEEEC-----------SSHHHHHHHHHHHTTCTTCEE----EECS
T ss_pred cCCeEEEECCcHHHHHH-HHHHHHh----CCC-cEEEEEc-----------CCHHHHHHHHHHHHhccCceE----EEeC
Confidence 35789999999999964 4555432 222 3454443 223 333333443 4432 1111
Q ss_pred --ccccCCccEEEEecCC
Q psy10839 90 --KDDFYKFDYIIATDET 105 (232)
Q Consensus 90 --~~dl~~aDlII~Md~~ 105 (232)
++.+.++|+|++.+..
T Consensus 187 ~~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 SVAEAVKGVDIITTVTAD 204 (350)
T ss_dssp SHHHHHTTCSEEEECCCC
T ss_pred CHHHHHhcCCEEEEeccC
Confidence 2446789999999875
No 160
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=21.95 E-value=41 Score=27.94 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCCchH-HHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMR-SPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicR-SpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|.|.++ +| |..|..+|+.+ |. .++.+..+|+..|
T Consensus 85 ~~~~ivvyc~~g-~~~a~~a~~~L~~~----G~-~~v~~l~GG~~~W 125 (280)
T 1urh_A 85 QDKHLIVYDEGN-LFSAPRAWWMLRTF----GV-EKVSILGGGLAGW 125 (280)
T ss_dssp TTSEEEEECSSS-CSSHHHHHHHHHHT----TC-SCEEEETTHHHHH
T ss_pred CCCeEEEECCCC-CccHHHHHHHHHHc----CC-CCEEEecCCHHHH
Confidence 456899999875 66 87777666654 54 4688888888765
No 161
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=21.78 E-value=61 Score=27.19 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=23.6
Q ss_pred CCccEEEEecCCcHHHHHHhCCCCCCccEEEecc
Q psy10839 94 YKFDYIIATDETDLSFLRLEAPPDSSAQLVKLGT 127 (232)
Q Consensus 94 ~~aDlII~Md~~~~~~L~~~~P~~~~~Kv~ll~~ 127 (232)
..+|.|++.++...+.+.+.++. ..++.++..
T Consensus 139 ~~~d~ii~~s~~~~~~~~~~~~~--~~~~~vi~n 170 (394)
T 3okp_A 139 TEVDVLTYISQYTLRRFKSAFGS--HPTFEHLPS 170 (394)
T ss_dssp HHCSEEEESCHHHHHHHHHHHCS--SSEEEECCC
T ss_pred HhCCEEEEcCHHHHHHHHHhcCC--CCCeEEecC
Confidence 56899999998888888877653 356666543
No 162
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=21.37 E-value=37 Score=30.19 Aligned_cols=89 Identities=15% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCchHHHHH----HHHHH------H-HHHhcCCCCcEEEEEeeeccCCCCC---------CCCHHHHHHHH
Q psy10839 16 KKSVLFLCRDNYMRSPMI----KSLFK------E-MLAMANQTNEWIVESAGIGWWDVGK---------GMDPRAKERCE 75 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmA----Eailr------~-l~~~~gl~~~i~V~SAG~~~~~~G~---------~~dp~Ai~vL~ 75 (232)
.++|.+|-++=.-|-... |.+.+ + +.++.|+. .=++-=||+-|. .|+ .+=..|++.++
T Consensus 156 ~LrV~lvT~HipL~~V~~~it~e~i~~~i~~~~~~L~~~fgi~-~PrIaV~GLNPH-AGE~G~~G~EE~~iI~Pai~~~r 233 (328)
T 1yxo_A 156 GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIA-HPRILVCGLNPH-AGEGGHLGREEIEVIEPCLERLR 233 (328)
T ss_dssp TEEEEESSCSCCHHHHHHHCCHHHHHHHHHHHHHHHHHTTCCS-SCEEEEECSSGG-GGTTTTTCSHHHHTHHHHHHHHH
T ss_pred CcEEEEeccCccHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-CCCEEEEecCCC-CCCCCCCCHhHHHHHHHHHHHHH
Confidence 577888866544433221 22222 2 22234663 446788899874 332 23445788889
Q ss_pred HcCCCC-C-Cceecc-CccccCCccEEEEecCCc
Q psy10839 76 MYGLDT-E-HVVREI-TKDDFYKFDYIIATDETD 106 (232)
Q Consensus 76 e~GIdl-~-hrsr~l-t~~dl~~aDlII~Md~~~ 106 (232)
+.||++ + ..+-.+ ......+||.||+|-..|
T Consensus 234 ~~Gi~~~GP~paDT~F~~~~~~~~D~vlaMYHDQ 267 (328)
T 1yxo_A 234 GEGLDLIGPLPADTLFTPKHLEHCDAVLAMYHDQ 267 (328)
T ss_dssp TTTCEEEEEECHHHHTSHHHHTTCSEEEESSHHH
T ss_pred HCCCceeCCCCchhhcccccccCCCEEEEccccc
Confidence 999998 4 544443 455678999999998654
No 163
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.24 E-value=1.1e+02 Score=25.00 Aligned_cols=86 Identities=8% Similarity=-0.041 Sum_probs=45.1
Q ss_pred eEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCc------
Q psy10839 18 SVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITK------ 90 (232)
Q Consensus 18 ~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~------ 90 (232)
||.++..||- ...++++..... +...++-+++... +.++...+.++++||+. -..++.+..
T Consensus 2 riaVl~SG~G---s~L~aLi~~~~~-----~~~~~~I~~Vvs~----~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~ 69 (209)
T 1meo_A 2 RVAVLISGTG---SNLQALIDSTRE-----PNSSAQIDIVISN----KAAVAGLDKAERAGIPTRVINHKLYKNRVEFDS 69 (209)
T ss_dssp EEEEEESSSC---TTHHHHHHHHHS-----TTCSCEEEEEEES----STTCHHHHHHHHTTCCEEECCGGGSSSHHHHHH
T ss_pred eEEEEEECCc---hHHHHHHHHHhc-----CCCCcEEEEEEeC----CCChHHHHHHHHcCCCEEEECccccCchhhhhH
Confidence 4444444443 245566655432 1111233455432 35677888899999997 333333321
Q ss_pred ---ccc--CCccEEEEecCCcH--HHHHHhCC
Q psy10839 91 ---DDF--YKFDYIIATDETDL--SFLRLEAP 115 (232)
Q Consensus 91 ---~dl--~~aDlII~Md~~~~--~~L~~~~P 115 (232)
+.+ .+.|+||+..-... ..+.+.++
T Consensus 70 ~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~ 101 (209)
T 1meo_A 70 AIDLVLEEFSIDIVCLAGFMRILSGPFVQKWN 101 (209)
T ss_dssp HHHHHHHHTTCCEEEEESCCSCCCHHHHHHTT
T ss_pred HHHHHHHhcCCCEEEEcchhhhCCHHHHhhhc
Confidence 111 36799999885432 33445444
No 164
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=21.17 E-value=59 Score=27.87 Aligned_cols=42 Identities=7% Similarity=-0.012 Sum_probs=27.8
Q ss_pred hccccccCCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeee
Q psy10839 8 WGGFLFEGKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGI 57 (232)
Q Consensus 8 ~~~~~~~~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~ 57 (232)
+.-|+....++||+|..|++ |...++.+++ . +..+.|.+--.
T Consensus 5 lpl~~~l~~k~VLVVGgG~v-----a~rka~~Ll~-~--Ga~VtViap~~ 46 (274)
T 1kyq_A 5 LQLAHQLKDKRILLIGGGEV-----GLTRLYKLMP-T--GCKLTLVSPDL 46 (274)
T ss_dssp EEEEECCTTCEEEEEEESHH-----HHHHHHHHGG-G--TCEEEEEEEEE
T ss_pred eeEEEEcCCCEEEEECCcHH-----HHHHHHHHHh-C--CCEEEEEcCCC
Confidence 44456666789999999974 5555555553 3 34688887544
No 165
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=21.11 E-value=45 Score=30.93 Aligned_cols=40 Identities=8% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccC
Q psy10839 15 GKKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWW 60 (232)
Q Consensus 15 ~~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~ 60 (232)
+...|+|+|.+.. ||+.|...|+.+ |. .++.+..+|+..|
T Consensus 62 ~~~~iVvyc~~g~-~s~~a~~~L~~~----G~-~~V~~L~GG~~~W 101 (539)
T 1yt8_A 62 RDTPITVYDDGEG-LAPVAAQRLHDL----GY-SDVALLDGGLSGW 101 (539)
T ss_dssp TTSCEEEECSSSS-HHHHHHHHHHHT----TC-SSEEEETTHHHHH
T ss_pred CCCeEEEEECCCC-hHHHHHHHHHHc----CC-CceEEeCCCHHHH
Confidence 4578999998876 999888887765 44 4788888888665
No 166
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=21.02 E-value=89 Score=25.08 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=27.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEee
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAG 56 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG 56 (232)
...|+|+|.+...||..|-.+|+ + |. .++.+..+|
T Consensus 61 ~~~ivvyc~~g~~~s~~a~~~L~-~----G~-~~v~~l~GG 95 (230)
T 2eg4_A 61 RSPVVLYDEGLTSRLCRTAFFLG-L----GG-LEVQLWTEG 95 (230)
T ss_dssp CSSEEEECSSSCHHHHHHHHHHH-H----TT-CCEEEECSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHH-c----CC-ceEEEeCCC
Confidence 46799999887789988877776 4 44 468888888
No 167
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=20.69 E-value=1.1e+02 Score=22.28 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC
Q psy10839 30 SPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT 81 (232)
Q Consensus 30 SpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl 81 (232)
|+-+...++++++ .+.+.|+|-|+... .+=|--..|.+.|.++|++.
T Consensus 2 ~~~~~~~v~~~i~----~~~Vvvfsk~t~~~-p~Cp~C~~ak~lL~~~gv~~ 48 (121)
T 3gx8_A 2 STEIRKAIEDAIE----SAPVVLFMKGTPEF-PKCGFSRATIGLLGNQGVDP 48 (121)
T ss_dssp CHHHHHHHHHHHH----SCSEEEEESBCSSS-BCTTHHHHHHHHHHHHTBCG
T ss_pred CHHHHHHHHHHhc----cCCEEEEEeccCCC-CCCccHHHHHHHHHHcCCCc
Confidence 3456667777776 46799999996432 23356678899999999873
No 168
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.66 E-value=1.1e+02 Score=25.90 Aligned_cols=70 Identities=9% Similarity=-0.004 Sum_probs=40.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CC---ceeccC--
Q psy10839 16 KKSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EH---VVREIT-- 89 (232)
Q Consensus 16 ~~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~h---rsr~lt-- 89 (232)
+|+|+||..|++.. -+|..+. .| .++.+.. -++...+.+++.|+.+ .. .+..++
T Consensus 2 ~mkI~IiGaGa~G~-~~a~~L~------~g--~~V~~~~-----------r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~ 61 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-LCAYYLS------LY--HDVTVVT-----------RRQEQAAAIQSEGIRLYKGGEEFRADCSAD 61 (307)
T ss_dssp CCEEEEECCSHHHH-HHHHHHH------TT--SEEEEEC-----------SCHHHHHHHHHHCEEEEETTEEEEECCEEE
T ss_pred CCEEEEECCCHHHH-HHHHHHh------cC--CceEEEE-----------CCHHHHHHHHhCCceEecCCCeeccccccc
Confidence 36999999999885 4444332 22 2343322 1244456677788765 21 222222
Q ss_pred ccccCCccEEEEecCC
Q psy10839 90 KDDFYKFDYIIATDET 105 (232)
Q Consensus 90 ~~dl~~aDlII~Md~~ 105 (232)
.+....+|+||...+.
T Consensus 62 ~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 62 TSINSDFDLLVVTVKQ 77 (307)
T ss_dssp SSCCSCCSEEEECCCG
T ss_pred ccccCCCCEEEEEeCH
Confidence 2446789999988765
No 169
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=20.62 E-value=1.1e+02 Score=28.88 Aligned_cols=76 Identities=11% Similarity=0.122 Sum_probs=45.8
Q ss_pred CeEEEEcCCCchHHHHHHHHHHHHHHhcCCCCcEEEEEeeeccCCCCCCCCHHHHHHHHHcCCCC-CCceeccCccccCC
Q psy10839 17 KSVLFLCRDNYMRSPMIKSLFKEMLAMANQTNEWIVESAGIGWWDVGKGMDPRAKERCEMYGLDT-EHVVREITKDDFYK 95 (232)
Q Consensus 17 ~~ILFVCtgNicRSpmAEailr~l~~~~gl~~~i~V~SAG~~~~~~G~~~dp~Ai~vL~e~GIdl-~hrsr~lt~~dl~~ 95 (232)
++|.||..||+..| ||..+.+.+. +.|.+ +.|. .|... ++...+.+.+.|+.. +.....+ .+.+.+
T Consensus 55 KkIgIIGlGsMG~A-mA~nLr~s~~-~~g~G--~~Vi-Vg~r~-------~sks~e~A~e~G~~v~d~ta~s~-aEAa~~ 121 (525)
T 3fr7_A 55 KQIGVIGWGSQGPA-QAQNLRDSLA-EAKSD--IVVK-IGLRK-------GSKSFDEARAAGFTEESGTLGDI-WETVSG 121 (525)
T ss_dssp SEEEEECCTTHHHH-HHHHHHHHHH-HTTCC--CEEE-EEECT-------TCSCHHHHHHTTCCTTTTCEEEH-HHHHHH
T ss_pred CEEEEEeEhHHHHH-HHHHHHhccc-ccCCC--CEEE-EEeCC-------chhhHHHHHHCCCEEecCCCCCH-HHHHhc
Confidence 79999999999864 5666665532 33333 3332 24332 223345566788875 3333333 245678
Q ss_pred ccEEEEecCC
Q psy10839 96 FDYIIATDET 105 (232)
Q Consensus 96 aDlII~Md~~ 105 (232)
+|+||.+-..
T Consensus 122 ADVVILaVP~ 131 (525)
T 3fr7_A 122 SDLVLLLISD 131 (525)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEECCCh
Confidence 9999999865
No 170
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=20.51 E-value=58 Score=19.07 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=14.1
Q ss_pred CCHHHHHHHHHcCCCC
Q psy10839 66 MDPRAKERCEMYGLDT 81 (232)
Q Consensus 66 ~dp~Ai~vL~e~GIdl 81 (232)
+.|.+.+.++++|||+
T Consensus 2 asP~ar~la~e~gidl 17 (40)
T 2eq8_C 2 AAPSIRRLARELGVDL 17 (40)
T ss_dssp CCHHHHHHHHHHTCCG
T ss_pred CChHHHHHHHHhCCCh
Confidence 4688999999999998
Done!