RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10841
(286 letters)
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 306 bits (786), Expect = e-106
Identities = 91/236 (38%), Positives = 130/236 (55%), Gaps = 11/236 (4%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEK--HYFEVYAGML 103
+VGG A+ GAWPW++ LY D CG ++ W+++AAHCV G + G+
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLH 60
Query: 104 RRFSF-SPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
+ + SP R + IV++ + R ND+A++ L + Y Y++PI LP+ +
Sbjct: 61 MKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVF 120
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH--YEDRI-ADVICAGMPQGGR 217
P C+ GWG V G D ++E VP+L C+ E I ++ICAG +GG
Sbjct: 121 PPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGI 180
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
D+CQGDSGGPL+C RW++AGV S G CA PN PGVY RVS+F W+ S
Sbjct: 181 DSCQGDSGGPLMCQE---NNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSF 233
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 298 bits (766), Expect = e-102
Identities = 83/241 (34%), Positives = 138/241 (57%), Gaps = 12/241 (4%)
Query: 46 VVGGKKAELGAWPWLIALYRD---GFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVYAG 101
+VGG ++ G WPW ++L CGG ++ WV+TAAHC DG + +Y+G
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSG 60
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
+L + + I++H +K +E +D+AL++L APL Y + +PI LP +T
Sbjct: 61 ILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDT 120
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH--YEDRI-ADVICAGMPQGG 216
Y+ C GWG E G + +++V +P++ C+ + +I ++CAG +GG
Sbjct: 121 STIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGG 180
Query: 217 RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSNSER 276
+D C+GDSGGPL+C G W + G+ S GEGCAR +PGVYT+V++++ W++ ++
Sbjct: 181 KDACKGDSGGPLVCKH---NGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQS 237
Query: 277 A 277
+
Sbjct: 238 S 238
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 297 bits (764), Expect = e-102
Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 13/236 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
VVGG+ A+ G +PW + L CGG +++E W++TAAHCV+ K V AG
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVK--ITVVAGEHNI 58
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAPLRYNRYVRPICLP--DVTET 161
TEQ R V RI+ H F A T +D+ALL+L PL N YV PIC+ + T
Sbjct: 59 EETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNI 118
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIAD-VICAGMPQGGR 217
+ + GWG VF G ++ ++VP++ C + I + + CAG +GGR
Sbjct: 119 FLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGR 178
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
D+CQGDSGGP + +G ++ G++S GE CA + G+YT+VS++V W+
Sbjct: 179 DSCQGDSGGPHVTE---VEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 297 bits (763), Expect = e-102
Identities = 81/237 (34%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRDG---FFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVYAG 101
+VGG + G WPW + L+ CGG ++ W++TAAHC G E VY+G
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSG 60
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
+L + V I++H +K AE D+ALL+L + Y RPI LP E
Sbjct: 61 ILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGER 120
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH--YEDRI-ADVICAGMPQGG 216
Y+ C GWG + +++ ++P++ C+ +I +ICAG +GG
Sbjct: 121 NVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGG 180
Query: 217 RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
+D C+GDSGGPL C W++ G+ S GEGCA+ PGVYT V ++V W++
Sbjct: 181 KDACKGDSGGPLSCKH---NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 296 bits (761), Expect = e-102
Identities = 82/236 (34%), Positives = 133/236 (56%), Gaps = 13/236 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVYAGMLR 104
+VGG + E G WPW +L DG CG +++ +W+++AAHC ++ + G+
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTI 60
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ P++ R + RI++H +K D++L +L++P+ Y V +CLPD + +P
Sbjct: 61 K----PSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQP 116
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAGMPQGGRD 218
G+GA+ G +H+R+ QV ++ C Y D I ++CAG +G D
Sbjct: 117 GDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTD 176
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSNS 274
CQGDSGGPL+ ++ WY+AG+VS G+ CA+PN+PGVYTRV+ W+ S +
Sbjct: 177 ACQGDSGGPLVS--SDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 230
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 301 bits (773), Expect = e-102
Identities = 93/252 (36%), Positives = 130/252 (51%), Gaps = 17/252 (6%)
Query: 37 GNPILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKH-- 94
G L R+VGG+ LG WPW ++L DG CGG +L WV+TAAHC +
Sbjct: 109 GRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLS 168
Query: 95 YFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT------NDLALLQLAAPLRYNR 148
+ V+AG + + S P V +V H + ND+AL+ L++PL
Sbjct: 169 RWRVFAGAVAQAS--PHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTE 226
Query: 149 YVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDR 203
Y++P+CLP + CT GWG +G ++E +VPI+ C Y ++
Sbjct: 227 YIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQ 286
Query: 204 I-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQ-GRWYVAGVVSHGEGCARPNEPGVYT 261
I + CAG P+GG D CQGDSGGP +C S+ RW + G+VS G GCA +PGVYT
Sbjct: 287 IKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYT 346
Query: 262 RVSQFVPWLMSN 273
+VS F W+
Sbjct: 347 KVSDFREWIFQA 358
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 295 bits (757), Expect = e-101
Identities = 83/240 (34%), Positives = 122/240 (50%), Gaps = 14/240 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFH-CGGVVLDESWVMTAAHCVDGFEKH------YFEV 98
VVGG A+ G WPW ++L+ G H CG ++ +W+++AAHC +
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 99 YAGMLRRFSFS-PTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPD 157
+ G+ + S P Q R + RI+ H F D+ALL+L P Y+ VRPI LPD
Sbjct: 61 FLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPD 120
Query: 158 VTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMP 213
+ GWG G +++ ++ ++ C++ +I +C G
Sbjct: 121 ASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFL 180
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
GG D+CQGDSGGPL + GR + AGVVS G+GCA+ N+PGVYTR+ F W+ N
Sbjct: 181 SGGVDSCQGDSGGPLSS--VEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 295 bits (758), Expect = e-101
Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKH-YFEVYAGMLR 104
+VGGK G PW + L +G CGG +++ WV++AAHC D + G
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHD 60
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVT---ET 161
EQ R V+++++ S + +D+ALL+L P+ +V P+CLP+ T T
Sbjct: 61 LSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERT 120
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIADV-------ICAGM 212
GWG + + G + + VP L C ++ D CAG
Sbjct: 121 LAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGY 180
Query: 213 PQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMS 272
G +D+C+GDSGGP +G WY+ G+VS G+GCA GVYTRVSQ++ WL
Sbjct: 181 SDGSKDSCKGDSGGPHATHY---RGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQK 237
Query: 273 N 273
Sbjct: 238 L 238
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 306 bits (785), Expect = e-101
Identities = 82/240 (34%), Positives = 123/240 (51%), Gaps = 12/240 (5%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDG---FFHCGGVVLDESWVMTAAHCVDGFEK-HYFEV 98
R+VGG + G WPW + L+ CGG ++ W++TAAHC G E V
Sbjct: 385 KPRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRV 444
Query: 99 YAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDV 158
Y+G+L + V I++H +K AE D+ALL+L + Y RPICLP
Sbjct: 445 YSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSK 504
Query: 159 TETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH--YEDRI-ADVICAGMP 213
+ Y+ C GWG + +++ ++P++ C+ +I +ICAG
Sbjct: 505 GDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYR 564
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
+GG+D C+GDSGGPL C W++ G+ S GEGCA+ PGVYT V ++V W++
Sbjct: 565 EGGKDACKGDSGGPLSCKH---NEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 621
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 293 bits (752), Expect = e-100
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 13/236 (5%)
Query: 46 VVGGKKAELGAWPWLIALY-RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
+VGG++ + G PW L + CGG +L E +++TAAHC+ ++ F+V G
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL--YQAKRFKVRVGDRN 58
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDV---TET 161
E V V ++ H+ F + D+A+L+L P+ + V P CLP+ T
Sbjct: 59 TEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAEST 118
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIAD-VICAGMPQGGR 217
T G+G E G ++ ++VP + +CK I + CAG
Sbjct: 119 LMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQE 178
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
D CQGDSGGP + + ++V G+VS GEGCAR + G+YT+V+ F+ W+ +
Sbjct: 179 DACQGDSGGPHVTR---FKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRS 231
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 292 bits (750), Expect = e-100
Identities = 87/239 (36%), Positives = 128/239 (53%), Gaps = 18/239 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGF-EKHYFEVYAGMLR 104
+ GG A G WPW +++ +G CGG ++ E WV++AAHC K +EV G +
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQ 60
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
S+S +V + I+ H + + D+ALLQL+ P+ ++RY+RPI LP +
Sbjct: 61 LDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPN 120
Query: 165 YSTCTAVGWGAVFEHG--PDPDHMREVQVPILP--ACKHYEDRIA----------DVICA 210
CT GWG V P +++++VP++ C + A D++CA
Sbjct: 121 GLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCA 180
Query: 211 GMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
G +GG+D CQGDSGGPL CPV +G WY+ G+VS G+ C N PGVYT S + W
Sbjct: 181 GYVEGGKDACQGDSGGPLSCPV---EGLWYLTGIVSWGDACGARNRPGVYTLASSYASW 236
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 290 bits (745), Expect = 1e-99
Identities = 92/241 (38%), Positives = 132/241 (54%), Gaps = 17/241 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRD----GFFHCGGVVLDESWVMTAAHCVDGFEKH---YFEV 98
+VGG A LG +P+ ++ F CG + +E++ +TA HCV G + ++
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60
Query: 99 YAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDV 158
AG L +EQ+ VS+I++H F + ND++LL+L+ L +N V PI LP
Sbjct: 61 VAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALP-- 118
Query: 159 TETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH--YEDRIADV-ICAGMP 213
+ GWG E G PD +++V VP++ C+ D I D ICAG+P
Sbjct: 119 EQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVP 178
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
+GG+D+CQGDSGGPL G Y+AG+VS G GCARP PGVYT VS V W+ +N
Sbjct: 179 EGGKDSCQGDSGGPLAAS---DTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235
Query: 274 S 274
+
Sbjct: 236 A 236
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 284 bits (730), Expect = 3e-97
Identities = 75/238 (31%), Positives = 111/238 (46%), Gaps = 14/238 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRD--GFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGML 103
+VGG +A +PW +++ R CGG ++++ WV+ AAHC+ G + G
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEH 60
Query: 104 RRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPE 163
+ S Q V I ++ + A + ND+++++ A + ++ V PIC PD
Sbjct: 61 DSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDY- 119
Query: 164 PYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK--HYEDRIADV-ICAGMPQG-- 215
Y GWG + G P +R V + I C + D I D ICA G
Sbjct: 120 VYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMT 179
Query: 216 GRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
RD+CQGDSGGPL G + + G+VS G GCA PGVY+RV W+
Sbjct: 180 DRDSCQGDSGGPLSV--KDGSGIFSLVGIVSWGIGCAS-GYPGVYSRVGFHAGWITDT 234
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 286 bits (733), Expect = 4e-97
Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 17/249 (6%)
Query: 38 NPILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGF-EKHYF 96
R++GG + G+ PWL A+Y G C G ++ WV++AAHC +
Sbjct: 28 KRTFLRPRIIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSPPRDSV 86
Query: 97 EVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAP----LRYNRYVR 151
V G + Q + + + ++++ +DL L++L +++V+
Sbjct: 87 SVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQ 146
Query: 152 PICLPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILPA--CK---HYEDRI- 204
PICLP+ T C GWG + E+ +RE VP++ C Y I
Sbjct: 147 PICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADIS 206
Query: 205 ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVS 264
+++CAG D CQGDSGGPL C G Y+ G++S G+GC R ++PGVYTRV+
Sbjct: 207 PNMLCAGYFDCKSDACQGDSGGPLACEK---NGVAYLYGIISWGDGCGRLHKPGVYTRVA 263
Query: 265 QFVPWLMSN 273
+V W+
Sbjct: 264 NYVDWINDR 272
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 282 bits (725), Expect = 1e-96
Identities = 78/235 (33%), Positives = 121/235 (51%), Gaps = 17/235 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG A G +P+++++ R+G CGG +L+ + V+TAAHCV G+ + F++ AG L R
Sbjct: 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSR 60
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
+ +S + +H + NDLA+L+L+ + + L P
Sbjct: 61 ---TSGGITSSLSSVRVHPSYSG--NNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAG 115
Query: 166 STCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKH--YEDRIADV-ICAGMPQGGRDT 219
S+ T GWGA E G P ++ +V VPI+ C+ I + CAG+ GG+D+
Sbjct: 116 SSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDS 175
Query: 220 CQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSNS 274
CQGDSGGP++ + G VS G GCARPN GVY V ++ + +
Sbjct: 176 CQGDSGGPIVD------SSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDTYA 224
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 283 bits (726), Expect = 1e-96
Identities = 86/242 (35%), Positives = 125/242 (51%), Gaps = 18/242 (7%)
Query: 39 PILGSGRVVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYF 96
P GRVVGG A +WPW ++L R G CGG ++ WV+TAAHC++ + +
Sbjct: 11 PKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSY 70
Query: 97 EVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLP 156
+V G + + P Q VSR+ + D+ALL+L++P V P CLP
Sbjct: 71 KVILGAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLP 124
Query: 157 DVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICA 210
+ C GWG + ++E Q+P++ C R+ + +CA
Sbjct: 125 SPNYVVADRTECFITGWGET-QGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCA 183
Query: 211 GMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWL 270
G GG D+CQGD+GGPL+C + ++ + GV S G GCARPN+PGVY RVS+FV W+
Sbjct: 184 GHLAGGTDSCQGDAGGPLVCFE---KDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWI 240
Query: 271 MS 272
Sbjct: 241 EG 242
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 282 bits (725), Expect = 2e-96
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 14/234 (5%)
Query: 42 GSGRVVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYA 100
G R+V G++A G+WPW ++L + GF CGG +++E+WV+TAAHC V A
Sbjct: 12 GLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC---GVTTSDVVVA 68
Query: 101 GMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTE 160
G + S S Q ++++ +S + + ND+ LL+L+ +++ V +CLP ++
Sbjct: 69 GEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASD 128
Query: 161 TPEPYSTCTAVGWGAV-FEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQG 215
+TC GWG + + PD +++ +P+L CK + +I D ICAG
Sbjct: 129 DFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAG--AS 186
Query: 216 GRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
G +C GDSGGPL+C G W + G+VS G + PGVY RV+ V W
Sbjct: 187 GVSSCMGDSGGPLVCKK---NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNW 237
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 282 bits (723), Expect = 5e-96
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 26/250 (10%)
Query: 46 VVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGFEKH---------- 94
+ G+ A+ G PW+ L + +G CGG +L SW++TAAHC+
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDL 60
Query: 95 ----YFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYV 150
F++ G R EQ V +H + ND+AL++L N +V
Sbjct: 61 LSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFV 120
Query: 151 RPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH----YEDRI 204
PICLP+ + + GWG F P+ + E+++PI+ C+ + ++
Sbjct: 121 MPICLPE--GPQQEGAMVIVSGWGKQFL-QRFPETLMEIEIPIVDHSTCQKAYAPLKKKV 177
Query: 205 -ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRV 263
D+ICAG +GG+D C GDSGGP++ +G+WY+ G VS G+ C + + GVY+ +
Sbjct: 178 TRDMICAGEKEGGKDACAGDSGGPMVTLNR-ERGQWYLVGTVSWGDDCGKKDRYGVYSYI 236
Query: 264 SQFVPWLMSN 273
W+
Sbjct: 237 HHNKDWIQRV 246
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 280 bits (718), Expect = 2e-95
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 46 VVGGKKAELGAWPWLIALYR-DGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
++ GK G PW + L CG V++ SWV+TAAHC+D +K V G
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKK--LLVRLGEYD 58
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPD----VTE 160
+ E + + +H + ++ ND+ALL LA P ++ + PICLPD E
Sbjct: 59 LRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERE 118
Query: 161 TPEPYSTCTAVGWGAVFEHGPD-----PDHMREVQVPILP--ACKH-YEDRI-ADVICAG 211
+ GWG + + +++P++P C + + +++CAG
Sbjct: 119 LNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAG 178
Query: 212 MPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLM 271
+ +D C+GDSGGP++ G W++ G+VS GEGC + GVYT+VS+++ W+
Sbjct: 179 ILGDRQDACEGDSGGPMVASF---HGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIH 235
Query: 272 SN 273
+
Sbjct: 236 GH 237
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 279 bits (716), Expect = 4e-95
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 17/241 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFE-KHYFEVYAGMLR 104
++GG + G+ PWL A+Y G C G ++ WV++AAHC + V G
Sbjct: 1 IIGGSSSLPGSHPWLAAIYI-GDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHF 59
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAP----LRYNRYVRPICLPDVT 159
+ Q + + + ++++ +DL L++L +++V+PICLP+
Sbjct: 60 FNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPG 119
Query: 160 ETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP-----ACKHYEDRI-ADVICAGM 212
T C GWG + E+ +RE VP++ + + Y I +++CAG
Sbjct: 120 STFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGY 179
Query: 213 PQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMS 272
D CQGDSGGPL C G Y+ G++S G+GC R ++PGVYTRV+ +V W+
Sbjct: 180 FDCKSDACQGDSGGPLACEK---NGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWIND 236
Query: 273 N 273
Sbjct: 237 R 237
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 278 bits (714), Expect = 3e-94
Identities = 81/248 (32%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 46 VVGGKKAELGAWPWLIALY------RDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEV 98
++GG+ A GAWPW+++L + CGG +L+ W++TAAHC +K + +
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60
Query: 99 YAGMLRR-----FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPI 153
G P Q R V +I++H + + ND+AL+++ P+ ++ P
Sbjct: 61 IFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPG 120
Query: 154 CLPDVTET-PEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK---HYEDRI-A 205
CLP P TC GWG + E+ ++E +V ++ C Y RI +
Sbjct: 121 CLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRS 180
Query: 206 DVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQ 265
+CAG P+G DTCQGDSGGPL+C ++ + V G+ S G GCAR PGVYT
Sbjct: 181 TNVCAGYPEGKIDTCQGDSGGPLMCKDS-AENSYVVVGITSWGVGCARAKRPGVYTSTWS 239
Query: 266 FVPWLMSN 273
++ W+ S
Sbjct: 240 YLNWIASK 247
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 278 bits (712), Expect = 4e-94
Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 22/254 (8%)
Query: 39 PILGSGRVVGGKKAELGAWPWLIALYR-----DGFFHCGGVVLDESWVMTAAHCVDGF-E 92
+ +++GG+ + PW A+YR + CGG ++ WV++A HC + +
Sbjct: 17 TLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPK 76
Query: 93 KHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAP----LRY 146
K + VY G R S + E V +++H + + ND+ALL++ + +
Sbjct: 77 KEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQP 136
Query: 147 NRYVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK---HY 200
+R ++ ICLP + P+ ++C G+G P+ ++ V ++ C+ +Y
Sbjct: 137 SRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYY 196
Query: 201 EDRI-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGV 259
+ ++CA PQ D+CQGDSGGPL+C QGR + G+VS G GCA ++PGV
Sbjct: 197 GSEVTTKMLCAADPQWKTDSCQGDSGGPLVCS---LQGRMTLTGIVSWGRGCALKDKPGV 253
Query: 260 YTRVSQFVPWLMSN 273
YTRVS F+PW+ S+
Sbjct: 254 YTRVSHFLPWIRSH 267
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 275 bits (706), Expect = 6e-94
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 18/228 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG + + + P ++L G+ CGG +++E+WV++AAHC EV G
Sbjct: 1 IVGGYECKAYSQPHQVSLNS-GYHFCGGSLVNENWVVSAAHCYKS----RVEVRLGEHNI 55
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
+EQ SR++ H + + ND+ L++L+ P N YV+P+ LP T
Sbjct: 56 KVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALP--TSCAPAG 113
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGGRDTCQ 221
+ CT GWG D + ++ + +PIL C + Y I + CAG +GG+D+CQ
Sbjct: 114 TMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQ 173
Query: 222 GDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
GDSGGP++C + GVVS G GCA P PGVY +V F W
Sbjct: 174 GDSGGPVVC-------NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDW 214
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 275 bits (706), Expect = 2e-93
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 22/247 (8%)
Query: 46 VVGGKKAELGAWPWLIALYR-----DGFFHCGGVVLDESWVMTAAHCVDGF-EKHYFEVY 99
++GG+ + PW A+YR + CGG ++ WV++A HC + +K + VY
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 100 AGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAP----LRYNRYVRPI 153
G R S + E V +++H + + ND+ALL++ + + +R ++ I
Sbjct: 61 LGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTI 120
Query: 154 CLPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK---HYEDRIADV 207
LP + P+ ++C G+G P+ ++ V ++ C+ +Y +
Sbjct: 121 SLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTK 180
Query: 208 -ICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQF 266
+CA PQ D+CQGDSGGPL+C + QGR + G+VS G GCA ++PGVYTRVS F
Sbjct: 181 MLCAADPQWKTDSCQGDSGGPLVCSL---QGRMTLTGIVSWGRGCALKDKPGVYTRVSHF 237
Query: 267 VPWLMSN 273
+PW+ S+
Sbjct: 238 LPWIRSH 244
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 286 bits (732), Expect = 2e-93
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
R+VGGK+A+LG PW +A+ CGG+ + W++TAAHC+ + H ++++ +
Sbjct: 319 RKRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTV 378
Query: 103 LRRFSFS-PTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYN----RYVRPICLPD 157
+ + V RI+ H + ND+AL+++ P C+P
Sbjct: 379 VDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPW 438
Query: 158 VTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILPACKH-YEDRI--ADVICAGMPQ 214
+P TC GWG ++ ++ +V ++ C Y +R ++ CAG
Sbjct: 439 SPYLFQPNDTCIVSGWGREKDNER-VFSLQWGEVKLISNCSKFYGNRFYEKEMECAGTYD 497
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
G D C+GDSGGPL+C + YV GVVS GE C +P PGVYT+V+ + W+ +
Sbjct: 498 GSIDACKGDSGGPLVC--MDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYH 554
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 274 bits (704), Expect = 3e-93
Identities = 78/246 (31%), Positives = 109/246 (44%), Gaps = 22/246 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFF---HCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
V+GG A G +PW ++ R CG +L + ++A+HCVDG + V AG+
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGL 60
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKR--AEMTNDLALLQLAAPLRYNRYVRPICLPDVTE 160
++ S T Q V MH + A +ND+A+L LA + ++ LP
Sbjct: 61 WQQSDTSGT-QTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNN 119
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK-----HYEDRIADV-ICAGM 212
+TC GWG PD +++ +P++ C I D IC
Sbjct: 120 NDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQD 179
Query: 213 PQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVS----HGEGCARPNEPGVYTRVSQFVP 268
P G C GDSGGPL CP G V GV S G G P+ P VYTRVS ++
Sbjct: 180 PAGNTGACNGDSGGPLNCP----DGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLG 235
Query: 269 WLMSNS 274
W+ NS
Sbjct: 236 WIGDNS 241
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 273 bits (700), Expect = 7e-93
Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 17/230 (7%)
Query: 46 VVGGKKAELGAWPWLIALY-RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
+VGG + G PW L + CGG +L E +++TAAHC+ + F+V G
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLY--QAKRFKVRVGDRN 58
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
E V V ++ H+ F + D+A+L+L P+ + V P LP T P
Sbjct: 59 TEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLP--TAPPAT 116
Query: 165 YSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGGRDT 219
+ C GWG G D PD ++ + P+L C+ Y +I C G +GG+D+
Sbjct: 117 GTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDS 176
Query: 220 CQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
CQGDSGGP++C + GVVS G+GCA+ N+PGVYT+V +V W
Sbjct: 177 CQGDSGGPVVC-------NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKW 219
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 273 bits (701), Expect = 9e-93
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 27/252 (10%)
Query: 46 VVGGKKAELGAWPWLIALYRDGF------FHCGGVVLDESWVMTAAHCVDGFEK-HYFEV 98
+ GG A++ + PW A++ F CGG+++ W+++AAHC H+ V
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60
Query: 99 YAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPL----RYNRYVRPIC 154
G R EQ V + ++H F ND+ALLQL + + + VR +C
Sbjct: 61 ILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVC 120
Query: 155 LPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK---HYEDRI-ADV 207
LP ++ C G+G P + ++E V + P C + ++
Sbjct: 121 LPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNM 180
Query: 208 ICAGMPQGG------RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYT 261
+CAG + G D CQGDSGGPL+C GR + G++S G GC + + PGVYT
Sbjct: 181 LCAGDTRSGGPQANLHDACQGDSGGPLVCLN---DGRMTLVGIISWGLGCGQKDVPGVYT 237
Query: 262 RVSQFVPWLMSN 273
+V+ ++ W+ N
Sbjct: 238 KVTNYLDWIRDN 249
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 272 bits (698), Expect = 1e-92
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 19/229 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG P+ ++L G+ CGG +++ WV++AAHC K +V G
Sbjct: 1 IVGGYTCGANTVPYQVSLNS-GYHFCGGSLINSQWVVSAAHCY----KSGIQVRLGEDNI 55
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
EQ S+ ++H + + ND+ L++L + N V I LP T
Sbjct: 56 NVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLP--TSCASAG 113
Query: 166 STCTAVGWGAVFEHGPD-PDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGRDTC 220
+ C GWG G PD ++ ++ PIL +C Y +I CAG +GG+D+C
Sbjct: 114 TQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSC 173
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
QGDSGGP++C + G+VS G GCA+ N+PGVYT+V +V W
Sbjct: 174 QGDSGGPVVC-------SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSW 215
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 273 bits (700), Expect = 1e-92
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 25/245 (10%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHY-----FEVYA 100
++GG+KA++G +PW + G GG +L + W++TAAH + E +V+
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 101 GMLRRFSFSPTEQVRPVSRIVMHSMFKRAE---MTNDLALLQLAAPLRYNRYVRPICLPD 157
G P+ R+ +H +++ E D+ALL+L + + PICLPD
Sbjct: 59 GHTNVEELMK-LGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPD 117
Query: 158 VTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH------YEDRI-ADVI 208
+ G+G + E +R V++P+ AC++ D ++
Sbjct: 118 NDTFYDLGLMGYVSGFGVMEEKI--AHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMF 175
Query: 209 CAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVP 268
CAG P +D CQGDSGG P + RW G+VS G GC+R G YT+V +V
Sbjct: 176 CAGHPSLKQDACQGDSGGVFAVRDPNT-DRWVATGIVSWGIGCSRG--YGFYTKVLNYVD 232
Query: 269 WLMSN 273
W+
Sbjct: 233 WIKKE 237
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 273 bits (701), Expect = 1e-92
Identities = 71/244 (29%), Positives = 108/244 (44%), Gaps = 19/244 (7%)
Query: 43 SGRVVGGKKAELGAWPWLIAL----YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEV 98
S RVVGG+ A +WPW I+L CGG ++ + V+TAAHC+ + V
Sbjct: 11 SARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISN--TLTYRV 68
Query: 99 YAGMLRRFSFS-PTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPD 157
G V I +H + + ND+AL++LA + ++ CLP
Sbjct: 69 ALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPS 128
Query: 158 VTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAG 211
C GWG ++ +GP +++ P++ C + + ++CAG
Sbjct: 129 EGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAG 188
Query: 212 MPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVS--HGEGCARPNEPGVYTRVSQFVPW 269
G C GDSGGPL C G+W V G+VS G C +P V+TRVS ++ W
Sbjct: 189 -GDGVISACNGDSGGPLNCQA---DGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDW 244
Query: 270 LMSN 273
+
Sbjct: 245 INQK 248
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 272 bits (699), Expect = 2e-92
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 19/236 (8%)
Query: 45 RVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVYAGML 103
++GGK+ + P++ ++ G CGGV++D WV+TAAHC F K V G
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAH 61
Query: 104 RRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPE 163
++Q + + + S +ND+ L++L + N++V+ + + T
Sbjct: 62 SLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLR- 120
Query: 164 PYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK---HYEDRIA---DVICAGMPQ 214
+ C GWGA D +REV V +L C +Y D++CAG +
Sbjct: 121 SGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAK 180
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQ-FVPW 269
G +D+C+GD+GGPL+C + +VS G C +PG+YT +++ + W
Sbjct: 181 GQKDSCKGDAGGPLIC-------KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTW 229
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 272 bits (698), Expect = 2e-92
Identities = 73/244 (29%), Positives = 119/244 (48%), Gaps = 22/244 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDG--FEKHYFEVYAGML 103
+ GG+KA+ G +PW + + G G +L ++WV+TAAH V + ++ G L
Sbjct: 1 IYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTL 58
Query: 104 RRFSFSPTEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRPICLP--DVTE 160
+R SP + +H + ND+AL++L + N + PICLP +
Sbjct: 59 KR--LSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAES 116
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-------YEDRI-ADVICA 210
TA GWG + G ++ V +PI+ C + A+++CA
Sbjct: 117 FMRTDDIGTASGWGLT-QRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCA 175
Query: 211 GMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFVPW 269
G+ GG+D+C+GDSGG L+ + RW+V G+VS G C + GVYT+V ++PW
Sbjct: 176 GLESGGKDSCRGDSGGALVFLDSET-ERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPW 234
Query: 270 LMSN 273
+ +
Sbjct: 235 IENI 238
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 275 bits (705), Expect = 3e-92
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 25/253 (9%)
Query: 38 NPILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHY-- 95
NP+ R++GG+KA++G +PW + G GG +L + W++TAAH + E
Sbjct: 82 NPVEQRQRIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTLYPKEHEAQS 139
Query: 96 ---FEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT---NDLALLQLAAPLRYNRY 149
+V+ G P+ R+ +H +++ E D+ALL+L +
Sbjct: 140 NASLDVFLGHTNVEELMK-LGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPN 198
Query: 150 VRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH------YE 201
+ PICLPD + G+G + +R V++P+ AC++
Sbjct: 199 LLPICLPDNDTFYDLGLMGYVSGFGVM--EEKIAHDLRFVRLPVANPQACENWLRGKNRM 256
Query: 202 DRI-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVY 260
D ++ CAG P +D CQGDSGG P + RW G+VS G GC+R G Y
Sbjct: 257 DVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNT-DRWVATGIVSWGIGCSRG--YGFY 313
Query: 261 TRVSQFVPWLMSN 273
T+V +V W+
Sbjct: 314 TKVLNYVDWIKKE 326
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 270 bits (693), Expect = 1e-91
Identities = 82/241 (34%), Positives = 129/241 (53%), Gaps = 19/241 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDG---FFH-CGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
VVGG+ A +WPW ++L D + H CGG ++D+SWV+TAAHC+ + V G
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS--SRTYRVVLG 58
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAPLRYNRYVRPICLPDVT 159
+ P VS++V+H + +++ ND+ALL+LA+P+ ++ CLP
Sbjct: 59 RHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAG 118
Query: 160 ETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAGMP 213
C GWG + +G PD +++ Q+ ++ C + + ++ICAG
Sbjct: 119 TILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAG-G 177
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE--GCARPNEPGVYTRVSQFVPWLM 271
G +C GDSGGPL C G+ G+W V G+VS G GC ++P V+TRVS ++ W+
Sbjct: 178 DGIISSCNGDSGGPLNC--QGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWIN 235
Query: 272 S 272
S
Sbjct: 236 S 236
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 269 bits (691), Expect = 1e-91
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKH-YFEVYAGMLR 104
VVGG +A G +P+++ L CGG + + V+TAAHCV G + G++
Sbjct: 1 VVGGTRAAQGEFPFMVRLS----MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVD 56
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
S + ++++ F + D AL++LA P+ +P T
Sbjct: 57 LQS--SSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QPTLKIATTTAY-N 108
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK--HYEDRIAD-VICAGMPQGGRDT 219
T T GWGA E G ++ + VP + AC+ +A+ +ICAG DT
Sbjct: 109 QGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDT 168
Query: 220 CQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
CQGDSGGP+ W G+VS GEGCAR + GVYT VS F + S
Sbjct: 169 CQGDSGGPMFRKDNA--DEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASA 220
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 269 bits (691), Expect = 2e-91
Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 16/231 (6%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GG++AE A P++ ++ +G CGGV++ E WV++AAHC++ +V G
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSL 60
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
P++++ V R V H + + +DL LLQL+ VRP+ V P
Sbjct: 61 SQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPG 120
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRIADV-ICAGMPQGGRDT 219
+ C GWG V G PD ++ V +P+L C H++ I + +CA RD+
Sbjct: 121 TLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAE--SNRRDS 178
Query: 220 CQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPW 269
C+GD+GGPL+C + GVV+ G C +PG+YTRV+ + W
Sbjct: 179 CKGDAGGPLVC-------GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAW 222
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 267 bits (686), Expect = 7e-91
Identities = 72/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+V G + + P+ ALY G CGGV++ WV+TAAHC K +V+ G
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK----KPNLQVFLGKHNL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
+++ V R V+H + A D+ LL+LA P + + ++P+ L +
Sbjct: 57 RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLE--RDCSANT 114
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGGRDTCQ 221
++C +GWG G PD ++ + ++ C+H Y +I +CAG + G+D+CQ
Sbjct: 115 TSCHILGWGKT-ADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQ 173
Query: 222 GDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFVPW 269
GDSGGPL+C ++ G+VS G C +PGVYT V ++ W
Sbjct: 174 GDSGGPLVC-------GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNW 215
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 274 bits (702), Expect = 7e-91
Identities = 73/253 (28%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 38 NPILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHY-- 95
NP+ +++GG+KA++G +PW + G GG +L + W++TAAH + E
Sbjct: 150 NPVEQRQQIIGGQKAKMGNFPWQVFTNIHGR--GGGALLGDRWILTAAHTLYPKEHEAQS 207
Query: 96 ---FEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT---NDLALLQLAAPLRYNRY 149
+V+ G P+ R+ +H +++ E D+ALL+L +
Sbjct: 208 NASLDVFLGHTNV-EELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPN 266
Query: 150 VRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK------HYE 201
+ PICLPD + G+G + E +R V++P+ AC+ +
Sbjct: 267 LLPICLPDNDTFYDLGLMGYVSGFGVMEEKI--AHDLRFVRLPVANPQACENWLRGKNRM 324
Query: 202 DRI-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVY 260
D ++ CAG P +D CQGDSGG P + RW G+VS G GC+R G Y
Sbjct: 325 DVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNT-DRWVATGIVSWGIGCSRG--YGFY 381
Query: 261 TRVSQFVPWLMSN 273
T+V +V W+
Sbjct: 382 TKVLNYVDWIKKE 394
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 268 bits (687), Expect = 1e-90
Identities = 82/238 (34%), Positives = 119/238 (50%), Gaps = 20/238 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDG---FFH-CGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
VVGG +A+ +WP I+L + H CGG ++ ++WVMTAAHCVD + F V G
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR--ELTFRVVVG 58
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAPLRYNRYVRPICLPDVT 159
+ TEQ V +IV+H + ++ D+ALL+LA + N YV+ LP
Sbjct: 59 EHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAG 118
Query: 160 ETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAGMP 213
S C GWG +G +++ +P + C ++ + ++CAG
Sbjct: 119 TILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG-G 177
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE--GCARPNEPGVYTRVSQFVPW 269
G R CQGDSGGPL C V G++ V GV S GC +P V+TRVS ++ W
Sbjct: 178 DGVRSGCQGDSGGPLHCLV---NGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISW 232
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 267 bits (686), Expect = 1e-90
Identities = 78/238 (32%), Positives = 115/238 (48%), Gaps = 21/238 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDG---FFH-CGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
VVGG+ A+ +WPW I+L ++H CGG ++ + WVMTAAHCVD + V G
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS--ARTWRVVLG 58
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT--NDLALLQLAAPLRYNRYVRPICLPDVT 159
+ EQ+ V+ + +HS + ++ D+ALL+L N V+ LP
Sbjct: 59 EHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSN 118
Query: 160 ETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAGMP 213
+ + C GWG GP D +++ +P + C + + ++CAG
Sbjct: 119 QILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAG-- 176
Query: 214 QGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVS--HGEGCARPNEPGVYTRVSQFVPW 269
G C GDSGGPL C V G +YV GV S GC +P V+TRVS ++ W
Sbjct: 177 GGANSGCNGDSGGPLNCQV---NGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISW 231
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 269 bits (689), Expect = 2e-90
Identities = 79/260 (30%), Positives = 121/260 (46%), Gaps = 27/260 (10%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDG--FFHCGGVVLDESWVMTAAHCV------DGFEKH 94
GR+V G AE+G PW + L+R CG ++ + WV+TAAHC+ F ++
Sbjct: 28 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 87
Query: 95 YFEVYAGMLRRFSFSP-TEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRP 152
V G R + E++ + +I +H + E + D+AL++L P+ ++ Y+ P
Sbjct: 88 DLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 147
Query: 153 ICLPDVTETPEPY---STCTAVGWGAVFEH------GPDPDHMREVQVPILP--ACKH-Y 200
+CLPD GWG + E P ++ V +PI+ CK
Sbjct: 148 VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDST 207
Query: 201 EDRI-ADVICAGMPQ---GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNE 256
RI ++ CAG D C+GDSGGP + P RWY G+VS GEGC R +
Sbjct: 208 RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSP-FNNRWYQMGIVSWGEGCDRDGK 266
Query: 257 PGVYTRVSQFVPWLMSNSER 276
G YT V + W+ ++
Sbjct: 267 YGFYTHVFRLKKWIQKVIDQ 286
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 273 bits (699), Expect = 2e-90
Identities = 74/251 (29%), Positives = 121/251 (48%), Gaps = 22/251 (8%)
Query: 39 PILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDG--FEKHYF 96
G++ GG+KA+ G +PW + + G G +L ++WV+TAAH V +
Sbjct: 155 ARTTGGQIYGGQKAKPGDFPWQVLIL--GGTTAAGALLYDNWVLTAAHAVYEQKHDASAL 212
Query: 97 EVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRPICL 155
++ G L+R S P + +H + ND+AL++L + N + PICL
Sbjct: 213 DIRMGTLKRLS--PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICL 270
Query: 156 P--DVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-------YEDRI 204
P + TA GWG + G ++ V +PI+ C +
Sbjct: 271 PRKEAESFMRTDDIGTASGWGLT-QRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSV 329
Query: 205 -ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTR 262
A+++CAG+ GG+D+C+GDSGG L+ + RW+V G+VS G C + GVYT+
Sbjct: 330 TANMLCAGLESGGKDSCRGDSGGALVFLDSET-ERWFVGGIVSWGSMNCGEAGQYGVYTK 388
Query: 263 VSQFVPWLMSN 273
V ++PW+ +
Sbjct: 389 VINYIPWIENI 399
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 267 bits (684), Expect = 3e-90
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 19/232 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM--L 103
VV G W+++L CGG ++ ESWV+TA C + +E + G+ +
Sbjct: 1 VVNGIPTR-TNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDV 59
Query: 104 RRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPE 163
+QV VS++V +DL L++LA P + +V I LP+ T
Sbjct: 60 HGRGDEKCKQVLNVSQLVYGPEG------SDLVLMKLARPAVLDDFVSTIDLPNYGSTIP 113
Query: 164 PYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRI-ADVICAGMPQGGR 217
++C+ GWG +R + I+ C + + ICAG + G
Sbjct: 114 EKTSCSVYGWGYT-GLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGS 172
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
C+GD GGPL+C V GV+ G GCA PN PG++ RV+ + W
Sbjct: 173 GPCEGDYGGPLVCEQ---HKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKW 221
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 272 bits (696), Expect = 5e-90
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 28/262 (10%)
Query: 38 NPILGSGRVVGGK-KAELGAWPWLIALYRDGF--------FHCGGVVLDESWVMTAAHCV 88
N ++ G +AE G +PW++A+ + CGG ++ S V+T AHCV
Sbjct: 122 NERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCV 181
Query: 89 DGFEK--HYFEVYAGM--LRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPL 144
+ ++ ++ AG Q R + ++++HS F + ND+ALL L PL
Sbjct: 182 NSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPL 241
Query: 145 RYNRYVRPICLPDVTETPEPYSTCTAVGWGAVFEH--GPDPDHMREVQVPILP--ACKH- 199
+ ICLP ++ + C A GWG + ++++Q+P + C+
Sbjct: 242 VQADNIGTICLPQQSQIF-DSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQAD 300
Query: 200 -------YEDRIAD-VICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGC 251
+ + +CAG + G+DTC GD G PL CP P + R+ G+V+ G GC
Sbjct: 301 LRNTRLGLKFVLDQTFVCAG-GEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGC 359
Query: 252 ARPNEPGVYTRVSQFVPWLMSN 273
N PGVY V+ F W+
Sbjct: 360 GDENVPGVYANVAHFRNWIDQE 381
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 267 bits (684), Expect = 5e-90
Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 27/254 (10%)
Query: 46 VVGGKKAELGAWPWLIALYRDG--FFHCGGVVLDESWVMTAAHCV------DGFEKHYFE 97
+V G AE+G PW + L+R CG ++ + WV+TAAHC+ F ++
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 98 VYAGMLRRFSFSP-TEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRPICL 155
V G R + E++ + +I +H + E + D+AL++L P+ ++ Y+ P+CL
Sbjct: 61 VRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL 120
Query: 156 PDVTETPEPY---STCTAVGWGAVFEH------GPDPDHMREVQVPILP--ACKH-YEDR 203
PD GWG + E P ++ V +PI+ CK R
Sbjct: 121 PDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIR 180
Query: 204 I-ADVICAGMPQ---GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGV 259
I ++ CAG D C+GDSGGP + P RWY G+VS GEGC R + G
Sbjct: 181 ITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSP-FNNRWYQMGIVSWGEGCDRDGKYGF 239
Query: 260 YTRVSQFVPWLMSN 273
YT V + W+
Sbjct: 240 YTHVFRLKKWIQKV 253
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 267 bits (685), Expect = 6e-90
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 43 SGRVVGGKKAELGAWPWLIAL-YRDGF----FHCGGVVLDESWVMTAAHCVDGFEKHY-- 95
+ +++ G +PW + Y++ F CGG +++ +++TAAHCV G
Sbjct: 20 ADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVG 79
Query: 96 --FEVYAG-----------MLRRFSFSPTEQVRPVSRIVMHSMFKRA--EMTNDLALLQL 140
+V G R + + H + + +D+AL++L
Sbjct: 80 ALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRL 139
Query: 141 AAPLRYNRYVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK 198
+ + Y+RP+CLP E + T VGWG E G +++ VP++ C
Sbjct: 140 NRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT-ETGQYSTIKQKLAVPVVHAEQCA 198
Query: 199 H----YEDRIAD-VICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCAR 253
R+ +CAG + +D+C GDSGGPLL ++++ G+VS G C
Sbjct: 199 KTFGAAGVRVRSSQLCAG-GEKAKDSCGGDSGGPLLAERAN--QQFFLEGLVSFGATCGT 255
Query: 254 PNEPGVYTRVSQFVPWLMSN 273
PG+YT+V ++ W+ N
Sbjct: 256 EGWPGIYTKVGKYRDWIEGN 275
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 265 bits (680), Expect = 1e-89
Identities = 92/244 (37%), Positives = 126/244 (51%), Gaps = 28/244 (11%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFF---HCGGVVLDESWVMTAAHCVDGFEKH--YFEVYA 100
+VGG++A WPW ++L + CGG ++ WV+TAAHCV K V
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQL 60
Query: 101 GMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTE 160
+Q+ PVSRI++H F + D+ALL+L P+ + V + LP +E
Sbjct: 61 REQHL---YYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASE 117
Query: 161 TPEPYSTCTAVGWGAVFEHG--PDPDHMREVQVPILP--ACKHYEDRIA----------- 205
T P C GWG V P P +++V+VPI+ C A
Sbjct: 118 TFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRD 177
Query: 206 DVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQ 265
D++CAG RD+CQGDSGGPL+C V G W AGVVS GEGCA+PN PG+YTRV+
Sbjct: 178 DMLCAG--NSQRDSCQGDSGGPLVCKV---NGTWLQAGVVSWGEGCAQPNRPGIYTRVTY 232
Query: 266 FVPW 269
++ W
Sbjct: 233 YLDW 236
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 264 bits (677), Expect = 2e-89
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++ G G+ PW +AL HCGGV+++E WV+TAAHC + + V+ G
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCK----MNEYTVHLGSDTL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
Q S+ H + NDL L++L + R + V+ + LP + P
Sbjct: 57 --GDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLP--SRCEPPG 112
Query: 166 STCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGGRDTC 220
+TCT GWG P + V V ++ C Y+D + + +CAG+P ++ C
Sbjct: 113 TTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNAC 172
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFVPW 269
GDSGGPL+C R + G+VS G C +PN+PGVYT+V +F W
Sbjct: 173 NGDSGGPLVC-------RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKW 215
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 264 bits (678), Expect = 2e-89
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GG++ + P++ +L R+G CGGV++ WV+TAAHC+ + G+
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQL-RLVLGLHTL 59
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ + H +K + NDLALLQL ++ +R +RP+ LP +
Sbjct: 60 ---DSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAA 116
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRIADV-ICAGMPQGGRD 218
+ C+ GWG + G +RE+ + +L C + ++ +C +
Sbjct: 117 GTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQA 176
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPW 269
C+GDSGGPL+C +AGV+S C +P V T V+ +V W
Sbjct: 177 PCKGDSGGPLVC-----GKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSW 223
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 264 bits (676), Expect = 4e-89
Identities = 86/244 (35%), Positives = 124/244 (50%), Gaps = 30/244 (12%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
+ V + + PW +A+YR + CGGV+LD +WV+TAAHC ++V+ G
Sbjct: 1 AAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY----NDKYQVWLGK 56
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKRAEMT-----------NDLALLQLAAPLRYNRYVR 151
P++Q R VS+ + H F + + NDL LL+L+ P V+
Sbjct: 57 NNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVK 116
Query: 152 PICLPDVTETPEPYSTCTAVGWGAVFE-HGPDPDHMREVQVPILP--AC-KHYEDRIADV 207
PI LP TE P+ STC A GWG+ PD ++ V + +LP C K +E ++ D
Sbjct: 117 PITLP--TEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDA 174
Query: 208 -ICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQ 265
+CAG GG TC+ DSGGPL+C + G+ S G E C P EP VYT++ +
Sbjct: 175 MLCAGEMDGGSYTCEHDSGGPLIC-------DGILQGITSWGPEPCGEPTEPSVYTKLIK 227
Query: 266 FVPW 269
F W
Sbjct: 228 FSSW 231
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 264 bits (676), Expect = 4e-89
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 34/250 (13%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
VVGG E + PW +A+Y CGGV+LD +WV+TAAHC +EV+ G +
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY----VDQYEVWLGKNKL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT-----------NDLALLQLAAPLRYNRYVRPIC 154
F P+ Q R VS+ H F + + +DL LL+L+ P V+PI
Sbjct: 57 FQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIA 116
Query: 155 LPDVTETPEPYSTCTAVGWGAVFEHG-PDPDHMREVQVPILP--ACKH-YEDRIADV-IC 209
LP T+ P+P S C A GWG++ PD ++ V + +LP C Y ++ DV +C
Sbjct: 117 LP--TKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLC 174
Query: 210 AGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFVP 268
AG GG+DTC+ DSGGPL+C + G S+G C +P P +YT + +F
Sbjct: 175 AGEMGGGKDTCRDDSGGPLIC-------DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNS 227
Query: 269 W----LMSNS 274
W +M N+
Sbjct: 228 WIKDTMMKNA 237
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 263 bits (675), Expect = 5e-89
Identities = 72/243 (29%), Positives = 109/243 (44%), Gaps = 24/243 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GG + + P+++ L D C G ++ + WV+TAAHC +V G
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHC---NLNKRSQVILGAHSI 57
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
PT+Q+ V + + + A DL LLQL + N+YV + LP + +P
Sbjct: 58 TREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPG 117
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-----YEDRIADV-ICAGMPQGGR 217
+ C GWG D +REV++ I+ C + I +CAG +GGR
Sbjct: 118 TMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGR 177
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHG--EGCARPNEPGVYTRVSQ-FVPWL---M 271
D+C GDSG PLLC GV S G C P PGVY +S+ + W+ +
Sbjct: 178 DSCNGDSGSPLLC-------EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230
Query: 272 SNS 274
+
Sbjct: 231 KGA 233
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 262 bits (672), Expect = 8e-89
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 16/226 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG++A AWP++++L G CG ++ ++VM+AAHCV V G
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNL 60
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
PT QV V RI + + + ND+ +LQL N V+ LP
Sbjct: 61 SRREPTRQVFAVQRIF-ENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNG 119
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILPA-CKHYEDRIADVICAGMPQGGRDTCQGDS 224
C A+GWG + + ++E+ V ++ + C+ +C + C GDS
Sbjct: 120 VQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSN------VCTLVRGRQAGVCFGDS 173
Query: 225 GGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVPW 269
G PL+C + G+ S GCA P + V+QFV W
Sbjct: 174 GSPLVC-------NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNW 212
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 260 bits (666), Expect = 7e-88
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGML-R 104
++ G+ + PW AL + C GV++ WV++AAHC ++ + + G+
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCF----QNSYTIGLGLHSL 56
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
P Q+ S V H + R + NDL L++L + + +R I + ++ P
Sbjct: 57 EADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIA--SQCPTA 114
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGRDTC 220
++C GWG + +G P ++ V V ++ C K Y+ CAG Q +D+C
Sbjct: 115 GNSCLVSGWGLL-ANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSC 173
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPW 269
GDSGGPL+C Y+ G+VS G+ C + PGVYT + +F W
Sbjct: 174 NGDSGGPLIC-------NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEW 216
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 260 bits (666), Expect = 9e-88
Identities = 60/226 (26%), Positives = 84/226 (37%), Gaps = 16/226 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG+KA +P+L ++ G CGG ++ +VMTAA C V G
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDL 60
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
+ + + + + NDL LLQL V + LP T E
Sbjct: 61 RRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAG 120
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIADVICAGMPQGGRDTCQGD 223
+ C GWG+ G R V V + P C+ +C G+ C GD
Sbjct: 121 TRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNN------VCTGVLTRRGGICNGD 174
Query: 224 SGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
G PL+C GV S G P +TRV+ F W
Sbjct: 175 GGTPLVC-------EGLAHGVASFSLGPC-GRGPDFFTRVALFRDW 212
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 260 bits (666), Expect = 1e-87
Identities = 68/233 (29%), Positives = 99/233 (42%), Gaps = 22/233 (9%)
Query: 46 VVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGF--EKHYFEVYAGM 102
VVGG G PW ++L R G CGG ++ E W++TA C +EV+ G
Sbjct: 1 VVGGHP---GNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGT 57
Query: 103 LRR--FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTE 160
L + P+ Q PV+++V + L LL+L + N+ V ICLP
Sbjct: 58 LFQNPQHGEPSLQRVPVAKMVCGPSG------SQLVLLKLERSVTLNQRVALICLPPEWY 111
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGG 216
P + C GWG G + + ++ C + R+ + +C
Sbjct: 112 VVPPGTKCEIAGWGETKGTGN-DTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAP 170
Query: 217 RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
C+GD GGPL C W + G++ CAR P V+TRVS FV W
Sbjct: 171 VGACEGDYGGPLACFT---HNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDW 220
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 260 bits (666), Expect = 1e-87
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
V+GG + + L+A + F C G +++E WV+TAAHC F++ G+ +
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCD----NTNFQMKLGVHSK 56
Query: 106 FSFSPTEQVRPVSR-IVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ EQ R + + + D+ L++L + + + ++ P+ LP + P
Sbjct: 57 KVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLP--SSPPSV 114
Query: 165 YSTCTAVGWGAVFEHG-PDPDHMREVQVPILP--AC-KHYEDRIADV--ICAGMPQGGRD 218
S C +GWG++ PD + +L C Y + + + +CAG+ +GG+D
Sbjct: 115 GSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKD 174
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVPW 269
TC GDSGGPL+C G+VS G C + +PGVYT+V + W
Sbjct: 175 TCGGDSGGPLIC-------NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHW 219
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 258 bits (662), Expect = 4e-87
Identities = 80/232 (34%), Positives = 120/232 (51%), Gaps = 17/232 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVYAGMLR 104
+VGGK A +G +P+ ++L G CG +LD + V+TAAHCVDG + +V+ G
Sbjct: 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNY 60
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
S + V V V++ + + ND+AL+ L P+++N V+PI L E
Sbjct: 61 L---SESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDL-E 116
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIAD-VICAGMPQGGRDTCQ 221
+ CT GWG+ G P+ ++E+++ + P C+ + R+ D IC + G C
Sbjct: 117 SNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWRVIDSHICTL-TKRGEGACH 175
Query: 222 GDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
GDSGGPL+ G+VS G CA P VYTRVS FV W+ +N
Sbjct: 176 GDSGGPLVA-------NGAQIGIVSFGSPCALGE-PDVYTRVSSFVSWINAN 219
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 258 bits (662), Expect = 4e-87
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 46 VVGGKKAELGAWPWLIALY---RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
++GG +A+ + P++ L + CGG ++ + +V+TAAHC V G
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS----SINVTLGA 56
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
PT+Q PV R + H + +ND+ LLQL + R V+P+ LP
Sbjct: 57 HNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQV 116
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK-HYEDRI--ADVICAGMPQGGR 217
+P TC+ GWG G ++EV++ + C+ +C G P+ +
Sbjct: 117 KPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKK 176
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
+ +GDSGGPL+C G+VS+G P P T+VS FV W
Sbjct: 177 TSFKGDSGGPLVC-------NKVAQGIVSYGRNNGMP--PRACTKVSSFVHW 219
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 258 bits (662), Expect = 5e-87
Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 30/241 (12%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG + E + PW + + G CGGV++ WV+TAAHC+ + G
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRN----KSVILLGRHSL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTN-----------DLALLQLAAPLRYNRYVRPIC 154
F T QV VS H ++ + + N DL LL+L+ P V+ +
Sbjct: 57 FHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMD 116
Query: 155 LPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKH-YEDRIADV-IC 209
LP T+ P +TC A GWG++ P ++ V + ++ C + ++ +C
Sbjct: 117 LP--TQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLC 174
Query: 210 AGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVP 268
AG GG+ TC GDSGGPL+C + G+ S G E CA P P +YT+V +
Sbjct: 175 AGRWTGGKSTCSGDSGGPLVC-------NGVLQGITSWGSEPCALPERPSLYTKVVHYRK 227
Query: 269 W 269
W
Sbjct: 228 W 228
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 257 bits (659), Expect = 1e-86
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 46 VVGGKKAELGAWPWLIALY---RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
+VGG +A+ + P++ +L G CGG ++ S+V+TAAHC+ + V G
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGA 60
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
+ PT+Q V+++ +++ + ND+ L+QL++P + V + LP +
Sbjct: 61 HNVRTQEPTQQHFSVAQVFLNN-YDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPV 119
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP-ACKHYEDRIADVICAGMPQGGRDTCQ 221
+ C A+GWG V H P ++E+ V ++ C+ + IC +P+ C
Sbjct: 120 PHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFFCRPHN------ICTFVPRRKAGICF 173
Query: 222 GDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVPW 269
GDSGGPL+C + G+ S GCA P +TRV+ +V W
Sbjct: 174 GDSGGPLIC-------DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDW 215
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 257 bits (659), Expect = 1e-86
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 46 VVGGKKAELGAWPWLIALY----RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
++GG ++ + P++ L + CGG ++ +V+TAAHC V G
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGR----EITVILG 56
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
T+Q V + ++H + +D+ LL+L + V + LP ++
Sbjct: 57 AHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDF 116
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIADV-ICAGMPQGGRD 218
P + C A GWG P +REV++ I+ AC Y +C G P R
Sbjct: 117 IHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYEYKFQVCVGSPTTLRA 176
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
GDSGGPLLC G+VS+G A+P P ++TRVS +VPW
Sbjct: 177 AFMGDSGGPLLC-------AGVAHGIVSYGHPDAKP--PAIFTRVSTYVPW 218
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 257 bits (658), Expect = 2e-86
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 46 VVGGKKAELGAWPWLIALY--RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGML 103
++GG + + +L+ALY R CGG ++++ WV+TAAHC + F + GM
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCD----RKNFRIKLGMH 56
Query: 104 RRFSFSPTEQVR-PVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
+ + EQ R P + S D+ L++L +P++ ++++ P LP + P
Sbjct: 57 SKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLP--SSPP 114
Query: 163 EPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKH----YEDRIADV-ICAGMPQ 214
S C +GWG + PD V + +L C+ +E +CAG+ +
Sbjct: 115 SVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILE 174
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPW 269
GG+DTC+GDSGGPL+C G+ S G+ CA+P++P YT+V + W
Sbjct: 175 GGKDTCKGDSGGPLIC-------NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDW 223
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 262 bits (671), Expect = 6e-86
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 27/260 (10%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDGF--FHCGGVVLDESWVMTAAHCV------DGFEKH 94
GR+V G AE+G PW + L+R CG ++ + WV+TAAHC+ F ++
Sbjct: 163 DGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEN 222
Query: 95 YFEVYAGMLRRFSFSP-TEQVRPVSRIVMHSMFKRAE-MTNDLALLQLAAPLRYNRYVRP 152
V G R + E++ + +I +H + E + D+AL++L P+ ++ Y+ P
Sbjct: 223 DLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 282
Query: 153 ICLPDVTETPEPY---STCTAVGWGAVFEH------GPDPDHMREVQVPILP--ACKH-Y 200
+CLPD GWG + E P ++ V +PI+ CK
Sbjct: 283 VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDST 342
Query: 201 EDRIAD-VICAGMPQ---GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNE 256
RI D + CAG D C+GDSGGP + P RWY G+VS GEGC R +
Sbjct: 343 RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSP-FNNRWYQMGIVSWGEGCDRDGK 401
Query: 257 PGVYTRVSQFVPWLMSNSER 276
G YT V + W+ ++
Sbjct: 402 YGFYTHVFRLKKWIQKVIDQ 421
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 255 bits (655), Expect = 6e-86
Identities = 86/242 (35%), Positives = 120/242 (49%), Gaps = 31/242 (12%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG + E + PW ALY F CGG+++ WV+TAAHC+ ++++ G
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISDN----YQLWLGRHNL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT-----------NDLALLQLAAPL-RYNRYVRPI 153
F T Q VS H F + + +DL LL+L P V+ +
Sbjct: 57 FDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVV 116
Query: 154 CLPDVTETPEPYSTCTAVGWGAV-FEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-I 208
LP TE PE STC A GWG++ E+ PD ++ V + ILP CK + ++ D +
Sbjct: 117 ELP--TEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFML 174
Query: 209 CAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFV 267
C G +GG+DTC GDSGGPL+C + GV S G C PN+P V RV +V
Sbjct: 175 CVGHLEGGKDTCVGDSGGPLMC-------DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYV 227
Query: 268 PW 269
W
Sbjct: 228 KW 229
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 255 bits (655), Expect = 7e-86
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 23/233 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDG--FFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGML 103
VVGG + + P+L+ALY HC G +++ WV+TAAHC + + GM
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCD----RRNIRIKLGMH 56
Query: 104 RRFSFSPTEQVR-PVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
+ + EQ+R P + + + D+ L++L P+ Y+ ++ P+ LP + +
Sbjct: 57 SKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLP--SRSR 114
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK--HYEDRIADV-ICAGMPQGGR 217
S C +GWG + PD + I+ C+ + +CAG+ +GGR
Sbjct: 115 GVGSRCRIMGWGKI-STTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGR 173
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVPW 269
DTC GDSGGPL+C + G+V+ G E C + +P VYT+V + W
Sbjct: 174 DTCHGDSGGPLIC-------NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNW 219
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 258 bits (661), Expect = 2e-85
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 31/258 (12%)
Query: 38 NPILGSGRVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFE 97
P R++GG A++ +PW + GG +++E WV+TAAH V+G +
Sbjct: 75 EPFEEKQRIIGGSDADIKNFPWQVFFDN---PWAGGALINEYWVLTAAHVVEGNREPTMY 131
Query: 98 VYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT-------NDLALLQLAAPLRYNRYV 150
V + ++ S ++ + +H +K + ND+AL++L P++ V
Sbjct: 132 VGSTSVQT-SRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVKMGPTV 190
Query: 151 RPICLPDVTETPEPYS--TCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIAD 206
PICLP + GWG E ++ ++P+ P CK +
Sbjct: 191 SPICLPGTSSDYNLMDGDLGLISGWGRT-EKRDRAVRLKAARLPVAPLRKCKEVKVEKPT 249
Query: 207 V-----------ICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPN 255
ICAG + G D+C+GDSGG P + ++Y AG+VS G C
Sbjct: 250 ADAEAYVFTPNMICAGG-EKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-- 306
Query: 256 EPGVYTRVSQFVPWLMSN 273
G+YTRV +V W+M
Sbjct: 307 -YGLYTRVKNYVDWIMKT 323
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 254 bits (652), Expect = 2e-85
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 22/237 (9%)
Query: 49 GKKAELGAWPWLIALYRDG---FFH-CGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
G+ A +W W ++L + F H CGG ++ WV+TA HC+ ++V G
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYD 59
Query: 105 RFSFSPTEQV--RPVSRIVMHSMFKRAEMT--NDLALLQLAAPLRYNRYVRPICLPDVTE 160
R +EQV + +H ++ + ND+AL++L+ + V+ LP +
Sbjct: 60 RSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGD 119
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRIADV-ICAGMPQ 214
+ C GWG ++ GP PD +++ +P + C + + +CAG
Sbjct: 120 ILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAG--G 177
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVS--HGEGCARPNEPGVYTRVSQFVPW 269
R C GDSGGPL C P + G W V GV S GC +P V+TRVS F+ W
Sbjct: 178 DTRSGCNGDSGGPLNC--PAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDW 232
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 253 bits (650), Expect = 3e-85
Identities = 69/230 (30%), Positives = 111/230 (48%), Gaps = 20/230 (8%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
V+GG + + +L +Y +G CGG ++++ WV+TA HC G +Y GM
Sbjct: 1 VIGGDECNINEHRFLALVYANGSL-CGGTLINQEWVLTARHCDRG----NMRIYLGMHNL 55
Query: 106 FSFSPTEQVR-PVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ R P + + D+ L++L P+R + ++ P+ LP + P
Sbjct: 56 KVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLP--SNPPSV 113
Query: 165 YSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKHYEDRI-ADVICAGMPQGGRDTC 220
S C +GWG + PD + IL C+ + A +CAG+ +GG+DTC
Sbjct: 114 GSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTC 173
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVPW 269
+GDSGGPL+C G++S G CA+P +PG+YT+V + W
Sbjct: 174 KGDSGGPLIC-------NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDW 216
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 254 bits (650), Expect = 3e-85
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 30/241 (12%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GG + E + PW +A+Y G F CGGV++ WV+TAAHC+ ++++ G
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMSD----DYQIWLGRHNL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT-----------NDLALLQLAAPLRYNRYVRPIC 154
T Q VS + F + + +DL LL+LA P R V+ +
Sbjct: 57 SKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILD 116
Query: 155 LPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--AC-KHYEDRIADV-IC 209
LP T+ P+ STC GWG + ++ V++ + C + Y +++ + +C
Sbjct: 117 LP--TQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLC 174
Query: 210 AGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHG-EGCARPNEPGVYTRVSQFVP 268
A C GDSGG L+C G+ S G CA N+ V+T+V
Sbjct: 175 ATHRDDSGSICLGDSGGALIC-------DGVFQGITSWGYSECADFNDNFVFTKVMPHKK 227
Query: 269 W 269
W
Sbjct: 228 W 228
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 253 bits (649), Expect = 3e-85
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 20/231 (8%)
Query: 46 VVGGKKAELGAWPWLIAL----YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
++GG + + + P++ L CGG ++ ++V+TAAHC V G
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA----GRSITVTLG 56
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
T Q V + H + + + +D+ LL+L V + P
Sbjct: 57 AHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNF 116
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKHYEDRIADV-ICAGMPQGGRD 218
P C GWG P D ++EV++ ++ AC H+ D ++ +C G P+ +
Sbjct: 117 VPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKS 176
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
+GDSGGPLLC G+VS+G A+P P V+TR+S + PW
Sbjct: 177 AFKGDSGGPLLC-------AGVAQGIVSYGRSDAKP--PAVFTRISHYRPW 218
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 253 bits (648), Expect = 5e-85
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 20/231 (8%)
Query: 46 VVGGKKAELGAWPWLIALY---RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
++GG +A+ + P++ L CGG ++ E +V+TAAHC+ V G
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS----SINVTLGA 56
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
T+QV PV R + H + + ND+ LL+L V PI LP
Sbjct: 57 HNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEV 116
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK-HYEDRIADV-ICAGMPQGGRD 218
+P C+ GWG + + P D ++EV + + C +++ I ICAG P ++
Sbjct: 117 KPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKN 176
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
+ GDSGGPL+C G+VS+G P VYTR+S F+ W
Sbjct: 177 SFSGDSGGPLVC-------NGVAQGIVSYGRNDGTT--PDVYTRISSFLSW 218
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 253 bits (649), Expect = 5e-85
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GGKK+++ PW + + D CGG +L ++V+TAA CVDG + ++ G R
Sbjct: 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYR 60
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYN-RYVRPICLPDVTETPEP 164
+ + +++ + + M N+ A+++ P++ + + + I LP + PEP
Sbjct: 61 TT----KGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEP 116
Query: 165 YSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACK------HYEDRIADV-ICAGMPQ 214
++ GWG+ + + E ++ +C+ + I D CAG
Sbjct: 117 DTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEY 176
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
GD+G P + + GV S+ P V+ RV +V
Sbjct: 177 DETYIGYGDAGDPAVQ-------NGTLVGVASYISSMP-SEFPSVFLRVGYYVLD 223
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 253 bits (648), Expect = 6e-85
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 26/241 (10%)
Query: 46 VVGGKKAELGAWPWLIALY-RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
++ G ++ PW AL R +CG V++ W++TAAHC K F V G
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCR----KKVFRVRLGHYS 56
Query: 105 RFSFS-PTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPE 163
+Q+ + + H + +NDL L++L +R + VRPI + + P
Sbjct: 57 LSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVS--SHCPS 114
Query: 164 PYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGRD 218
+ C GWG P ++ + + +L C Y +I D CAG + GRD
Sbjct: 115 AGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGD-KAGRD 173
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGE-GCARPNEPGVYTRVSQFVPW----LMSN 273
+CQGDSGGP++C + G+VS G+ CARPN PGVYT + +F W + +N
Sbjct: 174 SCQGDSGGPVVC-------NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQAN 226
Query: 274 S 274
S
Sbjct: 227 S 227
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 253 bits (648), Expect = 6e-85
Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 32/241 (13%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG K E + PW +A+ + + CGGV++D SWV+TAAHC + ++V G
Sbjct: 1 IVGGYKCEKNSQPWQVAVINE--YLCGGVLIDPSWVITAAHCY----SNNYQVLLGRNNL 54
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT-----------NDLALLQLAAPLRYNRYVRPIC 154
F P Q R V + H + +T NDL LL L+ P V+ I
Sbjct: 55 FKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVID 114
Query: 155 LPDVTETPEPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--AC-KHYEDRIADV-IC 209
LP T+ P+ STC A GWG+ ++ V + +L C + Y+D + DV +C
Sbjct: 115 LP--TKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLC 172
Query: 210 AGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVP 268
AG +GG+DTC GDSGGPL+C + G+ S G CA+P P +Y ++ +F
Sbjct: 173 AGEMEGGKDTCAGDSGGPLIC-------DGVLQGITSGGATPCAKPKTPAIYAKLIKFTS 225
Query: 269 W 269
W
Sbjct: 226 W 226
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 258 bits (660), Expect = 1e-84
Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 43 SGRVVGGKKAELGAWPWLIAL----YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEV 98
S RV G + +L + PW+ L + + F CGG ++ E +++TAAHCV G + +E+
Sbjct: 116 SQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEI 175
Query: 99 YAG------------MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRY 146
G R+ +P + + ++H + + +D+ALL+L + +
Sbjct: 176 RLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPF 235
Query: 147 NRYVRPICLPDVTETPEP---YSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-Y 200
++++PICLP E E ST GWG E+G D + + VP+ P AC Y
Sbjct: 236 QKHIKPICLPITDELKEKAEQISTYFVTGWGTT-ENGSSSDVLLQANVPLQPRSACSQAY 294
Query: 201 EDRIAD-VICAGMPQGGRDTCQGDSGGPLLCPVPGS---QGRWYVAGVVSHG-EGCARPN 255
+ +C G +D+C+GDSGGPL P + G+VS G C + +
Sbjct: 295 RRAVPLSQLCVG-GGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQIS 353
Query: 256 EPGVYTRVSQFVPWLMSN 273
PG+YT V ++V W+
Sbjct: 354 LPGLYTNVGEYVQWITDT 371
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 252 bits (645), Expect = 1e-84
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 21/238 (8%)
Query: 48 GGKKAELGAWPWLIALYR---DGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
GG+K ++ PW +A+ + CGG +L + +V+TAAHCV + +
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTN 61
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRY-VRPICLPDVTETPE 163
+ + P V S +++ M ND+A+L+L+ PL+ + +P LPD+ P+
Sbjct: 62 LWE--DPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPK 119
Query: 164 PYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK--HYEDRIAD-VICAGMPQGGRD 218
S G+G P ++ Q+ ++ C+ + ++ V CA + G
Sbjct: 120 TGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQ--KVGVS 177
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSNSER 276
GD+G P + + + GV ++ P V+T+V +V W+ ++
Sbjct: 178 LESGDAGDPTVQ-------QDTLVGVAAYFPKRP-EGAPEVFTKVGSYVSWIQDIIKK 227
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 252 bits (645), Expect = 2e-84
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 17/234 (7%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
+VGG +A +WP AL+ D + CGG ++ W++TAAHC+DG + +V G
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDG--AGFVDVVLGAHNI 58
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
T+ + +H + ++ND+A+++L P+ + + LP +
Sbjct: 59 REDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLP--STDVGVG 116
Query: 166 STCTAVGWGAVFEHGPD-PDHMREVQVPILP--ACKHYEDRIAD-VICAGMPQGGRDTCQ 221
+ T GWG + D +R+V VPI+ C + D IC GG+ TC
Sbjct: 117 TVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDST-GGKGTCN 175
Query: 222 GDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPWLMSNS 274
GDSGGPL G+ S G P +TRV+ F+ W+ + +
Sbjct: 176 GDSGGPLNY-------NGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 251 bits (644), Expect = 2e-84
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 46 VVGGKKAELGAWPWLIALY---RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGM 102
++GG+++ + P++ L G CGG ++ E +V+TAAHC V G
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS----NINVTLGA 56
Query: 103 LRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETP 162
T+Q R + H + + + ND+ LLQL+ +R NR V P+ LP E
Sbjct: 57 HNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGL 116
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGRD 218
P + CT GWG V D +REVQ+ + C + + IC G + +
Sbjct: 117 RPGTLCTVAGWGRV-SMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKA 175
Query: 219 TCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
+GDSGGPLLC G+VS+G+ P P V+TRVS F+PW
Sbjct: 176 AFKGDSGGPLLC-------NNVAHGIVSYGKSSGVP--PEVFTRVSSFLPW 217
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 251 bits (643), Expect = 3e-84
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++ G++ + PW AL++ CGGV++ + WV+TAAHC K + V G
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCK----KQKYSVRLGDHSL 56
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMT---NDLALLQLAAPLRYNRYVRPICLPDVTETP 162
S EQ V++ + H + + +D+ L++L V+P+ L P
Sbjct: 57 QSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLA--NLCP 114
Query: 163 EPYSTCTAVGWGAVFEHGPD-PDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGR 217
+ C GWG V + P+ + +V I C + Y +I + +CAG G
Sbjct: 115 KVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSS-NGA 173
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CARPNEPGVYTRVSQFVPW 269
DTCQGDSGGPL+C + G+ S G C +P +PGVYT++ ++ W
Sbjct: 174 DTCQGDSGGPLVC-------DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTW 219
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 247 bits (633), Expect = 9e-83
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 46 VVGGKKAELGAWPWLIALY----RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
++GG + + P++ CGG ++ + +V+TAAHC V G
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGR----SMTVTLG 56
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
+ T+Q+ PV++ + H + + +ND+ LL+L + R VRP+ LP
Sbjct: 57 AHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAH 116
Query: 162 PEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK--HYEDRIADV-ICAGMPQGG 216
+P C GWG V G P + EV++ + C+ IC G +
Sbjct: 117 VKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIK 176
Query: 217 RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
+ + DSGGPL+C + AG+VS+G+ P V+TRV FV W
Sbjct: 177 GASFEEDSGGPLVC-------KRAAAGIVSYGQTDGSA--PQVFTRVLSFVSW 220
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 240 bits (615), Expect = 3e-79
Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 22/233 (9%)
Query: 45 RVVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGML 103
+ +L PW + L +G CGGV++ E++V+T A C V
Sbjct: 52 LTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRN--ITVKTYFN 109
Query: 104 RRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDV---TE 160
R S + ++ + +H + NDL+LL+L P++ P+C P+
Sbjct: 110 RT---SQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEH 166
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACKH-YEDRIADV-ICAGMPQGG 216
P + GW + + V ++ C + C
Sbjct: 167 LLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCER---SS 221
Query: 217 RDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPW 269
G + +G W++ GV+ + + T+VS++ W
Sbjct: 222 VAAMHWMDGSVVTRE---HRGSWFLTGVLG-SQPVGGQAHMVLVTKVSRYSLW 270
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 241 bits (618), Expect = 3e-79
Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 23/256 (8%)
Query: 23 GNPLGARNMATDMAGNPILGSGRVVGGKKAELGAWPWLIALYR-DGFFHCGGVVLDESWV 81
G LG + G + +L PW + L +G CGGV++ E++V
Sbjct: 72 GYRLGEDHKQCVPHDQCACGV-LTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFV 130
Query: 82 MTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLA 141
+T A C V R S + ++ + +H + NDL+LL+L
Sbjct: 131 LTTAKCSLLHRN--ITVKTYFNRT---SQDPLMIKITHVHVHMRYDADAGENDLSLLELE 185
Query: 142 APLRYNRYVRPICLPDV---TETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--A 196
P++ P+C P+ P + GW + + V ++
Sbjct: 186 WPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGEE 243
Query: 197 CKH-YEDRI-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARP 254
C + C G + +G W++ GV+ +
Sbjct: 244 CGQVLNVTVTTRTYCER---SSVAAMHWMDGSVVTRE---HRGSWFLTGVLG-SQPVGGQ 296
Query: 255 NEPGVYTRVSQFVPWL 270
+ T+VS++ W
Sbjct: 297 AHMVLVTKVSRYSLWF 312
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 227 bits (582), Expect = 5e-75
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 29/242 (11%)
Query: 46 VVGGKKAELGAWPWLIALY----RDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAG 101
++ G +A G +P+ L CGG ++D W++TAAHCV VY G
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAV--SVVVYLG 58
Query: 102 MLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTET 161
++ E V RI+ HSMF ND+AL+++ + Y ++PI LP E
Sbjct: 59 SAVQYE---GEAVVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGEEL 114
Query: 162 PEPY--STCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK--HYEDRIAD-VICAGMPQ 214
+ T GWG D ++ ++ C + I + IC
Sbjct: 115 NNKFENIWATVSGWGQS---NTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTS- 170
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVS--HGEGCARPNEPGVYTRVSQFVPWLMS 272
G+ C GDSGGP + + + GVVS G GC +P ++RV+ ++ W+
Sbjct: 171 DGKSPCFGDSGGPFVL-----SDKNLLIGVVSFVSGAGCE-SGKPVGFSRVTSYMDWIQQ 224
Query: 273 NS 274
N+
Sbjct: 225 NT 226
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 236 bits (602), Expect = 1e-74
Identities = 53/285 (18%), Positives = 95/285 (33%), Gaps = 64/285 (22%)
Query: 45 RVVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKH-YFEVYAGML 103
+ ++ PW + + C G ++ + WV+TAAHC H + V G
Sbjct: 223 GNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDP 282
Query: 104 RRFSFSPTEQVRPVSRIVMHSMF---------KRAEMTNDLALLQLAAPLRYNRYVRPIC 154
+ + + + V+ F +D+ALL+LA ++ + + RPIC
Sbjct: 283 KS----QWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPIC 338
Query: 155 LPDVTET-----PEPYSTCTAVGWGAVFEHG--PDPDHMREVQVPIL------------- 194
LP E STC + + + ++ I
Sbjct: 339 LPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEV 398
Query: 195 --------PACKHYEDRI-ADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVV 245
P + + +C+G Q C+G+SGG + + R++ G+V
Sbjct: 399 VSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLER---RFRFFQVGLV 454
Query: 246 SHG-----EGCAR------------PNEPGVYTRVSQFVPWLMSN 273
S G G A P + + + PWL +
Sbjct: 455 SWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWLRQH 499
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 239 bits (611), Expect = 1e-73
Identities = 85/239 (35%), Positives = 122/239 (51%), Gaps = 18/239 (7%)
Query: 43 SGRVVGGKKAELGAWPWLIALYRDGFFH-CGGVVLDESWVMTAAHCVDGFEK-HYFEVYA 100
GRVVGG A +WPW ++L H CGG ++ WV+TAAHC++ + ++V
Sbjct: 559 PGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVIL 618
Query: 101 GMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTE 160
G + + P Q VSR+ + D+ALL+L++P V P CLP
Sbjct: 619 GAHQEVNLEPHVQEIEVSRLFLEPTR------KDIALLKLSSPAVITDKVIPACLPSPNY 672
Query: 161 TPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILP--ACK---HYEDRIADV-ICAGMPQ 214
+ C GWG + ++E Q+P++ C R+ +CAG
Sbjct: 673 VVADRTECFITGWGET-QGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLA 731
Query: 215 GGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
GG D+CQGDSGGPL+C + ++ + GV S G GCARPN+PGVY RVS+FV W+
Sbjct: 732 GGTDSCQGDSGGPLVCF---EKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 787
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 230 bits (587), Expect = 1e-72
Identities = 58/286 (20%), Positives = 95/286 (33%), Gaps = 68/286 (23%)
Query: 45 RVVGGKKAELGAWPWLIALY----RDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVY 99
K + PW + G C G V+ E +V+TAAHC +K H +V
Sbjct: 214 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVS 273
Query: 100 AGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT---------NDLALLQLAAPLRYNRYV 150
G ++ + ++ H + D+AL++L L+Y + +
Sbjct: 274 VG--------GEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTI 325
Query: 151 RPICLPDVTETPEPYSTCTAVGWGAVFE------------HGPDPDHMREVQVPILP--- 195
RPICLP T E + + +V I
Sbjct: 326 RPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDK 385
Query: 196 --ACKH-------------YEDRI-ADVICAG--MPQGGRDTCQGDSGGPLLCPVPGSQG 237
+C+ + + +C G P +TC+GDSGGPL+ +
Sbjct: 386 KGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK---RS 442
Query: 238 RWYVAGVVSHG--EGCARPNE--------PGVYTRVSQFVPWLMSN 273
R+ GV+S G + C + + Q +PWL
Sbjct: 443 RFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 488
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 209 bits (534), Expect = 7e-63
Identities = 59/286 (20%), Positives = 96/286 (33%), Gaps = 68/286 (23%)
Query: 45 RVVGGKKAELGAWPWLIALY----RDGFFHCGGVVLDESWVMTAAHCVDGFEK-HYFEVY 99
K + PW + G C G V+ E +V+TAAHC +K H +V
Sbjct: 456 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVS 515
Query: 100 AGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT---------NDLALLQLAAPLRYNRYV 150
G ++ + ++ H + D+AL++L L+Y + +
Sbjct: 516 VGG--------EKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTI 567
Query: 151 RPICLPDVTETPE-----PYSTCTAVGWGAVFEHG-------PDPDHMREVQVPILP--- 195
RPICLP T P +TC + + + +V I
Sbjct: 568 RPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDK 627
Query: 196 --ACKHYEDRIA--------------DVICAG--MPQGGRDTCQGDSGGPLLCPVPGSQG 237
+C+ +C G P +TC+GDSGGPL+ +
Sbjct: 628 KGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHK---RS 684
Query: 238 RWYVAGVVS--HGEGCARPNE--------PGVYTRVSQFVPWLMSN 273
R+ GV+S + C + + Q +PWL
Sbjct: 685 RFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 730
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 171 bits (437), Expect = 3e-54
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 17/145 (11%)
Query: 133 NDLALLQLAAPLRYNRYVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPD---PDHMREV 189
+DL LL+L +P + V+ + LP T+ PE STC A GWG++ D PD ++ V
Sbjct: 8 HDLMLLRLQSPAKITDAVKVLELP--TQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCV 65
Query: 190 QVPILP--ACKH-YEDRIADV-ICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVV 245
Q+ +L C + D++ + +CAG GG+DTC GDSGGPL+C G W G+
Sbjct: 66 QLTLLQNTFCADAHPDKVTESMLCAGYLPGGKDTCMGDSGGPLIC-----NGMWQ--GIT 118
Query: 246 SHGEG-CARPNEPGVYTRVSQFVPW 269
S G C N+P +YT++ ++ W
Sbjct: 119 SWGHTPCGSANKPSIYTKLIFYLDW 143
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 157 bits (400), Expect = 7e-49
Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 46 VVGGKKAELGAWPWLIAL-YRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLR 104
+V G++A G+WPW ++L + GF CGG +++E+WV+TAAHC V AG
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC---GVTTSDVVVAGEFD 57
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ S S Q ++++ +S + + ND+ LL+L+ +++ V +CLP ++
Sbjct: 58 QGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAA 117
Query: 165 YSTCTAVGWGA 175
+TC GWG
Sbjct: 118 GTTCVTTGWGL 128
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 126 bits (319), Expect = 3e-37
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 180 GPDPDHMREVQVPILP--AC-KHYEDRIADV-ICAGMPQGGRDTCQGDSGGPLLCPVPGS 235
PD +++ +P+L C K++ +I D ICAG G +C GDSGGPL+C
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAG--ASGVSSCMGDSGGPLVCK---K 55
Query: 236 QGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSN 273
G W + G+VS G + PGVY RV+ V W+
Sbjct: 56 NGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 89.5 bits (223), Expect = 3e-23
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 46 VVGGKKAELGAWPWLIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRR 105
++GG++ E + PW +A+Y F CGGV+++ WV+TAAHC + +EV+ G
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKND----NYEVWLGRHNL 56
Query: 106 FSFSPTEQVRPVSRIVMH 123
F T Q V+ H
Sbjct: 57 FENENTAQFFGVTADFPH 74
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 83.1 bits (205), Expect = 3e-19
Identities = 39/242 (16%), Positives = 65/242 (26%), Gaps = 38/242 (15%)
Query: 46 VVGG-----KKAELGAWPW-LIALYRDGFFHCGGVVLDESWVMTAAHCV----DGFEKHY 95
VV G K A P+ IA G C G ++ + ++T HCV
Sbjct: 1 VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60
Query: 96 FEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICL 155
VY G S + V D A+++ + V +
Sbjct: 61 GSVYPG--MNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSI 116
Query: 156 PDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILPACKHYEDRIADVICAGMPQG 215
T +T G+ E+ + +
Sbjct: 117 R--QVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSV------------TREDTNLAYY 162
Query: 216 GRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVS-QFVPWLMSNS 274
DT G+SG +L + GV + G N + + FV ++
Sbjct: 163 TIDTFSGNSGSAML------DQNQQIVGVHNAGYSNGTIN---GGPKATAAFVEFINYAK 213
Query: 275 ER 276
+
Sbjct: 214 AQ 215
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 60.5 bits (146), Expect = 4e-11
Identities = 31/216 (14%), Positives = 53/216 (24%), Gaps = 27/216 (12%)
Query: 55 GAWPWLIALY---RDGFFHCGGVVLD---ESWVMTAAHCV----DGFEKHYFEVYAGMLR 104
P + ++ G F C ++ +S V TA HC+ G F
Sbjct: 4 ADSPHIGKVFFSTNQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPA--Y 61
Query: 105 RFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEP 164
+ S + R + +D A L + +
Sbjct: 62 DYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPR 121
Query: 165 YSTCTAVGWGAVFEHGPDPDHMREVQVPILPACKHYEDRIADVICAGMPQGGRDTCQGDS 224
+A G+ A + + D + + + G S
Sbjct: 122 GQYYSAYGYPA--AAPFNGQELHSCHGTATN----------DPMGSSTQGIPCNMTGGSS 169
Query: 225 GGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVY 260
GGP G+ S+G G Y
Sbjct: 170 GGPWFL---GNGTGGAQNSTNSYGYTFLPNVMFGPY 202
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 43.1 bits (100), Expect = 5e-05
Identities = 36/244 (14%), Positives = 59/244 (24%), Gaps = 48/244 (19%)
Query: 60 LIALYRDGFFHCGGVVLDES------WVMTAAHCVDGFEKHY--------FEVYAGMLRR 105
+ A + G C G +++ + + +TA HC G ++
Sbjct: 25 VGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84
Query: 106 FSFSPTEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPY 165
S +S+ S K T+D LL+L P
Sbjct: 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLEL------------------NNAANPA 126
Query: 166 STCTAVGWGAVFEHGPDPDHMREVQVPILPACKHYEDRIADVICAGMP--------QGGR 217
GW ++ P + V G Q
Sbjct: 127 FNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNVQWQPSG 186
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEG-CA--RPNEPGVYTRVSQFVPWLMSNS 274
+ S G + V G + G C+ N Y RV + +
Sbjct: 187 GVTEPGSSGSPIY-----SPEKRVLGQLHGGPSSCSATGTNRSDQYGRVFTSWTGGGAAA 241
Query: 275 ERAK 278
R
Sbjct: 242 SRLS 245
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 39.3 bits (91), Expect = 7e-04
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 56 AWPW-----LIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSP 110
+ + G F GVV+ + ++T H VD L+ F +
Sbjct: 16 NGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGD-----PHALKAFPSAI 70
Query: 111 TEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAP 143
+ P + K + DLA+++ +
Sbjct: 71 NQDNYPNGGFTAEQITKYSG-EGDLAIVKFSPN 102
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 36.7 bits (84), Expect = 0.005
Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 11/99 (11%)
Query: 56 AWPW-----LIALYRDGFFHCGGVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSP 110
+ + G F GVV+ + ++T H VD + A F +
Sbjct: 16 NGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKA-----FPSAI 70
Query: 111 TEQVRPVSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRY 149
+ P + K + DLA+++ + +
Sbjct: 71 NQDNYPNGGFTAEQITKYSG-EGDLAIVKFSPNEQNKHI 108
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 35.7 bits (82), Expect = 0.011
Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 16/95 (16%)
Query: 73 GVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT 132
GV++ ++ ++T H K+ + F+ + + F+ E+
Sbjct: 52 GVLIGKNTIVTNYHVAREAAKNPSNI------IFTPAQNRDAEKNEFPTPYGKFEAEEIK 105
Query: 133 -------NDLALLQLAAPLRY---NRYVRPICLPD 157
DLA+++L + ++P +PD
Sbjct: 106 ESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPD 140
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Length = 204
Score = 30.6 bits (69), Expect = 0.37
Identities = 21/183 (11%), Positives = 50/183 (27%), Gaps = 44/183 (24%)
Query: 73 GVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMT 132
G V+ ++ ++T H ++ + + + ++
Sbjct: 26 GFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINY----------PGK 75
Query: 133 NDLALLQL--------AAPLRYNRYVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPD 184
D++++Q+ +N V P + +G + H
Sbjct: 76 EDVSVIQVEERAIERGPKGFNFNDNVTPFKYAA---GAKAGERIKVIG----YPHPYKNK 128
Query: 185 H-MREVQVPILPACKHYEDRIADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAG 243
+ + E P++ I T G+SG P+L + G
Sbjct: 129 YVLYESTGPVM-------SVEGSSI-----VYSAHTESGNSGSPVL------NSNNELVG 170
Query: 244 VVS 246
+
Sbjct: 171 IHF 173
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 30.3 bits (69), Expect = 0.67
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 100 AGMLRRFSFSPTEQVRPVSRIVMHS 124
RRF P R ++++ +
Sbjct: 351 RAFFRRFRLDPLPFPRVLAQVTLRP 375
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 30.3 bits (69), Expect = 0.84
Identities = 5/27 (18%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 100 AGMLRRFSF--SPTEQVRPVSRIVMHS 124
A +L+R F P ++ + +
Sbjct: 404 AKLLQRLEFRLVPGQRFGLQEQATLKP 430
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal,
mitochondrion, protein- complex; 1.8A {Mus musculus}
PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Length = 157
Score = 29.3 bits (65), Expect = 0.91
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 4/75 (5%)
Query: 62 ALYRDGFFHCGGVVLDESWVMTAAHC----VDGFEKHYFEVYAGMLRRFSFSPTEQVRPV 117
+L + V ES A +K + L F + R +
Sbjct: 16 SLAEHYLQYVLQVPAFESAPSQACRVLQRVAFSVQKEVEKNLKSYLDDFHVESIDTARII 75
Query: 118 SRIVMHSMFKRAEMT 132
VM F+ +
Sbjct: 76 FNQVMEKEFEDGIIN 90
>3h09_A IGA1 protease, immunoglobulin A1 protease; serine protease, beta
helix, hydrolase, M protease, secreted, transmembrane,
virulence; 1.75A {Haemophilus influenzae}
Length = 989
Score = 30.1 bits (66), Expect = 1.1
Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCA 252
GDSG PL +G+W G G
Sbjct: 260 LGDSGSPLFV-YDREKGKWLFLGSYDFWAGYN 290
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A
{Escherichia coli O157}
Length = 968
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 221 QGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVSQFVPWLMSNS 274
QGD+G L + +W VAG V A Y++ +Q + N
Sbjct: 205 QGDAGSALFV-YDNQKKKWVVAGTVWGIYNYANGKNHAAYSKWNQTTIDNLKNK 257
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase;
2.40A {Sesbania mosaic virus}
Length = 191
Score = 28.2 bits (62), Expect = 2.8
Identities = 22/173 (12%), Positives = 38/173 (21%), Gaps = 38/173 (21%)
Query: 60 LIALYRDGFFHCGGVVLD---ESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRP 116
L+A+ G E ++TA H + AG
Sbjct: 18 LVAIKSGPTTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEIS---- 73
Query: 117 VSRIVMHSMFKRAEMTNDLALLQLAAPLRYNRYVRPICLPDVTETPEPYSTCTAVGWGAV 176
++ D A++++ + + + P T G
Sbjct: 74 ---------MSSSDKMLDFAIVRVPT----HVWSKLGVKSTPLVCPSSKDVITCYG---- 116
Query: 177 FEHGPDPDHMREVQVPILPACKHYEDRIADVICAGMPQGGRDTCQGDSGGPLL 229
G D + + T G SG PL
Sbjct: 117 ---GSSSDCLMSGVGSSSTS-----------EFTWKLTHTCPTAAGWSGTPLY 155
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus
aureus} PDB: 2w7u_A
Length = 200
Score = 27.8 bits (62), Expect = 3.7
Identities = 10/76 (13%), Positives = 25/76 (32%), Gaps = 19/76 (25%)
Query: 73 GVVLDESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEM- 131
GVV+ ++ ++T H + R S + + + + ++
Sbjct: 26 GVVVGKNTIVTNKHIAKSNDI--------FKNRVSAHHSSKGKGGGN------YDVKDIV 71
Query: 132 ----TNDLALLQLAAP 143
DLA++ +
Sbjct: 72 EYPGKEDLAIVHVHET 87
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second
tetrahedral inter tetrapeptide, beta barrels, alpha
helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus}
SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E
2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E
2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E
...
Length = 185
Score = 27.5 bits (61), Expect = 4.4
Identities = 31/188 (16%), Positives = 48/188 (25%), Gaps = 37/188 (19%)
Query: 77 DESWVMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSRIVMHSMFKRAEMTNDLA 136
+ +TA HC DG + + + + + + ND
Sbjct: 24 STYYFLTAGHCTDGATTWW-------------ANSARTTVLGTTS-----GSSFPNNDYG 65
Query: 137 LLQLAAPLRYNRYVRPICLPDVTETPEPYSTCTAVGWGAVFEHGPDPDHMREVQVPILPA 196
+++ T G G V L A
Sbjct: 66 IVRYTNTTIPKDGTVGGQDITSAANATVGMAVTRRGSTTGTHSG---------SVTALNA 116
Query: 197 CKHYEDRIADVICAGMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNE 256
+Y + GM + GDSGGPL S R G+ S G G
Sbjct: 117 TVNYGG---GDVVYGMIRTNVCAEPGDSGGPLY-----SGTR--AIGLTSGGSGNCSSGG 166
Query: 257 PGVYTRVS 264
+ V+
Sbjct: 167 TTFFQPVT 174
>1hpg_A Glutamic acid specific protease; serine protease,
hydrolase-hydrolase inhibitor complex; 1.50A
{Streptomyces griseus} SCOP: b.47.1.1
Length = 187
Score = 27.2 bits (60), Expect = 4.5
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 211 GMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVS 264
M + + GDSGG GS G+ S GC+ ++ V+
Sbjct: 130 NMVRTTACSAGGDSGGAH---FAGSV----ALGIHSGSSGCSGTAGSAIHQPVT 176
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 27.2 bits (61), Expect = 6.2
Identities = 4/27 (14%), Positives = 9/27 (33%), Gaps = 2/27 (7%)
Query: 100 AGMLRRFSF--SPTEQVRPVSRIVMHS 124
ML+ F F ++ + +
Sbjct: 415 GMMLKHFDFEDHTNYELDIKETLTLKP 441
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S;
oxidoreductase, selenium, selenocysteine, seCys,
molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli}
SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Length = 1015
Score = 27.6 bits (61), Expect = 6.3
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 163 EPYSTCTAVGWGAVFEHGPDPDHMREVQVPILPACKHYE 201
+P T T+ W E + +V LP+ E
Sbjct: 583 DPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAE 621
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA
compl protease/ntpase/helicase, hydrolase; 1.95A
{Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4a92_A*
1cu1_A 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A*
3kqh_A 3kqk_A 8ohm_A 2f55_A 1jr6_A 1onb_A
Length = 666
Score = 27.3 bits (60), Expect = 7.5
Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 11/67 (16%)
Query: 218 DTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCA----------RPNEPGVYTRVSQFV 267
+G SGGPLLCP G + A V + G A V+T S
Sbjct: 168 SYLKGSSGGPLLCPS-GHAVGIFRAAVCTRGVAKAVDFVPVESMETTMRSPVFTDNSSPP 226
Query: 268 PWLMSNS 274
S
Sbjct: 227 AVPQSFQ 233
>1msk_A Cobalamin-dependent methionine synthase; methyltransferase,
transferase, methionine biosynthesis, vitamin B12; HET:
SAM; 1.80A {Escherichia coli K12} SCOP: d.173.1.1
Length = 331
Score = 27.0 bits (60), Expect = 8.1
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Query: 73 GVVLDESWVMTAAHCVDGF-----EKHYFEV 98
G+ L ES+ M V G+ + Y+ V
Sbjct: 266 GMKLTESFAMWPGASVSGWYFSHPDSKYYAV 296
>1o0l_A Apoptosis regulator BCL-W; helical bundle, binding groove, BH3; NMR
{Homo sapiens} SCOP: f.1.4.1
Length = 188
Score = 26.6 bits (58), Expect = 8.6
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 63 LYRDGFFHCGGVVLDESW---VMTAAHCVDGFEKHYFEVYAGMLRRFSFSPTEQVRPVSR 119
L + G+ G + D FE + ++ + + +P +
Sbjct: 27 LRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTP-GSAQQRFT 85
Query: 120 IVMHSMFK 127
V +F+
Sbjct: 86 QVSDELFQ 93
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability,
electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Length = 188
Score = 26.4 bits (58), Expect = 9.5
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 211 GMPQGGRDTCQGDSGGPLLCPVPGSQGRWYVAGVVSHGEGCARPNEPGVYTRVS 264
+ + GDSGG + G+Q GV S G G R Y V+
Sbjct: 130 SLTRTSVCAEPGDSGGSF---ISGTQ----AQGVTSGGSGNCRTGGTTFYQEVN 176
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.138 0.455
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,766,775
Number of extensions: 303291
Number of successful extensions: 1219
Number of sequences better than 10.0: 1
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 129
Length of query: 286
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 193
Effective length of database: 4,105,140
Effective search space: 792292020
Effective search space used: 792292020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (25.6 bits)