Query psy10852
Match_columns 563
No_of_seqs 414 out of 3593
Neff 9.0
Searched_HMMs 46136
Date Fri Aug 16 20:06:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10852.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10852hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4792|consensus 100.0 3.2E-45 6.9E-50 325.0 17.0 264 1-265 1-287 (293)
2 KOG4792|consensus 100.0 3.3E-43 7.1E-48 312.2 18.1 267 277-544 2-291 (293)
3 KOG1029|consensus 100.0 2E-42 4.4E-47 353.6 14.1 375 110-540 693-1112(1118)
4 KOG1264|consensus 100.0 1.6E-40 3.6E-45 341.4 18.1 260 7-444 530-833 (1267)
5 KOG4226|consensus 100.0 2.2E-37 4.8E-42 282.3 17.9 246 111-374 108-364 (379)
6 KOG4348|consensus 100.0 1.1E-32 2.4E-37 266.5 8.0 246 210-538 4-319 (627)
7 KOG4226|consensus 100.0 1.1E-31 2.4E-36 245.1 14.0 239 111-445 5-253 (379)
8 KOG4348|consensus 100.0 1.1E-31 2.5E-36 259.5 8.5 297 112-444 3-321 (627)
9 KOG4225|consensus 100.0 1.8E-30 4E-35 252.6 13.0 253 110-441 230-489 (489)
10 KOG1029|consensus 100.0 1.2E-29 2.6E-34 260.4 14.6 286 112-443 815-1110(1118)
11 KOG2996|consensus 100.0 2.1E-29 4.5E-34 251.8 12.4 206 223-442 626-863 (865)
12 KOG4225|consensus 100.0 4.8E-28 1E-32 235.9 15.8 221 208-536 233-488 (489)
13 KOG1264|consensus 99.9 5.8E-26 1.3E-30 234.6 11.3 159 5-169 642-833 (1267)
14 KOG0790|consensus 99.9 3.2E-25 6.9E-30 216.2 14.0 190 10-374 3-203 (600)
15 KOG2996|consensus 99.9 1.9E-25 4.1E-30 223.6 9.7 153 8-167 682-863 (865)
16 KOG3601|consensus 99.9 1.8E-25 3.9E-30 198.8 3.6 203 212-442 5-219 (222)
17 KOG4637|consensus 99.9 4E-25 8.7E-30 210.5 5.9 97 6-108 18-121 (464)
18 KOG3601|consensus 99.8 2.5E-21 5.5E-26 172.4 4.1 156 6-167 53-219 (222)
19 smart00252 SH2 Src homology 2 99.8 1E-19 2.2E-24 146.5 10.5 82 11-97 1-83 (84)
20 KOG4278|consensus 99.8 2E-19 4.4E-24 183.4 12.2 203 83-411 67-271 (1157)
21 PF00017 SH2: SH2 domain; Int 99.8 3.7E-19 8E-24 140.6 9.8 76 13-92 1-77 (77)
22 cd00173 SH2 Src homology 2 dom 99.8 5.3E-19 1.2E-23 145.7 10.8 81 12-97 1-82 (94)
23 KOG0197|consensus 99.7 2.8E-16 6E-21 160.1 9.5 161 110-382 11-184 (468)
24 KOG0790|consensus 99.6 1.1E-15 2.4E-20 150.0 7.4 93 10-107 109-216 (600)
25 KOG4278|consensus 99.6 2.9E-15 6.2E-20 153.4 9.0 125 5-136 146-271 (1157)
26 PF00017 SH2: SH2 domain; Int 99.5 1.1E-13 2.4E-18 109.2 9.7 76 288-367 1-77 (77)
27 PF14604 SH3_9: Variant SH3 do 99.5 3.5E-14 7.5E-19 100.6 5.1 49 390-439 1-49 (49)
28 smart00252 SH2 Src homology 2 99.5 2.1E-13 4.5E-18 109.6 10.3 81 287-372 2-83 (84)
29 PF14604 SH3_9: Variant SH3 do 99.5 6.1E-14 1.3E-18 99.3 5.8 49 485-535 1-49 (49)
30 cd00173 SH2 Src homology 2 dom 99.5 5.3E-13 1.1E-17 109.8 10.5 80 287-372 1-82 (94)
31 KOG0197|consensus 99.4 4.1E-13 8.9E-18 137.1 8.4 101 4-108 74-185 (468)
32 PF07653 SH3_2: Variant SH3 do 99.4 5E-13 1.1E-17 97.7 5.9 54 482-537 1-55 (55)
33 PF07653 SH3_2: Variant SH3 do 99.4 7.7E-13 1.7E-17 96.7 5.7 54 387-441 1-55 (55)
34 KOG3632|consensus 99.3 2.3E-12 4.9E-17 137.4 8.9 154 385-540 1138-1310(1335)
35 KOG4637|consensus 99.3 2.4E-12 5.2E-17 123.8 5.5 83 9-98 330-414 (464)
36 PF00018 SH3_1: SH3 domain; I 99.2 1.8E-11 3.9E-16 86.6 5.2 47 389-435 1-48 (48)
37 KOG0194|consensus 99.2 5.4E-11 1.2E-15 123.5 9.7 92 10-108 48-149 (474)
38 KOG2070|consensus 99.2 9.6E-12 2.1E-16 123.8 3.9 59 482-542 19-77 (661)
39 KOG1118|consensus 99.1 3E-11 6.6E-16 113.7 4.8 62 477-540 303-364 (366)
40 PF00018 SH3_1: SH3 domain; I 99.1 1.3E-10 2.7E-15 82.3 5.4 47 114-160 1-48 (48)
41 smart00326 SH3 Src homology 3 99.1 2.7E-10 5.8E-15 84.2 6.9 56 386-441 3-58 (58)
42 cd00174 SH3 Src homology 3 dom 99.1 3E-10 6.5E-15 82.6 6.7 52 388-439 2-53 (54)
43 KOG3632|consensus 99.1 2.7E-10 5.9E-15 121.9 7.5 150 109-263 1137-1308(1335)
44 KOG2199|consensus 99.0 6.1E-11 1.3E-15 115.6 1.4 58 109-167 214-271 (462)
45 KOG1930|consensus 99.0 2.6E-10 5.6E-15 111.9 5.5 92 9-106 210-321 (483)
46 KOG2070|consensus 99.0 9.8E-11 2.1E-15 116.8 2.5 57 386-443 18-74 (661)
47 smart00326 SH3 Src homology 3 99.0 8.4E-10 1.8E-14 81.4 6.3 54 482-537 4-58 (58)
48 KOG2199|consensus 99.0 8.7E-11 1.9E-15 114.5 1.0 57 385-442 215-271 (462)
49 KOG0162|consensus 99.0 6.6E-10 1.4E-14 115.6 6.7 60 476-537 1047-1106(1106)
50 cd00174 SH3 Src homology 3 dom 98.9 1.7E-09 3.7E-14 78.6 6.1 51 483-535 2-53 (54)
51 KOG1118|consensus 98.9 7.3E-10 1.6E-14 104.6 2.5 58 385-443 306-363 (366)
52 KOG0162|consensus 98.7 8.2E-09 1.8E-13 107.7 3.9 55 386-441 1052-1106(1106)
53 KOG2856|consensus 98.7 3.6E-09 7.8E-14 102.1 0.5 56 386-441 415-471 (472)
54 KOG2546|consensus 98.7 5E-09 1.1E-13 103.3 0.9 56 482-539 425-480 (483)
55 PF14633 SH2_2: SH2 domain; PD 98.5 3.5E-06 7.5E-11 79.0 15.9 81 12-95 39-124 (220)
56 KOG2546|consensus 98.5 6.1E-08 1.3E-12 95.7 2.3 57 385-442 423-479 (483)
57 KOG2856|consensus 98.5 3.5E-08 7.5E-13 95.4 0.1 55 481-537 415-471 (472)
58 KOG3751|consensus 98.4 2.5E-07 5.5E-12 93.8 3.5 91 5-96 513-606 (622)
59 KOG3655|consensus 98.3 2.1E-07 4.6E-12 93.7 1.3 57 385-441 427-483 (484)
60 KOG3875|consensus 98.3 1.8E-07 4E-12 88.8 0.8 59 110-168 268-332 (362)
61 KOG3655|consensus 98.2 8.1E-07 1.8E-11 89.6 3.2 58 479-538 426-484 (484)
62 KOG3875|consensus 98.2 2.5E-07 5.4E-12 87.9 -0.4 58 386-443 269-332 (362)
63 KOG0515|consensus 98.2 6.1E-07 1.3E-11 91.0 2.2 57 386-443 684-743 (752)
64 KOG0515|consensus 98.2 5.6E-07 1.2E-11 91.3 1.8 57 482-540 685-744 (752)
65 KOG1930|consensus 98.2 2.3E-06 5.1E-11 84.6 5.7 84 284-373 210-312 (483)
66 KOG1702|consensus 98.1 3.5E-06 7.7E-11 75.2 4.3 56 480-537 207-264 (264)
67 KOG1843|consensus 98.0 2E-06 4.3E-11 84.9 2.2 55 110-165 416-472 (473)
68 KOG2222|consensus 98.0 6.7E-07 1.4E-11 89.5 -1.4 60 480-541 548-607 (848)
69 KOG1702|consensus 98.0 3.3E-06 7.1E-11 75.4 3.0 57 385-441 207-264 (264)
70 KOG3697|consensus 98.0 6.3E-06 1.4E-10 77.6 4.7 91 10-108 200-343 (345)
71 KOG1843|consensus 98.0 3E-06 6.6E-11 83.6 2.7 56 384-440 415-472 (473)
72 KOG3523|consensus 97.9 2E-06 4.3E-11 89.0 -1.6 62 479-542 607-670 (695)
73 KOG0194|consensus 97.8 6.5E-05 1.4E-09 78.6 9.2 91 286-383 49-149 (474)
74 KOG4773|consensus 97.8 4E-06 8.6E-11 81.2 -0.6 151 387-551 91-244 (386)
75 KOG2528|consensus 97.7 1.9E-05 4.1E-10 79.1 3.1 58 387-444 4-62 (490)
76 KOG3725|consensus 97.7 9.2E-06 2E-10 75.2 -0.2 56 480-537 317-374 (375)
77 KOG3523|consensus 97.6 7.6E-06 1.7E-10 84.8 -2.1 58 387-444 610-668 (695)
78 KOG2222|consensus 97.4 1.9E-05 4E-10 79.4 -1.6 59 384-443 547-605 (848)
79 KOG1856|consensus 97.4 0.0011 2.5E-08 73.9 10.9 82 11-95 1108-1194(1299)
80 KOG4566|consensus 97.1 0.00073 1.6E-08 64.7 5.7 89 2-96 43-139 (258)
81 KOG4773|consensus 97.1 4.3E-05 9.3E-10 74.2 -2.7 56 387-443 177-232 (386)
82 KOG3557|consensus 96.8 0.00055 1.2E-08 71.9 2.1 59 385-444 500-558 (721)
83 KOG1451|consensus 96.8 0.001 2.2E-08 69.1 3.6 55 481-537 757-812 (812)
84 KOG3775|consensus 96.8 0.00058 1.3E-08 67.0 1.8 57 388-444 265-322 (482)
85 KOG0609|consensus 96.7 0.00054 1.2E-08 71.0 1.0 58 385-442 214-282 (542)
86 KOG2528|consensus 96.7 0.00067 1.5E-08 68.3 1.6 56 112-167 4-60 (490)
87 KOG3775|consensus 96.6 0.0011 2.4E-08 65.1 2.3 59 111-169 263-322 (482)
88 KOG4429|consensus 96.6 0.00066 1.4E-08 64.3 0.7 54 482-537 365-418 (421)
89 KOG3771|consensus 96.6 0.0017 3.7E-08 66.3 3.6 52 482-535 402-454 (460)
90 KOG3725|consensus 96.6 0.00054 1.2E-08 63.7 -0.2 56 385-441 317-374 (375)
91 KOG1451|consensus 96.5 0.0024 5.2E-08 66.3 4.3 59 382-441 753-812 (812)
92 KOG4575|consensus 96.5 0.0035 7.6E-08 65.6 5.5 61 478-540 6-68 (874)
93 KOG3751|consensus 96.5 0.0021 4.5E-08 66.1 3.6 89 282-371 515-606 (622)
94 KOG4575|consensus 96.5 0.0033 7.2E-08 65.8 4.8 58 385-442 8-66 (874)
95 KOG4429|consensus 96.3 0.0011 2.3E-08 62.9 0.3 55 386-441 364-418 (421)
96 KOG0609|consensus 96.3 0.0015 3.3E-08 67.7 1.2 57 110-166 214-281 (542)
97 KOG3557|consensus 96.1 0.0026 5.7E-08 66.9 1.6 60 482-544 502-562 (721)
98 PF14633 SH2_2: SH2 domain; PD 95.9 0.014 3.1E-07 54.9 5.6 73 18-95 141-219 (220)
99 KOG3771|consensus 95.8 0.005 1.1E-07 63.0 2.1 55 384-439 399-454 (460)
100 PF14603 hSH3: Helically-exten 95.3 0.024 5.3E-07 44.1 3.8 45 123-167 29-73 (89)
101 KOG0199|consensus 95.0 0.02 4.3E-07 61.6 3.4 52 388-439 377-430 (1039)
102 PF08239 SH3_3: Bacterial SH3 94.9 0.054 1.2E-06 39.0 4.8 37 499-535 17-55 (55)
103 PF08239 SH3_3: Bacterial SH3 94.9 0.041 8.8E-07 39.7 4.1 36 404-439 19-55 (55)
104 PF14603 hSH3: Helically-exten 94.6 0.043 9.4E-07 42.8 3.5 45 399-443 30-74 (89)
105 KOG3565|consensus 94.5 0.022 4.7E-07 62.3 2.3 56 482-539 580-638 (640)
106 KOG1856|consensus 94.4 0.027 5.9E-07 63.4 3.1 83 12-100 1206-1292(1299)
107 KOG0199|consensus 94.4 0.11 2.3E-06 56.3 7.2 56 479-538 375-433 (1039)
108 KOG3697|consensus 94.1 0.061 1.3E-06 51.4 4.2 91 284-382 199-342 (345)
109 KOG4384|consensus 94.0 0.063 1.4E-06 53.0 4.3 65 478-542 134-198 (361)
110 COG3103 SH3 domain protein [Si 93.5 0.13 2.8E-06 47.9 5.2 105 403-539 49-154 (205)
111 smart00287 SH3b Bacterial SH3 93.3 0.15 3.2E-06 37.8 4.3 36 403-438 26-61 (63)
112 smart00287 SH3b Bacterial SH3 93.3 0.21 4.5E-06 37.0 5.2 38 498-535 24-62 (63)
113 COG3103 SH3 domain protein [Si 93.0 0.19 4.1E-06 46.8 5.5 103 128-263 49-153 (205)
114 KOG3508|consensus 91.3 0.17 3.6E-06 56.7 3.5 120 11-149 81-202 (932)
115 PF06347 SH3_4: Bacterial SH3 91.2 0.59 1.3E-05 33.6 5.2 36 498-534 18-53 (55)
116 KOG3565|consensus 91.1 0.057 1.2E-06 59.1 -0.3 58 385-442 578-637 (640)
117 PRK10884 SH3 domain-containing 90.9 0.25 5.5E-06 46.3 3.7 41 403-443 49-90 (206)
118 PRK10884 SH3 domain-containing 89.9 0.33 7.2E-06 45.5 3.7 40 500-539 49-90 (206)
119 PF06347 SH3_4: Bacterial SH3 88.9 0.7 1.5E-05 33.2 4.0 35 402-438 19-53 (55)
120 KOG3812|consensus 87.0 0.25 5.5E-06 48.4 0.8 49 388-436 61-118 (475)
121 KOG3705|consensus 86.4 0.61 1.3E-05 46.9 3.1 56 386-441 510-566 (580)
122 KOG0040|consensus 84.1 0.033 7.1E-07 64.0 -7.5 58 481-540 969-1026(2399)
123 PF02762 Cbl_N3: CBL proto-onc 83.8 6.6 0.00014 29.9 6.8 43 12-54 3-46 (86)
124 KOG0040|consensus 83.7 0.039 8.5E-07 63.5 -7.2 58 386-444 969-1026(2399)
125 KOG3705|consensus 77.6 2.2 4.7E-05 43.1 3.2 52 483-536 512-565 (580)
126 KOG3812|consensus 76.9 1.7 3.6E-05 42.9 2.2 35 223-257 81-118 (475)
127 KOG4566|consensus 76.5 6.1 0.00013 38.3 5.9 81 283-369 49-137 (258)
128 PF11302 DUF3104: Protein of u 75.0 3.5 7.6E-05 31.5 3.0 25 498-522 3-33 (75)
129 PRK13914 invasion associated s 74.3 4.1 8.8E-05 43.1 4.4 37 500-536 104-141 (481)
130 PRK13914 invasion associated s 74.0 4.1 9E-05 43.0 4.4 39 403-441 104-142 (481)
131 smart00743 Agenet Tudor-like d 68.4 6.8 0.00015 28.6 3.4 26 500-525 2-27 (61)
132 PF11302 DUF3104: Protein of u 65.6 7.1 0.00015 29.8 2.9 25 401-425 3-33 (75)
133 smart00743 Agenet Tudor-like d 61.7 10 0.00022 27.7 3.2 22 403-424 2-23 (61)
134 KOG1314|consensus 60.6 9.4 0.0002 38.1 3.5 57 495-553 330-398 (414)
135 KOG4384|consensus 59.8 5.3 0.00012 39.9 1.7 60 207-266 138-197 (361)
136 PF12913 SH3_6: SH3 domain of 58.4 24 0.00051 25.3 4.3 34 498-531 20-54 (54)
137 KOG3667|consensus 49.0 21 0.00045 39.2 4.1 57 10-67 562-619 (682)
138 PF12913 SH3_6: SH3 domain of 47.9 38 0.00082 24.3 4.0 32 403-435 22-54 (54)
139 PF09465 LBR_tudor: Lamin-B re 34.0 1.7E+02 0.0036 21.1 5.4 23 402-424 4-26 (55)
140 smart00557 IG_FLMN Filamin-typ 31.9 67 0.0015 25.6 3.8 26 31-56 53-78 (93)
141 PF07935 SSV1_ORF_D-335: ORF D 30.8 1.8E+02 0.004 22.1 5.4 47 33-98 5-51 (72)
142 PF13983 YsaB: YsaB-like lipop 30.7 63 0.0014 24.1 2.9 31 33-63 46-76 (77)
143 KOG1785|consensus 26.2 95 0.0021 31.8 4.3 43 12-54 257-300 (563)
144 KOG3508|consensus 25.6 4 8.6E-05 46.2 -5.8 87 4-94 223-310 (932)
145 PF07828 PA-IL: PA-IL-like pro 25.1 63 0.0014 27.0 2.4 21 496-519 15-35 (121)
146 COG3807 Uncharacterized protei 25.1 1.6E+02 0.0034 26.0 4.9 35 129-164 61-95 (171)
147 PRK13545 tagH teichoic acids e 23.3 84 0.0018 34.2 3.7 38 407-444 375-417 (549)
148 PF12736 CABIT: Cell-cycle sus 23.2 2.8E+02 0.0061 26.8 7.2 61 58-138 50-122 (256)
149 PF00630 Filamin: Filamin/ABP2 22.3 96 0.0021 24.8 3.1 24 33-56 69-92 (101)
150 PF05641 Agenet: Agenet domain 22.1 91 0.002 23.3 2.7 22 501-522 1-25 (68)
151 KOG1769|consensus 21.2 4.6E+02 0.01 21.4 7.3 48 83-141 41-93 (99)
152 PF02762 Cbl_N3: CBL proto-onc 20.4 4.1E+02 0.009 20.5 6.9 43 289-331 5-48 (86)
No 1
>KOG4792|consensus
Probab=100.00 E-value=3.2e-45 Score=324.99 Aligned_cols=264 Identities=55% Similarity=0.945 Sum_probs=220.9
Q ss_pred CCCCCCCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCC-cc--eEEEe
Q psy10852 1 MTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTE-QQ--TCYKI 77 (563)
Q Consensus 1 ~~~~~~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~-~~--~~~~~ 77 (563)
|++++|..+...||+|.|||++|.++|...+ .|.||||+|++.+|+|+|||+.+.+|.||.|....... +. ..|.|
T Consensus 1 ~~~~FD~~er~swYfg~mSRqeA~~lL~~~r-~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rI 79 (293)
T KOG4792|consen 1 MAGNFDSSERSSWYFGPMSRQEAVALLQGQR-HGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRI 79 (293)
T ss_pred CCCccChhhccceecCcccHHHHHHHhcCcc-eeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeee
Confidence 7899999999999999999999999998877 49999999999999999999999999999999733221 11 15999
Q ss_pred CCceecChHhhHHhhhcccCCCccccccccccc------------eeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCe
Q psy10852 78 GDKTFSDLPSLLAFYKVHYLDTSPLIKPATKTI------------EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHW 145 (563)
Q Consensus 78 ~~~~F~sl~~Li~~y~~~~~~~~~L~~p~~~~~------------~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~w 145 (563)
++..|++|+.|++||+.|-|..+.|..|+.+.. +.++++|||.+...++|.|++|+++.|++|.++.|
T Consensus 80 gdQ~Fd~lPaLL~fykihyLdtttLi~p~~r~~~~~~~~~~~~~~~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqW 159 (293)
T KOG4792|consen 80 GDQEFDSLPALLEFYKIHYLDTTTLIEPAKRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQW 159 (293)
T ss_pred ccccccchHHHHhheeEeeeccccccccccccccccCcccchhhhhheeeeeccCCCccccCCcccCcEEEEecCcHHHh
Confidence 999999999999999999999999999988743 34677999999999999999999999999999999
Q ss_pred eEEeeCCCeeeEEecCceeeccccccccc-c------cccccC-CCCCCCCCCCCCccccccccccCccceeeeeccccC
Q psy10852 146 WTAQNISGEVGSIPVPYVQKYSEGMSILS-L------RNLHLD-SSSHHVPQQQTTPVRKTHLEVKLPAFARVKQVRVPN 217 (563)
Q Consensus 146 w~g~~~~g~~G~fP~~yv~~~~~~~~~~~-~------~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 217 (563)
|.++|..|++|++|.+||++..+...... + .+.... |.....+....+...+....+++|++++|+++..|+
T Consensus 160 W~Arns~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si~q~~~g~e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPn 239 (293)
T KOG4792|consen 160 WNARNSEGKRGMIPVPYVEKYRPASASVSALIGGASESSIPQSGGGAERFSSASTSSDTPLPLQQNLPAYARVIQKRVPN 239 (293)
T ss_pred hhhhccCCcccceechHHHhhhhhhcccccccCCcccccCCCCCCCCCCCCCCCcccCCcCccccCCChheeeehhcCCC
Confidence 99999999999999999998876542110 0 000000 111111222222333334567889999999999999
Q ss_pred CCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecCCC
Q psy10852 218 AYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTN 265 (563)
Q Consensus 218 a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~ 265 (563)
|++...|.+++||+|.|.++..+|-|+|+++|+.|.||.++|+..+.+
T Consensus 240 AYDkTaL~levGdiVkVTk~ninGqwegElnGk~G~fPfThvrf~d~~ 287 (293)
T KOG4792|consen 240 AYDKTALALEVGDIVKVTKKNINGQWEGELNGKIGHFPFTHVRFTDVQ 287 (293)
T ss_pred ccChhhhhhhcCcEEEEEeeccCceeeeeecCccccccceeEEeeccC
Confidence 999999999999999999999999999999999999999999998754
No 2
>KOG4792|consensus
Probab=100.00 E-value=3.3e-43 Score=312.19 Aligned_cols=267 Identities=54% Similarity=0.924 Sum_probs=221.3
Q ss_pred cCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeec-CCCcc--eeEEeC
Q psy10852 277 TGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKIT-NTEQQ--TCYKIG 353 (563)
Q Consensus 277 ~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~-~~~~~--~~~~i~ 353 (563)
++.+|+.+...||+|.|+|++|..+|..++ .|.||||+|.+.||+|+|+++.+.+|.||.|.... +..+. .+|.|+
T Consensus 2 ~~~FD~~er~swYfg~mSRqeA~~lL~~~r-~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIg 80 (293)
T KOG4792|consen 2 AGNFDSSERSSWYFGPMSRQEAVALLQGQR-HGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIG 80 (293)
T ss_pred CCccChhhccceecCcccHHHHHHHhcCcc-eeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeec
Confidence 356788889999999999999999999877 59999999999999999999999999999998832 21111 149999
Q ss_pred CcccCChhhHHhhhhcccCCCCccccccccc------------eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcE
Q psy10852 354 DKTFSDLPSLLAFYKVHYLDTSPLIKPATKT------------IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWW 421 (563)
Q Consensus 354 ~~~f~sl~~lv~~y~~~~~~~~~l~~P~~~~------------~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~ 421 (563)
++.|++|+.|++||+.+-|++++|..|+++. ..+++++|||.+...++|-|++|+++.++++.++.||
T Consensus 81 dQ~Fd~lPaLL~fykihyLdtttLi~p~~r~~~~~~~~~~~~~~~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW 160 (293)
T KOG4792|consen 81 DQEFDSLPALLEFYKIHYLDTTTLIEPAKRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWW 160 (293)
T ss_pred cccccchHHHHhheeEeeeccccccccccccccccCcccchhhhhheeeeeccCCCccccCCcccCcEEEEecCcHHHhh
Confidence 9999999999999999999999999998762 3467789999999999999999999999999999999
Q ss_pred EEEecCCcEEEEcCCCeEeccCCcccc-ccc----ccCC-CCCCCCC--CCCCCCcccccccccccccceEEeecCCCCC
Q psy10852 422 TAQNISGEVGSIPVPYVQKYSEGMSIL-SLR----NLHL-DSSSHHV--PQQQTTPVRKTHLEVKLPAFARVKQVRVPNA 493 (563)
Q Consensus 422 ~~~~~~g~~G~~P~~~v~~~~~~~~~~-~~~----~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 493 (563)
.+++..|+.|++|.+||+......+.. .+. .++. ++..+.. +....+...+..+.+..|.+|+|+++..|+|
T Consensus 161 ~Arns~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si~q~~~g~e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPnA 240 (293)
T KOG4792|consen 161 NARNSEGKRGMIPVPYVEKYRPASASVSALIGGASESSIPQSGGGAERFSSASTSSDTPLPLQQNLPAYARVIQKRVPNA 240 (293)
T ss_pred hhhccCCcccceechHHHhhhhhhcccccccCCcccccCCCCCCCCCCCCCCCcccCCcCccccCCChheeeehhcCCCc
Confidence 999999999999999999877653111 110 0111 1111111 1111222233445667899999999999999
Q ss_pred CCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCCCCCC
Q psy10852 494 YDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNETSV 544 (563)
Q Consensus 494 ~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~~~~~ 544 (563)
++...|.+++||+|.|.+++.+|-|+|+++|+.|.||..||+.++.+++.+
T Consensus 241 YDkTaL~levGdiVkVTk~ninGqwegElnGk~G~fPfThvrf~d~~~~de 291 (293)
T KOG4792|consen 241 YDKTALALEVGDIVKVTKKNINGQWEGELNGKIGHFPFTHVRFTDVQNPDE 291 (293)
T ss_pred cChhhhhhhcCcEEEEEeeccCceeeeeecCccccccceeEEeeccCCcCc
Confidence 999999999999999999999999999999999999999999999887764
No 3
>KOG1029|consensus
Probab=100.00 E-value=2e-42 Score=353.58 Aligned_cols=375 Identities=22% Similarity=0.327 Sum_probs=228.5
Q ss_pred ceeeeecccCCCCCCCCCcCCCCCEEEEEEec--CCCeeEEeeCCCeeeEEecCceeecccccccc---cccccccCCCC
Q psy10852 110 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKD--EEHWWTAQNISGEVGSIPVPYVQKYSEGMSIL---SLRNLHLDSSS 184 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~--~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~---~~~~~~~~g~~ 184 (563)
...|+|+|.|++++.+||+|..||||.|.+.. .++|..| .++|++||||.|||+++.....+. |+.++....+.
T Consensus 693 ~vkyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaG-el~gktGWFPenyvEki~~~e~p~~v~Pv~~l~~~~~p 771 (1118)
T KOG1029|consen 693 TVKYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAG-ELRGKTGWFPENYVEKIPAVETPGGVPPVQNLPPTMTP 771 (1118)
T ss_pred eEEEeeecccccCCcccccccCCCEEEEehhccCCcccccc-eeccccCcCcHHHHhhcccCCCCCCCCchhcCCCCCCc
Confidence 56699999999999999999999999998865 3566666 599999999999999876543221 11111111000
Q ss_pred CCCCCCCC----------------CccccccccccCc-----cceeeeeccccCCCCCCceeeccCCEEEEeeecCCCce
Q psy10852 185 HHVPQQQT----------------TPVRKTHLEVKLP-----AFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQW 243 (563)
Q Consensus 185 ~~~~~~~~----------------~~~~~~~~~~~~p-----~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~ 243 (563)
..++++.. .+..++ .-..| ...++++.|...+..+..|+|.+||+|+|+++.+ .||
T Consensus 772 sas~nq~a~~ad~~~~~~n~~~~t~~aA~p--~~tapg~~eve~lq~iA~y~wrakke~dLsFskgd~I~Vlekqe-mwW 848 (1118)
T KOG1029|consen 772 SASVNQIAVVADTKNESANAMGLTEGAAPP--ALTAPGQGEVEILQAIALYPWRAKKENDLSFSKGDTITVLEKQE-MWW 848 (1118)
T ss_pred ccccccceeecccccchhhccCCCCCCCCc--cccCCCchhhhhhhHHhhccccccccccccccCCCeeeeehhcc-cee
Confidence 00001100 000000 00111 1234556677789999999999999999999875 599
Q ss_pred eeeeCCceeeccccceeecCCCCC-----CCCCC-CCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEE--e
Q psy10852 244 EGELNGKTGHFPFTHVEFIPTNET-----MPFHS-SMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVR--D 315 (563)
Q Consensus 244 ~g~~~g~~G~~P~~~ve~~~~~~~-----~p~~~-~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR--~ 315 (563)
+|...|..||||.+||+.+..... .++.+ ....+.... ...+.. |... ..+...|.+- .
T Consensus 849 ~G~v~g~~GwFPksYVk~~~~~t~st~~~~s~es~sae~p~~~~---------~~a~~t-aa~v---~~qeq~ya~~~~~ 915 (1118)
T KOG1029|consen 849 FGEVAGEIGWFPKSYVKEVGAITGSTTKIESPESLSAEAPGAAA---------SDATPT-AAPV---APQEQLYAVYPYF 915 (1118)
T ss_pred cccccCccCcCcHHhhhhccccccccccccCcccccccCccccc---------cccCcc-cccc---cccceeEEEeccc
Confidence 999999999999999996553111 00000 000000000 000000 0000 0000111111 1
Q ss_pred cCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCC--cccCChhhHHhhhhccc----CCCCccccccccceeeEE
Q psy10852 316 SNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGD--KTFSDLPSLLAFYKVHY----LDTSPLIKPATKTIEKVI 389 (563)
Q Consensus 316 S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~--~~f~sl~~lv~~y~~~~----~~~~~l~~P~~~~~~~~~ 389 (563)
+....+++.+. .++. ..+... ++ .+|.-.+++ ..|++ +||...- ..+.+-.-|.++..+.+.
T Consensus 916 e~vEq~dlt~~--egd~---iLvtek-dg-eww~gt~~~r~gifPa-----n~y~r~~~q~gs~Tp~k~g~~~kkpeiAq 983 (1118)
T KOG1029|consen 916 EAVEQGDLTFH--EGDE---ILVTEK-DG-EWWTGTCGDREGIFPA-----NYYVRPKDQEGSGTPPKQGPTPKKPEIAQ 983 (1118)
T ss_pred ccccCCCcccc--ccce---EEEeec-cC-ceeccccCCccccccc-----cceeeehhccCCCCCCCCCCCCCCchhhh
Confidence 11112222111 1110 111111 11 122122222 56775 4443221 122223345556678899
Q ss_pred EeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-C---CcEEEEcCCCeEeccCCcccccccccCCCCCCCCCCCC
Q psy10852 390 AKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-S---GEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQ 465 (563)
Q Consensus 390 a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~---g~~G~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (563)
++-+|.+..++.|++..|++|.|..+.+.|||.|+.. + .+.||||++||+.+.+++...+ +..+
T Consensus 984 Via~yvAs~peQLsla~GqlIlIrkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~raT-----------Pa~~- 1051 (1118)
T KOG1029|consen 984 VIADYVASGPEQLSLAPGQLILIRKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGRAT-----------PATR- 1051 (1118)
T ss_pred hhhhhhccCchhccccCccEEEEEecCCCccchhhHhhcCCccccccccHHHhhhccCCCCcCC-----------CCCC-
Confidence 9999999999999999999999999999999999632 3 3679999999998887622111 0000
Q ss_pred CCCcccccccccccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceE-EcCCC
Q psy10852 466 QTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVE-FIPTN 540 (563)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~-~~~~~ 540 (563)
.-+.+.++|||. |+++|||+|++||+|.|+.+.+.+||.|+++|+.|+||+|||. ...+.
T Consensus 1052 -------------~v~qviamYdY~--AqndDELsF~kgdiI~VlnkdepeWW~Ge~ng~sGLFPSNYV~k~ttd~ 1112 (1118)
T KOG1029|consen 1052 -------------PVCQVIAMYDYE--AQNDDELSFKKGDIINVLNKDEPEWWSGERNGKSGLFPSNYVQKQTTDG 1112 (1118)
T ss_pred -------------ccceeEEeeccc--cCCcccccccCCCEEEecCCCChhhhcccccCccccCccccccccccCC
Confidence 012345566666 8889999999999999999999999999999999999999994 44443
No 4
>KOG1264|consensus
Probab=100.00 E-value=1.6e-40 Score=341.36 Aligned_cols=260 Identities=28% Similarity=0.545 Sum_probs=217.6
Q ss_pred CCCCCCccccCCC-HHHHHHHHcC-----CCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEe-CC
Q psy10852 7 PHDRNSWYFGMMT-RQEAQAILLS-----EKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKI-GD 79 (563)
Q Consensus 7 ~~~~~~w~~g~i~-r~~ae~~L~~-----~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~-~~ 79 (563)
-|..+.||||.+- |.+|+++|.. ++.||+||||+|++..|+|+||+.++|+|.|++|+....+ |..+|.+ ++
T Consensus 530 lH~~E~WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~-gt~Kyyl~dN 608 (1267)
T KOG1264|consen 530 LHFGEKWFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEG-GTLKYYLTDN 608 (1267)
T ss_pred hccchhhhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecC-CceeEEEecc
Confidence 4667899999999 9999999986 2557999999999999999999999999999999976554 3444555 67
Q ss_pred ceecChHhhHHhhhcccCCCc----cccccccccceeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCee
Q psy10852 80 KTFSDLPSLLAFYKVHYLDTS----PLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEV 155 (563)
Q Consensus 80 ~~F~sl~~Li~~y~~~~~~~~----~L~~p~~~~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~ 155 (563)
..|+||.+||.||+.+.|-+. .|..||++
T Consensus 609 ~vfdslY~LI~~Y~~~~Lr~aeF~m~LtePvPq----------------------------------------------- 641 (1267)
T KOG1264|consen 609 LVFDSLYALIQHYRETHLRCAEFEMRLTEPVPQ----------------------------------------------- 641 (1267)
T ss_pred hhHHHHHHHHHHHHhccccccceEEEecCCCCC-----------------------------------------------
Confidence 999999999999999866211 11122111
Q ss_pred eEEecCceeecccccccccccccccCCCCCCCCCCCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEe
Q psy10852 156 GSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVT 235 (563)
Q Consensus 156 G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~ 235 (563)
T Consensus 642 -------------------------------------------------------------------------------- 641 (1267)
T KOG1264|consen 642 -------------------------------------------------------------------------------- 641 (1267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCceeeeeCCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEe
Q psy10852 236 KTNINGQWEGELNGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRD 315 (563)
Q Consensus 236 ~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~ 315 (563)
..+|+..+|||..++|++||.+|..-+.+|+||||
T Consensus 642 --------------------------------------------p~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR- 676 (1267)
T KOG1264|consen 642 --------------------------------------------PNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIR- 676 (1267)
T ss_pred --------------------------------------------CCcccCCccccccccHHHHHHHHhhCccCcceEEE-
Confidence 13567779999999999999999998888999999
Q ss_pred cCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhhhcccCCC-Ccccccccc-----------
Q psy10852 316 SNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLDT-SPLIKPATK----------- 383 (563)
Q Consensus 316 S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~~-~~l~~P~~~----------- 383 (563)
+...+..|++|.+.+++++||+|.+ +|.. |.++...|.||.+||+||..+++.. ..|..|+..
T Consensus 677 ~~~~~nsy~iSfr~~gkikHcRi~r----dGr~-fvl~t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d 751 (1267)
T KOG1264|consen 677 KREGSNSYAISFRARGKIKHCRINR----DGRH-FVLGTSAFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERD 751 (1267)
T ss_pred eccCCceEEEEEEEcCcEeEEEEcc----CceE-EEeccHHHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcc
Confidence 5555889999999999999999988 4554 9999888999999999999988764 445555532
Q ss_pred ---------------------ceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEecc
Q psy10852 384 ---------------------TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYS 442 (563)
Q Consensus 384 ---------------------~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~ 442 (563)
....|+|||+|.|+.++||+|.+|.+|+++.+.+.|||.|...+...+|||++||+.+.
T Consensus 752 ~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~ 831 (1267)
T KOG1264|consen 752 INALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEIS 831 (1267)
T ss_pred cccccccccCCCCccccCccccchhhhhhhccccCCcccccccccceeEeeeccCCceeecccccceeeeccHHHhhhhc
Confidence 23568999999999999999999999999999999999998656789999999999887
Q ss_pred CC
Q psy10852 443 EG 444 (563)
Q Consensus 443 ~~ 444 (563)
..
T Consensus 832 ~~ 833 (1267)
T KOG1264|consen 832 TA 833 (1267)
T ss_pred cc
Confidence 64
No 5
>KOG4226|consensus
Probab=100.00 E-value=2.2e-37 Score=282.30 Aligned_cols=246 Identities=21% Similarity=0.391 Sum_probs=192.8
Q ss_pred eeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecccccccccccccccCCCCCCCCCC
Q psy10852 111 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQ 190 (563)
Q Consensus 111 ~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~~ 190 (563)
..++..|.|.++.++||++.+|+.|.|++|..++||+|. .+|+.||||+|||.+..+.........++.. +..
T Consensus 108 t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~-~ng~VGWFPSNYv~E~~ds~~gd~~s~~~~~------~~A 180 (379)
T KOG4226|consen 108 TPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGS-YNGQVGWFPSNYVTEEVDSAAGDSPSFLSLR------KAA 180 (379)
T ss_pred CceEEEEeeccccccccccccCcEEEEEEeccCcceecc-cCCeeccccccceehhccccccCCccceecc------hhh
Confidence 448899999999999999999999999999999999996 7999999999999987654221110000000 000
Q ss_pred CCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecC--CCceeeee-CCceeeccccceeecCCCCC
Q psy10852 191 QTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI--NGQWEGEL-NGKTGHFPFTHVEFIPTNET 267 (563)
Q Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~--~~W~~g~~-~g~~G~~P~~~ve~~~~~~~ 267 (563)
...+. ..-..+.-|.+.|.+.+..++||+|++||.+.|+++.. .+||+++. +|++|++|.||++.+.+...
T Consensus 181 ~a~n~------~~s~vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~ 254 (379)
T KOG4226|consen 181 SASNG------QGSRVLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDGPS 254 (379)
T ss_pred cccCC------CCceEEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccCcc
Confidence 00000 00124455667888889999999999999999999874 57999986 79999999999999886432
Q ss_pred CCCCCCCCc--------cCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEe
Q psy10852 268 MPFHSSMKM--------TGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIIN 339 (563)
Q Consensus 268 ~p~~~~~~~--------~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~ 339 (563)
......+.+ +.........+||+|.++|.+|+..|..+...|.||||+|++.||+|++|++..++.+||+++
T Consensus 255 ts~~~~~s~~pq~sgn~p~~sg~~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq 334 (379)
T KOG4226|consen 255 TSKALHPSHAPQISGNGPSSSGRFAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQ 334 (379)
T ss_pred ccccCCccccccccCCCCCccccccCCcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEE
Confidence 211111111 112233556799999999999999998887889999999999999999999999999999999
Q ss_pred eecCCCcceeEEeCCcccCChhhHHhhhhcccCCC
Q psy10852 340 KITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLDT 374 (563)
Q Consensus 340 ~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~~ 374 (563)
..++. |+|+.+.|.+|.+||+||++.++-+
T Consensus 335 ~~d~~-----ycIGqRkF~tmd~Lv~HY~kaPIft 364 (379)
T KOG4226|consen 335 LVDNV-----YCIGQRKFHTMDELVEHYKKAPIFT 364 (379)
T ss_pred Eecce-----EEeccceeccHHHHHHhhhcCCcee
Confidence 98776 9999999999999999999877654
No 6
>KOG4348|consensus
Probab=99.97 E-value=1.1e-32 Score=266.46 Aligned_cols=246 Identities=27% Similarity=0.427 Sum_probs=165.1
Q ss_pred eeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCcc
Q psy10852 210 VKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWY 289 (563)
Q Consensus 210 ~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~ 289 (563)
++..|.|.|.-++||.++.|++|.=+++.+.|||+|++||++|.||.|||..+...-..
T Consensus 4 ~ive~dy~a~hddelti~vgeii~nvkk~e~gw~egelngrrg~fpdnfV~eik~e~k~--------------------- 62 (627)
T KOG4348|consen 4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLEEGWLEGELNGRRGQFPDNFVVEIKVEFKD--------------------- 62 (627)
T ss_pred eeeecccccccCceeeEeHHHHHHhhhhhccceeeceeccccccCCchhhhhhhhhccc---------------------
Confidence 56677778999999999999999999999999999999999999999999888642000
Q ss_pred ccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhhhc
Q psy10852 290 FGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKV 369 (563)
Q Consensus 290 ~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~ 369 (563)
.....+.+.. -.++. .+. ..|.. |
T Consensus 63 -------------------d~l~nk~~r~-----------------~l~q~-~s~----------n~l~~------~--- 86 (627)
T KOG4348|consen 63 -------------------DDLVNKLSRD-----------------SLVQM-TSR----------NPLTV------H--- 86 (627)
T ss_pred -------------------cccccccccc-----------------chhhc-ccC----------CCccc------c---
Confidence 0000000000 00000 000 00000 0
Q ss_pred ccCCCC-ccccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccCCcccc
Q psy10852 370 HYLDTS-PLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSIL 448 (563)
Q Consensus 370 ~~~~~~-~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~~~~~~ 448 (563)
... ....|.......|+++|.|.+++++||+|+.||+|.|++..++|||.|+ ++|+.|+||+|||..........
T Consensus 87 ---q~v~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~-Lngk~GmFPsNFVkel~~~sde~ 162 (627)
T KOG4348|consen 87 ---QQVERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGK-LNGKVGMFPSNFVKELPTPSDES 162 (627)
T ss_pred ---CcccccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhce-ecCcccccchhhceecCCCCcch
Confidence 000 0011111236689999999999999999999999999999999999998 89999999999999877542210
Q ss_pred c------ccccCCC----------CCCCCCCCC--------------------C--------CC----------------
Q psy10852 449 S------LRNLHLD----------SSSHHVPQQ--------------------Q--------TT---------------- 468 (563)
Q Consensus 449 ~------~~~~~~~----------~~~~~~~~~--------------------~--------~~---------------- 468 (563)
. ..++.+. ..+....++ . +.
T Consensus 163 ~~aqd~~~S~stlagst~~~ps~s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~a 242 (627)
T KOG4348|consen 163 AAAQDPAASASTLAGSTARTPSKSIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSA 242 (627)
T ss_pred hhhcCcccchhhhcCcCCCCCcccccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccCc
Confidence 0 0000000 000000000 0 00
Q ss_pred -----ccccccc--ccccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeC--CCCEEEEEeCCeeeeecCCceEEcC
Q psy10852 469 -----PVRKTHL--EVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTN--INGQWEGELNGKTGHFPFTHVEFIP 538 (563)
Q Consensus 469 -----~~~~~~~--~~~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~~g~~~g~~G~~P~~~v~~~~ 538 (563)
...++.+ ..+..++||++|.|.+| +.+||+|++||+|.++.+. +.|||+|+++|++|.||.|||+.+.
T Consensus 243 sT~s~d~tktd~~~~tKtKeycrv~F~Ye~q--ndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~ 319 (627)
T KOG4348|consen 243 STQSVDITKTDTAETTKTKEYCRVKFVYEPQ--NDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ 319 (627)
T ss_pred cccCccccccccccchhhhhheeeeeeecCC--CccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence 0001111 11235689999999955 5889999999999999876 4899999999999999999999886
No 7
>KOG4226|consensus
Probab=99.97 E-value=1.1e-31 Score=245.14 Aligned_cols=239 Identities=25% Similarity=0.441 Sum_probs=167.0
Q ss_pred eeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeeccccccccccccccc-CCCCCCCCC
Q psy10852 111 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHL-DSSSHHVPQ 189 (563)
Q Consensus 111 ~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~-~g~~~~~~~ 189 (563)
..++|.+||.+|.++||-+++++.+.++.. ...||+++|...++|++|+|||+............++.- .|. +..+.
T Consensus 5 ~~vvak~dy~aq~~qeldikkner~~lldd-sk~wwrvrns~n~tgyvpsnyverkn~~~~~si~knlkd~~g~-kt~~k 82 (379)
T KOG4226|consen 5 VIVVAKWDYTAQQDQELDIKKNERLWLLDD-SKTWWRVRNSANRTGYVPSNYVERKNSLKKGSIVKNLKDTLGL-KTRRK 82 (379)
T ss_pred EEEEEEechhcccchhccccccceEEEEcC-CccceeeecccccCCcccchhhhcccchhhhHHHHhhhhcccc-ccccC
Confidence 457999999999999999999999999853 468999999999999999999998765433222111111 121 11111
Q ss_pred -CCCCccccccccccCc-----cc-eeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeec
Q psy10852 190 -QQTTPVRKTHLEVKLP-----AF-ARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFI 262 (563)
Q Consensus 190 -~~~~~~~~~~~~~~~p-----~~-~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~ 262 (563)
+.......+...+.+| .+ ..+..+|++.+..++||+|.+|+.|.|.++..+|||+|..+|++||||+|||...
T Consensus 83 ~s~~~~~~sp~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~ng~VGWFPSNYv~E~ 162 (379)
T KOG4226|consen 83 TSARDASPSPSTDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSYNGQVGWFPSNYVTEE 162 (379)
T ss_pred CCccccCCCCCccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEeccCcceecccCCeeccccccceehh
Confidence 1111111111111111 11 2245556668899999999999999999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeec
Q psy10852 263 PTNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKIT 342 (563)
Q Consensus 263 ~~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~ 342 (563)
.+...- ..+.|+-+.-.. ...
T Consensus 163 ~ds~~g--------------------------------------d~~s~~~~~~~A------~a~--------------- 183 (379)
T KOG4226|consen 163 VDSAAG--------------------------------------DSPSFLSLRKAA------SAS--------------- 183 (379)
T ss_pred cccccc--------------------------------------CCccceecchhh------ccc---------------
Confidence 642110 001121110000 000
Q ss_pred CCCcceeEEeCCcccCChhhHHhhhhcccCCCCccccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEec--CCCc
Q psy10852 343 NTEQQTCYKIGDKTFSDLPSLLAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKD--EEHW 420 (563)
Q Consensus 343 ~~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~~~~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~--~~~W 420 (563)
+ .+.+.....++|||.|.+..+.||+|++||.+.|+++. |++|
T Consensus 184 n-----------------------------------~~~s~vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdW 228 (379)
T KOG4226|consen 184 N-----------------------------------GQGSRVLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDW 228 (379)
T ss_pred C-----------------------------------CCCceEEEEEEEEecccCCChhhcccccCceeEeccCCCCCchH
Confidence 0 00011134689999999999999999999999999987 4689
Q ss_pred EEEEecCCcEEEEcCCCeEeccCCc
Q psy10852 421 WTAQNISGEVGSIPVPYVQKYSEGM 445 (563)
Q Consensus 421 ~~~~~~~g~~G~~P~~~v~~~~~~~ 445 (563)
|.+++.+|+.|+||.|||+.+....
T Consensus 229 wkarn~~G~vGLVPrNYv~vl~d~~ 253 (379)
T KOG4226|consen 229 WKARNARGQVGLVPRNYVVVLSDGP 253 (379)
T ss_pred HhhcccCCccceeecceEEEeccCc
Confidence 9999999999999999999998763
No 8
>KOG4348|consensus
Probab=99.97 E-value=1.1e-31 Score=259.46 Aligned_cols=297 Identities=26% Similarity=0.427 Sum_probs=177.2
Q ss_pred eeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecccccccccccc------cc--cCCC
Q psy10852 112 KVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRN------LH--LDSS 183 (563)
Q Consensus 112 ~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~------~~--~~g~ 183 (563)
.++..|||.+++++||.++.|+||..+.+.+.+||.|. ++|+.|+||.|||.++...+...++.+ +. .++.
T Consensus 3 d~ive~dy~a~hddelti~vgeii~nvkk~e~gw~ege-lngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s~n 81 (627)
T KOG4348|consen 3 DYIVEYDYDAVHDDELTIRVGEIIRNVKKLEEGWLEGE-LNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTSRN 81 (627)
T ss_pred ceeeecccccccCceeeEeHHHHHHhhhhhccceeece-eccccccCCchhhhhhhhhcccccccccccccchhhcccCC
Confidence 47788999999999999999999999999999999997 999999999999998876655443221 10 1111
Q ss_pred CCCCCCCCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecC
Q psy10852 184 SHHVPQQQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIP 263 (563)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~ 263 (563)
.-+..++...+..+. ..-..+|.|.|.|.+ +.++||.|+.||+|.|+..+++|||.|.++|+.|+||+|||..+.
T Consensus 82 ~l~~~q~v~rtn~~~---q~~~r~c~v~f~Y~p--qndDELelkVGDiIeli~eVEeGWw~G~Lngk~GmFPsNFVkel~ 156 (627)
T KOG4348|consen 82 PLTVHQQVERTNPPP---QPQARICVVTFAYSP--QNDDELELKVGDIIELISEVEEGWWKGKLNGKVGMFPSNFVKELP 156 (627)
T ss_pred CccccCcccccCCCC---CccceeEEEEEeecC--CCCceeeeeeccHHHhhhHhhhhhhhceecCcccccchhhceecC
Confidence 112222221111111 111245788888755 579999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecC
Q psy10852 264 TNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITN 343 (563)
Q Consensus 264 ~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~ 343 (563)
..+... .. ..++..++.-..|...+.-+... | |+...|+ +.... .|..+..
T Consensus 157 ~~sde~-~~------aqd~~~S~stlagst~~~ps~s~-------~------SE~a~gs----v~qPK-----kI~g~gf 207 (627)
T KOG4348|consen 157 TPSDES-AA------AQDPAASASTLAGSTARTPSKSI-------G------SEVAMGS----VTQPK-----KIDGTGF 207 (627)
T ss_pred CCCcch-hh------hcCcccchhhhcCcCCCCCcccc-------c------chhhccc----ccCcc-----cccCCCc
Confidence 644310 00 00111111111111111110000 0 0000000 00000 0000000
Q ss_pred CCcce--eEEeC-CcccCCh-----hhHHhhh---hcccCCC-CccccccccceeeEEEeecccCCCCCCCCCCCCCEEE
Q psy10852 344 TEQQT--CYKIG-DKTFSDL-----PSLLAFY---KVHYLDT-SPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILI 411 (563)
Q Consensus 344 ~~~~~--~~~i~-~~~f~sl-----~~lv~~y---~~~~~~~-~~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~ 411 (563)
++... -..+. ...|... ..+|..- .+.+.+. ..-..-.-+...+|+++|.|++++++||.|++||+|.
T Consensus 208 gdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~asT~s~d~tktd~~~~tKtKeycrv~F~Ye~qndDELt~KEgdil~ 287 (627)
T KOG4348|consen 208 GDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSASTQSVDITKTDTAETTKTKEYCRVKFVYEPQNDDELTLKEGDILI 287 (627)
T ss_pred ccccCCccceecccccccccccccccchhhhccCccccCccccccccccchhhhhheeeeeeecCCCccceeeccccEEE
Confidence 00000 00000 0011110 1111100 0000000 0001111235779999999999999999999999999
Q ss_pred EEEec--CCCcEEEEecCCcEEEEcCCCeEeccCC
Q psy10852 412 VVSKD--EEHWWTAQNISGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 412 v~~~~--~~~W~~~~~~~g~~G~~P~~~v~~~~~~ 444 (563)
++.+. +.|||.|+ ++|+.|+||.|||+.+...
T Consensus 288 lItK~cgdaGWweGE-LnGk~GvFPDNFv~lv~~~ 321 (627)
T KOG4348|consen 288 LITKNCGDAGWWEGE-LNGKKGVFPDNFVELVQVP 321 (627)
T ss_pred Eecccccccceeeee-ecCccccCCchhhhhcCCc
Confidence 99976 56999998 8999999999999988743
No 9
>KOG4225|consensus
Probab=99.97 E-value=1.8e-30 Score=252.64 Aligned_cols=253 Identities=21% Similarity=0.377 Sum_probs=168.2
Q ss_pred ceeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecccccccccccccccCCCCCCCCC
Q psy10852 110 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQ 189 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~ 189 (563)
...++|+|+|.+++..||+|.+||||.|+.+.|++|+.|. .+|+.|+||++||+.+.......+.+
T Consensus 230 ~~~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGE-hhGr~GifP~sYvE~~~~~e~~qP~~------------- 295 (489)
T KOG4225|consen 230 KRAARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGE-HHGRVGIFPASYVEILTPREKAQPAR------------- 295 (489)
T ss_pred cchhhheeccccCCccccccCCCCEEEEEeeccCceeeee-ecceecceechheeecCcccccCcCC-------------
Confidence 3448999999999999999999999999999999999997 99999999999999987532211100
Q ss_pred CCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeC--CceeeccccceeecCCCCC
Q psy10852 190 QQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELN--GKTGHFPFTHVEFIPTNET 267 (563)
Q Consensus 190 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~--g~~G~~P~~~ve~~~~~~~ 267 (563)
....+......+++.|.+++..+.||+|++|+.|.++.+.+.+|++|.+. ++.|+||.+||+.+.....
T Consensus 296 ---------~~P~q~~~~g~a~A~y~F~~~s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~ 366 (489)
T KOG4225|consen 296 ---------PPPQQVLEQGEAIAKYNFNADSPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSPKL 366 (489)
T ss_pred ---------CCcccccccccccccCCCCCCCchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhcccc
Confidence 01123445567788888899999999999999999999999999999986 8999999999999986421
Q ss_pred -CCCC-CCCCc-cCCCCCCCCCCccccccCHHHHHHHHhc-CCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecC
Q psy10852 268 -MPFH-SSMKM-TGTFDPHDRNSWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITN 343 (563)
Q Consensus 268 -~p~~-~~~~~-~~~~~~~~~~~w~~g~~sr~~A~~~l~~-~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~ 343 (563)
.+.. +..+. +...+.. +...+..... ..+ ...+.......+
T Consensus 367 ~~~~~~~~~p~~p~~s~~~-----------~~~~~~s~~~~~~~------------~~t~~~~q~~~n------------ 411 (489)
T KOG4225|consen 367 ELPLDYPDLPIPPRSSNEL-----------RPLSEDSMKNAWPQ------------THTQSSTQPPEN------------ 411 (489)
T ss_pred ccccccCCCCCCcccchhh-----------cccccchhhhcccc------------cccccccCCCCC------------
Confidence 1111 00000 0000000 0000000000 000 000000000000
Q ss_pred CCcceeEEeCCcccCChhhHHhhhhcccCCCCccccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEE
Q psy10852 344 TEQQTCYKIGDKTFSDLPSLLAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTA 423 (563)
Q Consensus 344 ~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~~~~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~ 423 (563)
|...+...+ ..+.. ...+. ....++|||.|.+++++||.|.+||+|.|++++|+||+.|
T Consensus 412 -------------~~qepr~~~----~~~~~--~qt~~--~~l~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvG 470 (489)
T KOG4225|consen 412 -------------FPQEPRVTE----KNDAH--SQTSS--EPLKYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVG 470 (489)
T ss_pred -------------ccccccccc----ccCcc--cCCCC--CcccceeccccCCCCchhheeccCCEEeeeecccCcceec
Confidence 000000000 00000 00000 1124899999999999999999999999999999999999
Q ss_pred Ee-cCCcEEEEcCCCeEec
Q psy10852 424 QN-ISGEVGSIPVPYVQKY 441 (563)
Q Consensus 424 ~~-~~g~~G~~P~~~v~~~ 441 (563)
+. +.|+.|.||.|||+.+
T Consensus 471 ts~rtg~fGtFPgnyV~~~ 489 (489)
T KOG4225|consen 471 TSRRTGKFGTFPGNYVKRL 489 (489)
T ss_pred cceecccccccCccccccC
Confidence 42 5899999999999863
No 10
>KOG1029|consensus
Probab=99.96 E-value=1.2e-29 Score=260.38 Aligned_cols=286 Identities=25% Similarity=0.414 Sum_probs=166.1
Q ss_pred eeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecccccccccccccccCCCCCCCCCCC
Q psy10852 112 KVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQQ 191 (563)
Q Consensus 112 ~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 191 (563)
.|+|+|.|.+..+++|+|.+||+|+||++. +.||+| +..|++||||.+||+++.-.....- ...+........+.
T Consensus 815 q~iA~y~wrakke~dLsFskgd~I~Vlekq-emwW~G-~v~g~~GwFPksYVk~~~~~t~st~-~~~s~es~sae~p~-- 889 (1118)
T KOG1029|consen 815 QAIALYPWRAKKENDLSFSKGDTITVLEKQ-EMWWFG-EVAGEIGWFPKSYVKEVGAITGSTT-KIESPESLSAEAPG-- 889 (1118)
T ss_pred hHHhhccccccccccccccCCCeeeeehhc-cceecc-cccCccCcCcHHhhhhccccccccc-cccCcccccccCcc--
Confidence 689999999999999999999999999886 689999 5999999999999997653211110 00000000000000
Q ss_pred CCccccccc-cccCccceeeeecccc-CCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeecccc-ceeecCCCCCC
Q psy10852 192 TTPVRKTHL-EVKLPAFARVKQVRVP-NAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFT-HVEFIPTNETM 268 (563)
Q Consensus 192 ~~~~~~~~~-~~~~p~~~~~~~~~~~-~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~-~ve~~~~~~~~ 268 (563)
..++.... ........++.+.|.+ .+.....|.|..||.|.|++++ +.||.|.++++.|+||+| |+...+.+..+
T Consensus 890 -~~~~~a~~taa~v~~qeq~ya~~~~~e~vEq~dlt~~egd~iLvtekd-geww~gt~~~r~gifPan~y~r~~~q~gs~ 967 (1118)
T KOG1029|consen 890 -AAASDATPTAAPVAPQEQLYAVYPYFEAVEQGDLTFHEGDEILVTEKD-GEWWTGTCGDREGIFPANYYVRPKDQEGSG 967 (1118)
T ss_pred -ccccccCcccccccccceeEEEecccccccCCCccccccceEEEeecc-CceeccccCCccccccccceeeehhccCCC
Confidence 00000000 0000111223333333 4467789999999999999876 569999999999999999 56555544433
Q ss_pred CCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcce
Q psy10852 269 PFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQT 348 (563)
Q Consensus 269 p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~ 348 (563)
.+...-..+. .+ ..| +++. .|.. .|.-.|++..+. -+.|... +..|+|
T Consensus 968 Tp~k~g~~~k-------kp--------eiA-qVia------~yvA------s~peQLsla~Gq---lIlIrkK-n~sGWW 1015 (1118)
T KOG1029|consen 968 TPPKQGPTPK-------KP--------EIA-QVIA------DYVA------SGPEQLSLAPGQ---LILIRKK-NASGWW 1015 (1118)
T ss_pred CCCCCCCCCC-------Cc--------hhh-hhhh------hhhc------cCchhccccCcc---EEEEEec-CCCccc
Confidence 2211111110 00 001 1110 0100 000011111111 0111111 112333
Q ss_pred -e-EEeCC-----cccCChhhHHhhhhcccCCCCccccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcE
Q psy10852 349 -C-YKIGD-----KTFSDLPSLLAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWW 421 (563)
Q Consensus 349 -~-~~i~~-----~~f~sl~~lv~~y~~~~~~~~~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~ 421 (563)
| +...+ ..|+.. .|.... ..+.-..|.....+.++|+|||.+++++||+|.+||+|.|+.+++.+||
T Consensus 1016 eGELqarGkkrq~GWFPa~--yVKvL~----~~s~raTPa~~~v~qviamYdY~AqndDELsF~kgdiI~VlnkdepeWW 1089 (1118)
T KOG1029|consen 1016 EGELQARGKKRQIGWFPAE--YVKVLE----PGSGRATPATRPVCQVIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWW 1089 (1118)
T ss_pred hhhHhhcCCccccccccHH--Hhhhcc----CCCCcCCCCCCccceeEEeeccccCCcccccccCCCEEEecCCCChhhh
Confidence 0 11111 234421 111000 1112233444446889999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEcCCCeEeccC
Q psy10852 422 TAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 422 ~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
.|. .+|+.|+||+|||+....
T Consensus 1090 ~Ge-~ng~sGLFPSNYV~k~tt 1110 (1118)
T KOG1029|consen 1090 SGE-RNGKSGLFPSNYVQKQTT 1110 (1118)
T ss_pred ccc-ccCccccCcccccccccc
Confidence 997 899999999999976544
No 11
>KOG2996|consensus
Probab=99.96 E-value=2.1e-29 Score=251.82 Aligned_cols=206 Identities=29% Similarity=0.538 Sum_probs=169.3
Q ss_pred ceeeccCCEEEEeeecC-CCceeeee--CCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHH
Q psy10852 223 ALKLEIGDIIKVTKTNI-NGQWEGEL--NGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQ 299 (563)
Q Consensus 223 eLsf~~Gd~v~V~~~~~-~~W~~g~~--~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~ 299 (563)
.|.+..||++.++...+ ..||+|+. .+..|+||++-|++...-..-+... .-.++...||.|+|.|.+|+
T Consensus 626 ~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~-------~~d~s~~~WyaG~MERaqae 698 (865)
T KOG2996|consen 626 RLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYV-------PTDYSEFPWYAGEMERAQAE 698 (865)
T ss_pred ceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCC-------ccchhhhhhhcchHhhhhhh
Confidence 57888999999888765 67999997 4689999999998765421110000 12244569999999999999
Q ss_pred HHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeC-CcccCChhhHHhhhhcccCCC----
Q psy10852 300 AILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSDLPSLLAFYKVHYLDT---- 374 (563)
Q Consensus 300 ~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~-~~~f~sl~~lv~~y~~~~~~~---- 374 (563)
..|.+.. +|+||||.+....+.|++|+++++.|+|+.|...+.- ++|. +..|.|+.+||+||+.+++..
T Consensus 699 s~Lk~~~-ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~-----~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~ 772 (865)
T KOG2996|consen 699 STLKNRP-NGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGK-----VHITEDKKFNSLVELVEYYQSHSLKEIFKA 772 (865)
T ss_pred hHhhcCC-CceEEEEecccchhheeEEEEeccccceEEEEecCCe-----EEechhhhhhhHHHHHHHHHhccHHHHHHH
Confidence 9998854 5999999999989999999999999999999987433 7886 599999999999999998753
Q ss_pred --Cccccccc--------------------cceeeEEEeecccCCCCCCCCCCCCCEEEEEEecC--CCcEEEEecCCcE
Q psy10852 375 --SPLIKPAT--------------------KTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE--EHWWTAQNISGEV 430 (563)
Q Consensus 375 --~~l~~P~~--------------------~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~--~~W~~~~~~~g~~ 430 (563)
++|..|+. +....++|-|||-+.+..||||++||+|.++.+.. .|||.|+ .+|+.
T Consensus 773 LDTtLk~Pyke~e~sa~~~~~~~~~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGe-vngrv 851 (865)
T KOG2996|consen 773 LDTTLKFPYKEPEHSAGQRGNRAGNSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGE-VNGRV 851 (865)
T ss_pred hhhhhcCCCcChhhhhhhccccccccccCcceeeeeeeccccCCCchhhcccccCCEEEEehhccccCceecce-ecCcc
Confidence 56777764 13456788899999999999999999999999874 5999998 89999
Q ss_pred EEEcCCCeEecc
Q psy10852 431 GSIPVPYVQKYS 442 (563)
Q Consensus 431 G~~P~~~v~~~~ 442 (563)
||||++||++..
T Consensus 852 GwFPstYVee~~ 863 (865)
T KOG2996|consen 852 GWFPSTYVEEDD 863 (865)
T ss_pred cccccccccccC
Confidence 999999998754
No 12
>KOG4225|consensus
Probab=99.95 E-value=4.8e-28 Score=235.87 Aligned_cols=221 Identities=27% Similarity=0.404 Sum_probs=158.1
Q ss_pred eeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCC
Q psy10852 208 ARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNS 287 (563)
Q Consensus 208 ~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~ 287 (563)
++|+|+| .+....||.|.+||+|.|+++.|++|++|+++|+.|+||.+|||.+....-. .+
T Consensus 233 aralf~F--~~qt~kEL~~~kGDIVyI~rkvD~nWyeGEhhGr~GifP~sYvE~~~~~e~~------------qP----- 293 (489)
T KOG4225|consen 233 ARALFDF--EAQTPKELPFNKGDIVYILRKVDQNWYEGEHHGRVGIFPASYVEILTPREKA------------QP----- 293 (489)
T ss_pred hhheecc--ccCCccccccCCCCEEEEEeeccCceeeeeecceecceechheeecCccccc------------Cc-----
Confidence 5556555 7788999999999999999999999999999999999999999999741100 00
Q ss_pred ccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhh
Q psy10852 288 WYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFY 367 (563)
Q Consensus 288 w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y 367 (563)
+ + +. |..
T Consensus 294 ---------------------~----~-~~--P~q--------------------------------------------- 300 (489)
T KOG4225|consen 294 ---------------------A----R-PP--PQQ--------------------------------------------- 300 (489)
T ss_pred ---------------------C----C-CC--ccc---------------------------------------------
Confidence 0 0 00 000
Q ss_pred hcccCCCCccccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-CCcEEEEcCCCeEeccCCcc
Q psy10852 368 KVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKYSEGMS 446 (563)
Q Consensus 368 ~~~~~~~~~l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~g~~G~~P~~~v~~~~~~~~ 446 (563)
.+ ....++|+|+|.+..+.||++++|+.|.++.+.+..|++|.+. .++.|+||++||+.+.....
T Consensus 301 --------~~------~~g~a~A~y~F~~~s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~ 366 (489)
T KOG4225|consen 301 --------VL------EQGEAIAKYNFNADSPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSPKL 366 (489)
T ss_pred --------cc------ccccccccCCCCCCCchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhcccc
Confidence 00 0125899999999999999999999999999999999999865 68999999999998875411
Q ss_pred cc------------ccccc-------CCC------CCCCCCCCC------CCCccccccc-ccccccceEEeecCCCCCC
Q psy10852 447 IL------------SLRNL-------HLD------SSSHHVPQQ------QTTPVRKTHL-EVKLPAFARVKQVRVPNAY 494 (563)
Q Consensus 447 ~~------------~~~~~-------~~~------~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~y~~~~~ 494 (563)
.. .+.+. +.. ..+.+.+.. .......+.. ....+-.++|+|.|.|+.
T Consensus 367 ~~~~~~~~~p~~p~~s~~~~~~~~~s~~~~~~~~~t~~~~q~~~n~~qepr~~~~~~~~~qt~~~~l~yrAly~Y~pqn- 445 (489)
T KOG4225|consen 367 ELPLDYPDLPIPPRSSNELRPLSEDSMKNAWPQTHTQSSTQPPENFPQEPRVTEKNDAHSQTSSEPLKYRALYSYRPQN- 445 (489)
T ss_pred ccccccCCCCCCcccchhhcccccchhhhcccccccccccCCCCCcccccccccccCcccCCCCCcccceeccccCCCC-
Confidence 00 00000 000 000011100 0000010000 111223489999999665
Q ss_pred CCCCeeccCCCEEEEEEeCCCCEEEE--EeCCeeeeecCCceEE
Q psy10852 495 DKTALKLEIGDIIKVTKTNINGQWEG--ELNGKTGHFPFTHVEF 536 (563)
Q Consensus 495 ~~~eL~~~~gd~i~v~~~~~~~w~~g--~~~g~~G~~P~~~v~~ 536 (563)
++||-|..||||.|++++|+||+.| ++.|+-|+||.|||+.
T Consensus 446 -edeLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~ 488 (489)
T KOG4225|consen 446 -EDELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR 488 (489)
T ss_pred -chhheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence 8899999999999999999999999 8889999999999975
No 13
>KOG1264|consensus
Probab=99.93 E-value=5.8e-26 Score=234.63 Aligned_cols=159 Identities=29% Similarity=0.561 Sum_probs=139.3
Q ss_pred CCCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecC
Q psy10852 5 FDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSD 84 (563)
Q Consensus 5 ~~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~s 84 (563)
..+|++++|||..++|++||++|..-+.||+||||.++. ...|+||++.+|+|+|++|.+. |.. |.++...|.|
T Consensus 642 p~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~-~nsy~iSfr~~gkikHcRi~rd----Gr~-fvl~t~~Fes 715 (1267)
T KOG1264|consen 642 PNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREG-SNSYAISFRARGKIKHCRINRD----GRH-FVLGTSAFES 715 (1267)
T ss_pred CCcccCCccccccccHHHHHHHHhhCccCcceEEEeccC-CceEEEEEEEcCcEeEEEEccC----ceE-EEeccHHHHH
Confidence 568999999999999999999999977889999995544 7789999999999999999984 443 9999989999
Q ss_pred hHhhHHhhhcccCC-Cccccccccc--------------------------------cceeeeecccCCCCCCCCCcCCC
Q psy10852 85 LPSLLAFYKVHYLD-TSPLIKPATK--------------------------------TIEKVIAKYDFDGNDPDDLPFKK 131 (563)
Q Consensus 85 l~~Li~~y~~~~~~-~~~L~~p~~~--------------------------------~~~~~~a~~d~~~~~~~eLs~~~ 131 (563)
|.+||+||.++++- ...|.+|+.. +...++|+|+|.++.++||+|.+
T Consensus 716 Lv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSFpk 795 (1267)
T KOG1264|consen 716 LVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSFPK 795 (1267)
T ss_pred HHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccccc
Confidence 99999999999885 5667777643 12458999999999999999999
Q ss_pred CCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecccc
Q psy10852 132 NDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEG 169 (563)
Q Consensus 132 Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~~ 169 (563)
|-+|.+++|...+||.|.-.+..++|||+|||+++..+
T Consensus 796 ~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~ 833 (1267)
T KOG1264|consen 796 GAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTA 833 (1267)
T ss_pred cceeEeeeccCCceeecccccceeeeccHHHhhhhccc
Confidence 99999999999999999844456899999999988764
No 14
>KOG0790|consensus
Probab=99.93 E-value=3.2e-25 Score=216.22 Aligned_cols=190 Identities=28% Similarity=0.584 Sum_probs=155.3
Q ss_pred CCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEe-CCceecChHhh
Q psy10852 10 RNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKI-GDKTFSDLPSL 88 (563)
Q Consensus 10 ~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~-~~~~F~sl~~L 88 (563)
+..|||.+|+-.+||.||+....+|+||.|.|++++|+|+|+++.+++|.|++|...++. |.+ ++..|.++.||
T Consensus 3 s~~wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~-----~~l~~gekfat~~EL 77 (600)
T KOG0790|consen 3 SRRWFHPDLSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDF-----YDLYGGEKFATLAEL 77 (600)
T ss_pred chhhcCCCccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCcc-----ccccCCccccchHHH
Confidence 467999999999999999998888999999999999999999999999999999987643 766 67999999999
Q ss_pred HHhhhcccCCCccccccccccceeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeeccc
Q psy10852 89 LAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 168 (563)
Q Consensus 89 i~~y~~~~~~~~~L~~p~~~~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~~ 168 (563)
|+||+.+.- .|.=+.|++|.+-.
T Consensus 78 vqyyme~~~----------------------------~lkekng~~ielK~----------------------------- 100 (600)
T KOG0790|consen 78 VQYYMEHHG----------------------------QLKEKNGDVIELKY----------------------------- 100 (600)
T ss_pred HHHHHhhhH----------------------------HHHhcCCCEEEecC-----------------------------
Confidence 999998731 12123333333210
Q ss_pred ccccccccccccCCCCCCCCCCCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeC
Q psy10852 169 GMSILSLRNLHLDSSSHHVPQQQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELN 248 (563)
Q Consensus 169 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~ 248 (563)
T Consensus 101 -------------------------------------------------------------------------------- 100 (600)
T KOG0790|consen 101 -------------------------------------------------------------------------------- 100 (600)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEE
Q psy10852 249 GKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVK 328 (563)
Q Consensus 249 g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~ 328 (563)
|.++.+ + .++.||||+++..+|+.+|......|+||||+|.++||+|+||++
T Consensus 101 ------pl~cAd---------------------p-tserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvr 152 (600)
T KOG0790|consen 101 ------PLNCAD---------------------P-TSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVR 152 (600)
T ss_pred ------CCccCC---------------------c-hhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEE
Confidence 000100 0 123799999999999999988777799999999999999999999
Q ss_pred eCC---------eeEEEEEeeecCCCcceeEEeCC-cccCChhhHHhhhhcccCCC
Q psy10852 329 ENN---------KVSHYIINKITNTEQQTCYKIGD-KTFSDLPSLLAFYKVHYLDT 374 (563)
Q Consensus 329 ~~~---------~v~h~~I~~~~~~~~~~~~~i~~-~~f~sl~~lv~~y~~~~~~~ 374 (563)
.++ +|.|..|...+.. |.+++ ..|+|+.+||+||+.++.-.
T Consensus 153 Tdd~~~~~~~~~kVtHvmI~~q~~k-----ydVGgge~F~sltdLidhykknpmvE 203 (600)
T KOG0790|consen 153 TDDKKESNDSKLKVTHVMIRCQEGK-----YDVGGGERFDSLTDLVEHYKKNPMVE 203 (600)
T ss_pred cCCcccCCCCccceEEEEEEecccc-----cccCCccccchHHHHHHHhccCchhh
Confidence 976 8999999987643 88875 89999999999999988654
No 15
>KOG2996|consensus
Probab=99.92 E-value=1.9e-25 Score=223.58 Aligned_cols=153 Identities=30% Similarity=0.583 Sum_probs=133.5
Q ss_pred CCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC-CceecChH
Q psy10852 8 HDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSDLP 86 (563)
Q Consensus 8 ~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~-~~~F~sl~ 86 (563)
+..++||.|.|-|.+||..|++.. +|+||||.+....+.|+||+.++..|+|++|...++ .|.|. ...|.|+.
T Consensus 682 ~s~~~WyaG~MERaqaes~Lk~~~-ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg-----~~~i~E~k~F~sl~ 755 (865)
T KOG2996|consen 682 YSEFPWYAGEMERAQAESTLKNRP-NGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDG-----KVHITEDKKFNSLV 755 (865)
T ss_pred hhhhhhhcchHhhhhhhhHhhcCC-CceEEEEecccchhheeEEEEeccccceEEEEecCC-----eEEechhhhhhhHH
Confidence 344689999999999999998855 599999999887889999999999999999998743 26664 59999999
Q ss_pred hhHHhhhcccCC------Cccccccccc--------------------cceeeeecccCCCCCCCCCcCCCCCEEEEEEe
Q psy10852 87 SLLAFYKVHYLD------TSPLIKPATK--------------------TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSK 140 (563)
Q Consensus 87 ~Li~~y~~~~~~------~~~L~~p~~~--------------------~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~ 140 (563)
|||+||+.|+|. .+.|+.|+.. .+-.++|.|||.+++-.+|||+.||+|.++.+
T Consensus 756 ELVeyYq~~sLke~Fk~LDTtLk~Pyke~e~sa~~~~~~~~~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k 835 (865)
T KOG2996|consen 756 ELVEYYQSHSLKEIFKALDTTLKFPYKEPEHSAGQRGNRAGNSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDK 835 (865)
T ss_pred HHHHHHHhccHHHHHHHhhhhhcCCCcChhhhhhhccccccccccCcceeeeeeeccccCCCchhhcccccCCEEEEehh
Confidence 999999999874 5678888762 24558999999999999999999999999998
Q ss_pred c--CCCeeEEeeCCCeeeEEecCceeecc
Q psy10852 141 D--EEHWWTAQNISGEVGSIPVPYVQKYS 167 (563)
Q Consensus 141 ~--~~~ww~g~~~~g~~G~fP~~yv~~~~ 167 (563)
. |.+||.|. .+|+.||||++||++..
T Consensus 836 ~g~d~GWWkGe-vngrvGwFPstYVee~~ 863 (865)
T KOG2996|consen 836 VGEDQGWWKGE-VNGRVGWFPSTYVEEDD 863 (865)
T ss_pred ccccCceecce-ecCcccccccccccccC
Confidence 6 46999997 99999999999999875
No 16
>KOG3601|consensus
Probab=99.91 E-value=1.8e-25 Score=198.78 Aligned_cols=203 Identities=24% Similarity=0.411 Sum_probs=173.6
Q ss_pred eccccCCCCCCceeeccCCEEEEeeecCC-CceeeeeCCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCccc
Q psy10852 212 QVRVPNAYDKTALKLEIGDIIKVTKTNIN-GQWEGELNGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWYF 290 (563)
Q Consensus 212 ~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~-~W~~g~~~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~~ 290 (563)
+.+...+...+||+|.+|+.|.++...|+ +|...+++|..|++|.||.+... ..|++
T Consensus 5 a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~~g~~P~Nai~~~~----------------------~~wve 62 (222)
T KOG3601|consen 5 AKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAELDGPEGFIPKNAIRMKP----------------------HEWVE 62 (222)
T ss_pred hhhhhhhcCcccceeecCCceEecchHHhhhhhhHhhcCccccCccccccccc----------------------cccee
Confidence 34445677889999999999999988764 68899999999999999997643 28999
Q ss_pred cccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhhhcc
Q psy10852 291 GMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVH 370 (563)
Q Consensus 291 g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~~ 370 (563)
+.++|..|+.++.. ...|.|++|.++++||.|++++++.+.|.|+.+.+...+ +|......|.++.+|++||+++
T Consensus 63 ~~i~r~~ae~~l~~-~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~----k~~lw~skfnslnplv~Y~rt~ 137 (222)
T KOG3601|consen 63 GLIPRPLAEDLLSK-KRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFG----KYFLWSSKFNSLNPLVSYHRTA 137 (222)
T ss_pred cccccchhhhhhhc-cCcchhhhhhhhcCcccccccccCCCCceeccccccCcc----ccccchhhccCCCCCcccCccc
Confidence 99999999999998 777999999999999999999999999999999876555 3677778999999999999987
Q ss_pred cCCCC---------c--cccccccceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeE
Q psy10852 371 YLDTS---------P--LIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQ 439 (563)
Q Consensus 371 ~~~~~---------~--l~~P~~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~ 439 (563)
+.... + +..|.+....+..++|+|.++.+.+|.|++||++.|+++.+.-||.|+ ..|+.|+||++||.
T Consensus 138 s~~r~~qi~l~d~~~~~~~~~~~~~~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs-~lg~agiFpagyv~ 216 (222)
T KOG3601|consen 138 SQSRNQQIFLRDMEPPPAPLPPAPTNYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGS-KLGRAGIFPAGYVA 216 (222)
T ss_pred ccccceeeeecccccccccCCCCccchhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhcc-ccCceeeecCcccc
Confidence 66431 1 112222346688999999999999999999999999999999999997 78999999999986
Q ss_pred ecc
Q psy10852 440 KYS 442 (563)
Q Consensus 440 ~~~ 442 (563)
+..
T Consensus 217 p~d 219 (222)
T KOG3601|consen 217 PSD 219 (222)
T ss_pred ccc
Confidence 543
No 17
>KOG4637|consensus
Probab=99.91 E-value=4e-25 Score=210.46 Aligned_cols=97 Identities=28% Similarity=0.545 Sum_probs=84.2
Q ss_pred CCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC-CceecC
Q psy10852 6 DPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSD 84 (563)
Q Consensus 6 ~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~-~~~F~s 84 (563)
|.+..++||||+|+|+++...|.+.++ |+||||+-++-+|.|+|+++.++.++-++|...+.. |.+. .-.|.|
T Consensus 18 ~~L~~a~WYWgdisReev~~~L~d~PD-GsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgK-----yGF~d~ltf~S 91 (464)
T KOG4637|consen 18 DELQDAEWYWGDISREEVNKKLRDQPD-GSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGK-----YGFSDPLTFNS 91 (464)
T ss_pred hhhhhccccccccCHHHHHHHhcCCCC-CcEEeeccccCCCceEEEEecCCccceeeeEEecCc-----cCCCCchhhHH
Confidence 457788999999999999999988664 999999987789999999999999999999987654 5554 479999
Q ss_pred hHhhHHhhhcccCC------Cccccccccc
Q psy10852 85 LPSLLAFYKVHYLD------TSPLIKPATK 108 (563)
Q Consensus 85 l~~Li~~y~~~~~~------~~~L~~p~~~ 108 (563)
+.+||+||+..+|. .+.|++|+.+
T Consensus 92 VVelIn~yr~~SL~~yN~~LDvrLlyPVs~ 121 (464)
T KOG4637|consen 92 VVELINHYRNESLAQYNPKLDVRLLYPVSR 121 (464)
T ss_pred HHHHHHHHhhhHHHhhCcccceeeechHHH
Confidence 99999999998775 4678888866
No 18
>KOG3601|consensus
Probab=99.83 E-value=2.5e-21 Score=172.42 Aligned_cols=156 Identities=24% Similarity=0.425 Sum_probs=134.1
Q ss_pred CCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecCh
Q psy10852 6 DPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDL 85 (563)
Q Consensus 6 ~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~sl 85 (563)
......+||+|.|+|..||.+|+. ..+|+||+|.++..+|.|.+|+++...|.||++.+...+ +|++-...|.++
T Consensus 53 i~~~~~~wve~~i~r~~ae~~l~~-~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~----k~~lw~skfnsl 127 (222)
T KOG3601|consen 53 IRMKPHEWVEGLIPRPLAEDLLSK-KRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFG----KYFLWSSKFNSL 127 (222)
T ss_pred cccccccceecccccchhhhhhhc-cCcchhhhhhhhcCcccccccccCCCCceeccccccCcc----ccccchhhccCC
Confidence 333456899999999999999998 556999999999999999999999999999999987665 599988899999
Q ss_pred HhhHHhhhcccCCC---------c--cccccccccceeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCe
Q psy10852 86 PSLLAFYKVHYLDT---------S--PLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGE 154 (563)
Q Consensus 86 ~~Li~~y~~~~~~~---------~--~L~~p~~~~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~ 154 (563)
.+|++||+++.... . .+..|.........++|||.++.+.+|.|++|+.+.|+...+..||.|. +.|+
T Consensus 128 nplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~~~~~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs-~lg~ 206 (222)
T KOG3601|consen 128 NPLVSYHRTASQSRNQQIFLRDMEPPPAPLPPAPTNYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGS-KLGR 206 (222)
T ss_pred CCCcccCcccccccceeeeecccccccccCCCCccchhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhcc-ccCc
Confidence 99999999876531 1 1222222446678999999999999999999999999999999999997 8999
Q ss_pred eeEEecCceeecc
Q psy10852 155 VGSIPVPYVQKYS 167 (563)
Q Consensus 155 ~G~fP~~yv~~~~ 167 (563)
.|+||++||...+
T Consensus 207 agiFpagyv~p~d 219 (222)
T KOG3601|consen 207 AGIFPAGYVAPSD 219 (222)
T ss_pred eeeecCccccccc
Confidence 9999999998664
No 19
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.81 E-value=1e-19 Score=146.47 Aligned_cols=82 Identities=37% Similarity=0.710 Sum_probs=74.0
Q ss_pred CCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCC-ceecChHhhH
Q psy10852 11 NSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGD-KTFSDLPSLL 89 (563)
Q Consensus 11 ~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~-~~F~sl~~Li 89 (563)
++||||.|+|++||++|.+.+ +|+||||.|++.++.|+||++.++.++||+|....++ .|.+.+ ..|.||.+||
T Consensus 1 ~~w~~g~i~r~~Ae~lL~~~~-~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~----~~~l~~~~~F~sl~eLI 75 (84)
T smart00252 1 QPWYHGFISREEAEKLLKNEG-DGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDG----KFYLDGGRKFPSLVELV 75 (84)
T ss_pred CCeecccCCHHHHHHHHhcCC-CcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCC----cEEECCCCccCCHHHHH
Confidence 489999999999999998855 6999999999878999999999999999999987643 388876 9999999999
Q ss_pred HhhhcccC
Q psy10852 90 AFYKVHYL 97 (563)
Q Consensus 90 ~~y~~~~~ 97 (563)
+||+.+++
T Consensus 76 ~~y~~~~~ 83 (84)
T smart00252 76 EHYQKNSL 83 (84)
T ss_pred HHHhhCCC
Confidence 99998865
No 20
>KOG4278|consensus
Probab=99.80 E-value=2e-19 Score=183.42 Aligned_cols=203 Identities=27% Similarity=0.453 Sum_probs=154.8
Q ss_pred cChHhhHHhhhcccCCCccccccccccceeeeecccCCCCCCCCCcCCCCCEEEEEEec-CCCeeEEeeCCCeeeEEecC
Q psy10852 83 SDLPSLLAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKD-EEHWWTAQNISGEVGSIPVP 161 (563)
Q Consensus 83 ~sl~~Li~~y~~~~~~~~~L~~p~~~~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~-~~~ww~g~~~~g~~G~fP~~ 161 (563)
.++.+-|.+-++..| |.++-.+....++|+|||.+..++.|++.+|+.+.|+.-. +.+|..++..+|+ ||+|+|
T Consensus 67 q~lsea~RwsSkEnL----la~~sendpNLFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSN 141 (1157)
T KOG4278|consen 67 QSLSEAIRWSSKENL----LACSSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSN 141 (1157)
T ss_pred chhHHHHhccchhhh----hcccccCCCceeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCC-cccccc
Confidence 345555555433322 2223333445799999999999999999999999999875 4678888877776 999999
Q ss_pred ceeecccccccccccccccCCCCCCCCCCCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecCCC
Q psy10852 162 YVQKYSEGMSILSLRNLHLDSSSHHVPQQQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNING 241 (563)
Q Consensus 162 yv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~ 241 (563)
|+.++..
T Consensus 142 yItPvNS------------------------------------------------------------------------- 148 (1157)
T KOG4278|consen 142 YITPVNS------------------------------------------------------------------------- 148 (1157)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 9877642
Q ss_pred ceeeeeCCceeeccccceeecCCCCCCCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCc
Q psy10852 242 QWEGELNGKTGHFPFTHVEFIPTNETMPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILG 321 (563)
Q Consensus 242 W~~g~~~g~~G~~P~~~ve~~~~~~~~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g 321 (563)
.+...||||.++|..|+.+|.+. ..|+||||+|++++|
T Consensus 149 -----------------------------------------LeKhsWYHGpvSRsaaEy~LsSg-InGSFLVRESEsSpg 186 (1157)
T KOG4278|consen 149 -----------------------------------------LEKHSWYHGPVSRSAAEYILSSG-INGSFLVRESESSPG 186 (1157)
T ss_pred -----------------------------------------hhhcccccCccccchhhhhhhcC-cccceEEeeccCCCc
Confidence 12338999999999999999876 449999999999999
Q ss_pred ceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhhhcccCCC-CccccccccceeeEEEeecccCCCCC
Q psy10852 322 NYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLDT-SPLIKPATKTIEKVIAKYDFDGNDPD 400 (563)
Q Consensus 322 ~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~~-~~l~~P~~~~~~~~~a~~~y~~~~~~ 400 (563)
.|+++++++++|.||+|.....+ .. |......|.+|.+||.|+....+.. +.|-+|.++. .... +|.-.+.. +
T Consensus 187 Q~sISlRyeGRVyHYRINt~~dg--K~-yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~-nKpt-vygvSPn~-D 260 (1157)
T KOG4278|consen 187 QYSISLRYEGRVYHYRINTDNDG--KM-YVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKK-NKPT-VYGVSPNA-D 260 (1157)
T ss_pred ceeEEEEecceEEEEEeeccCCc--cE-EEeehhhhhHHHHHHhhccccccceeEeeeccCccC-CCCc-eeeecCCc-c
Confidence 99999999999999999886654 22 4445689999999999999988776 5577888762 2222 56555554 7
Q ss_pred CCCCCCCCEEE
Q psy10852 401 DLPFKKNDILI 411 (563)
Q Consensus 401 el~~~~g~~v~ 411 (563)
+..+.+-|+++
T Consensus 261 kWEmeRtdItM 271 (1157)
T KOG4278|consen 261 KWEMERTDITM 271 (1157)
T ss_pred hhhccchheee
Confidence 77777777764
No 21
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.79 E-value=3.7e-19 Score=140.65 Aligned_cols=76 Identities=41% Similarity=0.773 Sum_probs=69.1
Q ss_pred ccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC-CceecChHhhHHh
Q psy10852 13 WYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSDLPSLLAF 91 (563)
Q Consensus 13 w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~-~~~F~sl~~Li~~ 91 (563)
||||.|+|++||++|++...+|+||||.|.+.+|.|+|||+.+++|+||+|.+..++ .|.+. +..|+||.+||+|
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~----~~~~~~~~~F~sl~~LV~~ 76 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENG----GYFLSDGKKFPSLSDLVEH 76 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTS----EEESSTSSEBSSHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCc----eEEccCCCcCCCHHHHHHh
Confidence 999999999999999985566999999999888999999999999999999998765 36664 5889999999999
Q ss_pred h
Q psy10852 92 Y 92 (563)
Q Consensus 92 y 92 (563)
|
T Consensus 77 y 77 (77)
T PF00017_consen 77 Y 77 (77)
T ss_dssp H
T ss_pred C
Confidence 8
No 22
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.79 E-value=5.3e-19 Score=145.71 Aligned_cols=81 Identities=41% Similarity=0.808 Sum_probs=71.5
Q ss_pred CccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC-CceecChHhhHH
Q psy10852 12 SWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSDLPSLLA 90 (563)
Q Consensus 12 ~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~-~~~F~sl~~Li~ 90 (563)
+||||.|+|++||++|++ ..+|+||||.|.+.++.|+||++.+++++||+|.+..++ .+... +..|+||.+||+
T Consensus 1 ~w~~g~i~r~~Ae~~L~~-~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~----~~~~~~~~~f~sl~eLv~ 75 (94)
T cd00173 1 PWYHGPISREEAEELLKK-KPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDG----YYLLGEGRSFPSLPELIE 75 (94)
T ss_pred CccccCCCHHHHHHHHhc-CCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCC----eEEecCCCccCCHHHHHH
Confidence 699999999999999987 456999999999778999999999999999999997765 13333 789999999999
Q ss_pred hhhcccC
Q psy10852 91 FYKVHYL 97 (563)
Q Consensus 91 ~y~~~~~ 97 (563)
||+.+++
T Consensus 76 ~y~~~~~ 82 (94)
T cd00173 76 HYQKNPL 82 (94)
T ss_pred HHhhCcc
Confidence 9999875
No 23
>KOG0197|consensus
Probab=99.65 E-value=2.8e-16 Score=160.07 Aligned_cols=161 Identities=35% Similarity=0.679 Sum_probs=130.7
Q ss_pred ceeeeecccCCCCCCCCCcCCCCCE-EEEEEecCCCeeEEeeC-CCeeeEEecCceeecccccccccccccccCCCCCCC
Q psy10852 110 IEKVIAKYDFDGNDPDDLPFKKNDI-LIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHV 187 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~eLs~~~Gd~-i~vl~~~~~~ww~g~~~-~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~ 187 (563)
...++|+|||.+....+|+|.+||. ..+++..+..||.+++. .+..|++|.|||.+.... +
T Consensus 11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~~~----~------------- 73 (468)
T KOG0197|consen 11 ETIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNRGS----P------------- 73 (468)
T ss_pred cceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccccC----C-------------
Confidence 4578999999999999999999999 88888888999999876 788889999888765310 0
Q ss_pred CCCCCCccccccccccCccceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecCCCCC
Q psy10852 188 PQQQTTPVRKTHLEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNET 267 (563)
Q Consensus 188 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~~~ 267 (563)
T Consensus 74 -------------------------------------------------------------------------------- 73 (468)
T KOG0197|consen 74 -------------------------------------------------------------------------------- 73 (468)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccCCCCCCCCCCccccccCHHHHHHHHhc-CCCCCcEEEEecCCCCcceEEEEEeCC------eeEEEEEee
Q psy10852 268 MPFHSSMKMTGTFDPHDRNSWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKENN------KVSHYIINK 340 (563)
Q Consensus 268 ~p~~~~~~~~~~~~~~~~~~w~~g~~sr~~A~~~l~~-~~~~G~FlvR~S~~~~g~~~ls~~~~~------~v~h~~I~~ 340 (563)
.....+..+||++.++|.+|++.|.. +...|+||||+|++.+|+|+++++... .|+|++|..
T Consensus 74 -----------~~~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~ 142 (468)
T KOG0197|consen 74 -----------AFIKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQ 142 (468)
T ss_pred -----------CccccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeE
Confidence 00112345999999999999965554 567799999999999999999999866 899999999
Q ss_pred ecCCCcceeEE--eC-CcccCChhhHHhhhhcccCCC-Cccccccc
Q psy10852 341 ITNTEQQTCYK--IG-DKTFSDLPSLLAFYKVHYLDT-SPLIKPAT 382 (563)
Q Consensus 341 ~~~~~~~~~~~--i~-~~~f~sl~~lv~~y~~~~~~~-~~l~~P~~ 382 (563)
.+.+ ++. ++ ...|+++.+||+||+.+.... +.+..|+.
T Consensus 143 ~~~~----~~~~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~ 184 (468)
T KOG0197|consen 143 LDGG----GLYPYIDERELFSSLQQLVNYYSKNADGLCTRLRDPCS 184 (468)
T ss_pred cCCC----CeecCCCHHHhhhhHHHHHhhhhccCcchhhcccCchh
Confidence 8765 355 65 489999999999999988776 34556654
No 24
>KOG0790|consensus
Probab=99.60 E-value=1.1e-15 Score=150.01 Aligned_cols=93 Identities=30% Similarity=0.605 Sum_probs=79.6
Q ss_pred CCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECC---------eEEEEEEEEecCCCcceEEEeCC-
Q psy10852 10 RNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENN---------KVSHYIINKITNTEQQTCYKIGD- 79 (563)
Q Consensus 10 ~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~---------~v~h~~I~~~~~~~~~~~~~~~~- 79 (563)
++.||||.|+-.+||.||.....+|+||||+|.+.||+|+|||+.+. +|.|..|+..+. +|-+++
T Consensus 109 serWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~-----kydVGgg 183 (600)
T KOG0790|consen 109 SERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEG-----KYDVGGG 183 (600)
T ss_pred hhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEeccc-----ccccCCc
Confidence 46799999999999999977667799999999999999999999866 899999998653 399965
Q ss_pred ceecChHhhHHhhhcccCCC-----cccccccc
Q psy10852 80 KTFSDLPSLLAFYKVHYLDT-----SPLIKPAT 107 (563)
Q Consensus 80 ~~F~sl~~Li~~y~~~~~~~-----~~L~~p~~ 107 (563)
..|.||.+||+||+++++-. ..|..|+.
T Consensus 184 e~F~sltdLidhykknpmvEt~gtvv~LrqP~n 216 (600)
T KOG0790|consen 184 ERFDSLTDLVEHYKKNPMVETLGTVVYLRQPLN 216 (600)
T ss_pred cccchHHHHHHHhccCchhhhcceeEEeecccc
Confidence 89999999999999998741 23555654
No 25
>KOG4278|consensus
Probab=99.59 E-value=2.9e-15 Score=153.43 Aligned_cols=125 Identities=28% Similarity=0.475 Sum_probs=97.3
Q ss_pred CCCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecC
Q psy10852 5 FDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSD 84 (563)
Q Consensus 5 ~~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~s 84 (563)
.+.++...||||.++|..||.+|.. ..+|+||||+|++.+|.|+||+|+.++|.||+|....+ |.. |...+..|.+
T Consensus 146 vNSLeKhsWYHGpvSRsaaEy~LsS-gInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~d--gK~-yvt~EsrF~T 221 (1157)
T KOG4278|consen 146 VNSLEKHSWYHGPVSRSAAEYILSS-GINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDND--GKM-YVTQESRFRT 221 (1157)
T ss_pred ccchhhcccccCccccchhhhhhhc-CcccceEEeeccCCCcceeEEEEecceEEEEEeeccCC--ccE-EEeehhhhhH
Confidence 4567778999999999999999977 45699999999999999999999999999999997654 343 7777899999
Q ss_pred hHhhHHhhhcccCC-CccccccccccceeeeecccCCCCCCCCCcCCCCCEEE
Q psy10852 85 LPSLLAFYKVHYLD-TSPLIKPATKTIEKVIAKYDFDGNDPDDLPFKKNDILI 136 (563)
Q Consensus 85 l~~Li~~y~~~~~~-~~~L~~p~~~~~~~~~a~~d~~~~~~~eLs~~~Gd~i~ 136 (563)
|.|||.||+.+..+ -|.|.+|.++....- +|...+ +.+..-+.+-||++
T Consensus 222 LaELVHHHStvADGLittLhYPApK~nKpt--vygvSP-n~DkWEmeRtdItM 271 (1157)
T KOG4278|consen 222 LAELVHHHSTVADGLITTLHYPAPKKNKPT--VYGVSP-NADKWEMERTDITM 271 (1157)
T ss_pred HHHHHhhccccccceeEeeeccCccCCCCc--eeeecC-Ccchhhccchheee
Confidence 99999999999887 456778887733221 232222 22555555656544
No 26
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.50 E-value=1.1e-13 Score=109.18 Aligned_cols=76 Identities=41% Similarity=0.773 Sum_probs=69.8
Q ss_pred ccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeC-CcccCChhhHHhh
Q psy10852 288 WYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG-DKTFSDLPSLLAF 366 (563)
Q Consensus 288 w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~-~~~f~sl~~lv~~ 366 (563)
||+|.|+|++|+++|.....+|+||||.|.+.++.|+|+++..++++|++|.....+ +|.+. ...|+|+.+||+|
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~----~~~~~~~~~F~sl~~LV~~ 76 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENG----GYFLSDGKKFPSLSDLVEH 76 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTS----EEESSTSSEBSSHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCc----eEEccCCCcCCCHHHHHHh
Confidence 999999999999999996777999999999989999999999999999999998776 36675 4889999999999
Q ss_pred h
Q psy10852 367 Y 367 (563)
Q Consensus 367 y 367 (563)
|
T Consensus 77 y 77 (77)
T PF00017_consen 77 Y 77 (77)
T ss_dssp H
T ss_pred C
Confidence 8
No 27
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.49 E-value=3.5e-14 Score=100.58 Aligned_cols=49 Identities=43% Similarity=1.011 Sum_probs=44.9
Q ss_pred EeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeE
Q psy10852 390 AKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQ 439 (563)
Q Consensus 390 a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~ 439 (563)
|+|+|.++.++||+|++||+|.|+.+.+++||+|++ +|+.|+||++||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRN-TGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEE-TTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEE-CCEEEEECHHhCC
Confidence 789999999999999999999999999999999985 9999999999996
No 28
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.49 E-value=2.1e-13 Score=109.60 Aligned_cols=81 Identities=37% Similarity=0.716 Sum_probs=72.9
Q ss_pred CccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCC-cccCChhhHHh
Q psy10852 287 SWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGD-KTFSDLPSLLA 365 (563)
Q Consensus 287 ~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~-~~f~sl~~lv~ 365 (563)
+||+|.++|++|+.+|.+.. +|+||||.|++.++.|+|+++..+.++|+.|.....+ +|.+.+ ..|+++.+||+
T Consensus 2 ~w~~g~i~r~~Ae~lL~~~~-~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~----~~~l~~~~~F~sl~eLI~ 76 (84)
T smart00252 2 PWYHGFISREEAEKLLKNEG-DGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDG----KFYLDGGRKFPSLVELVE 76 (84)
T ss_pred CeecccCCHHHHHHHHhcCC-CcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCC----cEEECCCCccCCHHHHHH
Confidence 79999999999999998855 7999999999989999999999999999999987642 288876 99999999999
Q ss_pred hhhcccC
Q psy10852 366 FYKVHYL 372 (563)
Q Consensus 366 ~y~~~~~ 372 (563)
||+.+++
T Consensus 77 ~y~~~~~ 83 (84)
T smart00252 77 HYQKNSL 83 (84)
T ss_pred HHhhCCC
Confidence 9987654
No 29
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.48 E-value=6.1e-14 Score=99.32 Aligned_cols=49 Identities=35% Similarity=0.510 Sum_probs=43.0
Q ss_pred EeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceE
Q psy10852 485 VKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVE 535 (563)
Q Consensus 485 ~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~ 535 (563)
|+++|. +.+++||+|++||+|.|+++.++|||+|+.+|++|+||++||+
T Consensus 1 Al~~y~--~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYE--AQDPDELSFKKGDVITVLEKSDDGWWYGRNTGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBC--SSSTTB-EB-TTEEEEEEEESSTSEEEEEETTEEEEEEGGGEE
T ss_pred CCccCC--CCCcCEeeEcCCCEEEEEEeCCCCEEEEEECCEEEEECHHhCC
Confidence 578888 4458899999999999999989999999999999999999996
No 30
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.45 E-value=5.3e-13 Score=109.81 Aligned_cols=80 Identities=40% Similarity=0.774 Sum_probs=72.0
Q ss_pred CccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeC--CcccCChhhHH
Q psy10852 287 SWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG--DKTFSDLPSLL 364 (563)
Q Consensus 287 ~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~--~~~f~sl~~lv 364 (563)
+||||.|+|++|+.+|.+ ..+|+||||.|.+.++.|+||++..+.++|+.|...+.+ +.+. ...|+|+.+||
T Consensus 1 ~w~~g~i~r~~Ae~~L~~-~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~-----~~~~~~~~~f~sl~eLv 74 (94)
T cd00173 1 PWYHGPISREEAEELLKK-KPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDG-----YYLLGEGRSFPSLPELI 74 (94)
T ss_pred CccccCCCHHHHHHHHhc-CCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCC-----eEEecCCCccCCHHHHH
Confidence 599999999999999998 567999999999889999999999999999999987665 4443 78999999999
Q ss_pred hhhhcccC
Q psy10852 365 AFYKVHYL 372 (563)
Q Consensus 365 ~~y~~~~~ 372 (563)
+||+.+.+
T Consensus 75 ~~y~~~~~ 82 (94)
T cd00173 75 EHYQKNPL 82 (94)
T ss_pred HHHhhCcc
Confidence 99998875
No 31
>KOG0197|consensus
Probab=99.41 E-value=4.1e-13 Score=137.11 Aligned_cols=101 Identities=36% Similarity=0.636 Sum_probs=84.1
Q ss_pred CCCCCCCCCccccCCCHHHHHHHHcC-CCCCCeEEEEecCCCCcceEEEEEECC------eEEEEEEEEecCCCcceEEE
Q psy10852 4 TFDPHDRNSWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKENN------KVSHYIINKITNTEQQTCYK 76 (563)
Q Consensus 4 ~~~~~~~~~w~~g~i~r~~ae~~L~~-~~~~G~FLvR~s~~~~~~~~lsv~~~~------~v~h~~I~~~~~~~~~~~~~ 76 (563)
....++.++||||.|+|++||+.|.. ....|+||||+|++.+|+|+|||+... .|+||+|.+.+++ .|.
T Consensus 74 ~~~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~----~~~ 149 (468)
T KOG0197|consen 74 AFIKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGG----GLY 149 (468)
T ss_pred CccccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCC----Cee
Confidence 34678889999999999999965554 555599999999999999999999765 8999999998765 244
Q ss_pred --eC-CceecChHhhHHhhhcccCC-Cccccccccc
Q psy10852 77 --IG-DKTFSDLPSLLAFYKVHYLD-TSPLIKPATK 108 (563)
Q Consensus 77 --~~-~~~F~sl~~Li~~y~~~~~~-~~~L~~p~~~ 108 (563)
+. ...|.+|.+||+||+.+..+ .+.|..||..
T Consensus 150 ~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~~ 185 (468)
T KOG0197|consen 150 PYIDERELFSSLQQLVNYYSKNADGLCTRLRDPCSK 185 (468)
T ss_pred cCCCHHHhhhhHHHHHhhhhccCcchhhcccCchhc
Confidence 65 48999999999999999887 4567777764
No 32
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.40 E-value=5e-13 Score=97.68 Aligned_cols=54 Identities=39% Similarity=0.579 Sum_probs=47.3
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEE-EeCCCCEEEEEeCCeeeeecCCceEEc
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVT-KTNINGQWEGELNGKTGHFPFTHVEFI 537 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~-~~~~~~w~~g~~~g~~G~~P~~~v~~~ 537 (563)
+++|+++|. +.++++|+|++||+|.|+ .+.+++||.|+.+|+.||||++||+++
T Consensus 1 ~~~a~~d~~--~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~~v~~~ 55 (55)
T PF07653_consen 1 YYRAIFDYV--AEDPDELSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSSYVEEI 55 (55)
T ss_dssp EEEESSSBE--SSSTTB-EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGGGEEEH
T ss_pred CEEEeEEEC--CCCCCceEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHHHEEEC
Confidence 478999999 566999999999999999 778889999999999999999999875
No 33
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.37 E-value=7.7e-13 Score=96.65 Aligned_cols=54 Identities=39% Similarity=0.832 Sum_probs=48.4
Q ss_pred eEEEeecccCCCCCCCCCCCCCEEEEE-EecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 387 KVIAKYDFDGNDPDDLPFKKNDILIVV-SKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 387 ~~~a~~~y~~~~~~el~~~~g~~v~v~-~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
+++|+++|.+..+++|+|++||+|.|+ ++.+++||+|++ +|+.||||++||+++
T Consensus 1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~-~g~~G~~P~~~v~~~ 55 (55)
T PF07653_consen 1 YYRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGEN-NGRRGWFPSSYVEEI 55 (55)
T ss_dssp EEEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEE-TTEEEEEEGGGEEEH
T ss_pred CEEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEE-CCcEEEEcHHHEEEC
Confidence 489999999999999999999999999 788889999996 999999999999874
No 34
>KOG3632|consensus
Probab=99.34 E-value=2.3e-12 Score=137.37 Aligned_cols=154 Identities=21% Similarity=0.322 Sum_probs=106.2
Q ss_pred eeeEEEeecccCCC--------CCCCCCCCCCEEEEEEecC-CCcEEEEecCCcEEEEcCCCeEeccCCccccc--cccc
Q psy10852 385 IEKVIAKYDFDGND--------PDDLPFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPVPYVQKYSEGMSILS--LRNL 453 (563)
Q Consensus 385 ~~~~~a~~~y~~~~--------~~el~~~~g~~v~v~~~~~-~~W~~~~~~~g~~G~~P~~~v~~~~~~~~~~~--~~~~ 453 (563)
...++|||||++.. ..||.|++|++|.|+...| +|.+.|+ ++|+.|+||+|+|.++.-.....- -+..
T Consensus 1138 arifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE-~ngr~GlIPcNmvae~~vd~eq~~~r~rqG 1216 (1335)
T KOG3632|consen 1138 ARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGE-LNGRRGLIPCNMVAEQPVDNEQTDRRWRQG 1216 (1335)
T ss_pred ceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecc-cccccccccccccccccCCcHHHHHHHHhc
Confidence 45689999998743 4499999999999998665 6888997 899999999999998875521000 0001
Q ss_pred CCCCCCCCCCCCC-CCcc-cccccccccccceEEeecCCCCCCCC-----CCeeccCCCEEEEEEeCC-CCEEEEEeCCe
Q psy10852 454 HLDSSSHHVPQQQ-TTPV-RKTHLEVKLPAFARVKQVRVPNAYDK-----TALKLEIGDIIKVTKTNI-NGQWEGELNGK 525 (563)
Q Consensus 454 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~y~~~~~~~-----~eL~~~~gd~i~v~~~~~-~~w~~g~~~g~ 525 (563)
.+... .+.+... +... -...+.++.+....+.+||.++..++ .+|.|..||||+|..+.+ +|+++|+++|+
T Consensus 1217 ~lPsv-~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngq 1295 (1335)
T KOG3632|consen 1217 LLPSV-PTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQ 1295 (1335)
T ss_pred cCCCC-CchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCc
Confidence 11000 0000000 0000 00112223445677889999876554 399999999999999887 89999999999
Q ss_pred eeeecCCceEEcCCC
Q psy10852 526 TGHFPFTHVEFIPTN 540 (563)
Q Consensus 526 ~G~~P~~~v~~~~~~ 540 (563)
+|++|++|++.....
T Consensus 1296 kglvpsnfle~p~~e 1310 (1335)
T KOG3632|consen 1296 KGLVPSNFLEAPNAE 1310 (1335)
T ss_pred cCccccccccCCCcc
Confidence 999999999877443
No 35
>KOG4637|consensus
Probab=99.30 E-value=2.4e-12 Score=123.76 Aligned_cols=83 Identities=27% Similarity=0.542 Sum_probs=73.0
Q ss_pred CCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCC--ceecChH
Q psy10852 9 DRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGD--KTFSDLP 86 (563)
Q Consensus 9 ~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~--~~F~sl~ 86 (563)
....|+.+.+.|..||.||+.. .+|+||||.|+. .|.|+|||.+++.|+|+.|.++..| |.+.. ..+.||.
T Consensus 330 ~e~~w~~~~a~r~kAe~llrg~-~dGtFLIR~ss~-~g~yalSV~~~~~V~HClIy~tatG-----~GFa~pyn~y~tlk 402 (464)
T KOG4637|consen 330 DEKTWRVRDANRDKAEELLRGK-PDGTFLIRESSK-GGCYALSVVHDGEVKHCLIYQTATG-----FGFAEPYNLYSTLK 402 (464)
T ss_pred hhhHhHHhhhhHHHHHHHhcCC-CCCeEEEeeccC-CCceEEEEEECCceeeeEEeecccc-----ccccchhHHHHHHH
Confidence 3357999999999999999874 459999999765 8999999999999999999999887 66654 6789999
Q ss_pred hhHHhhhcccCC
Q psy10852 87 SLLAFYKVHYLD 98 (563)
Q Consensus 87 ~Li~~y~~~~~~ 98 (563)
+||.||+.++|.
T Consensus 403 ~lV~hY~h~SLe 414 (464)
T KOG4637|consen 403 ELVLHYQHTSLE 414 (464)
T ss_pred HHHHHHhhhhHH
Confidence 999999998885
No 36
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.21 E-value=1.8e-11 Score=86.64 Aligned_cols=47 Identities=49% Similarity=0.961 Sum_probs=43.2
Q ss_pred EEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecC-CcEEEEcC
Q psy10852 389 IAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNIS-GEVGSIPV 435 (563)
Q Consensus 389 ~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~-g~~G~~P~ 435 (563)
+|+|+|.++.++||+|++||+|.|+.+.+++||.+++.+ ++.||||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 689999999999999999999999999999999998765 79999996
No 37
>KOG0194|consensus
Probab=99.19 E-value=5.4e-11 Score=123.49 Aligned_cols=92 Identities=32% Similarity=0.609 Sum_probs=76.4
Q ss_pred CCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcc---e-EEEEEEC--CeEEEEEEEEecCCCcceEEEeCCceec
Q psy10852 10 RNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGN---Y-VLCVKEN--NKVSHYIINKITNTEQQTCYKIGDKTFS 83 (563)
Q Consensus 10 ~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~---~-~lsv~~~--~~v~h~~I~~~~~~~~~~~~~~~~~~F~ 83 (563)
.++||||.|.|++|+.+|.+ +|+||||.|...+|. + +|||.+. ..++||.|.+..+. +|......|.
T Consensus 48 ~~~~yHG~l~red~~~lL~~---~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~----~~~~~~~~F~ 120 (474)
T KOG0194|consen 48 ELPYYHGLLPREDAEKLLKN---DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNL----FFFEGLRKFP 120 (474)
T ss_pred cCccccccccHhHHHHHhCC---CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCe----eEEeccccCC
Confidence 36999999999999999987 799999999876553 3 8999985 88999999997653 3555669999
Q ss_pred ChHhhHHhhhcccCC----Cccccccccc
Q psy10852 84 DLPSLLAFYKVHYLD----TSPLIKPATK 108 (563)
Q Consensus 84 sl~~Li~~y~~~~~~----~~~L~~p~~~ 108 (563)
|+.+||+||..+... ...|..|+.+
T Consensus 121 si~~li~~~~~~~~~~~~~~~~L~~PI~r 149 (474)
T KOG0194|consen 121 TISELVNYYKFSKLEITGKNFFLKRPIPR 149 (474)
T ss_pred cHHHHHHHHHhcccceeccceeecccccc
Confidence 999999999998764 3347778776
No 38
>KOG2070|consensus
Probab=99.19 E-value=9.6e-12 Score=123.84 Aligned_cols=59 Identities=36% Similarity=0.564 Sum_probs=52.3
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCCCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNET 542 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~~~ 542 (563)
.++|-|.|. ..+.|||+|.+||||+|.+..++|||+|.++|++||||++||..|..+.+
T Consensus 19 vvrAkf~F~--gsNnDELsf~KgDvItVTq~eeGGWWEGTlng~TGWFPsnYV~eik~e~p 77 (661)
T KOG2070|consen 19 VVRAKFNFQ--GSNNDELSFSKGDVITVTQVEEGGWWEGTLNGRTGWFPSNYVREIKSEKP 77 (661)
T ss_pred EEEEEeecc--cCCCceeccccCCEEEEEEeccCcceeccccCccCccchHHHHHHhhcCC
Confidence 566666665 66799999999999999999999999999999999999999999986544
No 39
>KOG1118|consensus
Probab=99.15 E-value=3e-11 Score=113.73 Aligned_cols=62 Identities=26% Similarity=0.347 Sum_probs=55.2
Q ss_pred cccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCC
Q psy10852 477 VKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTN 540 (563)
Q Consensus 477 ~~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~ 540 (563)
.....+||++|+|.|+. ++||.|+.||+|+|+...+.+||+|+..|..|+||.|||++|-+-
T Consensus 303 ~~~~p~cralYdFepen--EgEL~fkeGDlI~l~~QIdenWyeG~~~g~sG~FPvnYv~vlvpl 364 (366)
T KOG1118|consen 303 QMDQPCCRALYDFEPEN--EGELDFKEGDLITLTNQIDENWYEGEKHGESGMFPVNYVEVLVPL 364 (366)
T ss_pred cccchhheeeeccCCCC--CCccCcccCceeeehhhcCcchhhheecCccCccccceeEEeccC
Confidence 33445799999999555 889999999999999999999999999999999999999998653
No 40
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.11 E-value=1.3e-10 Score=82.31 Aligned_cols=47 Identities=49% Similarity=0.961 Sum_probs=43.4
Q ss_pred eecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCC-CeeeEEec
Q psy10852 114 IAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNIS-GEVGSIPV 160 (563)
Q Consensus 114 ~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~-g~~G~fP~ 160 (563)
+|+|+|.++.+++|+|++||+|.|+++.+++||.+++.+ ++.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 589999999999999999999999999999999999875 79999995
No 41
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=99.09 E-value=2.7e-10 Score=84.16 Aligned_cols=56 Identities=39% Similarity=0.811 Sum_probs=51.3
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
..++|+|+|.+..+++|+|++||+|.|+.+.+++||.++..+++.||||++||+.+
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~~ 58 (58)
T smart00326 3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEEI 58 (58)
T ss_pred cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEEC
Confidence 36899999999999999999999999999988999999866699999999999763
No 42
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=99.08 E-value=3e-10 Score=82.61 Aligned_cols=52 Identities=44% Similarity=0.926 Sum_probs=48.4
Q ss_pred EEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeE
Q psy10852 388 VIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQ 439 (563)
Q Consensus 388 ~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~ 439 (563)
++|+|+|.+..+++|+|.+||+|.|+...+++||.+++.+++.||||++||+
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~ 53 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE 53 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence 6899999999999999999999999999888999998666699999999986
No 43
>KOG3632|consensus
Probab=99.05 E-value=2.7e-10 Score=121.86 Aligned_cols=150 Identities=21% Similarity=0.304 Sum_probs=100.1
Q ss_pred cceeeeecccCCCCC--------CCCCcCCCCCEEEEEEecC-CCeeEEeeCCCeeeEEecCceeecccccccccccccc
Q psy10852 109 TIEKVIAKYDFDGND--------PDDLPFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLH 179 (563)
Q Consensus 109 ~~~~~~a~~d~~~~~--------~~eLs~~~Gd~i~vl~~~~-~~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~ 179 (563)
+.++++|+|||.... ..||+|++|+||.|+...| ++.|+|. ++|+.|++|+|+|.+..-.-+....+ -
T Consensus 1137 parifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE-~ngr~GlIPcNmvae~~vd~eq~~~r--~ 1213 (1335)
T KOG3632|consen 1137 PARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGE-LNGRRGLIPCNMVAEQPVDNEQTDRR--W 1213 (1335)
T ss_pred cceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecc-cccccccccccccccccCCcHHHHHH--H
Confidence 356799999997743 5699999999999998655 6778886 99999999999999875432111101 0
Q ss_pred cCCCCC---C----CCCCCCCccccccccccCccceeeeeccccC-----CCCCCceeeccCCEEEEeeecC-CCceeee
Q psy10852 180 LDSSSH---H----VPQQQTTPVRKTHLEVKLPAFARVKQVRVPN-----AYDKTALKLEIGDIIKVTKTNI-NGQWEGE 246 (563)
Q Consensus 180 ~~g~~~---~----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----a~~~~eLsf~~Gd~v~V~~~~~-~~W~~g~ 246 (563)
.+|..- + .-.......+ .+....|-..-+.++|.+. ...+.+|.|..||||.|+.+.| +|.++|+
T Consensus 1214 rqG~lPsv~~~e~~~gs~~s~g~~--k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGe 1291 (1335)
T KOG3632|consen 1214 RQGLLPSVPTEEMRKGSAFSDGQQ--KMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGE 1291 (1335)
T ss_pred HhccCCCCCchhhhcccccCCCCc--cccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccc
Confidence 011000 0 0000000000 1111122234455666663 3345689999999999999876 5788999
Q ss_pred eCCceeeccccceeecC
Q psy10852 247 LNGKTGHFPFTHVEFIP 263 (563)
Q Consensus 247 ~~g~~G~~P~~~ve~~~ 263 (563)
++|+.|.+|++|++...
T Consensus 1292 lngqkglvpsnfle~p~ 1308 (1335)
T KOG3632|consen 1292 LNGQKGLVPSNFLEAPN 1308 (1335)
T ss_pred cCCccCccccccccCCC
Confidence 99999999999998774
No 44
>KOG2199|consensus
Probab=99.03 E-value=6.1e-11 Score=115.57 Aligned_cols=58 Identities=29% Similarity=0.669 Sum_probs=53.2
Q ss_pred cceeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecc
Q psy10852 109 TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYS 167 (563)
Q Consensus 109 ~~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~ 167 (563)
..++++|+|||++.+++||+|++||||.|++..+.+||.|. .++..|+||+|||...-
T Consensus 214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~-~~~~~GlFPsnfVT~~l 271 (462)
T KOG2199|consen 214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGE-NHRGIGLFPSNFVTADL 271 (462)
T ss_pred cchhhhhhhcccccCCCccceecCcEEEEcccCCcchhccc-cCCcccccchhhhhhhh
Confidence 35679999999999999999999999999999999999997 77889999999998653
No 45
>KOG1930|consensus
Probab=99.02 E-value=2.6e-10 Score=111.85 Aligned_cols=92 Identities=29% Similarity=0.518 Sum_probs=75.6
Q ss_pred CCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEE---------------CCeEEEEEEEEecCCCcce
Q psy10852 9 DRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKE---------------NNKVSHYIINKITNTEQQT 73 (563)
Q Consensus 9 ~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~---------------~~~v~h~~I~~~~~~~~~~ 73 (563)
-+.-||..+|+|++|-+||+++.. |+||||+|.+..|.|-|.++. +.-|+||.|+....|
T Consensus 210 TSKyWYKP~isREQAIalLrdkeP-GtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkG---- 284 (483)
T KOG1930|consen 210 TSKYWYKPNISREQAIALLRDKEP-GTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKG---- 284 (483)
T ss_pred ccccccCCCCCHHHHHHHhhcCCC-CeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCc----
Confidence 356799999999999999998655 999999999999999999974 135999999988766
Q ss_pred EEEeC----CceecChHhhHHhhhcccCC-Cccccccc
Q psy10852 74 CYKIG----DKTFSDLPSLLAFYKVHYLD-TSPLIKPA 106 (563)
Q Consensus 74 ~~~~~----~~~F~sl~~Li~~y~~~~~~-~~~L~~p~ 106 (563)
..|- +..|.||..||-.|+-.+|. .|.|..|-
T Consensus 285 -VkLKGC~nEP~FGSLSALV~QHSIt~LALPckL~iP~ 321 (483)
T KOG1930|consen 285 -VKLKGCDNEPVFGSLSALVYQHSITALALPCKLVIPD 321 (483)
T ss_pred -eeccCCCCCCccchhHHHHhhccchhhhcceeEeccC
Confidence 7773 47999999999988877664 45555443
No 46
>KOG2070|consensus
Probab=99.02 E-value=9.8e-11 Score=116.75 Aligned_cols=57 Identities=33% Similarity=0.746 Sum_probs=53.7
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
-.++|.|.|.+.+.+||+|.+||+|+|....+.|||.|+ .+|+.||||++||..+..
T Consensus 18 LvvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGT-lng~TGWFPsnYV~eik~ 74 (661)
T KOG2070|consen 18 LVVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGT-LNGRTGWFPSNYVREIKS 74 (661)
T ss_pred eEEEEEeecccCCCceeccccCCEEEEEEeccCcceecc-ccCccCccchHHHHHHhh
Confidence 368999999999999999999999999999999999997 899999999999998874
No 47
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=99.00 E-value=8.4e-10 Score=81.44 Aligned_cols=54 Identities=37% Similarity=0.532 Sum_probs=48.9
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeC-CeeeeecCCceEEc
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELN-GKTGHFPFTHVEFI 537 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~-g~~G~~P~~~v~~~ 537 (563)
.++|+++|.+ ..+++|+|++||+|.|+...++|||.++.. |+.||||.+||+.+
T Consensus 4 ~~~a~~~~~~--~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~~ 58 (58)
T smart00326 4 QVRALYDYTA--QDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEEI 58 (58)
T ss_pred EEEEeeeeCC--CCCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEEC
Confidence 6789999995 558899999999999999888999999988 99999999999864
No 48
>KOG2199|consensus
Probab=99.00 E-value=8.7e-11 Score=114.52 Aligned_cols=57 Identities=30% Similarity=0.680 Sum_probs=53.0
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEecc
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYS 442 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~ 442 (563)
..+++|||||.+..++||+|++||+|+|++..+..||+|. ..+..|+||.|||...-
T Consensus 215 ~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~-~~~~~GlFPsnfVT~~l 271 (462)
T KOG2199|consen 215 VRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGE-NHRGIGLFPSNFVTADL 271 (462)
T ss_pred chhhhhhhcccccCCCccceecCcEEEEcccCCcchhccc-cCCcccccchhhhhhhh
Confidence 4589999999999999999999999999999999999998 68889999999998655
No 49
>KOG0162|consensus
Probab=98.98 E-value=6.6e-10 Score=115.65 Aligned_cols=60 Identities=28% Similarity=0.399 Sum_probs=53.1
Q ss_pred ccccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEc
Q psy10852 476 EVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFI 537 (563)
Q Consensus 476 ~~~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~ 537 (563)
.......|.|+|+|. +++.+||+|++||+|.|+.+..+|||.|+++|++||||.+||+.+
T Consensus 1047 ~~~k~p~~~A~Y~y~--gq~~dEls~~~~diIei~~edpSGWw~gk~~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1047 KPPKNPVCEALYDYP--GQDVDELSFKKGDIIEIMREDPSGWWLGKLNGKEGLFPGNYVTEY 1106 (1106)
T ss_pred CCCCCcceeeeccCC--CCCcccccccCCCEEEEeccCCCcchhhccCCccccccccccccC
Confidence 334446799999999 557999999999999999999999999999999999999999753
No 50
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.95 E-value=1.7e-09 Score=78.56 Aligned_cols=51 Identities=39% Similarity=0.574 Sum_probs=46.0
Q ss_pred eEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCC-eeeeecCCceE
Q psy10852 483 ARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNG-KTGHFPFTHVE 535 (563)
Q Consensus 483 ~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g-~~G~~P~~~v~ 535 (563)
++++++|.++ .+++|+|.+||+|.|++..++|||.++..+ +.||||.+||+
T Consensus 2 ~~a~~~~~~~--~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~ 53 (54)
T cd00174 2 VRALYDYDAR--DPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE 53 (54)
T ss_pred EEEEEeeCCC--CCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence 6789999954 488999999999999998889999999876 99999999986
No 51
>KOG1118|consensus
Probab=98.88 E-value=7.3e-10 Score=104.57 Aligned_cols=58 Identities=29% Similarity=0.602 Sum_probs=54.0
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
...|+|+|+|++++++||.|++||+|.|+...|++||.|. ..|..|+||.|||+++.+
T Consensus 306 ~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~-~~g~sG~FPvnYv~vlvp 363 (366)
T KOG1118|consen 306 QPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGE-KHGESGMFPVNYVEVLVP 363 (366)
T ss_pred chhheeeeccCCCCCCccCcccCceeeehhhcCcchhhhe-ecCccCccccceeEEecc
Confidence 3469999999999999999999999999999999999998 789999999999998754
No 52
>KOG0162|consensus
Probab=98.71 E-value=8.2e-09 Score=107.70 Aligned_cols=55 Identities=38% Similarity=0.808 Sum_probs=52.0
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
..|.|+|+|.++..+||+|++||+|.++.++..|||.|+ .+|+.||||.+||.++
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk-~~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGK-LNGKEGLFPGNYVTEY 1106 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhc-cCCccccccccccccC
Confidence 579999999999999999999999999999999999998 8999999999999753
No 53
>KOG2856|consensus
Probab=98.69 E-value=3.6e-09 Score=102.08 Aligned_cols=56 Identities=34% Similarity=0.604 Sum_probs=50.7
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecC-CCcEEEEecCCcEEEEcCCCeEec
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~-~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
.+++|||||.++..+||+|++||.|.+++..| .||+.|+...|+.|++|+|||+.+
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~ 471 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI 471 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence 57999999999999999999999999998776 499999855699999999999865
No 54
>KOG2546|consensus
Probab=98.67 E-value=5e-09 Score=103.28 Aligned_cols=56 Identities=29% Similarity=0.321 Sum_probs=50.8
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPT 539 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~ 539 (563)
.+.++|+|+... .+||+|.+|-+|.|++++|+|||+|.++|-.|+||.|||+.+..
T Consensus 425 kVv~iydy~~~K--ddeLsf~E~ailyv~kknddgw~EgV~~~VTglFpgnyve~~~~ 480 (483)
T KOG2546|consen 425 KVVAIYDYTADK--DDELSFAEGAILYVLKKNDDGWYEGVQDGVTGLFPGNYVEPLKA 480 (483)
T ss_pred HHHhhccccccc--ccccccccccEEEEEEecCCcchhheecCcceeccCcccccccc
Confidence 567899999544 88999999999999999999999999999999999999998753
No 55
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=98.54 E-value=3.5e-06 Score=78.98 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=61.5
Q ss_pred CccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEE-CCeEEEEEEEEecCCC----cceEEEeCCceecChH
Q psy10852 12 SWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKE-NNKVSHYIINKITNTE----QQTCYKIGDKTFSDLP 86 (563)
Q Consensus 12 ~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~-~~~v~h~~I~~~~~~~----~~~~~~~~~~~F~sl~ 86 (563)
|-|+ +++-.+|+++|..... |+++||.|+......+|+++. ++-..|+.|...+... |. .+.+++..|.+|+
T Consensus 39 P~F~-n~~~~qAe~~L~~~~~-Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~-~L~i~~~~yeDLD 115 (220)
T PF14633_consen 39 PLFK-NFNYKQAEEYLADQDV-GEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGK-TLKIGGEEYEDLD 115 (220)
T ss_dssp TTEE-SS-HHHHHHHHCCS-T-T-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SS-EEEETTEEESSHH
T ss_pred CCcc-CCCHHHHHHHHhcCCC-CCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCc-EEEECCeEECCHH
Confidence 5566 8999999999988654 999999999866668888875 6778899999765321 23 3778889999999
Q ss_pred hhHHhhhcc
Q psy10852 87 SLLAFYKVH 95 (563)
Q Consensus 87 ~Li~~y~~~ 95 (563)
|||.-|...
T Consensus 116 Eii~r~V~p 124 (220)
T PF14633_consen 116 EIIARHVEP 124 (220)
T ss_dssp HHHHHCHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 56
>KOG2546|consensus
Probab=98.47 E-value=6.1e-08 Score=95.75 Aligned_cols=57 Identities=33% Similarity=0.702 Sum_probs=53.3
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEecc
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYS 442 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~ 442 (563)
.+.++++|||.+..++||+|.+|-+|.|+.+.|+|||+|. .+|..|+||.|||+++.
T Consensus 423 LEkVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV-~~~VTglFpgnyve~~~ 479 (483)
T KOG2546|consen 423 LEKVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGV-QDGVTGLFPGNYVEPLK 479 (483)
T ss_pred HHHHHhhcccccccccccccccccEEEEEEecCCcchhhe-ecCcceeccCccccccc
Confidence 4568999999999999999999999999999999999996 89999999999998774
No 57
>KOG2856|consensus
Probab=98.45 E-value=3.5e-08 Score=95.44 Aligned_cols=55 Identities=24% Similarity=0.344 Sum_probs=49.4
Q ss_pred cceEEeecCCCCCCCCCCeeccCCCEEEEEEeCC-CCEEEEEeC-CeeeeecCCceEEc
Q psy10852 481 AFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI-NGQWEGELN-GKTGHFPFTHVEFI 537 (563)
Q Consensus 481 ~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~~g~~~-g~~G~~P~~~v~~~ 537 (563)
..++|||||.++. .+||+|++||.+..++..| -||..|+++ |+.|++|+|||+-+
T Consensus 415 v~vraLYDY~gqE--~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~ 471 (472)
T KOG2856|consen 415 VRVRALYDYAGQE--GDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI 471 (472)
T ss_pred eeEEeeeccCccc--ccchhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence 4689999999655 8899999999999999776 799999998 99999999999854
No 58
>KOG3751|consensus
Probab=98.35 E-value=2.5e-07 Score=93.77 Aligned_cols=91 Identities=30% Similarity=0.543 Sum_probs=78.4
Q ss_pred CCCCCCCCccccCCCHHHHHHHHcC-CCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC--Cce
Q psy10852 5 FDPHDRNSWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG--DKT 81 (563)
Q Consensus 5 ~~~~~~~~w~~g~i~r~~ae~~L~~-~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~--~~~ 81 (563)
+..|-++.||||.|+|+++..++++ +-.+|-||+|+|.+++-.|++++.+..+|+||+|...+. +|..+|.+. ...
T Consensus 513 ~~~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~-~~~~~~t~~~g~t~ 591 (622)
T KOG3751|consen 513 QAIHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVED-DGCTFFTLDDGPTK 591 (622)
T ss_pred hhhcccccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCC-CCceeeccCCCCcc
Confidence 5567889999999999999999988 467899999999999999999999999999999999665 455445553 389
Q ss_pred ecChHhhHHhhhccc
Q psy10852 82 FSDLPSLLAFYKVHY 96 (563)
Q Consensus 82 F~sl~~Li~~y~~~~ 96 (563)
|.++..|+++|.-++
T Consensus 592 ~sd~~ql~~~~ql~k 606 (622)
T KOG3751|consen 592 FSDLIQLVEFYQLNK 606 (622)
T ss_pred ccccccccchhhcCC
Confidence 999999999998773
No 59
>KOG3655|consensus
Probab=98.29 E-value=2.1e-07 Score=93.74 Aligned_cols=57 Identities=32% Similarity=0.674 Sum_probs=53.1
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
.-.++|+|+|+|.++.||+|..+|+|.+|...++|||.|...+|..|+||+|||+.+
T Consensus 427 ~q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li 483 (484)
T KOG3655|consen 427 PQTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI 483 (484)
T ss_pred CCCccccccccccCCcccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence 347899999999999999999999999999999999999877999999999999865
No 60
>KOG3875|consensus
Probab=98.29 E-value=1.8e-07 Score=88.76 Aligned_cols=59 Identities=34% Similarity=0.563 Sum_probs=52.5
Q ss_pred ceeeeecccCCCCCCCCCcCCCCCEEEEEEecC-----CCeeEEeeC-CCeeeEEecCceeeccc
Q psy10852 110 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE-----EHWWTAQNI-SGEVGSIPVPYVQKYSE 168 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~-----~~ww~g~~~-~g~~G~fP~~yv~~~~~ 168 (563)
.+.++|+|||.++++.||+|++||++.|+.|.+ .+||..+.. ++.+||||.|||+.+..
T Consensus 268 ~~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r 332 (362)
T KOG3875|consen 268 HEFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR 332 (362)
T ss_pred HHHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence 477999999999999999999999999988765 469999887 77899999999998864
No 61
>KOG3655|consensus
Probab=98.20 E-value=8.1e-07 Score=89.60 Aligned_cols=58 Identities=31% Similarity=0.433 Sum_probs=52.5
Q ss_pred cccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEe-CCeeeeecCCceEEcC
Q psy10852 479 LPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGEL-NGKTGHFPFTHVEFIP 538 (563)
Q Consensus 479 ~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~-~g~~G~~P~~~v~~~~ 538 (563)
.+..++|+++|. |-+..||+|.++|+|++|...+.|||.|.. +|..|+||+|||++|.
T Consensus 426 ~~q~A~A~~dyq--AAddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li~ 484 (484)
T KOG3655|consen 426 EPQTARALYDYQ--AADDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELIE 484 (484)
T ss_pred cCCCcccccccc--ccCCcccccCCccccccccccCCccccccCCCCCcCcccccccccCC
Confidence 567889999998 777899999999999999999999999987 5999999999998873
No 62
>KOG3875|consensus
Probab=98.20 E-value=2.5e-07 Score=87.86 Aligned_cols=58 Identities=34% Similarity=0.586 Sum_probs=51.8
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecC-----CCcEEEEec-CCcEEEEcCCCeEeccC
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE-----EHWWTAQNI-SGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~-----~~W~~~~~~-~g~~G~~P~~~v~~~~~ 443 (563)
..|+|+|||.+.++.||+|++||++.|..|.+ ..||..... ++..||||.|||+.+..
T Consensus 269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r 332 (362)
T KOG3875|consen 269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR 332 (362)
T ss_pred HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence 57899999999999999999999999999875 358888766 78999999999998876
No 63
>KOG0515|consensus
Probab=98.20 E-value=6.1e-07 Score=91.02 Aligned_cols=57 Identities=35% Similarity=0.751 Sum_probs=50.6
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCC---CcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEE---HWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~---~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
..+-|+|||.++..+||+|.+||.++|+.++|+ +||.++ .+|+.|+||.+|+-.+..
T Consensus 684 G~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~-lng~eGyVPRnylgLyPr 743 (752)
T KOG0515|consen 684 GVVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWAR-LNGEEGYVPRNYLGLYPR 743 (752)
T ss_pred ceeEEeecccccccccccccCCceeEEEecCCcchhhhhhHh-hcCcccccchhhhhcCcc
Confidence 357899999999999999999999999999753 799998 899999999999976543
No 64
>KOG0515|consensus
Probab=98.19 E-value=5.6e-07 Score=91.28 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=49.8
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCC---CCEEEEEeCCeeeeecCCceEEcCCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI---NGQWEGELNGKTGHFPFTHVEFIPTN 540 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~---~~w~~g~~~g~~G~~P~~~v~~~~~~ 540 (563)
.+.+++||. ++..|||+|++||.++|+++.+ ..||.++++|++|+||.+|+-+...-
T Consensus 685 ~vYAlwdYe--aqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyPri 744 (752)
T KOG0515|consen 685 VVYALWDYE--AQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYPRI 744 (752)
T ss_pred eeEEeeccc--ccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCccc
Confidence 477899998 6679999999999999999865 68999999999999999999876543
No 65
>KOG1930|consensus
Probab=98.17 E-value=2.3e-06 Score=84.56 Aligned_cols=84 Identities=29% Similarity=0.508 Sum_probs=68.6
Q ss_pred CCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeC---------------CeeEEEEEeeecCCCcce
Q psy10852 284 DRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKEN---------------NKVSHYIINKITNTEQQT 348 (563)
Q Consensus 284 ~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~---------------~~v~h~~I~~~~~~~~~~ 348 (563)
.++-||..+|+|++|.++|..+. .|+|+||+|.+-.|.|-|.++.. .-|+||+|+....+
T Consensus 210 TSKyWYKP~isREQAIalLrdke-PGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkG---- 284 (483)
T KOG1930|consen 210 TSKYWYKPNISREQAIALLRDKE-PGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKG---- 284 (483)
T ss_pred ccccccCCCCCHHHHHHHhhcCC-CCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCc----
Confidence 35689999999999999998854 49999999999999999988851 23889999988776
Q ss_pred eEEeC----CcccCChhhHHhhhhcccCC
Q psy10852 349 CYKIG----DKTFSDLPSLLAFYKVHYLD 373 (563)
Q Consensus 349 ~~~i~----~~~f~sl~~lv~~y~~~~~~ 373 (563)
.++. ++.|.||..||-.+.-..|.
T Consensus 285 -VkLKGC~nEP~FGSLSALV~QHSIt~LA 312 (483)
T KOG1930|consen 285 -VKLKGCDNEPVFGSLSALVYQHSITALA 312 (483)
T ss_pred -eeccCCCCCCccchhHHHHhhccchhhh
Confidence 7774 48999999999765443333
No 66
>KOG1702|consensus
Probab=98.08 E-value=3.5e-06 Score=75.19 Aligned_cols=56 Identities=25% Similarity=0.264 Sum_probs=50.3
Q ss_pred ccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEe--CCeeeeecCCceEEc
Q psy10852 480 PAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGEL--NGKTGHFPFTHVEFI 537 (563)
Q Consensus 480 ~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~--~g~~G~~P~~~v~~~ 537 (563)
...+++.+||. |++++|++|.-||-|.-....++||.+|.+ +|..|.+|+|||+.+
T Consensus 207 gktyra~ydys--aqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~v 264 (264)
T KOG1702|consen 207 GKTYRAFYDYS--AQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEFV 264 (264)
T ss_pred CccchhhccCc--ccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheeeC
Confidence 35789999999 778999999999999999999999999976 599999999999864
No 67
>KOG1843|consensus
Probab=98.04 E-value=2e-06 Score=84.88 Aligned_cols=55 Identities=36% Similarity=0.758 Sum_probs=50.6
Q ss_pred ceeeeecccCCCCCCCCCcCCCCCEEEEEEecC--CCeeEEeeCCCeeeEEecCceee
Q psy10852 110 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE--EHWWTAQNISGEVGSIPVPYVQK 165 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~--~~ww~g~~~~g~~G~fP~~yv~~ 165 (563)
...++++|+|..+.+.+|+|++||||.++++.+ ..||.++ .++++|+||+|||+.
T Consensus 416 ~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr-~~~~egifPanyv~~ 472 (473)
T KOG1843|consen 416 PNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGR-GNGYEGIFPANYVSL 472 (473)
T ss_pred cceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhh-ccccccccccceecc
Confidence 346899999999999999999999999999876 6899998 999999999999964
No 68
>KOG2222|consensus
Probab=98.03 E-value=6.7e-07 Score=89.50 Aligned_cols=60 Identities=28% Similarity=0.407 Sum_probs=54.0
Q ss_pred ccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCCC
Q psy10852 480 PAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNE 541 (563)
Q Consensus 480 ~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~~ 541 (563)
..+++++.||. ..+.+||.|+++|+|+|++.-+...|.|+++|-+||||+-||+++++..
T Consensus 548 ~krakal~df~--r~dddelgfrkndiitiisekdehcwvgelnglrgwfpakfvellder~ 607 (848)
T KOG2222|consen 548 AKRAKALHDFA--REDDDELGFRKNDIITIISEKDEHCWVGELNGLRGWFPAKFVELLDERG 607 (848)
T ss_pred hHHHHHHhhhh--hccccccccccccEEEEeecCCcceeeeccccccccchHHHHHHHHhcc
Confidence 34688899987 6678899999999999999999999999999999999999999997653
No 69
>KOG1702|consensus
Probab=98.02 E-value=3.3e-06 Score=75.41 Aligned_cols=57 Identities=23% Similarity=0.453 Sum_probs=51.1
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEe-cCCcEEEEcCCCeEec
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQN-ISGEVGSIPVPYVQKY 441 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~-~~g~~G~~P~~~v~~~ 441 (563)
...++|+|||.|+..+|++|.-||.|..+...++||-+|+. .+|..|..|+||++.+
T Consensus 207 gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~v 264 (264)
T KOG1702|consen 207 GKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEFV 264 (264)
T ss_pred CccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheeeC
Confidence 45799999999999999999999999999999999988863 3899999999999853
No 70
>KOG3697|consensus
Probab=98.00 E-value=6.3e-06 Score=77.58 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=71.9
Q ss_pred CCCccccCCCHHHHHHHHcCCCCCCeEEEEecC-----------------------------------------------
Q psy10852 10 RNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSN----------------------------------------------- 42 (563)
Q Consensus 10 ~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~----------------------------------------------- 42 (563)
..+||||.++++.+++.|.. +|.|++|.+.
T Consensus 200 k~pp~~g~l~~~~~q~~l~~---~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~~ 276 (345)
T KOG3697|consen 200 KMPPPGGFLDTRLKQRPLAP---DAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDET 276 (345)
T ss_pred cCCCCCCccchhhhhccCCc---ccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhcccc
Confidence 46999999999999999975 6899988643
Q ss_pred CCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecChHhhHHhhhcccCC------Cccccccccc
Q psy10852 43 TILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLD------TSPLIKPATK 108 (563)
Q Consensus 43 ~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~~~~------~~~L~~p~~~ 108 (563)
+.+|.|+|+=..+++.+|..+.--+ | . .+..++.|+|+..||+|+..+.|. .-+|+.|+.+
T Consensus 277 ~~~gqyvltgl~~~~~khlllvdpe-g--v--vrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r 343 (345)
T KOG3697|consen 277 TTPGQYVLTGLQSGQPKHLLLVDPE-G--V--VRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVER 343 (345)
T ss_pred CCCccEEEecccCCCcceEEEECCc-c--c--eecccchhhHHHHHHHHhhhccCceecCcchhhhhCcccc
Confidence 4578899998899999999876432 2 2 566679999999999999998763 2356667654
No 71
>KOG1843|consensus
Probab=98.00 E-value=3e-06 Score=83.57 Aligned_cols=56 Identities=36% Similarity=0.744 Sum_probs=51.1
Q ss_pred ceeeEEEeecccCCCCCCCCCCCCCEEEEEEecC--CCcEEEEecCCcEEEEcCCCeEe
Q psy10852 384 TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE--EHWWTAQNISGEVGSIPVPYVQK 440 (563)
Q Consensus 384 ~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~--~~W~~~~~~~g~~G~~P~~~v~~ 440 (563)
....+.|+|+|.++.+++|+|++||+|.++.+.+ +.||.++ .++++|+||+|||++
T Consensus 415 ~~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr-~~~~egifPanyv~~ 472 (473)
T KOG1843|consen 415 EPNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGR-GNGYEGIFPANYVSL 472 (473)
T ss_pred CcceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhh-ccccccccccceecc
Confidence 4558999999999999999999999999999886 4799997 899999999999964
No 72
>KOG3523|consensus
Probab=97.85 E-value=2e-06 Score=88.98 Aligned_cols=62 Identities=29% Similarity=0.375 Sum_probs=53.6
Q ss_pred cccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEe--CCeeeeecCCceEEcCCCCC
Q psy10852 479 LPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGEL--NGKTGHFPFTHVEFIPTNET 542 (563)
Q Consensus 479 ~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~--~g~~G~~P~~~v~~~~~~~~ 542 (563)
....+.++..|. +..++||++..+|++.|+.+.++||++|+. +|.+||||.+||+.|.+..+
T Consensus 607 dcpQv~~~~sy~--a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~~~ 670 (695)
T KOG3523|consen 607 DCPQVQCVHSYK--AKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNPHT 670 (695)
T ss_pred CCChhheeeccc--cCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCHHH
Confidence 344577888888 556999999999999999999999999976 59999999999999977554
No 73
>KOG0194|consensus
Probab=97.84 E-value=6.5e-05 Score=78.65 Aligned_cols=91 Identities=32% Similarity=0.611 Sum_probs=73.0
Q ss_pred CCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcc---e-EEEEEeC--CeeEEEEEeeecCCCcceeEEeCCcccCC
Q psy10852 286 NSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGN---Y-VLCVKEN--NKVSHYIINKITNTEQQTCYKIGDKTFSD 359 (563)
Q Consensus 286 ~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~---~-~ls~~~~--~~v~h~~I~~~~~~~~~~~~~i~~~~f~s 359 (563)
.+||||-+.|++++.+|.. +|.||||.|...++. + .||+... .+++|+.|...++. .|......|++
T Consensus 49 ~~~yHG~l~red~~~lL~~---~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~----~~~~~~~~F~s 121 (474)
T KOG0194|consen 49 LPYYHGLLPREDAEKLLKN---DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNL----FFFEGLRKFPT 121 (474)
T ss_pred CccccccccHhHHHHHhCC---CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCe----eEEeccccCCc
Confidence 5999999999999999987 699999999987663 3 7888874 78899999987652 24555699999
Q ss_pred hhhHHhhhhcccCCC----Ccccccccc
Q psy10852 360 LPSLLAFYKVHYLDT----SPLIKPATK 383 (563)
Q Consensus 360 l~~lv~~y~~~~~~~----~~l~~P~~~ 383 (563)
+.+||.||..+...- ..|..|+++
T Consensus 122 i~~li~~~~~~~~~~~~~~~~L~~PI~r 149 (474)
T KOG0194|consen 122 ISELVNYYKFSKLEITGKNFFLKRPIPR 149 (474)
T ss_pred HHHHHHHHHhcccceeccceeecccccc
Confidence 999999999876543 236677765
No 74
>KOG4773|consensus
Probab=97.79 E-value=4e-06 Score=81.22 Aligned_cols=151 Identities=17% Similarity=0.137 Sum_probs=94.8
Q ss_pred eEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEe--cCCcEEEEcCCCeEeccCCcccccccccCCCCCCCCCCC
Q psy10852 387 KVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQN--ISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQ 464 (563)
Q Consensus 387 ~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~--~~g~~G~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (563)
.+++.|||.++..+++.-..... ..|+.... .-|..|++|-.||.+......+...... .+..-.-++.
T Consensus 91 pA~v~fdfkqe~Ae~r~~~ln~y--------~e~LlslPi~~l~~p~l~~fffvsp~D~~dVpeai~r~-~Prt~~~ks~ 161 (386)
T KOG4773|consen 91 PAIVYFDFKQEIAEERIPALNAY--------CEWLLSLPIGRLGGPGLRPFFFVSPYDSEDVPEAIRRL-RPRTRKWKSD 161 (386)
T ss_pred cceeEechhhhhhhhhhHHHHHH--------HHHHHhcchhhcCCCCceeeeeeccchHhhhhHHHHhc-Cchhhhcccc
Confidence 57888888888777654332110 34655432 1356789999999887733112111100 0000000000
Q ss_pred CCCCcccccc-cccccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCCCCC
Q psy10852 465 QQTTPVRKTH-LEVKLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNETS 543 (563)
Q Consensus 465 ~~~~~~~~~~-~~~~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~~~~ 543 (563)
. .+ ..+. ........++++++|..+. ..||.|.+||++.++.+.+.+||.|...|.+||+|.+|++.++.....
T Consensus 162 ~-~s--kasni~~~~~~q~~~a~~df~gns--~~EL~l~agdV~~~~~r~ek~W~~gk~R~~~g~yp~sF~~~ld~fpee 236 (386)
T KOG4773|consen 162 G-VS--KASNIVLGMAAQRAEASFDFPGNS--KLELNLVAGDVEFLLSRDEKYWLLGKVRGLTGYYPDSFVKQLDDFPEE 236 (386)
T ss_pred c-cC--ccccccchhhhHHHHhhccCCCCc--cceeeeehhhHHHHHhhcccceeeeeeccccccccHHhhhhhccCccc
Confidence 0 00 0000 0111224678899998665 779999999999999999999999999999999999999999877665
Q ss_pred CCCCCCCc
Q psy10852 544 VETNGNGD 551 (563)
Q Consensus 544 ~~~~~~~~ 551 (563)
...+++..
T Consensus 237 D~~~nw~r 244 (386)
T KOG4773|consen 237 DAGTNWLR 244 (386)
T ss_pred cCCCCccc
Confidence 66666654
No 75
>KOG2528|consensus
Probab=97.73 E-value=1.9e-05 Score=79.09 Aligned_cols=58 Identities=31% Similarity=0.532 Sum_probs=53.1
Q ss_pred eEEEeecccCCCCCCCCCCCCCEEEEEEec-CCCcEEEEecCCcEEEEcCCCeEeccCC
Q psy10852 387 KVIAKYDFDGNDPDDLPFKKNDILIVVSKD-EEHWWTAQNISGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 387 ~~~a~~~y~~~~~~el~~~~g~~v~v~~~~-~~~W~~~~~~~g~~G~~P~~~v~~~~~~ 444 (563)
+++|+|+|.++...||++..||++.+.... .+|||.|.+..|..|+||++||+.+...
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~~a 62 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTRLA 62 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeeccc
Confidence 678999999999999999999999998866 4799999999999999999999988744
No 76
>KOG3725|consensus
Probab=97.66 E-value=9.2e-06 Score=75.16 Aligned_cols=56 Identities=29% Similarity=0.208 Sum_probs=50.4
Q ss_pred ccceEEeecCCCCCCCCCCeeccCCCEEEEEEeC--CCCEEEEEeCCeeeeecCCceEEc
Q psy10852 480 PAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTN--INGQWEGELNGKTGHFPFTHVEFI 537 (563)
Q Consensus 480 ~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~--~~~w~~g~~~g~~G~~P~~~v~~~ 537 (563)
...++|++||. +....||++-..|+|+|.+.. |.+|..|+.++++|-+|..|++.+
T Consensus 317 trkArVlyDYd--Aa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlELL 374 (375)
T KOG3725|consen 317 TRKARVLYDYD--AALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLELL 374 (375)
T ss_pred ccceeeeeccc--ccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHhc
Confidence 45799999999 667889999999999998865 589999999999999999999876
No 77
>KOG3523|consensus
Probab=97.58 E-value=7.6e-06 Score=84.78 Aligned_cols=58 Identities=24% Similarity=0.558 Sum_probs=52.7
Q ss_pred eEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-CCcEEEEcCCCeEeccCC
Q psy10852 387 KVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 387 ~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~g~~G~~P~~~v~~~~~~ 444 (563)
.+.++..|.+..++||+++.+|+|.|+.+..+||++|... +|..||||.+||+.+...
T Consensus 610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~ 668 (695)
T KOG3523|consen 610 QVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP 668 (695)
T ss_pred hhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence 4678899999999999999999999999999999999644 899999999999988654
No 78
>KOG2222|consensus
Probab=97.43 E-value=1.9e-05 Score=79.41 Aligned_cols=59 Identities=34% Similarity=0.665 Sum_probs=54.2
Q ss_pred ceeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 384 TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 384 ~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
...+++|+.||.-..++||.|++.|+|++++..|+..|.|+ .+|-+||||+-||+.+..
T Consensus 547 ~~krakal~df~r~dddelgfrkndiitiisekdehcwvge-lnglrgwfpakfvellde 605 (848)
T KOG2222|consen 547 GAKRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGE-LNGLRGWFPAKFVELLDE 605 (848)
T ss_pred hhHHHHHHhhhhhccccccccccccEEEEeecCCcceeeec-cccccccchHHHHHHHHh
Confidence 35578999999999999999999999999999999999997 899999999999987654
No 79
>KOG1856|consensus
Probab=97.37 E-value=0.0011 Score=73.92 Aligned_cols=82 Identities=20% Similarity=0.302 Sum_probs=61.8
Q ss_pred CCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEE-CCeEEEEEEEEecCCC----cceEEEeCCceecCh
Q psy10852 11 NSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKE-NNKVSHYIINKITNTE----QQTCYKIGDKTFSDL 85 (563)
Q Consensus 11 ~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~-~~~v~h~~I~~~~~~~----~~~~~~~~~~~F~sl 85 (563)
.|.|| +++-++|+.+|.... .|.++||.|+......+++.+. ++-..|+.|+...... |. .+.+++..|..|
T Consensus 1108 HP~F~-n~n~eQAe~yL~~~d-~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~-~l~i~~e~feDL 1184 (1299)
T KOG1856|consen 1108 HPLFK-NLNAEQAEAYLSDMD-QGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGK-TLWIGGEEFEDL 1184 (1299)
T ss_pred Ccccc-CCCHHHHHHHHHhcc-cccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccc-eEEECCcccccH
Confidence 37777 799999999998854 5999999998866667777665 5667788887643211 11 244567899999
Q ss_pred HhhHHhhhcc
Q psy10852 86 PSLLAFYKVH 95 (563)
Q Consensus 86 ~~Li~~y~~~ 95 (563)
.|+|.-|...
T Consensus 1185 DEiI~r~vqp 1194 (1299)
T KOG1856|consen 1185 DEIIARYVQP 1194 (1299)
T ss_pred HHHHHHHHHH
Confidence 9999999765
No 80
>KOG4566|consensus
Probab=97.14 E-value=0.00073 Score=64.71 Aligned_cols=89 Identities=25% Similarity=0.393 Sum_probs=71.8
Q ss_pred CCCCCCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeC---
Q psy10852 2 TGTFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG--- 78 (563)
Q Consensus 2 ~~~~~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~--- 78 (563)
+.++.-++...||+|.+++++|+..|..++. |.||||+|+..+-.+.|++.....-+..+|..... .|..+
T Consensus 43 a~s~~~~~~~g~~w~~~~~~~~~~~l~~~p~-~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~-----sfr~ds~~ 116 (258)
T KOG4566|consen 43 AKSLSLLDSSGHYWGLETANEAELCLGQEPR-GTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDS-----SFRLDSSH 116 (258)
T ss_pred hheeeccccCCcccccccchhHHHhhcCCCc-cceeeecCcCccccceeEeeeccCCCCcccccccc-----ceeccccc
Confidence 4567778888999999999999999988765 99999999987777999999877777777776542 25552
Q ss_pred ---C--ceecChHhhHHhhhccc
Q psy10852 79 ---D--KTFSDLPSLLAFYKVHY 96 (563)
Q Consensus 79 ---~--~~F~sl~~Li~~y~~~~ 96 (563)
. ..|+.+..+|+||+...
T Consensus 117 ~~~~pl~~~e~~~~~~~~y~~~~ 139 (258)
T KOG4566|consen 117 RHTPPLISFEDVEVLIHHYRQSR 139 (258)
T ss_pred ccCCCcccChhHHHHHHhhhhhh
Confidence 1 48999999999996553
No 81
>KOG4773|consensus
Probab=97.12 E-value=4.3e-05 Score=74.21 Aligned_cols=56 Identities=27% Similarity=0.582 Sum_probs=52.3
Q ss_pred eEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 387 KVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 387 ~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
.+.|+++|.+....||.|.+||++.++.+++.+||.|+ ..|..||+|.+|++++..
T Consensus 177 ~~~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk-~R~~~g~yp~sF~~~ld~ 232 (386)
T KOG4773|consen 177 RAEASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGK-VRGLTGYYPDSFVKQLDD 232 (386)
T ss_pred HHHhhccCCCCccceeeeehhhHHHHHhhcccceeeee-eccccccccHHhhhhhcc
Confidence 57889999999999999999999999999999999998 789999999999998854
No 82
>KOG3557|consensus
Probab=96.83 E-value=0.00055 Score=71.88 Aligned_cols=59 Identities=25% Similarity=0.569 Sum_probs=53.1
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccCC
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~~ 444 (563)
..++.++|||.+.+..||++.+||++.|+.. ..+||.+++..|+.|++|.|.+.++...
T Consensus 500 ~k~~~~~Ydf~arNs~ELsV~k~E~LEvl~d-~R~WW~~kn~~G~~GyvP~nIL~~~~~~ 558 (721)
T KOG3557|consen 500 KKWVLVLYDFQARNSSELSVKKGEVLEVLDD-GRKWWKVKNGHGRAGYVPSNILAPLQPE 558 (721)
T ss_pred ceeeeeehhhhcccchhhhhhhhhhhhhhhc-cccceeccCccCCCCCcchhhhccCCCc
Confidence 4588999999999999999999999999954 4689999999999999999999888765
No 83
>KOG1451|consensus
Probab=96.79 E-value=0.001 Score=69.07 Aligned_cols=55 Identities=29% Similarity=0.321 Sum_probs=45.0
Q ss_pred cceEEeecCCCCCCCCCCeeccCCCEEEEEEeC-CCCEEEEEeCCeeeeecCCceEEc
Q psy10852 481 AFARVKQVRVPNAYDKTALKLEIGDIIKVTKTN-INGQWEGELNGKTGHFPFTHVEFI 537 (563)
Q Consensus 481 ~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~-~~~w~~g~~~g~~G~~P~~~v~~~ 537 (563)
..+++++.-+ +....+|+|.+|.+++-.... .+||..|+++|++|++|.|||+.+
T Consensus 757 rk~k~lyAc~--a~h~selsf~~gt~f~nv~~S~e~Gwl~GtLnGktglip~nyve~l 812 (812)
T KOG1451|consen 757 RRVKTLYACT--ADHHSELSFEPGTIFTNVYESNEDGWLVGTLNGKTGLIPSNYVEPL 812 (812)
T ss_pred ccccceeccC--CCCcccccccCcceeeeecccCCCCceeeecCCCcccCcccccCcC
Confidence 3455666655 555779999999999887744 499999999999999999999864
No 84
>KOG3775|consensus
Probab=96.79 E-value=0.00058 Score=66.97 Aligned_cols=57 Identities=25% Similarity=0.530 Sum_probs=51.6
Q ss_pred EEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-CCcEEEEcCCCeEeccCC
Q psy10852 388 VIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 388 ~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~g~~G~~P~~~v~~~~~~ 444 (563)
-+|++.|.+..++||.++.||-|.|-...++-|++|.|. +|++|+||+.|+-.+...
T Consensus 265 HR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ 322 (482)
T KOG3775|consen 265 HRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGP 322 (482)
T ss_pred hhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCc
Confidence 478899999999999999999999999989999999875 799999999999877654
No 85
>KOG0609|consensus
Probab=96.71 E-value=0.00054 Score=70.96 Aligned_cols=58 Identities=38% Similarity=0.762 Sum_probs=48.8
Q ss_pred eeeEEEeecccCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEec----CCcEEEEcCCCeEecc
Q psy10852 385 IEKVIAKYDFDGNDPD-------DLPFKKNDILIVVSKDEEHWWTAQNI----SGEVGSIPVPYVQKYS 442 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~-------el~~~~g~~v~v~~~~~~~W~~~~~~----~g~~G~~P~~~v~~~~ 442 (563)
...++|+|||++..++ -|+|++||++.|++++|..||+++.. ++..|++|+..++.-.
T Consensus 214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qerr 282 (542)
T KOG0609|consen 214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQERR 282 (542)
T ss_pred eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHHHH
Confidence 3678999999998766 68999999999999999999999744 3789999998776443
No 86
>KOG2528|consensus
Probab=96.71 E-value=0.00067 Score=68.27 Aligned_cols=56 Identities=32% Similarity=0.565 Sum_probs=51.6
Q ss_pred eeeecccCCCCCCCCCcCCCCCEEEEEEec-CCCeeEEeeCCCeeeEEecCceeecc
Q psy10852 112 KVIAKYDFDGNDPDDLPFKKNDILIVVSKD-EEHWWTAQNISGEVGSIPVPYVQKYS 167 (563)
Q Consensus 112 ~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~-~~~ww~g~~~~g~~G~fP~~yv~~~~ 167 (563)
..+++|||...+..+|+...|+++.+.... .++||.|.|.+|.+|+||+.||+...
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~ 60 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR 60 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeec
Confidence 468999999999999999999999998765 58999999999999999999999876
No 87
>KOG3775|consensus
Probab=96.61 E-value=0.0011 Score=65.10 Aligned_cols=59 Identities=24% Similarity=0.493 Sum_probs=53.2
Q ss_pred eeeeecccCCCCCCCCCcCCCCCEEEEEEecCCCeeEEee-CCCeeeEEecCceeecccc
Q psy10852 111 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQN-ISGEVGSIPVPYVQKYSEG 169 (563)
Q Consensus 111 ~~~~a~~d~~~~~~~eLs~~~Gd~i~vl~~~~~~ww~g~~-~~g~~G~fP~~yv~~~~~~ 169 (563)
..-++++.|.++.++||-+..||-|.|-...++.|..|.| .+|++|+||+.|+.+++..
T Consensus 263 ~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ 322 (482)
T KOG3775|consen 263 QTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGP 322 (482)
T ss_pred hhhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCc
Confidence 3357889999999999999999999999999999999999 5899999999999988753
No 88
>KOG4429|consensus
Probab=96.60 E-value=0.00066 Score=64.31 Aligned_cols=54 Identities=24% Similarity=0.174 Sum_probs=48.4
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEc
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFI 537 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~ 537 (563)
.|.+.|.|. +...+||....||++.+.++...|||.|++.|..|-||+.||+..
T Consensus 365 lcdafYSfq--arqddel~~e~gditif~Ekkeeg~~f~rl~gd~~hf~Aa~iEea 418 (421)
T KOG4429|consen 365 LCDAFYSFQ--ARQDDELGGEIGDITIFDEKKEEGPTFCRLLGDFEHFHAAEIEEA 418 (421)
T ss_pred Hhhhhhccc--cccccccCCcccceeeecCcccCCCceeeeccccCCCcHHHHHHh
Confidence 467777766 777999999999999999999999999999999999999999764
No 89
>KOG3771|consensus
Probab=96.59 E-value=0.0017 Score=66.31 Aligned_cols=52 Identities=25% Similarity=0.138 Sum_probs=42.2
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCC-CCEEEEEeCCeeeeecCCceE
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI-NGQWEGELNGKTGHFPFTHVE 535 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~~g~~~g~~G~~P~~~v~ 535 (563)
.++++++|. +.+.++|+|+.||+|.|+...+ +.||.|++.|..+-+|..|+.
T Consensus 402 ~v~a~~dy~--a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~~~~~~ 454 (460)
T KOG3771|consen 402 KVKALHDYA--AQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDWNGLFP 454 (460)
T ss_pred ceecccccc--ccccccccccCCCEEEEecCCCccchhhHHHhhhccccccccee
Confidence 455666666 8789999999999999999655 899999999877777766664
No 90
>KOG3725|consensus
Probab=96.55 E-value=0.00054 Score=63.70 Aligned_cols=56 Identities=23% Similarity=0.501 Sum_probs=50.0
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEec--CCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKD--EEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~--~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
...++++|||++..+.||++-+.++|+|.+-. |.+|..|+ .+++.|-+|.+|++.+
T Consensus 317 trkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgE-rGnkkGKvPvtYlELL 374 (375)
T KOG3725|consen 317 TRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGE-RGNKKGKVPVTYLELL 374 (375)
T ss_pred ccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhh-hcCCCCCcchhHHHhc
Confidence 45799999999999999999999999998764 67899997 7999999999998754
No 91
>KOG1451|consensus
Probab=96.55 E-value=0.0024 Score=66.34 Aligned_cols=59 Identities=24% Similarity=0.487 Sum_probs=51.1
Q ss_pred ccceeeEEEeecccCCCCCCCCCCCCCEEEEEE-ecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 382 TKTIEKVIAKYDFDGNDPDDLPFKKNDILIVVS-KDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 382 ~~~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~-~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
+....++.++|.-.+....+++|..|.++.-+. ...+||..|+ ++|+.|++|.|||+++
T Consensus 753 ~~~~rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~Gt-LnGktglip~nyve~l 812 (812)
T KOG1451|consen 753 KYLSRRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGT-LNGKTGLIPSNYVEPL 812 (812)
T ss_pred ccccccccceeccCCCCcccccccCcceeeeecccCCCCceeee-cCCCcccCcccccCcC
Confidence 334567899999999999999999999998776 4567999998 8999999999999863
No 92
>KOG4575|consensus
Probab=96.54 E-value=0.0035 Score=65.61 Aligned_cols=61 Identities=23% Similarity=0.325 Sum_probs=46.5
Q ss_pred ccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeC--CeeeeecCCceEEcCCC
Q psy10852 478 KLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELN--GKTGHFPFTHVEFIPTN 540 (563)
Q Consensus 478 ~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~--g~~G~~P~~~v~~~~~~ 540 (563)
+.++.++|++... .+.+++|.|-+||+|.++.-.++.||-+.+. ...|+||+|||..++.-
T Consensus 6 q~p~~vrA~y~w~--ge~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcLd~r 68 (874)
T KOG4575|consen 6 QLPCMVRALYAWP--GEREGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCLDKR 68 (874)
T ss_pred CCCceEEeeccCC--CCcccccceecccceeEEeeccceeeeeeeecccccccCcccceeecccc
Confidence 4466778888777 5558899999999999999666555555544 46799999999777543
No 93
>KOG3751|consensus
Probab=96.52 E-value=0.0021 Score=66.10 Aligned_cols=89 Identities=30% Similarity=0.556 Sum_probs=72.7
Q ss_pred CCCCCCccccccCHHHHHHHHhc-CCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeC--CcccC
Q psy10852 282 PHDRNSWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG--DKTFS 358 (563)
Q Consensus 282 ~~~~~~w~~g~~sr~~A~~~l~~-~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~--~~~f~ 358 (563)
.|....|+|+.++|.++..++.+ +-.+|.|++|+|.+.|..|++++...++++|+.|.-+... +..-+... ...|.
T Consensus 515 ~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~-~~~~~t~~~g~t~~s 593 (622)
T KOG3751|consen 515 IHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDD-GCTFFTLDDGPTKFS 593 (622)
T ss_pred hcccccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCC-CceeeccCCCCcccc
Confidence 34567999999999999998877 4678999999999999999999999999999999986543 32213333 37899
Q ss_pred ChhhHHhhhhccc
Q psy10852 359 DLPSLLAFYKVHY 371 (563)
Q Consensus 359 sl~~lv~~y~~~~ 371 (563)
++-.|+++|+.+.
T Consensus 594 d~~ql~~~~ql~k 606 (622)
T KOG3751|consen 594 DLIQLVEFYQLNK 606 (622)
T ss_pred ccccccchhhcCC
Confidence 9999999998663
No 94
>KOG4575|consensus
Probab=96.47 E-value=0.0033 Score=65.79 Aligned_cols=58 Identities=24% Similarity=0.464 Sum_probs=47.5
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-CCcEEEEcCCCeEecc
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKYS 442 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~g~~G~~P~~~v~~~~ 442 (563)
.+.++|+|.+.++.+++|.|-+||+|.++...+.-||-+.+. ....|+||.|||..+.
T Consensus 8 p~~vrA~y~w~ge~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcLd 66 (874)
T KOG4575|consen 8 PCMVRALYAWPGEREGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCLD 66 (874)
T ss_pred CceEEeeccCCCCcccccceecccceeEEeeccceeeeeeeecccccccCcccceeecc
Confidence 357899999999999999999999999998766555555544 4678999999996544
No 95
>KOG4429|consensus
Probab=96.32 E-value=0.0011 Score=62.91 Aligned_cols=55 Identities=22% Similarity=0.195 Sum_probs=50.7
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
..|.++|.|.+..++||....||++.+-++..+|||.|+ ..|..|-||+.||+..
T Consensus 364 ~lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~r-l~gd~~hf~Aa~iEea 418 (421)
T KOG4429|consen 364 ILCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCR-LLGDFEHFHAAEIEEA 418 (421)
T ss_pred HHhhhhhccccccccccCCcccceeeecCcccCCCceee-eccccCCCcHHHHHHh
Confidence 468899999999999999999999999999999999998 7999999999998754
No 96
>KOG0609|consensus
Probab=96.29 E-value=0.0015 Score=67.68 Aligned_cols=57 Identities=39% Similarity=0.777 Sum_probs=47.4
Q ss_pred ceeeeecccCCCCCCC-------CCcCCCCCEEEEEEecCCCeeEEeeCC----CeeeEEecCceeec
Q psy10852 110 IEKVIAKYDFDGNDPD-------DLPFKKNDILIVVSKDEEHWWTAQNIS----GEVGSIPVPYVQKY 166 (563)
Q Consensus 110 ~~~~~a~~d~~~~~~~-------eLs~~~Gd~i~vl~~~~~~ww~g~~~~----g~~G~fP~~yv~~~ 166 (563)
...++|+|||++..++ -|+|++|||+.|+.++|.+||.++... +..|++|+..+++-
T Consensus 214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qer 281 (542)
T KOG0609|consen 214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQER 281 (542)
T ss_pred eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHHH
Confidence 4678999999987754 678999999999999999999998643 45799999877653
No 97
>KOG3557|consensus
Probab=96.05 E-value=0.0026 Score=66.95 Aligned_cols=60 Identities=17% Similarity=0.264 Sum_probs=50.1
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeC-CeeeeecCCceEEcCCCCCCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELN-GKTGHFPFTHVEFIPTNETSV 544 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~-g~~G~~P~~~v~~~~~~~~~~ 544 (563)
+++++|||. +++..||++.+||++.|+. ..-+||+++.. |+.|++|.+.|..+.+.....
T Consensus 502 ~~~~~Ydf~--arNs~ELsV~k~E~LEvl~-d~R~WW~~kn~~G~~GyvP~nIL~~~~~~~~~~ 562 (721)
T KOG3557|consen 502 WVLVLYDFQ--ARNSSELSVKKGEVLEVLD-DGRKWWKVKNGHGRAGYVPSNILAPLQPEHTGE 562 (721)
T ss_pred eeeeehhhh--cccchhhhhhhhhhhhhhh-ccccceeccCccCCCCCcchhhhccCCCccccc
Confidence 566666666 8889999999999999988 45689998875 999999999999998776544
No 98
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=95.89 E-value=0.014 Score=54.90 Aligned_cols=73 Identities=21% Similarity=0.351 Sum_probs=53.9
Q ss_pred CCHHHHHHHHcCC----CCCCeEEEEecCCCCcceEEEEEECCeEEEEE--EEEecCCCcceEEEeCCceecChHhhHHh
Q psy10852 18 MTRQEAQAILLSE----KDNGAFLVRDSNTILGNYVLCVKENNKVSHYI--INKITNTEQQTCYKIGDKTFSDLPSLLAF 91 (563)
Q Consensus 18 i~r~~ae~~L~~~----~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~--I~~~~~~~~~~~~~~~~~~F~sl~~Li~~ 91 (563)
=+++++|++|... +.--.|.+-.+...||.|.|++..+...+|.- |.-.+.| |.+.+..|++|.+|+++
T Consensus 141 g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~~~~~~~~~v~V~p~G-----f~~r~~~f~~~~~L~~~ 215 (220)
T PF14633_consen 141 GTKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNKNPRHEYWPVKVTPDG-----FRFRKQVFPSLDRLINW 215 (220)
T ss_dssp S-CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESSTTS-EEEEEEEE-SSS-----EEETTEEESSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCCCCceEEeeEEEecCc-----EEEecccCCCHHHHHHH
Confidence 4577788888772 33346777778788999999998765544444 7777777 99999999999999999
Q ss_pred hhcc
Q psy10852 92 YKVH 95 (563)
Q Consensus 92 y~~~ 95 (563)
|+.+
T Consensus 216 FK~~ 219 (220)
T PF14633_consen 216 FKKH 219 (220)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 9865
No 99
>KOG3771|consensus
Probab=95.77 E-value=0.005 Score=62.99 Aligned_cols=55 Identities=25% Similarity=0.298 Sum_probs=43.5
Q ss_pred ceeeEEEeecccCCCCCCCCCCCCCEEEEEEecC-CCcEEEEecCCcEEEEcCCCeE
Q psy10852 384 TIEKVIAKYDFDGNDPDDLPFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPVPYVQ 439 (563)
Q Consensus 384 ~~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~-~~W~~~~~~~g~~G~~P~~~v~ 439 (563)
....+.++|+|.++..++|+|+.||+|.|+..++ +.||.|. ..|..+-+|.+||.
T Consensus 399 ~~~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~-~mg~ke~~~~~~~~ 454 (460)
T KOG3771|consen 399 FLYKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGW-LMGVKESDWNGLFP 454 (460)
T ss_pred CccceeccccccccccccccccCCCEEEEecCCCccchhhHH-Hhhhccccccccee
Confidence 3557899999999999999999999999999654 4788886 55666666655553
No 100
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=95.28 E-value=0.024 Score=44.12 Aligned_cols=45 Identities=22% Similarity=0.317 Sum_probs=32.5
Q ss_pred CCCCCcCCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCceeecc
Q psy10852 123 DPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYS 167 (563)
Q Consensus 123 ~~~eLs~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~~~~ 167 (563)
..-+|.+++|+++.|++..+.+-|.+||..|+-|++|.+++-..+
T Consensus 29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d 73 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLD 73 (89)
T ss_dssp -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS----
T ss_pred CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCC
Confidence 457999999999999999999999999999999999999986554
No 101
>KOG0199|consensus
Probab=94.96 E-value=0.02 Score=61.64 Aligned_cols=52 Identities=27% Similarity=0.488 Sum_probs=42.6
Q ss_pred EEEeecccCCCCCCCCCCCCCEEEEEEecCC-CcEEEEe-cCCcEEEEcCCCeE
Q psy10852 388 VIAKYDFDGNDPDDLPFKKNDILIVVSKDEE-HWWTAQN-ISGEVGSIPVPYVQ 439 (563)
Q Consensus 388 ~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~-~W~~~~~-~~g~~G~~P~~~v~ 439 (563)
++|...|++..++.|-|++||.|+|++.... -||+|.+ .+++.|.||.+-|-
T Consensus 377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 377 AVARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred ceeeeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 3445556677889999999999999998865 5999965 48899999999876
No 102
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=94.95 E-value=0.054 Score=39.00 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=30.9
Q ss_pred eeccCCCEEEEEEeCCCC-EEEE-EeCCeeeeecCCceE
Q psy10852 499 LKLEIGDIIKVTKTNING-QWEG-ELNGKTGHFPFTHVE 535 (563)
Q Consensus 499 L~~~~gd~i~v~~~~~~~-w~~g-~~~g~~G~~P~~~v~ 535 (563)
-.+..|+.|.|+....++ |++. ..+|.+||+++.||+
T Consensus 17 ~~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 17 GQLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS 55 (55)
T ss_dssp EEEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred EEEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence 356889999999977755 9999 678999999999985
No 103
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=94.92 E-value=0.041 Score=39.66 Aligned_cols=36 Identities=17% Similarity=0.544 Sum_probs=30.5
Q ss_pred CCCCCEEEEEEecCCC-cEEEEecCCcEEEEcCCCeE
Q psy10852 404 FKKNDILIVVSKDEEH-WWTAQNISGEVGSIPVPYVQ 439 (563)
Q Consensus 404 ~~~g~~v~v~~~~~~~-W~~~~~~~g~~G~~P~~~v~ 439 (563)
+..|+.|.|+....++ |++.+..+|..||+++.||+
T Consensus 19 l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 19 LPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS 55 (55)
T ss_dssp EETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred EeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence 5779999999988765 99996679999999999984
No 104
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=94.56 E-value=0.043 Score=42.77 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=32.0
Q ss_pred CCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 399 PDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 399 ~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
..+|.+++|+++.|+...+++=|.|++..|+-|+||.+++-+...
T Consensus 30 ~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d~ 74 (89)
T PF14603_consen 30 GKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLDG 74 (89)
T ss_dssp TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS-----
T ss_pred cccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCCC
Confidence 468999999999999999999999999999999999999865543
No 105
>KOG3565|consensus
Probab=94.46 E-value=0.022 Score=62.32 Aligned_cols=56 Identities=18% Similarity=0.328 Sum_probs=47.3
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCC-CCEEEEE--eCCeeeeecCCceEEcCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI-NGQWEGE--LNGKTGHFPFTHVEFIPT 539 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~~g~--~~g~~G~~P~~~v~~~~~ 539 (563)
.+.+++.|. +.+++++++.+|+++.+++... +||-+++ .+|..|.||.+||+.+..
T Consensus 580 ~~~a~~~~~--~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~~ 638 (640)
T KOG3565|consen 580 TSKALYAFE--GQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTET 638 (640)
T ss_pred ceecccCcC--CCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccccc
Confidence 455566666 6669999999999999999775 8999999 789999999999987754
No 106
>KOG1856|consensus
Probab=94.44 E-value=0.027 Score=63.38 Aligned_cols=83 Identities=24% Similarity=0.429 Sum_probs=67.9
Q ss_pred CccccCCCHHHHHHHHcC-CCCCCeEEEE---ecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecChHh
Q psy10852 12 SWYFGMMTRQEAQAILLS-EKDNGAFLVR---DSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPS 87 (563)
Q Consensus 12 ~w~~g~i~r~~ae~~L~~-~~~~G~FLvR---~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~sl~~ 87 (563)
.+|. .=++.+.|++|.. .+.++.+.+- .|...||.|+|+++.+.+++|--|.-.+.| |++.+..|.||.+
T Consensus 1206 kyf~-~Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v~p~g-----~~~rg~~f~tld~ 1279 (1299)
T KOG1856|consen 1206 KYFF-TGTKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKVVPEG-----FRFRGQNFGTLDE 1279 (1299)
T ss_pred hHhh-cCCHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEEcccc-----eEEecccchhHHH
Confidence 4554 2349999999986 4555777665 577789999999999999999999988887 9999999999999
Q ss_pred hHHhhhcccCCCc
Q psy10852 88 LLAFYKVHYLDTS 100 (563)
Q Consensus 88 Li~~y~~~~~~~~ 100 (563)
|..+|+++-...+
T Consensus 1280 L~~~FK~h~~~~~ 1292 (1299)
T KOG1856|consen 1280 LCRWFKRHYKDPT 1292 (1299)
T ss_pred HHHHHHHHhcCCC
Confidence 9999998855433
No 107
>KOG0199|consensus
Probab=94.43 E-value=0.11 Score=56.35 Aligned_cols=56 Identities=34% Similarity=0.414 Sum_probs=44.9
Q ss_pred cccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCC-CCEEEEE--eCCeeeeecCCceEEcC
Q psy10852 479 LPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNI-NGQWEGE--LNGKTGHFPFTHVEFIP 538 (563)
Q Consensus 479 ~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~-~~w~~g~--~~g~~G~~P~~~v~~~~ 538 (563)
.+..+++++++. .++.|.|++||.|+|++... +-||.|. .+++.|.||.+-|..-.
T Consensus 375 qp~~a~~~~d~~----ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~a~ 433 (1039)
T KOG0199|consen 375 QPAVARETYDSI----EPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTAAT 433 (1039)
T ss_pred CCceeeeecccc----CCCceeeccCCeEEEEecCCccceeeccccccceecccCcceeeecc
Confidence 455677777754 49999999999999999765 6789984 46899999999998443
No 108
>KOG3697|consensus
Probab=94.11 E-value=0.061 Score=51.36 Aligned_cols=91 Identities=18% Similarity=0.231 Sum_probs=64.0
Q ss_pred CCCCccccccCHHHHHHHHhcCCCCCcEEEEec-----------------------------------------------
Q psy10852 284 DRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDS----------------------------------------------- 316 (563)
Q Consensus 284 ~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S----------------------------------------------- 316 (563)
...+|++|.++++.++..|.- .+.|+++.+
T Consensus 199 ~k~pp~~g~l~~~~~q~~l~~---~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~ 275 (345)
T KOG3697|consen 199 SKMPPPGGFLDTRLKQRPLAP---DAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDE 275 (345)
T ss_pred ccCCCCCCccchhhhhccCCc---ccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhccc
Confidence 356899999999988877653 244444432
Q ss_pred CCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeCCcccCChhhHHhhhhcccCC------CCccccccc
Q psy10852 317 NTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLD------TSPLIKPAT 382 (563)
Q Consensus 317 ~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~~~~f~sl~~lv~~y~~~~~~------~~~l~~P~~ 382 (563)
...+|.|+|+-..++..||..+.--... ....++.|+|+..||+|+-.+.+. ..+|..|+.
T Consensus 276 ~~~~gqyvltgl~~~~~khlllvdpegv-----vrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~ 342 (345)
T KOG3697|consen 276 TTTPGQYVLTGLQSGQPKHLLLVDPEGV-----VRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVE 342 (345)
T ss_pred cCCCccEEEecccCCCcceEEEECCccc-----eecccchhhHHHHHHHHhhhccCceecCcchhhhhCccc
Confidence 3457889999999999999876532211 444579999999999999887653 245566653
No 109
>KOG4384|consensus
Probab=94.04 E-value=0.063 Score=53.04 Aligned_cols=65 Identities=37% Similarity=0.592 Sum_probs=58.9
Q ss_pred ccccceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCCCC
Q psy10852 478 KLPAFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNET 542 (563)
Q Consensus 478 ~~~~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~~~ 542 (563)
.....+++.-+++++.++.++|.++.||+|.++++..-|-|.|-++++.|-|+..||..+..++.
T Consensus 134 p~c~~~~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~~~kv~~f~~~~v~~~s~e~~ 198 (361)
T KOG4384|consen 134 PFCGRARVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGLLNNKVGSFKFIYVDVISEEEP 198 (361)
T ss_pred CccccccccccCCCCcccccchhhcccchhhccccCccccccccccCcccccccceecccccccc
Confidence 34456889999999999999999999999999999999999999999999999999999976654
No 110
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=93.53 E-value=0.13 Score=47.88 Aligned_cols=105 Identities=16% Similarity=0.167 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEEecCC-CcEEEEecCCcEEEEcCCCeEeccCCcccccccccCCCCCCCCCCCCCCCccccccccccccc
Q psy10852 403 PFKKNDILIVVSKDEE-HWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQQTTPVRKTHLEVKLPA 481 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~~-~W~~~~~~~g~~G~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (563)
++++|+.|.|+..... +|.+.+..+|+.||||..++.......... + ....
T Consensus 49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~s~~~~~--------------------p--------~~~~ 100 (205)
T COG3103 49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEPSSNERV--------------------P--------DLEL 100 (205)
T ss_pred EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhccccccceec--------------------C--------chhh
Confidence 5789999999999876 899998789999999998875332210000 0 0000
Q ss_pred ceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCC
Q psy10852 482 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPT 539 (563)
Q Consensus 482 ~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~ 539 (563)
.+|.+..-. ..-.=.++.|..+.+..+...+|.....+|+.||+-..|+..-..
T Consensus 101 nVr~~t~t~----~~v~g~~~~~t~~~~~sk~~~~w~~~~~~~k~~~vs~q~~~~~~~ 154 (205)
T COG3103 101 NVRELTKTL----SNVDGTWKQGTAVMQISKTQNNWYIITLKGKNGYVSGQLVTAQSK 154 (205)
T ss_pred hhhhcccch----hhhhhhhhcCcEEEEEeeccccchhhhhhcccchhhhhheecccc
Confidence 111111000 000124567889999998889999999999999999888865433
No 111
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=93.28 E-value=0.15 Score=37.83 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=30.0
Q ss_pred CCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCe
Q psy10852 403 PFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYV 438 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v 438 (563)
.+..|+.|.|+...+++|++.+..+|+.||++..++
T Consensus 26 ~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~ 61 (63)
T smart00287 26 TLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV 61 (63)
T ss_pred EecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence 367899999999876699999865699999987765
No 112
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=93.25 E-value=0.21 Score=36.96 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=31.3
Q ss_pred CeeccCCCEEEEEEeCCCCEEEEEeC-CeeeeecCCceE
Q psy10852 498 ALKLEIGDIIKVTKTNINGQWEGELN-GKTGHFPFTHVE 535 (563)
Q Consensus 498 eL~~~~gd~i~v~~~~~~~w~~g~~~-g~~G~~P~~~v~ 535 (563)
--.+..|+.+.|+....++|+..+.. |.+||++..++.
T Consensus 24 ~~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~~ 62 (63)
T smart00287 24 IGTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVVN 62 (63)
T ss_pred eEEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeeec
Confidence 33578999999999765599999986 999999887764
No 113
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=93.00 E-value=0.19 Score=46.76 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=70.9
Q ss_pred cCCCCCEEEEEEecCC-CeeEEeeCCCeeeEEecCceeecccccccccccccccCCCCCCCCCCCCCccccccccccCc-
Q psy10852 128 PFKKNDILIVVSKDEE-HWWTAQNISGEVGSIPVPYVQKYSEGMSILSLRNLHLDSSSHHVPQQQTTPVRKTHLEVKLP- 205 (563)
Q Consensus 128 s~~~Gd~i~vl~~~~~-~ww~g~~~~g~~G~fP~~yv~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p- 205 (563)
++++|+.+.|+.+... +|.+.+-..|++|||+..++......-...|...+.+. .++
T Consensus 49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~s~~~~~p~~~~nVr---------------------~~t~ 107 (205)
T COG3103 49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEPSSNERVPDLELNVR---------------------ELTK 107 (205)
T ss_pred EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhccccccceecCchhhhhh---------------------hccc
Confidence 3789999999998765 89999989999999999988765432111111111110 111
Q ss_pred cceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecC
Q psy10852 206 AFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIP 263 (563)
Q Consensus 206 ~~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~ 263 (563)
...+++ =.++.|..+.+..+..++|....++++.|++=..|+..-.
T Consensus 108 t~~~v~------------g~~~~~t~~~~~sk~~~~w~~~~~~~k~~~vs~q~~~~~~ 153 (205)
T COG3103 108 TLSNVD------------GTWKQGTAVMQISKTQNNWYIITLKGKNGYVSGQLVTAQS 153 (205)
T ss_pred chhhhh------------hhhhcCcEEEEEeeccccchhhhhhcccchhhhhheeccc
Confidence 011111 1356788889999888999999999999999987775443
No 114
>KOG3508|consensus
Probab=91.33 E-value=0.17 Score=56.65 Aligned_cols=120 Identities=19% Similarity=0.235 Sum_probs=73.3
Q ss_pred CCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEE-CCeEEEEEEEEecCCCcceEEEeCCceecChHhhH
Q psy10852 11 NSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKE-NNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLL 89 (563)
Q Consensus 11 ~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~-~~~v~h~~I~~~~~~~~~~~~~~~~~~F~sl~~Li 89 (563)
..||||++.|.-++.+++.....|.|+||++...++.+.+++-- -+.+.|+++.-.... ... |.-+.-.|..++-|
T Consensus 81 ~~~~~~~lrr~i~e~r~r~~e~s~~~wi~e~~~lp~~~~l~~~~~~d~~l~~r~~s~~~~-s~v-l~gE~~~f~~lPpl- 157 (932)
T KOG3508|consen 81 RKWYMENLRRTIAESRLRRAENSGSYWIREAKRLPGKGKLSCLLQLDGTLYARTISKCGT-SNV-LWGENFLFPVLPPL- 157 (932)
T ss_pred hhhhhcchhhhcccchhhccCCceeEEeeccCcCCCcceeehhhccchhHHhhhhhhccc-chh-ccccccccccCCcc-
Confidence 36999999999999998875555999999999999999988743 233888877643321 000 11111223322211
Q ss_pred HhhhcccCCCccccccccccceeeeecccCCC-CCCCCCcCCCCCEEEEEEecCCCeeEEe
Q psy10852 90 AFYKVHYLDTSPLIKPATKTIEKVIAKYDFDG-NDPDDLPFKKNDILIVVSKDEEHWWTAQ 149 (563)
Q Consensus 90 ~~y~~~~~~~~~L~~p~~~~~~~~~a~~d~~~-~~~~eLs~~~Gd~i~vl~~~~~~ww~g~ 149 (563)
.... ...+++...+.. .+.+++.+.+|+...+-....+.|+...
T Consensus 158 ---------~~~~-------~~~~~~i~~~~k~~~n~~l~~~~~~~f~~~~~~~d~w~~v~ 202 (932)
T KOG3508|consen 158 ---------PVVD-------VLRVRAILPKKKKPTNDEIGFVKGDEFPVHRDLEDGWYWVT 202 (932)
T ss_pred ---------chhh-------hhhhhhhhhhhccCcccccccccchhheecccccceeEEee
Confidence 0000 112333333332 3456888888888777766777786654
No 115
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=91.20 E-value=0.59 Score=33.58 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=30.3
Q ss_pred CeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCce
Q psy10852 498 ALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHV 534 (563)
Q Consensus 498 eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v 534 (563)
-..+.+|.++.|++ ..++|...+.+|..||++...|
T Consensus 18 v~~l~~g~~v~v~~-~~~~W~~V~~~g~~GWv~~~~l 53 (55)
T PF06347_consen 18 VARLEPGVPVRVIE-CRGGWCKVRADGRTGWVHKSLL 53 (55)
T ss_pred EEEECCCCEEEEEE-ccCCeEEEEECCeEEeEEeeec
Confidence 45678899999996 5679999999999999998765
No 116
>KOG3565|consensus
Probab=91.12 E-value=0.057 Score=59.13 Aligned_cols=58 Identities=26% Similarity=0.551 Sum_probs=51.4
Q ss_pred eeeEEEeecccCCCCCCCCCCCCCEEEEEEec-CCCcEEEE-ecCCcEEEEcCCCeEecc
Q psy10852 385 IEKVIAKYDFDGNDPDDLPFKKNDILIVVSKD-EEHWWTAQ-NISGEVGSIPVPYVQKYS 442 (563)
Q Consensus 385 ~~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~-~~~W~~~~-~~~g~~G~~P~~~v~~~~ 442 (563)
...+.|+|.|.+..++++++.+|+++.|++.. .+||=+++ ..++..|.||++|++.+.
T Consensus 578 ~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~ 637 (640)
T KOG3565|consen 578 IRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE 637 (640)
T ss_pred ccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence 56899999999999999999999999999877 56898887 468999999999998654
No 117
>PRK10884 SH3 domain-containing protein; Provisional
Probab=90.86 E-value=0.25 Score=46.29 Aligned_cols=41 Identities=7% Similarity=0.224 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEEecC-CCcEEEEecCCcEEEEcCCCeEeccC
Q psy10852 403 PFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPVPYVQKYSE 443 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~-~~W~~~~~~~g~~G~~P~~~v~~~~~ 443 (563)
++..|+.|+|++..+ .+|.+++..+|+.||++..|+.....
T Consensus 49 ~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p~ 90 (206)
T PRK10884 49 TLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTPS 90 (206)
T ss_pred EEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCcc
Confidence 467899999999876 58999987799999999999875543
No 118
>PRK10884 SH3 domain-containing protein; Provisional
Probab=89.88 E-value=0.33 Score=45.47 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=33.8
Q ss_pred eccCCCEEEEEEeCC-CCEEEEEe-CCeeeeecCCceEEcCC
Q psy10852 500 KLEIGDIIKVTKTNI-NGQWEGEL-NGKTGHFPFTHVEFIPT 539 (563)
Q Consensus 500 ~~~~gd~i~v~~~~~-~~w~~g~~-~g~~G~~P~~~v~~~~~ 539 (563)
++..|+.|+|++..+ .||...+. +|++||++..||...+.
T Consensus 49 ~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p~ 90 (206)
T PRK10884 49 TLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTPS 90 (206)
T ss_pred EEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCcc
Confidence 678999999999776 68999985 68999999999976543
No 119
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=88.88 E-value=0.7 Score=33.19 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.7
Q ss_pred CCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCe
Q psy10852 402 LPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYV 438 (563)
Q Consensus 402 l~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v 438 (563)
..+.+|..+.|+. +.++|.+.+ .+|..||++.+.|
T Consensus 19 ~~l~~g~~v~v~~-~~~~W~~V~-~~g~~GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVIE-CRGGWCKVR-ADGRTGWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEEE-ccCCeEEEE-ECCeEEeEEeeec
Confidence 3467888999884 457999998 8999999998765
No 120
>KOG3812|consensus
Probab=86.97 E-value=0.25 Score=48.39 Aligned_cols=49 Identities=29% Similarity=0.662 Sum_probs=39.1
Q ss_pred EEEeecccCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEec--CCcEEEEcCC
Q psy10852 388 VIAKYDFDGNDPD-------DLPFKKNDILIVVSKDEEHWWTAQNI--SGEVGSIPVP 436 (563)
Q Consensus 388 ~~a~~~y~~~~~~-------el~~~~g~~v~v~~~~~~~W~~~~~~--~g~~G~~P~~ 436 (563)
+++.-+|.+.-++ .++|..-|.|.|.++.+++||.|+.. ++..||+|..
T Consensus 61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPsp 118 (475)
T KOG3812|consen 61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP 118 (475)
T ss_pred EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccch
Confidence 4455667665544 58999999999999999999999643 7899999973
No 121
>KOG3705|consensus
Probab=86.35 E-value=0.61 Score=46.88 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=46.5
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEec-CCcEEEEcCCCeEec
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNI-SGEVGSIPVPYVQKY 441 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~-~g~~G~~P~~~v~~~ 441 (563)
...+++++..++..+||.++.||+|-|-+.--+|.=+|++. .++.|+||+--|++.
T Consensus 510 Hn~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvrek 566 (580)
T KOG3705|consen 510 HNVIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVREK 566 (580)
T ss_pred cceEEEEecCCCcccccCcccCCeeeecccccccccccccccccccCCCccceeeee
Confidence 45789999999999999999999999987665666677654 689999999777654
No 122
>KOG0040|consensus
Probab=84.12 E-value=0.033 Score=64.04 Aligned_cols=58 Identities=14% Similarity=0.230 Sum_probs=51.6
Q ss_pred cceEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEeCCeeeeecCCceEEcCCC
Q psy10852 481 AFARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTN 540 (563)
Q Consensus 481 ~~~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~~g~~G~~P~~~v~~~~~~ 540 (563)
.++.++|+|. ..++.+.+.+.||+.+.+.-.+-.||..+++.+.|++|+.||+.+.++
T Consensus 969 ~~v~alyd~q--~kSprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~~ 1026 (2399)
T KOG0040|consen 969 ECVLALYDYQ--EKSPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDPG 1026 (2399)
T ss_pred HHHHHHHHHH--hcCHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhccC
Confidence 3455677776 777999999999999999988899999999999999999999999877
No 123
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=83.81 E-value=6.6 Score=29.93 Aligned_cols=43 Identities=26% Similarity=0.393 Sum_probs=34.7
Q ss_pred CccccCCCHHHHHHHHcC-CCCCCeEEEEecCCCCcceEEEEEE
Q psy10852 12 SWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKE 54 (563)
Q Consensus 12 ~w~~g~i~r~~ae~~L~~-~~~~G~FLvR~s~~~~~~~~lsv~~ 54 (563)
+=|...|+=+|+.+.|+. ....|+|+.|-|-++.|..++-+..
T Consensus 3 pgY~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~ 46 (86)
T PF02762_consen 3 PGYMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVT 46 (86)
T ss_dssp TTBETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEE
T ss_pred CceeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEc
Confidence 457778999999999988 3445999999999989999998765
No 124
>KOG0040|consensus
Probab=83.71 E-value=0.039 Score=63.46 Aligned_cols=58 Identities=29% Similarity=0.755 Sum_probs=53.0
Q ss_pred eeEEEeecccCCCCCCCCCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEeccCC
Q psy10852 386 EKVIAKYDFDGNDPDDLPFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 386 ~~~~a~~~y~~~~~~el~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~~~~ 444 (563)
..+.|+|+|....+.+.+.++||+++.+......||.++ ++.+.|++|+.||+.+...
T Consensus 969 ~~v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve-~~d~qg~vpa~yvk~~~~~ 1026 (2399)
T KOG0040|consen 969 ECVLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVE-VNDRQGFVPAAYVKRLDPG 1026 (2399)
T ss_pred HHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccch-hhhhcCcchHHHHHHhccC
Confidence 356789999999999999999999999998889999998 8899999999999988765
No 125
>KOG3705|consensus
Probab=77.61 E-value=2.2 Score=43.13 Aligned_cols=52 Identities=25% Similarity=0.403 Sum_probs=39.8
Q ss_pred eEEeecCCCCCCCCCCeeccCCCEEEEEEeCCCCEEEEEe--CCeeeeecCCceEE
Q psy10852 483 ARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGEL--NGKTGHFPFTHVEF 536 (563)
Q Consensus 483 ~~~~~~y~~~~~~~~eL~~~~gd~i~v~~~~~~~w~~g~~--~g~~G~~P~~~v~~ 536 (563)
.+|+.+..|+. .+||.+++||+|-|-...=+|.-.|.. .++.|+||+--|+.
T Consensus 512 ~ivi~aH~prt--~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre 565 (580)
T KOG3705|consen 512 VIVIEAHIPRT--NKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE 565 (580)
T ss_pred eEEEEecCCCc--ccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence 56888888554 889999999999997743355556644 47999999887764
No 126
>KOG3812|consensus
Probab=76.91 E-value=1.7 Score=42.86 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=31.8
Q ss_pred ceeeccCCEEEEeeecCCCceeeee---CCceeecccc
Q psy10852 223 ALKLEIGDIIKVTKTNINGQWEGEL---NGKTGHFPFT 257 (563)
Q Consensus 223 eLsf~~Gd~v~V~~~~~~~W~~g~~---~g~~G~~P~~ 257 (563)
.++|..-|.+.+.++-.++||-|++ +...|++|+.
T Consensus 81 aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPsp 118 (475)
T KOG3812|consen 81 AISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP 118 (475)
T ss_pred eeeeccccceeehhhcccchhHHHHhhcCCccccccch
Confidence 4999999999999999999999987 6799999964
No 127
>KOG4566|consensus
Probab=76.47 E-value=6.1 Score=38.28 Aligned_cols=81 Identities=27% Similarity=0.442 Sum_probs=59.3
Q ss_pred CCCCCccccccCHHHHHHHHhcCCCCCcEEEEecCCCCcceEEEEEeCCeeEEEEEeeecCCCcceeEEeC------C--
Q psy10852 283 HDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIG------D-- 354 (563)
Q Consensus 283 ~~~~~w~~g~~sr~~A~~~l~~~~~~G~FlvR~S~~~~g~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~i~------~-- 354 (563)
.....||.|.+...+|+..|... ..|.|++|+|...+--+.|++......+..+|...+.. |... .
T Consensus 49 ~~~~g~~w~~~~~~~~~~~l~~~-p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~s-----fr~ds~~~~~~pl 122 (258)
T KOG4566|consen 49 LDSSGHYWGLETANEAELCLGQE-PRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSS-----FRLDSSHRHTPPL 122 (258)
T ss_pred cccCCcccccccchhHHHhhcCC-CccceeeecCcCccccceeEeeeccCCCCccccccccc-----eecccccccCCCc
Confidence 34457889999999998777776 55999999999988888898887665555555553322 2221 1
Q ss_pred cccCChhhHHhhhhc
Q psy10852 355 KTFSDLPSLLAFYKV 369 (563)
Q Consensus 355 ~~f~sl~~lv~~y~~ 369 (563)
..|++...++.+|+.
T Consensus 123 ~~~e~~~~~~~~y~~ 137 (258)
T KOG4566|consen 123 ISFEDVEVLIHHYRQ 137 (258)
T ss_pred ccChhHHHHHHhhhh
Confidence 478899999999954
No 128
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=75.01 E-value=3.5 Score=31.46 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=20.5
Q ss_pred CeeccCCCEEEEEEeC------CCCEEEEEe
Q psy10852 498 ALKLEIGDIIKVTKTN------INGQWEGEL 522 (563)
Q Consensus 498 eL~~~~gd~i~v~~~~------~~~w~~g~~ 522 (563)
-|++++||.|.|-... +..||.|..
T Consensus 3 FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 3 FLSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred ccccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 4889999999997655 479999975
No 129
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=74.29 E-value=4.1 Score=43.07 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=32.1
Q ss_pred eccCCCEEEEEEeCCCCEEEEEeC-CeeeeecCCceEE
Q psy10852 500 KLEIGDIIKVTKTNINGQWEGELN-GKTGHFPFTHVEF 536 (563)
Q Consensus 500 ~~~~gd~i~v~~~~~~~w~~g~~~-g~~G~~P~~~v~~ 536 (563)
++..|+.|.|+...+.||+..+.+ |+.||+=..||..
T Consensus 104 sl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~ 141 (481)
T PRK13914 104 SIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 141 (481)
T ss_pred eecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccC
Confidence 578899999986556799999995 9999999999875
No 130
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=73.99 E-value=4.1 Score=43.01 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=33.0
Q ss_pred CCCCCCEEEEEEecCCCcEEEEecCCcEEEEcCCCeEec
Q psy10852 403 PFKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQKY 441 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~~~W~~~~~~~g~~G~~P~~~v~~~ 441 (563)
++..|+.|.|+...+.||++.+..+|+.||+-..||..-
T Consensus 104 sl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~ 142 (481)
T PRK13914 104 SIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDK 142 (481)
T ss_pred eecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCC
Confidence 578999999987566799999855799999999998743
No 131
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=68.40 E-value=6.8 Score=28.63 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=22.1
Q ss_pred eccCCCEEEEEEeCCCCEEEEEeCCe
Q psy10852 500 KLEIGDIIKVTKTNINGQWEGELNGK 525 (563)
Q Consensus 500 ~~~~gd~i~v~~~~~~~w~~g~~~g~ 525 (563)
.|++||.|.+....+++||.|.+...
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V~~~ 27 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVVTKV 27 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEEEEE
Confidence 57899999999988899999987543
No 132
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=65.59 E-value=7.1 Score=29.83 Aligned_cols=25 Identities=32% Similarity=0.674 Sum_probs=20.1
Q ss_pred CCCCCCCCEEEEEEec------CCCcEEEEe
Q psy10852 401 DLPFKKNDILIVVSKD------EEHWWTAQN 425 (563)
Q Consensus 401 el~~~~g~~v~v~~~~------~~~W~~~~~ 425 (563)
-|+++.||.|.|.... +..||.|..
T Consensus 3 FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 3 FLSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred ccccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 4789999999997754 468999963
No 133
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=61.71 E-value=10 Score=27.69 Aligned_cols=22 Identities=50% Similarity=0.930 Sum_probs=19.8
Q ss_pred CCCCCCEEEEEEecCCCcEEEE
Q psy10852 403 PFKKNDILIVVSKDEEHWWTAQ 424 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~~~W~~~~ 424 (563)
.|++|+.|.+....++.||.|.
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~ 23 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAV 23 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEE
Confidence 5899999999988888999996
No 134
>KOG1314|consensus
Probab=60.56 E-value=9.4 Score=38.13 Aligned_cols=57 Identities=28% Similarity=0.311 Sum_probs=37.7
Q ss_pred CCCCeeccCCCEEEEEEeCCCCEEEEEe-------CC----eeeeecCCc-eEEcCCCCCCCCCCCCCccc
Q psy10852 495 DKTALKLEIGDIIKVTKTNINGQWEGEL-------NG----KTGHFPFTH-VEFIPTNETSVETNGNGDIH 553 (563)
Q Consensus 495 ~~~eL~~~~gd~i~v~~~~~~~w~~g~~-------~g----~~G~~P~~~-v~~~~~~~~~~~~~~~~~~~ 553 (563)
++-.|++++||.|.+... -.+|.+|+. .+ -+||||.+. ++..+.. .++.-+.+|+-.
T Consensus 330 ddprisL~p~d~i~~tr~-~~~wlyg~~~l~e~~~E~~~rkiRgwfP~~~a~e~~e~~-~~~d~~~~gE~~ 398 (414)
T KOG1314|consen 330 DDPRISLPPGDGIKATRG-FNHWLYGEEILSEMFNESRERKIRGWFPRNCAVEKCEKD-YEPDETDWGESL 398 (414)
T ss_pred CCcccccCCCcceeeeee-eecccchhhhhhHHHhhcchhhhcccccccccccccccc-CCCccCCCCCCc
Confidence 345799999999999884 459999943 22 369999999 5555432 333334444433
No 135
>KOG4384|consensus
Probab=59.81 E-value=5.3 Score=39.89 Aligned_cols=60 Identities=40% Similarity=0.648 Sum_probs=53.9
Q ss_pred ceeeeeccccCCCCCCceeeccCCEEEEeeecCCCceeeeeCCceeeccccceeecCCCC
Q psy10852 207 FARVKQVRVPNAYDKTALKLEIGDIIKVTKTNINGQWEGELNGKTGHFPFTHVEFIPTNE 266 (563)
Q Consensus 207 ~~~~~~~~~~~a~~~~eLsf~~Gd~v~V~~~~~~~W~~g~~~g~~G~~P~~~ve~~~~~~ 266 (563)
.+++...+.+..+..++|.+.+|+++.++++..-+-|.|-++++.|.|+.-|+..+....
T Consensus 138 ~~~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~~~kv~~f~~~~v~~~s~e~ 197 (361)
T KOG4384|consen 138 RARVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGLLNNKVGSFKFIYVDVISEEE 197 (361)
T ss_pred cccccccCCCCcccccchhhcccchhhccccCccccccccccCcccccccceeccccccc
Confidence 466777888899999999999999999999999999999999999999999999887543
No 136
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=58.36 E-value=24 Score=25.30 Aligned_cols=34 Identities=12% Similarity=-0.099 Sum_probs=24.5
Q ss_pred CeeccCCCEEEEEEeC-CCCEEEEEeCCeeeeecC
Q psy10852 498 ALKLEIGDIIKVTKTN-INGQWEGELNGKTGHFPF 531 (563)
Q Consensus 498 eL~~~~gd~i~v~~~~-~~~w~~g~~~g~~G~~P~ 531 (563)
+-.+.+|+-|.|+... |..|..++...-.||+++
T Consensus 20 ~s~l~~gtPv~i~H~S~D~~W~fV~t~~~~GWV~s 54 (54)
T PF12913_consen 20 NSALHPGTPVYILHTSRDGAWAFVQTPFYSGWVKS 54 (54)
T ss_dssp EEEE-TT-EEEEEEE-TTSSEEEEE-SS-EEEEEG
T ss_pred hcccCCCCCEEEEEECCCCCEEEEecCCeeEeeeC
Confidence 5678899999998877 478889999999999974
No 137
>KOG3667|consensus
Probab=48.95 E-value=21 Score=39.17 Aligned_cols=57 Identities=25% Similarity=0.412 Sum_probs=43.1
Q ss_pred CCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEE-CCeEEEEEEEEec
Q psy10852 10 RNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKE-NNKVSHYIINKIT 67 (563)
Q Consensus 10 ~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~-~~~v~h~~I~~~~ 67 (563)
+...--|.++++.+.++|...++ |+||+|.|++..|..++.... .....|+.|..-.
T Consensus 562 ~dg~Imgfinkq~~~~ll~~~~~-GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~P~t 619 (682)
T KOG3667|consen 562 NDGVIMGFINKQQERALLMTKPD-GTFLLRFSASEEGGITIAWVEDQKQNLIMMIMPFT 619 (682)
T ss_pred hcceeeeecchhhhhhhhhcCCC-CCceeeeeccccCceeEEecccccccceeEecccc
Confidence 34456789999999999988665 999999999888887775543 3334688887533
No 138
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=47.85 E-value=38 Score=24.28 Aligned_cols=32 Identities=9% Similarity=0.129 Sum_probs=21.3
Q ss_pred CCCCCCEEEEEEecC-CCcEEEEecCCcEEEEcC
Q psy10852 403 PFKKNDILIVVSKDE-EHWWTAQNISGEVGSIPV 435 (563)
Q Consensus 403 ~~~~g~~v~v~~~~~-~~W~~~~~~~g~~G~~P~ 435 (563)
.+..|+-|.|++..- ..|.+++ .....|||++
T Consensus 22 ~l~~gtPv~i~H~S~D~~W~fV~-t~~~~GWV~s 54 (54)
T PF12913_consen 22 ALHPGTPVYILHTSRDGAWAFVQ-TPFYSGWVKS 54 (54)
T ss_dssp EE-TT-EEEEEEE-TTSSEEEEE--SS-EEEEEG
T ss_pred ccCCCCCEEEEEECCCCCEEEEe-cCCeeEeeeC
Confidence 457789999998874 5688887 5678999874
No 139
>PF09465 LBR_tudor: Lamin-B receptor of TUDOR domain; InterPro: IPR019023 The Lamin-B receptor is a chromatin and lamin binding protein in the inner nuclear membrane. It is one of the integral inner nuclear envelope membrane proteins responsible for targeting nuclear membranes to chromatin, being a downstream effector of Ran, a small Ras-like nuclear GTPase which regulates NE assembly. Lamin-B receptor interacts with importin beta, a Ran-binding protein, thereby directly contributing to the fusion of membrane vesicles and the formation of the nuclear envelope []. ; PDB: 2L8D_A 2DIG_A.
Probab=33.96 E-value=1.7e+02 Score=21.11 Aligned_cols=23 Identities=9% Similarity=0.268 Sum_probs=14.3
Q ss_pred CCCCCCCEEEEEEecCCCcEEEE
Q psy10852 402 LPFKKNDILIVVSKDEEHWWTAQ 424 (563)
Q Consensus 402 l~~~~g~~v~v~~~~~~~W~~~~ 424 (563)
..|..|+.|.+.--.+.-|+.++
T Consensus 4 ~k~~~Ge~V~~rWP~s~lYYe~k 26 (55)
T PF09465_consen 4 RKFAIGEVVMVRWPGSSLYYEGK 26 (55)
T ss_dssp SSS-SS-EEEEE-TTTS-EEEEE
T ss_pred ccccCCCEEEEECCCCCcEEEEE
Confidence 46788999988766666777776
No 140
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=31.91 E-value=67 Score=25.64 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=19.2
Q ss_pred CCCCeEEEEecCCCCcceEEEEEECC
Q psy10852 31 KDNGAFLVRDSNTILGNYVLCVKENN 56 (563)
Q Consensus 31 ~~~G~FLvR~s~~~~~~~~lsv~~~~ 56 (563)
..||+|.|+-.-...|.|.|+|..++
T Consensus 53 ~~dGty~v~y~P~~~G~~~i~V~~~g 78 (93)
T smart00557 53 NGDGTYTVSYTPTEPGDYTVTVKFGG 78 (93)
T ss_pred CCCCEEEEEEEeCCCEeEEEEEEECC
Confidence 44588888877666788888887765
No 141
>PF07935 SSV1_ORF_D-335: ORF D-335-like protein; InterPro: IPR012922 The sequences featured in this family are similar to a probable integrase (P20214 from SWISSPROT) expressed by the SSV1 virus of the archaeon Sulfolobus shibatae. This protein may be necessary for the integration of the virus into the host genome by a process of site-specific recombination [].
Probab=30.78 E-value=1.8e+02 Score=22.05 Aligned_cols=47 Identities=23% Similarity=0.377 Sum_probs=29.7
Q ss_pred CCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceecChHhhHHhhhcccCC
Q psy10852 33 NGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFSDLPSLLAFYKVHYLD 98 (563)
Q Consensus 33 ~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~sl~~Li~~y~~~~~~ 98 (563)
-|+|+||+. .|.|.+ |+|+...+++.+ +..-.+|.+.|+.|-....+
T Consensus 5 ~gd~~irE~---KGkYYV----------Y~iE~~~~G~~r------e~YVGpL~~VVe~Yik~K~g 51 (72)
T PF07935_consen 5 FGDIIIRER---KGKYYV----------YKIEKDINGERR------ETYVGPLDDVVETYIKLKEG 51 (72)
T ss_pred cCcEEEEEe---CCeEEE----------EEEEeccCCcee------eeeeccHHHHHHHHHhcccC
Confidence 388999985 345433 556654433211 34567899999999876543
No 142
>PF13983 YsaB: YsaB-like lipoprotein
Probab=30.66 E-value=63 Score=24.14 Aligned_cols=31 Identities=13% Similarity=0.301 Sum_probs=26.1
Q ss_pred CCeEEEEecCCCCcceEEEEEECCeEEEEEE
Q psy10852 33 NGAFLVRDSNTILGNYVLCVKENNKVSHYII 63 (563)
Q Consensus 33 ~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I 63 (563)
.|+|-+|-.+.....|+-|+-.+|++.|..+
T Consensus 46 QgSYEm~G~T~r~E~FvCSFD~dGqFLHLSM 76 (77)
T PF13983_consen 46 QGSYEMRGYTARKEGFVCSFDADGQFLHLSM 76 (77)
T ss_pred ccceEeecccccccceEEeECCCCcEEEeec
Confidence 4899999877767779999999999999764
No 143
>KOG1785|consensus
Probab=26.18 E-value=95 Score=31.75 Aligned_cols=43 Identities=28% Similarity=0.392 Sum_probs=36.6
Q ss_pred CccccCCCHHHHHHHHcC-CCCCCeEEEEecCCCCcceEEEEEE
Q psy10852 12 SWYFGMMTRQEAQAILLS-EKDNGAFLVRDSNTILGNYVLCVKE 54 (563)
Q Consensus 12 ~w~~g~i~r~~ae~~L~~-~~~~G~FLvR~s~~~~~~~~lsv~~ 54 (563)
+=|...|+=+|+.++|+. ....|+|+.|-|=++.|.++|-+..
T Consensus 257 PGYmAFLTYDEVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt 300 (563)
T KOG1785|consen 257 PGYMAFLTYDEVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVT 300 (563)
T ss_pred CceeEEeeHHHHHHHHHHHhcCCCceEEeeccCcccceeEEEEc
Confidence 557778999999999987 3445999999999999999998775
No 144
>KOG3508|consensus
Probab=25.61 E-value=4 Score=46.19 Aligned_cols=87 Identities=14% Similarity=0.022 Sum_probs=62.1
Q ss_pred CCCCCCCCCccccCCCHHHHHHHHcCCCCCCeEEEEecCCCCcceEEEEEECCeEEEEEEEEecCCCcceEEEeCCceec
Q psy10852 4 TFDPHDRNSWYFGMMTRQEAQAILLSEKDNGAFLVRDSNTILGNYVLCVKENNKVSHYIINKITNTEQQTCYKIGDKTFS 83 (563)
Q Consensus 4 ~~~~~~~~~w~~g~i~r~~ae~~L~~~~~~G~FLvR~s~~~~~~~~lsv~~~~~v~h~~I~~~~~~~~~~~~~~~~~~F~ 83 (563)
..+......|+|+.|...+|..+|......+.|++|.+...++.|.+-......+.|++|...... .|..+...+.
T Consensus 223 ~~~~~~~ar~q~i~i~~~e~y~~~~e~~~~~y~~lc~~lnp~l~~~~kEe~a~aLvr~l~s~~~ak----~fl~Dl~~~e 298 (932)
T KOG3508|consen 223 SPDPRIKARWQSINILPMEAYDELAETGTYNYFLLCPVLNPPLDVSLKEELANALVRVLISTGRAK----QFLMDLRMKE 298 (932)
T ss_pred CCCccccccccccccCchHHHHHHHHHhccceeeeecccCCCcchhHHHHHHHHHHHHHHhcchHH----HHhhcchhHh
Confidence 456677789999999999999999985555799999988777887665555667778877764322 2555555555
Q ss_pred ChHh-hHHhhhc
Q psy10852 84 DLPS-LLAFYKV 94 (563)
Q Consensus 84 sl~~-Li~~y~~ 94 (563)
.+.. -|+||.-
T Consensus 299 ~~r~~~idhlif 310 (932)
T KOG3508|consen 299 VLRLGDIDHLIF 310 (932)
T ss_pred hhhccchhhhhh
Confidence 5444 5666644
No 145
>PF07828 PA-IL: PA-IL-like protein; InterPro: IPR012905 The members of this family are similar to the galactophilic lectin-1 expressed by Pseudomonas aeruginosa (PA-IL, Q05097 from SWISSPROT). Lectins recognising specific carbohydrates found on the surface of host cells are known to be involved in the initiation of infections by this organism. The protein is thought to be organised into an extensive network of beta-sheets, as is the case with many other lectins []. ; PDB: 3ZYB_E 3ZYF_C 1L7L_A 3ZYH_A.
Probab=25.12 E-value=63 Score=26.99 Aligned_cols=21 Identities=38% Similarity=0.559 Sum_probs=15.1
Q ss_pred CCCeeccCCCEEEEEEeCCCCEEE
Q psy10852 496 KTALKLEIGDIIKVTKTNINGQWE 519 (563)
Q Consensus 496 ~~eL~~~~gd~i~v~~~~~~~w~~ 519 (563)
..-|.+++||+|+|+.. ||..
T Consensus 15 ~TGl~lk~GD~IsIvA~---GW~k 35 (121)
T PF07828_consen 15 NTGLILKAGDIISIVAS---GWAK 35 (121)
T ss_dssp EEEEEE-TT-EEEEEEE---EEEE
T ss_pred eeeEEEcCCCEEEEEEe---eeec
Confidence 34699999999999984 7763
No 146
>COG3807 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.05 E-value=1.6e+02 Score=25.99 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=26.1
Q ss_pred CCCCCEEEEEEecCCCeeEEeeCCCeeeEEecCcee
Q psy10852 129 FKKNDILIVVSKDEEHWWTAQNISGEVGSIPVPYVQ 164 (563)
Q Consensus 129 ~~~Gd~i~vl~~~~~~ww~g~~~~g~~G~fP~~yv~ 164 (563)
+++|.-++|+... ++|-+.+..+|..||+-.+.+.
T Consensus 61 ~k~GlPVEIvqEy-~~WRrirDadG~egWv~qslls 95 (171)
T COG3807 61 LKKGLPVEIVQEY-DNWRRIRDADGTEGWVHQSLLS 95 (171)
T ss_pred eccCCceehhhhh-hhhhheeCCCCCceeeeeeccc
Confidence 4666666666544 5788888899999999876654
No 147
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=23.28 E-value=84 Score=34.18 Aligned_cols=38 Identities=18% Similarity=0.525 Sum_probs=31.6
Q ss_pred CCEEEEEEec-----CCCcEEEEecCCcEEEEcCCCeEeccCC
Q psy10852 407 NDILIVVSKD-----EEHWWTAQNISGEVGSIPVPYVQKYSEG 444 (563)
Q Consensus 407 g~~v~v~~~~-----~~~W~~~~~~~g~~G~~P~~~v~~~~~~ 444 (563)
|++++|.++. +-+|.+....+|..||+-..||+++...
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (549)
T PRK13545 375 GDIFTISDSNKNEKKDVEWIQITLSNGEIGWISTKFIEPFKSN 417 (549)
T ss_pred CceEEEcccccccccCcceEEEEecCCccceeeeeeeeecccC
Confidence 7888887654 3479999878999999999999998765
No 148
>PF12736 CABIT: Cell-cycle sustaining, positive selection,
Probab=23.24 E-value=2.8e+02 Score=26.82 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=39.7
Q ss_pred EEEEEEEEecCCCcceEEEeCCc--eecChHhhHHhhhcccCCCccccccccccceeeeecccCCCC----------CCC
Q psy10852 58 VSHYIINKITNTEQQTCYKIGDK--TFSDLPSLLAFYKVHYLDTSPLIKPATKTIEKVIAKYDFDGN----------DPD 125 (563)
Q Consensus 58 v~h~~I~~~~~~~~~~~~~~~~~--~F~sl~~Li~~y~~~~~~~~~L~~p~~~~~~~~~a~~d~~~~----------~~~ 125 (563)
-.||.|-..-.| .|.+-.. .|.|+.||+ .+.. ...+.+..++... ..+
T Consensus 50 g~~~~IP~~y~G----~F~~~~~~~~f~tV~eL~---~~~~-------------p~~v~~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T PF12736_consen 50 GPHFLIPLNYPG----KFKRLPRPGPFETVYELL---SRGF-------------PLRVVVTKDITFSSASGENSSVSDYG 109 (256)
T ss_pred CCEEEECCcccc----eEEECCCccccCCHHHHh---hccC-------------CCEEEEcCccceecccccccccccCC
Confidence 357888766655 4776443 999999998 1110 0123344444443 367
Q ss_pred CCcCCCCCEEEEE
Q psy10852 126 DLPFKKNDILIVV 138 (563)
Q Consensus 126 eLs~~~Gd~i~vl 138 (563)
...+.+||.+.++
T Consensus 110 ~~~v~~Ge~L~l~ 122 (256)
T PF12736_consen 110 KRTVPAGEVLRLL 122 (256)
T ss_pred ceEECCCCEEEEE
Confidence 8889999999998
No 149
>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod. Whereas their actin-binding domains consist of two calponin homology domains (see IPR001715 from INTERPRO), their rods fall into three families. The rod domain of the family including the Dictyostelium discoideum (Slime mould) gelation factor (ABP120) and human filamin (ABP280) is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich []. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a beta-sandwich, formed by two beta-sheets arranged in an immunoglobulin-like fold [, ]. Because conserved residues that form the core of the repeats are preserved in filamin, the repeat structure should be common to the members of the gelation factor/filamin family. The head to tail homodimerisation is crucial to the function of the ABP120 and ABP280 proteins. This interaction involves a small portion at the distal end of the rod domains. For the gelation factor it has been shown that the carboxy-terminal repeat 6 dimerises through a double edge-to-edge extension of the beta-sheet and that repeat 5 contributes to dimerisation to some extent [, , ].; PDB: 2DI9_A 2EEC_A 2DIC_A 2EEA_A 2DMC_A 2EE9_A 2D7O_A 2D7N_A 2K7P_A 2NQC_A ....
Probab=22.33 E-value=96 Score=24.83 Aligned_cols=24 Identities=33% Similarity=0.504 Sum_probs=15.1
Q ss_pred CCeEEEEecCCCCcceEEEEEECC
Q psy10852 33 NGAFLVRDSNTILGNYVLCVKENN 56 (563)
Q Consensus 33 ~G~FLvR~s~~~~~~~~lsv~~~~ 56 (563)
+|.|.|+-.-...|.|.|+|..++
T Consensus 69 ~G~y~v~y~p~~~G~y~i~V~~~g 92 (101)
T PF00630_consen 69 DGTYTVSYTPTEPGKYKISVKING 92 (101)
T ss_dssp SSEEEEEEEESSSEEEEEEEEESS
T ss_pred CCEEEEEEEeCccEeEEEEEEECC
Confidence 466666655555666666666654
No 150
>PF05641 Agenet: Agenet domain; InterPro: IPR008395 This domain is related to the TUDOR domain IPR008191 from INTERPRO []. The function of the agenet domain is unknown. This signature matches one of the two Agenet domains in the FMR proteins [].; GO: 0003723 RNA binding; PDB: 2BKD_N 3O8V_A 3KUF_A 3H8Z_A.
Probab=22.14 E-value=91 Score=23.31 Aligned_cols=22 Identities=14% Similarity=0.299 Sum_probs=12.6
Q ss_pred ccCCCEEEEEEeCC---CCEEEEEe
Q psy10852 501 LEIGDIIKVTKTNI---NGQWEGEL 522 (563)
Q Consensus 501 ~~~gd~i~v~~~~~---~~w~~g~~ 522 (563)
|++|+.|.|....+ .-|+.+.+
T Consensus 1 F~~G~~VEV~s~e~g~~gaWf~a~V 25 (68)
T PF05641_consen 1 FKKGDEVEVSSDEDGFRGAWFPATV 25 (68)
T ss_dssp --TT-EEEEEE-SBTT--EEEEEEE
T ss_pred CCCCCEEEEEEcCCCCCcEEEEEEE
Confidence 78999999998664 45666654
No 151
>KOG1769|consensus
Probab=21.16 E-value=4.6e+02 Score=21.40 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=30.1
Q ss_pred cChHhhHHhhhccc-CCCccccccccccceeeeeccc----CCCCCCCCCcCCCCCEEEEEEec
Q psy10852 83 SDLPSLLAFYKVHY-LDTSPLIKPATKTIEKVIAKYD----FDGNDPDDLPFKKNDILIVVSKD 141 (563)
Q Consensus 83 ~sl~~Li~~y~~~~-~~~~~L~~p~~~~~~~~~a~~d----~~~~~~~eLs~~~Gd~i~vl~~~ 141 (563)
..|..|.++|+... +....+ +=+|| -..+++++|-++-||.|.+....
T Consensus 41 t~LkKLM~aYc~r~Gl~~~s~-----------RFlFdG~rI~~~~TP~~L~mEd~D~Iev~~~q 93 (99)
T KOG1769|consen 41 TPLKKLMKAYCERQGLSMNSL-----------RFLFDGQRIRETHTPADLEMEDGDEIEVVQEQ 93 (99)
T ss_pred ChHHHHHHHHHHHcCCccceE-----------EEEECCcCcCCCCChhhhCCcCCcEEEEEeec
Confidence 45789999998752 111111 11111 12357899999999999987543
No 152
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=20.40 E-value=4.1e+02 Score=20.55 Aligned_cols=43 Identities=26% Similarity=0.419 Sum_probs=33.0
Q ss_pred cccccCHHHHHHHHhcC-CCCCcEEEEecCCCCcceEEEEEeCC
Q psy10852 289 YFGMMTRQEAQAILLSE-KDNGAFLVRDSNTILGNYVLCVKENN 331 (563)
Q Consensus 289 ~~g~~sr~~A~~~l~~~-~~~G~FlvR~S~~~~g~~~ls~~~~~ 331 (563)
|+.-++-.+.+..|..- ...|+|+.|-|-+.-|.+++-....+
T Consensus 5 Y~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~d 48 (86)
T PF02762_consen 5 YMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQD 48 (86)
T ss_dssp BETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEETT
T ss_pred eeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcCC
Confidence 44557778888888873 56699999999999999998887654
Done!