BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10849
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04650|LMX1A_MESAU LIM homeobox transcription factor 1-alpha OS=Mesocricetus auratus
GN=LMX1A PE=2 SV=1
Length = 382
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 22/164 (13%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ VKC C + + P+E VMRAQ VYHL CF C +C + LQKG++F+L+ GQL C+ D
Sbjct: 88 KLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 147
Query: 76 FEKEMYLMQQSSP--SDDMMLDEN---CR---------PRDGR--RGPKRPRTILTSAQR 119
+EKE L+ SP SD D+ C+ DG+ + PKRPRTILT+ QR
Sbjct: 148 YEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTSEDGKDHKRPKRPRTILTTQQR 207
Query: 120 RQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
R FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 251
>sp|Q9JKU8|LMX1A_MOUSE LIM homeobox transcription factor 1-alpha OS=Mus musculus GN=Lmx1a
PE=2 SV=1
Length = 382
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 22/164 (13%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ VKC C + + P+E VMRAQ VYHL CF C +C + LQKG++F+L+ GQL C+ D
Sbjct: 88 KLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 147
Query: 76 FEKEMYLMQQSSP--SDDMMLDEN---CR---------PRDGR--RGPKRPRTILTSAQR 119
+EKE L+ SP SD D+ C+ DG+ + PKRPRTILT+ QR
Sbjct: 148 YEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQR 207
Query: 120 RQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
R FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 251
>sp|Q8TE12|LMX1A_HUMAN LIM homeobox transcription factor 1-alpha OS=Homo sapiens GN=LMX1A
PE=2 SV=1
Length = 382
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 95/164 (57%), Gaps = 22/164 (13%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ VKC C + + P+E VMRAQ VYHL CF C +C + LQKG++F+L+ GQL C+ D
Sbjct: 88 KLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 147
Query: 76 FEKEMYLMQQSSP--SDDMMLDEN---CRPRDG-----------RRGPKRPRTILTSAQR 119
+EKE L+ SP SD D+ C+ G + PKRPRTILT+ QR
Sbjct: 148 YEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQR 207
Query: 120 RQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
R FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 251
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b
PE=2 SV=2
Length = 372
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ KC+ C +++ P E VMRA VYHL CF C +C + L+KG++F+L+ GQL C+ D
Sbjct: 86 QLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 145
Query: 76 FEKEMYLMQQSSPSDDMML-----DENCRPRDGR--------------RGPKRPRTILTS 116
+EKE L+ SP + + D + +P G+ R PKRPRTILT+
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTT 205
Query: 117 AQRRQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
QRR FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 206 QQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 252
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B
PE=1 SV=2
Length = 379
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ KC+ C +++ P E VMRA VYHL CF C +C + L+KG++F+L+ GQL C+ D
Sbjct: 86 QLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 145
Query: 76 FEKEMYLMQQSSPSDDMML-----DENCRPRDGR--------------RGPKRPRTILTS 116
+EKE L+ SP + + D + +P G+ R PKRPRTILT+
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTT 205
Query: 117 AQRRQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
QRR FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 206 QQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 252
>sp|Q60564|LMX1B_MESAU LIM homeobox transcription factor 1-beta (Fragment) OS=Mesocricetus
auratus GN=LMX1B PE=2 SV=1
Length = 369
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 96/167 (57%), Gaps = 25/167 (14%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ KC+ C +++ P E VMRA VYHL CF C +C + L+KG++F+L+ GQL C+ D
Sbjct: 76 QLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 135
Query: 76 FEKEMYLMQQSSPSDDMML-----DENCRPR------------DGR--RGPKRPRTILTS 116
+EKE L+ SP + + D + +P DG+ R PKRPRTILT+
Sbjct: 136 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGGGDDGKDPRRPKRPRTILTT 195
Query: 117 AQRRQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
QRR FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 196 QQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 242
>sp|Q8UVR3|LMX1B_XENLA LIM homeobox transcription factor 1-beta.1 OS=Xenopus laevis
GN=lmx1b.1 PE=2 SV=1
Length = 400
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 95/166 (57%), Gaps = 24/166 (14%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ KC+ C +++ P E VMRA VYHL CF C +C + L+KG++F+L+ GQL C+ D
Sbjct: 109 QLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSD 168
Query: 76 FEKEMYLMQQSSPSDDMML-----DENCRPRDGR-------------RGPKRPRTILTSA 117
+EKE L+ SP D + + + +P GR R PKRPRTILT+
Sbjct: 169 YEKEKDLLSSGSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQ 228
Query: 118 QRRQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
QRR FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 229 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIK 274
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 48/189 (25%)
Query: 28 RLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEKEMYL----- 82
R + +MR +H C C +C QPL F R +LFC+QD+++
Sbjct: 61 RPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYF--RDRKLFCKQDYQQLFAAKCSGC 118
Query: 83 MQQSSPSDDMMLDENCR-----------PRDGRRGPK---RPRTILTSAQRRQFKSSF-- 126
M++ +P++ +M C R R+G + + +L + + K
Sbjct: 119 MEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSS 178
Query: 127 ----------------EVSPKPCRKVSTMNSKRAKN---------ILTPNQRRQFKSSFE 161
+V P R S K+ ILT QRR FK+SFE
Sbjct: 179 GSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFE 238
Query: 162 ISSMPCRKV 170
+SS PCRKV
Sbjct: 239 VSSKPCRKV 247
>sp|P53413|LMX1B_CHICK LIM/homeobox protein LMX-1.2 OS=Gallus gallus GN=LMX1B PE=2 SV=1
Length = 377
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 94/166 (56%), Gaps = 24/166 (14%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
+L+ KC+ C +++ P E VMRA VYHL CF C +C + L+KG++F+L+ GQL C+ D
Sbjct: 86 QLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSD 145
Query: 76 FEKEMYLMQQSSPSDDMMLDE-----NCRPRDGR-------------RGPKRPRTILTSA 117
+EKE L+ SP D + + +P G+ R PKRPRTILT+
Sbjct: 146 YEKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQ 205
Query: 118 QRRQFKSSFEVSPKPCRKV------STMNSKRAKNILTPNQRRQFK 157
QRR FK+SFEVS KPCRKV T S R + NQR + K
Sbjct: 206 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMK 251
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 48/189 (25%)
Query: 28 RLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEKEMYL----- 82
R + +MR +H C C +C Q L F R +L+C+QD+++
Sbjct: 38 RPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYF--RDRKLYCKQDYQQLFAAKCSGC 95
Query: 83 MQQSSPSDDMMLDENCR-----------PRDGRRGPK---RPRTILTSAQRRQFKSSF-- 126
M++ +P++ +M C R R+G + + +L + + K
Sbjct: 96 MEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSS 155
Query: 127 ----------------EVSPKPCRKVSTMNSKRAKN---------ILTPNQRRQFKSSFE 161
+V P + S K+ ILT QRR FK+SFE
Sbjct: 156 VSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFE 215
Query: 162 ISSMPCRKV 170
+SS PCRKV
Sbjct: 216 VSSKPCRKV 224
>sp|Q25132|LHX3_HALRO LIM/homeobox protein Lhx3 OS=Halocynthia roretzi GN=LHX3 PE=2 SV=2
Length = 692
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 8 VSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQF-ILR 66
V C F+ +G KC CG + P E++ RAQ +VYHL F C +C + + G+QF +L
Sbjct: 327 VFCKDDFFKRFGTKCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQFYLLE 386
Query: 67 SGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQFKSSF 126
+L C++D+E+ R D G KRPRT +T+ Q KS++
Sbjct: 387 DNRLVCKKDYEQ-----------------AKSRDADIENGVKRPRTTITAKQLETLKSAY 429
Query: 127 EVSPKPCRKV 136
SPKP R V
Sbjct: 430 NQSPKPARHV 439
>sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 OS=Homo sapiens GN=LHX4 PE=1 SV=2
Length = 390
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 19/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KC C + P ++V +AQ VYHL CF C+IC + L G++
Sbjct: 70 SRAGSVYCKEDFFKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDE 129
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ G+L C++D+E ++ +D D G KRPRT +T+ Q
Sbjct: 130 FYLMEDGRLVCKEDYE--------TAKQND----------DSEAGAKRPRTTITAKQLET 171
Query: 122 FKSSFEVSPKPCRKV 136
K++++ SPKP R V
Sbjct: 172 LKNAYKNSPKPARHV 186
>sp|P53776|LHX4_MOUSE LIM/homeobox protein Lhx4 OS=Mus musculus GN=Lhx4 PE=1 SV=4
Length = 390
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 19/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KC C + P ++V +AQ VYHL CF C+IC + L G++
Sbjct: 70 SRAGSVYCKEDFFKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDE 129
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ G+L C++D+E ++ +D D G KRPRT +T+ Q
Sbjct: 130 FYLMEDGRLVCKEDYE--------TAKQND----------DSEAGAKRPRTTITAKQLET 171
Query: 122 FKSSFEVSPKPCRKV 136
K++++ SPKP R V
Sbjct: 172 LKNAYKNSPKPARHV 186
>sp|P20271|HM14_CAEEL Homeobox protein ceh-14 OS=Caenorhabditis elegans GN=ceh-14 PE=2
SV=3
Length = 351
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 10 CHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRS-- 67
C ++ +G KC+ C + ++P +V +A +HVYH+ CF C IC + L+ GE+F L +
Sbjct: 95 CRAHFYKKFGTKCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADD 154
Query: 68 GQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQFKSSFE 127
+L C+ D+E+ D++C +G KRPRT +++ K +++
Sbjct: 155 ARLVCKDDYEQAR--------------DKHCNELEGDGSNKRPRTTISAKSLETLKQAYQ 200
Query: 128 VSPKPCRKVS----------------TMNSKRAKNI-LTPNQRRQFKSSFEI---SSMPC 167
S KP R V ++RAK L + R++KSS S+ P
Sbjct: 201 TSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSNRAESDSNSPI 260
Query: 168 RKV-GVHGHYLSLGMSLQDSSDSIFASSTKPLNPNHPY 204
+ G +YL L + D ++S + ++ P+ Y
Sbjct: 261 ESINGQSPNYLYLDHPMDDGNESNYLFHSREQTPDKYY 298
>sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 OS=Xenopus laevis GN=lhx3 PE=1 SV=1
Length = 395
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KCA C + P ++V RAQ VYHL CF C++C + L G++
Sbjct: 68 SRGDSVYCKDDFFKRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDE 127
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 128 FYLMEDSRLVCKADY-------------------ETAKQREAESTAKRPRTTITAKQLET 168
Query: 122 FKSSFEVSPKPCRKV 136
K+++ SPKP R V
Sbjct: 169 LKNAYNNSPKPARHV 183
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KCA C + P ++V RAQ VYHL CF CV+C + L G++
Sbjct: 71 SRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDE 130
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 131 FYLMEDSRLVCKADY-------------------ETAKQREAEATAKRPRTTITAKQLET 171
Query: 122 FKSSFEVSPKPCRKV 136
KS++ SPKP R V
Sbjct: 172 LKSAYNTSPKPARHV 186
>sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 OS=Mus musculus GN=Lhx3 PE=1 SV=1
Length = 400
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KCA C + P ++V RAQ VYHL CF CV+C + L G++
Sbjct: 74 SRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDE 133
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 134 FYLMEDSRLVCKADY-------------------ETAKQREAEATAKRPRTTITAKQLET 174
Query: 122 FKSSFEVSPKPCRKV 136
KS++ SPKP R V
Sbjct: 175 LKSAYNTSPKPARHV 189
>sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 OS=Gallus gallus GN=LHX3 PE=2 SV=1
Length = 395
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S V C F+ +G KCA C + P ++V RAQ VYHL CF C++C + L G++
Sbjct: 68 SRGDGVYCKEDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDE 127
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 128 FYLMEDSRLVCKADY-------------------ETAKQREAESTAKRPRTTITAKQLET 168
Query: 122 FKSSFEVSPKPCRKV 136
K+++ SPKP R V
Sbjct: 169 LKNAYNNSPKPARHV 183
>sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa GN=LHX3 PE=2
SV=1
Length = 383
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C F+ +G KCA C + P ++V RAQ VYHL CF CV+C + L G++
Sbjct: 56 SRGESLYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDE 115
Query: 63 F-ILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
F ++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 116 FYLMEDSRLVCKADY-------------------ETAKQREAEATAKRPRTTITAKQLET 156
Query: 122 FKSSFEVSPKPCRKV 136
KS++ SPKP R V
Sbjct: 157 LKSAYNTSPKPARHV 171
>sp|Q90421|LHX3_DANRE LIM/homeobox protein Lhx3 OS=Danio rerio GN=lhx3 PE=2 SV=1
Length = 398
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKG-E 61
S V C F+ +G KCA C + P ++V RAQ VYHL CF C++C + L G E
Sbjct: 68 SRGDSVYCKDDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDE 127
Query: 62 QFILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRTILTSAQRRQ 121
+++ +L C+ D+ E + R+ KRPRT +T+ Q
Sbjct: 128 YYLMEDSRLVCKADY-------------------ETAKQREADSTAKRPRTTITAKQLET 168
Query: 122 FKSSFEVSPKPCRKV 136
K+++ SPKP R V
Sbjct: 169 LKNAYNNSPKPARHV 183
>sp|P53405|ISL1_DANRE Insulin gene enhancer protein isl-1 OS=Danio rerio GN=isl1 PE=2
SV=1
Length = 349
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA+S VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E M P + L P R+ RP RT+L
Sbjct: 132 DHDVVERATMGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYNANPRP 206
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|Q90476|LHX1_DANRE LIM/homeobox protein Lhx1 OS=Danio rerio GN=lhx1a PE=2 SV=1
Length = 405
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P+++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRRFGTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF-----EKEMYLMQQSSPSD--------DMMLDE------------ 96
+I+ + C+ D+ K+ L+ ++ SD D + D+
Sbjct: 104 LYIIDENKFVCKDDYLSNTNGKDSNLLSVTACSDPSLSPDSQDQLQDDVKDAEIANLSDK 163
Query: 97 ---NCRPRDGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
N D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 ETGNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVI 223
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 QVWFQNRRSKERRMKQLSALGARR 247
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 20 VKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
V CA C +R + ++ +H+ C C C L E+ R G+L+C+ DF
Sbjct: 2 VHCAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
>sp|P63007|LHX1_RAT LIM/homeobox protein Lhx1 OS=Rattus norvegicus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|P63006|LHX1_MOUSE LIM/homeobox protein Lhx1 OS=Mus musculus GN=Lhx1 PE=1 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|P63008|LHX1_MESAU LIM/homeobox protein Lhx1 OS=Mesocricetus auratus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|P48742|LHX1_HUMAN LIM/homeobox protein Lhx1 OS=Homo sapiens GN=LHX1 PE=1 SV=2
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis
GN=LHX1 PE=2 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|Q5IS44|LHX1_PANTR LIM/homeobox protein Lhx1 OS=Pan troglodytes GN=LHX1 PE=2 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|P29674|LHX1_XENLA LIM/homeobox protein Lhx1 OS=Xenopus laevis GN=lhx1 PE=1 SV=1
Length = 403
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF--------EKEMYLMQQSSPS----------DDMMLDENCRPRDG 103
+I+ + C++D+ E + S PS DD E+ D
Sbjct: 104 LYIIDENKFVCKEDYLNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDK 163
Query: 104 RR----------GPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 EAGINENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVI 223
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 QVWFQNRRSKERRMKQLSALGARR 247
>sp|P53411|LHX1_CHICK LIM/homeobox protein Lhx1 OS=Gallus gallus GN=LHX1 PE=2 SV=1
Length = 406
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 44 SREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 63 -FILRSGQLFCRQDF------EKEMYLMQQSSPSDDMMLDENCRPR-------------- 101
+I+ + C++D+ KE L ++ SD + ++ P
Sbjct: 104 LYIIDENKFVCKEDYLNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSD 163
Query: 102 ---------DGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRA 144
D G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 164 KETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRV 223
Query: 145 KNILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 224 IQVWFQNRRSKERRMKQLSALGARR 248
>sp|P61374|ISL1_RAT Insulin gene enhancer protein ISL-1 OS=Rattus norvegicus GN=Isl1
PE=2 SV=1
Length = 349
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA+S VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E + P + L P R+ RP RT+L
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYAANPRP 206
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|P61372|ISL1_MOUSE Insulin gene enhancer protein ISL-1 OS=Mus musculus GN=Isl1 PE=1
SV=1
Length = 349
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA+S VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E + P + L P R+ RP RT+L
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYAANPRP 206
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|P61373|ISL1_MESAU Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus GN=ISL1
PE=2 SV=1
Length = 349
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA+S VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E + P + L P R+ RP RT+L
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYAANPRP 206
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|P61371|ISL1_HUMAN Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1
SV=1
Length = 349
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA+S VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E + P + L P R+ RP RT+L
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYAANPRP 206
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|P50211|ISL1_CHICK Insulin gene enhancer protein ISL-1 OS=Gallus gallus GN=ISL1 PE=2
SV=1
Length = 349
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RLYG+KCA+C ++ VMRA++ VYH+ CF CV C + L G++F LR LFCR
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 75 DFE-KEMYLMQQSSPSDDMM----LDENCRPRDGRRGPKRP------------RTILTSA 117
D + E + P + L P R+ RP RT+L
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 192 QLHTLRTCYAANPRP 206
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 12 PRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLF 71
P+ RL + C CG+++ ++ + +H C C C Q L + +R G+ +
Sbjct: 8 PKKKRLISL-CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTY 66
Query: 72 CRQDF 76
C++D+
Sbjct: 67 CKRDY 71
>sp|Q9R1R0|LHX6_MOUSE LIM/homeobox protein Lhx6 OS=Mus musculus GN=Lhx6 PE=1 SV=2
Length = 363
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 5 NSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFI 64
N + C F +G KCARCG ++ + V RA+ + YHL CF C C + L GE+F
Sbjct: 114 NKEIYCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFG 173
Query: 65 LRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGP---KRPRTILTSAQRRQ 121
L ++ CR ++ + +++++ + + + E P + P KR RT T+ Q +
Sbjct: 174 LVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQV 233
Query: 122 FKSSFEVSPKP----CRKVSTMN--SKRAKNILTPNQRRQFK 157
++ F P +K++ M S+R + N R + K
Sbjct: 234 MQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHK 275
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/55 (20%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
C+ CG +L +++ + ++H+ C C +C L++ +++ +++C+ D+
Sbjct: 70 CSSCGLEIL-DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIYCKMDY 123
>sp|Q9H2C1|LHX5_HUMAN LIM/homeobox protein Lhx5 OS=Homo sapiens GN=LHX5 PE=2 SV=1
Length = 402
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V +A+S V+HL CF C++C + L GE+
Sbjct: 45 SREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEE 104
Query: 63 -FILRSGQLFCRQDF-----EKEMYLMQQSSPSD--------DMMLDE------------ 96
+++ + C+ D+ KE L SS +D D + D+
Sbjct: 105 LYVIDENKFVCKDDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDK 164
Query: 97 ---NCRPRDGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
N + G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 165 ETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVI 224
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 225 QVWFQNRRSKERRMKQLSALGARR 248
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 20 VKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
V CA C +R + ++ +H+ C C C L E+ R G+L+C+ DF
Sbjct: 3 VHCAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>sp|Q9UPM6|LHX6_HUMAN LIM/homeobox protein Lhx6 OS=Homo sapiens GN=LHX6 PE=2 SV=2
Length = 363
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 5 NSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFI 64
N + C F +G KCARCG ++ + V RA+ + YHL CF C C + L GE+F
Sbjct: 114 NKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFG 173
Query: 65 LRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGP---KRPRTILTSAQRRQ 121
L ++ CR ++ + +++++ + + + E P + P KR RT T+ Q +
Sbjct: 174 LVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQV 233
Query: 122 FKSSFEVSPKP----CRKVSTMN--SKRAKNILTPNQRRQFK 157
++ F P +K++ M S+R + N R + K
Sbjct: 234 MQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHK 275
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/55 (21%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
C+ CG +L +++ + ++H+ C C +C L++ +++ ++FC+ D+
Sbjct: 70 CSSCGLEIL-DRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDY 123
>sp|P61376|LHX5_RAT LIM/homeobox protein Lhx5 OS=Rattus norvegicus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V +A+S V+HL CF C++C + L GE+
Sbjct: 45 SREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEE 104
Query: 63 -FILRSGQLFCRQDF-----EKEMYLMQQSSPSD--------DMMLDE------------ 96
+++ + C+ D+ KE L SS +D D + D+
Sbjct: 105 LYVIDENKFVCKDDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDK 164
Query: 97 ---NCRPRDGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
N + G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 165 ETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVI 224
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 225 QVWFQNRRSKERRMKQLSALGARR 248
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 20 VKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
V CA C +R + ++ +H+ C C C L E+ R G+L+C+ DF
Sbjct: 3 VHCAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>sp|P61375|LHX5_MOUSE LIM/homeobox protein Lhx5 OS=Mus musculus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V +A+S V+HL CF C++C + L GE+
Sbjct: 45 SREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEE 104
Query: 63 -FILRSGQLFCRQDF-----EKEMYLMQQSSPSD--------DMMLDE------------ 96
+++ + C+ D+ KE L SS +D D + D+
Sbjct: 105 LYVIDENKFVCKDDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDK 164
Query: 97 ---NCRPRDGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
N + G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 165 ETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVI 224
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 225 QVWFQNRRSKERRMKQLSALGARR 248
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 20 VKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
V CA C +R + ++ +H+ C C C L E+ R G+L+C+ DF
Sbjct: 3 VHCAGC-ERPILDRFLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>sp|P37137|LHX5_XENLA LIM/homeobox protein Lhx5 OS=Xenopus laevis GN=lhx5 PE=1 SV=2
Length = 402
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 37/204 (18%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + C FR +G KCA C + P ++V +A++ V+HL CF C++C + L GE+
Sbjct: 45 SREGKLYCKTDFFRRFGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEE 104
Query: 63 -FILRSGQLFCRQDF-----EKEMYLMQQSSPSD--------DMMLDE------------ 96
+I+ + C++D+ KE L SS +D D + DE
Sbjct: 105 LYIIDENKFVCKEDYISASSLKESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDK 164
Query: 97 ---NCRPRDGRRGPKR--PRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSKRAK 145
N + G KR PRT + + Q K++F +PKP R + T + R
Sbjct: 165 ETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVI 224
Query: 146 NILTPNQRRQFKSSFEISSMPCRK 169
+ N+R + + ++S++ R+
Sbjct: 225 QVWFQNRRSKERRMKQLSALGARR 248
>sp|P52889|LHX5_DANRE LIM/homeobox protein Lhx5 OS=Danio rerio GN=lhx5 PE=2 SV=1
Length = 399
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 43/207 (20%)
Query: 3 SHNSHVSCHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQ 62
S + + C FR +G KCA C + P ++V RA+S V+HL CF C++C + L GE+
Sbjct: 45 SRDGKLYCKIDFFRRFGTKCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEE 104
Query: 63 -FILRSGQLFCRQDFE-----KEMYLMQQSSPSDDMM-------LDENCRPRDG------ 103
+++ + C++D+ KE+ L SS +D + + ++ + D
Sbjct: 105 LYVIDENKFVCKEDYLSASAIKEVNLNSVSSCTDRSLSPDLPDQIQDDTKETDNSTSSDK 164
Query: 104 ---------------RRGPKRPRTILTSAQRRQFKSSFEVSPKPCRKV------STMNSK 142
RRG PRT + + Q K++F +PKP R + T +
Sbjct: 165 DTNNNENEEQNSCTKRRG---PRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNM 221
Query: 143 RAKNILTPNQRRQFKSSFEISSMPCRK 169
R + N+R + + ++S++ R+
Sbjct: 222 RVIQVWFQNRRSKERRMKQLSALGARR 248
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA C ++VMRA+ +VYH+ CF C +C + L G++F LR +L CR
Sbjct: 82 VRLFGIKCANCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRA 141
Query: 75 DFEKEMYLMQQSSPSDDMMLDEN----CRPRDGRRGP------------KRPRTILTSAQ 118
D M SP ++ P R+ P R RT+L Q
Sbjct: 142 DHGLLMEQASAGSPLSPGIIHSRSLHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQ 201
Query: 119 RRQFKSSFEVSPKP 132
++ + +P+P
Sbjct: 202 LHTLRTCYNANPRP 215
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEK 78
C CG ++ ++ A +H C C C Q L + +R G+ +C++D+ +
Sbjct: 27 CVGCGSQIHDQYILRVAPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 10 CHPRGFRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQ 69
C RL+G+KCA+C ++VMRA+ +VYH+ CF C +C + L G++F LR +
Sbjct: 77 CKRDYVRLFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEE 136
Query: 70 LFCRQDFEKEMYLMQQSSPSDDMMLDEN------CRPRDGR-----------RGPKRPRT 112
L CR D M SP + N P R R RT
Sbjct: 137 LLCRADHSLLMERTSAGSPISPGHIHSNRSLHLAAEPVTVRAPHRNHVHKQSEKTTRVRT 196
Query: 113 ILTSAQRRQFKSSFEVSPKP 132
+L Q ++ + +P+P
Sbjct: 197 VLNEKQLHTLRTCYNANPRP 216
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 27/57 (47%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEK 78
C CG ++ ++ + +H C C C Q L + +R G+ +C++D+ +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|P53410|ISL2_CHICK Insulin gene enhancer protein ISL-2 (Fragment) OS=Gallus gallus
GN=ISL2 PE=2 SV=1
Length = 319
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 16 RLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQD 75
RL+G+KCA+C ++VMRA+ HVYHL CF C C + L G+QF LR L CR D
Sbjct: 46 RLFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRAD 105
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 43 YHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
+H+ C C C QPL + LR G+ +C++D+
Sbjct: 11 WHVACLKCAECGQPLDETCTCFLRDGKAYCKRDY 44
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA+C ++VMRA+ +VYH+ CF C +C + L G++F LR +L CR
Sbjct: 64 VRLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRA 123
Query: 75 DFEKEMYLMQQSSP-SDDMMLDEN---CRPRDGRRGP------------KRPRTILTSAQ 118
D + SP S +L + P R+ P R RT+L Q
Sbjct: 124 DHGLLLERASAGSPISPGNILSRSFHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQ 183
Query: 119 RRQFKSSFEVSPKP 132
++ + +P+P
Sbjct: 184 LHTLRTCYNANPRP 197
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEK 78
C CG ++ ++ A +H C C C Q L + +R G+ +C++D+ +
Sbjct: 9 CVGCGSQIHDQYILRVAPDLEWHAACLKCSECSQYLDETCTCFVRDGKTYCKRDYVR 65
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA+C ++VMRA+ +VYH+ CF C +C + L G++F LR +L CR
Sbjct: 82 VRLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRA 141
Query: 75 DFEKEMYLMQQSSP--------SDDMMLDENCRPRDGRRGP------------KRPRTIL 114
D M SP S + + E P R+ P R RT+L
Sbjct: 142 DHGLLMERASAGSPISPGNIHSSRPLHIPE---PVPVRQPPHRNHVHKQSEKTTRVRTVL 198
Query: 115 TSAQRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 199 NEKQLHTLRTCYNANPRP 216
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDF 76
C CG ++ ++ + +H C C C Q L + +R G+ +C++D+
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>sp|O35652|LHX8_MOUSE LIM/homeobox protein Lhx8 OS=Mus musculus GN=Lhx8 PE=2 SV=4
Length = 367
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 39/174 (22%)
Query: 2 TSHNSHVSCHPRG---------FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVI 52
TS H SC+ + FR YG +C+RCG + + V RA+ +VYHL CF C
Sbjct: 128 TSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFS 187
Query: 53 CCQPLQKGEQFILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRT 112
C + L GE+F L ++ CR F D MLD R + G
Sbjct: 188 CKRQLSTGEEFALVEEKVLCRVHF--------------DCMLDNLKREVENGNGISVEGA 233
Query: 113 ILTSAQRRQFKSSFEVSPKPCRKVSTMNSKRAKNILTPNQRRQFKSSFEISSMP 166
+LT PKP +KRA+ T +Q + ++ F + P
Sbjct: 234 LLTEQDVNH--------PKP--------AKRARTSFTADQLQVMQAQFAQDNNP 271
>sp|Q68G74|LHX8_HUMAN LIM/homeobox protein Lhx8 OS=Homo sapiens GN=LHX8 PE=2 SV=2
Length = 356
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 39/174 (22%)
Query: 2 TSHNSHVSCHPRG---------FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVI 52
TS H SC+ + FR YG +C+RCG + + V RA+ +VYHL CF C
Sbjct: 107 TSLGRHTSCYIKDKDIFCKLDYFRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFS 166
Query: 53 CCQPLQKGEQFILRSGQLFCRQDFEKEMYLMQQSSPSDDMMLDENCRPRDGRRGPKRPRT 112
C + L GE+F L ++ CR + D MLD R + G
Sbjct: 167 CKRQLSTGEEFALVEEKVLCRVHY--------------DCMLDNLKREVENGNGISVEGA 212
Query: 113 ILTSAQRRQFKSSFEVSPKPCRKVSTMNSKRAKNILTPNQRRQFKSSFEISSMP 166
+LT PKP +KRA+ T +Q + ++ F + P
Sbjct: 213 LLTEQDVNH--------PKP--------AKRARTSFTADQLQVMQAQFAQDNNP 250
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA+C ++VMRA+ VYH+ CF C +C + L G++F LR +L CR
Sbjct: 82 VRLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRA 141
Query: 75 DFEKEMYLMQQSSPSDDMML---------------DENCRPRDGRRGPK--RPRTILTSA 117
D + SP L RP ++ K R RT+L
Sbjct: 142 DHGLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEK 201
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 202 QLHTLRTCYAANPRP 216
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA+C ++VMRA+ VYH+ CF C +C + L G++F +R +L CR
Sbjct: 82 VRLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRA 141
Query: 75 DFEKEMYLMQQSSPSD-----DMMLDENCRPRDGRRGP------------KRPRTILTSA 117
D + SP L P R+ P R RT+L
Sbjct: 142 DHGLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEK 201
Query: 118 QRRQFKSSFEVSPKP 132
Q ++ + +P+P
Sbjct: 202 QLHTLRTCYNANPRP 216
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 22 CARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQDFEK 78
C CG ++ ++ + +H C CV C Q L + +R G+ +C++D+ +
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDYVR 83
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 15 FRLYGVKCARCGDRLLPHEMVMRAQSHVYHLPCFVCVICCQPLQKGEQFILRSGQLFCRQ 74
RL+G+KCA+C ++VMRA+ VYH+ CF C +C + L G++F LR +L CR
Sbjct: 82 VRLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRA 141
Query: 75 D 75
D
Sbjct: 142 D 142
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,203,576
Number of Sequences: 539616
Number of extensions: 3956580
Number of successful extensions: 12706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 12035
Number of HSP's gapped (non-prelim): 749
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)