RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1086
(654 letters)
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 115 bits (288), Expect = 2e-30
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 26/209 (12%)
Query: 176 IADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLI 235
+AD+GLVGFP+ GKST L +S A+PKIA Y FTT+ PN+G++ DD R +ADLPGLI
Sbjct: 1 LADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLI 60
Query: 236 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 295
EGAH+ +G+GHQFLRH+ERT++I ++D++G + R + L +N+EL Y +
Sbjct: 61 EGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLE------GRDPYDDYLTINQELSEYNLR 114
Query: 296 LLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 355
L E+P I++ NKMD+ A E + ++ L + + PISA
Sbjct: 115 LTERPQIIVANKMDMPEAAENLEAFKEKLTD-------------------DYPVFPISAV 155
Query: 356 TNSTDVNDAKLKIRSILDLLAEEEQEMVD 384
T + + ++ + L+ E +
Sbjct: 156 TR-EGLRELLFEVANQLENTPEFPLYDEE 183
Score = 115 bits (288), Expect = 2e-30
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 26/209 (12%)
Query: 424 IADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLI 483
+AD+GLVGFP+ GKST L +S A+PKIA Y FTT+ PN+G++ DD R +ADLPGLI
Sbjct: 1 LADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLI 60
Query: 484 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 543
EGAH+ +G+GHQFLRH+ERT++I ++D++G + R + L +N+EL Y +
Sbjct: 61 EGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLE------GRDPYDDYLTINQELSEYNLR 114
Query: 544 LLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 603
L E+P I++ NKMD+ A E + ++ L + + PISA
Sbjct: 115 LTERPQIIVANKMDMPEAAENLEAFKEKLTD-------------------DYPVFPISAV 155
Query: 604 TNSTDVNDAKLKIRSILDLLAEEEQEMVD 632
T + + ++ + L+ E +
Sbjct: 156 TR-EGLRELLFEVANQLENTPEFPLYDEE 183
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 114 bits (287), Expect = 4e-29
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-------------- 224
G+VG PN GKST A+++A + A+YPF TI+PN GV+ D R
Sbjct: 5 CGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERIL 64
Query: 225 --KMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNG-FQLGLKHPKRSCVET 281
M D+ GL+ GA + G+G++FL ++ T I +V + K ++
Sbjct: 65 PTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDD 124
Query: 282 VLLLNKELELYKMNLLEKPI--ILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQ 339
+ +N EL L ++ E+ I + K + A+ + L L++
Sbjct: 125 IDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRSVGLD 184
Query: 340 PEKVIKFQSILPISAKT 356
E++ +S ++ K
Sbjct: 185 KEELQAIKSYNFLTLKP 201
Score = 114 bits (287), Expect = 4e-29
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-------------- 472
G+VG PN GKST A+++A + A+YPF TI+PN GV+ D R
Sbjct: 5 CGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERIL 64
Query: 473 --KMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNG-FQLGLKHPKRSCVET 529
M D+ GL+ GA + G+G++FL ++ T I +V + K ++
Sbjct: 65 PTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDD 124
Query: 530 VLLLNKELELYKMNLLEKPI--ILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQ 587
+ +N EL L ++ E+ I + K + A+ + L L++
Sbjct: 125 IDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPVLENAGMIRSVGLD 184
Query: 588 PEKVIKFQSILPISAKT 604
E++ +S ++ K
Sbjct: 185 KEELQAIKSYNFLTLKP 201
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 113 bits (283), Expect = 3e-28
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 36/265 (13%)
Query: 426 DIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVI------------------- 466
+IG+VG PN GKSTF A + +IA+YPFTTI+ NVGV
Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61
Query: 467 ----TFDDFRKMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHP 522
+ + D+ GL+ GAH G+G++FL + + +VD G P
Sbjct: 62 YEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQP 121
Query: 523 --KRSCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQ------EIYDGIRDTLHN 574
VE + L +E++ + +L K ++ ++ + E GI ++
Sbjct: 122 TDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNEND 181
Query: 575 LKDHIHKY-----PEEFQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQE 629
+ + +HK P ++ + ++ F S + K N A + L EE++
Sbjct: 182 VWEAMHKLNLPEDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEK 241
Query: 630 MVDRELELVKKLKSSLREHQGEMII 654
+ + +LR+ I
Sbjct: 242 RGYIVIPTSAAAELTLRKAAKAGFI 266
Score = 113 bits (282), Expect = 4e-28
Identities = 67/316 (21%), Positives = 115/316 (36%), Gaps = 54/316 (17%)
Query: 178 DIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVI------------------- 218
+IG+VG PN GKSTF A + +IA+YPFTTI+ NVGV
Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61
Query: 219 ----TFDDFRKMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHP 274
+ + D+ GL+ GAH G+G++FL + + +VD G P
Sbjct: 62 YEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQP 121
Query: 275 --KRSCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQ------EIYDGIRDTLHN 326
VE + L +E++ + +L K ++ ++ + E GI ++
Sbjct: 122 TDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNEND 181
Query: 327 LKDHIHKY-----PEEFQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAE---- 377
+ + +HK P ++ + ++ F S + K N A + L
Sbjct: 182 VWEAMHKLNLPEDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEK 241
Query: 378 ---------EEQEMVDRELELDSIIIAHGGAGGNAQNGWLGRKGEELAVRLELKLIADIG 428
E+ R+ I GA + K + L +I +
Sbjct: 242 RGYIVIPTSAAAELTLRKAAKAGFIEYIPGASEFKVLRDMSEKQ-----KRALMVIKEKV 296
Query: 429 LVGFPNAGKSTFLKAI 444
L F + G + +
Sbjct: 297 LDRFGSTGVQEVINRV 312
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 107 bits (268), Expect = 2e-26
Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 36/261 (13%)
Query: 160 LGRKGEELAVRLELKLIADIGLVGFPNAGKSTFLKAISRA-RPKIASYPFTTIKPNVGVI 218
GR G L G+VG PN GKSTF +AI+++ A+YP+ TI P +
Sbjct: 4 WGRPGNNL----------KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKV 53
Query: 219 TFDDFR----------------KMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIV 262
D R ++V D+ GL +GA +G+G+ FL HV I +V
Sbjct: 54 AVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVV 113
Query: 263 DVNGF-QLGLKHPKRSCVETVLLLNKELELYKMNLLEKPIILLV--------NKMDVEGA 313
++ + + ++ EL + +EK + L
Sbjct: 114 RAFDDAEIIHVEGDVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANTLEMKAKK 173
Query: 314 QEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILD 373
+E + + + ++ +V S+ ++AK VN ++ +
Sbjct: 174 EEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQKN 233
Query: 374 LLAEEEQEMVDRELELDSIII 394
+ ++ +D D++I
Sbjct: 234 KYLPKIKKWIDENSPGDTLIP 254
Score = 105 bits (262), Expect = 1e-25
Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 41/237 (17%)
Query: 408 LGRKGEELAVRLELKLIADIGLVGFPNAGKSTFLKAISRA-RPKIASYPFTTIKPNVGVI 466
GR G L G+VG PN GKSTF +AI+++ A+YP+ TI P +
Sbjct: 4 WGRPGNNL----------KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKV 53
Query: 467 TFDDFR----------------KMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIV 510
D R ++V D+ GL +GA +G+G+ FL HV I +V
Sbjct: 54 AVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVV 113
Query: 511 DVNGF-QLGLKHPKRSCVETVLLLNKELELYKMNLLEKPIILLVNK-------------M 556
++ + + ++ EL + +EK + L
Sbjct: 114 RAFDDAEIIHVEGDVDPIRDLSIIVDELLIKDAEFVEKHLEGLRKITSRGANTLEMKAKK 173
Query: 557 DVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTDVNDAK 613
+ + E E + + + P+ N ++ + +
Sbjct: 174 EEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLR 230
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 103 bits (258), Expect = 3e-26
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 30/206 (14%)
Query: 176 IADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLI 235
IAD+GLVG+PNAGKS+ L A++RA PKIA YPFTT+ PN+GV+ + + ++AD+PG+I
Sbjct: 1 IADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGII 60
Query: 236 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 295
EGA G+G +FLRH+ RT+++ ++D L L KE+ Y
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLET----------LRKEVGAYDPA 110
Query: 296 LLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 355
LL +P ++ +NK+D+ + + K E +LP+SA
Sbjct: 111 LLRRPSLVALNKVDLLEEEAV-----------KALADALAREGLA--------VLPVSAL 151
Query: 356 TNSTDVNDAKLKIRSILDLLAEEEQE 381
T + K + +++ E
Sbjct: 152 TG-AGLPALKEALHALVRSTPPPEMP 176
Score = 103 bits (258), Expect = 3e-26
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 30/206 (14%)
Query: 424 IADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLI 483
IAD+GLVG+PNAGKS+ L A++RA PKIA YPFTT+ PN+GV+ + + ++AD+PG+I
Sbjct: 1 IADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGII 60
Query: 484 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 543
EGA G+G +FLRH+ RT+++ ++D L L KE+ Y
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLET----------LRKEVGAYDPA 110
Query: 544 LLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 603
LL +P ++ +NK+D+ + + K E +LP+SA
Sbjct: 111 LLRRPSLVALNKVDLLEEEAV-----------KALADALAREGLA--------VLPVSAL 151
Query: 604 TNSTDVNDAKLKIRSILDLLAEEEQE 629
T + K + +++ E
Sbjct: 152 TG-AGLPALKEALHALVRSTPPPEMP 176
>d1udxa1 b.117.1.1 (A:1-156) Obg GTP-binding protein N-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 156
Score = 80.8 bits (199), Expect = 2e-18
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 43 FLDSLSLYVKGGSGGNGQPKY------------GGLGGRGGNVVCKVKAGASLESVKKQF 90
F D L + V G GG+G + GG GGRGG+V + + S++S+ +
Sbjct: 2 FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRAR--GSVDSLSRLS 59
Query: 91 KGVRITAASGDNSLVHRLAGRNGEDKILELPVGITAY-ADGGTKLGELNTEEDSIIIAHG 149
K A G++ + GR GED ++E+P G + AD G L +L E ++++A G
Sbjct: 60 KRTYK-AEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARG 118
Query: 150 GAGGNAQNGW------------LGRKGEELAVRLELKL 175
GAGG + G +GE+ +RLEL L
Sbjct: 119 GAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELML 156
Score = 31.8 bits (72), Expect = 0.10
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
Query: 357 NSTDVNDAKLKIRSILDLLAEEEQEMV-DRELELDSIIIAHGGAGGNAQNGW-------- 407
+ D +++ + + E++ D E ++++A GGAGG +
Sbjct: 77 HGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAP 136
Query: 408 ----LGRKGEELAVRLELKL 423
G +GE+ +RLEL L
Sbjct: 137 RFAEAGEEGEKRRLRLELML 156
>d1lnza1 b.117.1.1 (A:1-157) Obg GTP-binding protein N-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 157
Score = 79.7 bits (196), Expect = 3e-18
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 27/158 (17%)
Query: 43 FLDSLSLYVKGGSGGNG-----QPKY-------GGLGGRGGNVVCKVKAGASLESVKKQF 90
F+D + +YVKGG GGNG + KY GG GG+GG+VV +V L ++
Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVD--EGLRTLMDFR 59
Query: 91 KGVRITAASGDNSLVHRLAGRNGEDKILELPVGITAY-ADGGTKLGELNTEEDSIIIAHG 149
A G++ + GRN +D ++++P G D + +L +IA G
Sbjct: 60 YKKHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARG 119
Query: 150 GAGGNAQNGW------------LGRKGEELAVRLELKL 175
G GG + + G G+E + LELK+
Sbjct: 120 GRGGRGNSRFATPANPAPQLSENGEPGKERYIVLELKV 157
Score = 33.0 bits (75), Expect = 0.051
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 360 DVNDAKLKIRSILDLLAEEEQEMV-DRELELDSIIIAHGGAGGNAQNGW----------- 407
+ +D +K+ + ++ ++++ D +IA GG GG + +
Sbjct: 81 NADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLS 140
Query: 408 -LGRKGEELAVRLELKL 423
G G+E + LELK+
Sbjct: 141 ENGEPGKERYIVLELKV 157
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 67.4 bits (163), Expect = 1e-13
Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 23/200 (11%)
Query: 177 ADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIE 236
A I G N GKST + ++ + + P T K +++ + D+PG
Sbjct: 1 ATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKII-----EIEWKNHKIIDMPGFGF 55
Query: 237 GAHRNLGMGHQFLRHVERTKLIAMI-VDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 295
+ + + +DV + K +++
Sbjct: 56 MMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQ 115
Query: 296 LL---EKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
L + P I+ VNK+ D + N+++ I+ E+F+ + +PI
Sbjct: 116 FLRELDIPTIVAVNKL-------------DKIKNVQEVINFLAEKFEVPLSEIDKVFIPI 162
Query: 353 SAKTNSTDVNDAKLKIRSIL 372
SAK ++ K +I ++
Sbjct: 163 SAKFG-DNIERLKNRIFEVI 181
Score = 67.4 bits (163), Expect = 1e-13
Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 23/200 (11%)
Query: 425 ADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIE 484
A I G N GKST + ++ + + P T K +++ + D+PG
Sbjct: 1 ATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKII-----EIEWKNHKIIDMPGFGF 55
Query: 485 GAHRNLGMGHQFLRHVERTKLIAMI-VDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 543
+ + + +DV + K +++
Sbjct: 56 MMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQ 115
Query: 544 LL---EKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
L + P I+ VNK+ D + N+++ I+ E+F+ + +PI
Sbjct: 116 FLRELDIPTIVAVNKL-------------DKIKNVQEVINFLAEKFEVPLSEIDKVFIPI 162
Query: 601 SAKTNSTDVNDAKLKIRSIL 620
SAK ++ K +I ++
Sbjct: 163 SAKFG-DNIERLKNRIFEVI 181
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 62.0 bits (149), Expect = 7e-12
Identities = 44/196 (22%), Positives = 73/196 (37%), Gaps = 35/196 (17%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I +VG PN GKST L + + I S T + + I + + D PGL
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 239 HRNL--GMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 296
R + M + +L+ +V+ + + E+ L K+
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRW----------------TPDDEMVLNKLRE 111
Query: 297 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 356
+ P+IL VNK+D N+++ P + F I+PISA+T
Sbjct: 112 GKAPVILAVNKVD----------------NVQEKADLLPHLQFLASQMNFLDIVPISAET 155
Query: 357 NSTDVNDAKLKIRSIL 372
+V+ +R L
Sbjct: 156 G-LNVDTIAAIVRKHL 170
Score = 62.0 bits (149), Expect = 7e-12
Identities = 44/196 (22%), Positives = 73/196 (37%), Gaps = 35/196 (17%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I +VG PN GKST L + + I S T + + I + + D PGL
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 487 HRNL--GMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 544
R + M + +L+ +V+ + + E+ L K+
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRW----------------TPDDEMVLNKLRE 111
Query: 545 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 604
+ P+IL VNK+D N+++ P + F I+PISA+T
Sbjct: 112 GKAPVILAVNKVD----------------NVQEKADLLPHLQFLASQMNFLDIVPISAET 155
Query: 605 NSTDVNDAKLKIRSIL 620
+V+ +R L
Sbjct: 156 G-LNVDTIAAIVRKHL 170
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 58.1 bits (139), Expect = 3e-10
Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 34/209 (16%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ VG ++GK+ + + + T+I + + ++ R S+ + +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQYRDT---QTSITDSSAIYKVNNNRGNSLTLIDLPGHES 59
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
R R + + +VD FQ R + L + L
Sbjct: 60 LRF----QLLDRFKSSARAVVFVVDSAAFQ-------REVKDVAEFLYQVLIDSMALKNS 108
Query: 299 KPIILLVNKMDVEGA---QEIYDGIRDTLHNLKD-----------------HIHKYPEEF 338
+++ NK D+ A + I + L+ L+ + K +EF
Sbjct: 109 PSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEF 168
Query: 339 QPEKVIKFQSILPISAKTNSTDVNDAKLK 367
+ ++ L SAK D A ++
Sbjct: 169 EFSQLPLKVEFLECSAKGGRGDTGSADIQ 197
Score = 58.1 bits (139), Expect = 3e-10
Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 34/209 (16%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ VG ++GK+ + + + T+I + + ++ R S+ + +
Sbjct: 3 VLFVGLCDSGKTLLFVRLLTGQYRDT---QTSITDSSAIYKVNNNRGNSLTLIDLPGHES 59
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
R R + + +VD FQ R + L + L
Sbjct: 60 LRF----QLLDRFKSSARAVVFVVDSAAFQ-------REVKDVAEFLYQVLIDSMALKNS 108
Query: 547 KPIILLVNKMDVEGA---QEIYDGIRDTLHNLKD-----------------HIHKYPEEF 586
+++ NK D+ A + I + L+ L+ + K +EF
Sbjct: 109 PSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEF 168
Query: 587 QPEKVIKFQSILPISAKTNSTDVNDAKLK 615
+ ++ L SAK D A ++
Sbjct: 169 EFSQLPLKVEFLECSAKGGRGDTGSADIQ 197
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 56.9 bits (136), Expect = 4e-10
Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 39/181 (21%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ +VG PN GKST L + I + T + + + D G+
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 239 HRNLG--MGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 296
+ + + L+ +E+ ++ ++D +
Sbjct: 63 NDLVERLGIERTLQEIEKADIVLFVLDASSPL---------------------------- 94
Query: 297 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 356
++ D + + I + + N D + K EE K+ + ++ ISA
Sbjct: 95 ---------DEEDRKILERIKNKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVKISALK 145
Query: 357 N 357
Sbjct: 146 G 146
Score = 56.9 bits (136), Expect = 4e-10
Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 39/181 (21%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ +VG PN GKST L + I + T + + + D G+
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 487 HRNLG--MGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 544
+ + + L+ +E+ ++ ++D +
Sbjct: 63 NDLVERLGIERTLQEIEKADIVLFVLDASSPL---------------------------- 94
Query: 545 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 604
++ D + + I + + N D + K EE K+ + ++ ISA
Sbjct: 95 ---------DEEDRKILERIKNKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVKISALK 145
Query: 605 N 605
Sbjct: 146 G 146
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 50.9 bits (120), Expect = 5e-08
Identities = 22/170 (12%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Query: 177 ADIGLVGFPNAGKSTFLKAISRARPKIAS-YPFTTIKPNVGVITFDDFRKMSVADLPGLI 235
A + +VG PN GKST + + + I T P + + V
Sbjct: 1 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFD 60
Query: 236 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 295
+ ++ R + + V + + + ++ L K
Sbjct: 61 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAE 120
Query: 296 LLEKPIILLVNKMDVEGAQEIY-------DGIRDTLHNLKDHIHKYPEEF 338
L + + ++ G E + L + + E+
Sbjct: 121 NLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKL---EEKG 167
Score = 50.9 bits (120), Expect = 5e-08
Identities = 22/170 (12%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Query: 425 ADIGLVGFPNAGKSTFLKAISRARPKIAS-YPFTTIKPNVGVITFDDFRKMSVADLPGLI 483
A + +VG PN GKST + + + I T P + + V
Sbjct: 1 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFD 60
Query: 484 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 543
+ ++ R + + V + + + ++ L K
Sbjct: 61 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAE 120
Query: 544 LLEKPIILLVNKMDVEGAQEIY-------DGIRDTLHNLKDHIHKYPEEF 586
L + + ++ G E + L + + E+
Sbjct: 121 NLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKL---EEKG 167
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 48.5 bits (114), Expect = 4e-07
Identities = 29/179 (16%), Positives = 44/179 (24%), Gaps = 22/179 (12%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ +VG PN GKST AI + S T + V F D RK D GL
Sbjct: 11 VAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRR-- 68
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ R DV L
Sbjct: 69 KSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQG-----------------ITRQDQR 111
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 357
++ +D + + + E+ I + ++ SA
Sbjct: 112 MAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYF---IDYSPLIFTSADKG 167
Score = 48.5 bits (114), Expect = 4e-07
Identities = 29/179 (16%), Positives = 44/179 (24%), Gaps = 22/179 (12%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ +VG PN GKST AI + S T + V F D RK D GL
Sbjct: 11 VAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRR-- 68
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ R DV L
Sbjct: 69 KSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQG-----------------ITRQDQR 111
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 605
++ +D + + + E+ I + ++ SA
Sbjct: 112 MAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYF---IDYSPLIFTSADKG 167
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 48.5 bits (114), Expect = 7e-07
Identities = 39/228 (17%), Positives = 73/228 (32%), Gaps = 24/228 (10%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ ++G + GK+T L I + T I D + L
Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67
Query: 239 HRNLGMGHQFLRHVERT----------KLIAMIVDVN-----GFQLGLKHPKRSCVETVL 283
H T L +IVD+N Q L + V+
Sbjct: 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVV 127
Query: 284 LLNK-ELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEK 342
NK + +P + +K D++ Q++ + + + L + + +
Sbjct: 128 AANKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTD 187
Query: 343 VIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQEMVDRELELD 390
SI+PISA T I +L +L Q+ + +L+++
Sbjct: 188 FASQVSIIPISAITG--------EGIPELLTMLMGLAQQYLREQLKIE 227
Score = 46.6 bits (109), Expect = 3e-06
Identities = 39/227 (17%), Positives = 72/227 (31%), Gaps = 24/227 (10%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ ++G + GK+T L I + T I D + L
Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67
Query: 487 HRNLGMGHQFLRHVERT----------KLIAMIVDVN-----GFQLGLKHPKRSCVETVL 531
H T L +IVD+N Q L + V+
Sbjct: 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYRTPFVV 127
Query: 532 LLNK-ELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEK 590
NK + +P + +K D++ Q++ + + + L + + +
Sbjct: 128 AANKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVTD 187
Query: 591 VIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQEMVDRELEL 637
SI+PISA T I +L +L Q+ + +L++
Sbjct: 188 FASQVSIIPISAITG--------EGIPELLTMLMGLAQQYLREQLKI 226
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 47.9 bits (112), Expect = 7e-07
Identities = 16/179 (8%), Positives = 46/179 (25%), Gaps = 24/179 (13%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ G NAGKS+ L ++ + + + + D +++ G E
Sbjct: 19 VAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVP 78
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ L + + V + + ++ L+
Sbjct: 79 EEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM-----IEWAVDSNIAVLVL 133
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 357
+ + L+ +++ + + + Q + S+
Sbjct: 134 LTKADKLASGARK----------AQLNMVREAVLAFNGDVQ---------VETFSSLKK 173
Score = 47.9 bits (112), Expect = 7e-07
Identities = 16/179 (8%), Positives = 46/179 (25%), Gaps = 24/179 (13%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ G NAGKS+ L ++ + + + + D +++ G E
Sbjct: 19 VAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVP 78
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ L + + V + + ++ L+
Sbjct: 79 EEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQM-----IEWAVDSNIAVLVL 133
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 605
+ + L+ +++ + + + Q + S+
Sbjct: 134 LTKADKLASGARK----------AQLNMVREAVLAFNGDVQ---------VETFSSLKK 173
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 46.7 bits (109), Expect = 1e-06
Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 36/194 (18%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ + G PNAGKS+ L A++ I + T + + D + + D
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTA------ 57
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ER D F + E +
Sbjct: 58 GLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDP-----AEIWPEFIARLPAK 112
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 358
PI ++ NK D+ G + +++ +SA+T
Sbjct: 113 LPITVVRNKADITGETLGM------------------------SEVNGHALIRLSARTG- 147
Query: 359 TDVNDAKLKIRSIL 372
V+ + ++ +
Sbjct: 148 EGVDVLRNHLKQSM 161
Score = 46.7 bits (109), Expect = 1e-06
Identities = 28/194 (14%), Positives = 55/194 (28%), Gaps = 36/194 (18%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ + G PNAGKS+ L A++ I + T + + D + + D
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTA------ 57
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ER D F + E +
Sbjct: 58 GLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDP-----AEIWPEFIARLPAK 112
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 606
PI ++ NK D+ G + +++ +SA+T
Sbjct: 113 LPITVVRNKADITGETLGM------------------------SEVNGHALIRLSARTG- 147
Query: 607 TDVNDAKLKIRSIL 620
V+ + ++ +
Sbjct: 148 EGVDVLRNHLKQSM 161
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 45.9 bits (107), Expect = 3e-06
Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIAS-YPFTTIKPNVGVITFDDFRKMSVADLPGLIEG 237
+ +VG PN GKST L + + S P TT K G++T + + V
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 238 AHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN-L 296
M + + + +VD+ ++ ++ L +
Sbjct: 68 DALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 127
Query: 297 LEKPIILLVNKMDVEGAQEIY-------DGIRDTLHNLKDHI----HKYPE 336
+ P + ++ E + + +L + YPE
Sbjct: 128 AKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPE 178
Score = 45.9 bits (107), Expect = 3e-06
Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 13/171 (7%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIAS-YPFTTIKPNVGVITFDDFRKMSVADLPGLIEG 485
+ +VG PN GKST L + + S P TT K G++T + + V
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 67
Query: 486 AHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN-L 544
M + + + +VD+ ++ ++ L +
Sbjct: 68 DALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDA 127
Query: 545 LEKPIILLVNKMDVEGAQEIY-------DGIRDTLHNLKDHI----HKYPE 584
+ P + ++ E + + +L + YPE
Sbjct: 128 AKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPE 178
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 45.4 bits (106), Expect = 6e-06
Identities = 23/164 (14%), Positives = 50/164 (30%), Gaps = 17/164 (10%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I + G N+GK++ L ++ + P + + +D L
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVR----PTVVSQEPLSAADYDGSG----VTLVDFPGHV 57
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ + K + +VD L V+ + + E
Sbjct: 58 KLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENG------ 111
Query: 299 KPIILLVNKMDVEGA---QEIYDGIRDTLHNLKDHIHKYPEEFQ 339
I++ NK ++ A +I D + + + + K E +
Sbjct: 112 IDILIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVE 155
Score = 45.4 bits (106), Expect = 6e-06
Identities = 23/164 (14%), Positives = 50/164 (30%), Gaps = 17/164 (10%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I + G N+GK++ L ++ + P + + +D L
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVR----PTVVSQEPLSAADYDGSG----VTLVDFPGHV 57
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ + K + +VD L V+ + + E
Sbjct: 58 KLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENG------ 111
Query: 547 KPIILLVNKMDVEGA---QEIYDGIRDTLHNLKDHIHKYPEEFQ 587
I++ NK ++ A +I D + + + + K E +
Sbjct: 112 IDILIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVE 155
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 45.2 bits (106), Expect = 1e-05
Identities = 25/226 (11%), Positives = 67/226 (29%), Gaps = 16/226 (7%)
Query: 427 IGLVGFPNAGKSTFLKAIS-RARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEG 485
I ++G GKS+ + +I I+ + +P + + +++ D PGLIEG
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSR-AGFTLNIIDTPGLIEG 93
Query: 486 AHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLL 545
+ N + + + ++ + + + + + +
Sbjct: 94 GYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIW------ 147
Query: 546 EKPIILLVNKMDV--EGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 603
I+ + + L + + + +L ++
Sbjct: 148 -NKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSG 206
Query: 604 TNSTDVNDAKLKIRSILDLLAEEEQEMVDRELELVKKLKSSLREHQ 649
+ + +D K +L +V E+ S+ +
Sbjct: 207 RCNKNDSDEK-----VLPNGIAWIPHLVQTITEVALNKSESIFVDK 247
Score = 43.6 bits (102), Expect = 3e-05
Identities = 23/226 (10%), Positives = 71/226 (31%), Gaps = 21/226 (9%)
Query: 179 IGLVGFPNAGKSTFLKAIS-RARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEG 237
I ++G GKS+ + +I I+ + +P + + +++ D PGLIEG
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSR-AGFTLNIIDTPGLIEG 93
Query: 238 AHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLL 297
+ N + + + ++ + + + + + +
Sbjct: 94 GYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIW------ 147
Query: 298 EKPIILLVNKMDV--EGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK 355
I+ + + L + + + +L ++
Sbjct: 148 -NKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSG 206
Query: 356 TNSTDVNDAKLK----------IRSILDLLAEEEQEMVDRELELDS 391
+ + +D K+ +++I ++ + + + + +D
Sbjct: 207 RCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDK 252
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 43.6 bits (101), Expect = 2e-05
Identities = 21/195 (10%), Positives = 51/195 (26%), Gaps = 26/195 (13%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I L G N GKS+F+ ++ + + + +D G + +
Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVS 85
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ + T+ V + +
Sbjct: 86 KSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMY-----------EFLKYYG 134
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 358
P+I++ K D + + L ++ S++T
Sbjct: 135 IPVIVIATKADKIPKGKWDKHAKVVRQTLNID--------------PEDELILFSSETK- 179
Query: 359 TDVNDAKLKIRSILD 373
++A I+ +++
Sbjct: 180 KGKDEAWGAIKKMIN 194
Score = 43.6 bits (101), Expect = 2e-05
Identities = 21/195 (10%), Positives = 51/195 (26%), Gaps = 26/195 (13%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I L G N GKS+F+ ++ + + + +D G + +
Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVS 85
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ + T+ V + +
Sbjct: 86 KSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMY-----------EFLKYYG 134
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 606
P+I++ K D + + L ++ S++T
Sbjct: 135 IPVIVIATKADKIPKGKWDKHAKVVRQTLNID--------------PEDELILFSSETK- 179
Query: 607 TDVNDAKLKIRSILD 621
++A I+ +++
Sbjct: 180 KGKDEAWGAIKKMIN 194
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 43.3 bits (101), Expect = 5e-05
Identities = 33/185 (17%), Positives = 55/185 (29%), Gaps = 21/185 (11%)
Query: 179 IGLVGFPNAGKSTFLKAISR----ARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL 234
+G+ G P GKST + A+ A K+A G D +M+ L
Sbjct: 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMA--RLAID 111
Query: 235 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHP--------------KRSCVE 280
R +T+ ++ + GF + L V
Sbjct: 112 RNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVL 171
Query: 281 TVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP 340
+ EL+ K + E ++ VNK D + + + HI P
Sbjct: 172 MLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRAS-AAASEYRAALHILTPPSATWT 230
Query: 341 EKVIK 345
V+
Sbjct: 231 PPVVT 235
Score = 43.3 bits (101), Expect = 5e-05
Identities = 33/185 (17%), Positives = 55/185 (29%), Gaps = 21/185 (11%)
Query: 427 IGLVGFPNAGKSTFLKAISR----ARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL 482
+G+ G P GKST + A+ A K+A G D +M+ L
Sbjct: 54 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMA--RLAID 111
Query: 483 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHP--------------KRSCVE 528
R +T+ ++ + GF + L V
Sbjct: 112 RNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVL 171
Query: 529 TVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP 588
+ EL+ K + E ++ VNK D + + + HI P
Sbjct: 172 MLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRAS-AAASEYRAALHILTPPSATWT 230
Query: 589 EKVIK 593
V+
Sbjct: 231 PPVVT 235
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 40.4 bits (93), Expect = 4e-04
Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 46/225 (20%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNV----GVITFDDFRKMSVADLPGL 234
+ VG +GK+T R + + V + D ++V ++
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 62
Query: 235 IEGAHRNLGMGHQFL-----------------RHVERTKLIAMIVDVNGFQLGLKHPKRS 277
G + + + L + + G++ +
Sbjct: 63 GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENL 122
Query: 278 CVETVLLL--------------NKELELYKMNLLEKPIILLVNKMDVEGAQEI--YDGIR 321
V+ + + L L I +NK+D+ +E +
Sbjct: 123 PYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYF 182
Query: 322 DTLHNLKDHIHKYPEEFQ---------PEKVIKFQSILPISAKTN 357
+ + L + P +V+ +L +SAKT
Sbjct: 183 EDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTR 227
Score = 40.4 bits (93), Expect = 4e-04
Identities = 28/225 (12%), Positives = 61/225 (27%), Gaps = 46/225 (20%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNV----GVITFDDFRKMSVADLPGL 482
+ VG +GK+T R + + V + D ++V ++
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 62
Query: 483 IEGAHRNLGMGHQFL-----------------RHVERTKLIAMIVDVNGFQLGLKHPKRS 525
G + + + L + + G++ +
Sbjct: 63 GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENL 122
Query: 526 CVETVLLL--------------NKELELYKMNLLEKPIILLVNKMDVEGAQEI--YDGIR 569
V+ + + L L I +NK+D+ +E +
Sbjct: 123 PYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYF 182
Query: 570 DTLHNLKDHIHKYPEEFQ---------PEKVIKFQSILPISAKTN 605
+ + L + P +V+ +L +SAKT
Sbjct: 183 EDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTR 227
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 39.1 bits (90), Expect = 6e-04
Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 40/208 (19%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
K++ L+G GKS L +R + S ++ I D +
Sbjct: 5 FKVV----LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
G R + + R L+ I ++ + K EL
Sbjct: 61 A---GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLK--------------ELR 103
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
I+L+ NK D+ + +E + S +
Sbjct: 104 DHADSNIVIMLVGNKSDL-----------------RHLRAVPTDEARAFAEKNNLSFIET 146
Query: 353 SAKTNSTDVNDAKLKI-RSILDLLAEEE 379
SA + T+V +A I I ++++++
Sbjct: 147 SALDS-TNVEEAFKNILTEIYRIVSQKQ 173
Score = 39.1 bits (90), Expect = 6e-04
Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 40/208 (19%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
K++ L+G GKS L +R + S ++ I D +
Sbjct: 5 FKVV----LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
G R + + R L+ I ++ + K EL
Sbjct: 61 A---GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLK--------------ELR 103
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
I+L+ NK D+ + +E + S +
Sbjct: 104 DHADSNIVIMLVGNKSDL-----------------RHLRAVPTDEARAFAEKNNLSFIET 146
Query: 601 SAKTNSTDVNDAKLKI-RSILDLLAEEE 627
SA + T+V +A I I ++++++
Sbjct: 147 SALDS-TNVEEAFKNILTEIYRIVSQKQ 173
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 38.5 bits (88), Expect = 7e-04
Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 36/199 (18%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ +G NAGK+T L + R T++P + + ++
Sbjct: 3 LLFLGLDNAGKTTLLHMLKNDR-------LATLQPTWHPTSEELAIG----NIKFTTFDL 51
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
++ + + I +VD + + L +
Sbjct: 52 GGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALF----------NIAELKD 101
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 358
P ++L NK+D A + +R L L + E +P +V S
Sbjct: 102 VPFVILGNKIDAPNAVSEAE-LRSALGLLNTTGSQRIEGQRPVEVF------MCSVVMR- 153
Query: 359 TDVNDAKLKIRSILDLLAE 377
+A L++
Sbjct: 154 NGYLEA-------FQWLSQ 165
Score = 38.5 bits (88), Expect = 7e-04
Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 36/199 (18%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ +G NAGK+T L + R T++P + + ++
Sbjct: 3 LLFLGLDNAGKTTLLHMLKNDR-------LATLQPTWHPTSEELAIG----NIKFTTFDL 51
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
++ + + I +VD + + L +
Sbjct: 52 GGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALF----------NIAELKD 101
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 606
P ++L NK+D A + +R L L + E +P +V S
Sbjct: 102 VPFVILGNKIDAPNAVSEAE-LRSALGLLNTTGSQRIEGQRPVEVF------MCSVVMR- 153
Query: 607 TDVNDAKLKIRSILDLLAE 625
+A L++
Sbjct: 154 NGYLEA-------FQWLSQ 165
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 39.5 bits (91), Expect = 9e-04
Identities = 44/239 (18%), Positives = 80/239 (33%), Gaps = 29/239 (12%)
Query: 427 IGLVGFPNAGKSTFLKAISRARP----KIASYPFTTIKPNVGVITFDDFRKMSVADLPGL 482
+G+ G P AGKSTFL+A K+A P G D +M+ DL
Sbjct: 57 LGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMN--DLARA 114
Query: 483 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSC---------VETVLLL 533
R + +R + + ++ + G+ + + V+ + L
Sbjct: 115 EAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISL 174
Query: 534 N-----KELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP 588
+L+ K L+E ++++NK D + + L KY E
Sbjct: 175 QIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPR 234
Query: 589 EKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQEMVDRELELVKKLKSSLRE 647
+L SA +++ I L + R+ + V+ L+ E
Sbjct: 235 --------VLTCSALEK-RGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEE 284
Score = 37.5 bits (86), Expect = 0.004
Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 28/197 (14%)
Query: 179 IGLVGFPNAGKSTFLKAISRARP----KIASYPFTTIKPNVGVITFDDFRKMSVADLPGL 234
+G+ G P AGKSTFL+A K+A P G D +M+ DL
Sbjct: 57 LGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMN--DLARA 114
Query: 235 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSC---------VETVLLL 285
R + +R + + ++ + G+ + + V+ + L
Sbjct: 115 EAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISL 174
Query: 286 N-----KELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP 340
+L+ K L+E ++++NK D + + L KY E
Sbjct: 175 QIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPR 234
Query: 341 EKVIKFQSILPISAKTN 357
+L SA
Sbjct: 235 --------VLTCSALEK 243
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 39.8 bits (92), Expect = 9e-04
Identities = 30/231 (12%), Positives = 70/231 (30%), Gaps = 30/231 (12%)
Query: 426 DIGLVGFPNAGKSTFLKAISRARPKI-----ASYPFTTIKPNVGVITFDDFRKMSVADLP 480
++ + G +GKS+F+ + + T++ + + + DLP
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERH--PYKHPNIPNVVFWDLP 115
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
G+ +L ++ + I+ + + + K + +
Sbjct: 116 GIGSTNFPP----DTYLEKMKFYEYDFFIIISAT----------RFKKNDIDIAKAISMM 161
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDT-LHNLKDHIHKYPEEFQPEKVIKFQSILP 599
K K + K+D + E + + I E I I
Sbjct: 162 K-----KEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFL 216
Query: 600 ISAKTNST-DVNDAKLKIRSILDLLAEEE--QEMVDRELELVKKLKSSLRE 647
+S K D K+ S L + + + +++K + L++
Sbjct: 217 LSNKNVCHYDFPVLMDKLISDLPIYKRHNFMVSLPNITDSVIEKKRQFLKQ 267
Score = 39.8 bits (92), Expect = 0.001
Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 27/185 (14%)
Query: 178 DIGLVGFPNAGKSTFLKAISRARPKI-----ASYPFTTIKPNVGVITFDDFRKMSVADLP 232
++ + G +GKS+F+ + + T++ + + + DLP
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERH--PYKHPNIPNVVFWDLP 115
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
G+ +L ++ + I+ + + + K + +
Sbjct: 116 GIGSTNFPP----DTYLEKMKFYEYDFFIIISAT----------RFKKNDIDIAKAISMM 161
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDT-LHNLKDHIHKYPEEFQPEKVIKFQSILP 351
K K + K+D + E + + I E I I
Sbjct: 162 K-----KEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFL 216
Query: 352 ISAKT 356
+S K
Sbjct: 217 LSNKN 221
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 38.5 bits (89), Expect = 0.001
Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 39/210 (18%)
Query: 179 IGLVGFPNAGKSTFLKAISR-------ARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
+G +G + GK+T AI++ A+ K + IT + V
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAA---HVEYS 62
Query: 232 PGLIEGAHRNLGMGHQFLRHVER----TKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNK 287
AH + +++++ ++V N + LLL +
Sbjct: 63 TAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAR 115
Query: 288 ELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQ 347
++ + +++ VNK D E+ + + + L EE
Sbjct: 116 QIGVE-------HVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETP-------- 160
Query: 348 SILPISAKT--NSTDVNDAKLKIRSILDLL 375
I+ SA D ++ +LD +
Sbjct: 161 -IIVGSALCALEQRDPELGLKSVQKLLDAV 189
Score = 38.5 bits (89), Expect = 0.001
Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 39/210 (18%)
Query: 427 IGLVGFPNAGKSTFLKAISR-------ARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
+G +G + GK+T AI++ A+ K + IT + V
Sbjct: 6 VGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAA---HVEYS 62
Query: 480 PGLIEGAHRNLGMGHQFLRHVER----TKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNK 535
AH + +++++ ++V N + LLL +
Sbjct: 63 TAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLAR 115
Query: 536 ELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQ 595
++ + +++ VNK D E+ + + + L EE
Sbjct: 116 QIGVE-------HVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEETP-------- 160
Query: 596 SILPISAKT--NSTDVNDAKLKIRSILDLL 623
I+ SA D ++ +LD +
Sbjct: 161 -IIVGSALCALEQRDPELGLKSVQKLLDAV 189
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 37.6 bits (86), Expect = 0.002
Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 21/197 (10%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL---- 234
I +VG P GK+ K ++R I +R+ V
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNF--------IGVPTREFNVGQYRRDMVKTYKSFEFFL 56
Query: 235 ---IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
EG L V + +R+ + N
Sbjct: 57 PDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTF 116
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGI--RDTLHNLKDHIHKYPEEFQP---EKVIKF 346
+ ++ P ++ N + V+ Y + + I Y ++ E+
Sbjct: 117 FVESICVDPEVIAANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSYESLDEEQDRDL 176
Query: 347 QSILPISAKTNSTDVND 363
I + S VN
Sbjct: 177 SYIKIMDV-GQSYVVNR 192
Score = 37.6 bits (86), Expect = 0.002
Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 21/197 (10%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL---- 482
I +VG P GK+ K ++R I +R+ V
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLNF--------IGVPTREFNVGQYRRDMVKTYKSFEFFL 56
Query: 483 ---IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
EG L V + +R+ + N
Sbjct: 57 PDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTF 116
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGI--RDTLHNLKDHIHKYPEEFQP---EKVIKF 594
+ ++ P ++ N + V+ Y + + I Y ++ E+
Sbjct: 117 FVESICVDPEVIAANIVQVKLGSPDYVNRDSDEATEDFMRRIECYENSYESLDEEQDRDL 176
Query: 595 QSILPISAKTNSTDVND 611
I + S VN
Sbjct: 177 SYIKIMDV-GQSYVVNR 192
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 37.2 bits (86), Expect = 0.003
Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 25/161 (15%)
Query: 179 IGLVGFPNAGKSTFLKAISRARP------KIASYPFTTIKPNVGVI--TFDDFRKMSVAD 230
+ G GK+T LK IS P T +K + + RK+SV D
Sbjct: 30 VNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVED 89
Query: 231 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 290
L I ++ + + K+ E + ++
Sbjct: 90 ----------YLKAVASLYGVKVNKNEIMDALE----SVEVLDLKKKLGELSQGTIRRVQ 135
Query: 291 LYKMNLLEKPIILL---VNKMDVEGAQEIYDGIRDTLHNLK 328
L L+ I +L V +D + ++ I + L
Sbjct: 136 LASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKG 176
Score = 37.2 bits (86), Expect = 0.003
Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 25/161 (15%)
Query: 427 IGLVGFPNAGKSTFLKAISRARP------KIASYPFTTIKPNVGVI--TFDDFRKMSVAD 478
+ G GK+T LK IS P T +K + + RK+SV D
Sbjct: 30 VNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVED 89
Query: 479 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 538
L I ++ + + K+ E + ++
Sbjct: 90 ----------YLKAVASLYGVKVNKNEIMDALE----SVEVLDLKKKLGELSQGTIRRVQ 135
Query: 539 LYKMNLLEKPIILL---VNKMDVEGAQEIYDGIRDTLHNLK 576
L L+ I +L V +D + ++ I + L
Sbjct: 136 LASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKG 176
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 36.2 bits (82), Expect = 0.004
Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 47/207 (22%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
EL+L+ ++G NAGK+T LK + TI P +G + ++
Sbjct: 2 ELRLL----MLGLDNAGKTTILKKFNGED-------VDTISPTLGFNIKTLEHRGFKLNI 50
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G + LR R +G + R ++ + L +
Sbjct: 51 ---------WDVGGQKSLRSYWR----NYFESTDGLIWVVDSADRQRMQDCQRELQSLLV 97
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+ L +++ NK D+ GA I
Sbjct: 98 EER-LAGATLLIFANKQDLPGALSCNAIQE--------------ALELDSIRSHHWRIQG 142
Query: 352 ISAKTNSTDVNDAKLKIRSILDLLAEE 378
SA T D+ +D L ++
Sbjct: 143 CSAVTG-EDLLPG-------IDWLLDD 161
Score = 36.2 bits (82), Expect = 0.004
Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 47/207 (22%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
EL+L+ ++G NAGK+T LK + TI P +G + ++
Sbjct: 2 ELRLL----MLGLDNAGKTTILKKFNGED-------VDTISPTLGFNIKTLEHRGFKLNI 50
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G + LR R +G + R ++ + L +
Sbjct: 51 ---------WDVGGQKSLRSYWR----NYFESTDGLIWVVDSADRQRMQDCQRELQSLLV 97
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+ L +++ NK D+ GA I
Sbjct: 98 EER-LAGATLLIFANKQDLPGALSCNAIQE--------------ALELDSIRSHHWRIQG 142
Query: 600 ISAKTNSTDVNDAKLKIRSILDLLAEE 626
SA T D+ +D L ++
Sbjct: 143 CSAVTG-EDLLPG-------IDWLLDD 161
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 35.8 bits (81), Expect = 0.009
Identities = 27/186 (14%), Positives = 47/186 (25%), Gaps = 27/186 (14%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
KL+ +G NAGK+T L + R +
Sbjct: 13 TGKLV----FLGLDNAGKTTLLHMLKDDRLGQ-----HVPTLHPTSEELTIAGMTFTTFD 63
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G A + ++ I +VD + L+ +
Sbjct: 64 LGGHIQAR------RVWKNYLPAINGIVFLVDCADHERLLESKEELDSLM---------- 107
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+ PI++L NK+D A +R+ L E + +
Sbjct: 108 TDETIANVPILILGNKIDRPEAISEER-LREMF-GLYGQTTGKGSVSLKELNARPLEVFM 165
Query: 352 ISAKTN 357
S
Sbjct: 166 CSVLKR 171
Score = 35.8 bits (81), Expect = 0.009
Identities = 27/186 (14%), Positives = 47/186 (25%), Gaps = 27/186 (14%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
KL+ +G NAGK+T L + R +
Sbjct: 13 TGKLV----FLGLDNAGKTTLLHMLKDDRLGQ-----HVPTLHPTSEELTIAGMTFTTFD 63
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G A + ++ I +VD + L+ +
Sbjct: 64 LGGHIQAR------RVWKNYLPAINGIVFLVDCADHERLLESKEELDSLM---------- 107
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+ PI++L NK+D A +R+ L E + +
Sbjct: 108 TDETIANVPILILGNKIDRPEAISEER-LREMF-GLYGQTTGKGSVSLKELNARPLEVFM 165
Query: 600 ISAKTN 605
S
Sbjct: 166 CSVLKR 171
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 34.7 bits (78), Expect = 0.014
Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 38/186 (20%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E++L LVG +GK+TF+ I+ + P + + D+
Sbjct: 2 EMELT----LVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR---KITKGNVTIKLWDI 54
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G V + ++
Sbjct: 55 GGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ----------- 103
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
P+++L NK D+ GA + K+ I K ++ I
Sbjct: 104 ------GIPVLVLGNKRDLPGALDE-----------KELIEKMNLSAIQDREICC---YS 143
Query: 352 ISAKTN 357
IS K
Sbjct: 144 ISCKEK 149
Score = 34.7 bits (78), Expect = 0.014
Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 38/186 (20%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E++L LVG +GK+TF+ I+ + P + + D+
Sbjct: 2 EMELT----LVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR---KITKGNVTIKLWDI 54
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G V + ++
Sbjct: 55 GGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ----------- 103
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
P+++L NK D+ GA + K+ I K ++ I
Sbjct: 104 ------GIPVLVLGNKRDLPGALDE-----------KELIEKMNLSAIQDREICC---YS 143
Query: 600 ISAKTN 605
IS K
Sbjct: 144 ISCKEK 149
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 34.3 bits (77), Expect = 0.025
Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 33/201 (16%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
LK+I ++G GK++ + + Y T + D K++ +
Sbjct: 3 LKVI----ILGDSGVGKTSLMHRYVNDKY-SQQYKATIGADFLTKEVTVDGDKVATMQVW 57
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
G R +G F R + L+ + + + F+ V
Sbjct: 58 D-TAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLV----------HAN 106
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
+ P ++L NK+D E ++ I + K + +
Sbjct: 107 VNSPETFPFVILGNKIDAEESK---------------KIVSEKSAQELAKSLGDIPLFLT 151
Query: 353 SAKTNSTDVNDAKLKI-RSIL 372
SAK +V+ A +I RS L
Sbjct: 152 SAKNA-INVDTAFEEIARSAL 171
Score = 34.3 bits (77), Expect = 0.025
Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 33/201 (16%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
LK+I ++G GK++ + + Y T + D K++ +
Sbjct: 3 LKVI----ILGDSGVGKTSLMHRYVNDKY-SQQYKATIGADFLTKEVTVDGDKVATMQVW 57
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
G R +G F R + L+ + + + F+ V
Sbjct: 58 D-TAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLV----------HAN 106
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
+ P ++L NK+D E ++ I + K + +
Sbjct: 107 VNSPETFPFVILGNKIDAEESK---------------KIVSEKSAQELAKSLGDIPLFLT 151
Query: 601 SAKTNSTDVNDAKLKI-RSIL 620
SAK +V+ A +I RS L
Sbjct: 152 SAKNA-INVDTAFEEIARSAL 171
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 33.8 bits (76), Expect = 0.030
Identities = 15/162 (9%), Positives = 38/162 (23%), Gaps = 15/162 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARP----KIASYPFTTIKPNVGVITFDDFRKMS-----VA 229
+ + GK+T LK + A + T +V D +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 230 DLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSC------VETVL 283
+ +++ +D+ +
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 284 LLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLH 325
+ P+ L V +D+ + + D + + +
Sbjct: 125 EELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQ 166
Score = 33.8 bits (76), Expect = 0.030
Identities = 15/162 (9%), Positives = 38/162 (23%), Gaps = 15/162 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARP----KIASYPFTTIKPNVGVITFDDFRKMS-----VA 477
+ + GK+T LK + A + T +V D +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 478 DLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSC------VETVL 531
+ +++ +D+ +
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 532 LLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLH 573
+ P+ L V +D+ + + D + + +
Sbjct: 125 EELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQ 166
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 239
Score = 34.2 bits (78), Expect = 0.032
Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 38/228 (16%)
Query: 179 IGLVGFPNAGKSTFLKAI---SRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL- 234
+ ++G ++GKST + K F +G +F +
Sbjct: 9 VVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERER 68
Query: 235 ---IEGAHRNLGM-----------GH-QFLRHVERTKLIA----MIVDVNGFQLGLKHPK 275
I+ A GH F++++ A +I+ + K
Sbjct: 69 GITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISK 128
Query: 276 RSCVETVLLLNKELELYKMNLLEKPIILLVNKMD-VEGAQEIYDGIRDTLHNLKDHIHKY 334
LL L + + +I+ VNKMD V+ + + I N +
Sbjct: 129 DGQTREHALLAFTLGV-------RQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYN 181
Query: 335 PEEFQPEKV--IKFQSILPISAKT-----NSTDVNDAKLKIRSILDLL 375
P+ + +++ + + +K +++L+ +
Sbjct: 182 PKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAI 229
Score = 34.2 bits (78), Expect = 0.032
Identities = 32/228 (14%), Positives = 70/228 (30%), Gaps = 38/228 (16%)
Query: 427 IGLVGFPNAGKSTFLKAI---SRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL- 482
+ ++G ++GKST + K F +G +F +
Sbjct: 9 VVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERER 68
Query: 483 ---IEGAHRNLGM-----------GH-QFLRHVERTKLIA----MIVDVNGFQLGLKHPK 523
I+ A GH F++++ A +I+ + K
Sbjct: 69 GITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISK 128
Query: 524 RSCVETVLLLNKELELYKMNLLEKPIILLVNKMD-VEGAQEIYDGIRDTLHNLKDHIHKY 582
LL L + + +I+ VNKMD V+ + + I N +
Sbjct: 129 DGQTREHALLAFTLGV-------RQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYN 181
Query: 583 PEEFQPEKV--IKFQSILPISAKT-----NSTDVNDAKLKIRSILDLL 623
P+ + +++ + + +K +++L+ +
Sbjct: 182 PKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAI 229
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 33.8 bits (76), Expect = 0.032
Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 43/208 (20%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
EL+++ ++G AGK+T L ++ T KP +G + +S +L
Sbjct: 17 ELRIL----ILGLDGAGKTTILY-------RLQIGEVVTTKPTIGF----NVETLSYKNL 61
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
+ + + + T + +VD + + + L+ +E EL
Sbjct: 62 KLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDK-----DRMSTASKELHLMLQEEEL 116
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+++ NK D GA + + + ++
Sbjct: 117 QDAA-----LLVFANKQDQPGA-----------LSASEVSKELNLVELKDRSWSIV---A 157
Query: 352 ISAKTNSTDVNDAKLKIRSILDLLAEEE 379
SA + + + ++D++ EE+
Sbjct: 158 SSAIKG-EGITEG---LDWLIDVIKEEQ 181
Score = 33.8 bits (76), Expect = 0.032
Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 43/208 (20%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
EL+++ ++G AGK+T L ++ T KP +G + +S +L
Sbjct: 17 ELRIL----ILGLDGAGKTTILY-------RLQIGEVVTTKPTIGF----NVETLSYKNL 61
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
+ + + + T + +VD + + + L+ +E EL
Sbjct: 62 KLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDK-----DRMSTASKELHLMLQEEEL 116
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+++ NK D GA + + + ++
Sbjct: 117 QDAA-----LLVFANKQDQPGA-----------LSASEVSKELNLVELKDRSWSIV---A 157
Query: 600 ISAKTNSTDVNDAKLKIRSILDLLAEEE 627
SA + + + ++D++ EE+
Sbjct: 158 SSAIKG-EGITEG---LDWLIDVIKEEQ 181
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 33.8 bits (76), Expect = 0.037
Identities = 32/212 (15%), Positives = 71/212 (33%), Gaps = 21/212 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
IG+ G +GKS+ I + + + V +++ D F ++ ++
Sbjct: 5 IGVSGGTASGKSSVCAKIVQ---LLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKG 61
Query: 239 HRNLGM------GHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKE---- 288
N E T+ + + V F + + V ++ E
Sbjct: 62 QFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILA 121
Query: 289 LELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP--EKVIKF 346
++ L + + + D ++ + I + +L+ + +Y +P E+
Sbjct: 122 FYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLP 181
Query: 347 QS-----ILPISAKTNSTDVNDAKLKIRSILD 373
I+P A N +N I+ IL+
Sbjct: 182 TKKYADVIIPRGAD-NLVAINLIVQHIQDILN 212
Score = 33.8 bits (76), Expect = 0.037
Identities = 32/212 (15%), Positives = 71/212 (33%), Gaps = 21/212 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
IG+ G +GKS+ I + + + V +++ D F ++ ++
Sbjct: 5 IGVSGGTASGKSSVCAKIVQ---LLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKG 61
Query: 487 HRNLGM------GHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKE---- 536
N E T+ + + V F + + V ++ E
Sbjct: 62 QFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILA 121
Query: 537 LELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP--EKVIKF 594
++ L + + + D ++ + I + +L+ + +Y +P E+
Sbjct: 122 FYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLP 181
Query: 595 QS-----ILPISAKTNSTDVNDAKLKIRSILD 621
I+P A N +N I+ IL+
Sbjct: 182 TKKYADVIIPRGAD-NLVAINLIVQHIQDILN 212
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 33.8 bits (76), Expect = 0.037
Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 47/207 (22%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E++++ L+G NAGK+T LK ++ + + + +
Sbjct: 16 EVRIL----LLGLDNAGKTTLLKQLASEDISHITPT-----------QGFNIKSVQSQGF 60
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
+ + + + E T ++ ++D ++ ET L + LE
Sbjct: 61 KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDS--------ADRKRFEETGQELTELLEE 112
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
K++ P+++ NK D+ A + ++V + Q
Sbjct: 113 EKLS--CVPVLIFANKQDLLTAAPA-----------SEIAEGLNLHTIRDRVWQIQ---S 156
Query: 352 ISAKTNSTDVNDAKLKIRSILDLLAEE 378
SA T V D ++ + +
Sbjct: 157 CSALTG-EGVQDG-------MNWVCKN 175
Score = 33.8 bits (76), Expect = 0.037
Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 47/207 (22%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E++++ L+G NAGK+T LK ++ + + + +
Sbjct: 16 EVRIL----LLGLDNAGKTTLLKQLASEDISHITPT-----------QGFNIKSVQSQGF 60
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
+ + + + E T ++ ++D ++ ET L + LE
Sbjct: 61 KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDS--------ADRKRFEETGQELTELLEE 112
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
K++ P+++ NK D+ A + ++V + Q
Sbjct: 113 EKLS--CVPVLIFANKQDLLTAAPA-----------SEIAEGLNLHTIRDRVWQIQ---S 156
Query: 600 ISAKTNSTDVNDAKLKIRSILDLLAEE 626
SA T V D ++ + +
Sbjct: 157 CSALTG-EGVQDG-------MNWVCKN 175
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 33.2 bits (75), Expect = 0.049
Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 41/197 (20%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 231
K++ L+G GK+ ++ ++ + + + + + K+ + D
Sbjct: 6 FKIV----LIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 61
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G R + + R L I F+ + L
Sbjct: 62 A----GQERFRSITQSYYRSANALILTYDITCEESFRCLPEW---------------LRE 102
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+ K I +LV G + L ++ + EEF + + + L
Sbjct: 103 IEQYASNKVITVLV-------------GNKIDLAERREVSQQRAEEFSEAQDMYY---LE 146
Query: 352 ISAKTNSTDVNDAKLKI 368
SAK + +V L +
Sbjct: 147 TSAKES-DNVEKLFLDL 162
Score = 33.2 bits (75), Expect = 0.049
Identities = 29/197 (14%), Positives = 60/197 (30%), Gaps = 41/197 (20%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 479
K++ L+G GK+ ++ ++ + + + + + K+ + D
Sbjct: 6 FKIV----LIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 61
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G R + + R L I F+ + L
Sbjct: 62 A----GQERFRSITQSYYRSANALILTYDITCEESFRCLPEW---------------LRE 102
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+ K I +LV G + L ++ + EEF + + + L
Sbjct: 103 IEQYASNKVITVLV-------------GNKIDLAERREVSQQRAEEFSEAQDMYY---LE 146
Query: 600 ISAKTNSTDVNDAKLKI 616
SAK + +V L +
Sbjct: 147 TSAKES-DNVEKLFLDL 162
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 33.1 bits (74), Expect = 0.054
Identities = 32/202 (15%), Positives = 57/202 (28%), Gaps = 28/202 (13%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
+K + +VG GK+ L + + P + V+ + + D
Sbjct: 5 AIKCV----VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWD- 59
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
Q R + S + K
Sbjct: 60 ------------TAGQEDYDRLRPLSYPQTDVSL-----ICFSLVSPASFENVRAKWYPE 102
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+ + PIIL+ K+D+ ++ + L K YP+ K I L
Sbjct: 103 VRHHCPNTPIILVGTKLDLRDDKD----TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 158
Query: 352 ISAKTNSTDVNDAKLK-IRSIL 372
SA T + + IR++L
Sbjct: 159 CSALTQ-RGLKTVFDEAIRAVL 179
Score = 33.1 bits (74), Expect = 0.054
Identities = 32/202 (15%), Positives = 57/202 (28%), Gaps = 28/202 (13%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
+K + +VG GK+ L + + P + V+ + + D
Sbjct: 5 AIKCV----VVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWD- 59
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
Q R + S + K
Sbjct: 60 ------------TAGQEDYDRLRPLSYPQTDVSL-----ICFSLVSPASFENVRAKWYPE 102
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+ + PIIL+ K+D+ ++ + L K YP+ K I L
Sbjct: 103 VRHHCPNTPIILVGTKLDLRDDKD----TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 158
Query: 600 ISAKTNSTDVNDAKLK-IRSIL 620
SA T + + IR++L
Sbjct: 159 CSALTQ-RGLKTVFDEAIRAVL 179
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 32.4 bits (72), Expect = 0.085
Identities = 21/168 (12%), Positives = 49/168 (29%), Gaps = 11/168 (6%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E++++ ++G AGK+T L + + P F+ + L
Sbjct: 5 EMRIL----ILGLDGAGKTTILYRLQVGEVVT-TIPTIGFNVETVTYKNLKFQVWDLGGL 59
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
+ + V+ + + + L+ + V+ NK+
Sbjct: 60 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 119
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIY------DGIRDTLHNLKDHIHK 333
M E L + + Q G+ + + L + +
Sbjct: 120 QAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS 167
Score = 32.4 bits (72), Expect = 0.085
Identities = 21/168 (12%), Positives = 49/168 (29%), Gaps = 11/168 (6%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E++++ ++G AGK+T L + + P F+ + L
Sbjct: 5 EMRIL----ILGLDGAGKTTILYRLQVGEVVT-TIPTIGFNVETVTYKNLKFQVWDLGGL 59
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
+ + V+ + + + L+ + V+ NK+
Sbjct: 60 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 119
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIY------DGIRDTLHNLKDHIHK 581
M E L + + Q G+ + + L + +
Sbjct: 120 QAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKS 167
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.7 bits (71), Expect = 0.13
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
+VG+ ++GK+T ++ A
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAA 24
Score = 31.7 bits (71), Expect = 0.13
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
+VG+ ++GK+T ++ A
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAA 24
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 31.9 bits (72), Expect = 0.16
Identities = 35/222 (15%), Positives = 77/222 (34%), Gaps = 50/222 (22%)
Query: 179 IGLVGFPNAGKSTFLKAIS------RARPKIASYPFTT---------IKPNVGVITFDDF 223
+G +G + GK+T A++ ++ Y I N + ++
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 224 -RKMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIA----MIVD-VNGFQLGLKHPKRS 277
R S D PG H +++++ ++V +G
Sbjct: 66 KRHYSHVDCPG-----HA------DYIKNMITGAAQMDGAILVVSAADGPM--------P 106
Query: 278 CVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEE 337
+LL +++ + I++ +NK+D+ E+ D + + +L + +E
Sbjct: 107 QTREHILLARQVGV-------PYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 159
Query: 338 --FQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAE 377
+ + + KT + N+ KI +LD + E
Sbjct: 160 VPVIRGSALLALEQMHRNPKTRRGE-NEWVDKIWELLDAIDE 200
Score = 31.9 bits (72), Expect = 0.16
Identities = 35/222 (15%), Positives = 77/222 (34%), Gaps = 50/222 (22%)
Query: 427 IGLVGFPNAGKSTFLKAIS------RARPKIASYPFTT---------IKPNVGVITFDDF 471
+G +G + GK+T A++ ++ Y I N + ++
Sbjct: 6 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 65
Query: 472 -RKMSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIA----MIVD-VNGFQLGLKHPKRS 525
R S D PG H +++++ ++V +G
Sbjct: 66 KRHYSHVDCPG-----HA------DYIKNMITGAAQMDGAILVVSAADGPM--------P 106
Query: 526 CVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEE 585
+LL +++ + I++ +NK+D+ E+ D + + +L + +E
Sbjct: 107 QTREHILLARQVGV-------PYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 159
Query: 586 --FQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAE 625
+ + + KT + N+ KI +LD + E
Sbjct: 160 VPVIRGSALLALEQMHRNPKTRRGE-NEWVDKIWELLDAIDE 200
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 31.4 bits (70), Expect = 0.18
Identities = 30/203 (14%), Positives = 61/203 (30%), Gaps = 51/203 (25%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRAR------PKIASYPFTTIKPNVGVITFDDFRK 225
E K++ ++G GKS P I + I+ + +
Sbjct: 3 EYKVV----VLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDT 58
Query: 226 MSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLL 285
G + M ++++ + L+ +V+ FQ +
Sbjct: 59 A----------GTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQ--------- 99
Query: 286 NKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIK 345
+ + P+IL+ NK+D L + ++ E
Sbjct: 100 ----IIRVKRYEKVPVILVGNKVD--------------LESEREVSSSEGRALAEEWGCP 141
Query: 346 FQSILPISAKTNSTDVNDAKLKI 368
F + SAK+ T V++ +I
Sbjct: 142 F---METSAKSK-TMVDELFAEI 160
Score = 31.4 bits (70), Expect = 0.18
Identities = 30/203 (14%), Positives = 61/203 (30%), Gaps = 51/203 (25%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRAR------PKIASYPFTTIKPNVGVITFDDFRK 473
E K++ ++G GKS P I + I+ + +
Sbjct: 3 EYKVV----VLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDT 58
Query: 474 MSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLL 533
G + M ++++ + L+ +V+ FQ +
Sbjct: 59 A----------GTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQ--------- 99
Query: 534 NKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIK 593
+ + P+IL+ NK+D L + ++ E
Sbjct: 100 ----IIRVKRYEKVPVILVGNKVD--------------LESEREVSSSEGRALAEEWGCP 141
Query: 594 FQSILPISAKTNSTDVNDAKLKI 616
F + SAK+ T V++ +I
Sbjct: 142 F---METSAKSK-TMVDELFAEI 160
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 31.5 bits (70), Expect = 0.20
Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 30/210 (14%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
+K + +VG GK+ L + + + + P V
Sbjct: 4 IKCV----VVGDGAVGKTCLLISYTTNKFP------SEYVPTVFDNYAVTVMIG------ 47
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
G LG+ + + F + S E V K +
Sbjct: 48 ----GEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV--KEKWVPEI 101
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP-EKVIKFQSILP 351
+ + P +L+ ++D+ D PE + + +K +
Sbjct: 102 THHCPKTPFLLVGTQIDL-----RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVE 156
Query: 352 ISAKTNSTDVNDA-KLKIRSILDLLAEEEQ 380
SA T + + I + L+ ++
Sbjct: 157 CSALTQ-KGLKNVFDEAILAALEPPEPKKS 185
Score = 31.5 bits (70), Expect = 0.20
Identities = 28/210 (13%), Positives = 58/210 (27%), Gaps = 30/210 (14%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
+K + +VG GK+ L + + + + P V
Sbjct: 4 IKCV----VVGDGAVGKTCLLISYTTNKFP------SEYVPTVFDNYAVTVMIG------ 47
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
G LG+ + + F + S E V K +
Sbjct: 48 ----GEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV--KEKWVPEI 101
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQP-EKVIKFQSILP 599
+ + P +L+ ++D+ D PE + + +K +
Sbjct: 102 THHCPKTPFLLVGTQIDL-----RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVE 156
Query: 600 ISAKTNSTDVNDA-KLKIRSILDLLAEEEQ 628
SA T + + I + L+ ++
Sbjct: 157 CSALTQ-KGLKNVFDEAILAALEPPEPKKS 185
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 31.7 bits (71), Expect = 0.22
Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT-- 356
+++++NKMD Q + ++ + L + + V +P+SA T
Sbjct: 163 NHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVK----YMPVSAYTGQ 218
Query: 357 NSTDVNDAKL----KIRSILDLL 375
N D D+ + + S+L+ L
Sbjct: 219 NVKDRVDSSVCPWYQGPSLLEYL 241
Score = 31.7 bits (71), Expect = 0.22
Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT-- 604
+++++NKMD Q + ++ + L + + V +P+SA T
Sbjct: 163 NHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVK----YMPVSAYTGQ 218
Query: 605 NSTDVNDAKL----KIRSILDLL 623
N D D+ + + S+L+ L
Sbjct: 219 NVKDRVDSSVCPWYQGPSLLEYL 241
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 31.4 bits (70), Expect = 0.22
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVAD 230
LK++ ++G GKS+ L + + V I+ D + K+++ D
Sbjct: 7 TLKIL----IIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 62
Query: 231 LPG 233
G
Sbjct: 63 TAG 65
Score = 31.4 bits (70), Expect = 0.22
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVAD 478
LK++ ++G GKS+ L + + V I+ D + K+++ D
Sbjct: 7 TLKIL----IIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 62
Query: 479 LPG 481
G
Sbjct: 63 TAG 65
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 31.1 bits (69), Expect = 0.27
Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 11/113 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I + G P GK+T +K I + ++ R G
Sbjct: 3 IIITGEPGVGKTTLVKKIVER-----------LGKRAIGFWTEEVRDPETKKRTGFRIIT 51
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
+ + + V+V F+ +++ +
Sbjct: 52 TEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVII 104
Score = 31.1 bits (69), Expect = 0.27
Identities = 13/113 (11%), Positives = 28/113 (24%), Gaps = 11/113 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I + G P GK+T +K I + ++ R G
Sbjct: 3 IIITGEPGVGKTTLVKKIVER-----------LGKRAIGFWTEEVRDPETKKRTGFRIIT 51
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
+ + + V+V F+ +++ +
Sbjct: 52 TEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVII 104
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 31.0 bits (69), Expect = 0.28
Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 31/212 (14%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
+KL+ +G GK+TFL + + I + ++ +
Sbjct: 6 IKLL----ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 61
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
+ + G + R + A D GF L + V N +L
Sbjct: 62 FKVHLQLWDTA-GQERFRSLTT----AFFRDAMGFLLMFDLTSQQSFLNV--RNWMSQLQ 114
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
E P I+L+ G + L + ++ + E + I +
Sbjct: 115 ANAYCENPDIVLI-------------GNKADLPDQREVNERQARELADKYGIPY---FET 158
Query: 353 SAKTNSTDVNDAKLKIRSILDLLAEEEQEMVD 384
SA T +V A + ++LDL+ + ++ V+
Sbjct: 159 SAATG-QNVEKA---VETLLDLIMKRMEQCVE 186
Score = 31.0 bits (69), Expect = 0.28
Identities = 36/212 (16%), Positives = 70/212 (33%), Gaps = 31/212 (14%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
+KL+ +G GK+TFL + + I + ++ +
Sbjct: 6 IKLL----ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 61
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
+ + G + R + A D GF L + V N +L
Sbjct: 62 FKVHLQLWDTA-GQERFRSLTT----AFFRDAMGFLLMFDLTSQQSFLNV--RNWMSQLQ 114
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
E P I+L+ G + L + ++ + E + I +
Sbjct: 115 ANAYCENPDIVLI-------------GNKADLPDQREVNERQARELADKYGIPY---FET 158
Query: 601 SAKTNSTDVNDAKLKIRSILDLLAEEEQEMVD 632
SA T +V A + ++LDL+ + ++ V+
Sbjct: 159 SAATG-QNVEKA---VETLLDLIMKRMEQCVE 186
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.8 bits (68), Expect = 0.29
Identities = 23/204 (11%), Positives = 56/204 (27%), Gaps = 27/204 (13%)
Query: 171 LELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD 230
++ K++ +VG GK+ L ++ P T+ N D
Sbjct: 1 VKCKIV----VVGDSQCGKTALLHVFAKDCFPENYVP--TVFENYTASFEID-------- 46
Query: 231 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 290
+ + + + + + + + +L K
Sbjct: 47 --------TQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKG 98
Query: 291 LYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSIL 350
+ ++L+ K D+ + N + Y + K I + +
Sbjct: 99 EIQEFCPNTKMLLVGCKSDLRTDVSTLVEL----SNHRQTPVSYDQGANMAKQIGAATYI 154
Query: 351 PISAKTNSTDVNDA-KLKIRSILD 373
SA + V D + + ++
Sbjct: 155 ECSALQSENSVRDIFHVATLACVN 178
Score = 30.8 bits (68), Expect = 0.29
Identities = 23/204 (11%), Positives = 56/204 (27%), Gaps = 27/204 (13%)
Query: 419 LELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD 478
++ K++ +VG GK+ L ++ P T+ N D
Sbjct: 1 VKCKIV----VVGDSQCGKTALLHVFAKDCFPENYVP--TVFENYTASFEID-------- 46
Query: 479 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 538
+ + + + + + + + +L K
Sbjct: 47 --------TQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKG 98
Query: 539 LYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSIL 598
+ ++L+ K D+ + N + Y + K I + +
Sbjct: 99 EIQEFCPNTKMLLVGCKSDLRTDVSTLVEL----SNHRQTPVSYDQGANMAKQIGAATYI 154
Query: 599 PISAKTNSTDVNDA-KLKIRSILD 621
SA + V D + + ++
Sbjct: 155 ECSALQSENSVRDIFHVATLACVN 178
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 30.8 bits (68), Expect = 0.29
Identities = 26/206 (12%), Positives = 57/206 (27%), Gaps = 47/206 (22%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
++++ +VG AGK+T L + T P +G K ++
Sbjct: 1 MRIL----MVGLDAAGKTTILYKLKLGE-------IVTTIPTIGFNVETVEYKN-ISFTV 48
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
+ G + + + ++ + + D + R E
Sbjct: 49 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE------------ 96
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
L + +++ NK D+ A + K + Q
Sbjct: 97 -DELRDAVLLVFANKQDLPNAMNA-----------AEITDKLGLHSLRHRNWYIQ---AT 141
Query: 353 SAKTNSTDVNDAKLKIRSILDLLAEE 378
A + + + LD L+ +
Sbjct: 142 CATSG-DGLYEG-------LDWLSNQ 159
Score = 30.8 bits (68), Expect = 0.29
Identities = 26/206 (12%), Positives = 57/206 (27%), Gaps = 47/206 (22%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
++++ +VG AGK+T L + T P +G K ++
Sbjct: 1 MRIL----MVGLDAAGKTTILYKLKLGE-------IVTTIPTIGFNVETVEYKN-ISFTV 48
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
+ G + + + ++ + + D + R E
Sbjct: 49 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE------------ 96
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
L + +++ NK D+ A + K + Q
Sbjct: 97 -DELRDAVLLVFANKQDLPNAMNA-----------AEITDKLGLHSLRHRNWYIQ---AT 141
Query: 601 SAKTNSTDVNDAKLKIRSILDLLAEE 626
A + + + LD L+ +
Sbjct: 142 CATSG-DGLYEG-------LDWLSNQ 159
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 30.9 bits (69), Expect = 0.34
Identities = 28/191 (14%), Positives = 51/191 (26%), Gaps = 29/191 (15%)
Query: 181 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADLPGLIEGAH 239
L+G +GKST +K + + T D M
Sbjct: 11 LLGAGESGKSTIVKQMRI------LHVVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKW 64
Query: 240 RNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEK 299
+ V + M++ + L+ + + N L
Sbjct: 65 IQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE---ALNLFKSIWNNR------WLRTI 115
Query: 300 PIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNST 359
+IL +NK D+ + + ++D+ ++ PE
Sbjct: 116 SVILFLNKQDLLA-----EKVLAGKSKIEDYFPEFARYTTPEDATPEPG--------EDP 162
Query: 360 DVNDAKLKIRS 370
V AK IR
Sbjct: 163 RVTRAKYFIRD 173
Score = 30.9 bits (69), Expect = 0.34
Identities = 28/191 (14%), Positives = 51/191 (26%), Gaps = 29/191 (15%)
Query: 429 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADLPGLIEGAH 487
L+G +GKST +K + + T D M
Sbjct: 11 LLGAGESGKSTIVKQMRI------LHVVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKW 64
Query: 488 RNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEK 547
+ V + M++ + L+ + + N L
Sbjct: 65 IQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQE---ALNLFKSIWNNR------WLRTI 115
Query: 548 PIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNST 607
+IL +NK D+ + + ++D+ ++ PE
Sbjct: 116 SVILFLNKQDLLA-----EKVLAGKSKIEDYFPEFARYTTPEDATPEPG--------EDP 162
Query: 608 DVNDAKLKIRS 618
V AK IR
Sbjct: 163 RVTRAKYFIRD 173
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 30.6 bits (68), Expect = 0.46
Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 30/198 (15%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ ++G + GKST + + R I + + + + + D
Sbjct: 6 LIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLD----RLKE 61
Query: 239 HRNLGMG-HQFLRHVERTKLIAMIVDVNGFQLGLKHPKR--SCVETVLLL---------- 285
R G+ + E K I+D G + +K+ S + +L+
Sbjct: 62 ERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEA 121
Query: 286 -------NKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEF 338
+E + + +I+ VNKMD+ ++ + + + Y F
Sbjct: 122 GMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSY--GF 179
Query: 339 QPEKVIKFQSILPISAKT 356
KV +P+ A +
Sbjct: 180 NTNKV----RFVPVVAPS 193
Score = 30.6 bits (68), Expect = 0.46
Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 30/198 (15%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ ++G + GKST + + R I + + + + + D
Sbjct: 6 LIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLD----RLKE 61
Query: 487 HRNLGMG-HQFLRHVERTKLIAMIVDVNGFQLGLKHPKR--SCVETVLLL---------- 533
R G+ + E K I+D G + +K+ S + +L+
Sbjct: 62 ERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEA 121
Query: 534 -------NKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEF 586
+E + + +I+ VNKMD+ ++ + + + Y F
Sbjct: 122 GMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSY--GF 179
Query: 587 QPEKVIKFQSILPISAKT 604
KV +P+ A +
Sbjct: 180 NTNKV----RFVPVVAPS 193
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 30.3 bits (67), Expect = 0.51
Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 25/187 (13%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL---- 234
IG+VG + GK+T KA++ + + G+ F + P
Sbjct: 8 IGMVGHVDHGKTTLTKALTGVWTDT-----HSEELRRGITIKIGFADAEIRRCPNCGRYS 62
Query: 235 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLG-----LKHPKRSCVETVLLLNKEL 289
G +F+R V + G + E
Sbjct: 63 TSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTRE 122
Query: 290 ELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 349
L + ++ + I++ I ++ +EF V + I
Sbjct: 123 HLMALQIIGQKNIIIAQNK-----------IELVDKEKALENYRQIKEFIEGTVAENAPI 171
Query: 350 LPISAKT 356
+PISA
Sbjct: 172 IPISALH 178
Score = 30.3 bits (67), Expect = 0.51
Identities = 29/187 (15%), Positives = 53/187 (28%), Gaps = 25/187 (13%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGL---- 482
IG+VG + GK+T KA++ + + G+ F + P
Sbjct: 8 IGMVGHVDHGKTTLTKALTGVWTDT-----HSEELRRGITIKIGFADAEIRRCPNCGRYS 62
Query: 483 IEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLG-----LKHPKRSCVETVLLLNKEL 537
G +F+R V + G + E
Sbjct: 63 TSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTRE 122
Query: 538 ELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 597
L + ++ + I++ I ++ +EF V + I
Sbjct: 123 HLMALQIIGQKNIIIAQNK-----------IELVDKEKALENYRQIKEFIEGTVAENAPI 171
Query: 598 LPISAKT 604
+PISA
Sbjct: 172 IPISALH 178
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 30.0 bits (66), Expect = 0.59
Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 28/204 (13%)
Query: 170 RLELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVA 229
L LK + +VG GK+ L + + P V T D +SV
Sbjct: 7 ALMLKCV----VVGDGAVGKTCLLMSYANDAF-----------PEEYVPTVFDHYAVSVT 51
Query: 230 DLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKEL 289
+ + + F + + + V + +
Sbjct: 52 VGGKQYLLGLYDTAGQEDY-----DRLRPLSYPMTDVFLICFSVVNPASFQNV--KEEWV 104
Query: 290 ELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 349
K P +L+ ++D+ + L+++K+ + + K I
Sbjct: 105 PELKEYAPNVPFLLIGTQIDLRDDPKTL----ARLNDMKEKPICVEQGQKLAKEIGACCY 160
Query: 350 LPISAKTNSTDVNDAKLK-IRSIL 372
+ SA T + + I +IL
Sbjct: 161 VECSALTQ-KGLKTVFDEAIIAIL 183
Score = 30.0 bits (66), Expect = 0.59
Identities = 30/204 (14%), Positives = 60/204 (29%), Gaps = 28/204 (13%)
Query: 418 RLELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVA 477
L LK + +VG GK+ L + + P V T D +SV
Sbjct: 7 ALMLKCV----VVGDGAVGKTCLLMSYANDAF-----------PEEYVPTVFDHYAVSVT 51
Query: 478 DLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKEL 537
+ + + F + + + V + +
Sbjct: 52 VGGKQYLLGLYDTAGQEDY-----DRLRPLSYPMTDVFLICFSVVNPASFQNV--KEEWV 104
Query: 538 ELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 597
K P +L+ ++D+ + L+++K+ + + K I
Sbjct: 105 PELKEYAPNVPFLLIGTQIDLRDDPKTL----ARLNDMKEKPICVEQGQKLAKEIGACCY 160
Query: 598 LPISAKTNSTDVNDAKLK-IRSIL 620
+ SA T + + I +IL
Sbjct: 161 VECSALTQ-KGLKTVFDEAIIAIL 183
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 30.1 bits (66), Expect = 0.61
Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 27/179 (15%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+G+ G + GK+T K ++ + + D S + G
Sbjct: 8 LGIFGHIDHGKTTLSKVLTE----------------IASTSAHDKLPESQKRGITIDIGF 51
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
++ + V+ + + + ++
Sbjct: 52 SAFKLENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFN 111
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 357
PII+++ K D G +EI L+ + +K SI+PISAKT
Sbjct: 112 IPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHN-----------LKNSSIIPISAKTG 159
Score = 30.1 bits (66), Expect = 0.61
Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 27/179 (15%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+G+ G + GK+T K ++ + + D S + G
Sbjct: 8 LGIFGHIDHGKTTLSKVLTE----------------IASTSAHDKLPESQKRGITIDIGF 51
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
++ + V+ + + + ++
Sbjct: 52 SAFKLENYRITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFN 111
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTN 605
PII+++ K D G +EI L+ + +K SI+PISAKT
Sbjct: 112 IPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHN-----------LKNSSIIPISAKTG 159
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 29.7 bits (65), Expect = 0.61
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
+K++ +VG GKS+ ++ + + I +D +
Sbjct: 3 IKMV----VVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVR---LML 55
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQ 268
G + + R + L+ D F+
Sbjct: 56 WDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFE 91
Score = 29.7 bits (65), Expect = 0.61
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
+K++ +VG GKS+ ++ + + I +D +
Sbjct: 3 IKMV----VVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVR---LML 55
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQ 516
G + + R + L+ D F+
Sbjct: 56 WDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFE 91
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 30.0 bits (66), Expect = 0.65
Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 48/204 (23%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E K+I +VG NAGK+T L S + + ++ + +
Sbjct: 15 EHKVI----IVGLDNAGKTTILYQFSMNEV-----------VHTSPTIGSNVEEIVINNT 59
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
L+ + + + T+ + ++VD + + L
Sbjct: 60 RFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELY----------KML 109
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIR-DTLHNLKDHIHKYPEEFQPEKVIKFQSIL 350
+L + +++ NK DV+ + + + L ++KDH
Sbjct: 110 AHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHI---------------Q 154
Query: 351 PISAKTNSTDVNDA------KLKI 368
A T + +LKI
Sbjct: 155 ACCALTG-EGLCQGLEWMMSRLKI 177
Score = 30.0 bits (66), Expect = 0.65
Identities = 31/204 (15%), Positives = 63/204 (30%), Gaps = 48/204 (23%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E K+I +VG NAGK+T L S + + ++ + +
Sbjct: 15 EHKVI----IVGLDNAGKTTILYQFSMNEV-----------VHTSPTIGSNVEEIVINNT 59
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
L+ + + + T+ + ++VD + + L
Sbjct: 60 RFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELY----------KML 109
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIR-DTLHNLKDHIHKYPEEFQPEKVIKFQSIL 598
+L + +++ NK DV+ + + + L ++KDH
Sbjct: 110 AHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHI---------------Q 154
Query: 599 PISAKTNSTDVNDA------KLKI 616
A T + +LKI
Sbjct: 155 ACCALTG-EGLCQGLEWMMSRLKI 177
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.5 bits (65), Expect = 0.73
Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 35/184 (19%)
Query: 181 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGAHR 240
++G GKS L + + ++ +I + G R
Sbjct: 9 IIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA---GQER 65
Query: 241 NLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEKP 300
+ + R ++ I + + +
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD--------------ARNLTNPNTV 111
Query: 301 IILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTD 360
IIL+ NK D+E +D ++ ++F E + F L SAKT +
Sbjct: 112 IILIGNKADLE--------------AQRDVTYEEAKQFAEENGLLF---LEASAKTG-EN 153
Query: 361 VNDA 364
V DA
Sbjct: 154 VEDA 157
Score = 29.5 bits (65), Expect = 0.73
Identities = 29/184 (15%), Positives = 53/184 (28%), Gaps = 35/184 (19%)
Query: 429 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGAHR 488
++G GKS L + + ++ +I + G R
Sbjct: 9 IIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA---GQER 65
Query: 489 NLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEKP 548
+ + R ++ I + + +
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD--------------ARNLTNPNTV 111
Query: 549 IILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTD 608
IIL+ NK D+E +D ++ ++F E + F L SAKT +
Sbjct: 112 IILIGNKADLE--------------AQRDVTYEEAKQFAEENGLLF---LEASAKTG-EN 153
Query: 609 VNDA 612
V DA
Sbjct: 154 VEDA 157
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 30.1 bits (67), Expect = 0.78
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
G++G AGK+TF++ I+ P+ G + FDD ++ ++ ++
Sbjct: 34 FGILGPSGAGKTTFMRIIAGL-----------DVPSTGELYFDD--RLVASNGKLIVPPE 80
Query: 239 HRNLGMGHQF 248
R +GM Q
Sbjct: 81 DRKIGMVFQT 90
Score = 30.1 bits (67), Expect = 0.78
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
G++G AGK+TF++ I+ P+ G + FDD ++ ++ ++
Sbjct: 34 FGILGPSGAGKTTFMRIIAGL-----------DVPSTGELYFDD--RLVASNGKLIVPPE 80
Query: 487 HRNLGMGHQF 496
R +GM Q
Sbjct: 81 DRKIGMVFQT 90
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 30.0 bits (67), Expect = 0.82
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 18/70 (25%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
L+G AGKS FL+ I+ +KP+ G + + + LP
Sbjct: 27 CVLLGPTGAGKSVFLELIAG-----------IVKPDRGEVRLNG---ADITPLP----PE 68
Query: 239 HRNLGMGHQF 248
R +G Q
Sbjct: 69 RRGIGFVPQD 78
Score = 30.0 bits (67), Expect = 0.82
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 18/70 (25%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
L+G AGKS FL+ I+ +KP+ G + + + LP
Sbjct: 27 CVLLGPTGAGKSVFLELIAG-----------IVKPDRGEVRLNG---ADITPLP----PE 68
Query: 487 HRNLGMGHQF 496
R +G Q
Sbjct: 69 RRGIGFVPQD 78
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 29.5 bits (65), Expect = 0.83
Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 42/203 (20%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD-DFRKMSVADL 231
K + ++G GKS L + K S ++ +I + K+ + D
Sbjct: 6 FKFL----VIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 61
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G R R A++V + L L
Sbjct: 62 AGQER--------FRSVTRSYYRGAAGALLVYDITSRETYNA-----------LTNWLTD 102
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 351
+M + +I+L G + L ++ F E + F L
Sbjct: 103 ARMLASQNIVIILC-------------GNKKDLDADREVTFLEASRFAQENELMF---LE 146
Query: 352 ISAKTNSTDVNDAKLKI-RSILD 373
SA T +V +A ++ R IL+
Sbjct: 147 TSALTG-ENVEEAFVQCARKILN 168
Score = 29.5 bits (65), Expect = 0.83
Identities = 35/203 (17%), Positives = 61/203 (30%), Gaps = 42/203 (20%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD-DFRKMSVADL 479
K + ++G GKS L + K S ++ +I + K+ + D
Sbjct: 6 FKFL----VIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 61
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G R R A++V + L L
Sbjct: 62 AGQER--------FRSVTRSYYRGAAGALLVYDITSRETYNA-----------LTNWLTD 102
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILP 599
+M + +I+L G + L ++ F E + F L
Sbjct: 103 ARMLASQNIVIILC-------------GNKKDLDADREVTFLEASRFAQENELMF---LE 146
Query: 600 ISAKTNSTDVNDAKLKI-RSILD 621
SA T +V +A ++ R IL+
Sbjct: 147 TSALTG-ENVEEAFVQCARKILN 168
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 29.5 bits (65), Expect = 0.87
Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 42/194 (21%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E++++ ++G AGK+T L K+ T P VG K ++
Sbjct: 12 EMRIL----MLGLDAAGKTTILY-------KLKLGQSVTTIPTVGFNVETVTYKNVKFNV 60
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
+ G +R + R + + + + + + E+
Sbjct: 61 WDV---------GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREM 111
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDT-LHNLKDHIHKYPEEFQPEKVIKFQSIL 350
I++ NK D+ A + ++ L ++D
Sbjct: 112 RDAI-----ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYV---------------Q 151
Query: 351 PISAKTNSTDVNDA 364
P A + + +
Sbjct: 152 PSCATSG-DGLYEG 164
Score = 29.5 bits (65), Expect = 0.87
Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 42/194 (21%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E++++ ++G AGK+T L K+ T P VG K ++
Sbjct: 12 EMRIL----MLGLDAAGKTTILY-------KLKLGQSVTTIPTVGFNVETVTYKNVKFNV 60
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
+ G +R + R + + + + + + E+
Sbjct: 61 WDV---------GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREM 111
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDT-LHNLKDHIHKYPEEFQPEKVIKFQSIL 598
I++ NK D+ A + ++ L ++D
Sbjct: 112 RDAI-----ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYV---------------Q 151
Query: 599 PISAKTNSTDVNDA 612
P A + + +
Sbjct: 152 PSCATSG-DGLYEG 164
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 29.7 bits (66), Expect = 0.95
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF 223
I + G GKST + + + V +IT D F
Sbjct: 83 ISIAGSVAVGKSTTARVLQALLSRWPE------HRRVELITTDGF 121
Score = 29.7 bits (66), Expect = 0.95
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF 471
I + G GKST + + + V +IT D F
Sbjct: 83 ISIAGSVAVGKSTTARVLQALLSRWPE------HRRVELITTDGF 121
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 29.5 bits (65), Expect = 0.96
Identities = 23/196 (11%), Positives = 57/196 (29%), Gaps = 19/196 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPF--TTIKPNVGVITFDDFRKMSVADLPGLIE 236
I + G GKST LK + P + TT P G + D+ +SV + +I+
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 63
Query: 237 GAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 296
+ + + + + + +
Sbjct: 64 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVK-----------SVKAIPE 112
Query: 297 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 356
L + + + + + +T ++ + E + ++
Sbjct: 113 LNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVI-----V 167
Query: 357 NSTDVNDAKLKIRSIL 372
N D++ A +++ +
Sbjct: 168 ND-DLDKAYKELKDFI 182
Score = 29.5 bits (65), Expect = 0.96
Identities = 23/196 (11%), Positives = 57/196 (29%), Gaps = 19/196 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPF--TTIKPNVGVITFDDFRKMSVADLPGLIE 484
I + G GKST LK + P + TT P G + D+ +SV + +I+
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 63
Query: 485 GAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNL 544
+ + + + + + +
Sbjct: 64 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVK-----------SVKAIPE 112
Query: 545 LEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKT 604
L + + + + + +T ++ + E + ++
Sbjct: 113 LNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVI-----V 167
Query: 605 NSTDVNDAKLKIRSIL 620
N D++ A +++ +
Sbjct: 168 ND-DLDKAYKELKDFI 182
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 29.3 bits (64), Expect = 0.99
Identities = 27/208 (12%), Positives = 53/208 (25%), Gaps = 36/208 (17%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 232
LK+I ++G GK++ + + K +G + +
Sbjct: 3 LKVI----ILGDSGVGKTSLMNQYVNKKFS------NQYKATIGADFLTKEVMVDDRLVT 52
Query: 233 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 292
I + ++ DV
Sbjct: 53 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDV---------------------TAPNTFK 91
Query: 293 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 352
++ ++ + D E + G + L N + + + I +
Sbjct: 92 TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPY---FET 148
Query: 353 SAKTNSTDVNDAKLKI-RSILDLLAEEE 379
SAK +V A I R+ L E E
Sbjct: 149 SAKEA-INVEQAFQTIARNALKQETEVE 175
Score = 29.3 bits (64), Expect = 0.99
Identities = 27/208 (12%), Positives = 53/208 (25%), Gaps = 36/208 (17%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLP 480
LK+I ++G GK++ + + K +G + +
Sbjct: 3 LKVI----ILGDSGVGKTSLMNQYVNKKFS------NQYKATIGADFLTKEVMVDDRLVT 52
Query: 481 GLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELY 540
I + ++ DV
Sbjct: 53 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDV---------------------TAPNTFK 91
Query: 541 KMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPI 600
++ ++ + D E + G + L N + + + I +
Sbjct: 92 TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPY---FET 148
Query: 601 SAKTNSTDVNDAKLKI-RSILDLLAEEE 627
SAK +V A I R+ L E E
Sbjct: 149 SAKEA-INVEQAFQTIARNALKQETEVE 175
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 29.6 bits (66), Expect = 1.00
Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 34/163 (20%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD-------- 230
GL+G AGK+T L+ IS IKP+ G++T +
Sbjct: 31 FGLIGPNGAGKTTTLRIISTL-----------IKPSSGIVTVFGKNVVEEPHEVRKLISY 79
Query: 231 -------LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVL 283
+ + G E +++ + GL + V T
Sbjct: 80 LPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATE----IAGLGEKIKDRVSTYS 135
Query: 284 LLNKE-LELYKMNLLEKPIILL---VNKMDVEGAQEIYDGIRD 322
L + + ++ + +L + +DV A+E+ ++
Sbjct: 136 KGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQ 178
Score = 29.6 bits (66), Expect = 1.00
Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 34/163 (20%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD-------- 478
GL+G AGK+T L+ IS IKP+ G++T +
Sbjct: 31 FGLIGPNGAGKTTTLRIISTL-----------IKPSSGIVTVFGKNVVEEPHEVRKLISY 79
Query: 479 -------LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVL 531
+ + G E +++ + GL + V T
Sbjct: 80 LPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATE----IAGLGEKIKDRVSTYS 135
Query: 532 LLNKE-LELYKMNLLEKPIILL---VNKMDVEGAQEIYDGIRD 570
L + + ++ + +L + +DV A+E+ ++
Sbjct: 136 KGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQ 178
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 29.4 bits (66), Expect = 1.0
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 24/106 (22%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I ++G +GKSTFL+ I+ KP+ G I + V D G ++ A
Sbjct: 31 ISIIGSSGSGKSTFLRCINFL-----------EKPSEGAIIVNGQNINLVRDKDGQLKVA 79
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLL 284
+N + + M+ FQ + +E V+
Sbjct: 80 DKN--------QLRLLRTRLTMV-----FQHFNLWSHMTVLENVME 112
Score = 29.4 bits (66), Expect = 1.0
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 24/106 (22%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I ++G +GKSTFL+ I+ KP+ G I + V D G ++ A
Sbjct: 31 ISIIGSSGSGKSTFLRCINFL-----------EKPSEGAIIVNGQNINLVRDKDGQLKVA 79
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLL 532
+N + + M+ FQ + +E V+
Sbjct: 80 DKN--------QLRLLRTRLTMV-----FQHFNLWSHMTVLENVME 112
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 29.7 bits (66), Expect = 1.0
Identities = 23/193 (11%), Positives = 63/193 (32%), Gaps = 33/193 (17%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF------RK 225
++ + ++ ++ + GKST ++ + I+ G F D R
Sbjct: 13 KVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIIS-------AAKAGEARFTDTRKDEQERG 65
Query: 226 MSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKR--------- 276
+++ + + + + + LI ++D G
Sbjct: 66 ITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLIN-LIDSPGHVDFSSEVTAALRVTDGAL 124
Query: 277 ---SCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGA------QEIYDGIRDTLHNL 327
+E V + + + L + ++++NK+D +++Y T+ ++
Sbjct: 125 VVVDTIEGVCVQTETV-LRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESV 183
Query: 328 KDHIHKYPEEFQP 340
+ Y +E
Sbjct: 184 NVIVSTYADEVLG 196
Score = 29.7 bits (66), Expect = 1.0
Identities = 23/193 (11%), Positives = 63/193 (32%), Gaps = 33/193 (17%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF------RK 473
++ + ++ ++ + GKST ++ + I+ G F D R
Sbjct: 13 KVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIIS-------AAKAGEARFTDTRKDEQERG 65
Query: 474 MSVADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKR--------- 524
+++ + + + + + LI ++D G
Sbjct: 66 ITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLIN-LIDSPGHVDFSSEVTAALRVTDGAL 124
Query: 525 ---SCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGA------QEIYDGIRDTLHNL 575
+E V + + + L + ++++NK+D +++Y T+ ++
Sbjct: 125 VVVDTIEGVCVQTETV-LRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESV 183
Query: 576 KDHIHKYPEEFQP 588
+ Y +E
Sbjct: 184 NVIVSTYADEVLG 196
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 29.0 bits (64), Expect = 1.2
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 231
KL+ L+G GK+ L S I + I D R K+ + D
Sbjct: 7 FKLL----LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 62
Query: 232 PG 233
G
Sbjct: 63 AG 64
Score = 29.0 bits (64), Expect = 1.2
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 5/62 (8%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 479
KL+ L+G GK+ L S I + I D R K+ + D
Sbjct: 7 FKLL----LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 62
Query: 480 PG 481
G
Sbjct: 63 AG 64
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 29.5 bits (66), Expect = 1.2
Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 24/159 (15%)
Query: 179 IGLVGFPN-AGKSTFLKAISRARP----------KIASYPFTTIKPNVGVITFDDFRKMS 227
+ LVG PN AGKST L ++ + ++ T + + ++ +
Sbjct: 28 LHLVG-PNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFA 86
Query: 228 VADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNK 287
L H++ + L V + + + QL +R + V+L
Sbjct: 87 TPVWHYLTL--HQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVL--- 141
Query: 288 ELELYKMNLLEKPIILLVN----KMDVEGAQEIYDGIRD 322
+LL++ +DV + +
Sbjct: 142 ---QITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSA 177
Score = 29.5 bits (66), Expect = 1.2
Identities = 25/159 (15%), Positives = 51/159 (32%), Gaps = 24/159 (15%)
Query: 427 IGLVGFPN-AGKSTFLKAISRARP----------KIASYPFTTIKPNVGVITFDDFRKMS 475
+ LVG PN AGKST L ++ + ++ T + + ++ +
Sbjct: 28 LHLVG-PNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFA 86
Query: 476 VADLPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNK 535
L H++ + L V + + + QL +R + V+L
Sbjct: 87 TPVWHYLTL--HQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVL--- 141
Query: 536 ELELYKMNLLEKPIILLVN----KMDVEGAQEIYDGIRD 570
+LL++ +DV + +
Sbjct: 142 ---QITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSA 177
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 29.1 bits (64), Expect = 1.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKI--ASYPFTTIKPNVG 216
+ L G AGKST LK + + I S TT P G
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPG 42
Score = 29.1 bits (64), Expect = 1.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKI--ASYPFTTIKPNVG 464
+ L G AGKST LK + + I S TT P G
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPG 42
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 29.1 bits (65), Expect = 1.4
Identities = 12/71 (16%), Positives = 20/71 (28%), Gaps = 8/71 (11%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I + G AG ST + F I D F + + AD+ ++
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQI--------FRREGVKAVSIEGDAFHRFNRADMKAELDRR 58
Query: 239 HRNLGMGHQFL 249
+
Sbjct: 59 YAAGDATFSHF 69
Score = 29.1 bits (65), Expect = 1.4
Identities = 12/71 (16%), Positives = 20/71 (28%), Gaps = 8/71 (11%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I + G AG ST + F I D F + + AD+ ++
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQI--------FRREGVKAVSIEGDAFHRFNRADMKAELDRR 58
Query: 487 HRNLGMGHQFL 497
+
Sbjct: 59 YAAGDATFSHF 69
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 28.8 bits (63), Expect = 1.6
Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 30/194 (15%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ G GKST K ++ N I D M V E
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQL------------DNSAYIEGDIINHMVVGGYRPPWESD 52
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
L V ++ + +TV ++E+ + L
Sbjct: 53 ELLALTWKNITDLTVNFLLAQNDVVLDYI--AFPDEAEALAQTVQAKVDDVEIRFIILWT 110
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 358
LL D +R + + + EEF+ + + + T+
Sbjct: 111 NREELLRR-----------DALRKKDEQMGERCLELVEEFESKGIDERYFY-----NTSH 154
Query: 359 TDVNDAKLKIRSIL 372
+ ++++
Sbjct: 155 LQPTNLNDIVKNLK 168
Score = 28.8 bits (63), Expect = 1.6
Identities = 26/194 (13%), Positives = 51/194 (26%), Gaps = 30/194 (15%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ G GKST K ++ N I D M V E
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQL------------DNSAYIEGDIINHMVVGGYRPPWESD 52
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
L V ++ + +TV ++E+ + L
Sbjct: 53 ELLALTWKNITDLTVNFLLAQNDVVLDYI--AFPDEAEALAQTVQAKVDDVEIRFIILWT 110
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNS 606
LL D +R + + + EEF+ + + + T+
Sbjct: 111 NREELLRR-----------DALRKKDEQMGERCLELVEEFESKGIDERYFY-----NTSH 154
Query: 607 TDVNDAKLKIRSIL 620
+ ++++
Sbjct: 155 LQPTNLNDIVKNLK 168
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 28.3 bits (62), Expect = 1.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
I +GF +GKST +A+++
Sbjct: 3 IVFIGFMGSGKSTLARALAKD 23
Score = 28.3 bits (62), Expect = 1.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
I +GF +GKST +A+++
Sbjct: 3 IVFIGFMGSGKSTLARALAKD 23
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 28.8 bits (63), Expect = 1.8
Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 21/178 (11%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
E+KL+ L+G +GKST +K ++ F
Sbjct: 2 EVKLL----LLGAGESGKSTIVK-------QMKIIHEAGTGIV--ETHFTFKDLHFKMFD 48
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G G V + D + E++ L +
Sbjct: 49 VG---GQRSERKKWIHCFEGVTAIIFCVALSDYDLVLA-EDEEMNRMHESMKLFDSICNN 104
Query: 292 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 349
+ IIL +NK D+ + + + EE +F+ +
Sbjct: 105 KWFT--DTSIILFLNKKDLFEEKIKKSPLTICYP--EYAGSNTYEEAAAYIQCQFEDL 158
Score = 28.8 bits (63), Expect = 1.8
Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 21/178 (11%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
E+KL+ L+G +GKST +K ++ F
Sbjct: 2 EVKLL----LLGAGESGKSTIVK-------QMKIIHEAGTGIV--ETHFTFKDLHFKMFD 48
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G G V + D + E++ L +
Sbjct: 49 VG---GQRSERKKWIHCFEGVTAIIFCVALSDYDLVLA-EDEEMNRMHESMKLFDSICNN 104
Query: 540 YKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSI 597
+ IIL +NK D+ + + + EE +F+ +
Sbjct: 105 KWFT--DTSIILFLNKKDLFEEKIKKSPLTICYP--EYAGSNTYEEAAAYIQCQFEDL 158
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 28.7 bits (64), Expect = 1.8
Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 41/173 (23%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
IG+VG +GKST K I R P G + D +A
Sbjct: 32 IGIVGRSGSGKSTLTKLIQR-----------FYIPENGQVLIDG---HDLALAD--PNWL 75
Query: 239 HRNLGMGHQFLRHVERTKL--IAMIVDVNGFQLGLKHPKRSCV-ETVLLLNKELELY--- 292
R +G+ Q + R+ + I++ + + K + + + L +
Sbjct: 76 RRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGE 135
Query: 293 ----------------KMNLLEKPIILL---VNKMDVEGAQEIYDGIRDTLHN 326
+ + I++ + +D E I +
Sbjct: 136 QGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKG 188
Score = 28.7 bits (64), Expect = 1.8
Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 41/173 (23%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
IG+VG +GKST K I R P G + D +A
Sbjct: 32 IGIVGRSGSGKSTLTKLIQR-----------FYIPENGQVLIDG---HDLALAD--PNWL 75
Query: 487 HRNLGMGHQFLRHVERTKL--IAMIVDVNGFQLGLKHPKRSCV-ETVLLLNKELELY--- 540
R +G+ Q + R+ + I++ + + K + + + L +
Sbjct: 76 RRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGE 135
Query: 541 ----------------KMNLLEKPIILL---VNKMDVEGAQEIYDGIRDTLHN 574
+ + I++ + +D E I +
Sbjct: 136 QGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKG 188
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 28.7 bits (64), Expect = 2.0
Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 13/59 (22%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF--RKMSVADLPGLI 235
I G GKST + R +P G IT D +S+ + I
Sbjct: 31 IAFAGPSGGGKSTIFSLLER-----------FYQPTAGEITIDGQPIDNISLENWRSQI 78
Score = 28.7 bits (64), Expect = 2.0
Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 13/59 (22%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF--RKMSVADLPGLI 483
I G GKST + R +P G IT D +S+ + I
Sbjct: 31 IAFAGPSGGGKSTIFSLLER-----------FYQPTAGEITIDGQPIDNISLENWRSQI 78
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 28.3 bits (62), Expect = 2.0
Identities = 33/193 (17%), Positives = 58/193 (30%), Gaps = 36/193 (18%)
Query: 181 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGAHR 240
++G GKS L + R + TI G + K + G
Sbjct: 8 IIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGK-QIKLQIWDTAGQES 64
Query: 241 NLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEKP 300
+ + R L+ I F + + + +
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLE--------------DARQHSSSNMV 110
Query: 301 IILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTD 360
I+L+ NK D+E + +D + E F E + F + SAKT +
Sbjct: 111 IMLIGNKSDLE--------------SRRDVKREEGEAFAREHGLIF---METSAKTA-CN 152
Query: 361 VNDAKLKI-RSIL 372
V +A + + I
Sbjct: 153 VEEAFINTAKEIY 165
Score = 28.3 bits (62), Expect = 2.0
Identities = 33/193 (17%), Positives = 58/193 (30%), Gaps = 36/193 (18%)
Query: 429 LVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGAHR 488
++G GKS L + R + TI G + K + G
Sbjct: 8 IIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGK-QIKLQIWDTAGQES 64
Query: 489 NLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLEKP 548
+ + R L+ I F + + + +
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLE--------------DARQHSSSNMV 110
Query: 549 IILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTD 608
I+L+ NK D+E + +D + E F E + F + SAKT +
Sbjct: 111 IMLIGNKSDLE--------------SRRDVKREEGEAFAREHGLIF---METSAKTA-CN 152
Query: 609 VNDAKLKI-RSIL 620
V +A + + I
Sbjct: 153 VEEAFINTAKEIY 165
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.0 bits (61), Expect = 2.1
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKM 226
LVG P +GKST + ++ K + T +
Sbjct: 4 AVLVGLPGSGKSTIGRRLA----KALGVGLLDTDVAIEQRTGRSIADI 47
Score = 28.0 bits (61), Expect = 2.1
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKM 474
LVG P +GKST + ++ K + T +
Sbjct: 4 AVLVGLPGSGKSTIGRRLA----KALGVGLLDTDVAIEQRTGRSIADI 47
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 28.4 bits (62), Expect = 2.1
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
I +VG G +T + ++RA
Sbjct: 5 IFMVGARGCGMTTVGRELARA 25
Score = 28.4 bits (62), Expect = 2.1
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
I +VG G +T + ++RA
Sbjct: 5 IFMVGARGCGMTTVGRELARA 25
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 28.7 bits (64), Expect = 2.1
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 19/154 (12%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD---FRKMSVADLPGLI 235
+ + G +GK++ L I ++ + G+I F +PG I
Sbjct: 65 LAITGSTGSGKTSLLMLILG-----------ELEASEGIIKHSGRVSFCSQFSWIMPGTI 113
Query: 236 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 295
+ G+ + R+ K + D+ F T+ +
Sbjct: 114 KENII-FGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARA 172
Query: 296 LLEKPIILLV----NKMDVEGAQEIYDGIRDTLH 325
+ + + L+ +DV +++++ L
Sbjct: 173 VYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLM 206
Score = 28.7 bits (64), Expect = 2.1
Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 19/154 (12%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD---FRKMSVADLPGLI 483
+ + G +GK++ L I ++ + G+I F +PG I
Sbjct: 65 LAITGSTGSGKTSLLMLILG-----------ELEASEGIIKHSGRVSFCSQFSWIMPGTI 113
Query: 484 EGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMN 543
+ G+ + R+ K + D+ F T+ +
Sbjct: 114 KENII-FGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARA 172
Query: 544 LLEKPIILLV----NKMDVEGAQEIYDGIRDTLH 573
+ + + L+ +DV +++++ L
Sbjct: 173 VYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLM 206
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 28.4 bits (62), Expect = 2.1
Identities = 23/205 (11%), Positives = 53/205 (25%), Gaps = 29/205 (14%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
IG+ G +GKST + V+ D + +
Sbjct: 6 IGITGNIGSGKSTVAALLR--------------SWGYPVLDLDALAARARENKEE----- 46
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+ + +A +V + +L LL+ + L +
Sbjct: 47 ELKRLFPEAVVGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFL 106
Query: 299 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK--- 355
+ +L + + + + + Q +P K
Sbjct: 107 EIPLLFEKGWEGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQ--MPEEEKRKR 164
Query: 356 -----TNSTDVNDAKLKIRSILDLL 375
N+ + D + ++++L L
Sbjct: 165 ATWVLENTGSLEDLERALKAVLAEL 189
Score = 28.4 bits (62), Expect = 2.1
Identities = 23/205 (11%), Positives = 53/205 (25%), Gaps = 29/205 (14%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
IG+ G +GKST + V+ D + +
Sbjct: 6 IGITGNIGSGKSTVAALLR--------------SWGYPVLDLDALAARARENKEE----- 46
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+ + +A +V + +L LL+ + L +
Sbjct: 47 ELKRLFPEAVVGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFL 106
Query: 547 KPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSILPISAK--- 603
+ +L + + + + + Q +P K
Sbjct: 107 EIPLLFEKGWEGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQ--MPEEEKRKR 164
Query: 604 -----TNSTDVNDAKLKIRSILDLL 623
N+ + D + ++++L L
Sbjct: 165 ATWVLENTGSLEDLERALKAVLAEL 189
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 28.6 bits (63), Expect = 2.3
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF 223
I G +GKS I + Y + ++G + DDF
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNH--LMEKYGG---EKSIGYASIDDF 69
Score = 28.6 bits (63), Expect = 2.3
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDF 471
I G +GKS I + Y + ++G + DDF
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNH--LMEKYGG---EKSIGYASIDDF 69
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.8 bits (60), Expect = 2.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
I LVG AGKST + +++
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQ 25
Score = 27.8 bits (60), Expect = 2.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
I LVG AGKST + +++
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQ 25
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.8 bits (60), Expect = 3.2
Identities = 8/44 (18%), Positives = 13/44 (29%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD 222
+ L+G GKST + + S + D
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVD 49
Score = 27.8 bits (60), Expect = 3.2
Identities = 8/44 (18%), Positives = 13/44 (29%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD 470
+ L+G GKST + + S + D
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVD 49
>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId:
5661]}
Length = 236
Score = 27.8 bits (61), Expect = 3.5
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 9/57 (15%)
Query: 326 NLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQEM 382
LK Y F P V +F + I + +++I D L + + M
Sbjct: 21 LLKKSYRWYSPVFSPRNVPRFADVSSI--------TESPET-LKAIRDFLVQRYRAM 68
Score = 27.8 bits (61), Expect = 3.5
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 9/57 (15%)
Query: 574 NLKDHIHKYPEEFQPEKVIKFQSILPISAKTNSTDVNDAKLKIRSILDLLAEEEQEM 630
LK Y F P V +F + I + +++I D L + + M
Sbjct: 21 LLKKSYRWYSPVFSPRNVPRFADVSSI--------TESPET-LKAIRDFLVQRYRAM 68
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.5 bits (60), Expect = 3.6
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 231
K++ ++G + GK++FL + A I V I +D R K+ + D
Sbjct: 6 FKIL----IIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 61
Query: 232 PG 233
G
Sbjct: 62 AG 63
Score = 27.5 bits (60), Expect = 3.6
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 479
K++ ++G + GK++FL + A I V I +D R K+ + D
Sbjct: 6 FKIL----IIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 61
Query: 480 PG 481
G
Sbjct: 62 AG 63
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 27.7 bits (60), Expect = 3.7
Identities = 38/203 (18%), Positives = 63/203 (31%), Gaps = 28/203 (13%)
Query: 171 LELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD 230
+ KL+ +VG GK+ L S+ + P T+ N D +++ +
Sbjct: 1 IRKKLV----IVGDGACGKTCLLIVNSKDQFPEVYVP--TVFENYVADIEVDGKQVEL-- 52
Query: 231 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 290
G + + V + F + + E K
Sbjct: 53 --------ALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE------KWTP 98
Query: 291 LYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSIL 350
K PIIL+ NK D+ + R L +K K E I +
Sbjct: 99 EVKHFCPNVPIILVGNKKDLRND----EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYM 154
Query: 351 PISAKTNSTDVNDA-KLKIRSIL 372
SAKT V + ++ R+ L
Sbjct: 155 ECSAKTK-DGVREVFEMATRAAL 176
Score = 27.7 bits (60), Expect = 3.7
Identities = 38/203 (18%), Positives = 63/203 (31%), Gaps = 28/203 (13%)
Query: 419 LELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVAD 478
+ KL+ +VG GK+ L S+ + P T+ N D +++ +
Sbjct: 1 IRKKLV----IVGDGACGKTCLLIVNSKDQFPEVYVP--TVFENYVADIEVDGKQVEL-- 52
Query: 479 LPGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELE 538
G + + V + F + + E K
Sbjct: 53 --------ALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE------KWTP 98
Query: 539 LYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYPEEFQPEKVIKFQSIL 598
K PIIL+ NK D+ + R L +K K E I +
Sbjct: 99 EVKHFCPNVPIILVGNKKDLRND----EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYM 154
Query: 599 PISAKTNSTDVNDA-KLKIRSIL 620
SAKT V + ++ R+ L
Sbjct: 155 ECSAKTK-DGVREVFEMATRAAL 176
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.4 bits (59), Expect = 3.7
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKI 203
I +G P +GKST+ + P
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGF 29
Score = 27.4 bits (59), Expect = 3.7
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKI 451
I +G P +GKST+ + P
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGF 29
>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM
{Methylobacillus flagellatus [TaxId: 405]}
Length = 395
Score = 28.0 bits (62), Expect = 4.0
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 295 NLLEKPIILLVNKMDVEGAQ-EIYDGIRDTLHNLKDHI-----HKYPEEFQPEKVIK 345
++++ + KMD+EG++ G R + K + H+ + I
Sbjct: 316 DIIDDAPTFI--KMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYIL 370
Score = 28.0 bits (62), Expect = 4.0
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 543 NLLEKPIILLVNKMDVEGAQ-EIYDGIRDTLHNLKDHI-----HKYPEEFQPEKVIK 593
++++ + KMD+EG++ G R + K + H+ + I
Sbjct: 316 DIIDDAPTFI--KMDIEGSELSALKGARRAISEHKPKLAISAYHRSTDLLDLTNYIL 370
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 27.6 bits (60), Expect = 4.1
Identities = 7/75 (9%), Positives = 18/75 (24%), Gaps = 8/75 (10%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ + G P G +T + N +++F + + +
Sbjct: 4 VVVTGVPGVGSTTSSQLAMDN--------LRKEGVNYKMVSFGSVMFEVAKEENLVSDRD 55
Query: 239 HRNLGMGHQFLRHVE 253
R +
Sbjct: 56 QMRKMDPETQKRIQK 70
Score = 27.6 bits (60), Expect = 4.1
Identities = 7/75 (9%), Positives = 18/75 (24%), Gaps = 8/75 (10%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ + G P G +T + N +++F + + +
Sbjct: 4 VVVTGVPGVGSTTSSQLAMDN--------LRKEGVNYKMVSFGSVMFEVAKEENLVSDRD 55
Query: 487 HRNLGMGHQFLRHVE 501
R +
Sbjct: 56 QMRKMDPETQKRIQK 70
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 27.2 bits (59), Expect = 4.7
Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 43/205 (20%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGV--ITFDDFRKMSVA 229
ELKL+ L+G +GKSTF+K ++ + + P G+ FD +
Sbjct: 2 ELKLL----LLGTGESGKSTFIK-------QMRIIHGSGV-PTTGIIEYPFDLQSVIFRM 49
Query: 230 DLPGLIE--------------GAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPK 275
G + + VE M F+ + +P
Sbjct: 50 VDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPW 109
Query: 276 RSCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYP 335
+L LN K L EK + + YDG + ++ I K
Sbjct: 110 FQNSSVILFLN-----KKDLLEEK-----IMYSHLVDYFPEYDGPQRDAQAAREFILKMF 159
Query: 336 EEF--QPEKVIKFQSILPISAKTNS 358
+ +K+I A
Sbjct: 160 VDLNPDSDKIIYSH---FTCATDTE 181
Score = 27.2 bits (59), Expect = 4.7
Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 43/205 (20%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGV--ITFDDFRKMSVA 477
ELKL+ L+G +GKSTF+K ++ + + P G+ FD +
Sbjct: 2 ELKLL----LLGTGESGKSTFIK-------QMRIIHGSGV-PTTGIIEYPFDLQSVIFRM 49
Query: 478 DLPGLIE--------------GAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPK 523
G + + VE M F+ + +P
Sbjct: 50 VDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPW 109
Query: 524 RSCVETVLLLNKELELYKMNLLEKPIILLVNKMDVEGAQEIYDGIRDTLHNLKDHIHKYP 583
+L LN K L EK + + YDG + ++ I K
Sbjct: 110 FQNSSVILFLN-----KKDLLEEK-----IMYSHLVDYFPEYDGPQRDAQAAREFILKMF 159
Query: 584 EEF--QPEKVIKFQSILPISAKTNS 606
+ +K+I A
Sbjct: 160 VDLNPDSDKIIYSH---FTCATDTE 181
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 4.8
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
++G +GKS+ L AI
Sbjct: 26 NLIIGQNGSGKSSLLDAILVG 46
Score = 27.8 bits (60), Expect = 4.8
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
++G +GKS+ L AI
Sbjct: 26 NLIIGQNGSGKSSLLDAILVG 46
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 27.5 bits (61), Expect = 4.9
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 12/122 (9%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ ++G +GKST L I KP G + D+ K + D L +
Sbjct: 34 VSIMGPSGSGKSTMLNIIGC-----------LDKPTEGEVYIDN-IKTNDLDDDELTKIR 81
Query: 239 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 298
+G Q + + + F+ + L K EL +
Sbjct: 82 RDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANH 141
Query: 299 KP 300
KP
Sbjct: 142 KP 143
Score = 27.5 bits (61), Expect = 4.9
Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 12/122 (9%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ ++G +GKST L I KP G + D+ K + D L +
Sbjct: 34 VSIMGPSGSGKSTMLNIIGC-----------LDKPTEGEVYIDN-IKTNDLDDDELTKIR 81
Query: 487 HRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELELYKMNLLE 546
+G Q + + + F+ + L K EL +
Sbjct: 82 RDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANH 141
Query: 547 KP 548
KP
Sbjct: 142 KP 143
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 27.6 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 181 LVGFPNAGKSTFLKAISRARP--KIA 204
L GF AGK+T L+ I + KIA
Sbjct: 8 LTGFLGAGKTTLLRHILNEQHGYKIA 33
Score = 27.6 bits (60), Expect = 5.0
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 429 LVGFPNAGKSTFLKAISRARP--KIA 452
L GF AGK+T L+ I + KIA
Sbjct: 8 LTGFLGAGKTTLLRHILNEQHGYKIA 33
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 27.1 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
+ VGFP AGKSTF++ +
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVS 37
Score = 27.1 bits (59), Expect = 5.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
+ VGFP AGKSTF++ +
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVS 37
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 27.1 bits (59), Expect = 6.0
Identities = 12/55 (21%), Positives = 18/55 (32%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPG 233
I +VG +AGKS+ L+ T +P V + G
Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKG 83
Score = 27.1 bits (59), Expect = 6.0
Identities = 12/55 (21%), Positives = 18/55 (32%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPG 481
I +VG +AGKS+ L+ T +P V + G
Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKG 83
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 27.0 bits (60), Expect = 6.2
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 18/70 (25%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ L+G GK+T L+ I+ +P G I F D +
Sbjct: 35 LVLLGPSGCGKTTTLRMIAG-----------LEEPTEGRIYFGDRDVTYL-------PPK 76
Query: 239 HRNLGMGHQF 248
RN+ M Q
Sbjct: 77 DRNISMVFQS 86
Score = 27.0 bits (60), Expect = 6.2
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 18/70 (25%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ L+G GK+T L+ I+ +P G I F D +
Sbjct: 35 LVLLGPSGCGKTTTLRMIAG-----------LEEPTEGRIYFGDRDVTYL-------PPK 76
Query: 487 HRNLGMGHQF 496
RN+ M Q
Sbjct: 77 DRNISMVFQS 86
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.0 bits (58), Expect = 6.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 179 IGLVGFPNAGKSTFLKAISR 198
I L G+ N+GK +A+
Sbjct: 9 IFLTGYMNSGKDAIARALQV 28
Score = 27.0 bits (58), Expect = 6.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 427 IGLVGFPNAGKSTFLKAISR 446
I L G+ N+GK +A+
Sbjct: 9 IFLTGYMNSGKDAIARALQV 28
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 27.2 bits (60), Expect = 6.4
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 17/72 (23%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD--DFRKMSVADLPGLIE 236
G++G AGKST ++ ++ +P G + D + +S ++L
Sbjct: 34 YGVIGASGAGKSTLIRCVNL-----------LERPTEGSVLVDGQELTTLSESELTKA-- 80
Query: 237 GAHRNLGMGHQF 248
R +GM Q
Sbjct: 81 --RRQIGMIFQH 90
Score = 27.2 bits (60), Expect = 6.4
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 17/72 (23%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD--DFRKMSVADLPGLIE 484
G++G AGKST ++ ++ +P G + D + +S ++L
Sbjct: 34 YGVIGASGAGKSTLIRCVNL-----------LERPTEGSVLVDGQELTTLSESELTKA-- 80
Query: 485 GAHRNLGMGHQF 496
R +GM Q
Sbjct: 81 --RRQIGMIFQH 90
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 26.8 bits (58), Expect = 6.6
Identities = 11/76 (14%), Positives = 24/76 (31%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
I L G P GK+T K ++ + +D+ + D +++
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 66
Query: 239 HRNLGMGHQFLRHVER 254
+ G + +
Sbjct: 67 DNQMREGGVIVDYHGC 82
Score = 26.8 bits (58), Expect = 6.6
Identities = 11/76 (14%), Positives = 24/76 (31%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
I L G P GK+T K ++ + +D+ + D +++
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 66
Query: 487 HRNLGMGHQFLRHVER 502
+ G + +
Sbjct: 67 DNQMREGGVIVDYHGC 82
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (58), Expect = 6.7
Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 17/138 (12%)
Query: 172 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 231
+K++ L+G +GKSTFLK + +I T + F+
Sbjct: 2 LVKIL----LLGAGESGKSTFLK-----QMRIIHGQDPTKGIH--EYDFEIKNVPFKMVD 50
Query: 232 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 291
G + + + + V S ++N
Sbjct: 51 VGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNR--- 107
Query: 292 YKMNLLEKPIILLVNKMD 309
IIL +NK D
Sbjct: 108 ---VFSNVSIILFLNKTD 122
Score = 26.8 bits (58), Expect = 6.7
Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 17/138 (12%)
Query: 420 ELKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADL 479
+K++ L+G +GKSTFLK + +I T + F+
Sbjct: 2 LVKIL----LLGAGESGKSTFLK-----QMRIIHGQDPTKGIH--EYDFEIKNVPFKMVD 50
Query: 480 PGLIEGAHRNLGMGHQFLRHVERTKLIAMIVDVNGFQLGLKHPKRSCVETVLLLNKELEL 539
G + + + + V S ++N
Sbjct: 51 VGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNR--- 107
Query: 540 YKMNLLEKPIILLVNKMD 557
IIL +NK D
Sbjct: 108 ---VFSNVSIILFLNKTD 122
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 26.9 bits (59), Expect = 6.9
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD 222
++G +GKST + I+ +K + G + F++
Sbjct: 33 TLIIGPNGSGKSTLINVITGF-----------LKADEGRVYFEN 65
Score = 26.9 bits (59), Expect = 6.9
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDD 470
++G +GKST + I+ +K + G + F++
Sbjct: 33 TLIIGPNGSGKSTLINVITGF-----------LKADEGRVYFEN 65
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 27.1 bits (60), Expect = 6.9
Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 13/59 (22%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD--DFRKMSVADLPGLI 235
+ VG GKST + I R G I D + + L I
Sbjct: 47 VAFVGMSGGGKSTLINLIPR-----------FYDVTSGQILIDGHNIKDFLTGSLRNQI 94
Score = 27.1 bits (60), Expect = 6.9
Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 13/59 (22%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFD--DFRKMSVADLPGLI 483
+ VG GKST + I R G I D + + L I
Sbjct: 47 VAFVGMSGGGKSTLINLIPR-----------FYDVTSGQILIDGHNIKDFLTGSLRNQI 94
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 26.9 bits (58), Expect = 6.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 179 IGLVGFPNAGKSTFLKAISRA 199
I L G +AGKS ++ +
Sbjct: 6 IILNGGSSAGKSGIVRCLQSV 26
Score = 26.9 bits (58), Expect = 6.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 427 IGLVGFPNAGKSTFLKAISRA 447
I L G +AGKS ++ +
Sbjct: 6 IILNGGSSAGKSGIVRCLQSV 26
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.7 bits (58), Expect = 7.3
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 173 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 231
+K++ L+G GKS L + + I + + + + K+ + D
Sbjct: 3 MKIL----LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDT 58
Query: 232 PG 233
G
Sbjct: 59 AG 60
Score = 26.7 bits (58), Expect = 7.3
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 421 LKLIADIGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFR-KMSVADL 479
+K++ L+G GKS L + + I + + + + K+ + D
Sbjct: 3 MKIL----LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDT 58
Query: 480 PG 481
G
Sbjct: 59 AG 60
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 26.8 bits (58), Expect = 7.9
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 163 KGEELAVR-LELKLIADIG----LVGFPNAGKSTFLKAISRARPKI 203
G+E L L + + G GKST ++A++ P+I
Sbjct: 10 VGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEI 55
Score = 26.8 bits (58), Expect = 7.9
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 411 KGEELAVR-LELKLIADIG----LVGFPNAGKSTFLKAISRARPKI 451
G+E L L + + G GKST ++A++ P+I
Sbjct: 10 VGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEI 55
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 26.8 bits (59), Expect = 8.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 179 IGLVGFPNAGKSTFLKAISR 198
+ L+G AGK+T L AI+
Sbjct: 35 VTLIGANGAGKTTTLSAIAG 54
Score = 26.8 bits (59), Expect = 8.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 427 IGLVGFPNAGKSTFLKAISR 446
+ L+G AGK+T L AI+
Sbjct: 35 VTLIGANGAGKTTTLSAIAG 54
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.8 bits (59), Expect = 8.4
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 179 IGLVGFPNAGKSTFLKAISR 198
LVG +GKST +
Sbjct: 43 TALVGPNGSGKSTVAALLQN 62
Score = 26.8 bits (59), Expect = 8.4
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 427 IGLVGFPNAGKSTFLKAISR 446
LVG +GKST +
Sbjct: 43 TALVGPNGSGKSTVAALLQN 62
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 26.6 bits (58), Expect = 8.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 179 IGLVGFPNAGKSTFLKAISR 198
++G AGK+ FL+ I+
Sbjct: 29 FVILGPTGAGKTLFLELIAG 48
Score = 26.6 bits (58), Expect = 8.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 427 IGLVGFPNAGKSTFLKAISR 446
++G AGK+ FL+ I+
Sbjct: 29 FVILGPTGAGKTLFLELIAG 48
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 26.7 bits (59), Expect = 9.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 179 IGLVGFPNAGKSTFLKAISR 198
+ LVG +GKST I+R
Sbjct: 44 VALVGRSGSGKSTIASLITR 63
Score = 26.7 bits (59), Expect = 9.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 427 IGLVGFPNAGKSTFLKAISR 446
+ LVG +GKST I+R
Sbjct: 44 VALVGRSGSGKSTIASLITR 63
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 26.1 bits (56), Expect = 9.6
Identities = 11/62 (17%), Positives = 16/62 (25%), Gaps = 11/62 (17%)
Query: 179 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 238
+ L G P +GKST +A++ P DD
Sbjct: 7 LLLSGHPGSGKSTIAEALANLPG----VPKV-------HFHSDDLWGYIKHGRIDPWLPQ 55
Query: 239 HR 240
Sbjct: 56 SH 57
Score = 26.1 bits (56), Expect = 9.6
Identities = 11/62 (17%), Positives = 16/62 (25%), Gaps = 11/62 (17%)
Query: 427 IGLVGFPNAGKSTFLKAISRARPKIASYPFTTIKPNVGVITFDDFRKMSVADLPGLIEGA 486
+ L G P +GKST +A++ P DD
Sbjct: 7 LLLSGHPGSGKSTIAEALANLPG----VPKV-------HFHSDDLWGYIKHGRIDPWLPQ 55
Query: 487 HR 488
Sbjct: 56 SH 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.137 0.386
Gapped
Lambda K H
0.267 0.0387 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,349,294
Number of extensions: 116035
Number of successful extensions: 954
Number of sequences better than 10.0: 1
Number of HSP's gapped: 907
Number of HSP's successfully gapped: 258
Length of query: 654
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 563
Effective length of database: 1,158,166
Effective search space: 652047458
Effective search space used: 652047458
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.3 bits)