Your job contains 1 sequence.
>psy10851
MPQYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQR
AKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSS
SVLKIGYELGFFIQEEEEEEEEEEEEEEEEEEEEEEEEV
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10851
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036274 - symbol:CG4328 species:7227 "Drosophila m... 188 7.7e-14 1
FB|FBgn0052105 - symbol:CG32105 species:7227 "Drosophila ... 186 1.7e-13 1
UNIPROTKB|F1S229 - symbol:LMX1A "Uncharacterized protein"... 159 2.5e-11 1
UNIPROTKB|E1C2D6 - symbol:E1C2D6 "Uncharacterized protein... 162 2.5e-11 1
UNIPROTKB|I3L863 - symbol:LMX1A "Uncharacterized protein"... 159 2.5e-11 1
UNIPROTKB|H9L043 - symbol:H9L043 "Uncharacterized protein... 156 4.4e-11 1
UNIPROTKB|F1MC25 - symbol:LMX1A "Uncharacterized protein"... 159 5.2e-11 1
UNIPROTKB|F1PDJ1 - symbol:LMX1A "Uncharacterized protein"... 159 5.2e-11 1
UNIPROTKB|Q8TE12 - symbol:LMX1A "LIM homeobox transcripti... 159 5.2e-11 1
MGI|MGI:1888519 - symbol:Lmx1a "LIM homeobox transcriptio... 159 5.2e-11 1
RGD|1304784 - symbol:Lmx1a "LIM homeobox transcription fa... 159 5.2e-11 1
UNIPROTKB|F1N4F7 - symbol:LMX1B "Uncharacterized protein"... 154 9.0e-11 1
UNIPROTKB|F1RS26 - symbol:LMX1B "Uncharacterized protein"... 154 9.0e-11 1
ZFIN|ZDB-GENE-041014-332 - symbol:lmx1a "LIM homeobox tra... 156 1.0e-10 1
UNIPROTKB|J9NU69 - symbol:LMX1B "Uncharacterized protein"... 154 1.3e-10 1
ZFIN|ZDB-GENE-050114-2 - symbol:lmx1bb "LIM homeobox tran... 155 1.4e-10 1
MGI|MGI:1100513 - symbol:Lmx1b "LIM homeobox transcriptio... 154 1.7e-10 1
UNIPROTKB|G3V877 - symbol:Lmx1b "LIM homeobox transcripti... 154 1.7e-10 1
ZFIN|ZDB-GENE-050114-3 - symbol:lmx1ba "LIM homeobox tran... 154 1.8e-10 1
UNIPROTKB|F1NDZ5 - symbol:LMX1B "LIM/homeobox protein LMX... 154 1.8e-10 1
UNIPROTKB|P53413 - symbol:LMX1B "LIM/homeobox protein LMX... 154 1.8e-10 1
UNIPROTKB|O60663 - symbol:LMX1B "LIM homeobox transcripti... 154 1.8e-10 1
UNIPROTKB|B7ZLH2 - symbol:LMX1B "LMX1B protein" species:9... 154 1.8e-10 1
UNIPROTKB|F8VYP0 - symbol:LMX1B "LIM homeobox transcripti... 154 2.0e-10 1
UNIPROTKB|F8W7W6 - symbol:LMX1B "LIM homeobox transcripti... 154 2.1e-10 1
WB|WBGene00002988 - symbol:lim-6 species:6239 "Caenorhabd... 151 2.4e-10 1
UNIPROTKB|Q8UVR3 - symbol:lmx1b.1 "LIM homeobox transcrip... 150 5.5e-10 1
FB|FBgn0026411 - symbol:Lim1 species:7227 "Drosophila mel... 133 5.8e-08 1
UNIPROTKB|F1M4Q6 - symbol:Zfhx3 "Protein Zfhx3" species:1... 109 9.9e-08 2
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 128 1.2e-07 1
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 130 1.3e-07 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 128 1.3e-07 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 127 1.7e-07 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 127 1.7e-07 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 127 1.7e-07 1
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 126 2.2e-07 1
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 126 2.3e-07 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 126 2.3e-07 1
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 126 2.3e-07 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 121 2.4e-07 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 125 2.7e-07 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 125 2.8e-07 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 125 2.9e-07 1
RGD|1560268 - symbol:Zfhx3 "zinc finger homeobox 3" speci... 109 3.2e-07 2
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 124 3.6e-07 1
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 124 3.7e-07 1
WB|WBGene00000438 - symbol:ceh-14 species:6239 "Caenorhab... 122 4.8e-07 1
UNIPROTKB|P20271 - symbol:ceh-14 "Homeobox protein ceh-14... 122 4.8e-07 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 117 4.9e-07 1
ZFIN|ZDB-GENE-070330-1 - symbol:drgx "dorsal root ganglia... 118 8.8e-07 1
MGI|MGI:99948 - symbol:Zfhx3 "zinc finger homeobox 3" spe... 109 8.9e-07 2
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 118 1.6e-06 1
UNIPROTKB|F1N9J8 - symbol:DMBX1 "Uncharacterized protein"... 116 1.6e-06 1
UNIPROTKB|Q6PVU4 - symbol:Q6PVU4 "Lim1" species:9986 "Ory... 117 1.7e-06 1
UNIPROTKB|F1RKD0 - symbol:LHX5 "Uncharacterized protein" ... 117 2.1e-06 1
UNIPROTKB|E1BQX0 - symbol:LHX5 "Uncharacterized protein" ... 117 2.1e-06 1
UNIPROTKB|A6QQY6 - symbol:LHX5 "Uncharacterized protein" ... 117 2.1e-06 1
UNIPROTKB|E2RRP3 - symbol:LHX5 "Uncharacterized protein" ... 117 2.1e-06 1
UNIPROTKB|Q9H2C1 - symbol:LHX5 "LIM/homeobox protein Lhx5... 117 2.1e-06 1
MGI|MGI:107792 - symbol:Lhx5 "LIM homeobox protein 5" spe... 117 2.1e-06 1
RGD|71079 - symbol:Lhx5 "LIM homeobox 5" species:10116 "R... 117 2.1e-06 1
ZFIN|ZDB-GENE-980526-116 - symbol:lhx1b "LIM homeobox 1b"... 117 2.1e-06 1
UNIPROTKB|B7ZP59 - symbol:lhx1 "Homeobox protein" species... 117 2.2e-06 1
UNIPROTKB|P29674 - symbol:lhx1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|Q5ISK2 - symbol:Q5ISK2 "LIM homeobox protein 1"... 117 2.2e-06 1
ZFIN|ZDB-GENE-980526-347 - symbol:lhx1a "LIM homeobox 1a"... 117 2.2e-06 1
UNIPROTKB|F1NX79 - symbol:LHX1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|P53411 - symbol:LHX1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|A7Z015 - symbol:LHX1 "Uncharacterized protein" ... 117 2.2e-06 1
UNIPROTKB|E2RMA8 - symbol:LHX1 "Uncharacterized protein" ... 117 2.2e-06 1
UNIPROTKB|P48742 - symbol:LHX1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|F2Z531 - symbol:LHX1 "Uncharacterized protein" ... 117 2.2e-06 1
UNIPROTKB|P63008 - symbol:Lhx1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|Q5IS44 - symbol:LHX1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
UNIPROTKB|Q5IS89 - symbol:LHX1 "LIM/homeobox protein Lhx1... 117 2.2e-06 1
MGI|MGI:99783 - symbol:Lhx1 "LIM homeobox protein 1" spec... 117 2.2e-06 1
RGD|71074 - symbol:Lhx1 "LIM homeobox 1" species:10116 "R... 117 2.2e-06 1
UNIPROTKB|F1NEA7 - symbol:DMBX1 "Uncharacterized protein"... 116 2.4e-06 1
ZFIN|ZDB-GENE-050309-237 - symbol:si:ch73-386h18.1 "si:ch... 126 2.7e-06 1
UNIPROTKB|Q03014 - symbol:HHEX "Hematopoietically-express... 112 3.5e-06 1
RGD|628759 - symbol:Prop1 "PROP paired-like homeobox 1" s... 110 3.6e-06 1
UNIPROTKB|E9PTF1 - symbol:Prop1 "Protein Prop1" species:1... 110 3.6e-06 1
WB|WBGene00003000 - symbol:lin-11 species:6239 "Caenorhab... 115 3.6e-06 1
UNIPROTKB|E1BYW7 - symbol:DRGX "Uncharacterized protein" ... 111 4.2e-06 1
UNIPROTKB|J3QQ66 - symbol:ZFHX4 "Zinc finger homeobox pro... 103 4.3e-06 2
UNIPROTKB|Q86UP3 - symbol:ZFHX4 "Zinc finger homeobox pro... 103 4.3e-06 2
UNIPROTKB|E7EVZ1 - symbol:ZFHX4 "Zinc finger homeobox pro... 103 4.3e-06 2
UNIPROTKB|G3V138 - symbol:ZFHX4 "Zinc finger homeodomain ... 103 4.4e-06 2
ZFIN|ZDB-GENE-980526-484 - symbol:lhx5 "LIM homeobox 5" s... 114 4.5e-06 1
UNIPROTKB|P37137 - symbol:lhx5 "LIM/homeobox protein Lhx5... 114 4.5e-06 1
WB|WBGene00002987 - symbol:lim-4 species:6239 "Caenorhabd... 113 4.7e-06 1
UNIPROTKB|O75360 - symbol:PROP1 "Homeobox protein prophet... 108 6.3e-06 1
UNIPROTKB|F1PS13 - symbol:CDX4 "Uncharacterized protein" ... 110 6.5e-06 1
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 99 6.9e-06 2
MGI|MGI:96086 - symbol:Hhex "hematopoietically expressed ... 109 7.7e-06 1
ZFIN|ZDB-GENE-990415-133 - symbol:isl2b "islet2b" species... 111 7.9e-06 1
UNIPROTKB|Q8MJI9 - symbol:PROP1 "Homeobox protein prophet... 107 8.1e-06 1
UNIPROTKB|Q9TTD8 - symbol:PROP1 "Homeobox protein prophet... 107 8.1e-06 1
UNIPROTKB|Q9GLL9 - symbol:PROP1 "Homeobox protein prophet... 107 8.1e-06 1
MGI|MGI:109330 - symbol:Prop1 "paired like homeodomain fa... 106 1.0e-05 1
WARNING: Descriptions of 117 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0036274 [details] [associations]
symbol:CG4328 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048813
GeneTree:ENSGT00700000104050 EMBL:BT050501 RefSeq:NP_648567.2
UniGene:Dm.27132 SMR:Q9VTW3 IntAct:Q9VTW3 MINT:MINT-301655
EnsemblMetazoa:FBtr0301071 GeneID:39405 KEGG:dme:Dmel_CG4328
UCSC:CG4328-RA FlyBase:FBgn0036274 InParanoid:Q9VTW3 OMA:ETNKENC
OrthoDB:EOG4B8GVN GenomeRNAi:39405 NextBio:813480 Uniprot:Q9VTW3
Length = 544
Score = 188 (71.2 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 42/73 (57%), Positives = 52/73 (71%)
Query: 36 QVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSL-DKEDSEPH------- 87
+VRE LAKDTGLS+R+VQVWFQNQRAK+KKIQ+KAKQ+ K D +DS+
Sbjct: 369 KVRENLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQEPPSKGASDSQDSQESLDSSLAT 428
Query: 88 -IKQEPHSEGESE 99
IK E HS+ ES+
Sbjct: 429 KIKDEAHSDSESQ 441
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 186 (70.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 43/66 (65%), Positives = 48/66 (72%)
Query: 10 QTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
+TI + + K SF+ P +VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK
Sbjct: 428 RTILTSQQRKQFKASFDQS-P-KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 485
Query: 70 AKQQEG 75
AKQ G
Sbjct: 486 AKQNGG 491
>UNIPROTKB|F1S229 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CU179728
Ensembl:ENSSSCT00000006937 Uniprot:F1S229
Length = 295
Score = 159 (61.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 112 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 168
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 169 RQQQQQQDQ 177
>UNIPROTKB|E1C2D6 [details] [associations]
symbol:E1C2D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001558 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
EMBL:AADN02034025 EMBL:AADN02034026 EMBL:AADN02034027
EMBL:AADN02034028 EMBL:AADN02034029 IPI:IPI00590021
Ensembl:ENSGALT00000005411 OMA:XKSDDEE Uniprot:E1C2D6
Length = 386
Score = 162 (62.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 41/88 (46%), Positives = 55/88 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 204 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 260
Query: 69 KAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+ +QQ+ D+ ++++ +P+S G
Sbjct: 261 RQQQQQQDQ----QNTQRLSSAQPNSSG 284
>UNIPROTKB|I3L863 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 OMA:GNAGMEG EMBL:CU179728 Ensembl:ENSSSCT00000032564
Uniprot:I3L863
Length = 296
Score = 159 (61.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 112 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 168
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 169 RQQQQQQDQ 177
>UNIPROTKB|H9L043 [details] [associations]
symbol:H9L043 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02053375
Ensembl:ENSGALT00000021923 OMA:CECERRL Uniprot:H9L043
Length = 280
Score = 156 (60.0 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 38/79 (48%), Positives = 48/79 (60%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGL+VRVVQVWFQNQRAKMKKI R
Sbjct: 107 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLTVRVVQVWFQNQRAKMKKIAR 163
Query: 69 KAKQQEGDKSLDKEDSEPH 87
+ +QQ+ + + + H
Sbjct: 164 RQQQQQQQQQEQEHGASVH 182
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 256 RQQQQQQDQ 264
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 256 RQQQQQQDQ 264
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 256 RQQQQQQDQ 264
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 256 RQQQQQQDQ 264
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 159 (61.0 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDK 77
+ +QQ+ D+
Sbjct: 256 RQQQQQQDQ 264
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 154 (59.3 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 115 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 171
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 172 RHQQQQEQQNSQRLGQE 188
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 154 (59.3 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 115 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 171
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 172 RHQQQQEQQNSQRLGQE 188
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 47/117 (40%), Positives = 60/117 (51%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 189 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLVR 245
Query: 69 KAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSVLKI 125
+ +QQ+ ++ P + S G V L+ S P + S LK+
Sbjct: 246 RQQQQKQTVCPQEKRESPSQQHTATSCGALP-VELECAGSYPLPQQNLSLDSQSLKL 301
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 155 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 211
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 212 RHQQQQEQQNSQRLGQE 228
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 198 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 254
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 255 RQQQQQEQQNSQRLGQE 271
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 200 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 257 RHQQQQEQQNSQRLGQE 273
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 154 (59.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 200 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 257 RHQQQQEQQNSQRLGQE 273
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 37/66 (56%), Positives = 44/66 (66%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 196 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 252
Query: 69 KAKQQE 74
+ +QQ+
Sbjct: 253 RQQQQQ 258
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 256 RHQQQQEQQNSQRLGQE 272
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 199 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 255
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 256 RHQQQQEQQNSQRLGQE 272
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 200 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 257 RHQQQQEQQNSQRLGQE 273
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 154 (59.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 200 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 256
Query: 69 KAKQQEGDKSLDK-EDSEP 86
+ +QQ+ ++ + EP
Sbjct: 257 RHQQQQEQQNSQRLGQGEP 275
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 223 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 279
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 280 RHQQQQEQQNSQRLGQE 296
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 154 (59.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAKMKK+ R
Sbjct: 223 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKMKKLAR 279
Query: 69 KAKQQEGDKSLDK-EDSEP 86
+ +QQ+ ++ + EP
Sbjct: 280 RHQQQQEQQNSQRLGQGEP 298
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 151 (58.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/91 (43%), Positives = 51/91 (56%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + + KT+F S P K VRE LA +TGLSVRVVQVWFQNQRAK+KK+ +
Sbjct: 190 RTILNAQQRRQFKTAFERSSKPSRK---VREQLANETGLSVRVVQVWFQNQRAKIKKLNK 246
Query: 69 KAKQQEGDKSLDKEDSEPHIKQEPHSEGESE 99
K GD SE ++ S + E
Sbjct: 247 K-DSDSGDTFKHGPGSEGRSTEDIRSSDDEE 276
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 150 (57.9 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 10 QTIRLLNLKVKLKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
+TI + K SF S P K VRE LA +TGLSVRVVQVWFQNQRAK+KK+ R
Sbjct: 222 RTILTTQQRRAFKASFEVSSKPCRK---VRETLAAETGLSVRVVQVWFQNQRAKIKKLAR 278
Query: 69 KAKQQEGDKSLDKEDSE 85
+ +QQ+ ++ + E
Sbjct: 279 RHQQQQEQQNSQRLGQE 295
>FB|FBgn0026411 [details] [associations]
symbol:Lim1 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005525
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007480 GO:GO:0007479 FlyBase:FBgn0260444
HSSP:P06601 GeneTree:ENSGT00700000104177 eggNOG:NOG257130 KO:K09372
EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 UniGene:Dm.3025
SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:Q9V472
EnsemblMetazoa:FBtr0071279 GeneID:31813 KEGG:dme:Dmel_CG11354
UCSC:CG11354-RA CTD:31813 FlyBase:FBgn0026411 InParanoid:Q9V472
OMA:GARKMRG OrthoDB:EOG48W9H7 GenomeRNAi:31813 NextBio:775444
Uniprot:Q9V472
Length = 505
Score = 133 (51.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+V LKT+FN P T +RE LAK+TGL +RV+QVWFQN+R+K +++++
Sbjct: 253 TIKAKQLEV-LKTAFNQT-P-KPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQ 307
>UNIPROTKB|F1M4Q6 [details] [associations]
symbol:Zfhx3 "Protein Zfhx3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 RGD:1560268 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 IPI:IPI00359640
Ensembl:ENSRNOT00000019408 ArrayExpress:F1M4Q6 Uniprot:F1M4Q6
Length = 2542
Score = 109 (43.4 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 1770 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 1824
Query: 64 KK 65
KK
Sbjct: 1825 KK 1826
Score = 59 (25.8 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 57 QNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDK 116
Q Q + ++ Q+K +QQ+ + ++ +P Q P +G + S D + +SP ++
Sbjct: 2208 QRQLQQQQQQQQKVQQQQQQQQQQQQQQQPKASQTPVPQGPA---SPDKDPAKESPKPEE 2264
Query: 117 KKS 119
+K+
Sbjct: 2265 QKN 2267
Score = 36 (17.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 66 IQRKAKQQEGDKSLDKEDSEPHIKQEP 92
+ ++ K ++G+K +KE + K EP
Sbjct: 2046 LPQQRKDKDGEKGKEKEKAHKG-KGEP 2071
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 142 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 197
Query: 70 A-KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVS 102
A + + G + S KQE S E VS
Sbjct: 198 AGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVS 231
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LKT++N+ P VRE L++DTGL +RVVQVWFQN+RAK K++++ A
Sbjct: 265 TITAKQLET-LKTAYNNS-P-KPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKKDA 321
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 128 (50.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 163 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 218
Query: 70 A-KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVS 102
A + + G + S KQE S E VS
Sbjct: 219 AGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVS 252
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 163 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 218
Query: 70 A-KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVS 102
A + + G + S KQE S E VS
Sbjct: 219 AGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVS 252
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 163 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 218
Query: 70 A-KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVS 102
A + + G + S KQE S E VS
Sbjct: 219 AGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVS 252
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 168 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 223
Query: 70 A-KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVS 102
A + + G + S KQE S E VS
Sbjct: 224 AGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVS 257
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 126 (49.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 163 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 219
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHSEGESE 99
+Q+ G + + S K + S E +
Sbjct: 220 GRQRWGQYFRNMKRSRGGSKSDKDSVQEGQ 249
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 126 (49.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/90 (38%), Positives = 54/90 (60%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 166 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 222
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHS--EGE 97
+Q+ G + + S K + S EG+
Sbjct: 223 GRQRWGQYFRNMKRSRGSSKSDKDSIQEGQ 252
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 126 (49.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/90 (38%), Positives = 54/90 (60%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 166 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 222
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHS--EGE 97
+Q+ G + + S K + S EG+
Sbjct: 223 GRQRWGQYFRNMKRSRGSSKSDKDSIQEGQ 252
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 126 (49.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/90 (38%), Positives = 54/90 (60%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 168 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 224
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHS--EGE 97
+Q+ G + + S K + S EG+
Sbjct: 225 GRQRWGQYFRNMKRSRGSSKSDKDSIQEGQ 254
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 121 (47.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/89 (38%), Positives = 53/89 (59%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK ++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 138 TITAKQLET-LKNAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 193
Query: 70 A-KQQEGD--KSLDKEDSEPHIKQEPHSE 95
A + + G KS+ + +++E +E
Sbjct: 194 AGRHRWGQFYKSVKRSRGAGKLEKESSAE 222
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 125 (49.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 148 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 204
Query: 71 KQQ 73
+Q
Sbjct: 205 GRQ 207
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 125 (49.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK ++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 160 TITAKQLET-LKNAYNNS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 216
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHS 94
+Q+ G + + S + K + S
Sbjct: 217 GRQRWGQYFRNMKRSRGNSKSDKDS 241
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 125 (49.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK+++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 168 TITAKQLET-LKSAYNTS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 224
Query: 71 KQQ 73
+Q
Sbjct: 225 GRQ 227
>RGD|1560268 [details] [associations]
symbol:Zfhx3 "zinc finger homeobox 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0007050 "cell cycle
arrest" evidence=IEP] [GO:0007420 "brain development" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=ISO] [GO:0045664 "regulation of
neuron differentiation" evidence=IEP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1560268 GO:GO:0005525 GO:GO:0005634
GO:GO:0005737 GO:GO:0045664 GO:GO:0007420 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
GO:GO:0007050 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 IPI:IPI00951506
Ensembl:ENSRNOT00000068594 ArrayExpress:F1M547 Uniprot:F1M547
Length = 2537
Score = 109 (43.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 1770 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 1824
Query: 64 KK 65
KK
Sbjct: 1825 KK 1826
Score = 54 (24.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 57 QNQRAKMKKIQRKAKQQEGDKSLDKEDSE-PHIKQEPHSEGESEWVSLDWRSSVQSPVGD 115
Q Q+ + +++Q++ +QQ+ + ++ + P Q P +G + S D + +SP +
Sbjct: 2202 QQQQQQQRQLQQQQQQQQQQQQQQQQQQQQPKASQTPVPQGPA---SPDKDPAKESPKPE 2258
Query: 116 KKKS 119
++K+
Sbjct: 2259 EQKN 2262
Score = 36 (17.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 66 IQRKAKQQEGDKSLDKEDSEPHIKQEP 92
+ ++ K ++G+K +KE + K EP
Sbjct: 2046 LPQQRKDKDGEKGKEKEKAHKG-KGEP 2071
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 124 (48.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK ++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 160 TITAKQLET-LKNAYNNS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDA 216
Query: 71 KQQ 73
+Q
Sbjct: 217 GRQ 219
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 124 (48.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/115 (33%), Positives = 62/115 (53%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKA 70
TI L+ LK ++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++ A
Sbjct: 160 TITAKQLET-LKNAYNNS-P-KPARHVREQLSTETGLDMRVVQVWFQNRRAKEKRLKKDA 216
Query: 71 -KQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSV--QSPVGDKKKSSSV 122
+Q+ G + + S K + S E + + D S + P+ D S+ +
Sbjct: 217 GRQRWGQYFRNMKRSRGTSKSDKDSTQE-DGMDSDAEVSFTDEPPMSDLGHSNGI 270
>WB|WBGene00000438 [details] [associations]
symbol:ceh-14 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040040 "thermosensory behavior" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 122 (48.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIK 89
VRE LA +TGL +RVVQVWFQN+RAK K++++ A ++ + + DS I+
Sbjct: 209 VREQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSNRAESDSNSPIE 261
>UNIPROTKB|P20271 [details] [associations]
symbol:ceh-14 "Homeobox protein ceh-14" species:6239
"Caenorhabditis elegans" [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016048 "detection of
temperature stimulus" evidence=IMP] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 122 (48.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIK 89
VRE LA +TGL +RVVQVWFQN+RAK K++++ A ++ + + DS I+
Sbjct: 209 VREQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSNRAESDSNSPIE 261
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 117 (46.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI L+ LK ++N+ P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 160 TITAKQLET-LKNAYNNS-P-KPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKK 214
>ZFIN|ZDB-GENE-070330-1 [details] [associations]
symbol:drgx "dorsal root ganglia homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070330-1 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG106743
CTD:644168 EMBL:AY753211 IPI:IPI00481333 RefSeq:NP_001032182.1
UniGene:Dr.94366 ProteinModelPortal:Q3BD88 SMR:Q3BD88 STRING:Q3BD88
GeneID:560399 KEGG:dre:560399 InParanoid:Q3BD88 NextBio:20883422
Uniprot:Q3BD88
Length = 287
Score = 118 (46.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEP--HIKQEPHSE 95
RE LA L+ VQVWFQN+RAK +K +R +Q+G K E + P ++ Q P
Sbjct: 72 REELAMKINLTEARVQVWFQNRRAKWRKTERGTSEQDGGKEQMNEGNPPARNLNQSPVDH 131
Query: 96 GESEWVSLDWRSSVQSPVG 114
S+ ++ + ++ VG
Sbjct: 132 SRSKKEPMELQQNINRVVG 150
>MGI|MGI:99948 [details] [associations]
symbol:Zfhx3 "zinc finger homeobox 3" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 MGI:MGI:99948 GO:GO:0005525 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60 GO:GO:0007517
eggNOG:NOG301069 HOGENOM:HOG000155777 HOVERGEN:HBG050606
OrthoDB:EOG4Z0B4P ChiTaRS:ZFHX3 EMBL:D26046 IPI:IPI00119958
UniGene:Mm.416972 UniGene:Mm.477670 ProteinModelPortal:Q61329
SMR:Q61329 IntAct:Q61329 STRING:Q61329 PhosphoSite:Q61329
PRIDE:Q61329 UCSC:uc009nid.1 InParanoid:Q61329 CleanEx:MM_ZFHX3
Genevestigator:Q61329 GermOnline:ENSMUSG00000038872 Uniprot:Q61329
Length = 3726
Score = 109 (43.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 2955 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 3009
Query: 64 KK 65
KK
Sbjct: 3010 KK 3011
Score = 53 (23.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 57 QNQRAKMKKIQRKAKQQEGD-KSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGD 115
Q Q+ + +++Q++ +QQ+ + ++ +P Q P +G + S D + +SP +
Sbjct: 3391 QQQQQQQRQLQQQQQQQQQKVQQQQQQQQQPKASQTPVPQGAA---SPDKDPAKESPKPE 3447
Query: 116 KKKS 119
++K+
Sbjct: 3448 EQKN 3451
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 67 QRKAKQQEGDKSLDKEDSEPHIKQEP 92
Q++ K ++G+K +KE + K EP
Sbjct: 3233 QQQRKDKDGEKGKEKEKAHKG-KGEP 3257
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 118 (46.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 11 TIRLLNLKVKLKTSF-NSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
TI L+ LK+++ NS P VRE L+ +TGL +RVVQVWFQN+RAK K++++
Sbjct: 166 TITAKQLET-LKSAYKNSPKPAR---HVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKD 221
Query: 70 A 70
A
Sbjct: 222 A 222
>UNIPROTKB|F1N9J8 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012643
IPI:IPI00683833 Ensembl:ENSGALT00000016994 Uniprot:F1N9J8
Length = 303
Score = 116 (45.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+RE LA T L VQVWF+N+RAK +K QR ++++ K D E S HSEG
Sbjct: 97 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKDCESS--------HSEG 148
Query: 97 ESEWVSLDWRSSVQSPVGDKKKSSSV 122
++E L+ QS + D +K+ S+
Sbjct: 149 KTEPPVLE----TQSTIPDTEKTQSI 170
>UNIPROTKB|Q6PVU4 [details] [associations]
symbol:Q6PVU4 "Lim1" species:9986 "Oryctolagus cuniculus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 HSSP:P10037
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY575212 UniGene:Ocu.3134
ProteinModelPortal:Q6PVU4 Uniprot:Q6PVU4
Length = 348
Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 128 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 182
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 185 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 239
>UNIPROTKB|E1BQX0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 GO:GO:0021937
OMA:SHQGQEM EMBL:AADN02050410 EMBL:AADN02050411 EMBL:AADN02050412
EMBL:AADN02050413 EMBL:AADN02050414 IPI:IPI00574747
Ensembl:ENSGALT00000013517 NextBio:20921461 Uniprot:E1BQX0
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 184 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 238
>UNIPROTKB|B7ZP59 [details] [associations]
symbol:lhx1 "Homeobox protein" species:8355 "Xenopus
laevis" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0072178 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077
RefSeq:NP_001084128.1 UniGene:Xl.32655 GeneID:399323
KEGG:xla:399323 Xenbase:XB-GENE-856460 EMBL:BC169338 EMBL:BC169340
SMR:B7ZP59 Uniprot:B7ZP59
Length = 403
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 185 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 239
>UNIPROTKB|P29674 [details] [associations]
symbol:lhx1 "LIM/homeobox protein Lhx1" species:8355
"Xenopus laevis" [GO:0003002 "regionalization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009798 "axis specification" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0030903 "notochord
development" evidence=IMP] [GO:0035565 "regulation of pronephros
size" evidence=IGI] [GO:0039003 "pronephric field specification"
evidence=IGI] [GO:0039020 "pronephric nephron tubule development"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043009 "chordate embryonic development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0048793 "pronephros development" evidence=IGI;IMP] [GO:0072080
"nephron tubule development" evidence=IGI] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0022008 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0042074 GO:GO:0009798 GO:GO:0043009
GO:GO:0030903 GO:GO:0039020 GO:GO:0035565 CTD:3975
HOVERGEN:HBG006263 KO:K09372 EMBL:X63889 EMBL:AF013242 PIR:S23802
RefSeq:NP_001084128.1 UniGene:Xl.32655 ProteinModelPortal:P29674
SMR:P29674 GeneID:399323 KEGG:xla:399323 Xenbase:XB-GENE-856460
GO:GO:0039003 Uniprot:P29674
Length = 403
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 185 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 239
>UNIPROTKB|Q5ISK2 [details] [associations]
symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca
fascicularis" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009880 "embryonic pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY650378 ProteinModelPortal:Q5ISK2
Uniprot:Q5ISK2
Length = 403
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 183 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 237
>ZFIN|ZDB-GENE-980526-347 [details] [associations]
symbol:lhx1a "LIM homeobox 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0043234
"protein complex" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0060059 "embryonic
retina morphogenesis in camera-type eye" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072178
"nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive
streak formation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0021871 "forebrain regionalization"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-347 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 EMBL:L37802 IPI:IPI00485723 RefSeq:NP_571291.1
UniGene:Dr.364 ProteinModelPortal:Q90476 SMR:Q90476 STRING:Q90476
Ensembl:ENSDART00000005641 GeneID:30463 KEGG:dre:30463 CTD:30463
InParanoid:Q90476 OMA:PSEMNEG NextBio:20806857 ArrayExpress:Q90476
Bgee:Q90476 Uniprot:Q90476
Length = 405
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 185 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 239
>UNIPROTKB|F1NX79 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001706 "endoderm formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021871 "forebrain
regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0035852 "horizontal cell localization" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0060067 "cervix development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0006366
GO:GO:0090190 GO:GO:0040019 GO:GO:2000768 GO:GO:2000543
GeneTree:ENSGT00700000104177 IPI:IPI00581331 GO:GO:0021937
GO:GO:2000744 OMA:PSEMNEG EMBL:AADN02025742 EMBL:AADN02025743
EMBL:AADN02025744 Ensembl:ENSGALT00000008686 Uniprot:F1NX79
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|P53411 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS;NAS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009948 "anterior/posterior axis specification" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0072049 "comma-shaped body morphogenesis" evidence=ISS]
[GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0021517 "ventral spinal cord development"
evidence=IEP] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0060429 "epithelium
development" evidence=ISS] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEP] [GO:0008045 "motor neuron axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0010468 "regulation
of gene expression" evidence=ISS] [GO:0021527 "spinal cord
association neuron differentiation" evidence=ISS] [GO:0072179
"nephric duct formation" evidence=NAS] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=NAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 EMBL:L35569
IPI:IPI00581331 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789
ProteinModelPortal:P53411 SMR:P53411 STRING:P53411 GeneID:396381
KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 OrthoDB:EOG405S1F
NextBio:20816423 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 Uniprot:P53411
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|A7Z015 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008045 "motor neuron axon guidance" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0021937 "cerebellar
Purkinje cell-granule cell precursor cell signaling involved in
regulation of granule cell precursor cell proliferation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0007267
"cell-cell signaling" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0001702 "gastrulation with
mouth forming second" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=ISS] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0035852 "horizontal cell localization"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0001657
GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537
GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:0048793
GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0001071
GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:DAAA02048434 EMBL:BC153212 IPI:IPI00711186
RefSeq:NP_001098917.1 RefSeq:XP_003583582.1 UniGene:Bt.104440
Ensembl:ENSBTAT00000047689 GeneID:616699 GeneID:786041
KEGG:bta:616699 KEGG:bta:786041 InParanoid:A7Z015 NextBio:20927654
Uniprot:A7Z015
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|E2RMA8 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060429 "epithelium development"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0009880
"embryonic pattern specification" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0040019
"positive regulation of embryonic development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0007267 "cell-cell signaling"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA]
[GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA]
[GO:0048793 "pronephros development" evidence=IEA] [GO:0035852
"horizontal cell localization" evidence=IEA] [GO:0035849 "nephric
duct elongation" evidence=IEA] [GO:0032525 "somite rostral/caudal
axis specification" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190
GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880
GO:GO:0001658 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852 GO:GO:0072283
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:AAEX03006612
RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8
Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649
NextBio:20895890 Uniprot:E2RMA8
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|P48742 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0035502 "metanephric part of
ureteric bud development" evidence=IEA] [GO:0035849 "nephric duct
elongation" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA] [GO:0048793
"pronephros development" evidence=IEA] [GO:0072177 "mesonephric
duct development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072278 "metanephric comma-shaped
body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal
vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric
S-shaped body morphogenesis" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001655 "urogenital system development" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:0072077 "renal vesicle morphogenesis"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0060429 "epithelium development"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG EMBL:U14755 EMBL:AC023315
EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 IPI:IPI00550117
PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727
ProteinModelPortal:P48742 SMR:P48742 STRING:P48742
PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742
DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975
UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770
MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742
PhylomeDB:P48742 GenomeRNAi:3975 NextBio:15580 ArrayExpress:P48742
Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742
GermOnline:ENSG00000132130 GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 Uniprot:P48742
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|F2Z531 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000543 "positive regulation of
gastrulation" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] [GO:0060322 "head
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060067 "cervix development" evidence=IEA]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0035849 "nephric duct elongation"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0045892 GO:GO:0001764 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:CU929499 RefSeq:XP_003131754.1 UniGene:Ssc.22980
ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256
GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|P63008 [details] [associations]
symbol:Lhx1 "LIM/homeobox protein Lhx1" species:10036
"Mesocricetus auratus" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:X81407 PIR:I48186
ProteinModelPortal:P63008 SMR:P63008 Uniprot:P63008
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|Q5IS44 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan
troglodytes" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665284 RefSeq:NP_001029088.1
UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600
KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|Q5IS89 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432
"Saimiri boliviensis boliviensis" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665239 RefSeq:XP_003929119.1
ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157
Uniprot:Q5IS89
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>MGI|MGI:99783 [details] [associations]
symbol:Lhx1 "LIM homeobox protein 1" species:10090 "Mus
musculus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IGI;IMP] [GO:0001655 "urogenital system
development" evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001705 "ectoderm formation" evidence=IGI]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0001822 "kidney development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007267 "cell-cell
signaling" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009880
"embryonic pattern specification" evidence=IGI] [GO:0009948
"anterior/posterior axis specification" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0021527
"spinal cord association neuron differentiation" evidence=IGI]
[GO:0021549 "cerebellum development" evidence=IGI] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IGI]
[GO:0021871 "forebrain regionalization" evidence=IGI] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IMP] [GO:0035846 "oviduct epithelium
development" evidence=IMP] [GO:0035847 "uterine epithelium
development" evidence=IMP] [GO:0035849 "nephric duct elongation"
evidence=IMP] [GO:0035852 "horizontal cell localization"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IGI;IMP] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IMP] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0060065 "uterus development" evidence=IMP] [GO:0060066 "oviduct
development" evidence=IMP] [GO:0060067 "cervix development"
evidence=IMP] [GO:0060068 "vagina development" evidence=IMP]
[GO:0060322 "head development" evidence=IGI] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061205 "paramesonephric
duct development" evidence=IMP] [GO:0072001 "renal system
development" evidence=IGI] [GO:0072049 "comma-shaped body
morphogenesis" evidence=IMP] [GO:0072050 "S-shaped body
morphogenesis" evidence=IMP] [GO:0072077 "renal vesicle
morphogenesis" evidence=IMP] [GO:0072178 "nephric duct
morphogenesis" evidence=IMP] [GO:0090009 "primitive streak
formation" evidence=IMP] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IMP]
[GO:2000543 "positive regulation of gastrulation" evidence=IMP]
[GO:2000744 "positive regulation of anterior head development"
evidence=IMP] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
MGI:MGI:99783 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0021517
GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GO:GO:0072049 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG
GO:GO:0060067 GO:GO:0035852 GO:GO:0072177 GO:GO:0072278
GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846
GO:GO:0035847 EMBL:Z27410 EMBL:S68107 EMBL:AF039706 EMBL:AF039705
IPI:IPI00119516 PIR:I48637 RefSeq:NP_032524.1 UniGene:Mm.4965
ProteinModelPortal:P63006 SMR:P63006 STRING:P63006 PRIDE:P63006
Ensembl:ENSMUST00000018842 GeneID:16869 KEGG:mmu:16869
InParanoid:P63006 NextBio:290830 Bgee:P63006 CleanEx:MM_LHX1
Genevestigator:P63006 GermOnline:ENSMUSG00000018698 Uniprot:P63006
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>RGD|71074 [details] [associations]
symbol:Lhx1 "LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001655 "urogenital system development"
evidence=ISO;ISS] [GO:0001657 "ureteric bud development"
evidence=ISO;ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISO;ISS] [GO:0001705 "ectoderm formation"
evidence=ISO;ISS] [GO:0001706 "endoderm formation" evidence=ISO;ISS]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007267 "cell-cell signaling"
evidence=ISO;ISS] [GO:0007389 "pattern specification process"
evidence=ISO;ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISO;ISS]
[GO:0009791 "post-embryonic development" evidence=ISO;ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISO;ISS]
[GO:0009948 "anterior/posterior axis specification"
evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO;ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO;ISS] [GO:0010468 "regulation of gene
expression" evidence=ISO;ISS] [GO:0010842 "retina layer formation"
evidence=ISO;ISS] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISO;ISS] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=ISO;ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISO;ISS] [GO:0021871 "forebrain
regionalization" evidence=ISO;ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=ISO;ISS]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA;ISO] [GO:0035502 "metanephric part of ureteric bud
development" evidence=IEP] [GO:0035846 "oviduct epithelium
development" evidence=ISO;ISS] [GO:0035847 "uterine epithelium
development" evidence=ISO;ISS] [GO:0035849 "nephric duct elongation"
evidence=IEA;ISO] [GO:0035852 "horizontal cell localization"
evidence=IEA;ISO] [GO:0040019 "positive regulation of embryonic
development" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=ISO;ISS] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISO;ISS] [GO:0048793
"pronephros development" evidence=IEA] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISO;ISS] [GO:0060065
"uterus development" evidence=ISO;ISS] [GO:0060066 "oviduct
development" evidence=ISO;ISS] [GO:0060067 "cervix development"
evidence=ISO;ISS] [GO:0060068 "vagina development" evidence=ISO;ISS]
[GO:0060322 "head development" evidence=ISO;ISS] [GO:0060429
"epithelium development" evidence=ISO;ISS] [GO:0061205
"paramesonephric duct development" evidence=ISO;ISS] [GO:0072001
"renal system development" evidence=ISO] [GO:0072049 "comma-shaped
body morphogenesis" evidence=ISO;ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISO;ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISO;ISS] [GO:0072164 "mesonephric tubule
development" evidence=IEP] [GO:0072177 "mesonephric duct
development" evidence=IEP] [GO:0072178 "nephric duct morphogenesis"
evidence=ISO;ISS] [GO:0072224 "metanephric glomerulus development"
evidence=IEP] [GO:0072278 "metanephric comma-shaped body
morphogenesis" evidence=IEP] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEP] [GO:0090009 "primitive streak
formation" evidence=ISO;ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISO;ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISO;ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71074 GO:GO:0005634 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059
GO:GO:0035502 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GeneTree:ENSGT00700000104177 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:S71523
IPI:IPI00199573 RefSeq:NP_665887.3 UniGene:Rn.127825
ProteinModelPortal:P63007 SMR:P63007 STRING:P63007
PhosphoSite:P63007 PRIDE:P63007 Ensembl:ENSRNOT00000003799
GeneID:257634 KEGG:rno:257634 InParanoid:P63007 NextBio:624166
Genevestigator:P63007 GermOnline:ENSRNOG00000002812 Uniprot:P63007
Length = 406
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAF-AATP-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|F1NEA7 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104128 OMA:SHHAQQV
EMBL:AADN02012643 IPI:IPI00812020 Ensembl:ENSGALT00000033114
Uniprot:F1NEA7
Length = 367
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+RE LA T L VQVWF+N+RAK +K QR ++++ K D E S HSEG
Sbjct: 100 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKDCESS--------HSEG 151
Query: 97 ESEWVSLDWRSSVQSPVGDKKKSSSV 122
++E L+ QS + D +K+ S+
Sbjct: 152 KTEPPVLE----TQSTIPDTEKTQSI 173
>ZFIN|ZDB-GENE-050309-237 [details] [associations]
symbol:si:ch73-386h18.1 "si:ch73-386h18.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 ZFIN:ZDB-GENE-050309-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717 EMBL:CU607082
IPI:IPI00619238 Ensembl:ENSDART00000113668 ArrayExpress:F1Q7K3
Bgee:F1Q7K3 Uniprot:F1Q7K3
Length = 2962
Score = 126 (49.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKMK 64
+ ++T ++ NL+VK+ +C +KT T + EAL D GL+ RVVQVWFQN RAK K
Sbjct: 2566 KRYRT-QMSNLQVKV---LKACFSDYKTPTMLECEALGNDIGLAKRVVQVWFQNARAKEK 2621
Query: 65 KIQRKAKQQEGDKS--LDKEDSE 85
K + +Q G +S +D+ +E
Sbjct: 2622 KAKLSLAKQFGTESTSIDRPKTE 2644
>UNIPROTKB|Q03014 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0030878 "thyroid
gland development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IDA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IDA] [GO:0008283
"cell proliferation" evidence=IDA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0030154 "cell differentiation" evidence=IC]
[GO:0030183 "B cell differentiation" evidence=ISS] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0070491
"repressing transcription factor binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA;TAS]
[GO:0010944 "negative regulation of transcription by competitive
promoter binding" evidence=TAS] [GO:0017025 "TBP-class protein
binding" evidence=TAS] [GO:0034504 "protein localization to
nucleus" evidence=IDA] [GO:0010621 "negative regulation of
transcription by transcription factor localization" evidence=IC]
[GO:0032993 "protein-DNA complex" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0071103 "DNA conformation
change" evidence=IDA] [GO:0016525 "negative regulation of
angiogenesis" evidence=ISS] [GO:0030948 "negative regulation of
vascular endothelial growth factor receptor signaling pathway"
evidence=ISS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009611
GO:GO:0016055 GO:GO:0009952 GO:GO:0008283 EMBL:CH471066
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0008301 GO:GO:0044212 GO:GO:0007049
GO:GO:0030183 GO:GO:0035264 GO:GO:0001570 GO:GO:0016525
GO:GO:0031016 GO:GO:0007492 GO:GO:0070365 GO:GO:0010944
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0017025 GO:GO:0070491
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0008190
GO:GO:0016973 GO:GO:0030878 EMBL:AL590080 GO:GO:0048853
GO:GO:0010621 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W EMBL:X67235
EMBL:L16499 EMBL:AK314891 EMBL:BC014336 EMBL:BC015110 EMBL:BC050638
EMBL:Z21533 IPI:IPI00008771 PIR:JN0767 RefSeq:NP_002720.1
UniGene:Hs.118651 PDB:2E1O PDBsum:2E1O ProteinModelPortal:Q03014
SMR:Q03014 IntAct:Q03014 MINT:MINT-1439118 STRING:Q03014
PhosphoSite:Q03014 DMDM:547658 PRIDE:Q03014 DNASU:3087
Ensembl:ENST00000282728 GeneID:3087 KEGG:hsa:3087 UCSC:uc001kid.3
GeneCards:GC10P094439 HGNC:HGNC:4901 MIM:604420 neXtProt:NX_Q03014
PharmGKB:PA29274 InParanoid:Q03014 OMA:DNSCDQR PhylomeDB:Q03014
EvolutionaryTrace:Q03014 GenomeRNAi:3087 NextBio:12253
ArrayExpress:Q03014 Bgee:Q03014 CleanEx:HS_HHEX
Genevestigator:Q03014 GermOnline:ENSG00000152804 GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 Uniprot:Q03014
Length = 270
Score = 112 (44.5 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 141 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 191
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSV 122
++++++ Q + L+ DS +Q+ SE +++ SLD SP + S +
Sbjct: 192 WRRLKQENPQSNKKEELESLDSSCDQRQDLPSE-QNKGASLDSSQCSPSPASQEDLESEI 250
>RGD|628759 [details] [associations]
symbol:Prop1 "PROP paired-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009887 "organ morphogenesis" evidence=ISO]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISO]
[GO:0016477 "cell migration" evidence=ISO] [GO:0021979
"hypothalamus cell differentiation" evidence=ISO] [GO:0021984
"adenohypophysis development" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048732 "gland development"
evidence=ISO] [GO:0048850 "hypophysis morphogenesis" evidence=ISO]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:628759 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:P06601 CTD:5626 eggNOG:NOG293463 HOGENOM:HOG000115706
HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X IPI:IPI00194856
EMBL:AB037922 RefSeq:NP_705891.1 UniGene:Rn.86655
ProteinModelPortal:Q8CJH7 SMR:Q8CJH7 STRING:Q8CJH7
PhosphoSite:Q8CJH7 GeneID:266738 KEGG:rno:266738 UCSC:RGD:628759
InParanoid:Q8CJH7 NextBio:624589 Genevestigator:Q8CJH7
Uniprot:Q8CJH7
Length = 223
Score = 110 (43.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
VRE LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 95 VREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQ 130
>UNIPROTKB|E9PTF1 [details] [associations]
symbol:Prop1 "Protein Prop1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628759 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 GO:GO:0048850 OMA:TCFPHPY
IPI:IPI00194856 Ensembl:ENSRNOT00000004872 Uniprot:E9PTF1
Length = 223
Score = 110 (43.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 22/36 (61%), Positives = 27/36 (75%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
VRE LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 95 VREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQ 130
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA +TGL++RV+QVWFQN+R+K +++++
Sbjct: 247 TIKAKQLET-LKNAF-AATP-KPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQ 301
>UNIPROTKB|E1BYW7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0009593 "detection of chemical
stimulus" evidence=IEA] [GO:0016048 "detection of temperature
stimulus" evidence=IEA] [GO:0021516 "dorsal spinal cord
development" evidence=IEA] [GO:0021559 "trigeminal nerve
development" evidence=IEA] [GO:0050954 "sensory perception of
mechanical stimulus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0009593 GO:GO:0016048 CTD:644168
OMA:KGSPLCS EMBL:AADN02027760 EMBL:AADN02027761 IPI:IPI00590363
RefSeq:XP_001234656.2 Ensembl:ENSGALT00000010049 GeneID:771373
KEGG:gga:771373 Uniprot:E1BYW7
Length = 260
Score = 111 (44.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEP--HIKQ-EPHS 94
RE LA L+ VQVWFQN+RAK +K +R + QEG K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGSSDQEGSKEAMAEVAPPVRNLNSPSPAD 122
Query: 95 EGESEWVSLDWRSSVQSPVG 114
+ ++ SL+ + S+ VG
Sbjct: 123 QTRNKKESLEIQQSLSRAVG 142
>UNIPROTKB|J3QQ66 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
EMBL:AC011716 EMBL:AC023200 EMBL:AC087110 HGNC:HGNC:30939
ProteinModelPortal:J3QQ66 Ensembl:ENST00000050961 Uniprot:J3QQ66
Length = 3567
Score = 103 (41.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2885 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2940
Query: 65 KIQ 67
K +
Sbjct: 2941 KFK 2943
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 60 RAKMKKIQRKAKQQEGDKSLDKEDSEP---HIKQEPHSEGES 98
+AK K++ Q D S KED K+EP E +S
Sbjct: 3297 QAKTSKVESDQPQNSNDASETKEDKSTATESTKEEPQLESKS 3338
>UNIPROTKB|Q86UP3 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 HSSP:P02836 eggNOG:NOG301069
KO:K09380 HOGENOM:HOG000155777 HOVERGEN:HBG050606 OrthoDB:EOG4Z0B4P
EMBL:AB083343 EMBL:AY260762 EMBL:AK131408 EMBL:AC011716
EMBL:AC023200 EMBL:AC087110 IPI:IPI00827871 IPI:IPI00941659
IPI:IPI00973446 IPI:IPI00978044 RefSeq:NP_078997.4
UniGene:Hs.458973 ProteinModelPortal:Q86UP3 SMR:Q86UP3
STRING:Q86UP3 PhosphoSite:Q86UP3 DMDM:74762449 PaxDb:Q86UP3
PRIDE:Q86UP3 Ensembl:ENST00000455469 GeneID:79776 KEGG:hsa:79776
UCSC:uc003yat.1 UCSC:uc003yaw.1 CTD:79776 GeneCards:GC08P077593
HGNC:HGNC:30939 HPA:HPA023837 MIM:606940 neXtProt:NX_Q86UP3
PharmGKB:PA134986366 GenomeRNAi:79776 NextBio:69263
ArrayExpress:Q86UP3 Bgee:Q86UP3 CleanEx:HS_ZFHX4
Genevestigator:Q86UP3 Uniprot:Q86UP3
Length = 3567
Score = 103 (41.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2885 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2940
Query: 65 KIQ 67
K +
Sbjct: 2941 KFK 2943
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 60 RAKMKKIQRKAKQQEGDKSLDKEDSEP---HIKQEPHSEGES 98
+AK K++ Q D S KED K+EP E +S
Sbjct: 3297 QAKTSKVESDQPQNSNDASETKEDKSTATESTKEEPQLESKS 3338
>UNIPROTKB|E7EVZ1 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
EMBL:AC011716 EMBL:AC023200 EMBL:AC087110 IPI:IPI00978044
HGNC:HGNC:30939 ProteinModelPortal:E7EVZ1 SMR:E7EVZ1
Ensembl:ENST00000518282 ArrayExpress:E7EVZ1 Bgee:E7EVZ1
Uniprot:E7EVZ1
Length = 3590
Score = 103 (41.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2904 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2959
Query: 65 KIQ 67
K +
Sbjct: 2960 KFK 2962
Score = 52 (23.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 60 RAKMKKIQRKAKQQEGDKSLDKEDSEP---HIKQEPHSEGES 98
+AK K++ Q D S KED K+EP E +S
Sbjct: 3320 QAKTSKVESDQPQNSNDASETKEDKSTATESTKEEPQLESKS 3361
>UNIPROTKB|G3V138 [details] [associations]
symbol:ZFHX4 "Zinc finger homeodomain 4, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 EMBL:CH471068 KO:K09380 EMBL:AC011716
EMBL:AC023200 EMBL:AC087110 RefSeq:NP_078997.4 UniGene:Hs.458973
GeneID:79776 KEGG:hsa:79776 CTD:79776 HGNC:HGNC:30939
GenomeRNAi:79776 NextBio:69263 ProteinModelPortal:G3V138 SMR:G3V138
PRIDE:G3V138 Ensembl:ENST00000521891 OMA:IMMQPVQ
ArrayExpress:G3V138 Bgee:G3V138 Uniprot:G3V138
Length = 3616
Score = 103 (41.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2930 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2985
Query: 65 KIQ 67
K +
Sbjct: 2986 KFK 2988
Score = 52 (23.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 60 RAKMKKIQRKAKQQEGDKSLDKEDSEP---HIKQEPHSEGES 98
+AK K++ Q D S KED K+EP E +S
Sbjct: 3346 QAKTSKVESDQPQNSNDASETKEDKSTATESTKEEPQLESKS 3387
>ZFIN|ZDB-GENE-980526-484 [details] [associations]
symbol:lhx5 "LIM homeobox 5" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP;IDA] [GO:0001654 "eye development" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-484 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001654
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F EMBL:L42547
EMBL:BC098523 IPI:IPI00509409 RefSeq:NP_571293.1 UniGene:Dr.75068
ProteinModelPortal:P52889 SMR:P52889 STRING:P52889
Ensembl:ENSDART00000080693 GeneID:30465 KEGG:dre:30465 CTD:64211
InParanoid:P52889 OMA:SHQGQEM NextBio:20806859 Bgee:P52889
Uniprot:P52889
Length = 399
Score = 114 (45.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAFVAT-P-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>UNIPROTKB|P37137 [details] [associations]
symbol:lhx5 "LIM/homeobox protein Lhx5" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 KO:K09372 CTD:64211 EMBL:L42546 EMBL:BC084744
EMBL:Z11587 PIR:S23803 RefSeq:NP_001084038.1 UniGene:Xl.1047
ProteinModelPortal:P37137 SMR:P37137 GeneID:399270 KEGG:xla:399270
Xenbase:XB-GENE-865965 Uniprot:P37137
Length = 402
Score = 114 (45.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/58 (43%), Positives = 42/58 (72%)
Query: 11 TIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
TI+ L+ LK +F + P T +RE LA++TGL++RV+QVWFQN+R+K +++++
Sbjct: 186 TIKAKQLET-LKAAFIAT-P-KPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ 240
>WB|WBGene00002987 [details] [associations]
symbol:lim-4 species:6239 "Caenorhabditis elegans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0005623
GeneTree:ENSGT00700000104050 EMBL:FO081410 HSSP:P50480 EMBL:U72348
PIR:T27637 RefSeq:NP_508669.1 UniGene:Cel.665
ProteinModelPortal:G5EEA1 SMR:G5EEA1 EnsemblMetazoa:ZC64.4
GeneID:180672 KEGG:cel:CELE_ZC64.4 CTD:180672 WormBase:ZC64.4
OMA:ARQKKWH NextBio:910388 Uniprot:G5EEA1
Length = 355
Score = 113 (44.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 26/58 (44%), Positives = 32/58 (55%)
Query: 39 EALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKED-SEPHIKQEPHSE 95
E +A TGLS RV QVWFQN RA+ KK +K++ GD S P K + SE
Sbjct: 270 EKIASMTGLSKRVTQVWFQNSRARQKKWHQKSEGDNGDSQRSSVGPSSPSQKSDSSSE 327
>UNIPROTKB|O75360 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043066
GO:GO:0016477 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0000976
GO:GO:0060070 Orphanet:95494 MIM:262600 Orphanet:226307
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 OMA:TCFPHPY EMBL:AF076214 EMBL:AF076215 EMBL:AF041141
EMBL:AF041139 EMBL:AF041140 EMBL:AC136940 EMBL:BC069076
IPI:IPI00025308 RefSeq:NP_006252.3 UniGene:Hs.158301
ProteinModelPortal:O75360 SMR:O75360 STRING:O75360
PhosphoSite:O75360 PRIDE:O75360 Ensembl:ENST00000308304 GeneID:5626
KEGG:hsa:5626 UCSC:uc003mif.1 GeneCards:GC05M177419 HGNC:HGNC:9455
MIM:601538 neXtProt:NX_O75360 Orphanet:90695 PharmGKB:PA33808
InParanoid:O75360 PhylomeDB:O75360 GenomeRNAi:5626 NextBio:21868
Bgee:O75360 CleanEx:HS_PROP1 Genevestigator:O75360
GermOnline:ENSG00000175325 Uniprot:O75360
Length = 226
Score = 108 (43.1 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
RE+LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 99 RESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQ 133
>UNIPROTKB|F1PS13 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:AAEX03026515 Ensembl:ENSCAFT00000027221 Uniprot:F1PS13
Length = 284
Score = 110 (43.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T Q + LA + GLS R V++WFQN+RAK +K
Sbjct: 174 EKYRVVYTDHQRLELEKEFH--CNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKT 231
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E S + DS
Sbjct: 232 IKKKISQFENSGSSVQSDS 250
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 99 (39.9 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 20 KLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSL 79
+L+++FN C H + R L+++ GL+ R ++ WFQN+R Q+KA+ + D
Sbjct: 35 RLESTFNEC--QHPDEKQRNQLSRELGLAPRQIKFWFQNRRT-----QKKAQHERADNCA 87
Query: 80 DKEDSE 85
KE+++
Sbjct: 88 LKEEND 93
Score = 39 (18.8 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 111 SPVGDKKKSSSVLKIGYEL 129
SP G K S++ +G+++
Sbjct: 630 SPDGSSKGGGSLITVGFQI 648
>MGI|MGI:96086 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007049 "cell cycle" evidence=ISO] [GO:0007165
"signal transduction" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008190 "eukaryotic initiation factor 4E
binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008301 "DNA binding, bending" evidence=ISO]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IMP]
[GO:0030097 "hemopoiesis" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IMP] [GO:0030183 "B cell
differentiation" evidence=IMP] [GO:0030878 "thyroid gland
development" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0032993 "protein-DNA complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048568
"embryonic organ development" evidence=IMP] [GO:0048729 "tissue
morphogenesis" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060431 "primary lung bud formation"
evidence=IMP] [GO:0061009 "common bile duct development"
evidence=IMP] [GO:0061010 "gall bladder development" evidence=IMP]
[GO:0061011 "hepatic duct development" evidence=IMP] [GO:0061017
"hepatoblast differentiation" evidence=IMP] [GO:0070365 "hepatocyte
differentiation" evidence=IMP] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0071103 "DNA
conformation change" evidence=ISO] [GO:0071837 "HMG box domain
binding" evidence=IPI] [GO:0090009 "primitive streak formation"
evidence=IGI;IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96086 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0009611 GO:GO:0016055 GO:GO:0043565
GO:GO:0001701 GO:GO:0043434 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0016525 GO:GO:0031016
GO:GO:0007492 GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905
GO:GO:0034504 GO:GO:0032993 GO:GO:0048568 GO:GO:0090009
GO:GO:0030948 GO:GO:0022027 GO:GO:0035050 GO:GO:0016973
GO:GO:0030878 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR GO:GO:0071103 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431 EMBL:Z21524
EMBL:AB017132 EMBL:AF132550 EMBL:AK014111 EMBL:AK033664
EMBL:BC057986 IPI:IPI00474062 PIR:S30230 RefSeq:NP_032271.1
UniGene:Mm.33896 ProteinModelPortal:P43120 SMR:P43120 STRING:P43120
PhosphoSite:P43120 PRIDE:P43120 Ensembl:ENSMUST00000025944
GeneID:15242 KEGG:mmu:15242 UCSC:uc008hio.1 InParanoid:P43120
NextBio:287843 Bgee:P43120 CleanEx:MM_HHEX Genevestigator:P43120
GermOnline:ENSMUSG00000024986 Uniprot:P43120
Length = 271
Score = 109 (43.4 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGE 97
R+ LAK LS R V+ WFQN+RAK ++++++ Q +LD D+ Q+ SE +
Sbjct: 168 RKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKDALDSLDTSCEQGQDLPSE-Q 226
Query: 98 SEWVSLDWRSSVQSPVGDKKKSSSV 122
++ SLD SP + S +
Sbjct: 227 NKGASLDRSQCSPSPASQEDPDSEI 251
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 111 (44.1 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 21 LKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK---IQRKAKQQEGDK 77
L+T +N+ P ++E L + TGLS RV++VWFQN+R K KK + ++ +QQ GDK
Sbjct: 206 LRTCYNAN-P-RPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSILMKQLQQQHGDK 263
Query: 78 S 78
+
Sbjct: 264 T 264
>UNIPROTKB|Q8MJI9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9913 "Bos taurus" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0001568 GO:GO:0009953
GO:GO:0000976 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 EMBL:AF453510 EMBL:AF453511
EMBL:AF453512 IPI:IPI00697381 RefSeq:NP_777103.1 UniGene:Bt.11213
ProteinModelPortal:Q8MJI9 SMR:Q8MJI9 STRING:Q8MJI9
Ensembl:ENSBTAT00000009680 GeneID:282563 KEGG:bta:282563 CTD:5626
eggNOG:NOG293463 HOGENOM:HOG000115706 HOVERGEN:HBG053691
InParanoid:Q8MJI9 KO:K09327 OrthoDB:EOG4BZN3X NextBio:20806292
GO:GO:0048850 Uniprot:Q8MJI9
Length = 226
Score = 107 (42.7 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
RE+LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 99 RESLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQ 133
>UNIPROTKB|Q9TTD8 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9615 "Canis lupus familiaris" [GO:0060126 "somatotropin
secreting cell differentiation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 EMBL:AF126157 RefSeq:NP_001018643.1 UniGene:Cfa.24675
ProteinModelPortal:Q9TTD8 SMR:Q9TTD8 Ensembl:ENSCAFT00000000419
GeneID:474647 KEGG:cfa:474647 InParanoid:Q9TTD8 OMA:TCFPHPY
NextBio:20850629 Uniprot:Q9TTD8
Length = 226
Score = 107 (42.7 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
RE LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 99 REGLARDTGLSEARIQVWFQNRRAKQRKQERSLLQ 133
>UNIPROTKB|Q9GLL9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9823 "Sus scrofa" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 HOVERGEN:HBG053691 KO:K09327
GO:GO:0048850 OMA:TCFPHPY EMBL:AF232676 EMBL:AB187272 EMBL:EF188259
RefSeq:NP_001001263.1 UniGene:Ssc.15921 UniGene:Ssc.86965
ProteinModelPortal:Q9GLL9 SMR:Q9GLL9 Ensembl:ENSSSCT00000028015
GeneID:397280 KEGG:ssc:397280 Uniprot:Q9GLL9
Length = 226
Score = 107 (42.7 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
RE LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 99 REGLARDTGLSEARIQVWFQNRRAKQRKQERSLLQ 133
>MGI|MGI:109330 [details] [associations]
symbol:Prop1 "paired like homeodomain factor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0016477 "cell migration" evidence=IGI]
[GO:0021979 "hypothalamus cell differentiation" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0048732 "gland
development" evidence=IMP] [GO:0048850 "hypophysis morphogenesis"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IGI] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:109330 GO:GO:0043066
GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0060070
EMBL:AL627215 GeneTree:ENSGT00700000104273 GO:GO:0021979
GO:GO:0060126 CTD:5626 eggNOG:NOG293463 HOVERGEN:HBG053691
KO:K09327 OrthoDB:EOG4BZN3X GO:GO:0048850 OMA:TCFPHPY EMBL:U77946
IPI:IPI00125485 RefSeq:NP_032962.1 UniGene:Mm.1386
ProteinModelPortal:P97458 SMR:P97458 IntAct:P97458 STRING:P97458
PhosphoSite:P97458 DNASU:19127 Ensembl:ENSMUST00000051159
GeneID:19127 KEGG:mmu:19127 UCSC:uc007itg.1 InParanoid:Q5NCG9
NextBio:295738 Bgee:P97458 CleanEx:MM_PROP1 Genevestigator:P97458
GermOnline:ENSMUSG00000044542 Uniprot:P97458
Length = 223
Score = 106 (42.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
RE LA+DTGLS +QVWFQN+RAK +K +R Q
Sbjct: 96 REGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQ 130
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T Q + LA + GLS R V++WFQN+RAK +K
Sbjct: 174 EKYRVVYTDHQRLELEKEFH--CNRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKM 231
Query: 66 IQRKAKQQEGDKSLDKEDSE 85
I++K Q E + DS+
Sbjct: 232 IKKKISQFENSGGSVQSDSD 251
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 20 KLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRK 69
KL+ SFN+ G+ + R LA+ GLS V+VWFQN+R K KKI +
Sbjct: 49 KLEESFNTS--GYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSR 96
>UNIPROTKB|F1N9R6 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:AADN02054193
EMBL:AADN02054194 IPI:IPI00604352 Ensembl:ENSGALT00000001009
Uniprot:F1N9R6
Length = 3662
Score = 109 (43.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 2942 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 2996
Query: 64 KK 65
KK
Sbjct: 2997 KK 2998
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 71 KQQEGDKSLDKEDSEPHIKQEP 92
K++EG+K+ +KE + P K +P
Sbjct: 3207 KEKEGEKAKEKEKA-PKGKGDP 3227
Score = 40 (19.1 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 18/74 (24%), Positives = 35/74 (47%)
Query: 57 QNQRAKMKKIQRKAKQQEGDKSL--------DKEDSEPHIKQEPHSEGESEWVSLDWRSS 108
Q Q+ + ++ Q+KA+Q +G ++ DK+ ++ KQE E VS +
Sbjct: 3354 QQQQQQQQQQQQKAQQPKGSQTPVPAGAATPDKDPAKEPPKQEEQKNAPRE-VSPLLPNP 3412
Query: 109 VQSPVGDKKKSSSV 122
+ P + K + S+
Sbjct: 3413 PEEPEAEGKGADSL 3426
>UNIPROTKB|F1SDX7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS EMBL:CT990615
Ensembl:ENSSSCT00000011374 Uniprot:F1SDX7
Length = 263
Score = 107 (42.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A +QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASEQEPGAKEPMAEVTPPPVRNINSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 123 GDQARSKKEALEAQQSLGRTVG 144
>RGD|619932 [details] [associations]
symbol:Hhex "hematopoietically expressed homeobox" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001570 "vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=IEA;ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0002009 "morphogenesis of an
epithelium" evidence=ISO] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006406 "mRNA export from
nucleus" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA;ISO]
[GO:0007165 "signal transduction" evidence=IEA;ISO] [GO:0007492
"endoderm development" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=ISO] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA;ISO]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA;ISO]
[GO:0030097 "hemopoiesis" evidence=ISO;TAS] [GO:0030154 "cell
differentiation" evidence=IDA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0030183 "B
cell differentiation" evidence=IEA;ISO] [GO:0030878 "thyroid gland
development" evidence=IEA;ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030948 "negative regulation of vascular
endothelial growth factor receptor signaling pathway"
evidence=ISO;IDA] [GO:0031016 "pancreas development"
evidence=IEA;ISO] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048568 "embryonic organ
development" evidence=IEA;ISO] [GO:0048729 "tissue morphogenesis"
evidence=ISO] [GO:0048853 "forebrain morphogenesis"
evidence=IEA;ISO] [GO:0060431 "primary lung bud formation"
evidence=IEA;ISO] [GO:0061009 "common bile duct development"
evidence=IEA;ISO] [GO:0061010 "gall bladder development"
evidence=IEA;ISO] [GO:0061011 "hepatic duct development"
evidence=IEA;ISO] [GO:0061017 "hepatoblast differentiation"
evidence=IEA;ISO] [GO:0070365 "hepatocyte differentiation"
evidence=IEA;ISO] [GO:0070491 "repressing transcription factor
binding" evidence=IEA;ISO] [GO:0071103 "DNA conformation change"
evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] [GO:0090009 "primitive streak formation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:619932 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0030154 GO:GO:0009611 GO:GO:0043565 GO:GO:0001701
GO:GO:0043434 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0042127 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
GO:GO:0007049 GO:GO:0030183 GO:GO:0035264 GO:GO:0030097
GO:GO:0001570 GO:GO:0016525 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504
GO:GO:0032993 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0016973 GO:GO:0030878
EMBL:CH473953 GeneTree:ENSGT00680000099625 GO:GO:0048853
GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W HSSP:P22808 OMA:DNSCDQR GO:GO:0071103
GO:GO:0061010 GO:GO:0061011 GO:GO:0061017 GO:GO:0002573
GO:GO:0060431 EMBL:BC088135 EMBL:D86383 IPI:IPI00211318
RefSeq:NP_077361.1 UniGene:Rn.12188 SMR:Q9WV22 STRING:Q9WV22
Ensembl:ENSRNOT00000022384 GeneID:79237 KEGG:rno:79237
UCSC:RGD:619932 InParanoid:Q9WV22 NextBio:614664
Genevestigator:Q9WV22 Uniprot:Q9WV22
Length = 271
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 142 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 192
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSV 122
++++++ Q LD D+ Q+ SE +++ SLD SP + S +
Sbjct: 193 WRRLKQENPQSNKKDELDSLDTSCDQGQDLPSE-QNKGASLDSSQCSPSPASPEDPESEI 251
>UNIPROTKB|F1NXB2 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00680000099625 IPI:IPI00584628
EMBL:AADN02046631 Ensembl:ENSGALT00000010965 Uniprot:F1NXB2
Length = 277
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 148 QVRFSNEQTIEL---EKKFETQ------KYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 198
Query: 63 MKKIQRK----AKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKK 118
++++++ K++E + + D D P P GE+E +S + P D
Sbjct: 199 WRRLKQENPQATKKEEAEGTGDHGDPRPEGSPSPAGGGEAEPXDSPSAASQEDPESDVSD 258
Query: 119 SS 120
S
Sbjct: 259 DS 260
>UNIPROTKB|F1NES3 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0016973 "poly(A)+ mRNA export
from nucleus" evidence=IEA] [GO:0022027 "interkinetic nuclear
migration" evidence=IEA] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030878 "thyroid gland
development" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0035050 "embryonic heart tube development" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048568
"embryonic organ development" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0060431 "primary lung bud
formation" evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0061010 "gall bladder development" evidence=IEA]
[GO:0061011 "hepatic duct development" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0071103 "DNA
conformation change" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0008283 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030177 GO:GO:0034504
GO:GO:0032993 GO:GO:0016973 GeneTree:ENSGT00680000099625
OMA:DNSCDQR GO:GO:0071103 EMBL:AADN02046631 IPI:IPI00820051
Ensembl:ENSGALT00000039741 Uniprot:F1NES3
Length = 285
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 157 QVRFSNEQTIEL---EKKFETQ------KYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 207
Query: 63 MKKIQRK----AKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKK 118
++++++ K++E + + D D P P GE+E +S + P D
Sbjct: 208 WRRLKQENPQATKKEEAEGTGDHGDPRPEGSPSPAGGGEAEPXDSPSAASQEDPESDVSD 267
Query: 119 SS 120
S
Sbjct: 268 DS 269
>UNIPROTKB|F1S397 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:CU442712
EMBL:CU694824 Ensembl:ENSSSCT00000003049 Uniprot:F1S397
Length = 2637
Score = 109 (43.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 1882 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 1936
Query: 64 KK 65
KK
Sbjct: 1937 KK 1938
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 67 QRKAKQQEGDKSLDKEDSEPHIKQEP 92
Q++ K ++G+K +KE + K EP
Sbjct: 2159 QQQRKDKDGEKVKEKEKAHKG-KGEP 2183
>UNIPROTKB|Q90Z54 [details] [associations]
symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
Length = 263
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKI 66
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +KI
Sbjct: 153 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKI 210
Query: 67 -QRKAKQQEGDKSLDKEDS 84
++K Q +G + DS
Sbjct: 211 IKKKISQFDGSGGSVQSDS 229
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 33 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKQQQQQ 73
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 31 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQ 71
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 31 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQ 71
>UNIPROTKB|E1BDA0 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 CTD:644168 OMA:KGSPLCS
EMBL:DAAA02062229 IPI:IPI00734128 RefSeq:XP_002699015.1
Ensembl:ENSBTAT00000015907 GeneID:521995 KEGG:bta:521995
NextBio:20873419 Uniprot:E1BDA0
Length = 263
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNLNSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 123 GDQARSKKEALEAQQSLGRTVG 144
>UNIPROTKB|A6NNA5 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 EMBL:CH471187 EMBL:AC027674 IPI:IPI00060044
UniGene:Hs.534530 ProteinModelPortal:A6NNA5 SMR:A6NNA5
STRING:A6NNA5 PhosphoSite:A6NNA5 PRIDE:A6NNA5
Ensembl:ENST00000374139 UCSC:uc021pqd.1 GeneCards:GC10M050573
HGNC:HGNC:21536 HPA:HPA043978 MIM:606701 neXtProt:NX_A6NNA5
eggNOG:NOG39948 HOVERGEN:HBG106743 InParanoid:A6NNA5
OrthoDB:EOG49CQ88 PhylomeDB:A6NNA5 ArrayExpress:A6NNA5 Bgee:A6NNA5
CleanEx:HS_DRGX Genevestigator:A6NNA5 Uniprot:A6NNA5
Length = 263
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 123 GDQARSKKEALEAQQSLGRTVG 144
>UNIPROTKB|E2QSM2 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954
"sensory perception of mechanical stimulus" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS
EMBL:AAEX03015368 EMBL:AAEX03015367 Ensembl:ENSCAFT00000010667
Uniprot:E2QSM2
Length = 264
Score = 105 (42.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 64 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 123
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 124 GDQARSKKEALEAQQSLGRTVG 145
>UNIPROTKB|C9JW76 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0021559 GO:GO:0021516 EMBL:AC027674
UniGene:Hs.534530 HGNC:HGNC:21536 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 IPI:IPI00943047 RefSeq:NP_001073989.1
ProteinModelPortal:C9JW76 SMR:C9JW76 STRING:C9JW76
Ensembl:ENST00000434016 GeneID:644168 KEGG:hsa:644168
UCSC:uc010qgq.2 CTD:644168 PharmGKB:PA162384078 OMA:KGSPLCS
GenomeRNAi:644168 NextBio:115949 ArrayExpress:C9JW76 Bgee:C9JW76
Uniprot:C9JW76
Length = 268
Score = 105 (42.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 68 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 127
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 128 GDQARSKKEALEAQQSLGRTVG 149
>WB|WBGene00000463 [details] [associations]
symbol:ceh-43 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0007155 "cell adhesion" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0040011 GO:GO:0000003 GO:GO:0007155
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG263092 KO:K09316
GeneTree:ENSGT00700000104129 EMBL:Z32680 PIR:C88429 PIR:S43577
RefSeq:NP_497904.1 ProteinModelPortal:Q18273 SMR:Q18273
STRING:Q18273 PaxDb:Q18273 PRIDE:Q18273 EnsemblMetazoa:C28A5.4
GeneID:175581 KEGG:cel:CELE_C28A5.4 UCSC:C28A5.4 CTD:175581
WormBase:C28A5.4 InParanoid:Q18273 OMA:DTEESKP NextBio:888760
ArrayExpress:Q18273 Uniprot:Q18273
Length = 273
Score = 105 (42.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/85 (36%), Positives = 47/85 (55%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSE-- 95
R ALA + GLS V++WFQN+R+K Q+K K D + D+ED + + +P S
Sbjct: 132 RAALAHELGLSQTQVKIWFQNRRSK----QKKQKGGSSDHASDEEDDDTE-ESKPESPPM 186
Query: 96 GESEWV--SLDWRSSVQSPVGDKKK 118
GES + S + R+ V S + + K
Sbjct: 187 GESVMIQESSEPRTLVSSSIKTEMK 211
>UNIPROTKB|J9P914 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104050
EMBL:AAEX03016371 Ensembl:ENSCAFT00000046950 Uniprot:J9P914
Length = 113
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDK-SLDKEDSEPHIKQE 91
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK SL P +
Sbjct: 1 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHNDKTSLQGLTGTPLVAGS 60
Query: 92 P 92
P
Sbjct: 61 P 61
>UNIPROTKB|F8VU08 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0002573 "myeloid leukocyte differentiation"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0016525 "negative regulation of angiogenesis" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0030177 "positive regulation of Wnt receptor signaling pathway"
evidence=IEA] [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030948
"negative regulation of vascular endothelial growth factor receptor
signaling pathway" evidence=IEA] [GO:0031016 "pancreas development"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0043434 "response to peptide hormone stimulus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0060431 "primary lung bud formation" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0061010 "gall
bladder development" evidence=IEA] [GO:0061011 "hepatic duct
development" evidence=IEA] [GO:0061017 "hepatoblast
differentiation" evidence=IEA] [GO:0070365 "hepatocyte
differentiation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0090009 "primitive streak formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
GO:GO:0005634 GO:GO:0005737 GO:GO:0007165 GO:GO:0009611
GO:GO:0043565 GO:GO:0001701 GO:GO:0043434 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042127
GO:GO:0000122 GO:GO:0030183 GO:GO:0035264 GO:GO:0001570
GO:GO:0016525 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 GO:GO:0048568 GO:GO:0090009 GO:GO:0030948
GO:GO:0022027 GO:GO:0035050 GO:GO:0030878 EMBL:AL590080
GO:GO:0048853 GO:GO:0061009 HGNC:HGNC:4901 GO:GO:0061010
GO:GO:0061011 GO:GO:0061017 GO:GO:0002573 GO:GO:0060431
IPI:IPI01021632 SMR:F8VU08 Ensembl:ENST00000472590
Ensembl:ENST00000492654 Uniprot:F8VU08
Length = 98
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 47 LSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWR 106
LS R V+ WFQN+RAK ++++++ Q + L+ DS +Q+ SE +++ SLD
Sbjct: 4 LSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSE-QNKGASLDSS 62
Query: 107 SSVQSPVGDKKKSSSV 122
SP + S +
Sbjct: 63 QCSPSPASQEDLESEI 78
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEP 92
T + + LA GLS R V++WFQN+RAK +KI +K QQ+ + + P +P
Sbjct: 55 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQP 113
>MGI|MGI:88361 [details] [associations]
symbol:Cdx2 "caudal type homeobox 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0001824 "blastocyst development" evidence=IMP] [GO:0001829
"trophectodermal cell differentiation" evidence=IMP;IDA]
[GO:0001890 "placenta development" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008333
"endosome to lysosome transport" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0035019
"somatic stem cell maintenance" evidence=IMP] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045597
"positive regulation of cell differentiation" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0060711 "labyrinthine layer development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88361 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0043565 GO:GO:0045597
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 KO:K09312 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 CTD:1045 eggNOG:NOG304047
OMA:WMRKPTQ GO:GO:0045197 EMBL:U00454 EMBL:S74520 IPI:IPI00320937
PIR:A53808 RefSeq:NP_031699.2 UniGene:Mm.20358
ProteinModelPortal:P43241 SMR:P43241 STRING:P43241
PhosphoSite:P43241 PRIDE:P43241 Ensembl:ENSMUST00000031650
GeneID:12591 KEGG:mmu:12591 InParanoid:P43241 NextBio:281738
Bgee:P43241 CleanEx:MM_CDX2 Genevestigator:P43241
GermOnline:ENSMUSG00000029646 Uniprot:P43241
Length = 311
Score = 105 (42.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQ 90
T + + LA GLS R V++WFQN+RAK +KI++K +QQ+ + P Q
Sbjct: 211 TIRRKSELAATLGLSERQVKIWFQNRRAKERKIKKKQQQQQQQQQQQPPQPPPQPSQ 267
>UNIPROTKB|Q15911 [details] [associations]
symbol:ZFHX3 "Zinc finger homeobox protein 3" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IDA] [GO:0045663
"positive regulation of myoblast differentiation" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0044212 Gene3D:3.30.160.60
GO:GO:0007517 EMBL:CH471166 GO:GO:0045662 GO:GO:0045663
eggNOG:NOG301069 EMBL:L32832 EMBL:D10250 EMBL:AC004943
EMBL:AC132068 EMBL:AC002044 IPI:IPI00014186 IPI:IPI00219003
PIR:A41948 RefSeq:NP_001158238.1 RefSeq:NP_008816.3
UniGene:Hs.598297 PDB:2DA1 PDB:2DA2 PDB:2DA3 PDBsum:2DA1
PDBsum:2DA2 PDBsum:2DA3 ProteinModelPortal:Q15911 SMR:Q15911
IntAct:Q15911 MINT:MINT-1462085 STRING:Q15911 PhosphoSite:Q15911
DMDM:108935822 PaxDb:Q15911 PeptideAtlas:Q15911 PRIDE:Q15911
Ensembl:ENST00000268489 Ensembl:ENST00000397992 GeneID:463
KEGG:hsa:463 UCSC:uc002fck.3 CTD:463 GeneCards:GC16M072816
H-InvDB:HIX0038876 HGNC:HGNC:777 MIM:104155 neXtProt:NX_Q15911
PharmGKB:PA162409676 HOGENOM:HOG000155777 HOVERGEN:HBG050606
InParanoid:Q15911 KO:K09378 OMA:SMDAMEI OrthoDB:EOG4Z0B4P
PhylomeDB:Q15911 ChiTaRS:ZFHX3 EvolutionaryTrace:Q15911
GenomeRNAi:463 NextBio:1915 ArrayExpress:Q15911 Bgee:Q15911
CleanEx:HS_ZFHX3 Genevestigator:Q15911 GermOnline:ENSG00000140836
Uniprot:Q15911
Length = 3703
Score = 109 (43.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 2947 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 3001
Query: 64 KK 65
KK
Sbjct: 3002 KK 3003
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 68 RKAKQQEGDKSLDKEDSE--PHIKQEPHSEGES 98
+++ + E K+ +E S P + +EP +E +S
Sbjct: 3416 KESPKPEEQKNTPREVSPLLPKLPEEPEAESKS 3448
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA GLS R V++WFQN+RAK +KI +K QQ+
Sbjct: 48 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQ 88
>UNIPROTKB|E2RBC5 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005525 GO:GO:0005739 GO:GO:0043565 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:AAEX03004091
Ensembl:ENSCAFT00000032240 Uniprot:E2RBC5
Length = 3719
Score = 109 (43.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 2964 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 3018
Query: 64 KK 65
KK
Sbjct: 3019 KK 3020
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 68 RKAKQQEGDKSLDKEDSE--PHIKQEPHSEGES 98
+++ + E K+ +E S P + +EP +E +S
Sbjct: 3432 KESPKPEEQKNAPREVSPLLPKLPEEPEAESKS 3464
>MGI|MGI:2148204 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0009593 "detection of chemical stimulus"
evidence=IMP] [GO:0016048 "detection of temperature stimulus"
evidence=IMP] [GO:0021516 "dorsal spinal cord development"
evidence=IMP] [GO:0021559 "trigeminal nerve development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:2148204 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0021559 GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743
OrthoDB:EOG49CQ88 EMBL:EU670677 EMBL:EU670678 EMBL:AK039633
EMBL:BC132613 EMBL:BC145917 EMBL:AY116506 IPI:IPI00280476
IPI:IPI00896701 RefSeq:NP_001001796.1 UniGene:Mm.119274 HSSP:Q99697
ProteinModelPortal:Q8BYH0 SMR:Q8BYH0 STRING:Q8BYH0
PhosphoSite:Q8BYH0 PRIDE:Q8BYH0 Ensembl:ENSMUST00000068938
GeneID:107751 KEGG:mmu:107751 CTD:107751 HOGENOM:HOG000207632
InParanoid:B2ZIF4 OMA:PPARNIN NextBio:359376 Bgee:Q8BYH0
CleanEx:MM_PRRXL1 Genevestigator:Q8BYH0 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 Uniprot:Q8BYH0
Length = 263
Score = 103 (41.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ S+ +L+ + S+ VG
Sbjct: 123 GDQTRSKKEALEAQQSLGRTVG 144
>MGI|MGI:2153518 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IGI;IMP] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:2153518 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0048589
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 HSSP:P06601 CTD:127343
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OMA:PDTQLDT EMBL:AF448118 EMBL:AF499446 EMBL:AB037698 EMBL:AF421857
EMBL:AF421858 EMBL:AF463513 EMBL:AL627105 EMBL:BC050912
EMBL:AF461039 IPI:IPI00407603 IPI:IPI00752762 RefSeq:NP_001020738.1
RefSeq:NP_570935.3 UniGene:Mm.213206 UniGene:Mm.413175
ProteinModelPortal:Q91ZK4 SMR:Q91ZK4 MINT:MINT-1347271
STRING:Q91ZK4 PhosphoSite:Q91ZK4 PRIDE:Q91ZK4
Ensembl:ENSMUST00000064806 Ensembl:ENSMUST00000084338
Ensembl:ENSMUST00000124071 GeneID:140477 KEGG:mmu:140477
UCSC:uc008ufr.1 InParanoid:B1ASG1 OrthoDB:EOG4BCDNN NextBio:369772
Bgee:Q91ZK4 CleanEx:MM_DMBX1 Genevestigator:Q91ZK4
GermOnline:ENSMUSG00000028707 Uniprot:Q91ZK4
Length = 381
Score = 105 (42.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S H EG
Sbjct: 100 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS--------HGEG 151
Query: 97 ESEWVSLDWRSSVQSPVG 114
+ E + D + + P G
Sbjct: 152 KVEAPASDTQLETEQPPG 169
>UNIPROTKB|F1SC87 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:CU467586 RefSeq:NP_001231508.1
UniGene:Ssc.15862 Ensembl:ENSSSCT00000011460 GeneID:397232
KEGG:ssc:397232 Uniprot:F1SC87
Length = 269
Score = 102 (41.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 141 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 191
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSV 122
++++++ Q + L+ D+ +Q+ SE +LD SPV + S +
Sbjct: 192 WRRLKQENPQNNKKEELESLDNSCDQRQDLPSEQNKG--ALDSSQCSPSPVSQEDLESEI 249
>UNIPROTKB|Q05502 [details] [associations]
symbol:HHEX "Hematopoietically-expressed homeobox protein
HHEX" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC;ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 eggNOG:NOG252905 EMBL:X64711 IPI:IPI00584628
PIR:S78063 RefSeq:NP_990583.1 UniGene:Gga.3316
ProteinModelPortal:Q05502 SMR:Q05502 STRING:Q05502 GeneID:396182
KEGG:gga:396182 CTD:3087 HOGENOM:HOG000049110 HOVERGEN:HBG055460
KO:K08024 OrthoDB:EOG4XKV7W NextBio:20816236 Uniprot:Q05502
Length = 277
Score = 102 (41.0 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 148 QVRFSNEQTIEL---EKKFETQ------KYLSPPERKRLAKLLQLSERQVKTWFQNRRAK 198
Query: 63 MKKIQRK----AKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGD-KK 117
++++++ K++E + + D D P GE+E +S + P D
Sbjct: 199 WRRLKQENPQATKKEEAEGTGDHGDPRSEGSPSPAGGGEAEPQDSPSAASQEDPESDVSD 258
Query: 118 KSSSVLKIGYELGFF 132
S + I + GF+
Sbjct: 259 DSDQEVDIEGDKGFY 273
>UNIPROTKB|K7GKV4 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:FP245529 RefSeq:XP_003360417.1
Ensembl:ENSSSCT00000034899 GeneID:100623433 Uniprot:K7GKV4
Length = 284
Score = 102 (41.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +K
Sbjct: 174 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM 231
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E + DS
Sbjct: 232 IKKKISQFENSGGSVQSDS 250
>UNIPROTKB|E1BAV6 [details] [associations]
symbol:LOC519648 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:DAAA02072594 EMBL:DAAA02072595 IPI:IPI00696146
Ensembl:ENSBTAT00000002260 Uniprot:E1BAV6
Length = 285
Score = 102 (41.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +K
Sbjct: 175 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM 232
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E + DS
Sbjct: 233 IKKKISQFENSGGSVQSDS 251
>UNIPROTKB|I3L5H5 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ EMBL:FP245529
Ensembl:ENSSSCT00000030959 Uniprot:I3L5H5
Length = 286
Score = 102 (41.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +K
Sbjct: 176 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM 233
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E + DS
Sbjct: 234 IKKKISQFENSGGSVQSDS 252
>RGD|1561529 [details] [associations]
symbol:Cdx4 "caudal type homeo box 4" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA;ISO] [GO:0001890 "placenta development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0060711 "labyrinthine layer development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1561529 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000122 GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 KO:K09312
OrthoDB:EOG42FSK7 CTD:1046 OMA:FQPIEIQ EMBL:CH473969
IPI:IPI00202224 RefSeq:NP_001100412.1 UniGene:Rn.218668
Ensembl:ENSRNOT00000003973 GeneID:302400 KEGG:rno:302400
UCSC:RGD:1561529 NextBio:649569 Uniprot:D3ZF67
Length = 288
Score = 102 (41.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +K
Sbjct: 178 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM 235
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E + DS
Sbjct: 236 IKKKISQFENSGGSVQSDS 254
>UNIPROTKB|F1MC18 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 GO:GO:0048704 GeneTree:ENSGT00700000104013 CTD:257
KO:K09323 OMA:PYSHPHG GO:GO:0007389 EMBL:DAAA02007556
IPI:IPI00714755 RefSeq:NP_001179482.1 UniGene:Bt.61185 PRIDE:F1MC18
Ensembl:ENSBTAT00000027924 GeneID:522085 KEGG:bta:522085
NextBio:20873443 Uniprot:F1MC18
Length = 343
Score = 103 (41.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 40/108 (37%), Positives = 50/108 (46%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 160 FSTFQLEELEKVFQKTHY----PD---VYAREQLAVRTDLTEARVQVWFQNRRAKWRKRE 212
Query: 68 RKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQ-SPVG 114
R K QEG S I P ++ + + W SS SP G
Sbjct: 213 RYGKIQEGRNPFT---SAYDISMLPRTDSHPQLQNSLWPSSGSGSPGG 257
>RGD|628616 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0009593 "detection of chemical stimulus"
evidence=IEA;ISO] [GO:0016048 "detection of temperature stimulus"
evidence=IEA;ISO] [GO:0021516 "dorsal spinal cord development"
evidence=IEA;ISO] [GO:0021559 "trigeminal nerve development"
evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0050954 "sensory perception of mechanical
stimulus" evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 101 (40.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ + +L+ + S+ VG
Sbjct: 123 GDQARGKKEALEAQQSLGRTVG 144
>UNIPROTKB|Q62798 [details] [associations]
symbol:Drgx "Dorsal root ganglia homeobox protein"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 101 (40.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE-GDKSLDKEDSEPHIKQ----EP 92
RE LA L+ VQVWFQN+RAK +K +R A QE G K E + P ++ P
Sbjct: 63 REELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPP 122
Query: 93 HSEGESEWVSLDWRSSVQSPVG 114
+ + +L+ + S+ VG
Sbjct: 123 GDQARGKKEALEAQQSLGRTVG 144
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHI 88
T + + LA GL+ R V++WFQN+RAK +K+ +K QQ+ + + P +
Sbjct: 32 TIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKKKLQQQSQPTSTTTPTPPAV 86
>ZFIN|ZDB-GENE-040624-1 [details] [associations]
symbol:isl1l "islet1, like" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-040624-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671
HOGENOM:HOG000236304 eggNOG:NOG295777 EMBL:AY423019 IPI:IPI00495237
RefSeq:NP_001002043.1 UniGene:Dr.156646 ProteinModelPortal:Q6TEN0
SMR:Q6TEN0 GeneID:415131 KEGG:dre:415131 CTD:415131
NextBio:20818810 Uniprot:Q6TEN0
Length = 323
Score = 102 (41.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKE--DSEPHIKQEPHS 94
++E L + TGLS RV++VWFQN+R K KK R + K L+ EP + S
Sbjct: 201 MKEQLVEMTGLSPRVIRVWFQNKRCKDKK--RSLTMRHTQKQLEGHLVSEEPLLLVSTES 258
Query: 95 EGESEWVSLDWR 106
+ +S W+
Sbjct: 259 QDSDVMISPPWK 270
>MGI|MGI:88362 [details] [associations]
symbol:Cdx4 "caudal type homeobox 4" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0001890 "placenta development" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0060711 "labyrinthine layer development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88362 GO:GO:0005634
GO:GO:0009952 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
CTD:1046 EMBL:L08061 IPI:IPI00116620 PIR:A56676 RefSeq:NP_031700.1
UniGene:Mm.4353 ProteinModelPortal:Q07424 SMR:Q07424 STRING:Q07424
PhosphoSite:Q07424 PRIDE:Q07424 Ensembl:ENSMUST00000033689
GeneID:12592 KEGG:mmu:12592 InParanoid:Q07424 NextBio:281742
Bgee:Q07424 CleanEx:MM_CDX4 Genevestigator:Q07424
GermOnline:ENSMUSG00000031326 Uniprot:Q07424
Length = 282
Score = 101 (40.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK- 65
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +K
Sbjct: 172 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKM 229
Query: 66 IQRKAKQQEGDKSLDKEDS 84
I++K Q E + DS
Sbjct: 230 IKKKISQFENTGGSVQSDS 248
>UNIPROTKB|F1PL78 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
EMBL:AAEX03009771 Ensembl:ENSCAFT00000006786 Uniprot:F1PL78
Length = 379
Score = 103 (41.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE---PH 93
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S K E P
Sbjct: 101 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGESKPEAPTPD 160
Query: 94 SEGESE 99
++ E+E
Sbjct: 161 TQLETE 166
>UNIPROTKB|Q8NFW5 [details] [associations]
symbol:DMBX1 "Diencephalon/mesencephalon homeobox protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007420 "brain
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0048589
"developmental growth" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0007417 "central
nervous system development" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045892 GO:GO:0007420
EMBL:CH471059 GO:GO:0043565 GO:GO:0008344 GO:GO:0008343
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AF398527 EMBL:AF398528
EMBL:AB037699 EMBL:AL137797 IPI:IPI00219522 IPI:IPI00335270
RefSeq:NP_671725.1 RefSeq:NP_757379.1 UniGene:Hs.375623 HSSP:P06601
ProteinModelPortal:Q8NFW5 SMR:Q8NFW5 STRING:Q8NFW5
PhosphoSite:Q8NFW5 DMDM:74762571 PRIDE:Q8NFW5
Ensembl:ENST00000360032 Ensembl:ENST00000371956 GeneID:127343
KEGG:hsa:127343 UCSC:uc001cpw.3 UCSC:uc001cpx.3 CTD:127343
GeneCards:GC01P046974 HGNC:HGNC:19026 HPA:HPA026811 MIM:607410
neXtProt:NX_Q8NFW5 PharmGKB:PA38780 eggNOG:NOG238265
HOGENOM:HOG000261650 HOVERGEN:HBG061416 InParanoid:Q8NFW5
OMA:PDTQLDT GenomeRNAi:127343 NextBio:82068 Bgee:Q8NFW5
CleanEx:HS_DMBX1 Genevestigator:Q8NFW5 GermOnline:ENSG00000197587
Uniprot:Q8NFW5
Length = 382
Score = 103 (41.3 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S H EG
Sbjct: 100 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS--------HGEG 151
Query: 97 ESEWVSLDWRSSVQSP 112
++E + D + + P
Sbjct: 152 KAEAPTPDTQLDTEQP 167
>MGI|MGI:1277097 [details] [associations]
symbol:Alx3 "aristaless-like homeobox 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0042981 "regulation of apoptotic process" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1277097 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
CTD:257 eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OMA:PYSHPHG
OrthoDB:EOG40K810 GO:GO:0007389 EMBL:U96109 IPI:IPI00115634
RefSeq:NP_031467.1 UniGene:Mm.10112 ProteinModelPortal:O70137
SMR:O70137 STRING:O70137 PhosphoSite:O70137 PRIDE:O70137
DNASU:11694 Ensembl:ENSMUST00000014747 GeneID:11694 KEGG:mmu:11694
InParanoid:O70137 NextBio:279353 Bgee:O70137 CleanEx:MM_ALX3
Genevestigator:O70137 GermOnline:ENSMUSG00000014603 Uniprot:O70137
Length = 343
Score = 102 (41.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 160 FSTFQLEELEKVFQKTHY----PD---VYAREQLALRTDLTEARVQVWFQNRRAKWRKRE 212
Query: 68 RKAKQQEG 75
R K QEG
Sbjct: 213 RYGKMQEG 220
>UNIPROTKB|E2RKQ8 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349
"bone morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 GO:GO:0060349 KO:K09312 CTD:1044 OMA:YSHVEPG
EMBL:AAEX03003101 RefSeq:XP_855089.1 Ensembl:ENSCAFT00000028928
GeneID:612256 KEGG:cfa:612256 NextBio:20897788 Uniprot:E2RKQ8
Length = 265
Score = 100 (40.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 180 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQ 220
>UNIPROTKB|P47902 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:U16360 EMBL:U15212 EMBL:U51095 EMBL:AF239666 EMBL:BC096251
IPI:IPI00790637 IPI:IPI00795021 PIR:I38868 PIR:I38881
RefSeq:NP_001795.2 UniGene:Hs.1545 ProteinModelPortal:P47902
SMR:P47902 MINT:MINT-6800278 STRING:P47902 PhosphoSite:P47902
DMDM:116241291 PRIDE:P47902 Ensembl:ENST00000231656 GeneID:1044
KEGG:hsa:1044 UCSC:uc003lrq.3 GeneCards:GC05P149526 HGNC:HGNC:1805
MIM:600746 neXtProt:NX_P47902 PharmGKB:PA26351 InParanoid:P47902
OMA:YSHVEPG PhylomeDB:P47902 GenomeRNAi:1044 NextBio:4377
ArrayExpress:P47902 Bgee:P47902 CleanEx:HS_CDX1
Genevestigator:P47902 GermOnline:ENSG00000113722 Uniprot:P47902
Length = 265
Score = 100 (40.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 180 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQ 220
>UNIPROTKB|J9NS81 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:AAEX03009771 Ensembl:ENSCAFT00000047515
Uniprot:J9NS81
Length = 414
Score = 103 (41.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE---PH 93
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S K E P
Sbjct: 136 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGESKPEAPTPD 195
Query: 94 SEGESE 99
++ E+E
Sbjct: 196 TQLETE 201
>MGI|MGI:88360 [details] [associations]
symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
GermOnline:ENSMUSG00000024619 Uniprot:P18111
Length = 268
Score = 100 (40.3 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA + GL+ R V++WFQN+RAK +K+ +K +QQ+
Sbjct: 180 TIRRKSELAANLGLTERQVKIWFQNRRAKERKVNKKKQQQQ 220
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKI 66
+ ++ + + +++L+ F+ C + T + + LA + GLS R V++WFQN+RAK +KI
Sbjct: 2 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKI 59
>RGD|1308265 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA;ISO] [GO:0008344
"adult locomotory behavior" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308265 GO:GO:0007420
GO:GO:0043565 GO:GO:0008344 GO:GO:0008343 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 OrthoDB:EOG4BCDNN IPI:IPI00764573
Ensembl:ENSRNOT00000057055 UCSC:RGD:1308265 Uniprot:D3ZMA3
Length = 381
Score = 102 (41.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE-PHSE 95
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S K E P S
Sbjct: 100 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKMETPASN 159
Query: 96 GESE 99
+ E
Sbjct: 160 TQLE 163
>UNIPROTKB|F1S615 [details] [associations]
symbol:LOC100621405 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:CU137690 Ensembl:ENSSSCT00000007462 Uniprot:F1S615
Length = 254
Score = 99 (39.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 71 FSTFQLEELEKVFQKTHY----PD---VYAREQLALRTDLTEARVQVWFQNRRAKWRKRE 123
Query: 68 RKAKQQEG 75
R K QEG
Sbjct: 124 RYGKIQEG 131
>UNIPROTKB|E2RI97 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060711 "labyrinthine layer development"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008333 "endosome to lysosome transport"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0001829 "trophectodermal cell differentiation"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 KO:K09312 CTD:1045 OMA:WMRKPTQ
GO:GO:0045197 EMBL:AAEX03014241 RefSeq:XP_543154.2
Ensembl:ENSCAFT00000010860 GeneID:486028 KEGG:cfa:486028
NextBio:20859896 Uniprot:E2RI97
Length = 314
Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPH 93
T + + LA GLS R V++WFQN+RAK +KI +K QQ+ + + + P Q P
Sbjct: 212 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPPQ-APPPAPQPPQ 270
Query: 94 SE 95
+
Sbjct: 271 PQ 272
>ZFIN|ZDB-GENE-050417-97 [details] [associations]
symbol:dmbx1b "diencephalon/mesencephalon homeobox
1b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0050767 "regulation of neurogenesis"
evidence=IGI;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050417-97 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041
GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OrthoDB:EOG4BCDNN EMBL:DQ317638 EMBL:BC093284 IPI:IPI00487260
RefSeq:NP_001017625.1 UniGene:Dr.91498 ProteinModelPortal:Q566X8
SMR:Q566X8 Ensembl:ENSDART00000026693 GeneID:550288 KEGG:dre:550288
CTD:550288 InParanoid:Q566X8 OMA:EDNADRE NextBio:20879549
Bgee:Q566X8 Uniprot:Q566X8
Length = 369
Score = 101 (40.6 bits), Expect = 0.00010, P = 0.00010
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGD--KSLDKEDSEPHIKQE-PH 93
+RE LA T L VQVWF+N+RAK +K QR ++++ K E ++ K+E P
Sbjct: 95 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQRLKEAGTEGAQDEGKEEAPP 154
Query: 94 SEGESEWVSLDWRSSVQSP 112
E ++ LD R +P
Sbjct: 155 VEAQAPPSPLDGRGLTSAP 173
>RGD|1595784 [details] [associations]
symbol:Hoxc9 "homeobox C9" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA;ISO] [GO:0048706 "embryonic skeletal
system development" evidence=ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 RGD:1595784 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
eggNOG:NOG314669 EMBL:S76301 EMBL:M37568 IPI:IPI01016344 PIR:D43559
UniGene:Rn.91646 ProteinModelPortal:P18866 SMR:P18866 STRING:P18866
UCSC:RGD:1595784 HOVERGEN:HBG107057 Genevestigator:P18866
Uniprot:P18866
Length = 108
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 13 RLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
R L+++ + FN + +V AL GL+ R V++WFQN+R K KK K K
Sbjct: 24 RYQTLELEKEFLFNPYLTRKRRIEVSHAL----GLTERQVKIWFQNRRMKWKKENNKDKL 79
Query: 73 QEGDKSLDKEDSEPHIKQEPHSEGESE 99
G + +K + E + ++E E + E
Sbjct: 80 P-GARDEEKVEEEGNEEEEKEEEEKEE 105
>UNIPROTKB|P18866 [details] [associations]
symbol:Hoxc8 "Homeobox protein Hox-C8" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1595784 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 eggNOG:NOG314669 EMBL:S76301 EMBL:M37568
IPI:IPI01016344 PIR:D43559 UniGene:Rn.91646
ProteinModelPortal:P18866 SMR:P18866 STRING:P18866 UCSC:RGD:1595784
HOVERGEN:HBG107057 Genevestigator:P18866 Uniprot:P18866
Length = 108
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 13 RLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
R L+++ + FN + +V AL GL+ R V++WFQN+R K KK K K
Sbjct: 24 RYQTLELEKEFLFNPYLTRKRRIEVSHAL----GLTERQVKIWFQNRRMKWKKENNKDKL 79
Query: 73 QEGDKSLDKEDSEPHIKQEPHSEGESE 99
G + +K + E + ++E E + E
Sbjct: 80 P-GARDEEKVEEEGNEEEEKEEEEKEE 105
>UNIPROTKB|F1MR77 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:DAAA02008995 IPI:IPI00700903 UniGene:Bt.106532
Ensembl:ENSBTAT00000012679 NextBio:20878789 Uniprot:F1MR77
Length = 379
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEG 96
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S H EG
Sbjct: 100 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS--------HGEG 151
Query: 97 ESEWVSLDWRSSVQSP 112
++E + D + P
Sbjct: 152 KTEAPTPDTQLETDQP 167
>UNIPROTKB|F1S3W3 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:FP101978 Ensembl:ENSSSCT00000004315 Uniprot:F1S3W3
Length = 385
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE---PH 93
+RE LA T L VQVWF+N+RAK +K QR ++++ K + E S K E P
Sbjct: 101 MRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGSHGEGKTEAPPPD 160
Query: 94 SEGESE 99
++ E+E
Sbjct: 161 TQLETE 166
>FB|FBgn0000015 [details] [associations]
symbol:Abd-B "Abdominal B" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0008406
"gonad development" evidence=NAS] [GO:0035224 "genital disc
anterior/posterior pattern formation" evidence=IEP] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0007506 "gonadal mesoderm development"
evidence=IMP] [GO:0008354 "germ cell migration" evidence=IMP;TAS]
[GO:0007280 "pole cell migration" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;NAS] [GO:0035277 "spiracle morphogenesis, open
tracheal system" evidence=IMP] [GO:0007494 "midgut development"
evidence=TAS] [GO:0008595 "anterior/posterior axis specification,
embryo" evidence=NAS] [GO:0007385 "specification of segmental
identity, abdomen" evidence=IMP;NAS] [GO:0035215 "genital disc
development" evidence=TAS] [GO:0045705 "negative regulation of
salivary gland boundary specification" evidence=TAS] [GO:0048071
"sex-specific pigmentation" evidence=TAS] [GO:0009997 "negative
regulation of cardioblast cell fate specification" evidence=IMP]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=IMP] [GO:0007484 "imaginal disc-derived
genitalia development" evidence=TAS] [GO:0048066 "developmental
pigmentation" evidence=NAS] [GO:0007548 "sex differentiation"
evidence=NAS] [GO:0048087 "positive regulation of developmental
pigmentation" evidence=NAS] [GO:0007507 "heart development"
evidence=NAS] [GO:0007431 "salivary gland development"
evidence=NAS] [GO:0008584 "male gonad development" evidence=IMP]
[GO:0035263 "genital disc sexually dimorphic development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0035261 "external genitalia
morphogenesis" evidence=IMP] [GO:0030540 "female genitalia
development" evidence=IMP] [GO:0030539 "male genitalia development"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0048094
"male pigmentation" evidence=IDA] [GO:0007424 "open tracheal system
development" evidence=IMP] [GO:0007486 "imaginal disc-derived
female genitalia development" evidence=IMP] [GO:0060439 "trachea
morphogenesis" evidence=IMP] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE014297 GO:GO:0005634 GO:GO:0007280 GO:GO:0007507
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:U31961 GO:GO:0035225
GO:GO:0035224 GO:GO:0007506 GO:GO:0007494 EMBL:M21173 EMBL:X16134
EMBL:X51663 EMBL:X15080 PIR:A32584 PIR:A34220 PIR:B24780
RefSeq:NP_524896.2 RefSeq:NP_650577.1 RefSeq:NP_732180.1
RefSeq:NP_732181.1 RefSeq:NP_996220.1 UniGene:Dm.1763
ProteinModelPortal:P09087 SMR:P09087 DIP:DIP-19566N IntAct:P09087
MINT:MINT-307111 STRING:P09087 EnsemblMetazoa:FBtr0083384
GeneID:47763 KEGG:dme:Dmel_CG11648 CTD:47763 FlyBase:FBgn0000015
eggNOG:NOG286554 GeneTree:ENSGT00530000063388 InParanoid:P09087
KO:K09300 OMA:THSTPTH OrthoDB:EOG43FFDK PhylomeDB:P09087
GenomeRNAi:47763 NextBio:839106 Bgee:P09087 GermOnline:CG11648
GO:GO:0000980 GO:GO:0035261 GO:GO:0035263 GO:GO:0007486
GO:GO:0030539 GO:GO:0008584 GO:GO:0048094 GO:GO:0009997
GO:GO:0045705 GO:GO:0045843 GO:GO:0048087 GO:GO:0007431
GO:GO:0007385 GO:GO:0035277 GO:GO:0060439 Uniprot:P09087
Length = 493
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 6 FQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK 65
+ FQT+ L + + FN+ + + Q R LA++ L+ R V++WFQN+R K KK
Sbjct: 394 YSKFQTLEL-----EKEFLFNA----YVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
Query: 66 -IQRKAKQQEGDKSLDKEDSEPHIKQEPHS 94
QR+A QQ + + + Q+ HS
Sbjct: 445 NSQRQANQQNNNNNSSSNHNHAQATQQHHS 474
>UNIPROTKB|Q99626 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0001829 "trophectodermal cell
differentiation" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0060711 "labyrinthine layer development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0017053 GO:GO:0003714
GO:GO:0009952 GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 GO:GO:0001829 GO:GO:0000794
GO:GO:0008333 GO:GO:0035019 GO:GO:0001568 GO:GO:0000976
EMBL:AL591024 GO:GO:0060711 KO:K09312 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:Y13709 EMBL:U51096
EMBL:AJ278431 EMBL:AJ278432 EMBL:AJ278434 EMBL:AF007886
EMBL:AF007884 EMBL:AF007885 EMBL:BC014461 IPI:IPI00016928
PIR:PN0625 RefSeq:NP_001256.3 UniGene:Hs.174249 UniGene:Hs.740844
ProteinModelPortal:Q99626 SMR:Q99626 STRING:Q99626
PhosphoSite:Q99626 DMDM:311033469 PRIDE:Q99626 DNASU:1045
Ensembl:ENST00000381020 GeneID:1045 KEGG:hsa:1045 UCSC:uc001urv.3
CTD:1045 GeneCards:GC13M028536 HGNC:HGNC:1806 HPA:CAB002221
MIM:600297 neXtProt:NX_Q99626 PharmGKB:PA26352 eggNOG:NOG304047
InParanoid:Q99626 OMA:WMRKPTQ PhylomeDB:Q99626 GenomeRNAi:1045
NextBio:4381 Bgee:Q99626 CleanEx:HS_CDX2 Genevestigator:Q99626
GermOnline:ENSG00000165556 GO:GO:0045197 Uniprot:Q99626
Length = 313
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEP 92
T + + LA GLS R V++WFQN+RAK +KI +K QQ+ + + P +P
Sbjct: 212 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQP 270
>UNIPROTKB|P53410 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671 EMBL:L35568
IPI:IPI00574086 PIR:I50370 UniGene:Gga.790
ProteinModelPortal:P53410 SMR:P53410 Uniprot:P53410
Length = 319
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDK-SLDKEDSEPHIKQE 91
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK SL P +
Sbjct: 179 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKTSLQGLTGTPLVAGS 238
Query: 92 P 92
P
Sbjct: 239 P 239
>UNIPROTKB|O95076 [details] [associations]
symbol:ALX3 "Homeobox protein aristaless-like 3"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 EMBL:CH471122
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
GO:GO:0048704 EMBL:AF008202 EMBL:AF008203 EMBL:AL160006
EMBL:BC112007 EMBL:BC113428 IPI:IPI00028290 RefSeq:NP_006483.2
UniGene:Hs.669953 ProteinModelPortal:O95076 SMR:O95076
STRING:O95076 PhosphoSite:O95076 PRIDE:O95076
Ensembl:ENST00000369792 GeneID:257 KEGG:hsa:257 UCSC:uc001dzb.3
CTD:257 GeneCards:GC01M110602 H-InvDB:HIX0023725 H-InvDB:HIX0159682
HGNC:HGNC:449 MIM:136760 MIM:606014 neXtProt:NX_O95076 Orphanet:250
PharmGKB:PA24754 eggNOG:NOG292934 HOVERGEN:HBG004213
InParanoid:O95076 KO:K09323 OMA:PYSHPHG OrthoDB:EOG40K810
PhylomeDB:O95076 GenomeRNAi:257 NextBio:1013 Bgee:O95076
CleanEx:HS_ALX3 Genevestigator:O95076 GermOnline:ENSG00000156150
GO:GO:0007389 Uniprot:O95076
Length = 343
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 160 FSTFQLEELEKVFQKTHY----PD---VYAREQLALRTDLTEARVQVWFQNRRAKWRKRE 212
Query: 68 RKAKQQEG 75
R K QEG
Sbjct: 213 RYGKIQEG 220
>RGD|1359270 [details] [associations]
symbol:Alx3 "ALX homeobox 3" species:10116 "Rattus norvegicus"
[GO:0007389 "pattern specification process" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AY488087 RGD:1359270 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704 CTD:257
eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OrthoDB:EOG40K810
GO:GO:0007389 IPI:IPI00421290 RefSeq:NP_001007013.1
UniGene:Rn.18878 ProteinModelPortal:Q6RW14 SMR:Q6RW14 GeneID:365900
KEGG:rno:365900 InParanoid:Q6RW14 NextBio:688313
ArrayExpress:Q6RW14 Genevestigator:Q6RW14 Uniprot:Q6RW14
Length = 343
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 160 FSTFQLEELEKVFQKTHY----PD---VYAREQLALRTDLTEARVQVWFQNRRAKWRKRE 212
Query: 68 RKAKQQEG 75
R K QEG
Sbjct: 213 RYGKIQEG 220
>ZFIN|ZDB-GENE-980526-112 [details] [associations]
symbol:isl1 "islet1" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IGI;IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0055011 "atrial cardiac muscle cell differentiation"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-112 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0048665
GeneTree:ENSGT00700000104050 GO:GO:0031017 eggNOG:COG5576 CTD:3670
HOVERGEN:HBG004671 KO:K09370 EMBL:D21135 EMBL:AL954694
EMBL:BC060892 IPI:IPI00487340 PIR:I51739 RefSeq:NP_571037.1
UniGene:Dr.75106 ProteinModelPortal:P53405 SMR:P53405 STRING:P53405
Ensembl:ENSDART00000010896 GeneID:30147 KEGG:dre:30147
HOGENOM:HOG000236304 InParanoid:A2AWM5 OMA:TDMGDMG
OrthoDB:EOG4G4GQR NextBio:20806622 Bgee:P53405 GO:GO:0055011
GO:GO:0048936 Uniprot:P53405
Length = 349
Score = 99 (39.9 bits), Expect = 0.00015, P = 0.00015
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 21 LKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK---IQRKAKQQE-GD 76
L+T +N+ P ++E L + TGLS RV++VWFQN+R K KK + ++ +QQ+ D
Sbjct: 196 LRTCYNAN-P-RPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSILMKQLQQQQPND 253
Query: 77 KS-LDKEDSEPHIKQEP--HSEG 96
K+ + P + P H G
Sbjct: 254 KTNIQGMTGTPMVATSPERHDGG 276
>UNIPROTKB|E1BM60 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0021524
"visceral motor neuron differentiation" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
GO:GO:0031290 GO:GO:0021520 GO:GO:0021524 OMA:RHDSAVQ
EMBL:DAAA02052446 IPI:IPI00701951 UniGene:Bt.34422
Ensembl:ENSBTAT00000022147 NextBio:20928153 Uniprot:E1BM60
Length = 359
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDK-SLDKEDSEPHIKQE 91
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK SL P +
Sbjct: 220 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHNDKTSLQGLTGTPLVAGS 279
Query: 92 P 92
P
Sbjct: 280 P 280
>UNIPROTKB|Q96A47 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0021524 "visceral motor
neuron differentiation" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=TAS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0048666 "neuron development" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:CH471136 GO:GO:0031290
GO:GO:0048935 eggNOG:COG5576 GO:GO:0021520 HOVERGEN:HBG004671
KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR GO:GO:0021524
OMA:RHDSAVQ EMBL:AK001022 EMBL:BC011967 EMBL:BC012136
IPI:IPI00059240 RefSeq:NP_665804.1 UniGene:Hs.444677
ProteinModelPortal:Q96A47 SMR:Q96A47 STRING:Q96A47
PhosphoSite:Q96A47 DMDM:20978495 PRIDE:Q96A47 DNASU:64843
Ensembl:ENST00000290759 GeneID:64843 KEGG:hsa:64843 UCSC:uc002bbw.1
CTD:64843 GeneCards:GC15P076629 HGNC:HGNC:18524 MIM:609481
neXtProt:NX_Q96A47 PharmGKB:PA38566 InParanoid:Q96A47
PhylomeDB:Q96A47 GenomeRNAi:64843 NextBio:66950 Bgee:Q96A47
CleanEx:HS_ISL2 Genevestigator:Q96A47 GermOnline:ENSG00000159556
Uniprot:Q96A47
Length = 359
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDK-SLDKEDSEPHIKQE 91
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK SL P +
Sbjct: 220 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKTSLQGLTGTPLVAGS 279
Query: 92 P 92
P
Sbjct: 280 P 280
>MGI|MGI:109156 [details] [associations]
symbol:Isl2 "insulin related protein 2 (islet 2)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021524 "visceral motor neuron differentiation"
evidence=IGI;IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IGI;IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 MGI:MGI:109156
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 EMBL:CH466522 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 OMA:RHDSAVQ CTD:64843 EMBL:AK013964
EMBL:AC116699 IPI:IPI00110854 RefSeq:NP_081673.2 UniGene:Mm.273996
PDB:3MMK PDBsum:3MMK ProteinModelPortal:Q9CXV0 STRING:Q9CXV0
PhosphoSite:Q9CXV0 PRIDE:Q9CXV0 DNASU:104360
Ensembl:ENSMUST00000034869 GeneID:104360 KEGG:mmu:104360
UCSC:uc009psm.1 InParanoid:Q9CXV0 NextBio:356992 CleanEx:MM_ISL2
Genevestigator:Q9CXV0 GermOnline:ENSMUSG00000032318 Uniprot:Q9CXV0
Length = 359
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDK-SLDKEDSEPHIKQE 91
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK SL P +
Sbjct: 220 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKASLQGLTGTPLVAGS 279
Query: 92 P 92
P
Sbjct: 280 P 280
>ZFIN|ZDB-GENE-980526-562 [details] [associations]
symbol:isl2a "islet2a" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IGI;IMP] [GO:0048665 "neuron fate specification"
evidence=IGI;IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-562 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0048665 GeneTree:ENSGT00700000104050
GO:GO:0048676 eggNOG:COG5576 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38453 EMBL:X88805
EMBL:U09403 IPI:IPI00483445 PIR:I51734 RefSeq:NP_571045.1
UniGene:Dr.281 ProteinModelPortal:P53406 SMR:P53406
Ensembl:ENSDART00000012862 GeneID:30157 KEGG:dre:30157 CTD:30157
InParanoid:P53406 OMA:RHDSAVQ NextBio:20806628 ArrayExpress:P53406
Bgee:P53406 Uniprot:P53406
Length = 359
Score = 99 (39.9 bits), Expect = 0.00016, P = 0.00016
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 21 LKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGD 76
L+T +N+ P ++E L + TGLS RV++VWFQN+R K KK +++ +QQ D
Sbjct: 206 LRTCYNAN-P-RPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHND 263
Query: 77 KS 78
K+
Sbjct: 264 KT 265
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 20 KLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK 65
+LK F + + T Q R+ALA++ GL+ +++WFQN+RAK+KK
Sbjct: 157 RLKAEFQTS--RYITEQRRQALARELGLNESQIKIWFQNKRAKIKK 200
>UNIPROTKB|E1BUB0 [details] [associations]
symbol:Gga.17712 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 IPI:IPI00679968 EMBL:AADN02024688
EMBL:AADN02024689 EMBL:AADN02024690 Ensembl:ENSGALT00000030871
ArrayExpress:E1BUB0 Uniprot:E1BUB0
Length = 3532
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2834 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2889
Query: 65 KIQ 67
K +
Sbjct: 2890 KFK 2892
Score = 36 (17.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 64 KKIQRKAKQQEGDKSLDKEDSEPHIKQE 91
++ ++++K+ E +++K + IK+E
Sbjct: 3094 QQTEQQSKESEKKNTINKPNKVKKIKEE 3121
>UNIPROTKB|O73590 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 eggNOG:NOG301069
HOGENOM:HOG000155777 HOVERGEN:HBG050606 OrthoDB:EOG4Z0B4P
EMBL:U26150 IPI:IPI00679968 UniGene:Gga.54907 UniGene:Gga.55112
UniGene:Gga.56109 ProteinModelPortal:O73590 SMR:O73590
NextBio:20815969 Uniprot:O73590
Length = 3573
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2875 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2930
Query: 65 KIQ 67
K +
Sbjct: 2931 KFK 2933
Score = 36 (17.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 64 KKIQRKAKQQEGDKSLDKEDSEPHIKQE 91
++ ++++K+ E +++K + IK+E
Sbjct: 3135 QQTEQQSKESEKKNTINKPNKVKKIKEE 3162
>UNIPROTKB|F1ND08 [details] [associations]
symbol:Gga.17712 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:AADN02024688
EMBL:AADN02024689 EMBL:AADN02024690 IPI:IPI00811326
Ensembl:ENSGALT00000025275 ArrayExpress:F1ND08 Uniprot:F1ND08
Length = 3578
Score = 103 (41.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2880 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2935
Query: 65 KIQ 67
K +
Sbjct: 2936 KFK 2938
Score = 36 (17.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 64 KKIQRKAKQQEGDKSLDKEDSEPHIKQE 91
++ ++++K+ E +++K + IK+E
Sbjct: 3140 QQTEQQSKESEKKNTINKPNKVKKIKEE 3167
>UNIPROTKB|F1M7G8 [details] [associations]
symbol:Cdx2 "Protein Cdx2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:621234 GO:GO:0017053 GO:GO:0003714 GO:GO:0009952 GO:GO:0045597
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001829 GO:GO:0000794 GO:GO:0008333 GO:GO:0035019
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 GO:GO:0045197
IPI:IPI00192410 Ensembl:ENSRNOT00000048188 Uniprot:F1M7G8
Length = 239
Score = 98 (39.6 bits), Expect = 0.00019, P = 0.00019
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA GLS R V++WFQN+RAK +KI +K QQ+
Sbjct: 140 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQ 180
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 96 (38.9 bits), Expect = 0.00020, P = 0.00020
Identities = 33/88 (37%), Positives = 41/88 (46%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE--PHS 94
VRE LA+ LS VQVWFQN+RAK ++ +R L E I+Q P
Sbjct: 45 VREELARRVNLSEARVQVWFQNRRAKFRRNERAMLANRSASLLKSYSQEAAIEQPMAPRP 104
Query: 95 EGES-EWVSLDWRSSVQSPVGDKKKSSS 121
S E++S W SS SP SS
Sbjct: 105 TALSPEYLS--WSSS--SPYSTVPSYSS 128
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 96 (38.9 bits), Expect = 0.00020, P = 0.00020
Identities = 33/88 (37%), Positives = 41/88 (46%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE--PHS 94
VRE LA+ LS VQVWFQN+RAK ++ +R L E I+Q P
Sbjct: 45 VREELARRVNLSEARVQVWFQNRRAKFRRNERAMLANRSASLLKSYSQEAAIEQPMAPRP 104
Query: 95 EGES-EWVSLDWRSSVQSPVGDKKKSSS 121
S E++S W SS SP SS
Sbjct: 105 TALSPEYLS--WSSS--SPYSTVPSYSS 128
>ZFIN|ZDB-GENE-990415-22 [details] [associations]
symbol:dharma "dharma" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045743 "positive regulation of fibroblast growth
factor receptor signaling pathway" evidence=IGI] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:2000223
"regulation of BMP signaling pathway involved in heart jogging"
evidence=IMP] [GO:0003143 "embryonic heart tube morphogenesis"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0014028
"notochord formation" evidence=IMP] [GO:0060061 "Spemann organizer
formation" evidence=IMP] [GO:0048320 "axial mesoderm formation"
evidence=IMP] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0003140 "determination of left/right asymmetry in
lateral mesoderm" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-22 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001947 GO:GO:0000976
GO:GO:0009880 GO:GO:0048320 GO:GO:0003140 GO:GO:2000223
GO:GO:0014028 GO:GO:0045743 HSSP:P06601 GO:GO:0060061
eggNOG:NOG301263 EMBL:AF098202 EMBL:BC122095 EMBL:AB010103
IPI:IPI00507400 RefSeq:NP_571054.1 UniGene:Dr.75841 STRING:O93236
GeneID:30170 KEGG:dre:30170 CTD:30170 HOVERGEN:HBG105660
OrthoDB:EOG49KFST NextBio:20806638 Uniprot:O93236
Length = 192
Score = 97 (39.2 bits), Expect = 0.00021, P = 0.00021
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 32 HKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSL-DKEDSE 85
+ T + R LA++TGLS V+VWF+N+RA+ K+ Q + +++L D ++S+
Sbjct: 139 YPTVETRAELAQNTGLSEETVRVWFKNRRARRKR-QTTCADKHANRALEDHQESD 192
>WB|WBGene00015651 [details] [associations]
symbol:ceh-53 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104273 EMBL:FO080481 RefSeq:NP_500361.2
ProteinModelPortal:O44462 SMR:O44462 EnsemblMetazoa:C09G12.1
GeneID:182467 KEGG:cel:CELE_C09G12.1 UCSC:C09G12.1 CTD:182467
WormBase:C09G12.1 eggNOG:NOG294773 HOGENOM:HOG000020500
InParanoid:O44462 OMA:IITWTPG NextBio:917686 Uniprot:O44462
Length = 194
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 21 LKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE---GDK 77
L+ +F C + Q RE L K T L+ +QVWF+N+RAK +K QR ++
Sbjct: 37 LEEAFLKC--QYPDVQQRETLGKQTELAEARIQVWFKNRRAKARKRQRNESTDSCSTTEE 94
Query: 78 SLDKEDSEPHIKQEPHSE 95
S ++ D++ +K++ +E
Sbjct: 95 SNEEGDADGCLKKKAKNE 112
>UNIPROTKB|F1P7I2 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:AAEX03004725 EMBL:AAEX03004724
Ensembl:ENSCAFT00000031481 Uniprot:F1P7I2
Length = 254
Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 9 FQTIRLLNL-KVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
F T +L L KV KT + P RE LA T L+ VQVWFQN+RAK +K +
Sbjct: 71 FSTFQLEELEKVFQKTHY----PD---VYAREQLALRTDLTEARVQVWFQNRRAKWRKRE 123
Query: 68 RKAKQQEG 75
R K QEG
Sbjct: 124 RFGKIQEG 131
>UNIPROTKB|E1BPV9 [details] [associations]
symbol:LOC510844 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005739 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 KO:K09378 OMA:SMDAMEI
EMBL:DAAA02046727 EMBL:DAAA02046728 EMBL:DAAA02046729
EMBL:DAAA02046730 EMBL:DAAA02046731 EMBL:DAAA02046732
IPI:IPI00699406 RefSeq:XP_003583442.1 RefSeq:XP_003587277.1
Ensembl:ENSBTAT00000019489 GeneID:510844 KEGG:bta:510844
Uniprot:E1BPV9
Length = 3695
Score = 109 (43.4 bits), Expect = 0.00022, P = 0.00022
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 QNFQTIRLLNLKVK-LKTSFNSCCPGHKT-TQVR-EALAKDTGLSVRVVQVWFQNQRAKM 63
+ F+T ++ NL++K LK+ FN ++T T + E L D GL RVVQVWFQN RAK
Sbjct: 2948 KRFRT-QMTNLQLKVLKSCFND----YRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKE 3002
Query: 64 KK 65
KK
Sbjct: 3003 KK 3004
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 91 (37.1 bits), Expect = 0.00022, P = 0.00022
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 13 RLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 72
R L+++ + FN + +V AL GL+ R V++WFQN+R K KK K K
Sbjct: 4 RYQTLELEKEFLFNPYLTRKRRIEVSHAL----GLTERQVKIWFQNRRMKWKKENNKDKF 59
Query: 73 QEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRS-SVQSP 112
K +E + +++ P + E + D ++ SVQ P
Sbjct: 60 PSS-KCEQEELEKQKLERAPEAADEGDAQKGDKKNGSVQGP 99
>UNIPROTKB|E2QXS9 [details] [associations]
symbol:HHEX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0071103 "DNA conformation change"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0070365 "hepatocyte differentiation"
evidence=IEA] [GO:0061017 "hepatoblast differentiation"
evidence=IEA] [GO:0061011 "hepatic duct development" evidence=IEA]
[GO:0061010 "gall bladder development" evidence=IEA] [GO:0061009
"common bile duct development" evidence=IEA] [GO:0060431 "primary
lung bud formation" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0034504 "protein localization to nucleus"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0031016 "pancreas development" evidence=IEA] [GO:0030878
"thyroid gland development" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0030177 "positive regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0022027
"interkinetic nuclear migration" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0008301 "DNA
binding, bending" evidence=IEA] [GO:0008190 "eukaryotic initiation
factor 4E binding" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002573 "myeloid leukocyte differentiation" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007165 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122
GO:GO:0008301 GO:GO:0044212 GO:GO:0007049 GO:GO:0030183
GO:GO:0035264 GO:GO:0001570 GO:GO:0031016 GO:GO:0007492
GO:GO:0070365 GO:GO:0030177 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 KO:K08024 OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:AAEX03015414 RefSeq:XP_850204.1
Ensembl:ENSCAFT00000012018 GeneID:608175 KEGG:cfa:608175
NextBio:20893846 Uniprot:E2QXS9
Length = 270
Score = 98 (39.6 bits), Expect = 0.00025, P = 0.00025
Identities = 35/120 (29%), Positives = 56/120 (46%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 142 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 192
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSV 122
++++++ Q + L+ D+ +Q+ SE +LD SP + S +
Sbjct: 193 WRRLKQENPQSNKKEELESLDNPCDQRQDLSSEQNKG--ALDSSQCSPSPASQEDLESEI 250
>UNIPROTKB|F1P2M4 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0001829 "trophectodermal cell
differentiation" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0060711 "labyrinthine layer development"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0017053
GO:GO:0003714 GO:GO:0030154 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0000794
GO:GO:0008333 GO:GO:0000976 GO:GO:0045197 EMBL:AADN02005196
EMBL:AADN02005197 IPI:IPI00576909 Ensembl:ENSGALT00000027613
Uniprot:F1P2M4
Length = 274
Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQ 73
T + + LA GLS R V++WFQN+RAK +KI +K QQ
Sbjct: 204 TIRRKAELASSLGLSERQVKIWFQNRRAKERKINKKKLQQ 243
>ZFIN|ZDB-GENE-000223-14 [details] [associations]
symbol:phox2a "paired-like homeobox 2a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007420 "brain development" evidence=IGI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000223-14 GO:GO:0005634
GO:GO:0007420 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104256 EMBL:CU633849
IPI:IPI00511129 Ensembl:ENSDART00000002384 Bgee:F1RCT9
Uniprot:F1RCT9
Length = 280
Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGE 97
RE LA L+ VQVWFQN+RAK +K +R A + S K+ S+ E E
Sbjct: 122 REELALKIDLTEARVQVWFQNRRAKFRKQERAANSKASSSSGGKKPSDARSSSEDDESKE 181
Query: 98 S 98
S
Sbjct: 182 S 182
>ZFIN|ZDB-GENE-070530-3 [details] [associations]
symbol:zfhx4 "zinc finger homeobox 4" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 ZFIN:ZDB-GENE-070530-3 GO:GO:0005634
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717
KO:K09380 EMBL:CR361560 EMBL:CT573302 IPI:IPI00616360
RefSeq:XP_684360.5 Ensembl:ENSDART00000112256
Ensembl:ENSDART00000135846 GeneID:556453 KEGG:dre:556453
NextBio:20881493 Uniprot:E7FCF7
Length = 3528
Score = 103 (41.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2833 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2888
Query: 65 KIQ 67
K +
Sbjct: 2889 KFK 2891
Score = 34 (17.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 67 QRKAKQQEGDKSLDKEDSEPHIKQ 90
++ K+ E DK L+K P +K+
Sbjct: 3089 EQHIKESEKDKKLEK----PKVKE 3108
>UNIPROTKB|E2R4S1 [details] [associations]
symbol:ZFHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:AAEX03015884
EMBL:AAEX03015882 EMBL:AAEX03015883 Ensembl:ENSCAFT00000013195
Uniprot:E2R4S1
Length = 3623
Score = 103 (41.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2938 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2993
Query: 65 KIQ 67
K +
Sbjct: 2994 KFK 2996
Score = 34 (17.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 69 KAKQQEGDKSLDKEDSEPHIKQEPHSEGESE 99
+A + + DKS E ++ + EP S S+
Sbjct: 3370 EASETKEDKSTATESTKEEPQLEPKSADFSD 3400
Score = 33 (16.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 67 QRKAKQQEGDKSLDKEDSEPHIKQE 91
Q + + +E +K K + IK+E
Sbjct: 3189 QTELQSKESEKKQSKPNKVKKIKEE 3213
>UNIPROTKB|F1RSU9 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0017053 GO:GO:0003714
GO:GO:0009952 GO:GO:0045597 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 KO:K09312 CTD:1045 OMA:WMRKPTQ
GO:GO:0045197 EMBL:CU861636 RefSeq:XP_003130956.2 UniGene:Ssc.24504
UniGene:Ssc.84655 Ensembl:ENSSSCT00000010207 GeneID:100127132
KEGG:ssc:100127132 ArrayExpress:F1RSU9 Uniprot:F1RSU9
Length = 311
Score = 98 (39.6 bits), Expect = 0.00032, P = 0.00032
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + + LA GLS R V++WFQN+RAK +KI +K QQ+
Sbjct: 212 TIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQQ 252
>FB|FBgn0085369 [details] [associations]
symbol:CG34340 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048813 GO:GO:0007517
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
RefSeq:NP_001097075.2 UniGene:Dm.12203 ProteinModelPortal:A8DYQ2
SMR:A8DYQ2 GeneID:5740176 KEGG:dme:Dmel_CG34340 FlyBase:FBgn0085369
InParanoid:A8DYQ2 OrthoDB:EOG4NGF3W PhylomeDB:A8DYQ2
GenomeRNAi:5740176 NextBio:20891216 Bgee:A8DYQ2 Uniprot:A8DYQ2
Length = 607
Score = 99 (39.9 bits), Expect = 0.00034, P = 0.00034
Identities = 40/118 (33%), Positives = 54/118 (45%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKI 66
+N T L L+ +L+T+F + RE LA L+ VQVWFQN+RAK +K
Sbjct: 74 RNRTTFTLQQLE-ELETAFAQT--HYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKA 130
Query: 67 ------QRKAKQQEGDKSLDK-EDSEPHIKQEPHSEGE--SEWVSLDWRSSVQSPVGD 115
QRK + E SLDK DS + P GE + L R SP+ +
Sbjct: 131 ERLKDEQRKRENGESSSSLDKLHDSR---ESSPDITGEIDDDMDDLPPRQRSHSPLAN 185
>ZFIN|ZDB-GENE-000710-6 [details] [associations]
symbol:mxtx2 "mix-type homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060027 "convergent extension
involved in gastrulation" evidence=IMP] [GO:0007015 "actin filament
organization" evidence=IMP] [GO:0055113 "epiboly involved in
gastrulation with mouth forming second" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IMP] [GO:0007369 "gastrulation" evidence=IGI;IMP]
[GO:0042074 "cell migration involved in gastrulation" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-000710-6 GO:GO:0005634 GO:GO:0007015
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042074 GO:GO:0055113 GO:GO:0060027 GO:GO:0001706
HOGENOM:HOG000234712 EMBL:BC094996 IPI:IPI00817491 STRING:Q504J3
HOVERGEN:HBG098437 InParanoid:Q504J3 ArrayExpress:Q504J3
Bgee:Q504J3 Uniprot:Q504J3
Length = 318
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 36/102 (35%), Positives = 48/102 (47%)
Query: 21 LKTSFN-SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSL 79
LK +FN PG VRE+L++ TGL +QVWFQN+RA+ K +A Q L
Sbjct: 59 LKMAFNVDPYPG---ISVRESLSQATGLPESRIQVWFQNKRARTLK--NRAIQSS--PQL 111
Query: 80 DKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSS 121
D + P PH S VS R +SP + +S
Sbjct: 112 DNKSPLPSPFLPPHMA--SVGVSAQQRGIQESPFNIQMSQTS 151
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKI 66
+ ++ + + +++L+ F+ C + T + + LA + GLS R V+ WFQN+RAK +KI
Sbjct: 2 EKYRVVYTDHQRLELEKEFH--CNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKERKI 59
>UNIPROTKB|H7BYS6 [details] [associations]
symbol:H7BYS6 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC025287 ProteinModelPortal:H7BYS6 SMR:H7BYS6
Ensembl:ENST00000398113 Bgee:H7BYS6 Uniprot:H7BYS6
Length = 150
Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE--PHSE 95
RE LAK+ G+ +QVWF+N R K +K+ K ++ D++ + S+ H+ QE P E
Sbjct: 29 REQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEK-DQTQGHDQSQ-HLTQEYLP-KE 85
Query: 96 GESEWVSLDW 105
+ + W
Sbjct: 86 ARQKQTFITW 95
>UNIPROTKB|H0YFN1 [details] [associations]
symbol:H0YFN1 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC025287 ProteinModelPortal:H0YFN1 SMR:H0YFN1
Ensembl:ENST00000538623 OMA:NKLVQAF Bgee:H0YFN1 Uniprot:H0YFN1
Length = 152
Score = 94 (38.1 bits), Expect = 0.00041, P = 0.00041
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQE--PHSE 95
RE LAK+ G+ +QVWF+N R K +K+ K ++ D++ + S+ H+ QE P E
Sbjct: 44 REQLAKEIGVPESNIQVWFKNYRVKQRKLDYKCFSEK-DQTQGHDQSQ-HLTQEYLP-KE 100
Query: 96 GESEWVSLDW 105
+ + W
Sbjct: 101 ARQKQTFITW 110
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 20 KLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK 65
+LK F + + T Q R++LA++ L+ +++WFQN+RAK+KK
Sbjct: 17 RLKAEFQA--NRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIKK 60
>UNIPROTKB|D6RAK3 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HGNC:HGNC:6132 EMBL:AC010478 IPI:IPI00966565
Ensembl:ENST00000505475 Bgee:D6RAK3 Uniprot:D6RAK3
Length = 260
Score = 97 (39.2 bits), Expect = 0.00045, P = 0.00045
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 146 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 190
>ZFIN|ZDB-GENE-980526-40 [details] [associations]
symbol:eng2b "engrailed 2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
Length = 261
Score = 97 (39.2 bits), Expect = 0.00045, P = 0.00045
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 20 KLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKK 65
+LK F + + T Q R+ALA++ GL+ +++WFQN+RAK+KK
Sbjct: 186 RLKNEFQN--NRYLTEQRRQALAQELGLNESQIKIWFQNKRAKIKK 229
>ZFIN|ZDB-GENE-090313-51 [details] [associations]
symbol:phox2ba "paired-like homeobox 2ba"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-090313-51 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 eggNOG:NOG301263 EMBL:BX323984
IPI:IPI00923759 RefSeq:NP_001139175.1 UniGene:Dr.161702
Ensembl:ENSDART00000110517 Ensembl:ENSDART00000141795 GeneID:795258
CTD:795258 HOVERGEN:HBG106787 OMA:SWNESSS NextBio:20932169
Uniprot:B8A4X8
Length = 155
Score = 94 (38.1 bits), Expect = 0.00046, P = 0.00046
Identities = 33/86 (38%), Positives = 42/86 (48%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGE 97
RE L ++ L+ VQVWFQN+RAK +K +R A E S K S P S
Sbjct: 43 REELVQEIQLTEARVQVWFQNRRAKFRKQERAASWNE---SSSKTHSSP-------SHDS 92
Query: 98 SEWVSLDWRSSVQS--P-VGDKKKSS 120
SE S S Q P +GD+K+ S
Sbjct: 93 SETASATDPDSTQPSLPLIGDQKQDS 118
>UNIPROTKB|H2L2F8 [details] [associations]
symbol:ceh-27 "Protein CEH-27, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043565 GO:GO:0010171
GO:GO:0000003 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000981 GO:GO:0034243
GeneTree:ENSGT00700000104098 EMBL:Z81085 RefSeq:NP_001256349.1
ProteinModelPortal:H2L2F8 SMR:H2L2F8 EnsemblMetazoa:F46F3.1b
GeneID:185853 KEGG:cel:CELE_F46F3.1 CTD:185853 WormBase:F46F3.1b
Uniprot:H2L2F8
Length = 170
Score = 95 (38.5 bits), Expect = 0.00047, P = 0.00047
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGD--KSLDKE-DSE 85
RE LAK LS V++WFQNQR K K+ Q K K+ +G + D++ DS+
Sbjct: 35 RENLAKSINLSATQVKIWFQNQRYKCKR-QEKEKKMDGGCYRDSDRDTDSD 84
>UNIPROTKB|F1N959 [details] [associations]
symbol:F1N959 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02072754 EMBL:AADN02072755
EMBL:AADN02072756 EMBL:AADN02072757 EMBL:AADN02072758
IPI:IPI00819883 Ensembl:ENSGALT00000024015 ArrayExpress:F1N959
Uniprot:F1N959
Length = 303
Score = 97 (39.2 bits), Expect = 0.00060, P = 0.00060
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 162 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 206
>UNIPROTKB|I3LKM5 [details] [associations]
symbol:HESX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048853 "forebrain
morphogenesis" evidence=IEA] [GO:0047485 "protein N-terminus
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
KO:K09354 GO:GO:0030916 GO:GO:0043584 GeneTree:ENSGT00700000104128
GO:GO:0048853 OMA:PWADTCS RefSeq:XP_003361214.1
Ensembl:ENSSSCT00000031271 GeneID:100623612 KEGG:ssc:100623612
Uniprot:I3LKM5
Length = 185
Score = 95 (38.5 bits), Expect = 0.00064, P = 0.00064
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 27 SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDKE 82
+C PG +RE LA+ L +Q+WFQN+RAK+K+ R+++ KS + +
Sbjct: 130 NCYPG---IDIREDLARKLNLEEDRIQIWFQNRRAKLKRSHRESQFLMAKKSFNTD 182
>MGI|MGI:96071 [details] [associations]
symbol:Hesx1 "homeobox gene expressed in ES cells"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=NAS] [GO:0030916 "otic vesicle formation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043584 "nose development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0048853
"forebrain morphogenesis" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:96071 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008134
CTD:8820 eggNOG:NOG326168 HOGENOM:HOG000112889 HOVERGEN:HBG004226
KO:K09354 EMBL:AC124603 GO:GO:0030916 GO:GO:0043584
GeneTree:ENSGT00700000104128 GO:GO:0048853 OMA:PWADTCS
OrthoDB:EOG46T32J EMBL:X80040 EMBL:U40720 EMBL:AK082831
EMBL:BC132051 EMBL:BC132053 EMBL:BC145262 IPI:IPI00123659
IPI:IPI00310700 PIR:A55882 RefSeq:NP_034550.2 UniGene:Mm.4802
ProteinModelPortal:Q61658 STRING:Q61658 PRIDE:Q61658
Ensembl:ENSMUST00000035433 GeneID:15209 KEGG:mmu:15209
InParanoid:Q61658 NextBio:287773 CleanEx:MM_HESX1
Genevestigator:Q61658 GermOnline:ENSMUSG00000040726 Uniprot:Q61658
Length = 185
Score = 95 (38.5 bits), Expect = 0.00064, P = 0.00064
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 27 SCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAK 71
+C PG +RE LA+ L +Q+WFQN+RAKMK+ +R+++
Sbjct: 130 NCYPG---IDIREDLAQKLNLEEDRIQIWFQNRRAKMKRSRRESQ 171
>WB|WBGene00003167 [details] [associations]
symbol:mec-3 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IMP] [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0009612 "response to mechanical stimulus" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016358 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0001190 GO:GO:0000977
GeneTree:ENSGT00700000104050 GO:GO:0007638 eggNOG:NOG257130
EMBL:L02877 EMBL:M20244 EMBL:Z81054 PIR:S28390 PIR:T20458
RefSeq:NP_001023111.1 RefSeq:NP_001023112.1 UniGene:Cel.19754
ProteinModelPortal:P09088 SMR:P09088 STRING:P09088 PaxDb:P09088
EnsemblMetazoa:F01D4.6a GeneID:177938 KEGG:cel:CELE_F01D4.6
UCSC:F01D4.6a CTD:177938 WormBase:F01D4.6a WormBase:F01D4.6b
HOGENOM:HOG000064530 InParanoid:P09088 KO:K09376 OMA:VIDSIGV
NextBio:899038 ArrayExpress:P09088 Uniprot:P09088
Length = 321
Score = 97 (39.2 bits), Expect = 0.00066, P = 0.00066
Identities = 17/30 (56%), Positives = 26/30 (86%)
Query: 38 REALAKDTGLSVRVVQVWFQNQRAKMKKIQ 67
R LA +TGLS+RV+QVWFQN+R+K ++++
Sbjct: 247 RAKLALETGLSMRVIQVWFQNRRSKERRLK 276
>UNIPROTKB|D6RBJ1 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HOGENOM:HOG000236304 HGNC:HGNC:6132
EMBL:AC010478 IPI:IPI00966899 ProteinModelPortal:D6RBJ1 SMR:D6RBJ1
Ensembl:ENST00000511384 ArrayExpress:D6RBJ1 Bgee:D6RBJ1
Uniprot:D6RBJ1
Length = 326
Score = 97 (39.2 bits), Expect = 0.00068, P = 0.00068
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>UNIPROTKB|E1BWH2 [details] [associations]
symbol:E1BWH2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0003139 "secondary heart field specification"
evidence=IEA] [GO:0003148 "outflow tract septum morphogenesis"
evidence=IEA] [GO:0003203 "endocardial cushion morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0021524 "visceral motor neuron differentiation"
evidence=IEA] [GO:0021559 "trigeminal nerve development"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0032725 "positive regulation of granulocyte macrophage
colony-stimulating factor production" evidence=IEA] [GO:0032729
"positive regulation of interferon-gamma production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0048880 "sensory system development"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0050728 "negative regulation of
inflammatory response" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0060379 "cardiac
muscle cell myoblast differentiation" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060413 "atrial septum
morphogenesis" evidence=IEA] [GO:0060913 "cardiac cell fate
determination" evidence=IEA] [GO:0071657 "positive regulation of
granulocyte colony-stimulating factor production" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0043524
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0090090 GO:GO:0001105
GO:GO:0001158 GO:GO:0042517 GeneTree:ENSGT00700000104050
GO:GO:0043388 GO:GO:0003266 IPI:IPI00598855 OMA:TDMGDMG
EMBL:AADN02072754 EMBL:AADN02072755 EMBL:AADN02072756
EMBL:AADN02072757 EMBL:AADN02072758 Ensembl:ENSGALT00000038907
ArrayExpress:E1BWH2 Uniprot:E1BWH2
Length = 339
Score = 97 (39.2 bits), Expect = 0.00072, P = 0.00072
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 200 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 244
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + R ++K L+ R V++WFQN+R K+KK+ R+ + +E
Sbjct: 47 TRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRENRIRE 87
>UNIPROTKB|P50211 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:L35567
IPI:IPI00598855 PIR:I50369 RefSeq:NP_990745.1 UniGene:Gga.1507
ProteinModelPortal:P50211 SMR:P50211 GeneID:396383 KEGG:gga:396383
CTD:3670 HOVERGEN:HBG004671 KO:K09370 NextBio:20816425
Uniprot:P50211
Length = 349
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>UNIPROTKB|A6H796 [details] [associations]
symbol:ISL1 "ISL1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148
GO:GO:0003215 GO:GO:0060384 GO:GO:0021520 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:DAAA02050419 EMBL:BC146163
IPI:IPI00854388 RefSeq:NP_001092600.1 UniGene:Bt.28168 SMR:A6H796
STRING:A6H796 Ensembl:ENSBTAT00000001638 GeneID:614040
KEGG:bta:614040 InParanoid:A6H796 NextBio:20898906 Uniprot:A6H796
Length = 349
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>UNIPROTKB|P61371 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003266 "regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031103 "axon regeneration"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISS] [GO:0010575 "positive
regulation vascular endothelial growth factor production"
evidence=ISS] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=ISS] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0071657
"positive regulation of granulocyte colony-stimulating factor
production" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0048762 "mesenchymal cell differentiation" evidence=ISS]
[GO:0031016 "pancreas development" evidence=ISS] [GO:1901258
"positive regulation of macrophage colony-stimulating factor
production" evidence=ISS] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=ISS] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=ISS] [GO:0048665 "neuron fate
specification" evidence=ISS] [GO:0021559 "trigeminal nerve
development" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0048880 "sensory system
development" evidence=ISS] [GO:0060384 "innervation" evidence=ISS]
[GO:0060413 "atrial septum morphogenesis" evidence=ISS] [GO:0060037
"pharyngeal system development" evidence=ISS] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=ISS]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0003148
"outflow tract septum morphogenesis" evidence=ISS] [GO:0003139
"secondary heart field specification" evidence=IMP] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0060913 "cardiac cell fate
determination" evidence=IDA] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=ISS] [GO:0032024 "positive
regulation of insulin secretion" evidence=IC] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=ISS]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=ISS] [GO:0030331 "estrogen receptor
binding" evidence=ISS] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0050728 GO:GO:0008270 GO:GO:0071385 GO:GO:0045665
GO:GO:0043524 GO:GO:0032755 GO:GO:0010575 GO:GO:0032024
GO:GO:0003700 GO:GO:0045766 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0060037 GO:GO:0090090 GO:GO:0032731 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0030331 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0048665 GO:GO:0032729
GO:GO:0032760 GO:GO:0016922 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0048762 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0032730 GO:GO:0032735 GO:GO:0071657
GO:GO:0060413 GO:GO:0033147 GO:GO:0003266 eggNOG:COG5576
GO:GO:0003148 GO:GO:0003215 GO:GO:0060384 GO:GO:0021520
GO:GO:0032725 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
EMBL:S70721 EMBL:U07559 EMBL:BC031213 IPI:IPI00025071 PIR:I53277
RefSeq:NP_002193.2 UniGene:Hs.505 ProteinModelPortal:P61371
SMR:P61371 IntAct:P61371 STRING:P61371 PhosphoSite:P61371
DMDM:47606423 PRIDE:P61371 DNASU:3670 Ensembl:ENST00000230658
GeneID:3670 KEGG:hsa:3670 UCSC:uc003jor.3 GeneCards:GC05P050714
HGNC:HGNC:6132 MIM:600366 neXtProt:NX_P61371 PharmGKB:PA29932
InParanoid:P61371 PhylomeDB:P61371 GenomeRNAi:3670 NextBio:14363
ArrayExpress:P61371 Bgee:P61371 CleanEx:HS_ISL1
Genevestigator:P61371 GermOnline:ENSG00000016082 GO:GO:0060913
GO:GO:0060379 GO:GO:0090074 GO:GO:0048880 GO:GO:0021524
Uniprot:P61371
Length = 349
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>MGI|MGI:101791 [details] [associations]
symbol:Isl1 "ISL1 transcription factor, LIM/homeodomain"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO] [GO:0001755 "neural
crest cell migration" evidence=IGI] [GO:0003007 "heart
morphogenesis" evidence=IGI] [GO:0003139 "secondary heart field
specification" evidence=ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IGI] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IGI] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IGI] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IDA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021524 "visceral motor neuron
differentiation" evidence=IGI] [GO:0021559 "trigeminal nerve
development" evidence=IMP] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IGI;IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0032725 "positive regulation of granulocyte
macrophage colony-stimulating factor production" evidence=IDA]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IDA] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IDA] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0042517 "positive regulation of tyrosine phosphorylation of
Stat3 protein" evidence=IDA] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0045766 "positive regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IGI]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0048762
"mesenchymal cell differentiation" evidence=IMP] [GO:0048880
"sensory system development" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IMP] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IGI] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0060413 "atrial septum morphogenesis"
evidence=IGI] [GO:0060913 "cardiac cell fate determination"
evidence=ISO;IMP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IDA] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101791 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0001755 GO:GO:0050728
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0032755
GO:GO:0010575 GO:GO:0032024 GO:GO:0003700 GO:GO:0045766
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0032731
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0032729 GO:GO:0032760
GeneTree:ENSGT00700000104050 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0032730 GO:GO:0032735 GO:GO:0071657 GO:GO:0060413
GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 GO:GO:0032725 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:AJ132765 EMBL:AB104633
IPI:IPI00121604 IPI:IPI00415262 RefSeq:NP_067434.3 UniGene:Mm.42242
PDB:2RGT PDBsum:2RGT ProteinModelPortal:P61372 SMR:P61372
MINT:MINT-4594016 STRING:P61372 PhosphoSite:P61372 PRIDE:P61372
Ensembl:ENSMUST00000036060 Ensembl:ENSMUST00000176044 GeneID:16392
KEGG:mmu:16392 UCSC:uc007ryf.2 InParanoid:P61372
EvolutionaryTrace:P61372 NextBio:289537 Bgee:P61372 CleanEx:MM_ISL1
Genevestigator:P61372 GermOnline:ENSMUSG00000042258 Uniprot:P61372
Length = 349
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>RGD|61957 [details] [associations]
symbol:Isl1 "ISL LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA;ISO] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001755 "neural
crest cell migration" evidence=IEA;ISO] [GO:0003007 "heart
morphogenesis" evidence=ISO] [GO:0003139 "secondary heart field
specification" evidence=IEA;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA;ISO] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA;ISO] [GO:0003266 "regulation
of secondary heart field cardioblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007507 "heart development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA;ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IDA;IPI]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0021559 "trigeminal nerve
development" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031016 "pancreas development" evidence=IEA;ISO] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA;ISO] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032730 "positive
regulation of interleukin-1 alpha production" evidence=IEA;ISO]
[GO:0032731 "positive regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA;ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA;ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA;ISO]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042517 "positive regulation of
tyrosine phosphorylation of Stat3 protein" evidence=IEA;ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045766 "positive regulation
of angiogenesis" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048663 "neuron fate commitment" evidence=ISO] [GO:0048665
"neuron fate specification" evidence=ISO] [GO:0048762 "mesenchymal
cell differentiation" evidence=ISO] [GO:0048880 "sensory system
development" evidence=IEA;ISO] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060037 "pharyngeal system development" evidence=IEA;ISO]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA;ISO] [GO:0060384 "innervation" evidence=IEA;ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0071385 "cellular response to glucocorticoid stimulus"
evidence=IEP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA;ISO] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:61957 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0001755 GO:GO:0043565 GO:GO:0008270 GO:GO:0071385
GO:GO:0045944 GO:GO:0045665 GO:GO:0043524 GO:GO:0032024
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0030331
GO:GO:0021559 GO:GO:0001158 GO:GO:0042517
GeneTree:ENSGT00700000104050 GO:GO:0016922 GO:GO:0031103
GO:GO:0055010 GO:GO:0003203 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0060413 GO:GO:0033147 GO:GO:0003266
eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215 GO:GO:0060384
GO:GO:0021520 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
GO:GO:0060913 GO:GO:0060379 GO:GO:0090074 GO:GO:0048880
GO:GO:0021524 EMBL:S69329 EMBL:AY557632 EMBL:X53258 IPI:IPI00201439
IPI:IPI00417237 PIR:I67417 RefSeq:NP_059035.3 UniGene:Rn.36202
ProteinModelPortal:P61374 SMR:P61374 STRING:P61374
PhosphoSite:P61374 PRIDE:P61374 Ensembl:ENSRNOT00000017305
GeneID:64444 KEGG:rno:64444 InParanoid:P61374 NextBio:613174
Genevestigator:P61374 GermOnline:ENSRNOG00000012556 Uniprot:P61374
Length = 349
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 210 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 254
>UNIPROTKB|F1PP21 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:TDMGDMG EMBL:AAEX03003122
Ensembl:ENSCAFT00000029303 Uniprot:F1PP21
Length = 360
Score = 97 (39.2 bits), Expect = 0.00080, P = 0.00080
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 220 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 264
>RGD|621849 [details] [associations]
symbol:Isl2 "ISL LIM homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048663
"neuron fate commitment" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576 GO:GO:0021520
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR
GO:GO:0021524 CTD:64843 EMBL:L35571 IPI:IPI00198543 PIR:A55198
RefSeq:NP_065204.1 UniGene:Rn.10026 PDB:1BW5 PDBsum:1BW5
ProteinModelPortal:P50480 SMR:P50480 STRING:P50480 PRIDE:P50480
GeneID:57233 KEGG:rno:57233 UCSC:RGD:621849 InParanoid:P50480
EvolutionaryTrace:P50480 NextBio:611298 ArrayExpress:P50480
Genevestigator:P50480 GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 97 (39.2 bits), Expect = 0.00080, P = 0.00080
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDKS 78
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK+
Sbjct: 221 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKA 266
>UNIPROTKB|P50480 [details] [associations]
symbol:Isl2 "Insulin gene enhancer protein ISL-2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 CTD:64843 EMBL:L35571
IPI:IPI00198543 PIR:A55198 RefSeq:NP_065204.1 UniGene:Rn.10026
PDB:1BW5 PDBsum:1BW5 ProteinModelPortal:P50480 SMR:P50480
STRING:P50480 PRIDE:P50480 GeneID:57233 KEGG:rno:57233
UCSC:RGD:621849 InParanoid:P50480 EvolutionaryTrace:P50480
NextBio:611298 ArrayExpress:P50480 Genevestigator:P50480
GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 97 (39.2 bits), Expect = 0.00080, P = 0.00080
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQQEGDKS 78
++E L + TGLS RV++VWFQN+R K KK +++ +QQ DK+
Sbjct: 221 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKA 266
>UNIPROTKB|F1SMF7 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 OMA:TDMGDMG GO:GO:0048936 GO:GO:0060913
GO:GO:0060379 GO:GO:0048880 GO:GO:0021524 EMBL:CU915536
Ensembl:ENSSSCT00000018387 Uniprot:F1SMF7
Length = 361
Score = 97 (39.2 bits), Expect = 0.00080, P = 0.00080
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 37 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQEGDKSLDK 81
++E L + TGLS RV++VWFQN+R K KK KQ + + DK
Sbjct: 222 MKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMMKQLQQQQPNDK 266
>UNIPROTKB|A7YWK1 [details] [associations]
symbol:HHEX "HHEX protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive streak
formation" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0071103 "DNA conformation change" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070365 "hepatocyte differentiation" evidence=IEA] [GO:0061017
"hepatoblast differentiation" evidence=IEA] [GO:0061011 "hepatic
duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0061009 "common bile duct
development" evidence=IEA] [GO:0060431 "primary lung bud formation"
evidence=IEA] [GO:0048853 "forebrain morphogenesis" evidence=IEA]
[GO:0048568 "embryonic organ development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0034504 "protein localization to
nucleus" evidence=IEA] [GO:0032993 "protein-DNA complex"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0030878 "thyroid gland development" evidence=IEA] [GO:0030183
"B cell differentiation" evidence=IEA] [GO:0030177 "positive
regulation of Wnt receptor signaling pathway" evidence=IEA]
[GO:0022027 "interkinetic nuclear migration" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008190
"eukaryotic initiation factor 4E binding" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002573 "myeloid leukocyte
differentiation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0042127 GO:GO:0000122 GO:GO:0008301
GO:GO:0044212 GO:GO:0007049 GO:GO:0030183 GO:GO:0035264
GO:GO:0001570 GO:GO:0031016 GO:GO:0007492 GO:GO:0070365
GO:GO:0030177 eggNOG:NOG252905 GO:GO:0034504 GO:GO:0032993
GO:GO:0048568 GO:GO:0090009 GO:GO:0022027 GO:GO:0035050
GO:GO:0016973 GO:GO:0030878 GeneTree:ENSGT00680000099625
GO:GO:0048853 GO:GO:0061009 CTD:3087 HOGENOM:HOG000049110
HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W OMA:DNSCDQR
GO:GO:0071103 GO:GO:0061010 GO:GO:0061011 GO:GO:0061017
GO:GO:0002573 GO:GO:0060431 EMBL:DAAA02058821 EMBL:BC134632
IPI:IPI00712870 RefSeq:NP_001098894.1 UniGene:Bt.27920 SMR:A7YWK1
Ensembl:ENSBTAT00000018899 GeneID:539542 KEGG:bta:539542
InParanoid:A7YWK1 NextBio:20878060 Uniprot:A7YWK1
Length = 271
Score = 96 (38.9 bits), Expect = 0.00083, P = 0.00083
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 143 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 193
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPHSEGESEWVSLDWRSSVQSPVGDKKKSSSV 122
++++++ Q + L+ D+ +Q+ S+ + +L+ SPV + S +
Sbjct: 194 WRRLKQENPQNNKKEELESLDNSCDQRQDLPSDQNTG--ALESSQCSPSPVSQEDLESEI 251
>UNIPROTKB|Q8AWG6 [details] [associations]
symbol:hhex "Hematopoietically-expressed homeobox protein
hhex" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0001570 "vasculogenesis" evidence=ISS]
[GO:0001889 "liver development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007507 "heart development" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0035162 "embryonic
hemopoiesis" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0016055 GO:GO:0009952 GO:GO:0043565 GO:GO:0001889
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001570
GO:GO:0030177 GO:GO:0035162 eggNOG:NOG252905 CTD:3087
HOGENOM:HOG000049110 HOVERGEN:HBG055460 KO:K08024 OrthoDB:EOG4XKV7W
HSSP:P22808 EMBL:AY160969 EMBL:CR761571 RefSeq:NP_989420.1
UniGene:Str.111 ProteinModelPortal:Q8AWG6 SMR:Q8AWG6 STRING:Q8AWG6
GeneID:395060 KEGG:xtr:395060 Xenbase:XB-GENE-487159
InParanoid:Q8AWG6 Uniprot:Q8AWG6
Length = 274
Score = 96 (38.9 bits), Expect = 0.00085, P = 0.00085
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 3 QYWFQNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREALAKDTGLSVRVVQVWFQNQRAK 62
Q F N QTI L + K +T + + R+ LAK LS R V+ WFQN+RAK
Sbjct: 143 QVRFSNDQTIEL---EKKFETQ------KYLSPPERKRLAKMLQLSERQVKTWFQNRRAK 193
Query: 63 MKKIQRKAKQQEGDKSLDKEDSEPHIKQEPH-----SEGESEWVSLDWRSSVQSPVGDKK 117
+++ K + +G+K D+ +S +I +E +E +S SLD +S SP +
Sbjct: 194 WRRL--KQENPQGNKK-DETESLENICEESQERCLSAEQKSRESSLDEPTS--SPTSQET 248
Query: 118 KSSSV 122
S V
Sbjct: 249 LDSEV 253
>UNIPROTKB|D4A3E6 [details] [associations]
symbol:Zfhx4 "Protein Zfhx4" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1563022 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 IPI:IPI00360964 Ensembl:ENSRNOT00000067194
ArrayExpress:D4A3E6 Uniprot:D4A3E6
Length = 3564
Score = 103 (41.3 bits), Expect = 0.00092, P = 0.00092
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2876 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2931
Query: 65 KIQ 67
K +
Sbjct: 2932 KFK 2934
>UNIPROTKB|F1RWK5 [details] [associations]
symbol:ZFHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:CU179688
EMBL:CU462958 Ensembl:ENSSSCT00000006763 Uniprot:F1RWK5
Length = 3566
Score = 103 (41.3 bits), Expect = 0.00092, P = 0.00092
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2879 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2934
Query: 65 KIQ 67
K +
Sbjct: 2935 KFK 2937
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + R ++K L+ R V++WFQN+R K+KK+ R+ + +E
Sbjct: 47 TRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRE 87
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 34 TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQQE 74
T + R ++K L+ R V++WFQN+R K+KK+ R+ + +E
Sbjct: 51 TRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRENRIRE 91
>UNIPROTKB|F1MPW8 [details] [associations]
symbol:F1MPW8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:DAAA02038914
EMBL:DAAA02038915 IPI:IPI00727901 UniGene:Bt.105445
Ensembl:ENSBTAT00000061595 NextBio:20878201 Uniprot:F1MPW8
Length = 3586
Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2897 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2952
Query: 65 KIQ 67
K +
Sbjct: 2953 KFK 2955
>RGD|1563022 [details] [associations]
symbol:Zfhx4 "zinc finger homeobox 4" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1563022 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717 KO:K09380
OrthoDB:EOG4Z0B4P CTD:79776 OMA:IMMQPVQ IPI:IPI00768052
RefSeq:NP_001178631.1 UniGene:Rn.133363 Ensembl:ENSRNOT00000011641
GeneID:310250 KEGG:rno:310250 UCSC:RGD:1563022 NextBio:661754
ArrayExpress:D4A3U5 Uniprot:D4A3U5
Length = 3593
Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 7 QNFQTIRLLNLKVKLKTSFNSCCPGHKTTQVREA--LAKDTGLSVRVVQVWFQNQRAKMK 64
+ F+T ++ NL++K+ +C ++T ++E L + GL RVVQVWFQN RAK K
Sbjct: 2905 KRFRT-QMSNLQLKV---LKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEK 2960
Query: 65 KIQ 67
K +
Sbjct: 2961 KFK 2963
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 93 (37.8 bits), Expect = 0.00096, P = 0.00096
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 12 IRLLNLKVK-LKTSFNSCCPGHK--TTQVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 68
IR N + L+ F+S HK + Q R+ LAK LS R V+ WFQN+RAK +++++
Sbjct: 81 IRFTNEQTDALEHKFDS----HKYLSPQERKKLAKSLSLSERQVKTWFQNRRAKWRRVRK 136
Query: 69 KAKQQE 74
+ ++
Sbjct: 137 DGEDED 142
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 135 0.00091 102 3 11 23 0.45 31
30 0.44 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 217
No. of states in DFA: 606 (64 KB)
Total size of DFA: 149 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.21u 0.07s 21.28t Elapsed: 00:00:06
Total cpu time: 21.24u 0.07s 21.31t Elapsed: 00:00:06
Start: Thu Aug 15 11:40:48 2013 End: Thu Aug 15 11:40:54 2013
WARNINGS ISSUED: 1