Query psy10859
Match_columns 224
No_of_seqs 134 out of 1393
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 20:16:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10859.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10859hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z2w_A Vacuolar protein sortin 100.0 7.7E-35 2.6E-39 220.3 24.2 182 1-224 11-192 (192)
2 2a22_A Vacuolar protein sortin 100.0 1.9E-34 6.6E-39 221.8 24.6 190 1-223 26-215 (215)
3 3ck2_A Conserved uncharacteriz 100.0 6.7E-29 2.3E-33 185.2 13.4 168 1-221 7-174 (176)
4 2kkn_A Uncharacterized protein 100.0 4.8E-28 1.6E-32 180.5 16.6 156 1-209 23-178 (178)
5 3ib7_A ICC protein; metallopho 100.0 1.2E-26 4.2E-31 188.8 20.4 204 1-213 26-282 (330)
6 3qfm_A SAPH, putative uncharac 99.9 3.2E-27 1.1E-31 187.2 13.7 196 1-210 12-230 (270)
7 1s3l_A Hypothetical protein MJ 99.9 4.3E-26 1.5E-30 171.7 15.4 160 1-204 26-187 (190)
8 3d03_A Phosphohydrolase; glyce 99.9 2.6E-25 8.8E-30 176.4 20.5 201 1-210 1-255 (274)
9 1nnw_A Hypothetical protein; s 99.9 4E-26 1.4E-30 179.4 12.7 194 1-210 2-225 (252)
10 1uf3_A Hypothetical protein TT 99.9 9.1E-26 3.1E-30 174.3 14.0 184 1-209 6-227 (228)
11 2yvt_A Hypothetical protein AQ 99.9 3.3E-25 1.1E-29 174.7 15.6 185 1-205 6-257 (260)
12 3rqz_A Metallophosphoesterase; 99.9 2.3E-26 7.8E-31 180.2 6.4 188 1-210 4-221 (246)
13 1su1_A Hypothetical protein YF 99.9 7.8E-24 2.7E-28 161.7 15.6 165 1-217 26-203 (208)
14 2nxf_A Putative dimetal phosph 99.9 4E-23 1.4E-27 167.0 17.0 197 1-209 6-313 (322)
15 2xmo_A LMO2642 protein; phosph 99.9 1E-22 3.4E-27 172.3 17.7 196 1-211 40-334 (443)
16 4fbk_A DNA repair and telomere 99.9 5.5E-22 1.9E-26 165.8 19.4 214 1-223 77-380 (472)
17 3av0_A DNA double-strand break 99.9 1.4E-22 4.6E-27 168.6 15.6 199 1-214 21-269 (386)
18 4fbw_A DNA repair protein RAD3 99.9 1.9E-22 6.5E-27 167.3 15.0 214 1-223 14-317 (417)
19 3t1i_A Double-strand break rep 99.9 4E-22 1.4E-26 166.1 16.5 213 1-223 33-336 (431)
20 1ute_A Protein (II purple acid 99.9 2.1E-22 7.3E-27 162.2 13.7 205 1-215 7-296 (313)
21 1xm7_A Hypothetical protein AQ 99.9 4.9E-22 1.7E-26 150.3 13.5 148 1-183 2-178 (195)
22 2q8u_A Exonuclease, putative; 99.9 4.3E-22 1.5E-26 162.7 12.2 206 1-220 19-290 (336)
23 3rl5_A Metallophosphoesterase 99.9 1.3E-20 4.4E-25 149.7 18.1 163 1-182 60-280 (296)
24 3tho_B Exonuclease, putative; 99.9 1.4E-20 5E-25 155.9 16.3 210 1-220 1-272 (379)
25 1ii7_A MRE11 nuclease; RAD50, 99.8 2E-19 6.7E-24 146.8 17.1 196 1-220 1-279 (333)
26 3tgh_A Glideosome-associated p 99.8 1.6E-19 5.4E-24 147.1 14.8 210 1-223 4-306 (342)
27 1g5b_A Serine/threonine protei 99.8 6.3E-20 2.2E-24 141.3 9.0 169 1-179 13-208 (221)
28 1xzw_A Purple acid phosphatase 99.8 2.4E-17 8.3E-22 138.6 18.7 212 1-223 127-421 (426)
29 2qfp_A Purple acid phosphatase 99.7 1.6E-16 5.4E-21 133.6 18.3 213 1-223 120-414 (424)
30 2qjc_A Diadenosine tetraphosph 99.7 1.8E-16 6.1E-21 124.9 7.3 176 1-202 19-241 (262)
31 1hp1_A 5'-nucleotidase; metall 99.4 3.3E-11 1.1E-15 103.6 19.2 184 1-204 9-284 (516)
32 2z72_A Protein-tyrosine-phosph 99.4 6E-12 2.1E-16 102.6 12.4 63 1-66 71-153 (342)
33 1wao_1 Serine/threonine protei 99.3 2.9E-11 9.9E-16 103.0 14.3 63 1-66 213-285 (477)
34 3qfk_A Uncharacterized protein 99.3 1.6E-10 5.6E-15 99.5 15.8 171 1-179 20-269 (527)
35 2wdc_A SOXB, sulfur oxidation 99.2 8E-10 2.7E-14 95.7 18.3 144 31-202 123-324 (562)
36 2yeq_A Apased, PHOD, alkaline 99.2 4E-09 1.4E-13 90.6 22.1 198 1-211 117-461 (527)
37 2z1a_A 5'-nucleotidase; metal- 99.2 3.1E-10 1.1E-14 98.2 14.5 65 1-66 30-119 (552)
38 3ive_A Nucleotidase; structura 99.2 1.4E-09 4.9E-14 93.2 17.6 171 1-179 7-257 (509)
39 3h63_A Serine/threonine-protei 99.2 7E-10 2.4E-14 88.7 13.5 63 1-66 60-132 (315)
40 2ie4_C PP2A-alpha;, serine/thr 99.1 8.2E-09 2.8E-13 82.6 17.0 64 1-67 50-122 (309)
41 3ztv_A NAD nucleotidase, NADN; 99.1 2.1E-09 7.2E-14 93.5 14.2 66 1-67 13-107 (579)
42 2dfj_A Diadenosinetetraphospha 99.0 9.3E-11 3.2E-15 92.9 2.8 63 1-66 1-69 (280)
43 1fjm_A Protein serine/threonin 99.0 2E-08 6.7E-13 81.0 14.8 63 1-66 57-128 (330)
44 3icf_A PPT, serine/threonine-p 99.0 2.5E-09 8.4E-14 86.2 9.4 63 1-66 64-136 (335)
45 4h2g_A 5'-nucleotidase; dimer, 98.9 3E-08 1E-12 85.7 15.2 65 1-66 26-118 (546)
46 3jyf_A 2',3'-cyclic nucleotide 98.9 1E-08 3.4E-13 83.3 10.0 60 120-179 202-278 (339)
47 3e7a_A PP-1A, serine/threonine 98.8 1.8E-08 6.1E-13 80.0 10.0 63 1-66 56-127 (299)
48 1aui_A Calcineurin, serine/thr 98.8 2.6E-08 8.9E-13 84.0 11.3 63 1-66 83-154 (521)
49 3gve_A YFKN protein; alpha-bet 98.8 4.7E-08 1.6E-12 79.5 12.5 60 120-179 208-285 (341)
50 1t71_A Phosphatase, conserved 98.8 2E-08 6.7E-13 79.1 9.4 155 1-173 5-202 (281)
51 3ll8_A Serine/threonine-protei 98.7 8.2E-08 2.8E-12 77.8 11.1 63 1-66 70-141 (357)
52 3c9f_A 5'-nucleotidase; 2',3'- 98.7 1.3E-06 4.3E-11 75.6 18.9 165 1-178 16-260 (557)
53 4h1s_A 5'-nucleotidase; hydrol 98.7 8E-07 2.7E-11 76.5 15.7 66 1-67 4-97 (530)
54 1t70_A Phosphatase; crystal, X 98.6 8.5E-07 2.9E-11 68.9 12.4 154 1-173 1-192 (255)
55 3e0j_A DNA polymerase subunit 98.5 1.1E-07 3.7E-12 79.7 5.1 180 2-208 202-460 (476)
56 2z06_A Putative uncharacterize 98.4 6.4E-06 2.2E-10 63.7 13.7 153 1-173 1-189 (252)
57 3flo_A DNA polymerase alpha su 97.8 0.002 6.8E-08 53.9 16.5 50 147-201 380-429 (460)
58 2d00_A V-type ATP synthase sub 88.9 0.56 1.9E-05 31.1 4.2 64 1-64 4-84 (109)
59 2ov6_A V-type ATP synthase sub 86.6 0.42 1.4E-05 31.2 2.5 63 1-63 1-81 (101)
60 3aon_B V-type sodium ATPase su 74.6 0.71 2.4E-05 30.9 0.3 64 1-65 3-82 (115)
61 3w01_A Heptaprenylglyceryl pho 59.9 48 0.0016 25.0 7.8 45 21-66 28-77 (235)
62 3v7e_A Ribosome-associated pro 57.4 17 0.00059 22.3 4.2 44 21-65 18-65 (82)
63 3j21_Z 50S ribosomal protein L 57.1 26 0.00089 22.2 5.2 43 21-64 22-68 (99)
64 4hwg_A UDP-N-acetylglucosamine 54.3 11 0.00036 30.7 3.6 42 21-62 85-126 (385)
65 3jyw_G 60S ribosomal protein L 54.2 33 0.0011 22.6 5.4 46 21-66 32-81 (113)
66 1w41_A 50S ribosomal protein L 54.1 27 0.00091 22.3 4.9 43 21-64 23-70 (101)
67 2vvr_A Ribose-5-phosphate isom 52.3 7.4 0.00025 27.1 2.0 33 1-38 2-34 (149)
68 3cpq_A 50S ribosomal protein L 52.0 31 0.0011 22.4 5.1 41 21-62 28-72 (110)
69 3md9_A Hemin-binding periplasm 50.7 25 0.00085 26.3 5.0 34 28-61 57-90 (255)
70 2r7a_A Bacterial heme binding 49.7 26 0.0009 26.1 5.0 34 28-61 57-90 (256)
71 2vqe_B 30S ribosomal protein S 49.1 26 0.00089 26.8 4.8 32 29-60 157-188 (256)
72 3vzx_A Heptaprenylglyceryl pho 48.7 40 0.0014 25.2 5.7 45 21-66 23-72 (228)
73 2xzm_U Ribosomal protein L7AE 46.0 36 0.0012 22.8 4.7 46 21-66 31-80 (126)
74 2r79_A Periplasmic binding pro 44.2 34 0.0012 26.0 5.0 34 28-61 57-90 (283)
75 3v7q_A Probable ribosomal prot 43.3 54 0.0018 20.8 5.1 44 21-64 26-72 (101)
76 3he8_A Ribose-5-phosphate isom 43.0 6.3 0.00022 27.5 0.5 33 1-38 1-33 (149)
77 2lbw_A H/ACA ribonucleoprotein 42.6 39 0.0013 22.4 4.4 46 21-66 27-76 (121)
78 4a17_F RPL7A, 60S ribosomal pr 42.0 56 0.0019 24.9 5.5 46 21-66 131-180 (255)
79 3iz5_f 60S ribosomal protein L 41.7 47 0.0016 21.7 4.6 46 21-66 33-81 (112)
80 1mjh_A Protein (ATP-binding do 41.0 56 0.0019 22.0 5.3 15 48-62 146-160 (162)
81 1n2z_A Vitamin B12 transport p 39.7 35 0.0012 25.2 4.3 33 28-60 55-87 (245)
82 3s5p_A Ribose 5-phosphate isom 38.9 7.9 0.00027 27.5 0.5 28 1-32 22-49 (166)
83 3ph3_A Ribose-5-phosphate isom 38.8 8 0.00027 27.6 0.5 33 1-38 21-53 (169)
84 2zkq_b 40S ribosomal protein S 37.2 54 0.0019 25.6 5.0 32 29-60 117-148 (295)
85 3psh_A Protein HI_1472; substr 36.9 45 0.0015 25.9 4.7 35 28-63 82-116 (326)
86 2ale_A SNU13, NHP2/L7AE family 36.2 43 0.0015 22.7 3.9 45 22-66 40-88 (134)
87 2xzm_B RPS0E; ribosome, transl 36.1 50 0.0017 25.0 4.5 32 29-60 113-144 (241)
88 1rlg_A 50S ribosomal protein L 35.9 82 0.0028 20.6 5.2 45 21-65 34-82 (119)
89 3on1_A BH2414 protein; structu 35.7 58 0.002 20.6 4.3 44 21-64 25-71 (101)
90 3bch_A 40S ribosomal protein S 35.3 61 0.0021 24.7 4.9 32 29-60 150-181 (253)
91 4em8_A Ribose 5-phosphate isom 35.2 9.7 0.00033 26.5 0.4 28 1-32 8-35 (148)
92 2dfj_A Diadenosinetetraphospha 34.4 39 0.0013 26.0 3.9 44 149-202 219-263 (280)
93 3k7p_A Ribose 5-phosphate isom 34.4 14 0.00046 26.6 1.1 33 1-38 23-57 (179)
94 3tnj_A Universal stress protei 34.1 54 0.0019 21.7 4.3 14 49-62 135-148 (150)
95 3j20_B 30S ribosomal protein S 33.5 63 0.0022 23.7 4.6 31 30-60 111-141 (202)
96 3ot5_A UDP-N-acetylglucosamine 32.8 28 0.00095 28.3 2.9 41 21-61 105-146 (403)
97 3iz5_H 60S ribosomal protein L 32.3 79 0.0027 24.0 5.0 45 21-65 134-182 (258)
98 3sk3_A Acetate kinase, acetoki 31.8 32 0.0011 28.3 3.1 25 155-179 6-31 (415)
99 3u5c_A 40S ribosomal protein S 31.8 73 0.0025 24.2 4.8 31 29-59 116-146 (252)
100 3gv0_A Transcriptional regulat 31.7 64 0.0022 24.2 4.7 41 21-61 57-97 (288)
101 2fc3_A 50S ribosomal protein L 31.6 89 0.003 20.6 4.8 44 22-65 36-83 (124)
102 1vi6_A 30S ribosomal protein S 31.2 81 0.0028 23.2 4.9 32 29-60 114-145 (208)
103 2aif_A Ribosomal protein L7A; 30.7 85 0.0029 21.2 4.7 44 22-65 49-96 (135)
104 3hcw_A Maltose operon transcri 30.6 85 0.0029 23.6 5.3 41 22-62 60-100 (295)
105 3bbn_B Ribosomal protein S2; s 30.6 88 0.003 23.4 5.1 31 30-60 157-187 (231)
106 2ll1_A U1-TRTX-SP1A; toxin; NM 30.5 13 0.00045 17.7 0.3 9 155-163 2-10 (33)
107 4e7p_A Response regulator; DNA 30.4 1.1E+02 0.0039 19.9 6.1 43 22-64 58-105 (150)
108 3s3t_A Nucleotide-binding prot 30.3 1.1E+02 0.0039 19.8 5.5 9 31-39 86-94 (146)
109 2re2_A Uncharacterized protein 29.9 62 0.0021 21.8 3.9 36 21-59 70-105 (136)
110 3k4h_A Putative transcriptiona 29.7 81 0.0028 23.5 5.0 41 22-62 61-101 (292)
111 2dum_A Hypothetical protein PH 29.7 1.2E+02 0.004 20.6 5.5 12 50-61 145-156 (170)
112 1xbi_A 50S ribosomal protein L 29.5 73 0.0025 21.0 4.1 44 22-65 37-84 (120)
113 3dzc_A UDP-N-acetylglucosamine 29.4 33 0.0011 27.7 2.8 41 21-61 102-143 (396)
114 2pln_A HP1043, response regula 29.3 67 0.0023 20.6 4.0 40 24-64 56-97 (137)
115 2vvp_A Ribose-5-phosphate isom 29.3 8.7 0.0003 27.2 -0.6 33 1-38 4-36 (162)
116 3nkl_A UDP-D-quinovosamine 4-d 29.2 62 0.0021 21.4 3.8 46 20-65 55-104 (141)
117 1jmv_A USPA, universal stress 28.9 82 0.0028 20.5 4.4 8 53-60 130-137 (141)
118 3h75_A Periplasmic sugar-bindi 28.5 68 0.0023 24.9 4.5 42 21-62 52-95 (350)
119 3nhm_A Response regulator; pro 28.4 1.1E+02 0.0039 19.2 5.4 43 23-65 40-89 (133)
120 3huu_A Transcription regulator 27.9 91 0.0031 23.5 5.1 42 22-63 75-116 (305)
121 1vq8_F 50S ribosomal protein L 27.9 90 0.0031 20.5 4.3 44 22-65 37-84 (120)
122 3o85_A Ribosomal protein L7AE; 27.5 1.2E+02 0.004 20.1 4.8 45 22-66 39-87 (122)
123 1vkf_A Glycerol uptake operon 27.3 81 0.0028 22.8 4.2 38 29-66 30-69 (188)
124 2jnb_A NHP2-like protein 1; sp 27.3 38 0.0013 23.4 2.4 42 24-65 60-105 (144)
125 3hdg_A Uncharacterized protein 27.2 92 0.0032 19.9 4.4 42 23-64 44-90 (137)
126 4hn9_A Iron complex transport 27.0 51 0.0018 25.8 3.5 31 28-60 114-144 (335)
127 3qk7_A Transcriptional regulat 26.8 83 0.0029 23.7 4.6 42 20-61 55-96 (294)
128 3sgw_A Ribose 5-phosphate isom 26.6 19 0.00064 26.0 0.7 35 1-39 30-65 (184)
129 2lpm_A Two-component response 26.6 76 0.0026 20.9 3.8 43 24-66 47-92 (123)
130 3eod_A Protein HNR; response r 26.6 1.2E+02 0.0042 19.0 5.9 44 22-65 43-91 (130)
131 2z08_A Universal stress protei 26.2 1.2E+02 0.0042 19.5 4.9 33 30-64 77-109 (137)
132 3iz6_A 40S ribosomal protein S 26.1 1.1E+02 0.0036 24.0 4.9 30 29-58 121-150 (305)
133 1gc5_A ADP-dependent glucokina 25.5 56 0.0019 27.4 3.5 35 2-38 205-241 (467)
134 3kts_A Glycerol uptake operon 25.4 84 0.0029 22.8 4.0 44 20-64 20-65 (192)
135 3kke_A LACI family transcripti 25.4 1.4E+02 0.0048 22.5 5.7 40 22-62 63-103 (303)
136 3jy6_A Transcriptional regulat 25.3 1.3E+02 0.0043 22.3 5.3 38 22-60 55-92 (276)
137 3hv2_A Response regulator/HD d 24.6 1.4E+02 0.0048 19.5 5.1 41 24-64 52-97 (153)
138 2qai_A V-type ATP synthase sub 24.2 32 0.0011 22.6 1.5 10 1-10 1-10 (111)
139 3izc_H 60S ribosomal protein R 24.1 99 0.0034 23.6 4.3 46 21-66 138-187 (256)
140 1tq8_A Hypothetical protein RV 23.9 1.4E+02 0.0046 20.3 4.9 10 31-40 98-107 (163)
141 2zkr_f 60S ribosomal protein L 23.9 1.3E+02 0.0043 23.1 4.9 46 21-66 142-191 (266)
142 1q77_A Hypothetical protein AQ 23.1 1.4E+02 0.0049 19.2 4.8 9 31-39 88-96 (138)
143 3tlk_A Ferrienterobactin-bindi 23.0 1.2E+02 0.0042 23.3 5.0 34 28-62 113-148 (326)
144 3hh1_A Tetrapyrrole methylase 23.0 1.5E+02 0.0053 19.0 4.8 32 30-61 79-116 (117)
145 3cz5_A Two-component response 23.0 1.6E+02 0.0056 19.1 5.8 43 22-64 43-90 (153)
146 3bbl_A Regulatory protein of L 22.4 2.4E+02 0.0082 20.8 6.7 39 22-60 56-94 (287)
147 2i4r_A V-type ATP synthase sub 22.3 62 0.0021 20.7 2.6 44 20-63 43-90 (102)
148 3d8u_A PURR transcriptional re 22.2 1.3E+02 0.0045 22.0 4.9 34 27-60 56-89 (275)
149 1l2l_A ADP-dependent glucokina 21.9 56 0.0019 27.3 2.8 35 2-38 200-236 (457)
150 3fdx_A Putative filament prote 21.8 1.5E+02 0.0051 19.1 4.7 30 32-63 86-115 (143)
151 3h5t_A Transcriptional regulat 21.7 2.5E+02 0.0086 21.7 6.7 41 20-60 118-158 (366)
152 3k9c_A Transcriptional regulat 21.3 2.5E+02 0.0087 20.7 6.8 39 22-61 58-96 (289)
153 1eo1_A Hypothetical protein MT 21.3 1.1E+02 0.0039 19.8 3.9 35 22-58 57-91 (124)
154 3hgm_A Universal stress protei 20.2 1.6E+02 0.0056 19.0 4.6 32 32-65 90-121 (147)
155 3e61_A Putative transcriptiona 20.2 82 0.0028 23.3 3.3 37 23-61 57-94 (277)
156 3kjx_A Transcriptional regulat 20.0 1.8E+02 0.0063 22.3 5.5 34 26-59 120-153 (344)
157 2obb_A Hypothetical protein; s 20.0 1.5E+02 0.005 20.2 4.2 38 26-63 36-75 (142)
No 1
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=100.00 E-value=7.7e-35 Score=220.33 Aligned_cols=182 Identities=81% Similarity=1.308 Sum_probs=152.7
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCCCCCCCcceEEEeCCE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFDEGTSYPEKKVVTVGQF 80 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~~~~~~ 80 (224)
|||+++||+|++.....+.+.+.+.++..++|+|+++||+++.++++.|+++..|+++|+||||....+|.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~~~~~~l~~~~~~~~~v~GNhD~~~~lp~--------- 81 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPE--------- 81 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSHHHHHHHHHHCSEEEECCCTTCCCTTSCS---------
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCHHHHHHHHhcCCCEEEEcCCcCccccCCc---------
Confidence 89999999998654334556777777667899999999999999999999987799999999998643322
Q ss_pred EEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEECCCCC
Q psy10859 81 RIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHK 160 (224)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~GH~H~ 160 (224)
......++.+|+++|+++..++.+++.+..+++..+++++++||+|.
T Consensus 82 ---------------------------------~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~ 128 (192)
T 1z2w_A 82 ---------------------------------QKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHK 128 (192)
T ss_dssp ---------------------------------EEEEEETTEEEEEECSCCCCBTTCHHHHHHHHHHHSSSEEECCSSCC
T ss_pred ---------------------------------ceEEEECCEEEEEECCCcCCCCCCHHHHHHHHHhcCCCEEEECCcCc
Confidence 22334466778889988877777777777777778999999999999
Q ss_pred CceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeecCceeEEEEeeccC
Q psy10859 161 FEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKKS 224 (224)
Q Consensus 161 ~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (224)
+.....++++++||||++.++.|++....++|+++++++++++++++++..+++.+++++|+|.
T Consensus 129 ~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 192 (192)
T 1z2w_A 129 FEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 192 (192)
T ss_dssp CEEEEETTEEEEECCCTTCCCCSSCSCCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECC
T ss_pred CccEeECCEEEEECCcccccCCCCCcCCCCcEEEEEEECCEEEEEEEEccCCEEEEEEEEEccC
Confidence 9988889999999999987655656667899999999999999999999999999999999874
No 2
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=100.00 E-value=1.9e-34 Score=221.76 Aligned_cols=190 Identities=44% Similarity=0.855 Sum_probs=157.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCCCCCCCcceEEEeCCE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFDEGTSYPEKKVVTVGQF 80 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~~~~~~ 80 (224)
|||+++||+|++.....+.+.+.++++..++|+|+++||+++.++++.|++++.|+++|+||||.......
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~~~l~~l~~~~~~v~~V~GNHD~~~~~~~--------- 96 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQEYVEMLKNITKNVYIVSGDLDSAIFNPD--------- 96 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCHHHHHHHHHHCSCEEECCCTTCCSCCBCC---------
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHHHcCCCEEEecCCCcCcccccC---------
Confidence 69999999998654334556677766667899999999999999999999987799999999998641110
Q ss_pred EEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEECCCCC
Q psy10859 81 RIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHK 160 (224)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~GH~H~ 160 (224)
++ |+ ..+|.......++.+|+++|++|..++.+++.+..+++..+++++++||+|.
T Consensus 97 ---------------~~---~~------~~lp~~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~ 152 (215)
T 2a22_A 97 ---------------PE---SN------GVFPEYVVVQIGEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHK 152 (215)
T ss_dssp ---------------GG---GT------BCCCSEEEEEETTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCC
T ss_pred ---------------hh---hH------hhCCceEEEecCCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCC
Confidence 00 11 2455555666788999999999988877788887777778999999999999
Q ss_pred CceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeecCceeEEEEeecc
Q psy10859 161 FEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDYKK 223 (224)
Q Consensus 161 ~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (224)
+.....++++++||||++.++.|++....++|+++++++++++++++++.++++++++++|+|
T Consensus 153 ~~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 153 LRVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp CEEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEeCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 998888999999999999765566667789999999999999999999999999999999987
No 3
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.96 E-value=6.7e-29 Score=185.16 Aligned_cols=168 Identities=19% Similarity=0.250 Sum_probs=124.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCCCCCCCcceEEEeCCE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFDEGTSYPEKKVVTVGQF 80 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~~~~~~ 80 (224)
||++++||+|++.. .+ +++.+.++. ++|.|+++||+.. +. ++.+..|+++|+||||....+|..
T Consensus 7 m~i~~isD~H~~~~--~~-~~~~~~~~~-~~d~i~~~GD~~~-~~---l~~l~~~~~~v~GNhD~~~~~p~~-------- 70 (176)
T 3ck2_A 7 QTIIVMSDSHGDSL--IV-EEVRDRYVG-KVDAVFHNGDSEL-RP---DSPLWEGIRVVKGNMDFYAGYPER-------- 70 (176)
T ss_dssp EEEEEECCCTTCHH--HH-HHHHHHHTT-TSSEEEECSCCCS-CT---TCGGGTTEEECCCTTCCSTTCCSE--------
T ss_pred cEEEEEecCCCCHH--HH-HHHHHHhhc-CCCEEEECCCCch-HH---HHhhhCCeEEecCcccchhcCCcE--------
Confidence 69999999997421 11 233333333 8999999999843 22 333334899999999986544432
Q ss_pred EEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEECCCCC
Q psy10859 81 RIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHK 160 (224)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~GH~H~ 160 (224)
.....++.+++++|++|..+..+.+.+.++++..+++++++||+|.
T Consensus 71 ----------------------------------~~~~~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~ 116 (176)
T 3ck2_A 71 ----------------------------------LVTELGSTKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHV 116 (176)
T ss_dssp ----------------------------------EEEEETTEEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCC
T ss_pred ----------------------------------EEEEECCeEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCC
Confidence 2233456678888887766555667777777788999999999999
Q ss_pred CceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeecCceeEEEEee
Q psy10859 161 FEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVERIDY 221 (224)
Q Consensus 161 ~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (224)
+.....++++++||||++. |++....++|+++++++++++++++++.+..+.....++
T Consensus 117 ~~~~~~~~~~~inpGs~~~---~~~~~~~~~y~il~~~~~~~~v~~~~~~~~~~~~~~~~~ 174 (176)
T 3ck2_A 117 PSAWLEGKILFLNPGSISQ---PRGTIRECLYARVEIDDSYFKVDFLTRDHEVYPGLSKEF 174 (176)
T ss_dssp EEEEEETTEEEEEECCSSS---CCTTCCSCCEEEEEECSSEEEEEEECTTSCBCTTCCEEE
T ss_pred CCcEEECCEEEEECCCCCc---CCCCCCCCeEEEEEEcCCEEEEEEEEECCEEcchhhccc
Confidence 9988889999999999995 444444589999999999999999999888777555444
No 4
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.96 E-value=4.8e-28 Score=180.54 Aligned_cols=156 Identities=24% Similarity=0.408 Sum_probs=118.2
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCCCCCCCcceEEEeCCE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFDEGTSYPEKKVVTVGQF 80 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~~~~~~ 80 (224)
|||+++||+|+..+...+.+.+.++. .++|.|+++||+++.++++.|+++..|+++|+||||...
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~--~~~D~ii~~GD~~~~~~~~~l~~~~~~v~~V~GNhD~~~------------- 87 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL--KEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNMDYPD------------- 87 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG--GGCSEEEESSCBSCHHHHHHHHHHTSSEEECCCSSSCGG-------------
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh--cCCCEEEECCCCCCHHHHHHHHhcCCCEEEEECCCCcHH-------------
Confidence 69999999996333335555565553 689999999999999999999988779999999999741
Q ss_pred EEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEECCCCC
Q psy10859 81 RIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHK 160 (224)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~GH~H~ 160 (224)
| + ..+|.......++.+++++|+++.. ...++.+.+.+. .+++++++||+|.
T Consensus 88 ------------~--------~------~~lp~~~~~~~~g~~i~l~HG~~~~-~~~~~~~~~~~~-~~~d~vi~GHtH~ 139 (178)
T 2kkn_A 88 ------------V--------K------EHLPFSKVLLVEGVTIGMCHGWGAP-WDLKDRLLKVFN-EKPQVILFGHTHE 139 (178)
T ss_dssp ------------G--------G------GTSCSCEEEEETTEEEEECCSCCCH-HHHHHHHHHHSS-SCCSEEECCSCSS
T ss_pred ------------H--------H------hhCCcceEEEECCEEEEEECCCCCC-CCHHHHHHHHhc-cCCCEEEECccCC
Confidence 0 0 1234444556677788888876521 111122222333 6899999999999
Q ss_pred CceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEe
Q psy10859 161 FEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQL 209 (224)
Q Consensus 161 ~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 209 (224)
+.....++++++||||++. ++|+++++++++++++++++
T Consensus 140 ~~~~~~~~~~~iNpGS~~~----------~sy~il~~~~~~~~~~~~~l 178 (178)
T 2kkn_A 140 PEDTVKAGVRFLNPGSLAE----------GSYAVLELDGGEVRFELKTL 178 (178)
T ss_dssp CCEEEETTEEEECCCCTTT----------TEEEEEEEETTEEEEEEEEC
T ss_pred CCeEEeCCEEEEECCCCCC----------CeEEEEEECCCEEEEEEEeC
Confidence 9988889999999999982 89999999999999988864
No 5
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.95 E-value=1.2e-26 Score=188.78 Aligned_cols=204 Identities=19% Similarity=0.149 Sum_probs=145.1
Q ss_pred CeEEEEeeccCCCCCCC------ChHHHH---HhhcC--CCccEEEEcCCCCC-------hHHHHHHHh----cCCcEEE
Q psy10859 1 MLVLVLGDLHIPHRTSG------LPAKFK---KLLVP--GRIQHILCTGNLVT-------KETFDYLKT----LASDVHV 58 (224)
Q Consensus 1 mki~~isDiH~~~~~~~------~~~~l~---~~~~~--~~~D~vi~~GDl~~-------~~~~~~l~~----l~~~v~~ 58 (224)
|||+++||+|+...... ....+. +.+++ .++|+|+++||+++ ....+.++. ++.|+++
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~ 105 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVW 105 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEE
Confidence 89999999997533211 112233 33333 78999999999998 133344443 3789999
Q ss_pred ecCCCCCCC------------CCCcceEEEeCCEEEEeeecCcc---cCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeE
Q psy10859 59 VRGDFDEGT------------SYPEKKVVTVGQFRIGLCHGHDI---IPWGDPEALALLQRQLDGTSYPEKKVVTVGQFR 123 (224)
Q Consensus 59 v~GNHD~~~------------~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 123 (224)
++||||... ..+....+..++++++++++... ..+...++++|+++.|... .....
T Consensus 106 v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~~---------~~~~~ 176 (330)
T 3ib7_A 106 VMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATP---------APDGT 176 (330)
T ss_dssp CCCTTSCHHHHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTTSC---------CTTCE
T ss_pred eCCCCCCHHHHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHHhc---------ccCCe
Confidence 999999742 11233578889999887765321 2234677899999877321 12337
Q ss_pred EEeeccCCCCCC---------CCHHHHHHHhhhcCCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCC-------CC
Q psy10859 124 IGLCHGHDIIPW---------GDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLE-------PK 187 (224)
Q Consensus 124 i~~~H~~~~~~~---------~~~~~l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~-------~~ 187 (224)
|+++|++|.... .+.+.+.++++..+++++++||+|.+.....+++.++++||.+..+.+.. ..
T Consensus 177 iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~ 256 (330)
T 3ib7_A 177 ILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRD 256 (330)
T ss_dssp EEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCCEES
T ss_pred EEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCcceeccC
Confidence 899998875431 24566777888889999999999999998999999999999985433221 23
Q ss_pred CCCeEEEEEEeCCeEEEEEEEeecCc
Q psy10859 188 VNPSFVLMDIQSSNVVTYVYQLIADE 213 (224)
Q Consensus 188 ~~~~~~~i~~~~~~~~~~~~~~~~~~ 213 (224)
..++|++++++++++.++++++...+
T Consensus 257 ~~~gy~iv~i~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 257 GAQGCNLVHVYPDTVVHSVIPLGGGE 282 (330)
T ss_dssp CSCEEEEEEECSSCEEEEEEECSCCC
T ss_pred CCCceEEEEEECCCeEEEEeccCCCC
Confidence 56789999999999999999986543
No 6
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.95 E-value=3.2e-27 Score=187.23 Aligned_cols=196 Identities=16% Similarity=0.211 Sum_probs=132.5
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCCCCCCCC-CcceE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDFDEGTSY-PEKKV 74 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNHD~~~~~-~~~~~ 74 (224)
.||++|||+|++.. .+. ++.+.++..++|.|+++||+++ .++++.|++++ ++++|+||||....- ....
T Consensus 12 ~~i~~iSDiHg~~~--~l~-~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~~~- 86 (270)
T 3qfm_A 12 TKIALLSDIHGNTT--ALE-AVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-ITARVLGNWEDSLWHGVRKE- 86 (270)
T ss_dssp EEEEEECCCTTCHH--HHH-HHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-EEEECCCHHHHHHHHHHTTC-
T ss_pred cEEEEEecCCCCHH--HHH-HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-CEEEEcCChHHHHHHhhccc-
Confidence 38999999998532 222 3333344568999999999998 58999999874 799999999976300 0000
Q ss_pred EEeCCE-EEEeee-cCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC-------CCCHHHHHHHh
Q psy10859 75 VTVGQF-RIGLCH-GHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP-------WGDPEALALLQ 145 (224)
Q Consensus 75 ~~~~~~-~~~~~~-g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~-------~~~~~~l~~~~ 145 (224)
...... ...+.. ..+.......+.++|++ .+|.......++.+++++|++|..+ ....+.+..++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~------~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~ 160 (270)
T 3qfm_A 87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLH------NQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLV 160 (270)
T ss_dssp SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHH------SCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTT
T ss_pred cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHH------hCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHh
Confidence 000000 000000 00001122334444554 6787777788899999999987543 23445677777
Q ss_pred hhcCCcEEEECCCCCCceEEE-cCEEEEcCCCCCCCCCCCCC------CCCCeEEEEEEeCCe-EEEEEEEee
Q psy10859 146 RQLDVDILISGHTHKFEAYEH-ENKFYINPGSATGAFNPLEP------KVNPSFVLMDIQSSN-VVTYVYQLI 210 (224)
Q Consensus 146 ~~~~~~~vi~GH~H~~~~~~~-~~~~~in~Gs~~~~~~~~~~------~~~~~~~~i~~~~~~-~~~~~~~~~ 210 (224)
+..+++++++||+|.+..... +++.++||||++. |+.. ...++|+++++++++ ++++++++.
T Consensus 161 ~~~~~d~~i~GHtH~~~~~~~~~~~~~iNpGSvg~---pr~~~~~~~~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 161 THPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQ---PFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp TTTTCSEEECCSSCSEEEEECTTSCEEEEECCSSS---CCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCEEEECCcCchHheeccCCEEEEECCCccC---CCCCCccccCCCCCEEEEEEecCCCceEEEEEEeC
Confidence 778999999999999988774 7999999999996 4433 347899999999876 578887764
No 7
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.94 E-value=4.3e-26 Score=171.75 Aligned_cols=160 Identities=18% Similarity=0.260 Sum_probs=113.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCCCCCCCcceEEEeCCE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFDEGTSYPEKKVVTVGQF 80 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~~~~~~ 80 (224)
|||+++||+|++.. .+ +++.+.++..++|+|+++||+++.++++.+++++.|+++|+||||.....
T Consensus 26 m~i~~iSD~Hg~~~--~l-~~~l~~~~~~~~D~ii~~GDl~~~~~~~~l~~l~~~~~~V~GNhD~~~~~----------- 91 (190)
T 1s3l_A 26 MKIGIMSDTHDHLP--NI-RKAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERCK----------- 91 (190)
T ss_dssp CEEEEECCCTTCHH--HH-HHHHHHHHHSCCSEEEECSCCCSTHHHHHGGGCSSEEEEECCTTCCCHHH-----------
T ss_pred eEEEEEeeCCCCHH--HH-HHHHHHHhhcCCCEEEECCCCCCHHHHHHHHhcCCCEEEEeCCCcchHHH-----------
Confidence 89999999996321 22 22333344568999999999999888999988777999999999985210
Q ss_pred EEEeeecCcccCCCCHHHHHHHHHhhcCCC-CCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhc-CCcEEEECCC
Q psy10859 81 RIGLCHGHDIIPWGDPEALALLQRQLDGTS-YPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQL-DVDILISGHT 158 (224)
Q Consensus 81 ~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~-~~~~vi~GH~ 158 (224)
..+|+... +... .+.......++.+|+++|+++.. +.+.+++. +++++++||+
T Consensus 92 -----------------~~~~~~~~-~~~~l~~~~~~~~~~~~~ill~Hg~~~~-------l~~~~~~~~~~d~vl~GHt 146 (190)
T 1s3l_A 92 -----------------LKEWLKDI-NEENIIDDFISVEIDDLKFFITHGHHQS-------VLEMAIKSGLYDVVIYGHT 146 (190)
T ss_dssp -----------------HHHHHHHH-CTTCEEESEEEEEETTEEEEEEESCCHH-------HHHHHHHHSCCSEEEEECS
T ss_pred -----------------HHHHhccc-ChhhhcccceEEeeCCcEEEEECCChHH-------HHHHHHhcCCCCEEEECCC
Confidence 00111110 0000 11123345678899999986532 33444454 8999999999
Q ss_pred CCCceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEE
Q psy10859 159 HKFEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVT 204 (224)
Q Consensus 159 H~~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 204 (224)
|.+.....++++++||||++. +...+++|+++++++++++.
T Consensus 147 H~~~~~~~~~~~~iNpGs~~~-----r~~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 147 HERVFEEVDDVLVINPGECCG-----YLTGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp SCCEEEEETTEEEEECCCSSC-----TTTSCCEEEEEETTTTEEEE
T ss_pred CCcceEEECCEEEEECCcccc-----cCCCCCEEEEEEcCCCcEEE
Confidence 999999899999999999984 23346999999999886543
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.94 E-value=2.6e-25 Score=176.37 Aligned_cols=201 Identities=16% Similarity=0.176 Sum_probs=138.8
Q ss_pred CeEEEEeeccCCCCCC------CChHHHHHh---hcC--CCccEEEEcCCCCC-------hHHHHHHHhcCCcEEEecCC
Q psy10859 1 MLVLVLGDLHIPHRTS------GLPAKFKKL---LVP--GRIQHILCTGNLVT-------KETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 1 mki~~isDiH~~~~~~------~~~~~l~~~---~~~--~~~D~vi~~GDl~~-------~~~~~~l~~l~~~v~~v~GN 62 (224)
|||+++||+|+..... ...+.+.++ +++ .++|+|+++||+++ ..+.+.+++++.|+++++||
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~p~~~v~GN 80 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQILGSLNYPLYLIPGN 80 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHHTTCSSCEEEECCT
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 8999999999864211 111233333 233 36899999999997 24556777777899999999
Q ss_pred CCCCCC--------C--------CcceEEEeCCEEEEeeecCcc---cCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeE
Q psy10859 63 FDEGTS--------Y--------PEKKVVTVGQFRIGLCHGHDI---IPWGDPEALALLQRQLDGTSYPEKKVVTVGQFR 123 (224)
Q Consensus 63 HD~~~~--------~--------~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 123 (224)
||.... + +....+..++++++++..... ......++++|+++.|.. ..+...
T Consensus 81 HD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~---------~~~~~~ 151 (274)
T 3d03_A 81 HDDKALFLEYLQPLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFE---------GGDKPA 151 (274)
T ss_dssp TSCHHHHHHHHGGGSGGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHH---------HTTSCE
T ss_pred CCCHHHHHHHhhhhhcCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHh---------CCCCCE
Confidence 998531 1 112456667788776654211 123356788899876631 124678
Q ss_pred EEeeccCCCCCC---------CCHHHHHHHhhhc-CCcEEEECCCCCCceEEEcCE-EEEcCCCCCCCCCC------CCC
Q psy10859 124 IGLCHGHDIIPW---------GDPEALALLQRQL-DVDILISGHTHKFEAYEHENK-FYINPGSATGAFNP------LEP 186 (224)
Q Consensus 124 i~~~H~~~~~~~---------~~~~~l~~~~~~~-~~~~vi~GH~H~~~~~~~~~~-~~in~Gs~~~~~~~------~~~ 186 (224)
|+++|++|.... .+.+.+.++++++ +++++++||+|.+.....+++ .++|||+.+..... ...
T Consensus 152 iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~ 231 (274)
T 3d03_A 152 TIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTDPYYD 231 (274)
T ss_dssp EEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCSCEEB
T ss_pred EEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccccccc
Confidence 999998775421 2345666777777 899999999999988888884 77899887753211 112
Q ss_pred CCCCeEEEEEEeCCeEEEEEEEee
Q psy10859 187 KVNPSFVLMDIQSSNVVTYVYQLI 210 (224)
Q Consensus 187 ~~~~~~~~i~~~~~~~~~~~~~~~ 210 (224)
..+++|+++++++++++++++++.
T Consensus 232 ~~~~gy~i~~i~~~~~~~~~~~~~ 255 (274)
T 3d03_A 232 LSPASCLMHRQVGEQWVSYQHSLA 255 (274)
T ss_dssp CCCCEEEEEEEETTEEEEEEEECS
T ss_pred cCCCceEEEEEeCCcEEEEEEecC
Confidence 357899999999999999999885
No 9
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.94 E-value=4e-26 Score=179.35 Aligned_cols=194 Identities=19% Similarity=0.188 Sum_probs=125.8
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhc---CC--CccEEEEcCCCCC-----hHHHHHHHhcC--CcEEEecCCCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLV---PG--RIQHILCTGNLVT-----KETFDYLKTLA--SDVHVVRGDFDEGTS 68 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~---~~--~~D~vi~~GDl~~-----~~~~~~l~~l~--~~v~~v~GNHD~~~~ 68 (224)
|||+++||+|++.. .+. ++.+.++ .. ++|.|+++||+++ .++++.++++. .++++|+||||....
T Consensus 2 m~i~~isD~H~~~~--~l~-~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLP--ALT-AALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHH--HHH-HHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHH--HHH-HHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 89999999998432 222 2333333 44 7999999999997 47788888763 589999999997531
Q ss_pred C-CcceEEEeCCEEEEe---eec--CcccCC----CCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC----
Q psy10859 69 Y-PEKKVVTVGQFRIGL---CHG--HDIIPW----GDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP---- 134 (224)
Q Consensus 69 ~-~~~~~~~~~~~~~~~---~~g--~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~---- 134 (224)
. .... +...... ..+ .....| ...+.++|++ .+|.......++.+++++|++|..+
T Consensus 79 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~------~lp~~~~~~~~~~~i~~~H~~p~~~~~~~ 148 (252)
T 1nnw_A 79 MSDPHA----TDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLR------DLPIYLVDKIGGNEVFGVYGSPINPFDGE 148 (252)
T ss_dssp HSCTTC----SSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHH------TSCSCEEEEETTEEEEEESSCSSCTTTCC
T ss_pred cccccc----CCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHH------hCCceEEEeeCCcEEEEEcCCCCCCcccc
Confidence 0 0000 0000000 000 000001 0112233333 4565555666788999999888332
Q ss_pred ---CCCHHHHHHHhhhc-CCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEee
Q psy10859 135 ---WGDPEALALLQRQL-DVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLI 210 (224)
Q Consensus 135 ---~~~~~~l~~~~~~~-~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 210 (224)
..+.+.+.++++.. ++++++|||+|.+.....+++.++||||++. |++....++|+++++++..++.+.+..+
T Consensus 149 ~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~---~~~~~~~~~y~il~~~~~~v~~~~v~yd 225 (252)
T 1nnw_A 149 VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGF---PPGKEHKATFALVDVDTLKPKFIEVEYD 225 (252)
T ss_dssp CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSS---CSSSSCCEEEEEEETTTCCEEEEEECCC
T ss_pred cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccC---CCCCCCcceEEEEECCCCeEEEEEeCCC
Confidence 12335666777776 8999999999999998899999999999984 5555557899999998876665555443
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.93 E-value=9.1e-26 Score=174.27 Aligned_cols=184 Identities=15% Similarity=0.077 Sum_probs=117.8
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCCh--------HHHHHHHhcCCcEEEecCCCCCCCC----
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTK--------ETFDYLKTLASDVHVVRGDFDEGTS---- 68 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~--------~~~~~l~~l~~~v~~v~GNHD~~~~---- 68 (224)
|||+++||+|++.. . .+.+.+.+++.++|+|+++||+++. +.++.|++++.|+++|+||||....
T Consensus 6 mri~~iSD~H~~~~--~-~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~GNHD~~~~~~~~ 82 (228)
T 1uf3_A 6 RYILATSNPMGDLE--A-LEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82 (228)
T ss_dssp CEEEEEECCTTCHH--H-HHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEECCTTSCSHHHHHH
T ss_pred EEEEEEeeccCCHH--H-HHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEECCCCCchhHHHHH
Confidence 79999999998432 1 1233333444589999999999982 4667777777899999999998631
Q ss_pred --------CCc-----ceEEEeC-CEEEEeeecCcccCC-CCHH-------H-HHHHHHhhcCCCCCCceeeeeCCeEEE
Q psy10859 69 --------YPE-----KKVVTVG-QFRIGLCHGHDIIPW-GDPE-------A-LALLQRQLDGTSYPEKKVVTVGQFRIG 125 (224)
Q Consensus 69 --------~~~-----~~~~~~~-~~~~~~~~g~~~~~~-~~~~-------~-~~~l~~~l~~~~~~~~~~~~~~~~~i~ 125 (224)
++. .....++ ++++..+.+....++ ...+ + ..+..+.|. ++ ..+..|+
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~-------~~~~~il 153 (228)
T 1uf3_A 83 EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALW--EL-------KDYPKIF 153 (228)
T ss_dssp HHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGG--GS-------CSCCEEE
T ss_pred hhhhhhccCcceEEcccceEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHH--hC-------CCCCeEE
Confidence 011 1123444 666654432111111 0111 0 011111111 11 1347899
Q ss_pred eeccCCCCC---CCCHHHHHHHhhhcCCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeE
Q psy10859 126 LCHGHDIIP---WGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNV 202 (224)
Q Consensus 126 ~~H~~~~~~---~~~~~~l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~ 202 (224)
++|++|... ..+.+.+.++++..+++++++||+| +.....+++.++||||++ .++|+++++++ +
T Consensus 154 ~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~----------~~~~~i~~~~~--~ 220 (228)
T 1uf3_A 154 LFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS----------EGEYSLLDLRA--R 220 (228)
T ss_dssp EESSCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG----------GTEEEEEETTT--T
T ss_pred EEccCcccCCccccCHHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC----------CCceEEEEecc--e
Confidence 999887542 3345566677777899999999999 656667899999999987 46999999987 4
Q ss_pred EEEEEEe
Q psy10859 203 VTYVYQL 209 (224)
Q Consensus 203 ~~~~~~~ 209 (224)
+++++++
T Consensus 221 ~~~~~~v 227 (228)
T 1uf3_A 221 KLETGNV 227 (228)
T ss_dssp EEEEEEC
T ss_pred Eeeeccc
Confidence 5565553
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.93 E-value=3.3e-25 Score=174.65 Aligned_cols=185 Identities=15% Similarity=0.144 Sum_probs=116.7
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCCh--H-----------------------------H---H
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVTK--E-----------------------------T---F 46 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~~--~-----------------------------~---~ 46 (224)
|||+++||+|++.. .+ +.+.+.++..++|+|+++||+++. . . +
T Consensus 6 mri~~iSDlH~~~~--~~-~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 6 RKVLAIKNFKERFD--LL-PKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CEEEEEECCTTCGG--GH-HHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCChH--HH-HHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 79999999998542 22 334444445689999999999982 1 2 2
Q ss_pred HHHHhcCCcEEEecCCCCCCCCC------------C-----cceE-EEeCCEEEEeeecCcccCCCCHHHH----HHHHH
Q psy10859 47 DYLKTLASDVHVVRGDFDEGTSY------------P-----EKKV-VTVGQFRIGLCHGHDIIPWGDPEAL----ALLQR 104 (224)
Q Consensus 47 ~~l~~l~~~v~~v~GNHD~~~~~------------~-----~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~----~~l~~ 104 (224)
+.|++++.|+++|+||||..... + .... +.+++.++..+.+....+..+.+.. .|+..
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 162 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVE 162 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHHHHHHHHHTTTTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEHHHHH
T ss_pred HHHHhcCCcEEEEcCCCCchhhhhHHHHhhhccCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcchhhHH
Confidence 33444467999999999986311 0 0123 5667777665433111010011100 12211
Q ss_pred -hhcCCCCCCceeeeeCCeEEEeeccCCCCC----------CCCHHHHHHHhhhcCCcEEEECCCCCCceEEEcCEEEEc
Q psy10859 105 -QLDGTSYPEKKVVTVGQFRIGLCHGHDIIP----------WGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYIN 173 (224)
Q Consensus 105 -~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~----------~~~~~~l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in 173 (224)
.| .......+..+|+++|++|... ..+.+.+.++++..++++++|||+| +.....+++.++|
T Consensus 163 ~~l------~~l~~~~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in 235 (260)
T 2yvt_A 163 YIL------KFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVN 235 (260)
T ss_dssp HHG------GGGGGSCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEE
T ss_pred HHH------HHHHhcCCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEe
Confidence 11 0000111356799999887532 1234556677777899999999999 7667779999999
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEE
Q psy10859 174 PGSATGAFNPLEPKVNPSFVLMDIQSSNVVTY 205 (224)
Q Consensus 174 ~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 205 (224)
|||++. ++|+++++++++++.+
T Consensus 236 ~Gs~~~----------g~~~ii~~~~~~~~~~ 257 (260)
T 2yvt_A 236 PGEFEE----------GRYAFLDLTQHKIKLE 257 (260)
T ss_dssp CCBGGG----------TEEEEEETTTTEEEEE
T ss_pred CCCCCC----------CceEEEEEcCCEEEee
Confidence 999882 3999999998877544
No 12
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.93 E-value=2.3e-26 Score=180.25 Aligned_cols=188 Identities=19% Similarity=0.210 Sum_probs=121.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCCCCCCCCCcceEE
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDFDEGTSYPEKKVV 75 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNHD~~~~~~~~~~~ 75 (224)
||++++||+|++.. .+. ++.+.+. ++|.++++||+++ .++++.++++. .+++|+||||..........
T Consensus 4 mri~~isDiHg~~~--~l~-~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-~~~~v~GNhD~~~~~~~~~~- 76 (246)
T 3rqz_A 4 MRILIISDVHANLV--ALE-AVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-PNISVIGNHDWACIGRLSLD- 76 (246)
T ss_dssp CCEEEECCCTTCHH--HHH-HHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-SSEECCCHHHHHHTCCCCCC-
T ss_pred cEEEEEeecCCCHH--HHH-HHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-CCEEEeCchHHHHhccCCcc-
Confidence 89999999997432 222 2333333 8999999999998 57888888875 47999999997631110000
Q ss_pred EeCCEEEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCC----CCHHHHHHHhhhcCCc
Q psy10859 76 TVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPW----GDPEALALLQRQLDVD 151 (224)
Q Consensus 76 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~----~~~~~l~~~~~~~~~~ 151 (224)
...... .....+.......+.+.|++. +|.... . ..++++|++|..+. .....+.+.++..+++
T Consensus 77 ~~~~~~--~~~~~~~~~~l~~~~~~~L~~------lp~~~~--~--~~i~~~Hg~p~~~~~~~~~~~~~~~~~l~~~~~~ 144 (246)
T 3rqz_A 77 EFNPVA--RFASYWTTMQLQAEHLQYLES------LPNRMI--D--GDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTP 144 (246)
T ss_dssp --CGGG--GCHHHHHHHHCCHHHHHHHHH------CCSEEE--E--TTEEEESSCSSSTTTCCCCSHHHHHHHGGGCCSS
T ss_pred ccCHHH--HHHHHHHHHHcCHHHHHHHHh------CCcEEE--E--CCEEEEECCcCCccccccCChHHHHHHHhccCCC
Confidence 000000 000000001123344555542 443322 1 26899999886542 2345666777888999
Q ss_pred EEEECCCCCCceEE---------------------EcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEee
Q psy10859 152 ILISGHTHKFEAYE---------------------HENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLI 210 (224)
Q Consensus 152 ~vi~GH~H~~~~~~---------------------~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 210 (224)
+++|||+|.+.... .++.+++||||++ .|++..+.++|+++|.++++++.+.++.+
T Consensus 145 l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG---~Prdg~p~A~Y~i~d~~~~~v~~~rv~Yd 221 (246)
T 3rqz_A 145 LCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVG---QPRDGDPRASYAIFEPDAQRVTFHRVEYR 221 (246)
T ss_dssp EEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSS---CCCSSCCSEEEEEEEGGGTEEEEEEECCC
T ss_pred EEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccC---CCCCcCCcceEEEEECCCCEEEEEEeCCC
Confidence 99999999998766 2368999999999 47777778899999999887665555543
No 13
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.92 E-value=7.8e-24 Score=161.65 Aligned_cols=165 Identities=24% Similarity=0.328 Sum_probs=112.4
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-------------hHHHHHHHhcCCcEEEecCCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-------------KETFDYLKTLASDVHVVRGDFDEGT 67 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------------~~~~~~l~~l~~~v~~v~GNHD~~~ 67 (224)
||++++||+|++.. .+ +++.+.++..++|.|+++||+++ .++++.|++++.++++|+||||...
T Consensus 26 mki~~iSD~H~~~~--~l-~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~~~v~~V~GNHD~~~ 102 (208)
T 1su1_A 26 MKLMFASDIHGSLP--AT-ERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVAHKVIAVRGNCDSEV 102 (208)
T ss_dssp CEEEEECCCTTBHH--HH-HHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTGGGEEECCCTTCCHH
T ss_pred EEEEEEEcCCCCHH--HH-HHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcCCceEEEECCCchHH
Confidence 79999999998431 11 23333344467999999999996 3567788887679999999999852
Q ss_pred CCCcceEEEeCCEEEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhh
Q psy10859 68 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQ 147 (224)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~ 147 (224)
. .. . ..+ ...+.......++.+++++|+++..+.. +..+
T Consensus 103 ~--~~------------~-----~~~---------------~~~~~~~~~~~~g~~i~l~Hg~~~~~~~----l~~~--- 141 (208)
T 1su1_A 103 D--QM------------L-----LHF---------------PITAPWQQVLLEKQRLFLTHGHLFGPEN----LPAL--- 141 (208)
T ss_dssp H--HH------------H-----SSS---------------CCCCSEEEEECSSCEEEEECSSSSBTTB----CCCC---
T ss_pred H--Hh------------h-----hhc---------------cccCceEEEEECCcEEEEECCCCCCcch----hhhh---
Confidence 0 00 0 000 0111122344567889999988754311 1011
Q ss_pred cCCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeecCceeEE
Q psy10859 148 LDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIADEVTVE 217 (224)
Q Consensus 148 ~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
...+++++||+|.+.....+++.++||||++. |+. +.+++|++++. + ++++++++++++...
T Consensus 142 ~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~---pr~-~~~~sy~il~~--~--~~~~~~~~~~~~~~~ 203 (208)
T 1su1_A 142 NQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSI---PKG-GNPASYGMLDN--D--VLSVIALNDQSIIAQ 203 (208)
T ss_dssp CTTCEEECCSSCCCEEEEETTEEEEECCCSSC---CCT-TCCCEEEEEET--T--EEEEEETTTCCEEEE
T ss_pred cCCCEEEECCcccCccEEeCCEEEEECCCCcC---CCC-CCCCEEEEEEC--C--eEEEEEeCCCEEEEE
Confidence 24599999999999988889999999999995 443 34689999995 3 567888877655443
No 14
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.91 E-value=4e-23 Score=166.99 Aligned_cols=197 Identities=16% Similarity=0.108 Sum_probs=133.0
Q ss_pred CeEEEEeeccCCCCCCC----------C---hHHHHHh---hcCCCccEEEEcCCCCCh-------------HHHHHHHh
Q psy10859 1 MLVLVLGDLHIPHRTSG----------L---PAKFKKL---LVPGRIQHILCTGNLVTK-------------ETFDYLKT 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~----------~---~~~l~~~---~~~~~~D~vi~~GDl~~~-------------~~~~~l~~ 51 (224)
|||+++||+|....... . ...+.++ +++.++|+|+++||+++. .+.+.+++
T Consensus 6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~~ 85 (322)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDA 85 (322)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHHT
T ss_pred eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHHh
Confidence 79999999998653211 1 1223333 335789999999999981 14455666
Q ss_pred cCCcEEEecCCCCCCC--------C---------------CC----cceEEEe-CCEEEEeeecCccc------------
Q psy10859 52 LASDVHVVRGDFDEGT--------S---------------YP----EKKVVTV-GQFRIGLCHGHDII------------ 91 (224)
Q Consensus 52 l~~~v~~v~GNHD~~~--------~---------------~~----~~~~~~~-~~~~~~~~~g~~~~------------ 91 (224)
++.|+++++||||... . ++ ..+.+.. ++.+++++++....
T Consensus 86 ~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~ 165 (322)
T 2nxf_A 86 CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHT 165 (322)
T ss_dssp TCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHH
T ss_pred cCCcEEEecCCCCcccCCHHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceecccccCCCChhhH
Confidence 6789999999999831 0 21 2245665 88888877653310
Q ss_pred ---------------------------------CCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCC--
Q psy10859 92 ---------------------------------PWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWG-- 136 (224)
Q Consensus 92 ---------------------------------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~-- 136 (224)
.....++++|+++.|.. ....+...|+++|.+|.....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~-------~~~~~~~~iv~~H~p~~~~~~~~ 238 (322)
T 2nxf_A 166 HSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTL-------SDHKQERVLIFSHLPVHPCAADP 238 (322)
T ss_dssp HHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHH-------HHHHTCEEEEEESSCCCTTSSCG
T ss_pred HHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHH-------HHhcCCcEEEEEccCCCCCCCCc
Confidence 01135567788776521 011145678999977643221
Q ss_pred -----CHHHHHHHhhhc-CCcEEEECCCCCCceEE-EcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEe
Q psy10859 137 -----DPEALALLQRQL-DVDILISGHTHKFEAYE-HENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQL 209 (224)
Q Consensus 137 -----~~~~l~~~~~~~-~~~~vi~GH~H~~~~~~-~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 209 (224)
+.+.+..+++++ +++++++||+|...... .+++.++++|++... ....++|++++++++++.++.+..
T Consensus 239 ~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~-----~~~~~~y~~v~~~~~~~~~~~~~~ 313 (322)
T 2nxf_A 239 ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIET-----PPHSHAFATAYLYEDRMVMKGRGR 313 (322)
T ss_dssp GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGC-----CTTSCEEEEEEECSSEEEEEEEET
T ss_pred cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhC-----CCCCCcEEEEEEECCeEEEEeccc
Confidence 456677777776 78999999999998887 788999988887531 235689999999999988776644
No 15
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.90 E-value=1e-22 Score=172.27 Aligned_cols=196 Identities=13% Similarity=0.071 Sum_probs=129.8
Q ss_pred CeEEEEeeccCCCCCC-----------------C---ChHH---HHHhhcCCCccEEEEcCCCCC-------hHHHHHHH
Q psy10859 1 MLVLVLGDLHIPHRTS-----------------G---LPAK---FKKLLVPGRIQHILCTGNLVT-------KETFDYLK 50 (224)
Q Consensus 1 mki~~isDiH~~~~~~-----------------~---~~~~---l~~~~~~~~~D~vi~~GDl~~-------~~~~~~l~ 50 (224)
|||+++||+|+..... . -.+. +.+.++..++|+|+++||+++ ..+.+.++
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~ 119 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKLT 119 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHH
Confidence 6899999999853210 0 0122 333334568999999999997 23344555
Q ss_pred hc---CCcEEEecCCCCCCCCCCc--------------------------------------ce-EEEeCCEEEEeeecC
Q psy10859 51 TL---ASDVHVVRGDFDEGTSYPE--------------------------------------KK-VVTVGQFRIGLCHGH 88 (224)
Q Consensus 51 ~l---~~~v~~v~GNHD~~~~~~~--------------------------------------~~-~~~~~~~~~~~~~g~ 88 (224)
.+ +.|+++++||||....+.. .+ ....++.+++++...
T Consensus 120 ~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~Lds~ 199 (443)
T 2xmo_A 120 QVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTA 199 (443)
T ss_dssp HHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEECCCB
T ss_pred HHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEEeeCC
Confidence 54 7899999999998642110 01 112456676655432
Q ss_pred cc-----------cCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC---------CCCHHHHHHHhhhc
Q psy10859 89 DI-----------IPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP---------WGDPEALALLQRQL 148 (224)
Q Consensus 89 ~~-----------~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~---------~~~~~~l~~~~~~~ 148 (224)
.. .+....++++|+++.+.. ....+...|+++|++|... ..+.+.+.++++++
T Consensus 200 ~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~-------~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~ 272 (443)
T 2xmo_A 200 IYKTNMQQGNPTTEGGLTAGTLDWIKESSAL-------AKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEG 272 (443)
T ss_dssp CCTTHHHHTSCCCCBCCCHHHHHHHHHHHHH-------HHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHT
T ss_pred CcCcccccCCCCcCCccCHHHHHHHHHHHHH-------HHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHc
Confidence 11 123456778898876621 1112456799999877532 12456677788888
Q ss_pred CCcEEEECCCCCCceEEEc-----CEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCe--EEEEEEEeec
Q psy10859 149 DVDILISGHTHKFEAYEHE-----NKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSN--VVTYVYQLIA 211 (224)
Q Consensus 149 ~~~~vi~GH~H~~~~~~~~-----~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~ 211 (224)
+++++++||+|.+.....+ +.+.+++||++. .+++|+++++++++ ++++.+.++-
T Consensus 273 ~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~--------~p~~y~il~i~~~~~~~~~~~~~l~v 334 (443)
T 2xmo_A 273 AMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV--------FPHKYGNITYSAKNKNFTYQSQKLDM 334 (443)
T ss_dssp TCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS--------TTCEEEEEEEETTTTEEEEEEEECCH
T ss_pred CCeEEEECCcccCchhhcccCCCCceEEEEcCcccc--------CCCCeEEEEEeCCCceEEEEEEEEeH
Confidence 9999999999999876542 378889999874 25899999999876 7788877753
No 16
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.89 E-value=5.5e-22 Score=165.76 Aligned_cols=214 Identities=14% Similarity=0.117 Sum_probs=134.3
Q ss_pred CeEEEEeeccCCCCCCC------Ch---HHHHHhhcCCCccEEEEcCCCCC---------hHHHHHHHh-----------
Q psy10859 1 MLVLVLGDLHIPHRTSG------LP---AKFKKLLVPGRIQHILCTGNLVT---------KETFDYLKT----------- 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~------~~---~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~----------- 51 (224)
|||+++||+|++..... .. +.+.+.+.+.++|+|+++|||+| ..+++.|++
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~~~e 156 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELE 156 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCCCCE
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcchhe
Confidence 79999999998653211 11 23444445789999999999999 234444443
Q ss_pred -------------------------cCCcEEEecCCCCCCCCC------------------Cc----------ceEEEeC
Q psy10859 52 -------------------------LASDVHVVRGDFDEGTSY------------------PE----------KKVVTVG 78 (224)
Q Consensus 52 -------------------------l~~~v~~v~GNHD~~~~~------------------~~----------~~~~~~~ 78 (224)
.++||++|+||||..... .. ...+..+
T Consensus 157 ~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~d~i~~~pv~l~kg 236 (472)
T 4fbk_A 157 LLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKG 236 (472)
T ss_dssp EEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCSSSEEECCEEEEET
T ss_pred ecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccCCceeEEEEEEEeC
Confidence 268999999999987411 00 0112223
Q ss_pred CEEEEeeecCcccCCCCHHHH-HHHHHhhcCCCCCCcee--eeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q psy10859 79 QFRIGLCHGHDIIPWGDPEAL-ALLQRQLDGTSYPEKKV--VTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILIS 155 (224)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~--~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~ 155 (224)
+..+ .++| +++...+.+ ..+.+. ....... ...+.+.|++.|+....... ...+-.-+...++|+|+.
T Consensus 237 ~~~v-alyG---l~y~~d~rl~r~~~e~----~v~~~~p~~~~~~~~nIlvlH~~~~~~~~-~~yipe~ll~~g~DyVal 307 (472)
T 4fbk_A 237 FTKL-ALYG---ISNVRDERLYHSFREN----KVKFLRPDLYRDEWFNLLTVHQNHSAHTP-TSYLPESFIQDFYDFVLW 307 (472)
T ss_dssp TEEE-EEEE---CCCCCHHHHHHHHHTT----CEEEEEESTTGGGEEEEEEEESCSCCSST-TSSCCGGGSCTTCSEEEE
T ss_pred CceE-EEEe---cCCCchhhhhhhhhhh----hhhhhCcccccCCceEEEEecCCccCCCc-cccCChhhhhcCCCEEEe
Confidence 3333 5566 566654432 222211 1111111 12345789999976532211 001101133568999999
Q ss_pred CCCCCCceEE----EcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeec-CceeEEEEeecc
Q psy10859 156 GHTHKFEAYE----HENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIA-DEVTVERIDYKK 223 (224)
Q Consensus 156 GH~H~~~~~~----~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (224)
||+|.+.... .++.+++||||+...-.+..+..+++|.+++++++.++++++.+.. .+|...++++..
T Consensus 308 GH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 308 GHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp ESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred cCcccceeeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEec
Confidence 9999998764 2578999999987421121233588999999999999999999986 679998888753
No 17
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.89 E-value=1.4e-22 Score=168.55 Aligned_cols=199 Identities=17% Similarity=0.127 Sum_probs=119.0
Q ss_pred CeEEEEeeccCCCCCCCC----------hHHHHHhhcCCCccEEEEcCCCCC---------hHHHHHHHhc---CCcEEE
Q psy10859 1 MLVLVLGDLHIPHRTSGL----------PAKFKKLLVPGRIQHILCTGNLVT---------KETFDYLKTL---ASDVHV 58 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~----------~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~l---~~~v~~ 58 (224)
|||+++||+|++...... .+.+.+.++..++|+|+++||+++ ..+.+.|+++ +.|+++
T Consensus 21 mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~pv~~ 100 (386)
T 3av0_A 21 MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYI 100 (386)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEE
Confidence 899999999986431111 122333345789999999999998 1245566665 689999
Q ss_pred ecCCCCCCCCCC---------cc-------eEEEeCCEEEEeeecCcccCCCCH----HHHHHHHHhhcCCCCCCceeee
Q psy10859 59 VRGDFDEGTSYP---------EK-------KVVTVGQFRIGLCHGHDIIPWGDP----EALALLQRQLDGTSYPEKKVVT 118 (224)
Q Consensus 59 v~GNHD~~~~~~---------~~-------~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~l~~~l~~~~~~~~~~~~ 118 (224)
|+||||...... .. .....++..+ .+.| .++..+ ...+++.. + +.. ..
T Consensus 101 v~GNHD~~~~~~~~~~~~~l~~~v~~l~~~~v~~~~~~~v-~i~g---l~~~~~~~~~~~~~~l~~-l-----~~~--~~ 168 (386)
T 3av0_A 101 VAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEI-FICG---TYYHKKSKREEMLDKLKN-F-----ESE--AK 168 (386)
T ss_dssp CCCGGGSCSSTTSCCGGGGGTTTCEECSEEEEEEETTEEE-EEEE---ECCCCSTTHHHHHHHHHH-H-----HHH--HH
T ss_pred EcCCCCCCccccccCHHHHHHHHeEEcCCCcEEEeCCCCE-EEEe---CCCCCHHHHHHHHHHHHH-h-----hhh--cc
Confidence 999999864221 00 0111112221 2233 233322 12222211 0 000 11
Q ss_pred eCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCCCC-----CCCeEE
Q psy10859 119 VGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPK-----VNPSFV 193 (224)
Q Consensus 119 ~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~~~-----~~~~~~ 193 (224)
.+..+|+++|+++.....+...+. +..-.+++++++||+|.+.....++..++||||+... +..+. ..++|.
T Consensus 169 ~~~~~Ill~H~~~~~~~~~~~~~~-~~~l~~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~--~~~e~~~~~~~~kg~~ 245 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIPLDYELE-HFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEII--YRNEYEDYKKEGKGFY 245 (386)
T ss_dssp TCSSEEEEECCCCTTTSSSSCSSC-GGGSCCCSEEEECSCCSCEEEECSSSEEEECCCSSCC--SGGGTHHHHHHCSEEE
T ss_pred cCCCEEEEECcCccccCCCCcccC-HHHhhhCCeEEccCCCCCccccCCCceEEECCccccc--CcchhccccCCCCEEE
Confidence 256789999987632111100010 0011249999999999996555578899999999742 22221 468999
Q ss_pred EEEEeC---CeEEEEEEEeecCce
Q psy10859 194 LMDIQS---SNVVTYVYQLIADEV 214 (224)
Q Consensus 194 ~i~~~~---~~~~~~~~~~~~~~~ 214 (224)
++++++ +.++++++++...++
T Consensus 246 lv~i~~~~~~~~~v~~i~l~~r~~ 269 (386)
T 3av0_A 246 LVDFSGNDLDISDIEKIDIECREF 269 (386)
T ss_dssp EEECCSSSCCGGGEEEEECCCCCE
T ss_pred EEEEecCcCCCceEEEEECCccee
Confidence 999998 778899999977776
No 18
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.89 E-value=1.9e-22 Score=167.32 Aligned_cols=214 Identities=14% Similarity=0.115 Sum_probs=132.2
Q ss_pred CeEEEEeeccCCCCCCC------Ch---HHHHHhhcCCCccEEEEcCCCCC---------hHHHHHHHh-----------
Q psy10859 1 MLVLVLGDLHIPHRTSG------LP---AKFKKLLVPGRIQHILCTGNLVT---------KETFDYLKT----------- 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~------~~---~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~----------- 51 (224)
|||+++||+|++..... .. +.+.+.+++.++|+|+++|||++ ..+++.|++
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~~~e 93 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELE 93 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCCCCE
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcccce
Confidence 79999999998653211 11 23344445789999999999999 233444433
Q ss_pred -------------------------cCCcEEEecCCCCCCCCC------------------Ccc----------eEEEeC
Q psy10859 52 -------------------------LASDVHVVRGDFDEGTSY------------------PEK----------KVVTVG 78 (224)
Q Consensus 52 -------------------------l~~~v~~v~GNHD~~~~~------------------~~~----------~~~~~~ 78 (224)
.++||++|.||||..... ... ..+..+
T Consensus 94 ~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~pv~l~~g 173 (417)
T 4fbw_A 94 LLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKG 173 (417)
T ss_dssp ECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEECCEEEEET
T ss_pred eccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEEeEEEEec
Confidence 268999999999986411 000 012223
Q ss_pred CEEEEeeecCcccCCCCHHHH-HHHHHhhcCCCCCCcee--eeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q psy10859 79 QFRIGLCHGHDIIPWGDPEAL-ALLQRQLDGTSYPEKKV--VTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILIS 155 (224)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~--~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~ 155 (224)
+.++ .++| +++...+.+ +...+. ....... ...+.+.|++.|+........ ..+-..+...++|++++
T Consensus 174 ~~~v-alyG---~~~~~d~rl~r~~~~~----~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~-~yip~~l~~~~~Dyval 244 (417)
T 4fbw_A 174 FTKL-ALYG---ISNVRDERLYHSFREN----KVKFLRPDLYRDEWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLW 244 (417)
T ss_dssp TEEE-EEEE---ECCCCHHHHHHHHHTT----CEEEEEESTTTTTSEEEEEEESCSSCSSSS-SSCCGGGSCTTCSEEEE
T ss_pred CceE-EEEe---ccCCchhhhhhhhhhh----hhhhcCcccccCCceEEEEecCCccCCCCc-ccCchhHhhcCCCEEEe
Confidence 3333 4566 566554432 222211 1111111 123568999999764321100 00101234568999999
Q ss_pred CCCCCCceEE----EcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEEeec-CceeEEEEeecc
Q psy10859 156 GHTHKFEAYE----HENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQLIA-DEVTVERIDYKK 223 (224)
Q Consensus 156 GH~H~~~~~~----~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (224)
||+|.+.... .++.+++||||+...-.+..+...++|.+++++++.++++++.+.. .++....+++..
T Consensus 245 GH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 245 GHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp ESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred cCccccceeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeec
Confidence 9999998764 3578999999987421111122588999999999999999999986 668888888754
No 19
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.89 E-value=4e-22 Score=166.06 Aligned_cols=213 Identities=18% Similarity=0.234 Sum_probs=132.9
Q ss_pred CeEEEEeeccCCCCCCCC---------hHHHHHhhcCCCccEEEEcCCCCC---------hHHHHHHHh-----------
Q psy10859 1 MLVLVLGDLHIPHRTSGL---------PAKFKKLLVPGRIQHILCTGNLVT---------KETFDYLKT----------- 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~---------~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~----------- 51 (224)
|||+++||+|++...... .+.+.+.+++.++|+|+++||+++ ..+.+.|++
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~~~ 112 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFE 112 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCCCE
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCcccce
Confidence 899999999986543211 123444456789999999999998 234444442
Q ss_pred -------------------------cCCcEEEecCCCCCCCC------------------CCc----------ceEEEeC
Q psy10859 52 -------------------------LASDVHVVRGDFDEGTS------------------YPE----------KKVVTVG 78 (224)
Q Consensus 52 -------------------------l~~~v~~v~GNHD~~~~------------------~~~----------~~~~~~~ 78 (224)
.+.||++|.||||.... +.. ...+..+
T Consensus 113 ~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~~~e~i~~~Pv~l~~g 192 (431)
T 3t1i_A 113 ILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKG 192 (431)
T ss_dssp ECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCCCSSCEEECCEEEEET
T ss_pred eccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcCcccceeeEEEEEecC
Confidence 36899999999997631 000 0011123
Q ss_pred CEEEEeeecCcccCCCCHHHHHH-HHH-hhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHHHHHhhhcCCcEEEEC
Q psy10859 79 QFRIGLCHGHDIIPWGDPEALAL-LQR-QLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISG 156 (224)
Q Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~-l~~-~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l~~~~~~~~~~~vi~G 156 (224)
+.++ .++| +++..++.+.- +.. .+.. ..|. ....+.+.|++.|+..... ...+.+..-+...++|++++|
T Consensus 193 ~~~v-alyG---l~~~~~~~l~~~~~~~~v~~-~~p~--~~~~~~~~Ilv~H~~~~~~-g~~~~ip~~l~~~~~Dyv~lG 264 (431)
T 3t1i_A 193 STKI-ALYG---LGSIPDERLYRMFVNKKVTM-LRPK--EDENSWFNLFVIHQNRSKH-GSTNFIPEQFLDDFIDLVIWG 264 (431)
T ss_dssp TEEE-EEEE---ECCCCHHHHHHHHHTTCEEE-CCCS--SCGGGEEEEEEECSCCSCS-SSSSSCCGGGSCTTCCEEEEC
T ss_pred CEeE-EEEe---CCCCCHHHHhhhhcccccee-eccc--ccCCCceEEEEECCCccCC-CccccCCHhHhhCCCCEEEec
Confidence 3333 4556 56666554332 221 0100 0010 1123457899999864211 011111112234579999999
Q ss_pred CCCCCceEE----EcCEEEEcCCCCCCCCCCCC--CCCCCeEEEEEEeCCeEEEEEEEee-cCceeEEEEeecc
Q psy10859 157 HTHKFEAYE----HENKFYINPGSATGAFNPLE--PKVNPSFVLMDIQSSNVVTYVYQLI-ADEVTVERIDYKK 223 (224)
Q Consensus 157 H~H~~~~~~----~~~~~~in~Gs~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (224)
|+|.+.... .++.+++||||+... ... +..+.+|.+++++++.++++++++. ..+|...++++..
T Consensus 265 H~H~~~~~~~~~~~~~~~i~yPGS~~~~--s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~~ 336 (431)
T 3t1i_A 265 HEHECKIAPTKNEQQLFYISQPGSSVVT--SLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLAN 336 (431)
T ss_dssp SCCSCEEEEEECTTTCCEEEECCCSSCC--SCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred ccccccccccccCCCCEEEEeCCCCccc--CcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEec
Confidence 999998764 257899999999852 111 1356799999999999999999998 6778888888753
No 20
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.88 E-value=2.1e-22 Score=162.20 Aligned_cols=205 Identities=14% Similarity=0.117 Sum_probs=133.4
Q ss_pred CeEEEEeeccCCCCCC-------CChHHHHHhhcCCCccEEEEcCCCCC---------hHHHHHHHh------c-CCcEE
Q psy10859 1 MLVLVLGDLHIPHRTS-------GLPAKFKKLLVPGRIQHILCTGNLVT---------KETFDYLKT------L-ASDVH 57 (224)
Q Consensus 1 mki~~isDiH~~~~~~-------~~~~~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~~------l-~~~v~ 57 (224)
|||+++||+|...... .+.+.+.+.++..++|+|+++||++. .+..+.+++ + +.|++
T Consensus 7 ~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 86 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWH 86 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCEE
T ss_pred eEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCEE
Confidence 6899999999854211 11234555455678999999999853 234444432 4 68999
Q ss_pred EecCCCCCCCC---------------CCc-ceEEEe------CCEEEEeeecCccc------------CC----CCHHHH
Q psy10859 58 VVRGDFDEGTS---------------YPE-KKVVTV------GQFRIGLCHGHDII------------PW----GDPEAL 99 (224)
Q Consensus 58 ~v~GNHD~~~~---------------~~~-~~~~~~------~~~~~~~~~g~~~~------------~~----~~~~~~ 99 (224)
+++||||.... ++. .+.+.+ ++.+++++...... .+ ...+++
T Consensus 87 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 166 (313)
T 1ute_A 87 VLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 166 (313)
T ss_dssp ECCCHHHHHSCHHHHHHGGGTSTTEECCSSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHH
T ss_pred EECCCCccCCCccccccccccCCCccCcccceEEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchHHHHH
Confidence 99999997531 111 122333 25666655432110 01 134577
Q ss_pred HHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCC---C---HHHHHHHhhhcCCcEEEECCCCCCceEE-EcCEEEE
Q psy10859 100 ALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWG---D---PEALALLQRQLDVDILISGHTHKFEAYE-HENKFYI 172 (224)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~---~---~~~l~~~~~~~~~~~vi~GH~H~~~~~~-~~~~~~i 172 (224)
+|+++.|... ....+|+++|.++..... . .+.+..++++++++++++||+|...... .+++.++
T Consensus 167 ~wL~~~L~~~---------~~~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i 237 (313)
T 1ute_A 167 AWIKKQLAAA---------KEDYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFV 237 (313)
T ss_dssp HHHHHHHHHC---------CCSEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEE
T ss_pred HHHHHHHHhC---------CCCeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEE
Confidence 8888776321 136789999977654221 1 2345566777899999999999876655 5789999
Q ss_pred cCCCCCCCCCCCC-----------------CCCCCeEEEEEEeCCeEEEEEEEeecCcee
Q psy10859 173 NPGSATGAFNPLE-----------------PKVNPSFVLMDIQSSNVVTYVYQLIADEVT 215 (224)
Q Consensus 173 n~Gs~~~~~~~~~-----------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 215 (224)
++|+.+... |.. .....+|++++++++.+++++++..+..+.
T Consensus 238 ~~gs~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~~~~~~~~~~~g~~~~ 296 (313)
T 1ute_A 238 LSGAGNFMD-PSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLF 296 (313)
T ss_dssp EECBSSCCC-CCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSSCEEEEEEETTSCEEE
T ss_pred EECCCcCcC-ccccccccCCCcccceeccCcCCCCceEEEEEEcCEEEEEEEcCCCcEEE
Confidence 999988531 211 012379999999999999999999665543
No 21
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.88 E-value=4.9e-22 Score=150.27 Aligned_cols=148 Identities=18% Similarity=0.186 Sum_probs=100.8
Q ss_pred CeEEEEeeccCCCCC----------CCChHHHHHhhcC--CCccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCC
Q psy10859 1 MLVLVLGDLHIPHRT----------SGLPAKFKKLLVP--GRIQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDF 63 (224)
Q Consensus 1 mki~~isDiH~~~~~----------~~~~~~l~~~~~~--~~~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNH 63 (224)
|||+++||+|++... .+..+.+.+.+++ .++|.|+++||+++ .++++.++++..|+++|+|||
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~~~~~~v~GNh 81 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALPGRKILVMGNH 81 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSSSEEEEECCTT
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCCCCEEEEeCCC
Confidence 899999999975431 0112234444443 58999999999987 378888988877999999999
Q ss_pred CCCCC-CCcceEEEeCCEEEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeee-eCCeEEEeeccCCCCCCCC----
Q psy10859 64 DEGTS-YPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVT-VGQFRIGLCHGHDIIPWGD---- 137 (224)
Q Consensus 64 D~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~i~~~H~~~~~~~~~---- 137 (224)
|.... +. ..|. .++....+. .++.+++++|++|......
T Consensus 82 D~~~~~~~--------------------~~~~---------------~l~~~~~l~~~~~~~i~~~H~~~~~~~~~~~~~ 126 (195)
T 1xm7_A 82 DKDKESLK--------------------EYFD---------------EIYDFYKIIEHKGKRILLSHYPAKDPITERYPD 126 (195)
T ss_dssp CCCHHHHT--------------------TTCS---------------EEESSEEEEEETTEEEEEESSCSSCSSCCSCHH
T ss_pred CCchhhhh--------------------hhhh---------------chhHHHHHHhcCCcEEEEEccCCcCCCcccccc
Confidence 98520 00 0010 111112222 5778999999887554322
Q ss_pred -HHHHHHHhhhcCCcEEEECCCCCCceEEEc-----CEEEEcCCCCCCCCCC
Q psy10859 138 -PEALALLQRQLDVDILISGHTHKFEAYEHE-----NKFYINPGSATGAFNP 183 (224)
Q Consensus 138 -~~~l~~~~~~~~~~~vi~GH~H~~~~~~~~-----~~~~in~Gs~~~~~~~ 183 (224)
.+.+.+.++..+++++++||+|.+.....+ ++.++|+|+....|.|
T Consensus 127 ~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~~~~~~~p 178 (195)
T 1xm7_A 127 RQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANVEWNDYKP 178 (195)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBGGGTTTCC
T ss_pred hHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeEeccCCee
Confidence 456666777788999999999999877664 6778999987754444
No 22
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.87 E-value=4.3e-22 Score=162.72 Aligned_cols=206 Identities=18% Similarity=0.129 Sum_probs=116.3
Q ss_pred CeEEEEeeccCC----CCCCC---------ChHHHHHhhcCCCccEEEEcCC-CCC-----h----HHHHHHHhcC--Cc
Q psy10859 1 MLVLVLGDLHIP----HRTSG---------LPAKFKKLLVPGRIQHILCTGN-LVT-----K----ETFDYLKTLA--SD 55 (224)
Q Consensus 1 mki~~isDiH~~----~~~~~---------~~~~l~~~~~~~~~D~vi~~GD-l~~-----~----~~~~~l~~l~--~~ 55 (224)
|||+++||+|++ ..... ..+.+.+.++++++|+|+++|| ++| . .+.+.|+++. .|
T Consensus 19 mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~~~p 98 (336)
T 2q8u_A 19 LKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 98 (336)
T ss_dssp EEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred eEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 899999999975 21111 1123344445678999999999 998 1 2455666664 79
Q ss_pred EEEecCCCCCCCCCCc-----------ceEE---------EeCCEEEEeeecCcccCCCCH------------HHHHHHH
Q psy10859 56 VHVVRGDFDEGTSYPE-----------KKVV---------TVGQFRIGLCHGHDIIPWGDP------------EALALLQ 103 (224)
Q Consensus 56 v~~v~GNHD~~~~~~~-----------~~~~---------~~~~~~~~~~~g~~~~~~~~~------------~~~~~l~ 103 (224)
+++|+||||... ... ...+ .+.+..+ .+.| .++..+ +..+++.
T Consensus 99 v~~i~GNHD~~~-~~~~~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v-~i~g---lp~~~~~~~~~~~~~~~~~~~~~~~ 173 (336)
T 2q8u_A 99 VVVLPGNHDWKG-LKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKV-RILP---FPYPDESEALRKNEGDFRFFLESRL 173 (336)
T ss_dssp EEECCC-------CHHHHHHHHHHCSSEEECCSSSCEEEECTTSCEE-EEEE---ECCC-------CCSSHHHHHHHHHH
T ss_pred EEEECCCCCccc-cccHHHHHHhcCCEEEEEecccccCceEEeCCCE-EEEE---CCCCCHHHHHHHhhHHHHHHHHHHH
Confidence 999999999864 210 1100 0111111 1122 233221 1123332
Q ss_pred HhhcCCCCCCceee-eeCCeEEEeeccCCCCCCC-CHHH------HHHHhhhcCCcEEEECCCCCCceEEEcCEEEEcCC
Q psy10859 104 RQLDGTSYPEKKVV-TVGQFRIGLCHGHDIIPWG-DPEA------LALLQRQLDVDILISGHTHKFEAYEHENKFYINPG 175 (224)
Q Consensus 104 ~~l~~~~~~~~~~~-~~~~~~i~~~H~~~~~~~~-~~~~------l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in~G 175 (224)
+.+.. .. ..+..+|+++|+++..... +.+. +...+...+++++++||+|.+.... ++..++|||
T Consensus 174 ~~l~~-------~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~-~~~~i~y~G 245 (336)
T 2q8u_A 174 NKLYE-------EALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ-KQPLTIYPG 245 (336)
T ss_dssp HHHHH-------HHHTCSSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEE-ETTEEEECC
T ss_pred HHHHH-------hccCCCCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeC-CCccEEECC
Confidence 22200 00 2356789999987653221 1111 1011234589999999999998765 345788999
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEeCC-eEEEEEEEeecCceeEEEEe
Q psy10859 176 SATGAFNPLEPKVNPSFVLMDIQSS-NVVTYVYQLIADEVTVERID 220 (224)
Q Consensus 176 s~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (224)
|+... .....+.+++|++++++++ .++++++++...++...+++
T Consensus 246 S~~~~-s~~e~~~~~~~~lv~i~~~~~~~v~~i~~~~r~~~~~~~~ 290 (336)
T 2q8u_A 246 SLIRI-DFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYYK 290 (336)
T ss_dssp CSSCC-SGGGTTCCCEEEEEEEETTSCCEEEEEECCCCCEEEEEEE
T ss_pred CCcCC-CccccCCCCEEEEEEEeCCCccEEEEEECCCEEEEEeecc
Confidence 98631 1112234789999999965 58999999988777775553
No 23
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.87 E-value=1.3e-20 Score=149.72 Aligned_cols=163 Identities=20% Similarity=0.178 Sum_probs=106.6
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-------hHHHHHHHhcC-CcEEEecCCCCCCCC----
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-------KETFDYLKTLA-SDVHVVRGDFDEGTS---- 68 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-------~~~~~~l~~l~-~~v~~v~GNHD~~~~---- 68 (224)
|||+++||+|.+.. .+ +..++|+||++||+++ ...++.|+++. .++++|+||||....
T Consensus 60 mri~~iSD~H~~~~--~l--------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l~~~~v~~V~GNHD~~~d~~~~ 129 (296)
T 3rl5_A 60 TRFVCISDTRSRTD--GI--------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFM 129 (296)
T ss_dssp EEEEEEBCCTTCCT--TC--------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTSCCSEEEECCCTTCGGGCHHHH
T ss_pred eEEEEEeeCCCCcc--hh--------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhCCCCeEEEEcCCcccccchhhh
Confidence 89999999998543 11 2357999999999998 34667777774 569999999998531
Q ss_pred ---------------------------------CCcceEEEeCCEEEEeeecCc-ccCCC-CHHHHHHHHHhhcCCCCCC
Q psy10859 69 ---------------------------------YPEKKVVTVGQFRIGLCHGHD-IIPWG-DPEALALLQRQLDGTSYPE 113 (224)
Q Consensus 69 ---------------------------------~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~~l~~~l~~~~~~~ 113 (224)
+.+....++.|+++....+.- ..+|. ..+..+.+...+ ..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~--~~i-- 205 (296)
T 3rl5_A 130 ADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKW--NLI-- 205 (296)
T ss_dssp HHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHH--TTS--
T ss_pred hhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHH--hhC--
Confidence 011235677788776432210 00111 000001111000 111
Q ss_pred ceeeeeCCeEEEeeccCCCCCC---------CCHHHHHHHh-hhcCCcEEEECCCCCCce-EEEcCEEEEcCCCCCCCCC
Q psy10859 114 KKVVTVGQFRIGLCHGHDIIPW---------GDPEALALLQ-RQLDVDILISGHTHKFEA-YEHENKFYINPGSATGAFN 182 (224)
Q Consensus 114 ~~~~~~~~~~i~~~H~~~~~~~---------~~~~~l~~~~-~~~~~~~vi~GH~H~~~~-~~~~~~~~in~Gs~~~~~~ 182 (224)
..+..|+++|++|.... .+.+.+.+.+ ++.++++++|||+|.+.. ...+++.++||||++.++.
T Consensus 206 -----p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~~ 280 (296)
T 3rl5_A 206 -----PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQ 280 (296)
T ss_dssp -----CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTSC
T ss_pred -----CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCcC
Confidence 24668999999986542 2456666666 578999999999999875 4568999999999996543
No 24
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.85 E-value=1.4e-20 Score=155.87 Aligned_cols=210 Identities=18% Similarity=0.150 Sum_probs=119.0
Q ss_pred CeEEEEeeccCCCC----CCCC---------hHHHHHhhcCCCccEEEEcCCCC-C------------hHHHHHHHhcCC
Q psy10859 1 MLVLVLGDLHIPHR----TSGL---------PAKFKKLLVPGRIQHILCTGNLV-T------------KETFDYLKTLAS 54 (224)
Q Consensus 1 mki~~isDiH~~~~----~~~~---------~~~l~~~~~~~~~D~vi~~GDl~-~------------~~~~~~l~~l~~ 54 (224)
|||+++||+|++.. .... .+.+.+.++..++|+|+++||++ | .+.+..|.+. +
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~-~ 79 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT-A 79 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-S
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 99999999998654 2111 12334444567999999999999 6 1233334444 7
Q ss_pred cEEEecCCCCCCC---------CCCc---------ceEEE-eCCEEEEeeecCcccCCCC---------HHHHHHHHHhh
Q psy10859 55 DVHVVRGDFDEGT---------SYPE---------KKVVT-VGQFRIGLCHGHDIIPWGD---------PEALALLQRQL 106 (224)
Q Consensus 55 ~v~~v~GNHD~~~---------~~~~---------~~~~~-~~~~~~~~~~g~~~~~~~~---------~~~~~~l~~~l 106 (224)
|+++|+||||... .++. ...+. ..|..+. +.| .++.. .+...|+.+.+
T Consensus 80 ~v~~i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~G~~v~-i~g---lp~~~~~~~~~~~~~~~~~~l~~~l 155 (379)
T 3tho_B 80 PVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVR-ILP---FPYPDESEALRKNEGDFRFFLESRL 155 (379)
T ss_dssp CEEECCCTTSCTTHHHHHHHHHTTCSSEEECCSSCCEEEECTTCCEEE-EEE---ECCCCCC----CHHHHHHHHHHHHH
T ss_pred CEEEEcCCCccccCccccccccccCCcceeecccceEEEEcCCCCEEE-EEE---CCCCCHHHHhhhhccchHHHHHHHH
Confidence 9999999999753 1111 11111 1232222 223 23321 12233444333
Q ss_pred cCCCCCCceeeeeCCeEEEeeccCCCCCCC--CHHH-----HHHHhhhcCCcEEEECCCCCCceEEEcCEEEEcCCCCCC
Q psy10859 107 DGTSYPEKKVVTVGQFRIGLCHGHDIIPWG--DPEA-----LALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATG 179 (224)
Q Consensus 107 ~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~--~~~~-----l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~ 179 (224)
.. .. ......+...|++.|++...... +.+. +...+...+++++++||+|.+.... ++.++.||||+..
T Consensus 156 ~~-~~--~~~~~~~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~-~~~~i~y~GS~~~ 231 (379)
T 3tho_B 156 NK-LY--EEALKKEDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ-KQPLTIYPGSLIR 231 (379)
T ss_dssp HH-HH--HHHHTCSSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEE-ETTEEEECCCSSC
T ss_pred HH-HH--HHhcCCCCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeC-CCCcEEecCCCCC
Confidence 10 00 00112456789999977643321 1111 1111223579999999999995433 3357889999963
Q ss_pred CCCCCCCCCCCeEEEEEEeCC-eEEEEEEEeecCceeEEEEe
Q psy10859 180 AFNPLEPKVNPSFVLMDIQSS-NVVTYVYQLIADEVTVERID 220 (224)
Q Consensus 180 ~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 220 (224)
. .....+.+++|.+++++++ .+++++++....++...+.+
T Consensus 232 ~-~f~E~~~~k~~~lv~~~~~~~~~v~~i~~~~r~~~~~~~~ 272 (379)
T 3tho_B 232 I-DFGEEADEKGAVFVELKRGEPPRYERIDASPLPLKTLYYK 272 (379)
T ss_dssp C-SGGGSSSCCEEEEEECCSSSCCEEEEEECCCCCEEEEECS
T ss_pred C-CcccccCCCEEEEEEEcCCCcceEEEeCCCCeeeEEEEcC
Confidence 1 1112234789999999865 47888888545555554443
No 25
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.83 E-value=2e-19 Score=146.75 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=114.5
Q ss_pred CeEEEEeeccCCCCCCCCh-------H---HHHHhhcCCCccEEEEcCCCCC---------hHHHHHHH---hcCCcEEE
Q psy10859 1 MLVLVLGDLHIPHRTSGLP-------A---KFKKLLVPGRIQHILCTGNLVT---------KETFDYLK---TLASDVHV 58 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~-------~---~l~~~~~~~~~D~vi~~GDl~~---------~~~~~~l~---~l~~~v~~ 58 (224)
|||+++||+|++....... + .+.+.++++++|+|+++||+++ ....+.++ +.+.|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 9999999999865311110 1 2333345679999999999998 12223344 33689999
Q ss_pred ecCCCCCCCCCCc----------ceEEE------------e--------------CCEEEEeeecCcccCCCCHHHHHH-
Q psy10859 59 VRGDFDEGTSYPE----------KKVVT------------V--------------GQFRIGLCHGHDIIPWGDPEALAL- 101 (224)
Q Consensus 59 v~GNHD~~~~~~~----------~~~~~------------~--------------~~~~~~~~~g~~~~~~~~~~~~~~- 101 (224)
|+||||....... ...+. . ++.. +.| .++..+.+.+-
T Consensus 81 v~GNHD~~~~~~~~~~~l~~~g~v~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---i~g---~~~~~~~~~~~~ 154 (333)
T 1ii7_A 81 IEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLE---IHG---MKYMSSAWFEAN 154 (333)
T ss_dssp ECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEECTTSCEEEEEEETTEE---EEE---ECCCCHHHHHSS
T ss_pred eCCcCCCccCCcCHHHHHHHcCCcEEecccccccccceeeecccCCCceeeccCcCCEE---EEe---cCCcCHHHHHHH
Confidence 9999998631100 01111 0 1111 122 23333332210
Q ss_pred ---HHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC-----CCCHH-HHHHHhhhcCCcEEEECCCCCCceEEEcCEEEE
Q psy10859 102 ---LQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP-----WGDPE-ALALLQRQLDVDILISGHTHKFEAYEHENKFYI 172 (224)
Q Consensus 102 ---l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~-----~~~~~-~l~~~~~~~~~~~vi~GH~H~~~~~~~~~~~~i 172 (224)
+... .......|+++|++.... ..... .+..+. .+++++++||+|.+.....++..++
T Consensus 155 ~~~l~~~-----------~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~~l~--~~~dyvalGH~H~~q~~~~~~~~i~ 221 (333)
T 1ii7_A 155 KEILKRL-----------FRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLP--EGYLYYALGHIHKRYETSYSGSPVV 221 (333)
T ss_dssp TTHHHHH-----------CCCCSSEEEEEECCBHHHHHTTTCCCCSBCGGGSC--TTCSEEEEESCSSCEEEEETTEEEE
T ss_pred HHHHHHh-----------hCCCCCeEEEEcCChhhcccccccccceecHHHCC--ccCCEEEccccccceecCCCCceEE
Confidence 1111 112335899999764210 00000 011121 3689999999999997766789999
Q ss_pred cCCCCCCCCCCCCC---------------CCCCeEEEEEEeCCeEEEEEEEeecCceeEEEEe
Q psy10859 173 NPGSATGAFNPLEP---------------KVNPSFVLMDIQSSNVVTYVYQLIADEVTVERID 220 (224)
Q Consensus 173 n~Gs~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (224)
+|||+... ..... +.+.+|.+++ ..+++++++...++...+++
T Consensus 222 ypGS~~~~-~~~E~~~~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~i~l~~r~~~~~~i~ 279 (333)
T 1ii7_A 222 YPGSLERW-DFGDYEVRYEWDGIKFKERYGVNKGFYIVE----DFKPRFVEIKVRPFIDVKIK 279 (333)
T ss_dssp ECCCSSCC-SGGGCSEEEEECSSSEEEEECCCCEEEEEE----TTEEEEEECCCCCEEEEEEE
T ss_pred EcCCCeec-ccchhccccccccccccccccCCCeEEEEe----cCceeEEECCCCceEEEEec
Confidence 99999741 11111 2378999999 35789999988888655554
No 26
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.82 E-value=1.6e-19 Score=147.08 Aligned_cols=210 Identities=17% Similarity=0.139 Sum_probs=134.5
Q ss_pred CeEEEEeeccCCCCC-CCChHHHHHhhcCCCccEEEEcCCCCC--------hHHHHHHH--------hcCCcEEEecCCC
Q psy10859 1 MLVLVLGDLHIPHRT-SGLPAKFKKLLVPGRIQHILCTGNLVT--------KETFDYLK--------TLASDVHVVRGDF 63 (224)
Q Consensus 1 mki~~isDiH~~~~~-~~~~~~l~~~~~~~~~D~vi~~GDl~~--------~~~~~~l~--------~l~~~v~~v~GNH 63 (224)
+||+++||+|.+... ....+.+.+.++..++|+|+++||+++ ....+.++ .++.|++.|+|||
T Consensus 4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNH 83 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTR 83 (342)
T ss_dssp EEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHH
T ss_pred EEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCC
Confidence 489999999974321 012235566666789999999999995 11222222 2467999999999
Q ss_pred CCCCC----------------------------------CCcc-eE----EEe--------CC-----EEEEeeecCccc
Q psy10859 64 DEGTS----------------------------------YPEK-KV----VTV--------GQ-----FRIGLCHGHDII 91 (224)
Q Consensus 64 D~~~~----------------------------------~~~~-~~----~~~--------~~-----~~~~~~~g~~~~ 91 (224)
|+..+ +|.. +. +.. .| .+++++......
T Consensus 84 D~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~ 163 (342)
T 3tgh_A 84 DWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLS 163 (342)
T ss_dssp HHTSCHHHHHHHHHC---------------CCCSSCEEECSSSSEEEEEEEEEC---------CEEEEEEEEECCTTTTS
T ss_pred ccCCCchHhhhhhhcccccccccccccccccccCCCCccCCcceEEEEEEeeccccccccccCCCCceEEEEEEeCcccc
Confidence 97641 1111 11 122 12 344444331111
Q ss_pred ---CCC------CHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCC---CC---HHHHHHHhhhcCCcEEEEC
Q psy10859 92 ---PWG------DPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPW---GD---PEALALLQRQLDVDILISG 156 (224)
Q Consensus 92 ---~~~------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~---~~---~~~l~~~~~~~~~~~vi~G 156 (224)
++. ..++++||+++|. .....|+++|.++.... .. .+.+..++++++++++++|
T Consensus 164 ~~~~~~~~~~~~~~~Ql~WLe~~L~-----------~~~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsG 232 (342)
T 3tgh_A 164 SNFPYKKIHEKAWNDLKSQLSVAKK-----------IADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISG 232 (342)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHH-----------HCSEEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEEC
T ss_pred cCCcccccchHHHHHHHHHHHHhhc-----------cCCcEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 111 1246778887761 23678999996654321 11 2345678888999999999
Q ss_pred CCCCCceEEEcCEEEEcCCCCCCCCCC-CC-------CCCCCeEEEEEEeCCeEEEEEEE-eecCceeEEEEeecc
Q psy10859 157 HTHKFEAYEHENKFYINPGSATGAFNP-LE-------PKVNPSFVLMDIQSSNVVTYVYQ-LIADEVTVERIDYKK 223 (224)
Q Consensus 157 H~H~~~~~~~~~~~~in~Gs~~~~~~~-~~-------~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 223 (224)
|.|.......+++.++..|+.+..+.. .. .....+|++++++++++++++++ ..+.. ..++++.|
T Consensus 233 H~H~~~~~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~~l~~~~~~~~~G~v--ld~~~i~k 306 (342)
T 3tgh_A 233 HDNNMEVIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEV--IYTHKLNI 306 (342)
T ss_dssp SSSSEEEEEETTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETTEEEEEEEETTTTEE--EEEEEEEC
T ss_pred CCcceeEEeeCCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECCEEEEEEEECCCCcE--EEEEEEEC
Confidence 999998888889999999998764321 10 12568999999999999999998 44444 44555544
No 27
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.81 E-value=6.3e-20 Score=141.31 Aligned_cols=169 Identities=20% Similarity=0.226 Sum_probs=98.4
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC-CCccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCCCCCCC-CCcce
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP-GRIQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDFDEGTS-YPEKK 73 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNHD~~~~-~~~~~ 73 (224)
||++++||+|++.. .+.+ +.+.+.. .++|.++++||+++ .++++.+.+ .++++|+||||.... .....
T Consensus 13 ~~i~visDiHg~~~--~l~~-~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~--~~~~~v~GNhd~~~~~~~~~~ 87 (221)
T 1g5b_A 13 RNIWVVGDLHGCYT--NLMN-KLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF--PWFRAVRGNHEQMMIDGLSER 87 (221)
T ss_dssp SCEEEECCCTTCHH--HHHH-HHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS--TTEEECCCHHHHHHHHHHSTT
T ss_pred ceEEEEEcCCCCHH--HHHH-HHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc--CCEEEEccCcHHHHHhhhccC
Confidence 79999999997432 2222 2233333 37999999999999 455555544 489999999997530 00000
Q ss_pred EEEeCCEEEEeeec-CcccCCCCHHHHHHHHHhhcC-CCCCCceeeeeCCeEEEeeccCCCC-C--C---CCH-------
Q psy10859 74 VVTVGQFRIGLCHG-HDIIPWGDPEALALLQRQLDG-TSYPEKKVVTVGQFRIGLCHGHDII-P--W---GDP------- 138 (224)
Q Consensus 74 ~~~~~~~~~~~~~g-~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~i~~~H~~~~~-~--~---~~~------- 138 (224)
........++ .+.... .....+..+..+.+ ..+|.......++.+++++|++... . . ...
T Consensus 88 ----~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~ 162 (221)
T 1g5b_A 88 ----GNVNHWLLNGGGWFFNL-DYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNR 162 (221)
T ss_dssp ----CCCHHHHTTTGGGGGGS-CHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCC
T ss_pred ----CcHHHHHHcCCCchhhc-CHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCc
Confidence 0000000011 010000 11111111111111 4678777777788899999987421 1 0 111
Q ss_pred HHHHHHhh-----hcCCcEEEECCCCCCceEEEcCEEEEcCCCCCC
Q psy10859 139 EALALLQR-----QLDVDILISGHTHKFEAYEHENKFYINPGSATG 179 (224)
Q Consensus 139 ~~l~~~~~-----~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~ 179 (224)
+.+...++ ..+++++++||+|.+.....+++.++||||+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~~in~Gs~~g 208 (221)
T 1g5b_A 163 ERISNSQNGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFC 208 (221)
T ss_dssp HHHHHHHTTCCCCCBTSSEEEECSSCCSSCEEETTEEECCCCHHHH
T ss_pred hhhhhhccccCCcccCCCEEEECCCCCccceeeCCEEEEECCCCcC
Confidence 12222233 357899999999999988899999999999873
No 28
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.77 E-value=2.4e-17 Score=138.64 Aligned_cols=212 Identities=14% Similarity=0.129 Sum_probs=135.5
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC-CCccEEEEcCCCCCh------------HHHHHHHhc--CCcEEEecCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP-GRIQHILCTGNLVTK------------ETFDYLKTL--ASDVHVVRGDFDE 65 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~------------~~~~~l~~l--~~~v~~v~GNHD~ 65 (224)
|||+++||+|.... ....+.++.+. .++|+|+++||+++. +..+.++.+ ..|+++++||||.
T Consensus 127 ~~f~~~gD~~~~~~---~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 127 YVFGLIGDIGQTHD---SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEI 203 (426)
T ss_dssp EEEEEECSCTTBHH---HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGC
T ss_pred eEEEEEEeCCCCCc---hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEecccccc
Confidence 58999999997421 12344444433 489999999999961 123334433 5799999999998
Q ss_pred CCC-----------------CC---------cceEEEeCCEEEEeeecCcccCC-CCHHHHHHHHHhhcCCCCCCceeee
Q psy10859 66 GTS-----------------YP---------EKKVVTVGQFRIGLCHGHDIIPW-GDPEALALLQRQLDGTSYPEKKVVT 118 (224)
Q Consensus 66 ~~~-----------------~~---------~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~ 118 (224)
... +| ..+.++.++..++++.... .+ ...++++||++.|..... .
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~--~~~~~~~Q~~WL~~~L~~~~~------~ 275 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYS--GFVKYSPQYKWFTSELEKVNR------S 275 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTS--CCSTTSHHHHHHHHHHHHCCT------T
T ss_pred ccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcc--cCCCCHHHHHHHHHHHHhhhh------c
Confidence 531 11 2346778888887765421 12 245678899987742110 1
Q ss_pred eCCeEEEeeccCCCCCC-----CC---HHHHHHHhhhcCCcEEEECCCCCCceEE-------------------EcCEEE
Q psy10859 119 VGQFRIGLCHGHDIIPW-----GD---PEALALLQRQLDVDILISGHTHKFEAYE-------------------HENKFY 171 (224)
Q Consensus 119 ~~~~~i~~~H~~~~~~~-----~~---~~~l~~~~~~~~~~~vi~GH~H~~~~~~-------------------~~~~~~ 171 (224)
....+|+++|.++.... .+ .+.+..++.+++++++++||+|...... .+++.|
T Consensus 276 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~y 355 (426)
T 1xzw_A 276 ETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVY 355 (426)
T ss_dssp TCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEE
T ss_pred CCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEE
Confidence 13468899996654321 11 2345667788899999999999865321 246788
Q ss_pred EcCCCCCCCCC---------CCC---CCCCCeEEEEEEe-CCeEEEEEEEeecCc-eeEEEEeecc
Q psy10859 172 INPGSATGAFN---------PLE---PKVNPSFVLMDIQ-SSNVVTYVYQLIADE-VTVERIDYKK 223 (224)
Q Consensus 172 in~Gs~~~~~~---------~~~---~~~~~~~~~i~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (224)
|..|+.+.... |.+ .....||+++++. +..+.+++++-.+++ ...++|.+.|
T Consensus 356 i~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~ 421 (426)
T 1xzw_A 356 ITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLN 421 (426)
T ss_dssp EEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEEC
T ss_pred EEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEe
Confidence 88888664211 111 1245799999995 556889998655444 4677777765
No 29
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.74 E-value=1.6e-16 Score=133.58 Aligned_cols=213 Identities=14% Similarity=0.112 Sum_probs=131.5
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC-CCccEEEEcCCCCCh------------HHHHHHHhc--CCcEEEecCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP-GRIQHILCTGNLVTK------------ETFDYLKTL--ASDVHVVRGDFDE 65 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~~------------~~~~~l~~l--~~~v~~v~GNHD~ 65 (224)
|||+++||+|.... ..+.+.++.+. .++|+|+++||+++. ...+.++.+ ..|+++++||||.
T Consensus 120 ~~f~~igD~~~~~~---~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 120 YTFGLIGDLGQSFD---SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEI 196 (424)
T ss_dssp EEEEEECSCTTBHH---HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHH
T ss_pred eEEEEEEeCCCCCC---hHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCccc
Confidence 68999999997431 11234444332 389999999999972 112333333 4799999999997
Q ss_pred CC-----------------CCC---------cceEEEeCCEEEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeee
Q psy10859 66 GT-----------------SYP---------EKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTV 119 (224)
Q Consensus 66 ~~-----------------~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (224)
.. .+| ..+.++.++..++++........ ..++++||++.|..... ..
T Consensus 197 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~-~~~Q~~WL~~~L~~~~~------~~ 269 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGR-GTPQYTWLKKELRKVKR------SE 269 (424)
T ss_dssp CCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCST-TSHHHHHHHHHHHHCCT------TT
T ss_pred ccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCC-cHHHHHHHHHHHhhhcc------cC
Confidence 52 011 12467888888887654211111 24678899987742110 11
Q ss_pred CCeEEEeeccCCCCC----CC-CH---HHHHHHhhhcCCcEEEECCCCCCceEE-------------------EcCEEEE
Q psy10859 120 GQFRIGLCHGHDIIP----WG-DP---EALALLQRQLDVDILISGHTHKFEAYE-------------------HENKFYI 172 (224)
Q Consensus 120 ~~~~i~~~H~~~~~~----~~-~~---~~l~~~~~~~~~~~vi~GH~H~~~~~~-------------------~~~~~~i 172 (224)
....|++.|.++... +. +. +.+..++.+++++++++||+|...... .++..+|
T Consensus 270 ~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi 349 (424)
T 2qfp_A 270 TPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYI 349 (424)
T ss_dssp CCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEE
T ss_pred CCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEE
Confidence 246788888655432 11 11 345567778999999999999843321 1356777
Q ss_pred cCCCCCCCCC---------CCC---CCCCCeEEEEEEe-CCeEEEEEEEeecCc-eeEEEEeecc
Q psy10859 173 NPGSATGAFN---------PLE---PKVNPSFVLMDIQ-SSNVVTYVYQLIADE-VTVERIDYKK 223 (224)
Q Consensus 173 n~Gs~~~~~~---------~~~---~~~~~~~~~i~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (224)
..|+.+.... |.+ .....+|+.+++. ...+.+++++-.++. +..++|.+.|
T Consensus 350 ~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~ 414 (424)
T 2qfp_A 350 TIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFN 414 (424)
T ss_dssp EECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEEC
T ss_pred EecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEe
Confidence 7777664211 100 0135689999995 556788887654444 4578887765
No 30
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.65 E-value=1.8e-16 Score=124.94 Aligned_cols=176 Identities=13% Similarity=0.113 Sum_probs=100.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCC-ccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCCCCCC-----CC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGR-IQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDFDEGT-----SY 69 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~-~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNHD~~~-----~~ 69 (224)
||++++||+|++.. .+ .++.+.++... +|.++++||+++ .++++.+.++ ++++|+||||... .+
T Consensus 19 ~~i~visDiHg~~~--~l-~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~--~~~~v~GNHd~~~~~~~~~~ 93 (262)
T 2qjc_A 19 GRVIIVGDIHGCRA--QL-EDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL--GAYSVLGNHDAKLLKLVKKL 93 (262)
T ss_dssp SCEEEECCCTTCHH--HH-HHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH--TCEECCCHHHHHHHHHHHCC
T ss_pred CeEEEEeCCCCCHH--HH-HHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC--CCEEEeCcChHHHHhhhcCC
Confidence 49999999997431 22 22333334444 499999999998 4677777765 7999999999763 11
Q ss_pred CcceEEEeCCEEEEeeecCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCC----CCHHHHHH--
Q psy10859 70 PEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPW----GDPEALAL-- 143 (224)
Q Consensus 70 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~----~~~~~l~~-- 143 (224)
.....+...+... .+. +.......+...|++ .+|.... .++.+++++|+...... .....+..
T Consensus 94 ~~~~~~~~~~~~~-~~~--~~~~~l~~~~~~~l~------~lP~~~~--i~~~~i~~vHgg~~p~~~~~~~~~~~l~~ir 162 (262)
T 2qjc_A 94 GKKECLKGRDAKS-SLA--PLAQSIPTDVETYLS------QLPHIIR--IPAHNVMVAHAGLHPQRPVDRQYEDEVTTMR 162 (262)
T ss_dssp --------------CHH--HHHHHCCHHHHHHHH------TCCSEEE--EGGGTEEEESSCCCTTSCGGGCCHHHHHHCC
T ss_pred CccccccccchHH-HHH--HHHhhhhHHHHHHHH------cCCcEEE--ECCCcEEEEECCCCCCCCcccCCHHHHhhhh
Confidence 1100000000000 000 000001233344543 3554432 34567999998643211 11122211
Q ss_pred ---------------------------Hhhh-cCCcEEEECCCCCCceEEEc--CEEEEcCCCCCCCCCCCCCCCCCeEE
Q psy10859 144 ---------------------------LQRQ-LDVDILISGHTHKFEAYEHE--NKFYINPGSATGAFNPLEPKVNPSFV 193 (224)
Q Consensus 144 ---------------------------~~~~-~~~~~vi~GH~H~~~~~~~~--~~~~in~Gs~~~~~~~~~~~~~~~~~ 193 (224)
+.+. .+++.+++||+|.......+ ++..+|||++.+ +.++
T Consensus 163 ~~~~~~~~~~~G~~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~~~g----------G~Lt 232 (262)
T 2qjc_A 163 NLIEKEQEATGGVTLTATEETNDGGKPWASMWRGPETVVFGHDARRGLQEQYKPLAIGLDSRCVYG----------GRLS 232 (262)
T ss_dssp EEEEC-------CCEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGCCBCTTTTTEEECCCBGGGT----------SEEE
T ss_pred hcccccccCCCCccccccCCCCcCCCChhhccCCCCEEEECCCccccccccCCCCEEEeeCccccC----------CeeE
Confidence 1111 24789999999998777777 999999999862 4788
Q ss_pred EEEEeCCeE
Q psy10859 194 LMDIQSSNV 202 (224)
Q Consensus 194 ~i~~~~~~~ 202 (224)
.+.++++++
T Consensus 233 ~l~l~~~~~ 241 (262)
T 2qjc_A 233 AAVFPGGCI 241 (262)
T ss_dssp EEEETTTEE
T ss_pred EEEEcCCcE
Confidence 888887644
No 31
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=99.39 E-value=3.3e-11 Score=103.58 Aligned_cols=184 Identities=14% Similarity=0.139 Sum_probs=104.5
Q ss_pred CeEEEEeeccCCCCCC-----CC--hHHHHHhhcCC----Cc-cEEEEcCCCCC----------hHHHHHHHhcCCcEEE
Q psy10859 1 MLVLVLGDLHIPHRTS-----GL--PAKFKKLLVPG----RI-QHILCTGNLVT----------KETFDYLKTLASDVHV 58 (224)
Q Consensus 1 mki~~isDiH~~~~~~-----~~--~~~l~~~~~~~----~~-D~vi~~GDl~~----------~~~~~~l~~l~~~v~~ 58 (224)
|+|+++||+|+..... .+ ...+.+.++++ ++ ++++.+||+++ ...++.|+.++ ..++
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg-~d~~ 87 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG-YDAM 87 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT-CCEE
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC-CCEE
Confidence 6899999999853211 01 11222222221 34 79999999997 24567788886 4578
Q ss_pred ecCCCCCCC------------CCC-----------------cceEEEeCCEEEEeeecC--cccCCCCH-----------
Q psy10859 59 VRGDFDEGT------------SYP-----------------EKKVVTVGQFRIGLCHGH--DIIPWGDP----------- 96 (224)
Q Consensus 59 v~GNHD~~~------------~~~-----------------~~~~~~~~~~~~~~~~g~--~~~~~~~~----------- 96 (224)
++||||+.. .++ ...+++.+|.++.++.-. ....|..+
T Consensus 88 ~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~ 167 (516)
T 1hp1_A 88 AIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKP 167 (516)
T ss_dssp ECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCH
T ss_pred eeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEEeCH
Confidence 999999853 111 113567788887654211 11111111
Q ss_pred --HHHHHHHHhhcCCCCCCceee-eeCCeEEEeeccCCCCCC------CCHHHHHHHhhhcCCcEEEECCCCCCceE---
Q psy10859 97 --EALALLQRQLDGTSYPEKKVV-TVGQFRIGLCHGHDIIPW------GDPEALALLQRQLDVDILISGHTHKFEAY--- 164 (224)
Q Consensus 97 --~~~~~l~~~l~~~~~~~~~~~-~~~~~~i~~~H~~~~~~~------~~~~~l~~~~~~~~~~~vi~GH~H~~~~~--- 164 (224)
...+++++ + .. ...+..|+++|.+..... .....+...+...++|++++||+|.....
T Consensus 168 ~~~~~~~v~~-l---------~~~~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~~~~~ 237 (516)
T 1hp1_A 168 ADEAKLVIQE-L---------QQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAE 237 (516)
T ss_dssp HHHHHHHHHH-H---------HHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCEEET
T ss_pred HHHHHHHHHH-H---------HhcCCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCcccccCCc
Confidence 01122221 1 01 124578999996653210 12233333333334999999999986543
Q ss_pred ----------------EEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEE
Q psy10859 165 ----------------EHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVT 204 (224)
Q Consensus 165 ----------------~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 204 (224)
..++++++++|+.+. .-+..-++++++++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~iv~ag~~g~---------~lg~i~l~~~~~~~~~ 284 (516)
T 1hp1_A 238 NKKQVDYVPGTPCKPDQQNGIWIVQAHEWGK---------YVGRADFEFRNGEMKM 284 (516)
T ss_dssp TEECSSCCTTSCCCCEEETTEEEECBCSTTS---------EEEEEEEEEETTEEEE
T ss_pred cccccccCCCccccccCCCCcEEEecChhhh---------cccEEEEEEECCeEEE
Confidence 457899999999883 2244556666766543
No 32
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.37 E-value=6e-12 Score=102.63 Aligned_cols=63 Identities=22% Similarity=0.261 Sum_probs=44.6
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC--------CCccEEEEcCCCCC-----hHHHHHHHhc-------CCcEEEec
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP--------GRIQHILCTGNLVT-----KETFDYLKTL-------ASDVHVVR 60 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~--------~~~D~vi~~GDl~~-----~~~~~~l~~l-------~~~v~~v~ 60 (224)
||++++||+|++.. .+.+ +.+.+.. .++|.++++||++| .++++.|.++ ..+++++.
T Consensus 71 ~~i~vigDiHG~~~--~l~~-ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~~~~v~~v~ 147 (342)
T 2z72_A 71 KKVVALSDVHGQYD--VLLT-LLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLM 147 (342)
T ss_dssp CEEEEECCCTTCHH--HHHH-HHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCCCCHH--HHHH-HHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence 78999999998432 2222 2222211 15799999999999 5777777654 24799999
Q ss_pred CCCCCC
Q psy10859 61 GDFDEG 66 (224)
Q Consensus 61 GNHD~~ 66 (224)
||||..
T Consensus 148 GNHE~~ 153 (342)
T 2z72_A 148 GNHEQM 153 (342)
T ss_dssp CHHHHH
T ss_pred cCCcHH
Confidence 999975
No 33
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.32 E-value=2.9e-11 Score=102.97 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=44.3
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCC-CccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPG-RIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
||++++||||++.. ++.+ +.+.+... ..|.++++||++| .+++..|..+ ..++++++||||..
T Consensus 213 ~~~~vigDiHG~~~--~l~~-~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 213 EKITVCGDTHGQFY--DLLN-IFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp CEEEEECBCTTCHH--HHHH-HHHHHCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred cceEEEeCCCCCHH--HHHH-HHHHcCCCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 78999999998532 2222 22222222 3467999999999 5777777654 46899999999965
No 34
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=99.26 E-value=1.6e-10 Score=99.49 Aligned_cols=171 Identities=21% Similarity=0.248 Sum_probs=96.8
Q ss_pred CeEEEEeeccCCCCCCC-----------C--hHHHHHhhcCCCcc-EEEEcCCCCCh---------------HHHHHHHh
Q psy10859 1 MLVLVLGDLHIPHRTSG-----------L--PAKFKKLLVPGRIQ-HILCTGNLVTK---------------ETFDYLKT 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~-----------~--~~~l~~~~~~~~~D-~vi~~GDl~~~---------------~~~~~l~~ 51 (224)
++|+++||+|+...... + ...+.+.++++.++ +++.+||+++. ..++.|+.
T Consensus 20 l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln~ 99 (527)
T 3qfk_A 20 IAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNR 99 (527)
T ss_dssp EEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHHH
T ss_pred EEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHHh
Confidence 58999999997532111 1 11233334455665 66779999981 34566777
Q ss_pred cCCcEEEecCCCCCCC------------CC----------------CcceEEEeCCEEEEeeec--CcccCCCCHH----
Q psy10859 52 LASDVHVVRGDFDEGT------------SY----------------PEKKVVTVGQFRIGLCHG--HDIIPWGDPE---- 97 (224)
Q Consensus 52 l~~~v~~v~GNHD~~~------------~~----------------~~~~~~~~~~~~~~~~~g--~~~~~~~~~~---- 97 (224)
++.. ++++||||+.. .+ ....+++.+|.++.++.- .....|..+.
T Consensus 100 lg~D-~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g 178 (527)
T 3qfk_A 100 MAFD-FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQS 178 (527)
T ss_dssp TCCC-EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTT
T ss_pred cCCc-EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCC
Confidence 7644 57799999653 11 112456778888765431 1111122211
Q ss_pred -----HHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCC---------CCHHHHHHHhhh--cCCcEEEECCCCCC
Q psy10859 98 -----ALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPW---------GDPEALALLQRQ--LDVDILISGHTHKF 161 (224)
Q Consensus 98 -----~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~---------~~~~~l~~~~~~--~~~~~vi~GH~H~~ 161 (224)
..+.+++.+. ++. ...+..|+++|....... .+.....++++. .++|++++||+|..
T Consensus 179 ~~~~d~~~~~~~~v~------~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~ 251 (527)
T 3qfk_A 179 LTFHSAFEILQQYLP------EMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQ 251 (527)
T ss_dssp EEECCHHHHHHHHHH------HHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCE
T ss_pred cEEcCHHHHHHHHHH------HHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcc
Confidence 0111111110 011 224567889996532211 111111123332 58999999999998
Q ss_pred ceEEEcCEEEEcCCCCCC
Q psy10859 162 EAYEHENKFYINPGSATG 179 (224)
Q Consensus 162 ~~~~~~~~~~in~Gs~~~ 179 (224)
....+++++++++|+.+.
T Consensus 252 ~~~~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 252 IAERFKQTAVIQPGTRGT 269 (527)
T ss_dssp EEEEETTEEEEEECSTTS
T ss_pred cceEECCEEEeccChhhC
Confidence 887789999999999883
No 35
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=99.22 E-value=8e-10 Score=95.69 Aligned_cols=144 Identities=14% Similarity=0.193 Sum_probs=87.0
Q ss_pred cc-EEEEcCCCCC----------hHHHHHHHhcCCcEEEecCCCCCCC------------CC-----------------C
Q psy10859 31 IQ-HILCTGNLVT----------KETFDYLKTLASDVHVVRGDFDEGT------------SY-----------------P 70 (224)
Q Consensus 31 ~D-~vi~~GDl~~----------~~~~~~l~~l~~~v~~v~GNHD~~~------------~~-----------------~ 70 (224)
+| +++.+||+++ ...++.|+.++.++. + ||||+.. .+ +
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~ 200 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFP 200 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSC
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhCCcEE-e-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccC
Confidence 88 8899999998 356678888887864 6 9999742 11 1
Q ss_pred cceEEEeCCEEEEeeecCcc-c----------C--CCC--HHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCC
Q psy10859 71 EKKVVTVGQFRIGLCHGHDI-I----------P--WGD--PEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPW 135 (224)
Q Consensus 71 ~~~~~~~~~~~~~~~~g~~~-~----------~--~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~ 135 (224)
...+++.+|.++.++.-... . . ... ....+++++ + .....+..|+++|.+
T Consensus 201 py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-l---------~~~~~d~iIvLsH~g----- 265 (562)
T 2wdc_A 201 AYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDK-A---------RAEGANAVVLLSHNG----- 265 (562)
T ss_dssp SEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHH-H---------HHTTCSEEEEEECSC-----
T ss_pred CeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHH-H---------HHCCCCEEEEEeCCC-----
Confidence 12356778888765431000 0 0 000 011112111 1 011245679999953
Q ss_pred CCHHHHHHHhhh-cCCcEEEECCCCCCce--EEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeE
Q psy10859 136 GDPEALALLQRQ-LDVDILISGHTHKFEA--YEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNV 202 (224)
Q Consensus 136 ~~~~~l~~~~~~-~~~~~vi~GH~H~~~~--~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~ 202 (224)
.+.-..+++. .++|++++||+|.... ...++++++.+|+.+. .-+..-++++++++
T Consensus 266 --~~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~~g~---------~lg~i~l~~~~g~v 324 (562)
T 2wdc_A 266 --MQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGK---------ALMRVDLKLWKGGI 324 (562)
T ss_dssp --HHHHHHHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCSTTC---------EEEEEEEEEETTEE
T ss_pred --CcchHHHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCcccc---------EEEEEEEEEeCCcE
Confidence 2221234444 5899999999998754 3458999999999883 23566666677765
No 36
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=99.22 E-value=4e-09 Score=90.63 Aligned_cols=198 Identities=12% Similarity=0.120 Sum_probs=121.6
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC---hH------------------HHH------------
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT---KE------------------TFD------------ 47 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~---~~------------------~~~------------ 47 (224)
+||+++||.+.... ....+..+. +.++|++|++||.+. .. .++
T Consensus 117 ~rfa~~sc~~~~~g---~~~~~~~ia-~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~d 192 (527)
T 2yeq_A 117 MTFAFASCQQYEHG---YYTAYKHMA-KEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSD 192 (527)
T ss_dssp EEEEEECCCCGGGC---CCHHHHHHT-TSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTC
T ss_pred eEEEEEecCCCCCC---ccHHHHHHH-hcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCC
Confidence 47999999886322 224455554 478999999999995 10 011
Q ss_pred -HHHhc--CCcEEEecCCCCCCCCC-----------------------------C-------------cceEEEeCC-EE
Q psy10859 48 -YLKTL--ASDVHVVRGDFDEGTSY-----------------------------P-------------EKKVVTVGQ-FR 81 (224)
Q Consensus 48 -~l~~l--~~~v~~v~GNHD~~~~~-----------------------------~-------------~~~~~~~~~-~~ 81 (224)
.++.+ ..|++.++||||+..++ | ..+.+.+++ ..
T Consensus 193 p~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~ 272 (527)
T 2yeq_A 193 ANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLAS 272 (527)
T ss_dssp HHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEE
T ss_pred HHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcce
Confidence 12211 37999999999986421 1 013577777 77
Q ss_pred EEeeecCccc---------------------CCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC------
Q psy10859 82 IGLCHGHDII---------------------PWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP------ 134 (224)
Q Consensus 82 ~~~~~g~~~~---------------------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~------ 134 (224)
+.++...... .....++++||++.|... ....+|+++|.+....
T Consensus 273 ~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---------~a~W~Iv~s~~p~~~~~~~~g~ 343 (527)
T 2yeq_A 273 FNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---------TAHWNVLAQQIFFAKWNFGTSA 343 (527)
T ss_dssp EEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---------CSSEEEEECSSCCSCCCSSCSS
T ss_pred EEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---------CCCeEEEEeCCcccccccCCCc
Confidence 7766542211 113467889999887421 1456788888543221
Q ss_pred --------CC----CHHHHHHHhhhcCCc--EEEECCCCCCceEEEc-----------CEEEEcCCCCCCCCCCC-----
Q psy10859 135 --------WG----DPEALALLQRQLDVD--ILISGHTHKFEAYEHE-----------NKFYINPGSATGAFNPL----- 184 (224)
Q Consensus 135 --------~~----~~~~l~~~~~~~~~~--~vi~GH~H~~~~~~~~-----------~~~~in~Gs~~~~~~~~----- 184 (224)
|. ..+.+..++++.+++ ++|+||.|........ ++-++.++-.+..+.+.
T Consensus 344 ~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~ 423 (527)
T 2yeq_A 344 SPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDFEKTSSKIFGAEFVGTSITSGGNGADKRADT 423 (527)
T ss_dssp SCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESSTTCTTSCEEEEEEECCCSSTTCSCBSBCTTH
T ss_pred ccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccccCCCCCceEEEEEcCCeeCCCCcccchhhh
Confidence 11 123466677777774 9999999998765331 24455443333221110
Q ss_pred -----------CCCCCCeEEEEEEeCCeEEEEEEEeec
Q psy10859 185 -----------EPKVNPSFVLMDIQSSNVVTYVYQLIA 211 (224)
Q Consensus 185 -----------~~~~~~~~~~i~~~~~~~~~~~~~~~~ 211 (224)
......+|.+++++.++++++++....
T Consensus 424 ~~~~~~np~~~~~~~~~Gy~~v~vt~~~~~~~~~~v~~ 461 (527)
T 2yeq_A 424 DQILKENPHIQFFNDYRGYVRCTVTPHQWKADYRVMPF 461 (527)
T ss_dssp HHHHHHCTTEEEEEBCEEEEEEEEETTEEEEEEEEESC
T ss_pred hhhhhcCCcceeeeCCCCEEEEEEeccEEEEEEEEeCC
Confidence 011367999999999999999998843
No 37
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=99.20 E-value=3.1e-10 Score=98.24 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=43.9
Q ss_pred CeEEEEeeccCCCCCC------------CC--hHHHHHhhcCCCcc-EEEEcCCCCC----------hHHHHHHHhcCCc
Q psy10859 1 MLVLVLGDLHIPHRTS------------GL--PAKFKKLLVPGRIQ-HILCTGNLVT----------KETFDYLKTLASD 55 (224)
Q Consensus 1 mki~~isDiH~~~~~~------------~~--~~~l~~~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~l~~~ 55 (224)
++|+++||+|+..... .+ ...+.+.++++.+| +++.+||+++ ...++.|+.++.
T Consensus 30 l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg~- 108 (552)
T 2z1a_A 30 LTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRY- 108 (552)
T ss_dssp EEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTTC-
T ss_pred EEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcCC-
Confidence 5899999999743211 11 12233334455677 8899999998 356677888764
Q ss_pred EEEecCCCCCC
Q psy10859 56 VHVVRGDFDEG 66 (224)
Q Consensus 56 v~~v~GNHD~~ 66 (224)
.+++.||||+.
T Consensus 109 d~~~lGNHEfd 119 (552)
T 2z1a_A 109 RAMALGNHEFD 119 (552)
T ss_dssp CEEECCGGGGT
T ss_pred Ccccccccccc
Confidence 47889999985
No 38
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=99.18 E-value=1.4e-09 Score=93.17 Aligned_cols=171 Identities=18% Similarity=0.194 Sum_probs=94.7
Q ss_pred CeEEEEeeccCCCCCCC-------------Ch--HHHHHhhcCCCccEEEE-cCCCCC----------hHHHHHHHhcCC
Q psy10859 1 MLVLVLGDLHIPHRTSG-------------LP--AKFKKLLVPGRIQHILC-TGNLVT----------KETFDYLKTLAS 54 (224)
Q Consensus 1 mki~~isDiH~~~~~~~-------------~~--~~l~~~~~~~~~D~vi~-~GDl~~----------~~~~~~l~~l~~ 54 (224)
++|+++||+|+...... +. ..+.+.+++++++.|++ +||+++ ...++.|+.++.
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~lg~ 86 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTMPF 86 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTSCC
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhcCC
Confidence 47999999997432111 11 22333344567787777 999997 356777888764
Q ss_pred cEEEecCCCCCCC------------CC------------------CcceEEEeCCEEEEeeecCcc-----cCC------
Q psy10859 55 DVHVVRGDFDEGT------------SY------------------PEKKVVTVGQFRIGLCHGHDI-----IPW------ 93 (224)
Q Consensus 55 ~v~~v~GNHD~~~------------~~------------------~~~~~~~~~~~~~~~~~g~~~-----~~~------ 93 (224)
-+++.||||+.. .+ ....+++.+|.++.++.-... ..|
T Consensus 87 -D~~tlGNHEfd~G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~~g 165 (509)
T 3ive_A 87 -DAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVG 165 (509)
T ss_dssp -SEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGCTT
T ss_pred -cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccccccccCCC
Confidence 457789999653 11 112356778888765421000 000
Q ss_pred -CCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCC-CC--------CHHHHHHHhhh-cCCcEEEECCCCCCc
Q psy10859 94 -GDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIP-WG--------DPEALALLQRQ-LDVDILISGHTHKFE 162 (224)
Q Consensus 94 -~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~-~~--------~~~~l~~~~~~-~~~~~vi~GH~H~~~ 162 (224)
.-.+..+.+++.+. .+. .+ .+..|+++|...... .. ....-..+++. .++|++++||+|...
T Consensus 166 ~~~~d~~~~~~~~v~--~Lk----~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~giDlIlgGHtH~~~ 238 (509)
T 3ive_A 166 IEARDEIKWLQRYID--ELK----GK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGT 238 (509)
T ss_dssp EEECCHHHHHHHHHH--HHT----TT-CSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCC
T ss_pred CEEcCHHHHHHHHHH--HHH----hc-CCEEEEEeccCcCCccccccccccccccchHHHHHhcCCCCcEEEeCCcCccC
Confidence 00000111111110 011 11 456789999652111 00 01111223333 479999999999864
Q ss_pred --eEEEcCEEEEcCCCCCC
Q psy10859 163 --AYEHENKFYINPGSATG 179 (224)
Q Consensus 163 --~~~~~~~~~in~Gs~~~ 179 (224)
....+++.++.+|+.+.
T Consensus 239 ~~~~~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 239 PEPIKVGNTLILSTDSGGI 257 (509)
T ss_dssp SSCEEETTEEEECCCSTTS
T ss_pred CCCeeeCCEEEEecChhhc
Confidence 34678999999998873
No 39
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=99.15 E-value=7e-10 Score=88.70 Aligned_cols=63 Identities=21% Similarity=0.241 Sum_probs=44.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCC-CccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPG-RIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~-~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
||++++||||++.. ++.+.|.. .... ..+.++++||++| .+++..|..+ ...++++.||||..
T Consensus 60 ~ri~viGDIHG~~~--~L~~ll~~-~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 60 EKITVCGDTHGQFY--DLLNIFEL-NGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp CEEEEECCCTTCHH--HHHHHHHH-HCCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred ceEEEEecCCCCHH--HHHHHHHH-hCCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 78999999998542 22222222 2222 3356999999999 5777777755 35799999999975
No 40
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=99.09 E-value=8.2e-09 Score=82.63 Aligned_cols=64 Identities=23% Similarity=0.310 Sum_probs=46.7
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEGT 67 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~~ 67 (224)
|+++++||+|++.. ++. .+.+.+.....+.++++||++| .+++..|..+ ...++++.||||...
T Consensus 50 ~~i~viGDIHG~~~--~L~-~ll~~~~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 50 CPVTVCGDVHGQFH--DLM-ELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQ 122 (309)
T ss_dssp SSEEEECCCTTCHH--HHH-HHHHHHCCTTTSCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTT
T ss_pred CCEEEEecCCCCHH--HHH-HHHHHcCCCCCCEEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHH
Confidence 68999999998542 222 2333334456788999999999 5777777765 346999999999874
No 41
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=99.08 E-value=2.1e-09 Score=93.48 Aligned_cols=66 Identities=12% Similarity=0.092 Sum_probs=43.5
Q ss_pred CeEEEEeeccCCCCCCC----------------Ch--HHHHHhhcCCCcc-EEEEcCCCCC----------hHHHHHHHh
Q psy10859 1 MLVLVLGDLHIPHRTSG----------------LP--AKFKKLLVPGRIQ-HILCTGNLVT----------KETFDYLKT 51 (224)
Q Consensus 1 mki~~isDiH~~~~~~~----------------~~--~~l~~~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~ 51 (224)
++|+++||+|+...... +. ..+.+.++.+.++ +++.+||+++ ...++.|+.
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~ 92 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVMNA 92 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHHHH
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHHHh
Confidence 47999999997543211 11 1222333334455 8899999997 356778888
Q ss_pred cCCcEEEecCCCCCCC
Q psy10859 52 LASDVHVVRGDFDEGT 67 (224)
Q Consensus 52 l~~~v~~v~GNHD~~~ 67 (224)
++.. +++.||||+..
T Consensus 93 lg~D-~~tlGNHEfd~ 107 (579)
T 3ztv_A 93 GNFH-YFTLGNHEFDA 107 (579)
T ss_dssp HTCS-EEECCSGGGTT
T ss_pred cCcC-eeecccccccc
Confidence 8755 47899999763
No 42
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.02 E-value=9.3e-11 Score=92.94 Aligned_cols=63 Identities=25% Similarity=0.348 Sum_probs=47.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC-CCccEEEEcCCCCC-----hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP-GRIQHILCTGNLVT-----KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~-~~~D~vi~~GDl~~-----~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
||++++||+|++.. .+. .+.+.+.. .++|.++++||++| .++++.+.++..++++|+||||..
T Consensus 1 M~i~vigDiHG~~~--~l~-~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYD--ELI-ALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHH--HHH-HHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHTGGGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHH--HHH-HHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhCCCceEEEECCCcHH
Confidence 89999999998532 222 23333333 46899999999998 578888888756899999999976
No 43
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=98.97 E-value=2e-08 Score=81.03 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=46.3
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
|+++++||||++.. ++.+ +.+.+.....|.++++||++| .+++.+|..+ ...++++.||||..
T Consensus 57 ~~i~viGDIHG~~~--~L~~-ll~~~g~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYY--DLLR-LFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHH--HHHH-HHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHH--HHHH-HHHHhCCCCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 68999999998542 2222 233333456788999999999 6788877654 35799999999976
No 44
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=98.97 E-value=2.5e-09 Score=86.20 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=44.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCC-ccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGR-IQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~-~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
||++++||||++.. ++.+ +.+.+.... .+.++++||++| .+++..|..+ ...++++.||||..
T Consensus 64 ~ri~viGDIHG~~~--~L~~-ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 64 VKISVCGDTHGQFY--DVLN-LFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp CEEEEECCCTTCHH--HHHH-HHHHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ceEEEEecCCCCHH--HHHH-HHHHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 78999999998542 2222 222222222 356999999999 5777777665 25799999999965
No 45
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.92 E-value=3e-08 Score=85.68 Aligned_cols=65 Identities=15% Similarity=0.231 Sum_probs=42.8
Q ss_pred CeEEEEeeccCCCCCCCC--------------hHHH---HHhhcCCCc-cEEEEcCCCCC----------hHHHHHHHhc
Q psy10859 1 MLVLVLGDLHIPHRTSGL--------------PAKF---KKLLVPGRI-QHILCTGNLVT----------KETFDYLKTL 52 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~--------------~~~l---~~~~~~~~~-D~vi~~GDl~~----------~~~~~~l~~l 52 (224)
++|+++||+|+....... ...+ .+.++++.+ ++++.+||+++ ...++.|+.+
T Consensus 26 l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~l 105 (546)
T 4h2g_A 26 LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL 105 (546)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHH
T ss_pred EEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHhc
Confidence 479999999974321100 1222 222333444 69999999998 3567788888
Q ss_pred CCcEEEecCCCCCC
Q psy10859 53 ASDVHVVRGDFDEG 66 (224)
Q Consensus 53 ~~~v~~v~GNHD~~ 66 (224)
+.. +++.||||+.
T Consensus 106 g~d-~~~~GNHEfd 118 (546)
T 4h2g_A 106 RYD-AMALGNHEFD 118 (546)
T ss_dssp TCS-EEECCGGGGT
T ss_pred CCc-EEeccCcccc
Confidence 755 5889999964
No 46
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=1e-08 Score=83.31 Aligned_cols=60 Identities=15% Similarity=0.085 Sum_probs=37.5
Q ss_pred CCeEEEeeccCCCCCCC---CHHHHHHHhhhcCCcEEEECCCCCCce--------------EEEcCEEEEcCCCCCC
Q psy10859 120 GQFRIGLCHGHDIIPWG---DPEALALLQRQLDVDILISGHTHKFEA--------------YEHENKFYINPGSATG 179 (224)
Q Consensus 120 ~~~~i~~~H~~~~~~~~---~~~~l~~~~~~~~~~~vi~GH~H~~~~--------------~~~~~~~~in~Gs~~~ 179 (224)
.+..|+++|........ .......+.+-.++|+++.||+|.... ..+++++++.+|+.+.
T Consensus 202 ~D~II~l~H~G~~~d~~~~~~en~~~~~~~v~gID~IlgGHsH~~~~~~~~~~~~g~~~~~g~vn~v~vvqag~~G~ 278 (339)
T 3jyf_A 202 ADVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGD 278 (339)
T ss_dssp CSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSCSEESSGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred CCEEEEEeccCccccccccccchhHHHHhhCCCCCEEEeCCCccccccccccccCCccccCccCCCEEEEcCCcccc
Confidence 45678899965422111 110111122346899999999998642 1456889999999983
No 47
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=98.84 E-value=1.8e-08 Score=80.02 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=45.7
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
++++++||||++.. ++.+ +.+.......+.++++||++| .+++..|..+ ...++++.||||..
T Consensus 56 ~~i~viGDIHG~~~--~L~~-ll~~~g~~~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 56 APLKICGDIHGQYY--DLLR-LFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SSEEEECBCTTCHH--HHHH-HHHHHCSTTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCEEEEecCCCCHH--HHHH-HHHHhCCCCCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 57999999998542 2222 223334456788999999999 5777777654 34799999999975
No 48
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=98.83 E-value=2.6e-08 Score=84.00 Aligned_cols=63 Identities=24% Similarity=0.239 Sum_probs=46.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhcC----CcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTLA----SDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l~----~~v~~v~GNHD~~ 66 (224)
|+++++||||++.. ++.+ +.+.......|.++++||++| .+++.+|..++ ..++++.||||..
T Consensus 83 ~pI~VIGDIHGq~~--dL~~-LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFF--DLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHH--HHHH-HHHHHCCTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHH--HHHH-HHHhcCCCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 68999999998542 2222 222223445789999999999 57888777652 4699999999975
No 49
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.83 E-value=4.7e-08 Score=79.50 Aligned_cols=60 Identities=22% Similarity=0.130 Sum_probs=37.3
Q ss_pred CCeEEEeeccCCCCCCC---CHHHHHHHhh-hcCCcEEEECCCCCCce--------------EEEcCEEEEcCCCCCC
Q psy10859 120 GQFRIGLCHGHDIIPWG---DPEALALLQR-QLDVDILISGHTHKFEA--------------YEHENKFYINPGSATG 179 (224)
Q Consensus 120 ~~~~i~~~H~~~~~~~~---~~~~l~~~~~-~~~~~~vi~GH~H~~~~--------------~~~~~~~~in~Gs~~~ 179 (224)
.+..|+++|........ .......+++ -.++|+++.||+|.... ..+++++++.+|+.+.
T Consensus 208 ~D~II~l~H~G~~~d~~~~~~e~~~~~lA~~v~giD~IigGHsH~~~~~~~~~~~~~~~~~~g~v~~~~vvqag~~g~ 285 (341)
T 3gve_A 208 ADVIIALAHTGIEKQAQSSGAENAVFDLATKTKGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMPSSWGK 285 (341)
T ss_dssp CSEEEEEECCCCCSSCCCTTCSSCHHHHHHHCSCCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEECSTTS
T ss_pred CCEEEEEeccCccccccccccchhHHHHHhcCCCCcEEEECCCCccCCCcccccccccccccccCCCEEEEeCChhhc
Confidence 45678899965422110 1111112232 25899999999998642 1457889999998883
No 50
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.81 E-value=2e-08 Score=79.09 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=89.0
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC------hHHHHHHHhcCCcEEEecCCCCCCCC------
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT------KETFDYLKTLASDVHVVRGDFDEGTS------ 68 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~v~~v~GNHD~~~~------ 68 (224)
|||+++||+|+......+.+.+.++.++.++|+++..||-+. ...++.|+.++..+ ...|||++...
T Consensus 5 m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~Da-~TlGNHefD~g~~~~~~ 83 (281)
T 1t71_A 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNY-ITMGNHTWFQKLDLAVV 83 (281)
T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCE-EECCTTTTCCGGGHHHH
T ss_pred EEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCCE-EEEccCcccCCccHHHH
Confidence 899999999963211111122333322335899999888774 67888899988776 45599997642
Q ss_pred -----------CCc----------ceEEEeCCEEEEeee--cCc-ccC--CCCHHHHHHHHHhhcCCCCCCceeeeeCCe
Q psy10859 69 -----------YPE----------KKVVTVGQFRIGLCH--GHD-IIP--WGDPEALALLQRQLDGTSYPEKKVVTVGQF 122 (224)
Q Consensus 69 -----------~~~----------~~~~~~~~~~~~~~~--g~~-~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 122 (224)
+|. ..+++.+|.++.++. |.. +.+ ...+ .+..++.+. .+..+.
T Consensus 84 l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~p--f~~a~~~v~---------~~~~di 152 (281)
T 1t71_A 84 INKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP--FKVLKELIL---------KRDCDL 152 (281)
T ss_dssp TTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH--HHHHHHHHT---------TCCCSE
T ss_pred hhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCH--HHHHHHHHh---------hcCCCE
Confidence 111 135677888876543 332 222 1112 112222221 112356
Q ss_pred EEEeeccCCCCCCCCHHHHHHHhhh--cCCcEEEECCCCCCceE-EE--cCEEEEc
Q psy10859 123 RIGLCHGHDIIPWGDPEALALLQRQ--LDVDILISGHTHKFEAY-EH--ENKFYIN 173 (224)
Q Consensus 123 ~i~~~H~~~~~~~~~~~~l~~~~~~--~~~~~vi~GH~H~~~~~-~~--~~~~~in 173 (224)
.|+.+|... ..+. ..+.+. -++|+++.||+|.+... ++ +++.|+.
T Consensus 153 IIv~~H~g~-----t~Ek-~~la~~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~ 202 (281)
T 1t71_A 153 HIVDFHAET-----TSEK-NAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYIT 202 (281)
T ss_dssp EEEEEECSC-----HHHH-HHHHHHHTTTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred EEEEeCCCc-----hHHH-HHHHHhCCCCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence 788999532 1221 122322 35999999999998643 22 6776665
No 51
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=98.75 E-value=8.2e-08 Score=77.75 Aligned_cols=63 Identities=24% Similarity=0.243 Sum_probs=45.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC-----hHHHHHHHhc----CCcEEEecCCCCCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT-----KETFDYLKTL----ASDVHVVRGDFDEG 66 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~-----~~~~~~l~~l----~~~v~~v~GNHD~~ 66 (224)
++++++||||++.. ++.+ +.+.......|.++++||++| .+++..|..+ ...++++.||||..
T Consensus 70 ~pi~ViGDIHG~~~--dL~~-ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFF--DLMK-LFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHH--HHHH-HHHHHCCTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHH--HHHH-HHHhcCCCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 57999999998542 2222 233333556789999999999 5777777655 24799999999976
No 52
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.73 E-value=1.3e-06 Score=75.57 Aligned_cols=165 Identities=13% Similarity=0.041 Sum_probs=92.2
Q ss_pred CeEEEEeeccCCCCCC--------CC--hHHHHHhhc----CCCccE-EEEcCCCCC------------hHHHHHHHhcC
Q psy10859 1 MLVLVLGDLHIPHRTS--------GL--PAKFKKLLV----PGRIQH-ILCTGNLVT------------KETFDYLKTLA 53 (224)
Q Consensus 1 mki~~isDiH~~~~~~--------~~--~~~l~~~~~----~~~~D~-vi~~GDl~~------------~~~~~~l~~l~ 53 (224)
|+|++++|+|+..... .+ .+.+...++ ++++|. ++.+||+++ ...++.|+.++
T Consensus 16 l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~lg 95 (557)
T 3c9f_A 16 INFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQD 95 (557)
T ss_dssp EEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTSC
T ss_pred EEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhcC
Confidence 5899999999853211 11 122333332 356774 689999997 14577888887
Q ss_pred CcEEEecCCCCCCC---------------CCC--------------------cceEEEe--CCEEEEeeecCcccCCC--
Q psy10859 54 SDVHVVRGDFDEGT---------------SYP--------------------EKKVVTV--GQFRIGLCHGHDIIPWG-- 94 (224)
Q Consensus 54 ~~v~~v~GNHD~~~---------------~~~--------------------~~~~~~~--~~~~~~~~~g~~~~~~~-- 94 (224)
.. +++.||||+.. .++ ...+++. +|.++.++.=. .++.
T Consensus 96 ~D-a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt--~~~~~~ 172 (557)
T 3c9f_A 96 YD-LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL--FDFKRF 172 (557)
T ss_dssp CS-EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC--CCCCCC
T ss_pred CC-EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEee--cCCCCC
Confidence 55 56789999863 110 1124566 78887654211 1111
Q ss_pred -------CHHH--H-HHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCCCHHHH-HHHhhh-cCCcE-EEECCCCCC
Q psy10859 95 -------DPEA--L-ALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEAL-ALLQRQ-LDVDI-LISGHTHKF 161 (224)
Q Consensus 95 -------~~~~--~-~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~~~~~l-~~~~~~-~~~~~-vi~GH~H~~ 161 (224)
++.. . +++++. ..+..+..|+++|............. ..+++. .++++ ++.||+|..
T Consensus 173 ~~~~~~~d~~e~i~~~~v~~l----------~~~~~D~IIvL~H~G~~~~~d~~~~~~~~lA~~~~giDilIlgGHtH~~ 242 (557)
T 3c9f_A 173 NSGTRVTPMAETIHEPWFQEA----------LKHEVDLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIR 242 (557)
T ss_dssp CTTEEECCHHHHTTSHHHHHH----------TTSCCSEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCE
T ss_pred CCCcEECCHHHHHHHHHHHHH----------HhcCCCEEEEecccCccccCccccHHHHHHHHhCCCCCEEEECCCCCCC
Confidence 1110 1 122210 01224567889996532011111111 223332 58894 999999998
Q ss_pred ceE-EEcCEEEEcCCCCC
Q psy10859 162 EAY-EHENKFYINPGSAT 178 (224)
Q Consensus 162 ~~~-~~~~~~~in~Gs~~ 178 (224)
... ..++++++.+|+.+
T Consensus 243 ~~~~~~~~t~ivqaG~~g 260 (557)
T 3c9f_A 243 DFTVFDSLSTGLQSGRYC 260 (557)
T ss_dssp EEEEEETTEEEEEECSTT
T ss_pred CcceecCCeEeeeccchh
Confidence 543 34778888888877
No 53
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=98.67 E-value=8e-07 Score=76.54 Aligned_cols=66 Identities=15% Similarity=0.243 Sum_probs=42.2
Q ss_pred CeEEEEeeccCCCCCC---------------CCh--HHHHHhhcCCCcc-EEEEcCCCCC----------hHHHHHHHhc
Q psy10859 1 MLVLVLGDLHIPHRTS---------------GLP--AKFKKLLVPGRIQ-HILCTGNLVT----------KETFDYLKTL 52 (224)
Q Consensus 1 mki~~isDiH~~~~~~---------------~~~--~~l~~~~~~~~~D-~vi~~GDl~~----------~~~~~~l~~l 52 (224)
++|++++|+|+..... .+. ..+.+.+++++++ +++.+||++. ...++.|+.+
T Consensus 4 LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~l 83 (530)
T 4h1s_A 4 LTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNAL 83 (530)
T ss_dssp EEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHT
T ss_pred EEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhcc
Confidence 3699999999743210 011 1122223333444 6778999998 4677888888
Q ss_pred CCcEEEecCCCCCCC
Q psy10859 53 ASDVHVVRGDFDEGT 67 (224)
Q Consensus 53 ~~~v~~v~GNHD~~~ 67 (224)
+.. ..+.||||+..
T Consensus 84 gyD-a~~lGNHEFd~ 97 (530)
T 4h1s_A 84 RYD-AMALGNHEFDN 97 (530)
T ss_dssp TCC-EEECCGGGGTT
T ss_pred CCC-EEEEchhhhcc
Confidence 644 57899999764
No 54
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=98.59 E-value=8.5e-07 Score=68.85 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=87.6
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcCCCCC------hHHHHHHHhcCCcEEEecCCCCCCC-------
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTGNLVT------KETFDYLKTLASDVHVVRGDFDEGT------- 67 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~------~~~~~~l~~l~~~v~~v~GNHD~~~------- 67 (224)
|||++++|+=+......+.+.+.+ ++++. |+++..|+-.. ...++.|+.++..+. ..|||++..
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~-lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~Da~-TlGNHefD~~~l~~~l 77 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPT-IRPQF-DFVIVNMENSAGGFGMHRDAARGALEAGAGCL-TLGNHAWHHKDIYPML 77 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHH-HGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTCSEE-ECCTTTTSSTTHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHH-HHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCCCEE-EeccccccCchHHHHH
Confidence 999999999642211122222333 34444 99888776653 678888999887775 559999763
Q ss_pred -----------CCC-c------ceEEEeCCEEEEeee--cCcccCCCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEee
Q psy10859 68 -----------SYP-E------KKVVTVGQFRIGLCH--GHDIIPWGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLC 127 (224)
Q Consensus 68 -----------~~~-~------~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~ 127 (224)
+++ . ...++.+|.++.++. |....+...... +..++.+ ..+ ..+..|+.+
T Consensus 78 ~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~-~~~~~~v--~~l-------~~d~IIv~~ 147 (255)
T 1t70_A 78 SEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPF-RTMDALL--ERD-------DLGTVFVDF 147 (255)
T ss_dssp HTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHH-HHHHHHT--TCS-------SCCEEEEEE
T ss_pred hhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHH-HHHHHHH--HHh-------CCCEEEEEe
Confidence 222 1 135667787776543 332222111111 1222222 111 345678899
Q ss_pred ccCCCCCCCCHHHHHHHhhh--cCCcEEEECCCCCCceE-E-E-cCEEEEc
Q psy10859 128 HGHDIIPWGDPEALALLQRQ--LDVDILISGHTHKFEAY-E-H-ENKFYIN 173 (224)
Q Consensus 128 H~~~~~~~~~~~~l~~~~~~--~~~~~vi~GH~H~~~~~-~-~-~~~~~in 173 (224)
|+.. ..+. ..+.+. -++|+++.||+|.+... + . +++.|+.
T Consensus 148 H~e~-----t~Ek-~~la~~~dg~vd~VvGgHTHv~~~d~~il~~gt~~i~ 192 (255)
T 1t70_A 148 HAEA-----TSEK-EAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQT 192 (255)
T ss_dssp ECSC-----HHHH-HHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEES
T ss_pred CCCC-----hHHH-HHHHHhCCCCeEEEEeCCCCcCCCceEEcCCCeEEEE
Confidence 9532 1222 123322 25999999999998653 2 2 7877765
No 55
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=79.75 Aligned_cols=180 Identities=16% Similarity=0.221 Sum_probs=102.6
Q ss_pred eEEEEeeccCCCCCCC---ChHHHHHhhc-----------CCCccEEEEcCCCCCh-----------------------H
Q psy10859 2 LVLVLGDLHIPHRTSG---LPAKFKKLLV-----------PGRIQHILCTGNLVTK-----------------------E 44 (224)
Q Consensus 2 ki~~isDiH~~~~~~~---~~~~l~~~~~-----------~~~~D~vi~~GDl~~~-----------------------~ 44 (224)
+++++||+|.+..... -.+.|.+.+. ..++..||++||+++. +
T Consensus 202 ~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~~ 281 (476)
T 3e0j_A 202 FVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVE 281 (476)
T ss_dssp EEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHHHH
T ss_pred EEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhhHH
Confidence 6899999998654211 1124455443 2358999999999971 1
Q ss_pred HHH----HHHhc--CCcEEEecCCCCCCC-C----------------------CCcceEEEeCCEEEEeeecCccc---C
Q psy10859 45 TFD----YLKTL--ASDVHVVRGDFDEGT-S----------------------YPEKKVVTVGQFRIGLCHGHDII---P 92 (224)
Q Consensus 45 ~~~----~l~~l--~~~v~~v~GNHD~~~-~----------------------~~~~~~~~~~~~~~~~~~g~~~~---~ 92 (224)
.++ +|.++ ..||.++|||||... . ...++.++++|+++.+.+|+.+. .
T Consensus 282 ~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqnidDi~k 361 (476)
T 3e0j_A 282 AVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFR 361 (476)
T ss_dssp HHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHHHHHHHH
T ss_pred HHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCCHHHHHh
Confidence 122 23333 579999999999764 1 12345788999999998885421 1
Q ss_pred CC-CHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeeccCCCCCCC---CHH-HHHHHhhhcCCcEEEECCCCCCceEEEc
Q psy10859 93 WG-DPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHGHDIIPWG---DPE-ALALLQRQLDVDILISGHTHKFEAYEHE 167 (224)
Q Consensus 93 ~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~~~~~~~~---~~~-~l~~~~~~~~~~~vi~GH~H~~~~~~~~ 167 (224)
+. ....+..++.-|. --|..|..|.. -+. .-..+.-..-++++++||.|......+.
T Consensus 362 y~~~~~~l~~me~~Lk------------------wrHlAPTaPdTl~~yP~~~~DpfVi~~~PhVyf~Gnq~~f~t~~~~ 423 (476)
T 3e0j_A 362 YSSMEDHLEILEWTLR------------------VRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIR 423 (476)
T ss_dssp HSCCCCHHHHHHHHHH------------------BTCSCTTSCCC------CCSCTTSCSSCCSEEEEEEESSCEEEEEE
T ss_pred cCCCCCHHHHHHHHHH------------------HhccCCCCCCceeeccCCCCCceeecCCCcEEEeCCCCccceeEEe
Confidence 11 1112233333221 12223322210 010 0011122446899999999998776542
Q ss_pred -----CEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeEEEEEEE
Q psy10859 168 -----NKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNVVTYVYQ 208 (224)
Q Consensus 168 -----~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 208 (224)
.++.++..+++. .+..++++++.-+...--++
T Consensus 424 ~~~~~~vrLv~VP~Fs~---------T~~~vLvdl~tLe~~~v~f~ 460 (476)
T 3e0j_A 424 GPEDQTVLLVTVPDFSA---------TQTACLVNLRSLACQPISFS 460 (476)
T ss_dssp CSSCCEEEEEEEECHHH---------HCEEEEEETTTTBCCEEEEE
T ss_pred cCCCCeEEEEEcCCcCC---------CCeEEEEECccccEEEEEEe
Confidence 356666666663 46788888887655443333
No 56
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.44 E-value=6.4e-06 Score=63.68 Aligned_cols=153 Identities=18% Similarity=0.263 Sum_probs=87.5
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcC-CCCC-----hHHHHHHHhcCCcEEEecCCCCCCC-------
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTG-NLVT-----KETFDYLKTLASDVHVVRGDFDEGT------- 67 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~G-Dl~~-----~~~~~~l~~l~~~v~~v~GNHD~~~------- 67 (224)
|||++++|+=+......+.+.+.++ +++. |++++.| |.+. ...++.|.+++..+. ..|||++..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~l-r~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~D~~-T~GNHefD~~~l~~~l 77 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDI-RDRY-DLVIANGENAARGKGLDRRSYRLLREAGVDLV-SLGNHAWDHKEVYALL 77 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHH-GGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTSCTTHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHH-HhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCCCEE-EeccEeeECchHHHHh
Confidence 9999999996522211222333443 4445 8877655 5444 788888999988875 669999663
Q ss_pred ---------CCCc------ceEEEeCCEEEEeee--cCcccC-CCCHHHHHHHHHhhcCCCCCCceeeeeCCeEEEeecc
Q psy10859 68 ---------SYPE------KKVVTVGQFRIGLCH--GHDIIP-WGDPEALALLQRQLDGTSYPEKKVVTVGQFRIGLCHG 129 (224)
Q Consensus 68 ---------~~~~------~~~~~~~~~~~~~~~--g~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~~H~ 129 (224)
+++. ...++.+|.++.++. |....+ ...+ .. ..++.+. .+ + .+..|+.+|.
T Consensus 78 ~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~p-f~-~~~~~v~--~l------k-~d~IIv~~H~ 146 (252)
T 2z06_A 78 ESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDP-FR-ALDRLLE--EE------K-ADYVLVEVHA 146 (252)
T ss_dssp HHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCH-HH-HHHHHHH--HC------C-CSEEEEEEEC
T ss_pred ccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCH-HH-HHHHHHH--Hh------C-CCEEEEEeCC
Confidence 2332 135777888887543 433332 2222 11 1222111 11 1 5677889995
Q ss_pred CCCCCCCCHHHHHHHhh--hcCCcEEEECCCCCCceE--EE-cCEEEEc
Q psy10859 130 HDIIPWGDPEALALLQR--QLDVDILISGHTHKFEAY--EH-ENKFYIN 173 (224)
Q Consensus 130 ~~~~~~~~~~~l~~~~~--~~~~~~vi~GH~H~~~~~--~~-~~~~~in 173 (224)
.. ..+. ..+.. .-++|+++.||+|.+... .. +++.|+.
T Consensus 147 g~-----tsek-~~la~~~dg~Vd~VvGgHTHv~t~d~~il~~gt~~it 189 (252)
T 2z06_A 147 EA-----TSEK-MALAHYLDGRASAVLGTHTHVPTLDATRLPKGTLYQT 189 (252)
T ss_dssp SC-----HHHH-HHHHHHHBTTBSEEEEESSCSCBSCCEECTTSCEEES
T ss_pred Cc-----HHHH-HHHHHhCCCCeEEEEcCCCCcCCCccEEcCCCcEeec
Confidence 31 1221 12222 235999999999998643 23 6666654
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.002 Score=53.90 Aligned_cols=50 Identities=24% Similarity=0.263 Sum_probs=40.5
Q ss_pred hcCCcEEEECCCCCCceEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCe
Q psy10859 147 QLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSN 201 (224)
Q Consensus 147 ~~~~~~vi~GH~H~~~~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~ 201 (224)
...+|++|..-.-.++...++++.+||||.+..+ ..+.++|+.+.+..-.
T Consensus 380 ~~~PDilI~PS~l~~F~kvv~~~v~INPG~l~k~-----~~g~GTya~l~i~~~~ 429 (460)
T 3flo_A 380 GFSPDIMIIPSELQHFARVVQNVVVINPGRFIRA-----TGNRGSYAQITVQCPD 429 (460)
T ss_dssp GCCCSEEECCCSSCCEEEEETTEEEEECCCSBCT-----TSCBCEEEEEEECCCC
T ss_pred CCCCCEEEcCCCCcCceEEeCCEEEECcccccCC-----CCCCceeEEEEEeCCc
Confidence 3468999999999999999999999999999832 1225899999997543
No 58
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=88.91 E-value=0.56 Score=31.07 Aligned_cols=64 Identities=11% Similarity=0.118 Sum_probs=43.2
Q ss_pred CeEEEEeeccCC-------C------CCCCChHHHHHhhcCCCccEEEEcCCCCC--hHHHHHHH-hcCCc-EEEecCCC
Q psy10859 1 MLVLVLGDLHIP-------H------RTSGLPAKFKKLLVPGRIQHILCTGNLVT--KETFDYLK-TLASD-VHVVRGDF 63 (224)
Q Consensus 1 mki~~isDiH~~-------~------~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~-~l~~~-v~~v~GNH 63 (224)
||++++||--.- - ...+..++|.++++..++..|+++=++.+ ++.++.++ +...| ++-||+.|
T Consensus 4 mkiaVIgD~dtv~GFrLaGi~~~~v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~~~~~~P~Il~IPs~~ 83 (109)
T 2d00_A 4 VRMAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGRDLPVLLPIAGLK 83 (109)
T ss_dssp CCEEEEECHHHHHHHHHTTSEEEECSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHTTCCCCCEEEEESCGG
T ss_pred cEEEEEeCHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHHhCCCCeEEEEECCCc
Confidence 899999994320 0 00122345677666778999999999998 77777775 33345 56677777
Q ss_pred C
Q psy10859 64 D 64 (224)
Q Consensus 64 D 64 (224)
+
T Consensus 84 ~ 84 (109)
T 2d00_A 84 E 84 (109)
T ss_dssp G
T ss_pred c
Confidence 4
No 59
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, hydrolase; NMR {Methanosarcina mazei}
Probab=86.59 E-value=0.42 Score=31.18 Aligned_cols=63 Identities=13% Similarity=0.194 Sum_probs=42.3
Q ss_pred CeEEEEeeccC--------------CCCCCCChHHHHHhhcCCCccEEEEcCCCCC--hHHH-HHHHh-cCCcEEEecCC
Q psy10859 1 MLVLVLGDLHI--------------PHRTSGLPAKFKKLLVPGRIQHILCTGNLVT--KETF-DYLKT-LASDVHVVRGD 62 (224)
Q Consensus 1 mki~~isDiH~--------------~~~~~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~-~~l~~-l~~~v~~v~GN 62 (224)
||++++||--. -....+..++|.++++..++..++++=++.+ ++.+ +...+ ...-++.||+.
T Consensus 1 MkiaVIGD~dtv~GFrLaGi~~v~~v~~~ee~~~~~~~l~~~~digIIlite~~a~~i~~~i~~~~~~~~~P~Iv~IP~~ 80 (101)
T 2ov6_A 1 MELAVIGKSEFVTGFRLAGISKVYETPDIPATESAVRSVLEDKSVGILVMHNDDIGNLPEVLRKNLNESVQPTVVALGGS 80 (101)
T ss_dssp CCEEEEECHHHHHHHHHHTCCEEEECCSTTTHHHHHHHHHHHTSSSEEEEEHHHHTTCTTTTHHHHHHHCCSCEEEECTT
T ss_pred CEEEEEECHHHHHHHHHcCCCceEecCCHHHHHHHHHHHhhCCCeEEEEEcHHHHHHhHHHHHHHHhCCCCcEEEEECCC
Confidence 89999999432 0111234456777777778999999998888 4444 55553 33347778888
Q ss_pred C
Q psy10859 63 F 63 (224)
Q Consensus 63 H 63 (224)
|
T Consensus 81 ~ 81 (101)
T 2ov6_A 81 G 81 (101)
T ss_dssp S
T ss_pred C
Confidence 8
No 60
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=74.56 E-value=0.71 Score=30.88 Aligned_cols=64 Identities=16% Similarity=0.189 Sum_probs=41.2
Q ss_pred CeEEEEeeccC--CCCC-----------CCChHHHHHhhcCCCccEEEEcCCCCC--hHHHHHHHhcCCc-EEEecCCCC
Q psy10859 1 MLVLVLGDLHI--PHRT-----------SGLPAKFKKLLVPGRIQHILCTGNLVT--KETFDYLKTLASD-VHVVRGDFD 64 (224)
Q Consensus 1 mki~~isDiH~--~~~~-----------~~~~~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l~~~-v~~v~GNHD 64 (224)
||+++|||--. +.+. .+..++|.++++. ++..|+++=++.+ ++.++.+++...| ++-||+.|-
T Consensus 3 mKiaVIGD~Dtv~GFrLaGie~~~v~~~ee~~~~~~~l~~~-digIIlIte~ia~~i~~~i~~~~~~~~P~IveIPs~~g 81 (115)
T 3aon_B 3 YKIGVVGDKDSVSPFRLFGFDVQHGTTKTEIRKTIDEMAKN-EYGVIYITEQCANLVPETIERYKGQLTPAIILIPSHQG 81 (115)
T ss_dssp EEEEEESCHHHHGGGGGGTCEEECCCSHHHHHHHHHHHHHT-TEEEEEEEHHHHTTCHHHHHHHHTSSSCEEEEECBTTB
T ss_pred eEEEEEECHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhc-CceEEEEeHHHHHHhHHHHHHHhCCCCCEEEEECCCCC
Confidence 69999999432 1110 0122356666656 8999999998888 6677777754345 556777663
Q ss_pred C
Q psy10859 65 E 65 (224)
Q Consensus 65 ~ 65 (224)
.
T Consensus 82 ~ 82 (115)
T 3aon_B 82 T 82 (115)
T ss_dssp C
T ss_pred C
Confidence 3
No 61
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=59.93 E-value=48 Score=24.95 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHhhcCCCccEEEEcCCC-CC----hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNL-VT----KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl-~~----~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
.+.++ .+.+.|++++.|.. +. .++++.+++...|++..+||.+..
T Consensus 28 ~l~~~-~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~~~~Piil~p~~~~~~ 77 (235)
T 3w01_A 28 DLDAI-CMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESV 77 (235)
T ss_dssp HHHHH-HTSSCSEEEECCSSCCCHHHHHHHHHHHTTSCSCEEEECCCSTTC
T ss_pred HHHHH-HHcCCCEEEECCcCCcCHHHHHHHHHHhcCcCCCEEEecCCHHHh
Confidence 44443 46789999999976 33 456666666567999999998765
No 62
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=57.44 E-value=17 Score=22.26 Aligned_cols=44 Identities=11% Similarity=0.066 Sum_probs=31.6
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHH----HhcCCcEEEecCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYL----KTLASDVHVVRGDFDE 65 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~v~~v~GNHD~ 65 (224)
...+.+++.++-+||++.|.-. +....+ +..+.|++.+.++-+.
T Consensus 18 ~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~sk~eL 65 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVESMKKL 65 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 4566677888999999999876 333333 3447899999876543
No 63
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=57.10 E-value=26 Score=22.24 Aligned_cols=43 Identities=23% Similarity=0.163 Sum_probs=29.1
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHH----HhcCCcEEEecCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYL----KTLASDVHVVRGDFD 64 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~v~~v~GNHD 64 (224)
...+.+++.++-+||++.| ...+....+ +..+.|++...++-+
T Consensus 22 ~v~kai~~gka~lViiA~D-~~~~~~~~i~~~c~~~~ip~~~~~~s~~ 68 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKN-APKEIKDDIYYYAKLSDIPVYEFEGTSV 68 (99)
T ss_dssp HHHHHHHHTCCSEEEEECC-CCHHHHHHHHHHHHHTTCCEEEECCCSC
T ss_pred HHHHHHHcCCccEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEeCCCHH
Confidence 3455667778999999999 664444444 344789877745444
No 64
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=54.29 E-value=11 Score=30.67 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=30.2
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GN 62 (224)
.+.+++++.+||.|+..||....-..-.....++|++.+.++
T Consensus 85 ~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag 126 (385)
T 4hwg_A 85 KVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG 126 (385)
T ss_dssp HHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC
Confidence 456667788999999999987722233334557899988765
No 65
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=54.23 E-value=33 Score=22.58 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=34.6
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHH----HHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETF----DYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~----~~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.+++..+.+||++.|.-..+.. .+.+..+.|++++.+.-+..
T Consensus 32 ~v~kaI~~gka~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~LG 81 (113)
T 3jyw_G 32 HVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG 81 (113)
T ss_dssp HHHHTTTTTCCSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTTTH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 45667788899999999999774443 33455689999999977654
No 66
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=54.08 E-value=27 Score=22.25 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=28.6
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHHh----cCCcEEEe-cCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLKT----LASDVHVV-RGDFD 64 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~----l~~~v~~v-~GNHD 64 (224)
...+.+++.++-+||++.| ...+....+.. .+.|++.+ ..+-+
T Consensus 23 ~v~kai~~gka~lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~~~s~~e 70 (101)
T 1w41_A 23 KSIQYAKMGGAKLIIVARN-ARPDIKEDIEYYARLSGIPVYEFEGTSVE 70 (101)
T ss_dssp HHHHHHHHTCCSEEEEETT-SCHHHHHHHHHHHHHHTCCEEEESSCHHH
T ss_pred HHHHHHHcCCCcEEEEeCC-CCHHHHHHHHHHHHhcCCCEEEecCCHHH
Confidence 3455566778999999999 66555544443 37898876 44443
No 67
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=52.33 E-value=7.4 Score=27.15 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=22.0
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTG 38 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~G 38 (224)
|||++.|| |.+. ++.+.+.+.+++.+.+ |+-.|
T Consensus 2 MkIaigsD-haG~---~lK~~i~~~L~~~G~e-V~D~G 34 (149)
T 2vvr_A 2 KKIAFGCD-HVGF---ILKHEIVAHLVERGVE-VIDKG 34 (149)
T ss_dssp CEEEEEEC-TTGG---GGHHHHHHHHHHTTCE-EEECC
T ss_pred cEEEEEeC-chhH---HHHHHHHHHHHHCCCE-EEEeC
Confidence 89999999 7543 4556777777655553 44444
No 68
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=51.99 E-value=31 Score=22.36 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=28.0
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHH----hcCCcEEEecCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLK----TLASDVHVVRGD 62 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~v~~v~GN 62 (224)
...+.+++..+-+||++.|. ..+....+. ..++|++.+.++
T Consensus 28 ~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~~~s 72 (110)
T 3cpq_A 28 RTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQHKIT 72 (110)
T ss_dssp HHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEECCSC
T ss_pred HHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34556677889999999999 644444443 337898877443
No 69
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=50.71 E-value=25 Score=26.25 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=27.5
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (255)
T 3md9_A 57 AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPG 90 (255)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCC
Confidence 6799999987754446788999999999998863
No 70
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=49.75 E-value=26 Score=26.13 Aligned_cols=34 Identities=12% Similarity=0.092 Sum_probs=27.5
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (256)
T 2r7a_A 57 SLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPR 90 (256)
T ss_dssp TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECC
T ss_pred ccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecC
Confidence 5789999987654457889999999989988864
No 71
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=49.10 E-value=26 Score=26.79 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=25.2
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..||+||++.=.-+...+.....+++|++.+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaiv 188 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALA 188 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEe
Confidence 47999999886666778888888888986553
No 72
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=48.68 E-value=40 Score=25.25 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=32.5
Q ss_pred HHHHhhcCCCccEEEEcCCC-CC----hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNL-VT----KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl-~~----~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
.+.++ .+.+.|++++.|=. +. .++++.+++...|++..|||.+..
T Consensus 23 ~~~~~-~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~~v 72 (228)
T 3vzx_A 23 QLEIL-CESGTDAVIIGGSDGVTEDNVLRMMSKVRRFLVPCVLEVSAIEAI 72 (228)
T ss_dssp HHHHH-HTSSCSEEEECCCSCCCHHHHHHHHHHHTTSSSCEEEECSCGGGC
T ss_pred HHHHH-HHcCCCEEEECCcCCCCHHHHHHHHHHhhccCCCEEEeCCCHHHc
Confidence 34443 46789999999965 32 455566666578999999998764
No 73
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=46.05 E-value=36 Score=22.82 Aligned_cols=46 Identities=4% Similarity=-0.073 Sum_probs=31.9
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHH----HHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETF----DYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~----~~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.+++.++-+||++.|.-..+.. .+.+..++|++++.++.+..
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG 80 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLG 80 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 34555667789999999998653333 33344478999998877654
No 74
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=44.18 E-value=34 Score=26.04 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=27.2
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
..+||+||..+.....+.++.|++++.|++.+..
T Consensus 57 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 90 (283)
T 2r79_A 57 ALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSA 90 (283)
T ss_dssp TTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCC
T ss_pred hcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecC
Confidence 5789999987654457888999999889988753
No 75
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=43.32 E-value=54 Score=20.82 Aligned_cols=44 Identities=14% Similarity=0.027 Sum_probs=29.8
Q ss_pred HHHHhhcCCCccEEEEcCCCCCh---HHHHHHHhcCCcEEEecCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTK---ETFDYLKTLASDVHVVRGDFD 64 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~---~~~~~l~~l~~~v~~v~GNHD 64 (224)
...+.+++..+-+||++.|.-.. ......+..+.|++.+..+-|
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e 72 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV 72 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH
Confidence 45566778889999999998872 332333445789888844443
No 76
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=43.02 E-value=6.3 Score=27.51 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=21.8
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTG 38 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~G 38 (224)
|||++-|| |.+. ++.+.+.+.+++.+.+ |+-.|
T Consensus 1 MkI~igsD-haG~---~lK~~i~~~L~~~G~e-V~D~G 33 (149)
T 3he8_A 1 MKIGIGSD-HGGY---NLKREIADFLKKRGYE-VIDFG 33 (149)
T ss_dssp CEEEEEEC-GGGH---HHHHHHHHHHHHTTCE-EEECC
T ss_pred CEEEEEEC-chhH---HHHHHHHHHHHHCCCE-EEEcC
Confidence 99999999 6543 4456677777655554 44455
No 77
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=42.56 E-value=39 Score=22.35 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=32.6
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHH----HHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFD----YLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~----~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.+++..+-+||++.|.-..+... ..+..++|++++.++-+..
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG 76 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLG 76 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHH
Confidence 345556677899999999988744333 3444588999988776643
No 78
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=42.01 E-value=56 Score=24.87 Aligned_cols=46 Identities=13% Similarity=0.193 Sum_probs=35.3
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHH----HhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYL----KTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l----~~l~~~v~~v~GNHD~~ 66 (224)
.....++...+.+||+++|.-..+.+..| ++.++|+++|.|.-+..
T Consensus 131 eVtKaIekgKAqLVVIA~DvdPielv~~LPaLCee~~VPY~~V~sK~~LG 180 (255)
T 4a17_F 131 HITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGKAALG 180 (255)
T ss_dssp HHHHHHHTSCCSEEEEESCCSSTHHHHHHHHHHHHTTCCEEEESCHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHcCCCEEEECCHHHHH
Confidence 45666778889999999999875555444 55689999999877654
No 79
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=41.72 E-value=47 Score=21.71 Aligned_cols=46 Identities=20% Similarity=0.089 Sum_probs=30.9
Q ss_pred HHHHhhcCCCccEEEEcCCCCC---hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVT---KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.+++..+-+||++.|.-. .++.......++|++.+.|+-+..
T Consensus 33 ~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eL 81 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDL 81 (112)
T ss_dssp HHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHH
Confidence 3455567788999999999865 222223334478999887766543
No 80
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=41.04 E-value=56 Score=22.03 Aligned_cols=15 Identities=27% Similarity=0.279 Sum_probs=7.6
Q ss_pred HHHhcCCcEEEecCC
Q psy10859 48 YLKTLASDVHVVRGD 62 (224)
Q Consensus 48 ~l~~l~~~v~~v~GN 62 (224)
.++...+||.+++..
T Consensus 146 vl~~~~~pVlvv~~~ 160 (162)
T 1mjh_A 146 VIKKSNKPVLVVKRK 160 (162)
T ss_dssp HHHHCCSCEEEECCC
T ss_pred HHHhCCCCEEEEeCC
Confidence 344445555555543
No 81
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=39.67 E-value=35 Score=25.24 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=25.7
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..+||+||....-...+.++.|++++.|++.+.
T Consensus 55 ~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 87 (245)
T 1n2z_A 55 ALKPDLVIAWRGGNAERQVDQLASLGIKVMWVD 87 (245)
T ss_dssp HTCCSEEEECTTTSCHHHHHHHHHHTCCEEECC
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeC
Confidence 468999998543345778899999998998764
No 82
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=38.93 E-value=7.9 Score=27.49 Aligned_cols=28 Identities=18% Similarity=0.093 Sum_probs=15.3
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCcc
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQ 32 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D 32 (224)
|||++-|| |.+. ++.+.+.+.+++.+.+
T Consensus 22 MkIaIgsD-haG~---~lK~~i~~~L~~~G~e 49 (166)
T 3s5p_A 22 MKVAFASD-HGGR---DLRMFLQQRASAHGYE 49 (166)
T ss_dssp CEEEEEEC-GGGH---HHHHHHHHHHHHTTCE
T ss_pred eEEEEEEC-chHH---HHHHHHHHHHHHCCCE
Confidence 67777777 5432 3344555555544443
No 83
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=38.75 E-value=8 Score=27.56 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=18.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTG 38 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~G 38 (224)
|||++.|| |.+. ++.+.+.+.+++.+.+ |+-.|
T Consensus 21 MkIaIgsD-haG~---~lK~~i~~~L~~~G~e-V~D~G 53 (169)
T 3ph3_A 21 MKIGIGSD-HGGY---NLKREIADFLKKRGYE-VIDFG 53 (169)
T ss_dssp CEEEEEEC-GGGH---HHHHHHHHHHHHTTCE-EEECC
T ss_pred CEEEEEeC-chHH---HHHHHHHHHHHHCCCE-EEEcC
Confidence 78888888 5433 3445566666555544 33444
No 84
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=37.16 E-value=54 Score=25.58 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=24.0
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..||+||++.=..+...+..-+++++|++.+.
T Consensus 117 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalv 148 (295)
T 2zkq_b 117 REPRLLVVTDPRADHQPLTEASYVNLPTIALC 148 (295)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHHTCCEEEEE
T ss_pred cCCCeEEEeCCCcchhHHHHHHHhCCCEEEEe
Confidence 46999998865566777777888888886553
No 85
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=36.89 E-value=45 Score=25.88 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=28.1
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCC
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDF 63 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNH 63 (224)
..+||+||..+. ...+.++.|+++++|++++....
T Consensus 82 ~l~PDlIi~~~~-~~~~~~~~L~~~Gipvv~~~~~~ 116 (326)
T 3psh_A 82 ALKPDVVFVTNY-APSEMIKQISDVNIPVVAISLRT 116 (326)
T ss_dssp HTCCSEEEEETT-CCHHHHHHHHTTTCCEEEECSCC
T ss_pred ccCCCEEEEeCC-CChHHHHHHHHcCCCEEEEeccc
Confidence 468999998753 35778899999999999997654
No 86
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=36.18 E-value=43 Score=22.70 Aligned_cols=45 Identities=16% Similarity=0.063 Sum_probs=30.7
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHH----HHHHhcCCcEEEecCCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETF----DYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~----~~l~~l~~~v~~v~GNHD~~ 66 (224)
..+.+++.++-+||++.|.-..+.. ...++.+.|++++.++-+..
T Consensus 40 v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG 88 (134)
T 2ale_A 40 ATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALG 88 (134)
T ss_dssp HHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 3445566789999999998774333 34444588998887766543
No 87
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=36.09 E-value=50 Score=24.98 Aligned_cols=32 Identities=6% Similarity=-0.046 Sum_probs=24.0
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..||+||++.=.-+...+..-+++++|++.+.
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalv 144 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALC 144 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECC
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEe
Confidence 46999999854455777778888889987664
No 88
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=35.95 E-value=82 Score=20.62 Aligned_cols=45 Identities=11% Similarity=-0.019 Sum_probs=30.0
Q ss_pred HHHHhhcCCCccEEEEcCCCCChH----HHHHHHhcCCcEEEecCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKE----TFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~----~~~~l~~l~~~v~~v~GNHD~ 65 (224)
...+.+++..+-+||++.|.-..+ +....+..+.|++++..+-+.
T Consensus 34 ~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eL 82 (119)
T 1rlg_A 34 ETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDL 82 (119)
T ss_dssp HHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCCHHHH
Confidence 345556777899999999986532 333334447898777766654
No 89
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=35.70 E-value=58 Score=20.61 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=29.4
Q ss_pred HHHHhhcCCCccEEEEcCCCCCh---HHHHHHHhcCCcEEEecCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTK---ETFDYLKTLASDVHVVRGDFD 64 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~---~~~~~l~~l~~~v~~v~GNHD 64 (224)
...+.+++.++-+||++.|.-.. .+....+..+.|++.+..+-|
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e 71 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM 71 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH
Confidence 45566677889999999998872 222333344789887754444
No 90
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=35.34 E-value=61 Score=24.69 Aligned_cols=32 Identities=3% Similarity=-0.044 Sum_probs=24.2
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..||+||++.=..+...+..-+++++|++.+.
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalv 181 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALC 181 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEE
Confidence 46999998855455777888888899987664
No 91
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=35.20 E-value=9.7 Score=26.52 Aligned_cols=28 Identities=18% Similarity=0.052 Sum_probs=16.1
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCcc
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQ 32 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D 32 (224)
|||++-|| |.+. ++.+.+.+.+++.+.+
T Consensus 8 mkI~igsD-haG~---~lK~~i~~~L~~~G~e 35 (148)
T 4em8_A 8 KRVFLSSD-HAGV---ELRLFLSAYLRDLGCE 35 (148)
T ss_dssp SEEEEEEC-GGGH---HHHHHHHHHHHHTTCE
T ss_pred eEEEEEEC-chhH---HHHHHHHHHHHHCCCE
Confidence 67888888 6433 3344566665544443
No 92
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=34.45 E-value=39 Score=25.99 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=30.8
Q ss_pred CCcEEEECCCCCCc-eEEEcCEEEEcCCCCCCCCCCCCCCCCCeEEEEEEeCCeE
Q psy10859 149 DVDILISGHTHKFE-AYEHENKFYINPGSATGAFNPLEPKVNPSFVLMDIQSSNV 202 (224)
Q Consensus 149 ~~~~vi~GH~H~~~-~~~~~~~~~in~Gs~~~~~~~~~~~~~~~~~~i~~~~~~~ 202 (224)
....+++||+-... ....+++..+.+|++-+ +.-+.+.++++++
T Consensus 219 ~~~~vv~GHt~~~~g~~~~~~~i~iDTG~v~g----------G~Ltal~l~~~~~ 263 (280)
T 2dfj_A 219 EEYSIAFGHWASLEGKGTPEGIYALDTGCCWG----------GSLTCLRWEDKQY 263 (280)
T ss_dssp TTSEEEECCCGGGTTCSCCTTEEECCCCTTTT----------SEEEEEETTTTEE
T ss_pred CCceEEECCcccccCccccCCEEEeecccccC----------CEEEEEEeCCCcE
Confidence 45689999998642 22347788999998752 4667777777644
No 93
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=34.36 E-value=14 Score=26.64 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=19.9
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcC--CCccEEEEcC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVP--GRIQHILCTG 38 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~--~~~D~vi~~G 38 (224)
|||++.|| |.+. ++.+.+.+.+++ .+.+ |+-.|
T Consensus 23 MkIaIgsD-haG~---~lK~~i~~~L~~~~~G~e-V~D~G 57 (179)
T 3k7p_A 23 RRVAIGTD-HPAF---AIHENLILYVKEAGDEFV-PVYCG 57 (179)
T ss_dssp EEEEEEEC-TGGG---GGHHHHHHHHHHTCTTEE-EEECS
T ss_pred eEEEEEEC-chHH---HHHHHHHHHHHhcCCCCe-EEEcC
Confidence 68888888 6543 445566666654 4443 44444
No 94
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=34.08 E-value=54 Score=21.70 Aligned_cols=14 Identities=36% Similarity=0.261 Sum_probs=6.4
Q ss_pred HHhcCCcEEEecCC
Q psy10859 49 LKTLASDVHVVRGD 62 (224)
Q Consensus 49 l~~l~~~v~~v~GN 62 (224)
++...+||.+|+.+
T Consensus 135 l~~~~~pVlvv~~~ 148 (150)
T 3tnj_A 135 LHYAKCDVLAVRLR 148 (150)
T ss_dssp HHHCSSEEEEEECC
T ss_pred HHhCCCCEEEEeCC
Confidence 33334455555443
No 95
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.46 E-value=63 Score=23.66 Aligned_cols=31 Identities=3% Similarity=0.026 Sum_probs=22.7
Q ss_pred CccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 30 RIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 30 ~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
.||+++++.=..+...+..-+.++.|++.+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~ 141 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALV 141 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEE
Confidence 6899999855555677777777888887543
No 96
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=32.79 E-value=28 Score=28.28 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=27.7
Q ss_pred HHHHhhcCCCccEEEEcCCCCChH-HHHHHHhcCCcEEEecC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKE-TFDYLKTLASDVHVVRG 61 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~v~~v~G 61 (224)
.+.+++++.+||.|++.||....- ..-.....++|++.+.+
T Consensus 105 ~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~a 146 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEA 146 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 455666788999999999976521 12233345789888765
No 97
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=32.28 E-value=79 Score=24.05 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=33.8
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHH----hcCCcEEEecCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLK----TLASDVHVVRGDFDE 65 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~v~~v~GNHD~ 65 (224)
.....++...+.+|+++.|.--.+.+..|- +.+.|.++|.|--+.
T Consensus 134 eVTklVE~kKAqLVVIA~DVdPiElV~fLPaLC~k~gVPY~iVk~KarL 182 (258)
T 3iz5_H 134 HVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARL 182 (258)
T ss_dssp HHHHHHHTTCEEEEEEESCCSSTHHHHHHHHHHTTTTCCEEEESCHHHH
T ss_pred HHHHHHHcCcceEEEEeCCCChHHHHhHHHHHHHhcCCCeEEECCHHHH
Confidence 455567788899999999987766665544 447899999986654
No 98
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=31.78 E-value=32 Score=28.29 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=10.8
Q ss_pred ECCCCCCceEEEcC-EEEEcCCCCCC
Q psy10859 155 SGHTHKFEAYEHEN-KFYINPGSATG 179 (224)
Q Consensus 155 ~GH~H~~~~~~~~~-~~~in~Gs~~~ 179 (224)
+||+|.-...+-.. +.++|+||.+.
T Consensus 6 ~~~~~gm~~~Ms~klILviN~GSSS~ 31 (415)
T 3sk3_A 6 HHHHHGMASHMSSKLVLVLNCGSSSL 31 (415)
T ss_dssp ------------CCEEEEEEECSSCE
T ss_pred ccccccccccCCCCeEEEEeCchHhh
Confidence 45666544444444 68999999995
No 99
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=31.76 E-value=73 Score=24.22 Aligned_cols=31 Identities=6% Similarity=0.008 Sum_probs=23.5
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEe
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVV 59 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v 59 (224)
..||+||++.=..+...+..-+.+++|++.+
T Consensus 116 ~~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial 146 (252)
T 3u5c_A 116 KEPRLVIVTDPRSDAQAIKEASYVNIPVIAL 146 (252)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHTTTCCEEEE
T ss_pred cCCceEEEeCCccchHHHHHHHHcCCCEEEE
Confidence 4689999986555677777778888888754
No 100
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=31.65 E-value=64 Score=24.20 Aligned_cols=41 Identities=5% Similarity=0.054 Sum_probs=28.9
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
.+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-.
T Consensus 57 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 97 (288)
T 3gv0_A 57 PIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHGR 97 (288)
T ss_dssp HHHHHHHHTCCSEEEEESCCTTCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHcCCccEEEEecCCCCcHHHHHHhhCCCCEEEECC
Confidence 44454556789999998744445677888877889876643
No 101
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=31.56 E-value=89 Score=20.63 Aligned_cols=44 Identities=9% Similarity=-0.092 Sum_probs=29.5
Q ss_pred HHHhhcCCCccEEEEcCCCCChH----HHHHHHhcCCcEEEecCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKE----TFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~----~~~~l~~l~~~v~~v~GNHD~ 65 (224)
..+.+++..+-+||++.|.-..+ +....+..+.|++++..+-+.
T Consensus 36 v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eL 83 (124)
T 2fc3_A 36 TTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRL 83 (124)
T ss_dssp HHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHH
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHH
Confidence 44556677899999999987633 233334447798777766654
No 102
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=31.17 E-value=81 Score=23.20 Aligned_cols=32 Identities=6% Similarity=0.075 Sum_probs=24.7
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..||+++++.=.-+...+...+++++|++.+.
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalv 145 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALC 145 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEe
Confidence 36999999865555778888888899987775
No 103
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=30.71 E-value=85 Score=21.16 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=30.0
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHH----hcCCcEEEecCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLK----TLASDVHVVRGDFDE 65 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~----~l~~~v~~v~GNHD~ 65 (224)
..+.+++..+-+||++.|.-..+....+. ..+.|++++..+-+.
T Consensus 49 v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~eL 96 (135)
T 2aif_A 49 ATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVAL 96 (135)
T ss_dssp HHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHHH
T ss_pred HHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHHH
Confidence 34455677899999999998854444433 336898888655543
No 104
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=30.61 E-value=85 Score=23.62 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=29.2
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GN 62 (224)
+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-..
T Consensus 60 ~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~~~iPvV~i~~~ 100 (295)
T 3hcw_A 60 VYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKP 100 (295)
T ss_dssp HHHHHHTTCCSEEEESCCCTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHhCCcCEEEEcCcccChHHHHHHHhCCCCEEEECCC
Confidence 34444567899999987544566777788778898877443
No 105
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=30.61 E-value=88 Score=23.41 Aligned_cols=31 Identities=6% Similarity=-0.090 Sum_probs=24.4
Q ss_pred CccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 30 RIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 30 ~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
.||+||++.=.-+..++.....+++|++.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 5999999865555777788888899987764
No 106
>2ll1_A U1-TRTX-SP1A; toxin; NMR {Theraphosidae}
Probab=30.53 E-value=13 Score=17.67 Aligned_cols=9 Identities=33% Similarity=0.423 Sum_probs=6.9
Q ss_pred ECCCCCCce
Q psy10859 155 SGHTHKFEA 163 (224)
Q Consensus 155 ~GH~H~~~~ 163 (224)
|||.|.|..
T Consensus 2 cghlhdpcp 10 (33)
T 2ll1_A 2 CGHLHDPCP 10 (33)
T ss_dssp CBCSSCBCT
T ss_pred CcccCCCCC
Confidence 689998754
No 107
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=30.44 E-value=1.1e+02 Score=19.90 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=27.9
Q ss_pred HHHhhcCCCccEEEEcCCCCC---hHHHHHHHhc--CCcEEEecCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVT---KETFDYLKTL--ASDVHVVRGDFD 64 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l--~~~v~~v~GNHD 64 (224)
..+.++...+|.||+-=++-+ .+.++.+++. ..|++++-+..+
T Consensus 58 al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 58 AIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 344456677999988766665 4556666654 357777776554
No 108
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=30.28 E-value=1.1e+02 Score=19.83 Aligned_cols=9 Identities=11% Similarity=0.228 Sum_probs=4.3
Q ss_pred ccEEEEcCC
Q psy10859 31 IQHILCTGN 39 (224)
Q Consensus 31 ~D~vi~~GD 39 (224)
++..+..||
T Consensus 86 ~~~~~~~g~ 94 (146)
T 3s3t_A 86 LKTEISYGI 94 (146)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEecCC
Confidence 344555554
No 109
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=29.88 E-value=62 Score=21.81 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=25.7
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEe
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVV 59 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v 59 (224)
.+.+.+...++|.||+.| +....++.|++ ++.++..
T Consensus 70 ~~~~~L~~~gv~~VI~g~--iG~~a~~~L~~-GI~v~~~ 105 (136)
T 2re2_A 70 FMLKSALDHGANALVLSE--IGSPGFNFIKN-KMDVYIV 105 (136)
T ss_dssp HHHHHHHHTTCSEEEESC--CBHHHHHHHTT-TSEEEEC
T ss_pred HHHHHHHHcCCCEEEECC--CCHhHHHHHHC-CCEEEEc
Confidence 345555567888888887 57778888888 8777553
No 110
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.75 E-value=81 Score=23.51 Aligned_cols=41 Identities=12% Similarity=0.098 Sum_probs=29.4
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GN 62 (224)
+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-..
T Consensus 61 ~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 61 VVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp HHHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCEEEECCC
Confidence 34444567899999987544467778888878899887544
No 111
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=29.66 E-value=1.2e+02 Score=20.57 Aligned_cols=12 Identities=8% Similarity=0.282 Sum_probs=5.2
Q ss_pred HhcCCcEEEecC
Q psy10859 50 KTLASDVHVVRG 61 (224)
Q Consensus 50 ~~l~~~v~~v~G 61 (224)
+...+||.+++.
T Consensus 145 ~~~~~PVlvv~~ 156 (170)
T 2dum_A 145 RKTKKPVLIIKE 156 (170)
T ss_dssp HHCSSCEEEECC
T ss_pred HhCCCCEEEEcc
Confidence 333444444443
No 112
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=29.45 E-value=73 Score=20.97 Aligned_cols=44 Identities=11% Similarity=0.030 Sum_probs=27.5
Q ss_pred HHHhhcCCCccEEEEcCCCCChH----HHHHHHhcCCcEEEecCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKE----TFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~----~~~~l~~l~~~v~~v~GNHD~ 65 (224)
..+.+++..+-+||++.|.-..+ +....+..++|++++..+-+.
T Consensus 37 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eL 84 (120)
T 1xbi_A 37 VTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDL 84 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHH
T ss_pred HHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHH
Confidence 34455566788899999886633 223333346787777666554
No 113
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=29.37 E-value=33 Score=27.68 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=28.0
Q ss_pred HHHHhhcCCCccEEEEcCCCCC-hHHHHHHHhcCCcEEEecC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVT-KETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~-~~~~~~l~~l~~~v~~v~G 61 (224)
.+.+++++.+||.|+..||... -...-.....++|++.+.+
T Consensus 102 ~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a 143 (396)
T 3dzc_A 102 GMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA 143 (396)
T ss_dssp HHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC
T ss_pred HHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC
Confidence 4556667789999999999876 2222233455789888755
No 114
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=29.34 E-value=67 Score=20.65 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=23.5
Q ss_pred HhhcCCCccEEEEcCCCCChHHHHHHHhc--CCcEEEecCCCC
Q psy10859 24 KLLVPGRIQHILCTGNLVTKETFDYLKTL--ASDVHVVRGDFD 64 (224)
Q Consensus 24 ~~~~~~~~D~vi~~GDl~~~~~~~~l~~l--~~~v~~v~GNHD 64 (224)
+.+....+|.+| ..|.-..+.++.+++. ..|++++-+..+
T Consensus 56 ~~l~~~~~dlvi-~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 97 (137)
T 2pln_A 56 YLMDIRNYDLVM-VSDKNALSFVSRIKEKHSSIVVLVSSDNPT 97 (137)
T ss_dssp HHHHHSCCSEEE-ECSTTHHHHHHHHHHHSTTSEEEEEESSCC
T ss_pred HHHHcCCCCEEE-EcCccHHHHHHHHHhcCCCccEEEEeCCCC
Confidence 334455788888 5544335556666554 457777766554
No 115
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=29.31 E-value=8.7 Score=27.20 Aligned_cols=33 Identities=21% Similarity=0.144 Sum_probs=21.0
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCccEEEEcC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRIQHILCTG 38 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~D~vi~~G 38 (224)
|||++.|| |.+. ++.+.+.+.+++.+. -|+-.|
T Consensus 4 MkIaigsD-haG~---~lK~~i~~~L~~~G~-eV~D~G 36 (162)
T 2vvp_A 4 MRVYLGAD-HAGY---ELKQRIIEHLKQTGH-EPIDCG 36 (162)
T ss_dssp CEEEEEEC-HHHH---HHHHHHHHHHHHTTC-EEEECS
T ss_pred CEEEEEeC-chhH---HHHHHHHHHHHHCCC-EEEEeC
Confidence 89999999 6433 344567777765555 344455
No 116
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=29.16 E-value=62 Score=21.36 Aligned_cols=46 Identities=17% Similarity=0.135 Sum_probs=32.9
Q ss_pred HHHHHhhcCCCccEEEEcCCCCC----hHHHHHHHhcCCcEEEecCCCCC
Q psy10859 20 AKFKKLLVPGRIQHILCTGNLVT----KETFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 20 ~~l~~~~~~~~~D~vi~~GDl~~----~~~~~~l~~l~~~v~~v~GNHD~ 65 (224)
+.+.+++++.++|.++++-.... .+.++.+.+.+.++..+|.-.|.
T Consensus 55 ~~l~~~~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~~~ 104 (141)
T 3nkl_A 55 KYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNLDDL 104 (141)
T ss_dssp GGHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEECCCHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEECCCHHHH
Confidence 35666666678898888754444 46667777778899999876654
No 117
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=28.86 E-value=82 Score=20.48 Aligned_cols=8 Identities=38% Similarity=0.339 Sum_probs=3.9
Q ss_pred CCcEEEec
Q psy10859 53 ASDVHVVR 60 (224)
Q Consensus 53 ~~~v~~v~ 60 (224)
.+||.+++
T Consensus 130 ~~pVlvv~ 137 (141)
T 1jmv_A 130 KIDMLVVP 137 (141)
T ss_dssp CSEEEEEE
T ss_pred CCCEEEee
Confidence 44555544
No 118
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=28.46 E-value=68 Score=24.91 Aligned_cols=42 Identities=5% Similarity=0.108 Sum_probs=29.0
Q ss_pred HHHHhhcC-CCccEEEEcCCCCC-hHHHHHHHhcCCcEEEecCC
Q psy10859 21 KFKKLLVP-GRIQHILCTGNLVT-KETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 21 ~l~~~~~~-~~~D~vi~~GDl~~-~~~~~~l~~l~~~v~~v~GN 62 (224)
.+.+++.. .++|.||+.++-.. ...++.+.+.+.|++++-..
T Consensus 52 ~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 52 QARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESC
T ss_pred HHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCC
Confidence 34445544 69999999985332 56777777778898877543
No 119
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=28.43 E-value=1.1e+02 Score=19.22 Aligned_cols=43 Identities=9% Similarity=-0.019 Sum_probs=28.8
Q ss_pred HHhhcCCCccEEEEcCCCCC---hHHHHHHHhc----CCcEEEecCCCCC
Q psy10859 23 KKLLVPGRIQHILCTGNLVT---KETFDYLKTL----ASDVHVVRGDFDE 65 (224)
Q Consensus 23 ~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l----~~~v~~v~GNHD~ 65 (224)
.+.+....+|.|++-=++-+ .+.++.+++. ..|++++.+..+.
T Consensus 40 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 89 (133)
T 3nhm_A 40 LQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPR 89 (133)
T ss_dssp HHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-
T ss_pred HHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcH
Confidence 33445667999998766655 5666777764 4688888886654
No 120
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=27.86 E-value=91 Score=23.54 Aligned_cols=42 Identities=10% Similarity=0.112 Sum_probs=30.0
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRGDF 63 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNH 63 (224)
+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-..-
T Consensus 75 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~~~ 116 (305)
T 3huu_A 75 VKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGKSL 116 (305)
T ss_dssp HHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECCCC
Confidence 344445678999999885445677788887788988775443
No 121
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=27.85 E-value=90 Score=20.45 Aligned_cols=44 Identities=11% Similarity=0.078 Sum_probs=28.4
Q ss_pred HHHhhcCCCccEEEEcCCCCChH----HHHHHHhcCCcEEEecCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKE----TFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~----~~~~l~~l~~~v~~v~GNHD~ 65 (224)
..+.+++..+-+||++.|.-..+ +....+..+.|++++..+-+.
T Consensus 37 v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eL 84 (120)
T 1vq8_F 37 TTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDL 84 (120)
T ss_dssp HHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHHH
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHH
Confidence 34455667889999999987633 223334446787777666554
No 122
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=27.45 E-value=1.2e+02 Score=20.05 Aligned_cols=45 Identities=9% Similarity=-0.027 Sum_probs=30.1
Q ss_pred HHHhhcCCCccEEEEcCCCCChHH----HHHHHhcCCcEEEecCCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKET----FDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~----~~~l~~l~~~v~~v~GNHD~~ 66 (224)
..+.+++..+-+||++.|.-..+. ....+..+.|++++..+-+..
T Consensus 39 v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG 87 (122)
T 3o85_A 39 ALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFIGSKNALG 87 (122)
T ss_dssp HHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESCHHHHH
T ss_pred HHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHH
Confidence 455566778999999999976332 233344578887777666543
No 123
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=27.34 E-value=81 Score=22.82 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=29.9
Q ss_pred CCccEEEEc-CCCCC-hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 29 GRIQHILCT-GNLVT-KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 29 ~~~D~vi~~-GDl~~-~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
.++..++++ ||+.+ +++++.+++.+.++++-+++.+-.
T Consensus 30 s~~~~ifll~g~I~~L~~iv~~ik~~gK~vivh~DlI~GL 69 (188)
T 1vkf_A 30 IEPDVVFLLKSDILNLKFHLKILKDRGKTVFVDMDFVNGL 69 (188)
T ss_dssp CCSSEEEECCEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred CCCCEEEEEeCcHHHHHHHHHHHHHCCCeEEEecCccccc
Confidence 455666655 59987 889999988889999999988754
No 124
>2jnb_A NHP2-like protein 1; splicing, KINK-turn RNA-binding protein, NHPX, RNA binding protein; NMR {Homo sapiens} SCOP: d.79.3.1
Probab=27.30 E-value=38 Score=23.35 Aligned_cols=42 Identities=21% Similarity=0.098 Sum_probs=25.5
Q ss_pred HhhcCCCccEEEEcCCCCChHHHHHHHhc----CCcEEEecCCCCC
Q psy10859 24 KLLVPGRIQHILCTGNLVTKETFDYLKTL----ASDVHVVRGDFDE 65 (224)
Q Consensus 24 ~~~~~~~~D~vi~~GDl~~~~~~~~l~~l----~~~v~~v~GNHD~ 65 (224)
+.+++.++-+||+++|.-..+....+..+ +.|++++.++-+.
T Consensus 60 KaI~~gkakLVIIA~D~~p~e~~~~l~~lC~~~~VP~~~v~sk~eL 105 (144)
T 2jnb_A 60 KTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQAL 105 (144)
T ss_dssp HHHHHTCEEEEEEETTCSCHHHHTTSCSSCGGGCCCCEEESCSHHH
T ss_pred HHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEECCHHHH
Confidence 33445567788888887664444444332 5677777666553
No 125
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=27.24 E-value=92 Score=19.88 Aligned_cols=42 Identities=17% Similarity=0.085 Sum_probs=25.1
Q ss_pred HHhhcCCCccEEEEcCCCCC---hHHHHHHHhc--CCcEEEecCCCC
Q psy10859 23 KKLLVPGRIQHILCTGNLVT---KETFDYLKTL--ASDVHVVRGDFD 64 (224)
Q Consensus 23 ~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l--~~~v~~v~GNHD 64 (224)
.+.++...+|.||+--++-+ .+.++.+++. ..|++++.+..+
T Consensus 44 ~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 90 (137)
T 3hdg_A 44 ERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSE 90 (137)
T ss_dssp HHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCC
T ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcC
Confidence 33344557898888766665 4555566554 346666655544
No 126
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.00 E-value=51 Score=25.79 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=25.3
Q ss_pred CCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 28 PGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..+||+||..+. ..+.++.|++++.|++++.
T Consensus 114 al~PDLIi~~~~--~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 114 AATPDVVFLPMK--LKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp HTCCSEEEEEGG--GHHHHHHHHHTTCCEEEEC
T ss_pred hcCCCEEEEeCc--chhHHHHHHHcCCCEEEEc
Confidence 468999998763 4678899999999999885
No 127
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=26.84 E-value=83 Score=23.65 Aligned_cols=42 Identities=10% Similarity=0.149 Sum_probs=30.4
Q ss_pred HHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 20 AKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 20 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
..+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-.
T Consensus 55 ~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~~~~ 96 (294)
T 3qk7_A 55 QSLIHLVETRRVDALIVAHTQPEDFRLQYLQKQNFPFLALGR 96 (294)
T ss_dssp HHHHHHHHHTCCSEEEECSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHcCCCCEEEEeCCCCChHHHHHHHhCCCCEEEECC
Confidence 345555556789999998855555777888887889877644
No 128
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=26.61 E-value=19 Score=26.03 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=20.3
Q ss_pred CeEEEEeeccCCCCCCCChHHHHHhhcCCCc-cEEEEcCC
Q psy10859 1 MLVLVLGDLHIPHRTSGLPAKFKKLLVPGRI-QHILCTGN 39 (224)
Q Consensus 1 mki~~isDiH~~~~~~~~~~~l~~~~~~~~~-D~vi~~GD 39 (224)
|||++-|| |.+. ++.+.+.+.+++.+. --|+-.|-
T Consensus 30 MkIaIgsD-HaG~---~LK~~i~~~L~~~G~g~eV~D~G~ 65 (184)
T 3sgw_A 30 LRLAIACD-DAGV---SYKEALKAHLSDNPLVSSITDVGV 65 (184)
T ss_dssp EEEEEEEC-GGGH---HHHHHHHHHHTTCTTEEEEEECSC
T ss_pred cEEEEEEC-chhH---HHHHHHHHHHHhCCCCcEEEEcCC
Confidence 77888888 5433 344566666665542 34555553
No 129
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=26.61 E-value=76 Score=20.88 Aligned_cols=43 Identities=16% Similarity=0.095 Sum_probs=30.1
Q ss_pred HhhcCCCccEEEEcCCCCC---hHHHHHHHhcCCcEEEecCCCCCC
Q psy10859 24 KLLVPGRIQHILCTGNLVT---KETFDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 24 ~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l~~~v~~v~GNHD~~ 66 (224)
+.++...+|.++.-=.+=+ -++.+.+++.+.|++++-|+-|..
T Consensus 47 ~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~~~~~ 92 (123)
T 2lpm_A 47 DIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGYGSKG 92 (123)
T ss_dssp HHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTTCTTS
T ss_pred HHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecCccHH
Confidence 3445678999987322222 677888887788999999976653
No 130
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.60 E-value=1.2e+02 Score=18.99 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=25.5
Q ss_pred HHHhhcCCCccEEEEcCCCCC---hHHHHHHHhc--CCcEEEecCCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVT---KETFDYLKTL--ASDVHVVRGDFDE 65 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l--~~~v~~v~GNHD~ 65 (224)
..+.++...+|.+++-=++-+ .+.++.+++. ..|++++.+..+.
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 43 ALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENM 91 (130)
T ss_dssp HHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCH
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 334445667898888655544 4566666654 3577777665543
No 131
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=26.20 E-value=1.2e+02 Score=19.48 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=16.0
Q ss_pred CccEEEEcCCCCChHHHHHHHhcCCcEEEecCCCC
Q psy10859 30 RIQHILCTGNLVTKETFDYLKTLASDVHVVRGDFD 64 (224)
Q Consensus 30 ~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD 64 (224)
.++..+..||.. ..+.+..++.+.. .+|.|.|.
T Consensus 77 ~~~~~~~~g~~~-~~I~~~a~~~~~d-liV~G~~~ 109 (137)
T 2z08_A 77 KEDALLLEGVPA-EAILQAARAEKAD-LIVMGTRG 109 (137)
T ss_dssp GGGEEEEESSHH-HHHHHHHHHTTCS-EEEEESSC
T ss_pred ccEEEEEecCHH-HHHHHHHHHcCCC-EEEECCCC
Confidence 445666666532 3444444443322 35555554
No 132
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=26.12 E-value=1.1e+02 Score=24.02 Aligned_cols=30 Identities=3% Similarity=-0.114 Sum_probs=21.8
Q ss_pred CCccEEEEcCCCCChHHHHHHHhcCCcEEE
Q psy10859 29 GRIQHILCTGNLVTKETFDYLKTLASDVHV 58 (224)
Q Consensus 29 ~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~ 58 (224)
..||+||++.=..+...+..-+++++|++.
T Consensus 121 ~ePdllvV~Dp~~d~qAI~EA~~lnIPtIA 150 (305)
T 3iz6_A 121 SEPRLLILTDPRTDHQPIKESALGNIPTIA 150 (305)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHHTCCEEE
T ss_pred cCCceeEEeCcccchHHHHHHHHcCCCEEE
Confidence 468999998655556777777777888763
No 133
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=25.52 E-value=56 Score=27.36 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=26.0
Q ss_pred eEEEEeeccCCCCCCCChHHHHHhhcC--CCccEEEEcC
Q psy10859 2 LVLVLGDLHIPHRTSGLPAKFKKLLVP--GRIQHILCTG 38 (224)
Q Consensus 2 ki~~isDiH~~~~~~~~~~~l~~~~~~--~~~D~vi~~G 38 (224)
||++-+|.+...- ...+.|.+.+.+ .++|.+++.|
T Consensus 205 RfI~s~D~~N~~l--~~~e~f~~~l~e~~~~~dl~vlSG 241 (467)
T 1gc5_A 205 RFIANADDYNARV--YMRREFREGFEEITRNVELAIISG 241 (467)
T ss_dssp EEEEECCSSTTTT--CCCHHHHHSHHHHHTTCSEEEECC
T ss_pred eEEEecCCCCccc--cccHHHHHHHHhhccCCCEEEEec
Confidence 7888889776432 344567777665 7899999999
No 134
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=25.39 E-value=84 Score=22.80 Aligned_cols=44 Identities=11% Similarity=0.162 Sum_probs=29.4
Q ss_pred HHHHHhhcCCCccEEE-EcCCCCC-hHHHHHHHhcCCcEEEecCCCC
Q psy10859 20 AKFKKLLVPGRIQHIL-CTGNLVT-KETFDYLKTLASDVHVVRGDFD 64 (224)
Q Consensus 20 ~~l~~~~~~~~~D~vi-~~GDl~~-~~~~~~l~~l~~~v~~v~GNHD 64 (224)
+.|.++++.. ++.+| ..||+.+ ++.++.+++.+.++++-++.-+
T Consensus 20 ~~l~~al~s~-~~~ifll~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~ 65 (192)
T 3kts_A 20 KDMEKILELD-LTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVN 65 (192)
T ss_dssp HHHHHHTTSS-CCEEEECSEETTTHHHHHHHHHHTTCEEEEEGGGEE
T ss_pred HHHHHHHcCC-CCEEEEecCcHHHHHHHHHHHHHcCCeEEEecCchh
Confidence 3567766543 55554 5678877 8999999998776666554443
No 135
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=25.38 E-value=1.4e+02 Score=22.45 Aligned_cols=40 Identities=10% Similarity=0.186 Sum_probs=28.0
Q ss_pred HHHhhcCCCccEEEEcCCCCChH-HHHHHHhcCCcEEEecCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKE-TFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~-~~~~l~~l~~~v~~v~GN 62 (224)
+.+.+...++|.+|+.+--.+.. .++.+.+ +.|++++-..
T Consensus 63 ~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~ 103 (303)
T 3kke_A 63 LSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSR 103 (303)
T ss_dssp HHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCC
T ss_pred HHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCc
Confidence 34444567899999988544444 7788888 8998877443
No 136
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=25.26 E-value=1.3e+02 Score=22.29 Aligned_cols=38 Identities=8% Similarity=-0.008 Sum_probs=28.2
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
+.+.+...++|.+|+.+--. ...++.+.+.+.|++++-
T Consensus 55 ~~~~l~~~~vdgiIi~~~~~-~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 55 LLRAIGSRGFDGLILQSFSN-PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHTTTCSEEEEESSCC-HHHHHHHHTTSSCEEEES
T ss_pred HHHHHHhCCCCEEEEecCCc-HHHHHHHHHCCCCEEEEe
Confidence 33344467899999988555 777888887788988774
No 137
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=24.65 E-value=1.4e+02 Score=19.51 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=26.1
Q ss_pred HhhcCCCccEEEEcCCCCC---hHHHHHHHhc--CCcEEEecCCCC
Q psy10859 24 KLLVPGRIQHILCTGNLVT---KETFDYLKTL--ASDVHVVRGDFD 64 (224)
Q Consensus 24 ~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l--~~~v~~v~GNHD 64 (224)
+.++...+|+||+-=++-+ .++++.+++. ..|++++-+..+
T Consensus 52 ~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 52 QLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCC
T ss_pred HHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCC
Confidence 3344567898888766665 4555556554 457777777554
No 138
>2qai_A V-type ATP synthase subunit F; VATF_pyrfu, ATPF, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Pyrococcus furiosus}
Probab=24.23 E-value=32 Score=22.55 Aligned_cols=10 Identities=40% Similarity=0.763 Sum_probs=8.4
Q ss_pred CeEEEEeecc
Q psy10859 1 MLVLVLGDLH 10 (224)
Q Consensus 1 mki~~isDiH 10 (224)
||+++|||--
T Consensus 1 MKIaVIGD~D 10 (111)
T 2qai_A 1 MKIVVMGDSD 10 (111)
T ss_dssp CEEEEEECHH
T ss_pred CEEEEEECHH
Confidence 8999999943
No 139
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=24.05 E-value=99 Score=23.55 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=33.9
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHH----HHHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKET----FDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~----~~~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.++...+-+||++.|.-..+. ..+.+..++|++++.++-|..
T Consensus 138 eV~KaIekgKAkLVVIA~DadP~eivk~LpaLC~k~gVPy~~V~sK~eLG 187 (256)
T 3izc_H 138 HVVALIENKKAKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKARLG 187 (256)
T ss_dssp HHHHHHHHTCCSEEEEESCCSSGGGTTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHHhCcceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 4556667778999999999876333 344556689999998887754
No 140
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=23.94 E-value=1.4e+02 Score=20.29 Aligned_cols=10 Identities=10% Similarity=0.116 Sum_probs=5.6
Q ss_pred ccEEEEcCCC
Q psy10859 31 IQHILCTGNL 40 (224)
Q Consensus 31 ~D~vi~~GDl 40 (224)
++..+..||.
T Consensus 98 v~~~v~~G~~ 107 (163)
T 1tq8_A 98 VEERPIVGAP 107 (163)
T ss_dssp EEEEEECSSH
T ss_pred EEEEEecCCH
Confidence 4455666653
No 141
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=23.86 E-value=1.3e+02 Score=23.13 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=32.6
Q ss_pred HHHHhhcCCCccEEEEcCCCCChHH----HHHHHhcCCcEEEecCCCCCC
Q psy10859 21 KFKKLLVPGRIQHILCTGNLVTKET----FDYLKTLASDVHVVRGDFDEG 66 (224)
Q Consensus 21 ~l~~~~~~~~~D~vi~~GDl~~~~~----~~~l~~l~~~v~~v~GNHD~~ 66 (224)
...+.++...+-+||+++|.-..+. -.+.+..++|++++.++-+..
T Consensus 142 eV~KaIekgkAkLVIIA~DasP~ei~~~Lp~LC~~~~VPyi~v~sk~eLG 191 (266)
T 2zkr_f 142 TVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLG 191 (266)
T ss_dssp HHHHHHHTTCCSEEEEESCCSSSTTTTHHHHHHHHHTCCEEEESCHHHHH
T ss_pred HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHH
Confidence 4556667788999999999866322 244455688999997776643
No 142
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=23.12 E-value=1.4e+02 Score=19.17 Aligned_cols=9 Identities=11% Similarity=-0.197 Sum_probs=4.1
Q ss_pred ccEEEEcCC
Q psy10859 31 IQHILCTGN 39 (224)
Q Consensus 31 ~D~vi~~GD 39 (224)
++..+..||
T Consensus 88 ~~~~~~~g~ 96 (138)
T 1q77_A 88 PGVEYRIGP 96 (138)
T ss_dssp CCEEEECSC
T ss_pred ceEEEEcCC
Confidence 444444443
No 143
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=23.00 E-value=1.2e+02 Score=23.35 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=26.5
Q ss_pred CCCccEEEEcCCCCC--hHHHHHHHhcCCcEEEecCC
Q psy10859 28 PGRIQHILCTGNLVT--KETFDYLKTLASDVHVVRGD 62 (224)
Q Consensus 28 ~~~~D~vi~~GDl~~--~~~~~~l~~l~~~v~~v~GN 62 (224)
..+||+||..+...+ .+.++.|++++ |++++..+
T Consensus 113 ~l~PDLIi~~~~~~~~~~~~~~~L~~~g-pvv~~~~~ 148 (326)
T 3tlk_A 113 AQMPDLILISATGGDSALALYDQLSTIA-PTLIINYD 148 (326)
T ss_dssp TTCCSEEEEESSSTTCCGGGHHHHHTTS-CEEEECCS
T ss_pred hCCCCEEEEeCCCccchHHHHHHHHhhC-CEEEEcCC
Confidence 578999998765443 57889999998 99888643
No 144
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=23.00 E-value=1.5e+02 Score=18.99 Aligned_cols=32 Identities=16% Similarity=0.030 Sum_probs=21.1
Q ss_pred CccEEEE--cCCCCC----hHHHHHHHhcCCcEEEecC
Q psy10859 30 RIQHILC--TGNLVT----KETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 30 ~~D~vi~--~GDl~~----~~~~~~l~~l~~~v~~v~G 61 (224)
+-+.+++ +||=.= .+.++.+.+.+.++..+||
T Consensus 79 G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viPG 116 (117)
T 3hh1_A 79 GSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPVPG 116 (117)
T ss_dssp TCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC-
T ss_pred CCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEeCC
Confidence 3444444 488653 5677777777889999998
No 145
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=22.99 E-value=1.6e+02 Score=19.14 Aligned_cols=43 Identities=9% Similarity=0.001 Sum_probs=27.3
Q ss_pred HHHhhcCCCccEEEEcCCCCC---hHHHHHHHhc--CCcEEEecCCCC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVT---KETFDYLKTL--ASDVHVVRGDFD 64 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~---~~~~~~l~~l--~~~v~~v~GNHD 64 (224)
..+.++...+|.+++--++-+ .+.++.+++. ..|++++.+..+
T Consensus 43 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 43 AYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQG 90 (153)
T ss_dssp HHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 334445667899988766655 4556666654 357777776554
No 146
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=22.40 E-value=2.4e+02 Score=20.85 Aligned_cols=39 Identities=8% Similarity=0.169 Sum_probs=26.2
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
+.+.+...++|.+|+.+--.+.+.++.+.+.+.|++++-
T Consensus 56 ~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 56 YRDLIRSGNVDGFVLSSINYNDPRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp HHHHHHTTCCSEEEECSCCTTCHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCCCCEEEEeecCCCcHHHHHHHhcCCCEEEEC
Confidence 333344678999998874333456777777788987773
No 147
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=22.31 E-value=62 Score=20.74 Aligned_cols=44 Identities=7% Similarity=0.022 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCccEEEEcCCCCC--hHHHHHHHhc-CCc-EEEecCCC
Q psy10859 20 AKFKKLLVPGRIQHILCTGNLVT--KETFDYLKTL-ASD-VHVVRGDF 63 (224)
Q Consensus 20 ~~l~~~~~~~~~D~vi~~GDl~~--~~~~~~l~~l-~~~-v~~v~GNH 63 (224)
++|.++++..++..|+++-++.+ ++.++..+.- ..| ++.||+++
T Consensus 43 ~~~~~l~~~~digIIlIte~ia~~i~~~i~~~~~~~~~P~IieIPs~~ 90 (102)
T 2i4r_A 43 KAVEDVLKRDDVGVVIMKQEYLKKLPPVLRREIDEKVEPTFVSVGGTG 90 (102)
T ss_dssp HHHHHHHHCSSEEEEEEEGGGSTTSCHHHHTTTTTCCSSEEEEEC---
T ss_pred HHHHHHhhCCCeEEEEEeHHHHHHHHHHHHHHHhCCCccEEEEECCCC
Confidence 45677777778999999999998 5666655542 245 56666665
No 148
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=22.15 E-value=1.3e+02 Score=22.03 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=25.2
Q ss_pred cCCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 27 VPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 27 ~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
...++|.+|+.+--.+...++.+.+.+.|++++-
T Consensus 56 ~~~~vdgii~~~~~~~~~~~~~l~~~~iPvV~~~ 89 (275)
T 3d8u_A 56 LESRPAGVVLFGSEHSQRTHQLLEASNTPVLEIA 89 (275)
T ss_dssp HTSCCCCEEEESSCCCHHHHHHHHHHTCCEEEES
T ss_pred HhcCCCEEEEeCCCCCHHHHHHHHhCCCCEEEEe
Confidence 4678999998875445667777777788988773
No 149
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=21.90 E-value=56 Score=27.30 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=25.7
Q ss_pred eEEEEeeccCCCCCCCChHHHHHhhcC--CCccEEEEcC
Q psy10859 2 LVLVLGDLHIPHRTSGLPAKFKKLLVP--GRIQHILCTG 38 (224)
Q Consensus 2 ki~~isDiH~~~~~~~~~~~l~~~~~~--~~~D~vi~~G 38 (224)
||++-+|.+...- ...+.|.+.+.+ .++|.+++.|
T Consensus 200 RfI~s~D~~N~~l--~~~e~f~~~l~e~~~~~d~~vlSG 236 (457)
T 1l2l_A 200 RFIGAADDYNPIL--YVREEWIERFEEIAKRSELAIISG 236 (457)
T ss_dssp EEEEEECSSGGGT--CCCHHHHHSHHHHHTTCSEEEEEC
T ss_pred eEEEEcCCCCCCC--cccHHHHHHHHhhccCCCEEEEec
Confidence 7888889775322 334567777665 7899999999
No 150
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=21.81 E-value=1.5e+02 Score=19.11 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=15.4
Q ss_pred cEEEEcCCCCChHHHHHHHhcCCcEEEecCCC
Q psy10859 32 QHILCTGNLVTKETFDYLKTLASDVHVVRGDF 63 (224)
Q Consensus 32 D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNH 63 (224)
...+..||.. ..+.+..++.+.. .+|.|.|
T Consensus 86 ~~~~~~g~~~-~~I~~~a~~~~~d-liV~G~~ 115 (143)
T 3fdx_A 86 HFHVAEGSPK-DKILALAKSLPAD-LVIIASH 115 (143)
T ss_dssp EEEEEESCHH-HHHHHHHHHTTCS-EEEEESS
T ss_pred EEEEEecChH-HHHHHHHHHhCCC-EEEEeCC
Confidence 5566667543 3444444443322 4566666
No 151
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=21.74 E-value=2.5e+02 Score=21.73 Aligned_cols=41 Identities=5% Similarity=0.067 Sum_probs=29.8
Q ss_pred HHHHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEec
Q psy10859 20 AKFKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVR 60 (224)
Q Consensus 20 ~~l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~ 60 (224)
..+.+.+...++|.+|+.+--.+...++.+.+.+.|++++-
T Consensus 118 ~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~i~ 158 (366)
T 3h5t_A 118 VSAQQLVNNAAVDGVVIYSVAKGDPHIDAIRARGLPAVIAD 158 (366)
T ss_dssp HHHHHHHHTCCCSCEEEESCCTTCHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHhCCCCEEEEecCCCChHHHHHHHHCCCCEEEEC
Confidence 34555556789999999986444667777777788998773
No 152
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=21.27 E-value=2.5e+02 Score=20.74 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=27.6
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEecC
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHVVRG 61 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v~G 61 (224)
..+.+...++|.+|+.+--.+.+.++.+.+ +.|++++-.
T Consensus 58 ~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~-~iPvV~i~~ 96 (289)
T 3k9c_A 58 AVQALMRERCEAAILLGTRFDTDELGALAD-RVPALVVAR 96 (289)
T ss_dssp HHHHHTTTTEEEEEEETCCCCHHHHHHHHT-TSCEEEESS
T ss_pred HHHHHHhCCCCEEEEECCCCCHHHHHHHHc-CCCEEEEcC
Confidence 333345678999999985555667777776 889877743
No 153
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=21.26 E-value=1.1e+02 Score=19.81 Aligned_cols=35 Identities=9% Similarity=0.274 Sum_probs=23.8
Q ss_pred HHHhhcCCCccEEEEcCCCCChHHHHHHHhcCCcEEE
Q psy10859 22 FKKLLVPGRIQHILCTGNLVTKETFDYLKTLASDVHV 58 (224)
Q Consensus 22 l~~~~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~ 58 (224)
+.+.+...++|.||+.+ +....++.|.+.++.++.
T Consensus 57 ~~~~l~~~gv~~vi~~~--iG~~a~~~L~~~GI~v~~ 91 (124)
T 1eo1_A 57 TAQIIANNGVKAVIASS--PGPNAFEVLNELGIKIYR 91 (124)
T ss_dssp HHHHHHHTTCCEEEECC--SSHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHCCCCEEEECC--cCHHHHHHHHHCCCEEEE
Confidence 44445556788888777 567777777777666544
No 154
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=20.18 E-value=1.6e+02 Score=18.99 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=17.8
Q ss_pred cEEEEcCCCCChHHHHHHHhcCCcEEEecCCCCC
Q psy10859 32 QHILCTGNLVTKETFDYLKTLASDVHVVRGDFDE 65 (224)
Q Consensus 32 D~vi~~GDl~~~~~~~~l~~l~~~v~~v~GNHD~ 65 (224)
+..+..||.. ...++..++.+. =.+|.|.|..
T Consensus 90 ~~~~~~g~~~-~~I~~~a~~~~~-dliV~G~~~~ 121 (147)
T 3hgm_A 90 RAFVKGGRPS-RTIVRFARKREC-DLVVIGAQGT 121 (147)
T ss_dssp EEEEEESCHH-HHHHHHHHHTTC-SEEEECSSCT
T ss_pred EEEEecCCHH-HHHHHHHHHhCC-CEEEEeCCCC
Confidence 6677777543 344555554432 3566777654
No 155
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=20.16 E-value=82 Score=23.30 Aligned_cols=37 Identities=8% Similarity=0.089 Sum_probs=26.1
Q ss_pred HHhhcCCCccEEEEcCCCCChHHHH-HHHhcCCcEEEecC
Q psy10859 23 KKLLVPGRIQHILCTGNLVTKETFD-YLKTLASDVHVVRG 61 (224)
Q Consensus 23 ~~~~~~~~~D~vi~~GDl~~~~~~~-~l~~l~~~v~~v~G 61 (224)
.+.+...++|.+|+.+ .+.+.++ .+.+.+.|++++-.
T Consensus 57 ~~~l~~~~~dgiIi~~--~~~~~~~~~l~~~~iPvV~~~~ 94 (277)
T 3e61_A 57 LATFVSHNCTGMISTA--FNENIIENTLTDHHIPFVFIDR 94 (277)
T ss_dssp HHHHHHTTCSEEEECG--GGHHHHHHHHHHC-CCEEEGGG
T ss_pred HHHHHhCCCCEEEEec--CChHHHHHHHHcCCCCEEEEec
Confidence 3333457899999988 5566777 88887889877643
No 156
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=20.05 E-value=1.8e+02 Score=22.30 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=26.1
Q ss_pred hcCCCccEEEEcCCCCChHHHHHHHhcCCcEEEe
Q psy10859 26 LVPGRIQHILCTGNLVTKETFDYLKTLASDVHVV 59 (224)
Q Consensus 26 ~~~~~~D~vi~~GDl~~~~~~~~l~~l~~~v~~v 59 (224)
+...++|.+|+.+--.+...++.+.+.+.|++++
T Consensus 120 l~~~~vdGiIi~~~~~~~~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 120 MLSWRPSGVIIAGLEHSEAARAMLDAAGIPVVEI 153 (344)
T ss_dssp HHTTCCSEEEEECSCCCHHHHHHHHHCSSCEEEE
T ss_pred HHhCCCCEEEEECCCCCHHHHHHHHhCCCCEEEE
Confidence 3467899999988544567778888878899887
No 157
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=20.04 E-value=1.5e+02 Score=20.18 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=28.0
Q ss_pred hcCCCccEEEEcCCCCC--hHHHHHHHhcCCcEEEecCCC
Q psy10859 26 LVPGRIQHILCTGNLVT--KETFDYLKTLASDVHVVRGDF 63 (224)
Q Consensus 26 ~~~~~~D~vi~~GDl~~--~~~~~~l~~l~~~v~~v~GNH 63 (224)
+++.+.-+++++|--.. ..+.+.+++.+.+..++.-||
T Consensus 36 l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 36 LQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp HHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred HHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 34678999999996432 567778888887777776675
Done!