BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10859
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R9Z1|VPS29_PONAB Vacuolar protein sorting-associated protein 29 OS=Pongo abelii
GN=VPS29 PE=2 SV=1
Length = 182
Score = 294 bits (753), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 164/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|B2RZ78|VPS29_RAT Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus
GN=Vps29 PE=1 SV=2
Length = 182
Score = 294 bits (752), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 164/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDESLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|Q6DEU3|VPS29_XENTR Vacuolar protein sorting-associated protein 29 OS=Xenopus
tropicalis GN=vps29 PE=2 SV=1
Length = 182
Score = 294 bits (752), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 164/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE+FDYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQLDVDILISGHT KFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|Q6GP62|VPS29_XENLA Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis
GN=vps29 PE=2 SV=1
Length = 182
Score = 294 bits (752), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 164/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE+FDYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQLDVDILISGHT KFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|Q9QZ88|VPS29_MOUSE Vacuolar protein sorting-associated protein 29 OS=Mus musculus
GN=Vps29 PE=1 SV=1
Length = 182
Score = 294 bits (752), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 164/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|Q7ZV68|VPS29_DANRE Vacuolar protein sorting-associated protein 29 OS=Danio rerio
GN=vps29 PE=2 SV=1
Length = 182
Score = 292 bits (748), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 165/224 (73%), Gaps = 42/224 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQLDVDILISGHTHKFEA+E+ENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFEAFENENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
++ LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 139 YSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>sp|Q3T0M0|VPS29_BOVIN Vacuolar protein sorting-associated protein 29 OS=Bos taurus
GN=VPS29 PE=2 SV=1
Length = 186
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 163/223 (73%), Gaps = 42/223 (18%)
Query: 2 LVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61
LVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRG 65
Query: 62 DFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQ 121
DFDE +Y PE+KVVTVGQ
Sbjct: 66 DFDENLNY------------------------------------------PEQKVVTVGQ 83
Query: 122 FRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAF 181
F+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA+
Sbjct: 84 FKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAY 143
Query: 182 NPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 144 NALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 186
>sp|Q9UBQ0|VPS29_HUMAN Vacuolar protein sorting-associated protein 29 OS=Homo sapiens
GN=VPS29 PE=1 SV=1
Length = 182
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 163/223 (73%), Gaps = 42/223 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TKE++DYLKTLA DVH+VR
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GDFDE +Y PE+KVVTVG
Sbjct: 61 GDFDENLNY------------------------------------------PEQKVVTVG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QF+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA
Sbjct: 79 QFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKK 223
+N LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKK
Sbjct: 139 YNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181
>sp|Q5ZIL2|VPS29_CHICK Vacuolar protein sorting-associated protein 29 OS=Gallus gallus
GN=VPS29 PE=2 SV=1
Length = 186
Score = 289 bits (739), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 163/223 (73%), Gaps = 42/223 (18%)
Query: 2 LVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61
LVLVLGDLHIPHR + LPAKFKKLLVPG+IQHILCTGNL TK+T+DYLKTLA DVHVVRG
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRG 65
Query: 62 DFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQ 121
DFDE +Y PE+KVVTVGQ
Sbjct: 66 DFDENLNY------------------------------------------PEQKVVTVGQ 83
Query: 122 FRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAF 181
F+IGL HGH +IPWGD +LALLQRQ DVDILISGHTHKFEA+EHENKFYINPGSATGA+
Sbjct: 84 FKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAY 143
Query: 182 NPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224
+ LE + PSFVLMDIQ+S VVTYVYQLI D+V VERI+YKKS
Sbjct: 144 HALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 186
>sp|Q54IF7|VPS29_DICDI Vacuolar protein sorting-associated protein 29 OS=Dictyostelium
discoideum GN=vps29 PE=3 SV=1
Length = 183
Score = 237 bits (604), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 145/223 (65%), Gaps = 42/223 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
M ++ +GD+H+PHR+ G+P +FKKLLVP +IQHILCTGNLV+KE DY K L SDVH+VR
Sbjct: 1 MFIIAIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVR 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
GD DE TSYP+ K+V++GQF+ GLCHGH I+PWGD +LA LQRQ
Sbjct: 61 GDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQ--------------- 105
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
LDVD+LISGHTH E +E K ++NPGSATGA
Sbjct: 106 ---------------------------LDVDVLISGHTHVLEVFESNGKLFVNPGSATGA 138
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKK 223
F+ + V PSFVLMD+QS+N+ Y+Y+LI +V VE+ID+ K
Sbjct: 139 FSNISNDVIPSFVLMDVQSNNITVYIYKLIDGQVKVEKIDHVK 181
>sp|Q9STT2|VPS29_ARATH Vacuolar protein sorting-associated protein 29 OS=Arabidopsis
thaliana GN=VPS29 PE=2 SV=1
Length = 190
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/223 (51%), Positives = 144/223 (64%), Gaps = 42/223 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
+LVL LGDLH+PHR + LP KFK +LVPG+IQHI+CTGNL KE DYLKT+ D+H+VR
Sbjct: 2 VLVLALGDLHVPHRAADLPPKFKSMLVPGKIQHIICTGNLCIKEIHDYLKTICPDLHIVR 61
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
G+FDE YPE K +T+GQF++GLCHGH +IPWGD ++LA+LQR
Sbjct: 62 GEFDEDARYPENKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQR---------------- 105
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
QL VDIL++GHTH+F AY+HE INPGSATGA
Sbjct: 106 --------------------------QLGVDILVTGHTHQFTAYKHEGGVVINPGSATGA 139
Query: 181 FNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKK 223
++ + VNPSFVLMDI V YVY+LI EV V++I++KK
Sbjct: 140 YSSINQDVNPSFVLMDIDGFRAVVYVYELIDGEVKVDKIEFKK 182
>sp|Q9UTI5|VPS29_SCHPO Vacuolar protein sorting-associated protein 29
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps29 PE=3 SV=1
Length = 187
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 129/227 (56%), Gaps = 46/227 (20%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60
MLVLV+GD HIP R L KF++LL+PG+I I+C GNL + ++YLK + SD+ +V+
Sbjct: 1 MLVLVIGDFHIPDRAPKLSEKFRQLLIPGKISQIICLGNLTSTSVYEYLKHVCSDLKLVK 60
Query: 61 GDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVG 120
G FD + P G+ +T+G
Sbjct: 61 GAFDISSKAP-----IAGK-------------------------------------ITLG 78
Query: 121 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 180
F+IG +GH ++P PEAL++L R++D DIL+ G THKF AYE + F++NPGSATGA
Sbjct: 79 SFKIGYTNGHLVVPQDSPEALSILAREMDADILLFGGTHKFAAYELDGCFFVNPGSATGA 138
Query: 181 FNPL----EPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKK 223
N + K+ PSFVLMD+Q + ++ YVY++ EV VE++ Y+K
Sbjct: 139 PNVSAVEDDEKIVPSFVLMDVQGAVLILYVYRIFDGEVRVEKMQYRK 185
>sp|P38759|VPS29_YEAST Vacuolar protein sorting-associated protein 29 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS29 PE=1
SV=1
Length = 282
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 111/205 (54%), Gaps = 37/205 (18%)
Query: 1 MLVLVLGDLHIPHRTSGLPAKFKKLL-VPGRIQHILCTGNLVTKETFDYLK---TLASDV 56
ML+L L D HIP R + LP KFKKLL VP +I + GN + +++D+LK +++++
Sbjct: 1 MLLLALSDAHIPDRATDLPVKFKKLLSVPDKISQVALLGN--STKSYDFLKFVNQISNNI 58
Query: 57 HVVRGDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKV 116
+VRG+FD +GH +P + + R ++ P +
Sbjct: 59 TIVRGEFD---------------------NGH--LPSTKKDKASDNSRPME--EIPMNSI 93
Query: 117 VTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGS 176
+ G +IG C G+ ++P DP +L L RQLDVDIL+ G TH EAY E KF++NPGS
Sbjct: 94 IRQGALKIGCCSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGS 153
Query: 177 ATGAFNPLEPKVNPSFVLMDIQSSN 201
TGAFN P ++ D++ S+
Sbjct: 154 CTGAFNTDWP------IVFDVEDSD 172
>sp|O27802|Y1774_METTH Putative metallophosphoesterase MTH_1774 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1774 PE=3 SV=1
Length = 172
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 46/179 (25%)
Query: 1 MLVLVLGDLHIPHRTSGLP-AKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVV 59
ML+ V+ D HIP R S +P A F ++ IL G+L + + L+TLA V V
Sbjct: 1 MLIGVISDTHIPDRASEIPEAVFDAF---RDVELILHAGDLTSPDILTELETLAP-VECV 56
Query: 60 RGDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTV 119
+G+ D G P ++ +
Sbjct: 57 QGNMDRHY----------------------------------------GIETPRSRLFEI 76
Query: 120 GQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSAT 178
FR+GL HG ++ P GD + L L +L D+LISGHTH+ E E+ +NPGS T
Sbjct: 77 ESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVLLNPGSPT 134
>sp|Q58040|Y623_METJA Putative metallophosphoesterase MJ0623 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0623 PE=3 SV=1
Length = 192
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 48/186 (25%)
Query: 1 MLVLVLGDLHIPHRTSGLP-AKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVV 59
ML+ V+ D H+ R LP A F + + I+ G++ KE D LK LA
Sbjct: 34 MLIGVISDTHLYDRAFELPKAVFDEF---SNVDLIIHCGDVTDKEILDSLKDLA------ 84
Query: 60 RGDFDEGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTV 119
KVV V + +D + P K+++ +
Sbjct: 85 -------------KVVAV-------------------------KGNMDYLNLPRKEILEI 106
Query: 120 GQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATG 179
+IG+ HG + P GD L LL +++ VD+LISGHTH + + +NPGS T
Sbjct: 107 NDIKIGVIHGDVVYPRGDRLKLRLLGKEMGVDVLISGHTHTPFIDDCRDILLLNPGSPTV 166
Query: 180 AFNPLE 185
PL+
Sbjct: 167 PRCPLK 172
>sp|P67095|YFCE_ECOLI Phosphodiesterase YfcE OS=Escherichia coli (strain K12) GN=yfcE
PE=1 SV=1
Length = 184
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 110 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENK 169
+ P ++V+ Q R+ L HGH PE L L + D+L+ GHTH A +
Sbjct: 88 TAPWQQVLLEKQ-RLFLTHGHLF----GPENLPALNQN---DVLVYGHTHLPVAEQRGEI 139
Query: 170 FYINPGSAT 178
F+ NPGS +
Sbjct: 140 FHFNPGSVS 148
>sp|P67096|YFCE_ECOL6 Phosphodiesterase YfcE OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yfcE PE=3 SV=1
Length = 184
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 110 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENK 169
+ P ++V+ Q R+ L HGH PE L L + D+L+ GHTH A +
Sbjct: 88 TAPWQQVLLEKQ-RLFLTHGHLF----GPENLPALNQN---DVLVYGHTHLPVAEQRGEI 139
Query: 170 FYINPGSAT 178
F+ NPGS +
Sbjct: 140 FHFNPGSVS 148
>sp|P67097|YFCE_ECO57 Phosphodiesterase YfcE OS=Escherichia coli O157:H7 GN=yfcE PE=3
SV=1
Length = 184
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 110 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENK 169
+ P ++V+ Q R+ L HGH PE L L + D+L+ GHTH A +
Sbjct: 88 TAPWQQVLLEKQ-RLFLTHGHLF----GPENLPALNQN---DVLVYGHTHLPVAEQRGEI 139
Query: 170 FYINPGSAT 178
F+ NPGS +
Sbjct: 140 FHFNPGSVS 148
>sp|P47449|Y207_MYCGE Putative metallophosphoesterase MG207 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG207 PE=3
SV=2
Length = 163
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 113 EKKVVTVGQFRIGLCHGH-----DIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHE 167
E ++ +GQ L HGH ++ W + L L +Q D+LI GH+H E+
Sbjct: 60 EIEIFQLGQINFVLMHGHQAPRDNLKKWY--QLLVLKAQQYPCDVLIFGHSH----IEYT 113
Query: 168 NKF----YINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQ 208
NK INPGS N +F++ + +++ + YQ
Sbjct: 114 NKINMIQLINPGSLQLPRNQTNTPSYCTFIVNKDELTDLTIHYYQ 158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,520,423
Number of Sequences: 539616
Number of extensions: 4045782
Number of successful extensions: 8032
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7995
Number of HSP's gapped (non-prelim): 36
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)