Query psy10860
Match_columns 91
No_of_seqs 182 out of 1004
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 20:19:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfm_A SAPH, putative uncharac 99.9 1.3E-21 4.6E-26 135.2 10.0 87 4-90 117-215 (270)
2 1z2w_A Vacuolar protein sortin 99.8 3.4E-20 1.2E-24 122.0 12.9 86 5-90 78-164 (192)
3 3ck2_A Conserved uncharacteriz 99.8 1.9E-20 6.5E-25 121.6 11.4 85 4-90 65-149 (176)
4 2a22_A Vacuolar protein sortin 99.8 2.2E-19 7.6E-24 120.1 12.9 86 5-90 102-188 (215)
5 3rqz_A Metallophosphoesterase; 99.8 6.2E-19 2.1E-23 119.6 8.3 79 6-90 104-207 (246)
6 1nnw_A Hypothetical protein; s 99.8 9.5E-18 3.2E-22 113.2 12.4 84 5-90 120-211 (252)
7 2kkn_A Uncharacterized protein 99.7 1.5E-17 5.2E-22 108.8 7.7 76 4-90 90-165 (178)
8 1s3l_A Hypothetical protein MJ 99.7 1.6E-16 5.6E-21 104.7 8.8 70 10-90 109-179 (190)
9 1su1_A Hypothetical protein YF 99.6 6.6E-16 2.3E-20 102.9 8.0 76 6-91 112-187 (208)
10 1g5b_A Serine/threonine protei 99.4 1.1E-12 3.6E-17 87.4 8.4 71 4-74 120-208 (221)
11 1uf3_A Hypothetical protein TT 99.4 2.1E-12 7.3E-17 84.7 7.5 65 16-90 149-216 (228)
12 3rl5_A Metallophosphoesterase 99.3 1.8E-12 6.3E-17 91.0 7.1 66 15-80 207-283 (296)
13 2yvt_A Hypothetical protein AQ 99.3 9.7E-12 3.3E-16 83.5 8.8 66 15-90 173-248 (260)
14 1xm7_A Hypothetical protein AQ 99.3 1.5E-11 5E-16 80.5 7.0 69 6-74 95-174 (195)
15 3d03_A Phosphohydrolase; glyce 99.3 3.8E-11 1.3E-15 80.7 9.1 76 15-90 148-241 (274)
16 3ib7_A ICC protein; metallopho 99.2 1.2E-10 4E-15 80.3 9.0 73 18-90 176-265 (330)
17 1ute_A Protein (II purple acid 98.9 1.2E-08 4.2E-13 69.2 8.9 60 16-75 179-245 (313)
18 2nxf_A Putative dimetal phosph 98.8 1.7E-08 5.9E-13 68.6 8.5 71 16-90 221-300 (322)
19 2xmo_A LMO2642 protein; phosph 98.8 2.5E-08 8.7E-13 71.8 9.2 68 16-90 236-317 (443)
20 4fbw_A DNA repair protein RAD3 98.7 8.1E-09 2.8E-13 75.4 3.9 75 15-90 210-289 (417)
21 4fbk_A DNA repair and telomere 98.7 1E-08 3.4E-13 75.9 4.3 75 15-90 273-352 (472)
22 2q8u_A Exonuclease, putative; 98.7 2.3E-08 7.7E-13 70.0 5.2 75 15-90 184-265 (336)
23 3av0_A DNA double-strand break 98.7 5.2E-09 1.8E-13 74.9 1.9 75 15-90 170-248 (386)
24 3t1i_A Double-strand break rep 98.6 1.6E-08 5.3E-13 74.2 2.2 74 16-90 230-308 (431)
25 3tho_B Exonuclease, putative; 98.4 4.9E-07 1.7E-11 64.6 6.3 75 15-90 166-247 (379)
26 2qjc_A Diadenosine tetraphosph 98.3 5.5E-07 1.9E-11 61.5 3.8 30 44-73 196-227 (262)
27 3tgh_A Glideosome-associated p 98.2 1.1E-05 3.7E-10 57.4 10.0 61 16-76 191-257 (342)
28 3qfk_A Uncharacterized protein 97.9 1.1E-05 3.8E-10 59.8 5.1 59 16-75 200-270 (527)
29 1hp1_A 5'-nucleotidase; metall 97.9 3.5E-05 1.2E-09 56.8 6.9 60 16-75 185-269 (516)
30 1ii7_A MRE11 nuclease; RAD50, 97.8 2.9E-05 9.9E-10 54.2 5.5 31 44-74 198-228 (333)
31 1xzw_A Purple acid phosphatase 97.6 0.00013 4.6E-09 52.3 6.4 59 17-75 279-364 (426)
32 2wdc_A SOXB, sulfur oxidation 97.3 0.00086 2.9E-08 50.3 7.9 52 16-74 256-310 (562)
33 2qfp_A Purple acid phosphatase 97.2 0.0013 4.5E-08 47.0 7.3 40 17-56 272-319 (424)
34 3ive_A Nucleotidase; structura 97.1 0.0022 7.4E-08 47.4 7.5 61 15-75 186-258 (509)
35 3gve_A YFKN protein; alpha-bet 97.0 0.001 3.6E-08 47.0 5.3 58 16-75 209-286 (341)
36 3jyf_A 2',3'-cyclic nucleotide 97.0 0.00078 2.7E-08 47.7 4.6 60 16-75 203-279 (339)
37 3ztv_A NAD nucleotidase, NADN; 96.7 0.0035 1.2E-07 47.0 6.2 53 16-75 196-270 (579)
38 2z1a_A 5'-nucleotidase; metal- 96.5 0.0064 2.2E-07 45.3 6.3 53 16-75 208-280 (552)
39 3flo_A DNA polymerase alpha su 96.2 0.011 3.7E-07 43.8 5.9 44 43-90 381-424 (460)
40 3c9f_A 5'-nucleotidase; 2',3'- 96.2 0.015 5.1E-07 43.6 6.8 59 16-74 199-261 (557)
41 4h2g_A 5'-nucleotidase; dimer, 96.0 0.016 5.4E-07 43.1 6.3 53 16-75 210-283 (546)
42 2z72_A Protein-tyrosine-phosph 95.7 0.032 1.1E-06 39.2 6.5 40 34-73 268-309 (342)
43 1t70_A Phosphatase; crystal, X 95.2 0.033 1.1E-06 38.1 4.9 47 16-68 141-192 (255)
44 4h1s_A 5'-nucleotidase; hydrol 95.1 0.018 6.1E-07 42.6 3.6 53 16-75 188-261 (530)
45 1wao_1 Serine/threonine protei 94.6 0.072 2.5E-06 38.6 5.8 28 33-60 386-413 (477)
46 1t71_A Phosphatase, conserved 94.6 0.039 1.3E-06 38.3 4.2 26 43-68 174-202 (281)
47 2z06_A Putative uncharacterize 92.8 0.099 3.4E-06 35.7 3.5 26 43-68 161-189 (252)
48 2yeq_A Apased, PHOD, alkaline 81.9 4.8 0.00017 29.8 6.7 27 34-60 360-388 (527)
49 2dfj_A Diadenosinetetraphospha 81.1 3.1 0.00011 28.3 5.1 28 45-72 220-248 (280)
50 3e7a_A PP-1A, serine/threonine 69.3 15 0.0005 25.5 6.0 25 33-57 228-252 (299)
51 3h63_A Serine/threonine-protei 68.7 23 0.00079 24.6 7.0 56 33-90 233-290 (315)
52 3hgm_A Universal stress protei 65.4 13 0.00046 21.4 4.6 33 18-56 90-122 (147)
53 3icf_A PPT, serine/threonine-p 65.0 19 0.00064 25.3 5.9 27 33-59 237-263 (335)
54 3qvl_A Putative hydantoin race 64.8 6.2 0.00021 26.3 3.3 32 40-71 170-205 (245)
55 3sk3_A Acetate kinase, acetoki 62.0 3.5 0.00012 30.1 1.7 25 51-75 7-32 (415)
56 3fdx_A Putative filament prote 60.6 15 0.00051 21.1 4.2 31 18-54 86-116 (143)
57 1mjh_A Protein (ATP-binding do 60.1 14 0.00049 21.8 4.1 32 19-56 101-132 (162)
58 2z08_A Universal stress protei 58.3 15 0.0005 21.1 3.9 24 33-56 88-111 (137)
59 3s3t_A Nucleotide-binding prot 55.5 16 0.00054 21.1 3.7 33 18-56 87-120 (146)
60 1zuw_A Glutamate racemase 1; ( 54.8 11 0.00037 25.3 3.2 32 41-72 174-211 (272)
61 3e0j_A DNA polymerase subunit 54.7 18 0.00061 26.8 4.4 17 10-26 339-355 (476)
62 2dwu_A Glutamate racemase; iso 53.8 13 0.00043 25.0 3.4 32 41-72 177-214 (276)
63 2gzm_A Glutamate racemase; enz 53.3 13 0.00045 24.8 3.4 30 42-71 174-209 (267)
64 2e1z_A Propionate kinase; TDCD 53.3 3.7 0.00013 30.0 0.6 17 59-75 15-31 (415)
65 1tq8_A Hypothetical protein RV 52.1 26 0.00087 21.0 4.4 33 18-56 99-131 (163)
66 1q77_A Hypothetical protein AQ 51.7 19 0.00065 20.6 3.6 22 33-54 98-119 (138)
67 3dlo_A Universal stress protei 51.7 19 0.00064 21.5 3.7 23 33-55 106-128 (155)
68 3ist_A Glutamate racemase; str 51.5 9.5 0.00032 25.8 2.4 31 42-72 176-212 (269)
69 2dum_A Hypothetical protein PH 51.1 21 0.00073 21.2 3.9 32 20-57 99-130 (170)
70 3tnj_A Universal stress protei 51.1 18 0.00063 20.9 3.5 31 19-55 90-120 (150)
71 3fg9_A Protein of universal st 50.3 18 0.00063 21.2 3.4 35 17-57 96-132 (156)
72 3uhf_A Glutamate racemase; str 49.8 16 0.00054 24.9 3.3 29 44-72 196-230 (274)
73 3ojc_A Putative aspartate/glut 49.7 12 0.00041 24.5 2.7 20 41-60 187-206 (231)
74 3out_A Glutamate racemase; str 49.6 9.6 0.00033 25.7 2.2 31 42-72 176-210 (268)
75 2jfn_A Glutamate racemase; cel 47.7 13 0.00046 25.1 2.7 29 43-71 195-229 (285)
76 2gm3_A Unknown protein; AT3G01 46.4 45 0.0015 19.9 6.2 33 19-57 105-137 (175)
77 2zsk_A PH1733, 226AA long hypo 45.5 22 0.00075 22.9 3.4 17 43-59 184-200 (226)
78 1jmv_A USPA, universal stress 45.4 18 0.00063 20.7 2.8 21 33-53 91-111 (141)
79 3e9v_A Protein BTG2; B-cell tr 43.8 8.6 0.00029 23.2 1.1 16 63-78 93-108 (120)
80 3s81_A Putative aspartate race 42.8 15 0.00053 24.7 2.4 30 42-71 207-240 (268)
81 3ih5_A Electron transfer flavo 42.5 17 0.00057 23.7 2.5 22 34-55 81-102 (217)
82 3lwz_A 3-dehydroquinate dehydr 42.2 13 0.00043 23.5 1.7 57 17-73 8-85 (153)
83 1gqo_A Dehydroquinase; dehydra 41.9 11 0.00037 23.6 1.4 56 18-73 2-78 (143)
84 2vvt_A Glutamate racemase; iso 41.8 15 0.00051 24.9 2.2 30 42-71 195-230 (290)
85 1uqr_A 3-dehydroquinate dehydr 41.5 13 0.00045 23.5 1.7 56 18-73 3-79 (154)
86 2jfz_A Glutamate racemase; cel 41.4 24 0.00081 23.3 3.1 29 43-71 172-212 (255)
87 1gtz_A 3-dehydroquinate dehydr 40.9 11 0.00039 23.8 1.4 57 17-73 7-84 (156)
88 2jfq_A Glutamate racemase; cel 40.8 14 0.00048 25.0 2.0 30 42-71 194-229 (286)
89 1o97_C Electron transferring f 39.8 19 0.00065 24.2 2.5 21 35-55 103-123 (264)
90 2eq5_A 228AA long hypothetical 38.9 18 0.00063 23.1 2.3 30 42-71 172-207 (228)
91 3idf_A USP-like protein; unive 38.3 46 0.0016 18.8 3.8 30 19-56 84-113 (138)
92 1jfl_A Aspartate racemase; alp 37.7 17 0.00058 23.4 1.9 18 42-59 184-201 (228)
93 1efp_B ETF, protein (electron 36.8 25 0.00084 23.5 2.6 21 35-55 104-124 (252)
94 1efv_B Electron transfer flavo 36.3 25 0.00086 23.6 2.6 21 35-55 107-127 (255)
95 3fet_A Electron transfer flavo 32.5 33 0.0011 21.4 2.6 19 35-55 62-80 (166)
96 3oon_A Outer membrane protein 31.8 75 0.0026 18.2 4.3 21 36-56 39-60 (123)
97 3rxy_A NIF3 protein; structura 31.2 68 0.0023 22.1 4.1 38 17-57 196-233 (278)
98 3dkr_A Esterase D; alpha beta 29.7 87 0.003 18.7 4.3 43 7-50 13-55 (251)
99 1uxo_A YDEN protein; hydrolase 29.1 90 0.0031 18.2 4.9 9 45-53 65-73 (192)
100 3mt0_A Uncharacterized protein 28.5 65 0.0022 20.9 3.7 25 33-57 226-250 (290)
101 1efv_A Electron transfer flavo 28.3 38 0.0013 23.4 2.5 20 35-54 77-96 (315)
102 1o97_D Electron transferring f 28.1 38 0.0013 23.5 2.5 20 35-54 78-97 (320)
103 2ll1_A U1-TRTX-SP1A; toxin; NM 26.8 18 0.0006 16.4 0.4 8 50-57 2-9 (33)
104 2oho_A Glutamate racemase; iso 26.4 63 0.0022 21.5 3.3 27 45-71 185-217 (273)
105 1ekj_A Beta-carbonic anhydrase 25.6 22 0.00075 23.3 0.9 17 40-56 99-116 (221)
106 2v5b_A Triosephosphate isomera 25.3 39 0.0013 22.7 2.1 20 37-56 74-93 (244)
107 1b73_A Glutamate racemase; iso 25.2 61 0.0021 21.2 3.0 28 45-72 171-203 (254)
108 3khn_A MOTB protein, putative; 25.0 48 0.0016 20.6 2.4 22 35-56 72-94 (174)
109 3loq_A Universal stress protei 24.6 1.3E+02 0.0044 19.4 4.6 25 33-57 240-264 (294)
110 3cyp_B Chemotaxis protein MOTB 24.5 48 0.0016 19.7 2.2 21 36-56 26-48 (138)
111 1wy5_A TILS, hypothetical UPF0 24.4 54 0.0018 22.2 2.7 17 37-53 118-134 (317)
112 4ijn_A Acetate kinase, acetoki 24.2 30 0.001 25.0 1.4 13 63-75 24-36 (398)
113 3m9y_A Triosephosphate isomera 24.1 43 0.0015 22.6 2.1 20 38-57 84-103 (254)
114 2zvy_A Chemotaxis protein MOTB 23.9 58 0.002 20.5 2.6 20 36-55 82-101 (183)
115 1tgl_A Triacyl-glycerol acylhy 23.8 58 0.002 21.5 2.7 11 43-53 134-144 (269)
116 2jgq_A Triosephosphate isomera 23.5 45 0.0015 22.2 2.1 19 38-56 75-93 (233)
117 3th6_A Triosephosphate isomera 23.4 45 0.0015 22.5 2.1 19 38-56 81-99 (249)
118 1g5c_A Beta-carbonic anhydrase 23.4 26 0.00088 21.9 0.9 15 42-56 76-91 (170)
119 2w3q_A Carbonic anhydrase 2; l 23.2 25 0.00087 23.5 0.8 16 41-56 116-132 (243)
120 3qst_A Triosephosphate isomera 23.1 45 0.0015 22.5 2.1 19 38-56 83-101 (255)
121 2re2_A Uncharacterized protein 23.1 69 0.0024 19.1 2.8 22 35-56 70-91 (136)
122 2hqs_H Peptidoglycan-associate 23.1 83 0.0028 18.1 3.1 20 37-56 29-49 (118)
123 1r2r_A TIM, triosephosphate is 23.1 46 0.0016 22.4 2.1 19 38-56 81-99 (248)
124 3ta6_A Triosephosphate isomera 23.0 46 0.0016 22.7 2.1 19 38-56 86-104 (267)
125 2vxn_A Triosephosphate isomera 23.0 46 0.0016 22.4 2.1 19 38-56 82-100 (251)
126 2yc6_A Triosephosphate isomera 22.8 47 0.0016 22.5 2.1 19 38-56 82-100 (257)
127 4g1k_A Triosephosphate isomera 22.7 46 0.0016 22.8 2.1 20 38-57 106-125 (272)
128 1ney_A TIM, triosephosphate is 22.7 47 0.0016 22.3 2.1 19 38-56 80-98 (247)
129 2nz2_A Argininosuccinate synth 22.7 48 0.0016 23.8 2.2 20 35-54 102-121 (413)
130 1m6j_A TIM, TPI, triosephospha 22.7 47 0.0016 22.5 2.1 19 38-56 88-106 (261)
131 1yya_A Triosephosphate isomera 22.5 48 0.0017 22.3 2.1 19 38-56 80-98 (250)
132 1o5x_A TIM, triosephosphate is 22.3 49 0.0017 22.3 2.1 19 38-56 81-99 (248)
133 2j27_A Triosephosphate isomera 22.2 49 0.0017 22.3 2.1 19 38-56 81-99 (250)
134 3olq_A Universal stress protei 22.2 86 0.0029 20.5 3.3 33 19-57 247-279 (319)
135 2z15_A Protein TOB1; human TOB 22.0 33 0.0011 20.9 1.1 16 63-78 97-112 (130)
136 2fyw_A Conserved hypothetical 21.9 1E+02 0.0035 20.5 3.7 48 17-71 178-227 (267)
137 1ym3_A Carbonic anhydrase (car 21.6 29 0.001 22.6 0.9 15 41-55 100-115 (215)
138 3krs_A Triosephosphate isomera 21.1 53 0.0018 22.4 2.1 20 38-57 104-123 (271)
139 3bl5_A Queuosine biosynthesis 21.1 59 0.002 20.2 2.2 17 37-53 106-122 (219)
140 2aiz_P Outer membrane protein 21.0 82 0.0028 18.6 2.8 19 37-55 53-72 (134)
141 1b9b_A TIM, protein (triosepho 21.0 53 0.0018 22.2 2.1 19 38-56 82-100 (255)
142 3u80_A 3-dehydroquinate dehydr 20.9 39 0.0013 21.2 1.3 57 18-74 6-83 (151)
143 3qy1_A Carbonic anhydrase; str 20.7 31 0.001 22.8 0.8 16 41-56 89-105 (223)
144 2i9e_A Triosephosphate isomera 20.6 55 0.0019 22.2 2.1 19 38-56 80-98 (259)
145 2kgw_A Outer membrane protein 20.6 98 0.0033 17.9 3.1 20 37-56 47-67 (129)
146 2ie4_C PP2A-alpha;, serine/thr 20.5 1.7E+02 0.0059 19.9 4.7 25 33-57 222-246 (309)
147 1k92_A Argininosuccinate synth 20.4 68 0.0023 23.5 2.7 19 35-53 112-130 (455)
148 2zxe_G FXYD10, phospholemman-l 20.4 21 0.00073 19.7 0.0 10 64-73 63-72 (74)
149 4erh_A Outer membrane protein 20.2 61 0.0021 19.3 2.1 13 44-56 55-67 (148)
150 1kor_A Argininosuccinate synth 20.0 59 0.002 23.2 2.2 20 35-54 98-117 (400)
No 1
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.86 E-value=1.3e-21 Score=135.17 Aligned_cols=87 Identities=22% Similarity=0.280 Sum_probs=73.6
Q ss_pred CCCCceEEEEECCEEEEEecCCCCCC-------CCCHHHHHHHHhhCCCCEEEEcCccCccEEEE-CCEEEEccCCcCCC
Q psy10860 4 TSYPEKKVVTVGQFRIGLCHGHDIIP-------WGDPEALALLQRQLDVDILISGHTHKFEAYEH-ENKFYINPGSATGA 75 (91)
Q Consensus 4 ~~lP~~~~~~~~g~~i~~~Hg~~~~~-------~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~-~~~~~iNPGS~~~~ 75 (91)
..||....+++++.+|+++||++..+ ....+.+.++++..++|+++|||||+|..... +++++|||||+|+|
T Consensus 117 ~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~~~~~~~iNpGSvg~p 196 (270)
T 3qfm_A 117 HNQPLQIHRQFGDLTVGISHHLPDKNWGRELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYGTGGQLIVNPGSIGQP 196 (270)
T ss_dssp HSCCSEEEEEETTEEEEEESSBTTBSSSSTTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEECTTSCEEEEECCSSSC
T ss_pred HhCCCceEEEECCcEEEEEECCCCCCCCceecCCCcHHHHHHHhcccCCCEEEECCcCchHheeccCCEEEEECCCccCC
Confidence 36899999999999999999987543 23456677777778999999999999998874 79999999999999
Q ss_pred CCCCC----CCCceEEEee
Q psy10860 76 FNPLE----PLNGRYANVK 90 (91)
Q Consensus 76 ~~~~~----~~~a~Y~il~ 90 (91)
+++.+ +++|+|+||+
T Consensus 197 r~~~~~~~~~~~asyaild 215 (270)
T 3qfm_A 197 FFLDAQLRKDLRAQYMILE 215 (270)
T ss_dssp CCSSTTGGGCCCEEEEEEE
T ss_pred CCCCccccCCCCCEEEEEE
Confidence 98754 4689999997
No 2
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.85 E-value=3.4e-20 Score=121.97 Aligned_cols=86 Identities=71% Similarity=1.181 Sum_probs=74.5
Q ss_pred CCCceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCC-CCCCC
Q psy10860 5 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNP-LEPLN 83 (91)
Q Consensus 5 ~lP~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~-~~~~~ 83 (91)
.+|+...+++++.+|+++||+++.++.+.+.+.++++..++|++++||||.+...+.++++++||||++.|+.+ +....
T Consensus 78 ~lp~~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~ 157 (192)
T 1z2w_A 78 NYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNII 157 (192)
T ss_dssp TSCSEEEEEETTEEEEEECSCCCCBTTCHHHHHHHHHHHSSSEEECCSSCCCEEEEETTEEEEECCCTTCCCCSSCSCCC
T ss_pred cCCcceEEEECCEEEEEECCCcCCCCCCHHHHHHHHHhcCCCEEEECCcCcCccEeECCEEEEECCcccccCCCCCcCCC
Confidence 68999999999999999999998777777888877777899999999999999888899999999999987643 12346
Q ss_pred ceEEEee
Q psy10860 84 GRYANVK 90 (91)
Q Consensus 84 a~Y~il~ 90 (91)
++|++++
T Consensus 158 ~~y~il~ 164 (192)
T 1z2w_A 158 PSFVLMD 164 (192)
T ss_dssp CEEEEEE
T ss_pred CcEEEEE
Confidence 8999987
No 3
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.84 E-value=1.9e-20 Score=121.59 Aligned_cols=85 Identities=26% Similarity=0.368 Sum_probs=74.6
Q ss_pred CCCCceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCC
Q psy10860 4 TSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLN 83 (91)
Q Consensus 4 ~~lP~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~ 83 (91)
..+|+...+++++.+|+++||+++.++.+.+.+.+++++.++|++++||||++...+.++++++||||++.|+++. +.
T Consensus 65 ~~~p~~~~~~~~~~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~~~~~~~inpGs~~~~~~~~--~~ 142 (176)
T 3ck2_A 65 AGYPERLVTELGSTKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAWLEGKILFLNPGSISQPRGTI--RE 142 (176)
T ss_dssp TTCCSEEEEEETTEEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEEEETTEEEEEECCSSSCCTTC--CS
T ss_pred hcCCcEEEEEECCeEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcEEECCEEEEECCCCCcCCCCC--CC
Confidence 4689999999999999999999887666667777777788999999999999998888999999999999998653 36
Q ss_pred ceEEEee
Q psy10860 84 GRYANVK 90 (91)
Q Consensus 84 a~Y~il~ 90 (91)
++|++++
T Consensus 143 ~~y~il~ 149 (176)
T 3ck2_A 143 CLYARVE 149 (176)
T ss_dssp CCEEEEE
T ss_pred CeEEEEE
Confidence 8999986
No 4
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.82 E-value=2.2e-19 Score=120.14 Aligned_cols=86 Identities=44% Similarity=0.903 Sum_probs=73.9
Q ss_pred CCCceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCC-CCCCC
Q psy10860 5 SYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNP-LEPLN 83 (91)
Q Consensus 5 ~lP~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~-~~~~~ 83 (91)
.+|+...++.++.+|+++||++..++.+.+.+.++++..++|++++||||.+...+.++++++||||++.++.+ +..+.
T Consensus 102 ~lp~~~~~~~~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~inpGS~~~~~~~~~~~~~ 181 (215)
T 2a22_A 102 VFPEYVVVQIGEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAP 181 (215)
T ss_dssp CCCSEEEEEETTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEEEETTEEEEECCCSSCCCCTTSTTCC
T ss_pred hCCceEEEecCCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCCCccEeeCCEEEEECCcccccCCCCCCCCC
Confidence 58988899999999999999998777778888877777899999999999999888899999999999986532 12346
Q ss_pred ceEEEee
Q psy10860 84 GRYANVK 90 (91)
Q Consensus 84 a~Y~il~ 90 (91)
++|++++
T Consensus 182 ~~y~il~ 188 (215)
T 2a22_A 182 PSFMLMA 188 (215)
T ss_dssp CEEEEEE
T ss_pred CcEEEEE
Confidence 8999987
No 5
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.78 E-value=6.2e-19 Score=119.58 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=62.5
Q ss_pred CCceEEEEECCEEEEEecCCCCCCC----CCHHHHHHHHhhCCCCEEEEcCccCccEEE---------------------
Q psy10860 6 YPEKKVVTVGQFRIGLCHGHDIIPW----GDPEALALLQRQLDVDILISGHTHKFEAYE--------------------- 60 (91)
Q Consensus 6 lP~~~~~~~~g~~i~~~Hg~~~~~~----~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~--------------------- 60 (91)
+|..... + +++++||++..+. .....+.+.++..++|+++|||||+|+...
T Consensus 104 lp~~~~~--~--~i~~~Hg~p~~~~~~~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l 179 (246)
T 3rqz_A 104 LPNRMID--G--DWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV 179 (246)
T ss_dssp CCSEEEE--T--TEEEESSCSSSTTTCCCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC
T ss_pred CCcEEEE--C--CEEEEECCcCCccccccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec
Confidence 5654432 2 6999999987543 245566777778899999999999998776
Q ss_pred ECCEEEEccCCcCCCCCCCCCCCceEEEee
Q psy10860 61 HENKFYINPGSATGAFNPLEPLNGRYANVK 90 (91)
Q Consensus 61 ~~~~~~iNPGS~~~~~~~~~~~~a~Y~il~ 90 (91)
.+++++|||||+|+|++++ ++|+|+|++
T Consensus 180 ~~g~~ivNpGSVG~Prdg~--p~A~Y~i~d 207 (246)
T 3rqz_A 180 SSGRYIINPGAVGQPRDGD--PRASYAIFE 207 (246)
T ss_dssp SSSCEEEEECCSSCCCSSC--CSEEEEEEE
T ss_pred CCCeEEEECCccCCCCCcC--CcceEEEEE
Confidence 2369999999999999764 599999997
No 6
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.77 E-value=9.5e-18 Score=113.19 Aligned_cols=84 Identities=18% Similarity=0.086 Sum_probs=70.2
Q ss_pred CCCceEEEEECCEEEEEecCCCCCC-------CCCHHHHHHHHhhC-CCCEEEEcCccCccEEEECCEEEEccCCcCCCC
Q psy10860 5 SYPEKKVVTVGQFRIGLCHGHDIIP-------WGDPEALALLQRQL-DVDILISGHTHKFEAYEHENKFYINPGSATGAF 76 (91)
Q Consensus 5 ~lP~~~~~~~~g~~i~~~Hg~~~~~-------~~~~~~l~~~~~~~-~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~ 76 (91)
++|....+++++.+|+++||++..+ ....+.+.+.++.. ++|+++|||||++.....+++++|||||++.|+
T Consensus 120 ~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~~~~~~in~Gs~~~~~ 199 (252)
T 1nnw_A 120 DLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPP 199 (252)
T ss_dssp TSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEEETTEEEEEECCSSSCS
T ss_pred hCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHhcCCCCCEEEECCccccceEecCCeEEEECCCccCCC
Confidence 5788888888999999999998422 12345677777776 899999999999999889999999999999998
Q ss_pred CCCCCCCceEEEee
Q psy10860 77 NPLEPLNGRYANVK 90 (91)
Q Consensus 77 ~~~~~~~a~Y~il~ 90 (91)
++. +.++|++++
T Consensus 200 ~~~--~~~~y~il~ 211 (252)
T 1nnw_A 200 GKE--HKATFALVD 211 (252)
T ss_dssp SSS--CCEEEEEEE
T ss_pred CCC--CcceEEEEE
Confidence 653 478999987
No 7
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.72 E-value=1.5e-17 Score=108.83 Aligned_cols=76 Identities=32% Similarity=0.565 Sum_probs=60.0
Q ss_pred CCCCceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCC
Q psy10860 4 TSYPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLN 83 (91)
Q Consensus 4 ~~lP~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~ 83 (91)
..+|....++++|.+|+++||++. +....+.+.+.++ .++|+++|||||++...+.+++++|||||++.
T Consensus 90 ~~lp~~~~~~~~g~~i~l~HG~~~-~~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~~~~~~~iNpGS~~~--------- 158 (178)
T 2kkn_A 90 EHLPFSKVLLVEGVTIGMCHGWGA-PWDLKDRLLKVFN-EKPQVILFGHTHEPEDTVKAGVRFLNPGSLAE--------- 158 (178)
T ss_dssp GTSCSCEEEEETTEEEEECCSCCC-HHHHHHHHHHHSS-SCCSEEECCSCSSCCEEEETTEEEECCCCTTT---------
T ss_pred hhCCcceEEEECCEEEEEECCCCC-CCCHHHHHHHHhc-cCCCEEEECccCCCCeEEeCCEEEEECCCCCC---------
Confidence 468999999999999999999863 1111122222332 68999999999999998899999999999986
Q ss_pred ceEEEee
Q psy10860 84 GRYANVK 90 (91)
Q Consensus 84 a~Y~il~ 90 (91)
++|++++
T Consensus 159 ~sy~il~ 165 (178)
T 2kkn_A 159 GSYAVLE 165 (178)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 6999986
No 8
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.68 E-value=1.6e-16 Score=104.75 Aligned_cols=70 Identities=23% Similarity=0.314 Sum_probs=57.9
Q ss_pred EEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhC-CCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCceEEE
Q psy10860 10 KVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQL-DVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGRYAN 88 (91)
Q Consensus 10 ~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~-~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~Y~i 88 (91)
..++.++.+|+++||++.. +.+.+++. ++|++++||||.+...+.+++++|||||++. |++. .++|+|
T Consensus 109 ~~~~~~~~~ill~Hg~~~~-------l~~~~~~~~~~d~vl~GHtH~~~~~~~~~~~~iNpGs~~~-r~~~---~~~y~i 177 (190)
T 1s3l_A 109 ISVEIDDLKFFITHGHHQS-------VLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCG-YLTG---IPTIGI 177 (190)
T ss_dssp EEEEETTEEEEEEESCCHH-------HHHHHHHHSCCSEEEEECSSCCEEEEETTEEEEECCCSSC-TTTS---CCEEEE
T ss_pred eEEeeCCcEEEEECCChHH-------HHHHHHhcCCCCEEEECCCCCcceEEECCEEEEECCcccc-cCCC---CCEEEE
Confidence 5677899999999998731 33444454 8999999999999999899999999999998 6542 589999
Q ss_pred ee
Q psy10860 89 VK 90 (91)
Q Consensus 89 l~ 90 (91)
++
T Consensus 178 l~ 179 (190)
T 1s3l_A 178 LD 179 (190)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 9
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.64 E-value=6.6e-16 Score=102.92 Aligned_cols=76 Identities=28% Similarity=0.287 Sum_probs=60.1
Q ss_pred CCceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCce
Q psy10860 6 YPEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGR 85 (91)
Q Consensus 6 lP~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~ 85 (91)
+++...+++++.+|+++||++..+.. +.. ....|++++||||.+...+.+++++|||||+++|+++. .++
T Consensus 112 ~~~~~~~~~~g~~i~l~Hg~~~~~~~----l~~---~~~~d~vi~GHtH~~~~~~~~~~~~iNpGs~~~pr~~~---~~s 181 (208)
T 1su1_A 112 TAPWQQVLLEKQRLFLTHGHLFGPEN----LPA---LNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGN---PAS 181 (208)
T ss_dssp CCSEEEEECSSCEEEEECSSSSBTTB----CCC---CCTTCEEECCSSCCCEEEEETTEEEEECCCSSCCCTTC---CCE
T ss_pred cCceEEEEECCcEEEEECCCCCCcch----hhh---hcCCCEEEECCcccCccEEeCCEEEEECCCCcCCCCCC---CCE
Confidence 34667788899999999999864321 111 12459999999999998888999999999999998752 589
Q ss_pred EEEeeC
Q psy10860 86 YANVKS 91 (91)
Q Consensus 86 Y~il~~ 91 (91)
|++++.
T Consensus 182 y~il~~ 187 (208)
T 1su1_A 182 YGMLDN 187 (208)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999973
No 10
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.40 E-value=1.1e-12 Score=87.45 Aligned_cols=71 Identities=21% Similarity=0.266 Sum_probs=53.7
Q ss_pred CCCCceEEEEECCEEEEEecCCCCCCC------CCH-------HHHHHHHh-----hCCCCEEEEcCccCccEEEECCEE
Q psy10860 4 TSYPEKKVVTVGQFRIGLCHGHDIIPW------GDP-------EALALLQR-----QLDVDILISGHTHKFEAYEHENKF 65 (91)
Q Consensus 4 ~~lP~~~~~~~~g~~i~~~Hg~~~~~~------~~~-------~~l~~~~~-----~~~~dvvi~GHtH~~~~~~~~~~~ 65 (91)
..||....+++++.+|+++||+..... .+. +.+.+.++ ..++|++||||||.+...+.++++
T Consensus 120 ~~lP~~~~~~~~~~~i~~vHgg~~~~~~~~~~~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~vv~GHth~~~~~~~~~~~ 199 (221)
T 1g5b_A 120 DELPLIIELVSKDKKYVICHADYPFDEYEFGKPVDHQQVIWNRERISNSQNGIVKEIKGADTFIFGHTPAVKPLKFANQM 199 (221)
T ss_dssp TTCCSEEEEEETTEEEEECSSCCCSSBCCTTCCCCHHHHHHCCHHHHHHHTTCCCCCBTSSEEEECSSCCSSCEEETTEE
T ss_pred HhCCcEEEEEecCCeEEEEecCCChhhcccCCCccccccccCchhhhhhccccCCcccCCCEEEECCCCCccceeeCCEE
Confidence 468999999999999999999852110 111 22333333 357899999999999988899999
Q ss_pred EEccCCcCC
Q psy10860 66 YINPGSATG 74 (91)
Q Consensus 66 ~iNPGS~~~ 74 (91)
+|||||++.
T Consensus 200 ~in~Gs~~g 208 (221)
T 1g5b_A 200 YIDTGAVFC 208 (221)
T ss_dssp ECCCCHHHH
T ss_pred EEECCCCcC
Confidence 999999864
No 11
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.36 E-value=2.1e-12 Score=84.71 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=50.7
Q ss_pred CEEEEEecCCCCCC---CCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCceEEEee
Q psy10860 16 QFRIGLCHGHDIIP---WGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGRYANVK 90 (91)
Q Consensus 16 g~~i~~~Hg~~~~~---~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~Y~il~ 90 (91)
+.+|+++|+++... ....+.+.+++++.++|++++|||| +.....++++++||||++ .++|++++
T Consensus 149 ~~~il~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H-~~~~~~~~~~~in~Gs~~---------~~~~~i~~ 216 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKG-QKHEMLGASWVVVPGDLS---------EGEYSLLD 216 (228)
T ss_dssp CCEEEEESSCBCBTTTBTTSBHHHHHHHHHHCCSEEEECCSS-CEEEEETTEEEEECCBGG---------GTEEEEEE
T ss_pred CCeEEEEccCcccCCccccCHHHHHHHHHHhCCCEEEEcccc-cCccccCCceEEEecccC---------CCceEEEE
Confidence 57899999988542 2233456666667789999999999 666677999999999987 34888886
No 12
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.35 E-value=1.8e-12 Score=90.99 Aligned_cols=66 Identities=20% Similarity=0.161 Sum_probs=52.7
Q ss_pred CCEEEEEecCCCCCCC---------CCHHHHHHHH-hhCCCCEEEEcCccCccE-EEECCEEEEccCCcCCCCCCCC
Q psy10860 15 GQFRIGLCHGHDIIPW---------GDPEALALLQ-RQLDVDILISGHTHKFEA-YEHENKFYINPGSATGAFNPLE 80 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~---------~~~~~l~~~~-~~~~~dvvi~GHtH~~~~-~~~~~~~~iNPGS~~~~~~~~~ 80 (91)
++.+|++|||+++... ...+.+.+.+ ++.++++++|||+|.++. .+.+++++|||||++.++.+..
T Consensus 207 ~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~~g~t~vvNpGs~~~~~~~~n 283 (296)
T 3rl5_A 207 EGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTN 283 (296)
T ss_dssp TTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEECSSCEEEECBCSCTTSCCCS
T ss_pred CCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEEECCEEEEECCcCCcCcCCCC
Confidence 4678999999997641 2335666666 578999999999999875 5568999999999999988754
No 13
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.31 E-value=9.7e-12 Score=83.47 Aligned_cols=66 Identities=20% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCCCC----------CCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCc
Q psy10860 15 GQFRIGLCHGHDIIP----------WGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNG 84 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~----------~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a 84 (91)
++.+|+++|+++... ....+.+.+++++.++|+++||||| +...+.++++++||||++. .
T Consensus 173 ~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~~~~~~~~~in~Gs~~~---------g 242 (260)
T 2yvt_A 173 PRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGHELVGNTIVVNPGEFEE---------G 242 (260)
T ss_dssp CCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEEEEETTEEEEECCBGGG---------T
T ss_pred CCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCcEEeCCEEEEeCCCCCC---------C
Confidence 357899999988532 1123456667767799999999999 7777789999999999884 1
Q ss_pred eEEEee
Q psy10860 85 RYANVK 90 (91)
Q Consensus 85 ~Y~il~ 90 (91)
+|++++
T Consensus 243 ~~~ii~ 248 (260)
T 2yvt_A 243 RYAFLD 248 (260)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 888876
No 14
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.26 E-value=1.5e-11 Score=80.52 Aligned_cols=69 Identities=20% Similarity=0.070 Sum_probs=52.6
Q ss_pred CCceEEEE-ECCEEEEEecCCCCCCCCC-----HHHHHHHHhhCCCCEEEEcCccCccEEEEC-----CEEEEccCCcCC
Q psy10860 6 YPEKKVVT-VGQFRIGLCHGHDIIPWGD-----PEALALLQRQLDVDILISGHTHKFEAYEHE-----NKFYINPGSATG 74 (91)
Q Consensus 6 lP~~~~~~-~~g~~i~~~Hg~~~~~~~~-----~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~-----~~~~iNPGS~~~ 74 (91)
+|+...++ +++.+|+++||++...... .+.+.+.+++.++|+++|||||.+.....+ +..++|+|+-..
T Consensus 95 l~~~~~l~~~~~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~~~g~~~~g~~~~nvg~~~~ 174 (195)
T 1xm7_A 95 IYDFYKIIEHKGKRILLSHYPAKDPITERYPDRQEMVREIYFKENCDLLIHGHVHWNREGIKCACKDYRIECINANVEWN 174 (195)
T ss_dssp EESSEEEEEETTEEEEEESSCSSCSSCCSCHHHHHHHHHHHHHTTCSEEEECCCCCCSCC--CCTTSSSCCEEECBGGGT
T ss_pred hhHHHHHHhcCCcEEEEEccCCcCCCcccccchHHHHHHHHHHcCCcEEEECCcCCCCcccccccccCCcceEEEeEecc
Confidence 56666777 8999999999998654322 456777777788999999999999877664 677799998543
No 15
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.25 E-value=3.8e-11 Score=80.73 Aligned_cols=76 Identities=11% Similarity=0.066 Sum_probs=55.8
Q ss_pred CCEEEEEecCCCCCCC---------CCHHHHHHHHhhC-CCCEEEEcCccCccEEEECC-EEEEccCCcCCCCCC-----
Q psy10860 15 GQFRIGLCHGHDIIPW---------GDPEALALLQRQL-DVDILISGHTHKFEAYEHEN-KFYINPGSATGAFNP----- 78 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~---------~~~~~l~~~~~~~-~~dvvi~GHtH~~~~~~~~~-~~~iNPGS~~~~~~~----- 78 (91)
++.+|+++|+++.... ...+.+.+++++. ++|++++||+|.+.....++ .+++||||++++...
T Consensus 148 ~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~~g~~~~~~pg~~~~~~~~~~~~~ 227 (274)
T 3d03_A 148 DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYCHADTD 227 (274)
T ss_dssp TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEETTEEEEECCCSSCBCCCCSSCCS
T ss_pred CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheECCEEEEEcCCcceeeccCCCccc
Confidence 4578999999886431 1234566677666 79999999999998887888 578999999876421
Q ss_pred --CCCCCceEEEee
Q psy10860 79 --LEPLNGRYANVK 90 (91)
Q Consensus 79 --~~~~~a~Y~il~ 90 (91)
.....++|++++
T Consensus 228 ~~~~~~~~gy~i~~ 241 (274)
T 3d03_A 228 PYYDLSPASCLMHR 241 (274)
T ss_dssp CEEBCCCCEEEEEE
T ss_pred cccccCCCceEEEE
Confidence 012357999986
No 16
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.18 E-value=1.2e-10 Score=80.30 Aligned_cols=73 Identities=18% Similarity=0.039 Sum_probs=55.9
Q ss_pred EEEEecCCCCCCC---------CCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCC--------C
Q psy10860 18 RIGLCHGHDIIPW---------GDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPL--------E 80 (91)
Q Consensus 18 ~i~~~Hg~~~~~~---------~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~--------~ 80 (91)
+|+++|+.+.... ...+.+.+++++.++|++++||+|.+.....+++.++|+||.+...... .
T Consensus 176 ~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~ 255 (330)
T 3ib7_A 176 TILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGR 255 (330)
T ss_dssp EEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEEETTEEEEECCCSSCEECTTSCTTCCCEE
T ss_pred eEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccceECCEEEEecCcceeccCCCCCCcceecc
Confidence 5788998886431 2456677788888999999999999998889999999999998643221 1
Q ss_pred CCCceEEEee
Q psy10860 81 PLNGRYANVK 90 (91)
Q Consensus 81 ~~~a~Y~il~ 90 (91)
...++|++++
T Consensus 256 ~~~~gy~iv~ 265 (330)
T 3ib7_A 256 DGAQGCNLVH 265 (330)
T ss_dssp SCSCEEEEEE
T ss_pred CCCCceEEEE
Confidence 2246899986
No 17
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=98.88 E-value=1.2e-08 Score=69.24 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=45.4
Q ss_pred CEEEEEecCCCCCCCC---C---HHHHHHHHhhCCCCEEEEcCccCccEEE-ECCEEEEccCCcCCC
Q psy10860 16 QFRIGLCHGHDIIPWG---D---PEALALLQRQLDVDILISGHTHKFEAYE-HENKFYINPGSATGA 75 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~---~---~~~l~~~~~~~~~dvvi~GHtH~~~~~~-~~~~~~iNPGS~~~~ 75 (91)
..+|+++|++++.... . .+.+..++++.+++++++||+|...... .+++.+||+||.|..
T Consensus 179 ~~~iv~~H~p~~~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~ 245 (313)
T 1ute_A 179 DYVLVAGHYPVWSIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFM 245 (313)
T ss_dssp SEEEEECSSCSSCCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCC
T ss_pred CeEEEEECCCCccCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCc
Confidence 5789999998864321 1 2345556677899999999999866554 578999999998853
No 18
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.83 E-value=1.7e-08 Score=68.61 Aligned_cols=71 Identities=17% Similarity=0.064 Sum_probs=51.3
Q ss_pred CEEEEEecCCCCCCCC-------CHHHHHHHHhhC-CCCEEEEcCccCccEEE-ECCEEEEccCCcCCCCCCCCCCCceE
Q psy10860 16 QFRIGLCHGHDIIPWG-------DPEALALLQRQL-DVDILISGHTHKFEAYE-HENKFYINPGSATGAFNPLEPLNGRY 86 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~-------~~~~l~~~~~~~-~~dvvi~GHtH~~~~~~-~~~~~~iNPGS~~~~~~~~~~~~a~Y 86 (91)
...|+++|..+..... ..+.+.+++++. +++++++||+|.+.... .+++.++|.||+.... ...++|
T Consensus 221 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~~~~~~~~~----~~~~~y 296 (322)
T 2nxf_A 221 ERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETP----PHSHAF 296 (322)
T ss_dssp CEEEEEESSCCCTTSSCGGGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEECCCGGGCC----TTSCEE
T ss_pred CcEEEEEccCCCCCCCCccccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEEecchhhCC----CCCCcE
Confidence 4578999987753321 456677777666 68889999999998877 7788888777764321 236799
Q ss_pred EEee
Q psy10860 87 ANVK 90 (91)
Q Consensus 87 ~il~ 90 (91)
++++
T Consensus 297 ~~v~ 300 (322)
T 2nxf_A 297 ATAY 300 (322)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9886
No 19
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=98.81 E-value=2.5e-08 Score=71.76 Aligned_cols=68 Identities=15% Similarity=0.064 Sum_probs=51.2
Q ss_pred CEEEEEecCCCCCCC---------CCHHHHHHHHhhCCCCEEEEcCccCccEEEE---C--CEEEEccCCcCCCCCCCCC
Q psy10860 16 QFRIGLCHGHDIIPW---------GDPEALALLQRQLDVDILISGHTHKFEAYEH---E--NKFYINPGSATGAFNPLEP 81 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~---------~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~---~--~~~~iNPGS~~~~~~~~~~ 81 (91)
...|+++|+++.... ...+.+.+++++.++|++++||+|.+..... + +.+.+|+||++..
T Consensus 236 ~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~~------ 309 (443)
T 2xmo_A 236 AKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVF------ 309 (443)
T ss_dssp CEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTST------
T ss_pred CeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCccccC------
Confidence 356999999876421 2456777777788999999999999987654 2 3778999998752
Q ss_pred CCceEEEee
Q psy10860 82 LNGRYANVK 90 (91)
Q Consensus 82 ~~a~Y~il~ 90 (91)
.++|++++
T Consensus 310 -p~~y~il~ 317 (443)
T 2xmo_A 310 -PHKYGNIT 317 (443)
T ss_dssp -TCEEEEEE
T ss_pred -CCCeEEEE
Confidence 35888876
No 20
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.71 E-value=8.1e-09 Score=75.37 Aligned_cols=75 Identities=15% Similarity=0.041 Sum_probs=49.4
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEE----ECCEEEEccCCcCCCCCCCC-CCCceEEEe
Q psy10860 15 GQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYE----HENKFYINPGSATGAFNPLE-PLNGRYANV 89 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~----~~~~~~iNPGS~~~~~~~~~-~~~a~Y~il 89 (91)
+.++|++.|+........ ..+...+...++|++++||+|.+.... .++.+++||||......... ....+|+++
T Consensus 210 ~~~nIlvlH~~~~~~~~~-~yip~~l~~~~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lv 288 (417)
T 4fbw_A 210 EWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGIL 288 (417)
T ss_dssp TSEEEEEEESCSSCSSSS-SSCCGGGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEE
T ss_pred CceEEEEecCCccCCCCc-ccCchhHhhcCCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEE
Confidence 458999999865321110 011112335689999999999998764 36889999999876643210 125688888
Q ss_pred e
Q psy10860 90 K 90 (91)
Q Consensus 90 ~ 90 (91)
+
T Consensus 289 e 289 (417)
T 4fbw_A 289 N 289 (417)
T ss_dssp E
T ss_pred E
Confidence 6
No 21
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.71 E-value=1e-08 Score=75.92 Aligned_cols=75 Identities=15% Similarity=0.041 Sum_probs=49.1
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEE----ECCEEEEccCCcCCCCCCCC-CCCceEEEe
Q psy10860 15 GQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYE----HENKFYINPGSATGAFNPLE-PLNGRYANV 89 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~----~~~~~~iNPGS~~~~~~~~~-~~~a~Y~il 89 (91)
+.++|+++|+........ ..+...+...++|++++||+|.+.... .++.+++||||......... ....+|+|+
T Consensus 273 ~~~nIlvlH~~~~~~~~~-~yipe~ll~~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lv 351 (472)
T 4fbk_A 273 EWFNLLTVHQNHSAHTPT-SYLPESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGIL 351 (472)
T ss_dssp GEEEEEEEESCSCCSSTT-SSCCGGGSCTTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEE
T ss_pred CceEEEEecCCccCCCcc-ccCChhhhhcCCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCCCCCEEEEE
Confidence 347999999976432110 111112335689999999999998764 26889999999865533211 125688888
Q ss_pred e
Q psy10860 90 K 90 (91)
Q Consensus 90 ~ 90 (91)
+
T Consensus 352 e 352 (472)
T 4fbk_A 352 N 352 (472)
T ss_dssp E
T ss_pred E
Confidence 6
No 22
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.68 E-value=2.3e-08 Score=70.05 Aligned_cols=75 Identities=21% Similarity=0.056 Sum_probs=47.7
Q ss_pred CCEEEEEecCCCCCCCCC-HHH------HHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCceEE
Q psy10860 15 GQFRIGLCHGHDIIPWGD-PEA------LALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGRYA 87 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~~~-~~~------l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~Y~ 87 (91)
+..+|+++|+.......+ .+. +...+...++|++++||+|.+..... +..++||||......+......+|+
T Consensus 184 ~~~~Ill~H~~~~~~~~~~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-~~~i~y~GS~~~~s~~e~~~~~~~~ 262 (336)
T 2q8u_A 184 EDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQK-QPLTIYPGSLIRIDFGEEADEKGAV 262 (336)
T ss_dssp SSEEEEEEESEETTCC--------CCCEECGGGSCTTSSEEEEESCSSCEEEEE-TTEEEECCCSSCCSGGGTTCCCEEE
T ss_pred CCCEEEEECccccCCCCCCCccchhhcccCHHHccccCCEEEEccccCceEeCC-CccEEECCCCcCCCccccCCCCEEE
Confidence 567899999987543211 111 11112235899999999999987653 4578999998554322222357899
Q ss_pred Eee
Q psy10860 88 NVK 90 (91)
Q Consensus 88 il~ 90 (91)
+++
T Consensus 263 lv~ 265 (336)
T 2q8u_A 263 FVE 265 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 23
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.67 E-value=5.2e-09 Score=74.89 Aligned_cols=75 Identities=16% Similarity=-0.040 Sum_probs=46.8
Q ss_pred CCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCC-CCCCCC---CCceEEEee
Q psy10860 15 GQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA-FNPLEP---LNGRYANVK 90 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~-~~~~~~---~~a~Y~il~ 90 (91)
++.+|+++|++..........+. ...-.++|++++||+|.+.....++.+++||||+... +..... ...+|++++
T Consensus 170 ~~~~Ill~H~~~~~~~~~~~~~~-~~~l~~~d~v~~GH~H~~~~~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~ 248 (386)
T 3av0_A 170 YKKKILMLHQGINPYIPLDYELE-HFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVD 248 (386)
T ss_dssp CSSEEEEECCCCTTTSSSSCSSC-GGGSCCCSEEEECSCCSCEEEECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEE
T ss_pred CCCEEEEECcCccccCCCCcccC-HHHhhhCCeEEccCCCCCccccCCCceEEECCcccccCcchhccccCCCCEEEEEE
Confidence 46789999998742111000010 0011248999999999996555688899999998554 322100 246888876
No 24
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.58 E-value=1.6e-08 Score=74.16 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=47.3
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEEE----ECCEEEEccCCcCCCCCCCC-CCCceEEEee
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAYE----HENKFYINPGSATGAFNPLE-PLNGRYANVK 90 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~~----~~~~~~iNPGS~~~~~~~~~-~~~a~Y~il~ 90 (91)
.++|+++|+..... ...+.+...+...++|++++||+|.+.... .++.+++||||......... ....+|++++
T Consensus 230 ~~~Ilv~H~~~~~~-g~~~~ip~~l~~~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lve 308 (431)
T 3t1i_A 230 WFNLFVIHQNRSKH-GSTNFIPEQFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLR 308 (431)
T ss_dssp EEEEEEECSCCSCS-SSSSSCCGGGSCTTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEE
T ss_pred ceEEEEECCCccCC-CccccCCHhHhhCCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEE
Confidence 37899999964211 011111112234578999999999998765 25789999999877533210 1134888886
No 25
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.41 E-value=4.9e-07 Score=64.63 Aligned_cols=75 Identities=23% Similarity=0.094 Sum_probs=46.0
Q ss_pred CCEEEEEecCCCCCCCC--CHHH-----HHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCceEE
Q psy10860 15 GQFRIGLCHGHDIIPWG--DPEA-----LALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGRYA 87 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~~~~--~~~~-----l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~Y~ 87 (91)
+..+|++.|+....... ..++ +...+...++|++++||+|++.... ++..++||||......+......+|+
T Consensus 166 ~~~~I~l~H~~v~g~~~~~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~~-~~~~i~y~GS~~~~~f~E~~~~k~~~ 244 (379)
T 3tho_B 166 EDFAIFMGHFTVEGLAGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQ-KQPLTIYPGSLIRIDFGEEADEKGAV 244 (379)
T ss_dssp SSEEEEEEESCBSCCCC-------CSCCBCGGGSCTTSSEEEEESCSSCEEEE-ETTEEEECCCSSCCSGGGSSSCCEEE
T ss_pred CCCeEEEEeccccCCccCCCCccccccccCHHHcCcCCCEEEcccccCCeEeC-CCCcEEecCCCCCCCcccccCCCEEE
Confidence 56789999987653221 1111 1111223579999999999995443 33589999998544332222246888
Q ss_pred Eee
Q psy10860 88 NVK 90 (91)
Q Consensus 88 il~ 90 (91)
+++
T Consensus 245 lv~ 247 (379)
T 3tho_B 245 FVE 247 (379)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 26
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=98.28 E-value=5.5e-07 Score=61.53 Aligned_cols=30 Identities=10% Similarity=0.097 Sum_probs=26.4
Q ss_pred CCCEEEEcCccCccEEEEC--CEEEEccCCcC
Q psy10860 44 DVDILISGHTHKFEAYEHE--NKFYINPGSAT 73 (91)
Q Consensus 44 ~~dvvi~GHtH~~~~~~~~--~~~~iNPGS~~ 73 (91)
++++|||||||.+.....+ +++.||||++.
T Consensus 196 g~~~vvfGHt~~~~~~~~~~~~~i~IDtG~~~ 227 (262)
T 2qjc_A 196 GPETVVFGHDARRGLQEQYKPLAIGLDSRCVY 227 (262)
T ss_dssp CSSEEEECCCGGGCCBCTTTTTEEECCCBGGG
T ss_pred CCCEEEECCCccccccccCCCCEEEeeCcccc
Confidence 4789999999998777777 89999999985
No 27
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=98.25 E-value=1.1e-05 Score=57.36 Aligned_cols=61 Identities=25% Similarity=0.229 Sum_probs=47.4
Q ss_pred CEEEEEecCCCCCCC--CC----HHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCCC
Q psy10860 16 QFRIGLCHGHDIIPW--GD----PEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGAF 76 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~--~~----~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~ 76 (91)
..+|++.|.+++... .+ .+.+..++++.++|++++||+|.......+++.+|+.|+.|...
T Consensus 191 ~~~IV~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~g~~~iv~Ga~g~~~ 257 (342)
T 3tgh_A 191 DFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDNDMAHITCGSGSMSQ 257 (342)
T ss_dssp SEEEEECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEETTEEEEEECCSSCCC
T ss_pred CcEEEEECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEeeCCcEEEEeCcccccc
Confidence 578999998876432 12 23455677788999999999999887778899999999987654
No 28
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=97.93 E-value=1.1e-05 Score=59.82 Aligned_cols=59 Identities=24% Similarity=0.255 Sum_probs=41.1
Q ss_pred CEEEEEecCCCCCCC---------CC---HHHHHHHHhhCCCCEEEEcCccCccEEEECCEEEEccCCcCCC
Q psy10860 16 QFRIGLCHGHDIIPW---------GD---PEALALLQRQLDVDILISGHTHKFEAYEHENKFYINPGSATGA 75 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~---------~~---~~~l~~~~~~~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~ 75 (91)
+.-|+++|....... .. ..++.+.. +.++|+||.||||.+.....+++++++||+-|.-
T Consensus 200 D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIlgGHtH~~~~~~v~~~~ivqag~~g~~ 270 (527)
T 3qfk_A 200 DIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAF-SKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTT 270 (527)
T ss_dssp SEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEECCSSCCEEEEEETTEEEEEECSTTSE
T ss_pred CEEEEEeCcCcccccccCccccccccchHHHHHHHhc-CCCCcEEEECCCCcccceEECCEEEeccChhhCE
Confidence 567899996542110 01 11333222 2589999999999988888899999999997764
No 29
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=97.87 E-value=3.5e-05 Score=56.83 Aligned_cols=60 Identities=8% Similarity=0.039 Sum_probs=40.0
Q ss_pred CEEEEEecCCCCCC-----C-CCHHHHHHHHhhCCCCEEEEcCccCccEE-------------------EECCEEEEccC
Q psy10860 16 QFRIGLCHGHDIIP-----W-GDPEALALLQRQLDVDILISGHTHKFEAY-------------------EHENKFYINPG 70 (91)
Q Consensus 16 g~~i~~~Hg~~~~~-----~-~~~~~l~~~~~~~~~dvvi~GHtH~~~~~-------------------~~~~~~~iNPG 70 (91)
+..|+++|...... . .....+.+.....++|++|+||||..... ..+++++++||
T Consensus 185 d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ag 264 (516)
T 1hp1_A 185 DIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAH 264 (516)
T ss_dssp SEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCCEEETTEECSSCCTTSCCCCEEETTEEEECBC
T ss_pred CEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCcccccCCccccccccCCCccccccCCCCcEEEecC
Confidence 57899999765311 0 12233433333334999999999997543 45789999999
Q ss_pred CcCCC
Q psy10860 71 SATGA 75 (91)
Q Consensus 71 S~~~~ 75 (91)
+.|.-
T Consensus 265 ~~g~~ 269 (516)
T 1hp1_A 265 EWGKY 269 (516)
T ss_dssp STTSE
T ss_pred hhhhc
Confidence 97753
No 30
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=97.83 E-value=2.9e-05 Score=54.22 Aligned_cols=31 Identities=23% Similarity=0.157 Sum_probs=27.7
Q ss_pred CCCEEEEcCccCccEEEECCEEEEccCCcCC
Q psy10860 44 DVDILISGHTHKFEAYEHENKFYINPGSATG 74 (91)
Q Consensus 44 ~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~ 74 (91)
++|++++||+|.+.....++..++||||...
T Consensus 198 ~~dyvalGH~H~~q~~~~~~~~i~ypGS~~~ 228 (333)
T 1ii7_A 198 GYLYYALGHIHKRYETSYSGSPVVYPGSLER 228 (333)
T ss_dssp TCSEEEEESCSSCEEEEETTEEEEECCCSSC
T ss_pred cCCEEEccccccceecCCCCceEEEcCCCee
Confidence 6899999999999877678899999999864
No 31
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=97.61 E-value=0.00013 Score=52.31 Aligned_cols=59 Identities=25% Similarity=0.358 Sum_probs=41.1
Q ss_pred EEEEEecCCCCCCCC-----C---HHHHHHHHhhCCCCEEEEcCccCccEEE-------------------ECCEEEEcc
Q psy10860 17 FRIGLCHGHDIIPWG-----D---PEALALLQRQLDVDILISGHTHKFEAYE-------------------HENKFYINP 69 (91)
Q Consensus 17 ~~i~~~Hg~~~~~~~-----~---~~~l~~~~~~~~~dvvi~GHtH~~~~~~-------------------~~~~~~iNP 69 (91)
++|++.|..++.... . .+.+..++++.++|++++||+|...... .+++++|..
T Consensus 279 w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~ 358 (426)
T 1xzw_A 279 WLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITI 358 (426)
T ss_dssp EEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEE
T ss_pred EEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEe
Confidence 688999987654321 1 2345556677899999999999954321 247788998
Q ss_pred CCcCCC
Q psy10860 70 GSATGA 75 (91)
Q Consensus 70 GS~~~~ 75 (91)
|+.|..
T Consensus 359 G~gG~~ 364 (426)
T 1xzw_A 359 GDGGNS 364 (426)
T ss_dssp CCSCCT
T ss_pred CCCccc
Confidence 987754
No 32
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=97.34 E-value=0.00086 Score=50.31 Aligned_cols=52 Identities=21% Similarity=0.342 Sum_probs=37.6
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHhh-CCCCEEEEcCccCccE--EEECCEEEEccCCcCC
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQRQ-LDVDILISGHTHKFEA--YEHENKFYINPGSATG 74 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~~-~~~dvvi~GHtH~~~~--~~~~~~~~iNPGS~~~ 74 (91)
+..|+++|... +.-.+++++ .++|++|.||||.... ...++++++++|+-|.
T Consensus 256 d~iIvLsH~g~-------~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~t~vvqag~~g~ 310 (562)
T 2wdc_A 256 NAVVLLSHNGM-------QLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGK 310 (562)
T ss_dssp SEEEEEECSCH-------HHHHHHHTTSSSCCEEEECSSCCCCSSCEEETTEEEEECCSTTC
T ss_pred CEEEEEeCCCC-------cchHHHHhcCCCCcEEEeCCCCCCCccCEEECCEEEEecCcccc
Confidence 46799999642 111234444 5899999999999653 3458999999999775
No 33
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=97.19 E-value=0.0013 Score=47.04 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=27.9
Q ss_pred EEEEEecCCCCCCC----CC----HHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 17 FRIGLCHGHDIIPW----GD----PEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 17 ~~i~~~Hg~~~~~~----~~----~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
++|++.|...+... .+ .+.+..++++.++|++++||+|..
T Consensus 272 ~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 319 (424)
T 2qfp_A 272 WLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319 (424)
T ss_dssp EEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSE
T ss_pred EEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhh
Confidence 67888887665421 11 134555667789999999999994
No 34
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.07 E-value=0.0022 Score=47.38 Aligned_cols=61 Identities=21% Similarity=0.193 Sum_probs=38.8
Q ss_pred CCEEEEEecCCCCC-CC--C------CHHHHHHHHhh-CCCCEEEEcCccCcc--EEEECCEEEEccCCcCCC
Q psy10860 15 GQFRIGLCHGHDII-PW--G------DPEALALLQRQ-LDVDILISGHTHKFE--AYEHENKFYINPGSATGA 75 (91)
Q Consensus 15 ~g~~i~~~Hg~~~~-~~--~------~~~~l~~~~~~-~~~dvvi~GHtH~~~--~~~~~~~~~iNPGS~~~~ 75 (91)
.+.-|+++|..... .. . ....-.++++. .++|++|.||||... ....++++++.+|+-|.-
T Consensus 186 ~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~ivqag~~g~~ 258 (509)
T 3ive_A 186 VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGID 258 (509)
T ss_dssp CSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHCSSCCEEEEESSCCCCSSCEEETTEEEECCCSTTSE
T ss_pred CCEEEEEeccCcCCccccccccccccccchHHHHHhcCCCCcEEEeCCcCccCCCCeeeCCEEEEecChhhce
Confidence 34678999965311 10 0 01111223332 579999999999854 346799999999997753
No 35
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.02 E-value=0.001 Score=47.02 Aligned_cols=58 Identities=22% Similarity=0.138 Sum_probs=38.0
Q ss_pred CEEEEEecCCCCCCC------CCHHHHHHHHhhCCCCEEEEcCccCccEE--------------EECCEEEEccCCcCCC
Q psy10860 16 QFRIGLCHGHDIIPW------GDPEALALLQRQLDVDILISGHTHKFEAY--------------EHENKFYINPGSATGA 75 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~------~~~~~l~~~~~~~~~dvvi~GHtH~~~~~--------------~~~~~~~iNPGS~~~~ 75 (91)
+.-|+++|....... .....+.+ +-.++|+||.||||..+.. ..++++++.||+-|.-
T Consensus 209 D~II~l~H~G~~~d~~~~~~e~~~~~lA~--~v~giD~IigGHsH~~~~~~~~~~~~~~~~~~g~v~~~~vvqag~~g~~ 286 (341)
T 3gve_A 209 DVIIALAHTGIEKQAQSSGAENAVFDLAT--KTKGIDAIISGHQHGLFPSAEYAGVAQFNVEKGTINGIPVVMPSSWGKY 286 (341)
T ss_dssp SEEEEEECCCCCSSCCCTTCSSCHHHHHH--HCSCCCEEEECSSCCEESCGGGTTSTTEETTTTEETTEEEEEECSTTSE
T ss_pred CEEEEEeccCccccccccccchhHHHHHh--cCCCCcEEEECCCCccCCCcccccccccccccccCCCEEEEeCChhhcE
Confidence 466899997653211 11112332 2368999999999996421 3578999999998764
No 36
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.02 E-value=0.00078 Score=47.72 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=38.0
Q ss_pred CEEEEEecCCCCCCCC---CHHHHHHHHhhCCCCEEEEcCccCccEE--------------EECCEEEEccCCcCCC
Q psy10860 16 QFRIGLCHGHDIIPWG---DPEALALLQRQLDVDILISGHTHKFEAY--------------EHENKFYINPGSATGA 75 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~---~~~~l~~~~~~~~~dvvi~GHtH~~~~~--------------~~~~~~~iNPGS~~~~ 75 (91)
+.-|+++|........ .........+..++|+||.||||..... ..++++++.||+-|.-
T Consensus 203 D~II~l~H~G~~~d~~~~~~en~~~~~~~v~gID~IlgGHsH~~~~~~~~~~~~g~~~~~g~vn~v~vvqag~~G~~ 279 (339)
T 3jyf_A 203 DVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGDH 279 (339)
T ss_dssp SEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSCSEESSGGGTTSTTEETTTTEETTEEEEEECSTTSE
T ss_pred CEEEEEeccCccccccccccchhHHHHhhCCCCCEEEeCCCccccccccccccCCccccCccCCCEEEEcCCccccc
Confidence 4568999976531110 0000111234568999999999996421 3568999999998764
No 37
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=96.71 E-value=0.0035 Score=47.03 Aligned_cols=53 Identities=21% Similarity=0.298 Sum_probs=34.5
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHh-hCCCCEEEEcCccCccE----------------EEECC-----EEEEccCCcC
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQR-QLDVDILISGHTHKFEA----------------YEHEN-----KFYINPGSAT 73 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~-~~~~dvvi~GHtH~~~~----------------~~~~~-----~~~iNPGS~~ 73 (91)
+.-|+++|... +.-.++++ -.++|+||.||||.... ..+.+ ++++.+|+-|
T Consensus 196 d~iI~l~H~G~-------~~d~~la~~~~giDlIlgGHtH~~~~~~~~~~~~~~~~~~~p~~v~~~~G~~~~ivqag~~g 268 (579)
T 3ztv_A 196 NKIILLSHAGS-------EKNIEIAQKVNDIDVIVTGDSHYLYGNDELRSLKLPVIYEYPLEFKNPNGEPVFVMEGWAYS 268 (579)
T ss_dssp CCEEEEEETCH-------HHHHHHHHHCSSCCEEEECSSCCEEECHHHHHTTCCEEEESSEEEECTTSCEEEEEEBCSTT
T ss_pred CEEEEEeccCc-------hhhHHHHHhCCCCCEEEeCCCCccccCccccccCccccCCCceEEeCCCCCEEEEEecChHH
Confidence 34688999643 11122332 24799999999999763 23333 7889999876
Q ss_pred CC
Q psy10860 74 GA 75 (91)
Q Consensus 74 ~~ 75 (91)
.-
T Consensus 269 ~~ 270 (579)
T 3ztv_A 269 AV 270 (579)
T ss_dssp CE
T ss_pred he
Confidence 53
No 38
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=96.48 E-value=0.0064 Score=45.26 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=35.1
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHhh-CCCCEEEEcCccCccEE--------------EE-----CCEEEEccCCcCCC
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQRQ-LDVDILISGHTHKFEAY--------------EH-----ENKFYINPGSATGA 75 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~~-~~~dvvi~GHtH~~~~~--------------~~-----~~~~~iNPGS~~~~ 75 (91)
+..|+++|... +.-.++++. .++|++|.||||..... .+ ++++++.+|+-|.-
T Consensus 208 d~iIvL~H~g~-------~~d~~la~~~~gvDlIlgGHtH~~~~~~~~~~~~~~g~~p~~v~~~~g~~~~ivqag~~g~~ 280 (552)
T 2z1a_A 208 NKIVVLSHLGY-------GEDLKLARRLVGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKV 280 (552)
T ss_dssp CCEEEEEESCH-------HHHHHHHTTCSSCCEEEECSSCCCBSCCSCTTCCCSBCSSEEEECTTSCEEEEEECCSTTSE
T ss_pred CEEEEEeCCCc-------chHHHHHHhCCCccEEEeCCcCccccCCCCccccccCCCceeEecCCCCEEEEEecChhhcE
Confidence 46789999642 111234443 68999999999986531 11 25788999987653
No 39
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.011 Score=43.75 Aligned_cols=44 Identities=30% Similarity=0.350 Sum_probs=37.5
Q ss_pred CCCCEEEEcCccCccEEEECCEEEEccCCcCCCCCCCCCCCceEEEee
Q psy10860 43 LDVDILISGHTHKFEAYEHENKFYINPGSATGAFNPLEPLNGRYANVK 90 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~~~~~~~~iNPGS~~~~~~~~~~~~a~Y~il~ 90 (91)
.-+|++|..=--.++...+++.++||||++..++.+ ..+||.+.
T Consensus 381 ~~PDilI~PS~l~~F~kvv~~~v~INPG~l~k~~~g----~GTya~l~ 424 (460)
T 3flo_A 381 FSPDIMIIPSELQHFARVVQNVVVINPGRFIRATGN----RGSYAQIT 424 (460)
T ss_dssp CCCSEEECCCSSCCEEEEETTEEEEECCCSBCTTSC----BCEEEEEE
T ss_pred CCCCEEEcCCCCcCceEEeCCEEEECcccccCCCCC----CceeEEEE
Confidence 468999999999999999999999999999988654 45888764
No 40
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=96.16 E-value=0.015 Score=43.64 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=37.3
Q ss_pred CEEEEEecCCCCCCCCCH-HHHHHHHhh-CCCCE-EEEcCccCccEE-EECCEEEEccCCcCC
Q psy10860 16 QFRIGLCHGHDIIPWGDP-EALALLQRQ-LDVDI-LISGHTHKFEAY-EHENKFYINPGSATG 74 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~-~~l~~~~~~-~~~dv-vi~GHtH~~~~~-~~~~~~~iNPGS~~~ 74 (91)
+.-|+++|.......... ...+++++. .++|+ ||.||||..... ..++++++.+|+-+.
T Consensus 199 D~IIvL~H~G~~~~~d~~~~~~~~lA~~~~giDilIlgGHtH~~~~~~~~~~t~ivqaG~~g~ 261 (557)
T 3c9f_A 199 DLIIIVGHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVFDSLSTGLQSGRYCE 261 (557)
T ss_dssp SEEEEECSSCCCTTTCHHHHHHHHHHHHCTTSEEEEEECSSCCEEEEEEETTEEEEEECSTTS
T ss_pred CEEEEecccCccccCccccHHHHHHHHhCCCCCEEEECCCCCCCCcceecCCeEeeeccchhc
Confidence 567899997642011111 111233333 58895 999999997543 347899999998765
No 41
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=96.02 E-value=0.016 Score=43.15 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=33.8
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHhh-CCCCEEEEcCccCccE---------------EEE-----CCEEEEccCCcCC
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQRQ-LDVDILISGHTHKFEA---------------YEH-----ENKFYINPGSATG 74 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~~-~~~dvvi~GHtH~~~~---------------~~~-----~~~~~iNPGS~~~ 74 (91)
+.-|+++|... +.-.++++. .++|+||.||||.... ..+ .+++++.+|+-|.
T Consensus 210 D~iI~l~H~g~-------~~d~~la~~~~giDlIlgGHtH~~~~~g~~~~~~~~~g~yp~~v~~~~G~~~~ivqag~~g~ 282 (546)
T 4h2g_A 210 NKIIALGHSGF-------EMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGK 282 (546)
T ss_dssp CCEEEEEESCH-------HHHHHHHHHSTTCCEEECCSSCCCCCSSSCSSSCCCSSCSSEEEECTTSCEEEEECCCSTTS
T ss_pred CEEEEEeccCc-------cchHHHHHhCCCCcEEEeCCcCcccccCCCCcccccCCCcceEEecCCCCEEEEEecChhhc
Confidence 45789999643 111222322 4799999999998641 111 2478899998765
Q ss_pred C
Q psy10860 75 A 75 (91)
Q Consensus 75 ~ 75 (91)
-
T Consensus 283 ~ 283 (546)
T 4h2g_A 283 Y 283 (546)
T ss_dssp E
T ss_pred E
Confidence 3
No 42
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=95.70 E-value=0.032 Score=39.21 Aligned_cols=40 Identities=13% Similarity=0.267 Sum_probs=29.5
Q ss_pred HHHHHHHhhCCCCEEEEcCccCccEEEE--CCEEEEccCCcC
Q psy10860 34 EALALLQRQLDVDILISGHTHKFEAYEH--ENKFYINPGSAT 73 (91)
Q Consensus 34 ~~l~~~~~~~~~dvvi~GHtH~~~~~~~--~~~~~iNPGS~~ 73 (91)
+.+.++++..+.++||+||||.+..... +.++.|+.|+.-
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~~~~~~~~~~i~Idsg~~~ 309 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKV 309 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSSCEEETTTTEEECCCCGGG
T ss_pred HHHHHHHHHCCCcEEEECCCcccchhhhcCCCEEEEECCCCC
Confidence 4455566667889999999999875432 456779999865
No 43
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=95.18 E-value=0.033 Score=38.07 Aligned_cols=47 Identities=19% Similarity=0.069 Sum_probs=29.5
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHh--hCCCCEEEEcCccCccEEE-E--CCEEEEc
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQR--QLDVDILISGHTHKFEAYE-H--ENKFYIN 68 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~--~~~~dvvi~GHtH~~~~~~-~--~~~~~iN 68 (91)
+.-|+.+|+.. +.+. ..++. +.++|+|+-||||.+.... . +++.++.
T Consensus 141 d~IIv~~H~e~-----t~Ek-~~la~~~dg~vd~VvGgHTHv~~~d~~il~~gt~~i~ 192 (255)
T 1t70_A 141 GTVFVDFHAEA-----TSEK-EAMGWHLAGRVAAVIGTHTHVPTADTRILKGGTAYQT 192 (255)
T ss_dssp CEEEEEEECSC-----HHHH-HHHHHHHTTSSSEEEEESSCSCBSCCEEETTTEEEES
T ss_pred CEEEEEeCCCC-----hHHH-HHHHHhCCCCeEEEEeCCCCcCCCceEEcCCCeEEEE
Confidence 45677788643 2221 22332 3359999999999986533 2 8877765
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=95.08 E-value=0.018 Score=42.55 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=33.6
Q ss_pred CEEEEEecCCCCCCCCCHHHHHHHHh-hCCCCEEEEcCccCccE-----------------EEE---CCEEEEccCCcCC
Q psy10860 16 QFRIGLCHGHDIIPWGDPEALALLQR-QLDVDILISGHTHKFEA-----------------YEH---ENKFYINPGSATG 74 (91)
Q Consensus 16 g~~i~~~Hg~~~~~~~~~~~l~~~~~-~~~~dvvi~GHtH~~~~-----------------~~~---~~~~~iNPGS~~~ 74 (91)
+.-|+++|... +.-.++++ -.++|+|+.||||.... ... ++++++.+|+-|.
T Consensus 188 D~II~LsH~G~-------~~d~~la~~v~giD~IlgGHsH~~~~~~~~~~~~~~~g~~~~~v~~~~g~~v~ivqag~~g~ 260 (530)
T 4h1s_A 188 NKIIALGHSGF-------EMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGK 260 (530)
T ss_dssp CCEEEEEESCH-------HHHHHHHHHSTTCCEEECCSSCCCBCSSSCSSSCCCSBCSSEEEECTTSCEEEEECCCSTTS
T ss_pred CEEEEeccCCc-------hHHHHHHhcCCCCCeeccCCccceeeccCCccccccCCCCCEEEECCCCCEEEEEecCcccc
Confidence 34588999643 11122333 35899999999997431 111 3578899998775
Q ss_pred C
Q psy10860 75 A 75 (91)
Q Consensus 75 ~ 75 (91)
-
T Consensus 261 ~ 261 (530)
T 4h1s_A 261 Y 261 (530)
T ss_dssp E
T ss_pred c
Confidence 3
No 45
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=94.65 E-value=0.072 Score=38.55 Aligned_cols=28 Identities=29% Similarity=0.504 Sum_probs=22.8
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCccEEE
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFEAYE 60 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~~~~ 60 (91)
.+.+.++++..+.++||.||++.+.-.+
T Consensus 386 ~~~~~~fl~~~~~~~iir~H~~~~~g~~ 413 (477)
T 1wao_1 386 PDVTKAFLEENNLDYIIRSHEVKAEGYE 413 (477)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCTEEEE
T ss_pred HHHHHHHHHHcCCeEEEECCCCCcCCeE
Confidence 3567778888999999999999986444
No 46
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=94.64 E-value=0.039 Score=38.25 Aligned_cols=26 Identities=27% Similarity=0.184 Sum_probs=19.5
Q ss_pred CCCCEEEEcCccCccEEE-E--CCEEEEc
Q psy10860 43 LDVDILISGHTHKFEAYE-H--ENKFYIN 68 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~~-~--~~~~~iN 68 (91)
.++|+|+-||||.+.... . +++.++.
T Consensus 174 g~VD~VvGgHTHv~t~d~~il~~gt~~i~ 202 (281)
T 1t71_A 174 GYVTTIFGTHTHVPSADLRITPKGSAYIT 202 (281)
T ss_dssp TTSSEEEEESSSSCCTTCEECTTSCEEES
T ss_pred CCeEEEEeCCCCcCCCceEEecCCcEEEe
Confidence 359999999999986432 2 6777765
No 47
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=92.78 E-value=0.099 Score=35.69 Aligned_cols=26 Identities=15% Similarity=0.157 Sum_probs=18.8
Q ss_pred CCCCEEEEcCccCccEEE--E-CCEEEEc
Q psy10860 43 LDVDILISGHTHKFEAYE--H-ENKFYIN 68 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~~--~-~~~~~iN 68 (91)
.++|+||-||||.+.... . +++.++.
T Consensus 161 g~Vd~VvGgHTHv~t~d~~il~~gt~~it 189 (252)
T 2z06_A 161 GRASAVLGTHTHVPTLDATRLPKGTLYQT 189 (252)
T ss_dssp TTBSEEEEESSCSCBSCCEECTTSCEEES
T ss_pred CCeEEEEcCCCCcCCCccEEcCCCcEeec
Confidence 469999999999986432 2 6656554
No 48
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=81.92 E-value=4.8 Score=29.76 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=20.3
Q ss_pred HHHHHHHhhCCCC--EEEEcCccCccEEE
Q psy10860 34 EALALLQRQLDVD--ILISGHTHKFEAYE 60 (91)
Q Consensus 34 ~~l~~~~~~~~~d--vvi~GHtH~~~~~~ 60 (91)
++|..++++.+++ ++|+||.|......
T Consensus 360 ~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~ 388 (527)
T 2yeq_A 360 ERVINFIKSKNLNNVVVLTGDVHASWASN 388 (527)
T ss_dssp HHHHHHHHHTTCCCEEEEECSSSSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEcchHHHhHhh
Confidence 3566667777774 99999999987654
No 49
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=81.08 E-value=3.1 Score=28.26 Aligned_cols=28 Identities=18% Similarity=0.219 Sum_probs=18.7
Q ss_pred CCEEEEcCccCcc-EEEECCEEEEccCCc
Q psy10860 45 VDILISGHTHKFE-AYEHENKFYINPGSA 72 (91)
Q Consensus 45 ~dvvi~GHtH~~~-~~~~~~~~~iNPGS~ 72 (91)
...||||||=... ....++++-|--|.+
T Consensus 220 ~~~vv~GHt~~~~g~~~~~~~i~iDTG~v 248 (280)
T 2dfj_A 220 EYSIAFGHWASLEGKGTPEGIYALDTGCC 248 (280)
T ss_dssp TSEEEECCCGGGTTCSCCTTEEECCCCTT
T ss_pred CceEEECCcccccCccccCCEEEeecccc
Confidence 4589999997542 222366777887775
No 50
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=69.29 E-value=15 Score=25.46 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=21.4
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.+.+.++++..+.+.||=||+=.+.
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~v~~ 252 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQVVED 252 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCCTT
T ss_pred HHHHHHHHHHCCCeEEEEcCeeeec
Confidence 4677888899999999999998864
No 51
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=68.75 E-value=23 Score=24.60 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=32.9
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCcc-EEEE-CCEEEEccCCcCCCCCCCCCCCceEEEee
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFE-AYEH-ENKFYINPGSATGAFNPLEPLNGRYANVK 90 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~-~~~~-~~~~~iNPGS~~~~~~~~~~~~a~Y~il~ 90 (91)
.+.+.++++..+.+.||-||+-... ++.. +++ +|-.=|+....+ .-...++++.++
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~-~iTvfSapnY~~-~~~N~~a~~~~~ 290 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSAPNYCD-QMGNKASYIHLQ 290 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGT-EEEECCCTTGGG-TSCCCEEEEEEE
T ss_pred HHHHHHHHHHcCCcEEEEeceeecCCeEEecCCe-EEEEECCcccCC-CCCccEEEEEEE
Confidence 4567788888999999999998864 3322 333 233333332211 112467777664
No 52
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=65.42 E-value=13 Score=21.36 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=24.7
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 18 RIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 18 ~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
+..+..|++ .+.+.+.+++.++|++|.|...+.
T Consensus 90 ~~~~~~g~~------~~~I~~~a~~~~~dliV~G~~~~~ 122 (147)
T 3hgm_A 90 RAFVKGGRP------SRTIVRFARKRECDLVVIGAQGTN 122 (147)
T ss_dssp EEEEEESCH------HHHHHHHHHHTTCSEEEECSSCTT
T ss_pred EEEEecCCH------HHHHHHHHHHhCCCEEEEeCCCCc
Confidence 455666654 567778888899999999977654
No 53
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=65.03 E-value=19 Score=25.32 Aligned_cols=27 Identities=11% Similarity=0.240 Sum_probs=22.1
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCccEE
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFEAY 59 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~~~ 59 (91)
.+.+.++++..+.+.||=||+-...-.
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~~~Gy 263 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELRMGGV 263 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCCTEEE
T ss_pred HHHHHHHHHHCCCeEEEEcCceecCeE
Confidence 456788899999999999999886433
No 54
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=64.80 E-value=6.2 Score=26.30 Aligned_cols=32 Identities=9% Similarity=-0.049 Sum_probs=22.8
Q ss_pred HhhCCCCEEEEcCccCccEEEE----CCEEEEccCC
Q psy10860 40 QRQLDVDILISGHTHKFEAYEH----ENKFYINPGS 71 (91)
Q Consensus 40 ~~~~~~dvvi~GHtH~~~~~~~----~~~~~iNPGS 71 (91)
.++.++|.||.|.||.|..... -++.+|+|+.
T Consensus 170 ~~~~gad~IVLGCTh~p~l~~~i~~~~gVpvID~~~ 205 (245)
T 3qvl_A 170 LKEDGSGAIVLGSGGMATLAQQLTRELRVPVIDGVS 205 (245)
T ss_dssp HHHSCCSEEEECCGGGGGGHHHHHHHHTSCEECHHH
T ss_pred HHhcCCCEEEECCCChHHHHHHHHHHcCCeEEccHH
Confidence 3457899999999999975421 1466777654
No 55
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=61.96 E-value=3.5 Score=30.07 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=10.6
Q ss_pred cCccCccEEEECC-EEEEccCCcCCC
Q psy10860 51 GHTHKFEAYEHEN-KFYINPGSATGA 75 (91)
Q Consensus 51 GHtH~~~~~~~~~-~~~iNPGS~~~~ 75 (91)
+|+|--....... +++|||||-+.-
T Consensus 7 ~~~~gm~~~Ms~klILviN~GSSS~K 32 (415)
T 3sk3_A 7 HHHHGMASHMSSKLVLVLNCGSSSLK 32 (415)
T ss_dssp -----------CCEEEEEEECSSCEE
T ss_pred cccccccccCCCCeEEEEeCchHhhh
Confidence 5555543333444 688999997754
No 56
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=60.63 E-value=15 Score=21.08 Aligned_cols=31 Identities=16% Similarity=0.355 Sum_probs=23.8
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCcc
Q psy10860 18 RIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 18 ~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH 54 (91)
+..+..|++ .+.+.+.+++.++|++|.|..+
T Consensus 86 ~~~~~~g~~------~~~I~~~a~~~~~dliV~G~~~ 116 (143)
T 3fdx_A 86 HFHVAEGSP------KDKILALAKSLPADLVIIASHR 116 (143)
T ss_dssp EEEEEESCH------HHHHHHHHHHTTCSEEEEESSC
T ss_pred EEEEEecCh------HHHHHHHHHHhCCCEEEEeCCC
Confidence 455666754 5677888888999999999874
No 57
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=60.05 E-value=14 Score=21.77 Aligned_cols=32 Identities=25% Similarity=0.251 Sum_probs=23.7
Q ss_pred EEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 19 IGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 19 i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
..+..|++ .+.+.+.+++.++|+||.|...+.
T Consensus 101 ~~v~~G~~------~~~I~~~a~~~~~dlIV~G~~g~~ 132 (162)
T 1mjh_A 101 DIIVVGIP------HEEIVKIAEDEGVDIIIMGSHGKT 132 (162)
T ss_dssp EEEEEECH------HHHHHHHHHHTTCSEEEEESCCSS
T ss_pred EEEcCCCH------HHHHHHHHHHcCCCEEEEcCCCCC
Confidence 44556654 567778888899999999976553
No 58
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=58.28 E-value=15 Score=21.08 Aligned_cols=24 Identities=21% Similarity=0.232 Sum_probs=19.5
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 33 PEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
.+.+.+.+++.++|+||.|...+.
T Consensus 88 ~~~I~~~a~~~~~dliV~G~~~~~ 111 (137)
T 2z08_A 88 AEAILQAARAEKADLIVMGTRGLG 111 (137)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTT
T ss_pred HHHHHHHHHHcCCCEEEECCCCCc
Confidence 567778888899999999977654
No 59
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=55.51 E-value=16 Score=21.05 Aligned_cols=33 Identities=12% Similarity=0.270 Sum_probs=24.0
Q ss_pred EEEEecCCCCCCCCCHHHHHH-HHhhCCCCEEEEcCccCc
Q psy10860 18 RIGLCHGHDIIPWGDPEALAL-LQRQLDVDILISGHTHKF 56 (91)
Q Consensus 18 ~i~~~Hg~~~~~~~~~~~l~~-~~~~~~~dvvi~GHtH~~ 56 (91)
+..+..|++ .+.+.+ .+++.++|++|.|.....
T Consensus 87 ~~~~~~g~~------~~~I~~~~a~~~~~dliV~G~~~~~ 120 (146)
T 3s3t_A 87 KTEISYGIP------KHTIEDYAKQHPEIDLIVLGATGTN 120 (146)
T ss_dssp EEEEEEECH------HHHHHHHHHHSTTCCEEEEESCCSS
T ss_pred EEEEecCCh------HHHHHHHHHhhcCCCEEEECCCCCC
Confidence 445566654 466777 888899999999976553
No 60
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=54.80 E-value=11 Score=25.35 Aligned_cols=32 Identities=31% Similarity=0.325 Sum_probs=24.1
Q ss_pred hhCCCCEEEEcCccCccEEEE------CCEEEEccCCc
Q psy10860 41 RQLDVDILISGHTHKFEAYEH------ENKFYINPGSA 72 (91)
Q Consensus 41 ~~~~~dvvi~GHtH~~~~~~~------~~~~~iNPGS~ 72 (91)
.+.++|.+|.|.||.|..... .++.+|+|+..
T Consensus 174 ~~~~~D~iVLGCTh~pll~~~i~~~~~~~v~vIDs~~~ 211 (272)
T 1zuw_A 174 KDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDE 211 (272)
T ss_dssp HHSCCSEEEEESTTGGGGHHHHHHHHCTTSEEEEHHHH
T ss_pred HhcCCCEEEECccCHHHHHHHHHHHcCCCCeEECcHHH
Confidence 346899999999999976431 26788888753
No 61
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=54.69 E-value=18 Score=26.81 Aligned_cols=17 Identities=18% Similarity=0.149 Sum_probs=14.3
Q ss_pred EEEEECCEEEEEecCCC
Q psy10860 10 KVVTVGQFRIGLCHGHD 26 (91)
Q Consensus 10 ~~~~~~g~~i~~~Hg~~ 26 (91)
..++++|.+|+.+||..
T Consensus 339 ~~~~i~G~~~LgtsGqn 355 (476)
T 3e0j_A 339 YQATIDGVRFLGTSGQN 355 (476)
T ss_dssp EEEEETTEEEEECSSHH
T ss_pred eEEEECCEEEEEECCCC
Confidence 45788999999999954
No 62
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=53.78 E-value=13 Score=25.04 Aligned_cols=32 Identities=28% Similarity=0.238 Sum_probs=24.2
Q ss_pred hhCCCCEEEEcCccCccEEEE------CCEEEEccCCc
Q psy10860 41 RQLDVDILISGHTHKFEAYEH------ENKFYINPGSA 72 (91)
Q Consensus 41 ~~~~~dvvi~GHtH~~~~~~~------~~~~~iNPGS~ 72 (91)
.+.++|.+|.|.||.|..... .++.+|+|+..
T Consensus 177 ~~~~~D~IVLGCTh~p~l~~~i~~~~~~~v~vIDs~~~ 214 (276)
T 2dwu_A 177 TKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEE 214 (276)
T ss_dssp HTSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHH
T ss_pred HhcCCCEEEECCCCHHHHHHHHHHHcCCCCeEECcHHH
Confidence 346899999999999975431 36788888753
No 63
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=53.33 E-value=13 Score=24.78 Aligned_cols=30 Identities=30% Similarity=0.294 Sum_probs=23.3
Q ss_pred hCCCCEEEEcCccCccEEEE------CCEEEEccCC
Q psy10860 42 QLDVDILISGHTHKFEAYEH------ENKFYINPGS 71 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~------~~~~~iNPGS 71 (91)
+.++|.+|.|.||.|..... .++.+|+|+.
T Consensus 174 ~~~~d~iVLGCTh~p~l~~~i~~~~~~~vpviDs~~ 209 (267)
T 2gzm_A 174 NTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGD 209 (267)
T ss_dssp HSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHH
T ss_pred hcCCCEEEEcccChHHHHHHHHHHcCCCCEEECcHH
Confidence 46899999999999976431 2678888875
No 64
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=53.27 E-value=3.7 Score=29.95 Aligned_cols=17 Identities=29% Similarity=0.194 Sum_probs=11.6
Q ss_pred EEECCEEEEccCCcCCC
Q psy10860 59 YEHENKFYINPGSATGA 75 (91)
Q Consensus 59 ~~~~~~~~iNPGS~~~~ 75 (91)
.+...+++|||||-+.-
T Consensus 15 ~~~~~ILviN~GSSS~K 31 (415)
T 2e1z_A 15 NEFPVVLVINCGSSSIK 31 (415)
T ss_dssp --CCEEEEEEECSSEEE
T ss_pred CCCCeEEEEECCchhhe
Confidence 34466888999997653
No 65
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=52.08 E-value=26 Score=21.04 Aligned_cols=33 Identities=21% Similarity=0.193 Sum_probs=23.8
Q ss_pred EEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 18 RIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 18 ~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
+..+..|++ .+.+.+.+++.++|+||.|...+.
T Consensus 99 ~~~v~~G~~------~~~I~~~a~~~~~DLIV~G~~g~~ 131 (163)
T 1tq8_A 99 EERPIVGAP------VDALVNLADEEKADLLVVGNVGLS 131 (163)
T ss_dssp EEEEECSSH------HHHHHHHHHHTTCSEEEEECCCCC
T ss_pred EEEEecCCH------HHHHHHHHHhcCCCEEEECCCCCC
Confidence 344556643 567777888899999999977554
No 66
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=51.72 E-value=19 Score=20.57 Aligned_cols=22 Identities=5% Similarity=0.054 Sum_probs=17.9
Q ss_pred HHHHHHHHhhCCCCEEEEcCcc
Q psy10860 33 PEALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH 54 (91)
.+.+.+.+++.++|+||.|...
T Consensus 98 ~~~I~~~a~~~~~dliV~G~~g 119 (138)
T 1q77_A 98 SEEVKKFVEGKGYELVVWACYP 119 (138)
T ss_dssp HHHHHHHHTTSCCSEEEECSCC
T ss_pred HHHHHHHHHhcCCCEEEEeCCC
Confidence 5677788888899999999653
No 67
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=51.65 E-value=19 Score=21.46 Aligned_cols=23 Identities=13% Similarity=0.374 Sum_probs=18.8
Q ss_pred HHHHHHHHhhCCCCEEEEcCccC
Q psy10860 33 PEALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~ 55 (91)
.+.+.+.+++.++|+||.|....
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~ 128 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKR 128 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCC
Confidence 56778888889999999996654
No 68
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=51.52 E-value=9.5 Score=25.82 Aligned_cols=31 Identities=26% Similarity=0.243 Sum_probs=24.1
Q ss_pred hCCCCEEEEcCccCccEEEE------CCEEEEccCCc
Q psy10860 42 QLDVDILISGHTHKFEAYEH------ENKFYINPGSA 72 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~------~~~~~iNPGS~ 72 (91)
+.++|.+|-|.||.|..... .+..+|.|+..
T Consensus 176 ~~g~D~iVLGCTh~pll~~~i~~~~~~~v~vIDs~~~ 212 (269)
T 3ist_A 176 STKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEE 212 (269)
T ss_dssp GSCCCEEEECSTTGGGGHHHHHHHHCTTSEEECTHHH
T ss_pred hCCCCEEEECCCCHHHHHHHHHHHcCCCCeEECcHHH
Confidence 45899999999999986532 36788888753
No 69
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=51.13 E-value=21 Score=21.20 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=23.7
Q ss_pred EEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 20 GLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 20 ~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.+..|++ .+.+.+.+++.++|+||.|......
T Consensus 99 ~~~~g~~------~~~I~~~a~~~~~DlIV~G~~g~~~ 130 (170)
T 2dum_A 99 IIRFGIP------WDEIVKVAEEENVSLIILPSRGKLS 130 (170)
T ss_dssp EEEEECH------HHHHHHHHHHTTCSEEEEESCCCCC
T ss_pred EEecCCh------HHHHHHHHHHcCCCEEEECCCCCCc
Confidence 4555653 5677788888999999999776543
No 70
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=51.05 E-value=18 Score=20.90 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=22.1
Q ss_pred EEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccC
Q psy10860 19 IGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 19 i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~ 55 (91)
..+..|++ .+.+.+.+++.++|+||.|...+
T Consensus 90 ~~~~~g~~------~~~I~~~a~~~~~dliV~G~~~~ 120 (150)
T 3tnj_A 90 RWLVWGEP------REEIIRIAEQENVDLIVVGSHGR 120 (150)
T ss_dssp EEEEESCH------HHHHHHHHHHTTCSEEEEEEC--
T ss_pred EEEecCCH------HHHHHHHHHHcCCCEEEEecCCC
Confidence 45556654 46777888889999999996654
No 71
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=50.26 E-value=18 Score=21.16 Aligned_cols=35 Identities=14% Similarity=0.264 Sum_probs=24.9
Q ss_pred EEEEEec-CCCCCCCCCHHHHHHH-HhhCCCCEEEEcCccCcc
Q psy10860 17 FRIGLCH-GHDIIPWGDPEALALL-QRQLDVDILISGHTHKFE 57 (91)
Q Consensus 17 ~~i~~~H-g~~~~~~~~~~~l~~~-~~~~~~dvvi~GHtH~~~ 57 (91)
.+..+.. |++ .+.+.+. +++.++|+||.|...+..
T Consensus 96 ~~~~v~~~g~~------~~~I~~~~a~~~~~DlIV~G~~g~~~ 132 (156)
T 3fg9_A 96 VEPLVYEGGDV------DDVILEQVIPEFKPDLLVTGADTEFP 132 (156)
T ss_dssp EEEEEEECSCH------HHHHHHTHHHHHCCSEEEEETTCCCT
T ss_pred eEEEEEeCCCH------HHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 3455566 654 4667777 788899999999876543
No 72
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=49.79 E-value=16 Score=24.87 Aligned_cols=29 Identities=28% Similarity=0.188 Sum_probs=23.2
Q ss_pred CCCEEEEcCccCccEEEE------CCEEEEccCCc
Q psy10860 44 DVDILISGHTHKFEAYEH------ENKFYINPGSA 72 (91)
Q Consensus 44 ~~dvvi~GHtH~~~~~~~------~~~~~iNPGS~ 72 (91)
++|.+|-|.||.|..... .++.+|+|+..
T Consensus 196 g~D~iILGCTh~PlL~~~i~~~~~~~v~lIDs~~~ 230 (274)
T 3uhf_A 196 TPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDA 230 (274)
T ss_dssp CCSEEEECSTTGGGGHHHHHHHHCTTCEEEEHHHH
T ss_pred CCCEEEECCCChHHHHHHHHHHcCCCCEEEcCHHH
Confidence 899999999999987532 36788888753
No 73
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=49.74 E-value=12 Score=24.54 Aligned_cols=20 Identities=20% Similarity=0.039 Sum_probs=16.5
Q ss_pred hhCCCCEEEEcCccCccEEE
Q psy10860 41 RQLDVDILISGHTHKFEAYE 60 (91)
Q Consensus 41 ~~~~~dvvi~GHtH~~~~~~ 60 (91)
.+.++|.+|-|.||.|....
T Consensus 187 ~~~g~d~vILGCTe~pll~~ 206 (231)
T 3ojc_A 187 EAQGVQGIIFGCTEITLLVN 206 (231)
T ss_dssp HHTTCSCEEECSGGGGGTCC
T ss_pred HHCCCCEEEECCCCHHHhcc
Confidence 34589999999999997653
No 74
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=49.58 E-value=9.6 Score=25.75 Aligned_cols=31 Identities=26% Similarity=0.239 Sum_probs=23.7
Q ss_pred hCCCCEEEEcCccCccEEEE----CCEEEEccCCc
Q psy10860 42 QLDVDILISGHTHKFEAYEH----ENKFYINPGSA 72 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~----~~~~~iNPGS~ 72 (91)
+.++|.+|-|.||.|..... .+..+|+|+..
T Consensus 176 ~~g~D~iILGCTh~pll~~~i~~~~~v~viD~~~~ 210 (268)
T 3out_A 176 DKNIQALILGCTHYPIIKESIAKILDVKLIDPSLQ 210 (268)
T ss_dssp TSCCSEEEECSTTGGGGHHHHHHHCCSEEECCHHH
T ss_pred hCCCCEEEECCCChHHHHHHHhcCCCCceechHHH
Confidence 45799999999999986532 46778888753
No 75
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=47.71 E-value=13 Score=25.08 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=22.4
Q ss_pred CCCCEEEEcCccCccEEEE-----C-CEEEEccCC
Q psy10860 43 LDVDILISGHTHKFEAYEH-----E-NKFYINPGS 71 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~~~-----~-~~~~iNPGS 71 (91)
.++|.+|.|.||.|..... + ++.+|+|+.
T Consensus 195 ~~~D~IVLGCTh~p~l~~~i~~~lg~~vpviDs~~ 229 (285)
T 2jfn_A 195 EPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGA 229 (285)
T ss_dssp SCCSEEEECSTTGGGGHHHHHHHSCTTCEEECSHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhcCCCCEEECcHH
Confidence 4799999999999976421 2 578888875
No 76
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=46.44 E-value=45 Score=19.85 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=23.3
Q ss_pred EEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 19 IGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 19 i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
+.+..|.+ .+.+.+.+++.++|+||.|...+..
T Consensus 105 ~~v~~G~~------~~~I~~~a~~~~~DLIVmG~~g~~~ 137 (175)
T 2gm3_A 105 AWIKTGDP------KDVICQEVKRVRPDFLVVGSRGLGR 137 (175)
T ss_dssp EEEEESCH------HHHHHHHHHHHCCSEEEEEECCCC-
T ss_pred EEEecCCH------HHHHHHHHHHhCCCEEEEeCCCCCh
Confidence 34556653 5677778888899999999765543
No 77
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=45.47 E-value=22 Score=22.88 Aligned_cols=17 Identities=24% Similarity=0.071 Sum_probs=15.1
Q ss_pred CCCCEEEEcCccCccEE
Q psy10860 43 LDVDILISGHTHKFEAY 59 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~ 59 (91)
.++|.+|.|.||.|...
T Consensus 184 ~g~d~iiLGCT~~p~l~ 200 (226)
T 2zsk_A 184 EGIEGVILGCTELPLAI 200 (226)
T ss_dssp SCCSEEEECSSSGGGTC
T ss_pred cCCCEEEECCCCHHHHh
Confidence 68999999999999763
No 78
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=45.40 E-value=18 Score=20.66 Aligned_cols=21 Identities=38% Similarity=0.600 Sum_probs=17.7
Q ss_pred HHHHHHHHhhCCCCEEEEcCc
Q psy10860 33 PEALALLQRQLDVDILISGHT 53 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHt 53 (91)
.+.+.+.+++.++|++|.|..
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCC
Confidence 467778888899999999966
No 79
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B
Probab=43.83 E-value=8.6 Score=23.25 Aligned_cols=16 Identities=6% Similarity=0.214 Sum_probs=13.0
Q ss_pred CEEEEccCCcCCCCCC
Q psy10860 63 NKFYINPGSATGAFNP 78 (91)
Q Consensus 63 ~~~~iNPGS~~~~~~~ 78 (91)
=+++||||.|+...+.
T Consensus 93 ltlWvDPgeVs~R~GE 108 (120)
T 3e9v_A 93 LTLWVDPYEVSYRIGE 108 (120)
T ss_dssp EEEEEETTEEEEEEST
T ss_pred cEEEECCCEEEEEecC
Confidence 3678999999988665
No 80
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=42.82 E-value=15 Score=24.72 Aligned_cols=30 Identities=13% Similarity=-0.038 Sum_probs=21.3
Q ss_pred hCCCCEEEEcCccCccEEEE----CCEEEEccCC
Q psy10860 42 QLDVDILISGHTHKFEAYEH----ENKFYINPGS 71 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~----~~~~~iNPGS 71 (91)
+.++|.+|-|.||.|..... .+..+|.|+.
T Consensus 207 ~~g~d~vILGCTh~pll~~~l~~~~~v~viDs~~ 240 (268)
T 3s81_A 207 ARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTA 240 (268)
T ss_dssp HTTCSEEEECSTTHHHHHTTTGGGSSSCEEEHHH
T ss_pred hCCCCEEEECccCHHHHHHHHhcCCCCeEEccHH
Confidence 45899999999999976532 2455666653
No 81
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=42.51 E-value=17 Score=23.74 Aligned_cols=22 Identities=23% Similarity=0.178 Sum_probs=17.7
Q ss_pred HHHHHHHhhCCCCEEEEcCccC
Q psy10860 34 EALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 34 ~~l~~~~~~~~~dvvi~GHtH~ 55 (91)
..+.+++++.++|+|++|+|-.
T Consensus 81 ~~l~~~i~~~~p~~Vl~g~t~~ 102 (217)
T 3ih5_A 81 SILVNLFKEEQPQICLMGATVI 102 (217)
T ss_dssp HHHHHHHHHHCCSEEEEECSHH
T ss_pred HHHHHHHHhcCCCEEEEeCCcc
Confidence 3456677788999999999974
No 82
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=42.20 E-value=13 Score=23.54 Aligned_cols=57 Identities=19% Similarity=0.249 Sum_probs=32.7
Q ss_pred EEEEEecCCCCCC----------CCCHH----HHHHHHhhCCCCEEEEcCccCccE-E------EECCEEEEccCCcC
Q psy10860 17 FRIGLCHGHDIIP----------WGDPE----ALALLQRQLDVDILISGHTHKFEA-Y------EHENKFYINPGSAT 73 (91)
Q Consensus 17 ~~i~~~Hg~~~~~----------~~~~~----~l~~~~~~~~~dvvi~GHtH~~~~-~------~~~~~~~iNPGS~~ 73 (91)
.+|++.||+-..- ..+.+ .+++.+++.+.++-++=--|.-.. . ..-.-.+||||+.+
T Consensus 8 ~~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~~~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~T 85 (153)
T 3lwz_A 8 FHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFT 85 (153)
T ss_dssp EEEEEEECTTGGGTTTSSHHHHCCCCHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEEcCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCceEEEccccce
Confidence 4799999976421 12333 344556666777666544443211 0 11256899999876
No 83
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=41.91 E-value=11 Score=23.58 Aligned_cols=56 Identities=13% Similarity=0.193 Sum_probs=32.6
Q ss_pred EEEEecCCCCCC----------CCCHH----HHHHHHhhCCCCEEEEcCccCccE-EE------ECCEEEEccCCcC
Q psy10860 18 RIGLCHGHDIIP----------WGDPE----ALALLQRQLDVDILISGHTHKFEA-YE------HENKFYINPGSAT 73 (91)
Q Consensus 18 ~i~~~Hg~~~~~----------~~~~~----~l~~~~~~~~~dvvi~GHtH~~~~-~~------~~~~~~iNPGS~~ 73 (91)
+|++.||+-.+- ..+.+ .+++.+++.+.++-++=--|.-.. .+ .-.-.+||||+.+
T Consensus 2 ~IlvlNGPNLNlLG~REP~iYG~~tl~di~~~l~~~a~~~g~~~~~~QSN~EgeLid~Ih~a~~~~dgiiiNpgA~T 78 (143)
T 1gqo_A 2 HFLILNGPNVNRLGSREPEVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALS 78 (143)
T ss_dssp EEEEEECTTGGGTTSSCHHHHCSCCHHHHHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred eEEEEeCCCccccCCCCCCcCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEEccchhc
Confidence 589999976421 12233 344556666777766655444221 11 1246899999876
No 84
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=41.77 E-value=15 Score=24.93 Aligned_cols=30 Identities=27% Similarity=0.220 Sum_probs=23.2
Q ss_pred hCCCCEEEEcCccCccEEEE------CCEEEEccCC
Q psy10860 42 QLDVDILISGHTHKFEAYEH------ENKFYINPGS 71 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~------~~~~~iNPGS 71 (91)
+.++|.+|.|.||.|..... .++.+|+|+.
T Consensus 195 ~~g~D~IVLGCTh~p~l~~~i~~~l~~~vpvIDs~~ 230 (290)
T 2vvt_A 195 LKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGA 230 (290)
T ss_dssp TSCCSEEEECSTTGGGGHHHHHHHHCTTCEEEEHHH
T ss_pred hCCCCEEEECCcCHHHHHHHHHHHcCCCCeEECcHH
Confidence 35799999999999976431 3678888875
No 85
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=41.46 E-value=13 Score=23.48 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=33.1
Q ss_pred EEEEecCCCCCC----------CCCHH----HHHHHHhhCCCCEEEEcCccCccE-EE------ECCEEEEccCCcC
Q psy10860 18 RIGLCHGHDIIP----------WGDPE----ALALLQRQLDVDILISGHTHKFEA-YE------HENKFYINPGSAT 73 (91)
Q Consensus 18 ~i~~~Hg~~~~~----------~~~~~----~l~~~~~~~~~dvvi~GHtH~~~~-~~------~~~~~~iNPGS~~ 73 (91)
+|++.||+-..- ..+.+ .+++.+++.+.++-++=--|.-.. .+ .-.-.+||||+.+
T Consensus 3 ~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~l~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~T 79 (154)
T 1uqr_A 3 KILLLNGPNLNMLGKREPHIYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEESLINRIHQAFQNTDFIIINPGAFT 79 (154)
T ss_dssp EEEEEECTTGGGTTCSSGGGTTCCCHHHHHHHHHHHHHHTTCEEEEEECSSHHHHHHHHHHTTTTCCEEEEECTTHH
T ss_pred EEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECcchhc
Confidence 599999976421 12333 345566677777776655554221 11 1246899999865
No 86
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=41.39 E-value=24 Score=23.31 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=22.2
Q ss_pred CCCCEEEEcCccCccEEEE-----C-------CEEEEccCC
Q psy10860 43 LDVDILISGHTHKFEAYEH-----E-------NKFYINPGS 71 (91)
Q Consensus 43 ~~~dvvi~GHtH~~~~~~~-----~-------~~~~iNPGS 71 (91)
.++|.+|.|.||.|..... + ++.+|+|+.
T Consensus 172 ~~~d~iILGCTh~p~l~~~i~~~~~~~~~~~~~v~viDs~~ 212 (255)
T 2jfz_A 172 ILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGD 212 (255)
T ss_dssp SCCSEEEEESTTGGGGHHHHHHHHHHHSCCSSCCEEEEHHH
T ss_pred CCCCEEEEcCcChHHHHHHHHHHhCccccCCCCCEEECcHH
Confidence 5799999999999975421 1 477888875
No 87
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=40.91 E-value=11 Score=23.79 Aligned_cols=57 Identities=12% Similarity=-0.003 Sum_probs=34.1
Q ss_pred EEEEEecCCCCCC----------CCCHH----HHHHHHhhCCCCEEEEcCccCccE-EE------ECCEEEEccCCcC
Q psy10860 17 FRIGLCHGHDIIP----------WGDPE----ALALLQRQLDVDILISGHTHKFEA-YE------HENKFYINPGSAT 73 (91)
Q Consensus 17 ~~i~~~Hg~~~~~----------~~~~~----~l~~~~~~~~~dvvi~GHtH~~~~-~~------~~~~~~iNPGS~~ 73 (91)
.+|++.||.-..- ..+.+ .+++.+++.+.++-++=--|.-.. .+ .-.-.+||||+.+
T Consensus 7 m~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a~~~~dgiIINpgA~T 84 (156)
T 1gtz_A 7 APIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYS 84 (156)
T ss_dssp SCEEEEECTTGGGTTTSCHHHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHHHHCSEEEEECTTHH
T ss_pred ceEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhhcCcEEEECchhhc
Confidence 3599999976421 12233 345566677777777655554321 11 1356899999875
No 88
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=40.80 E-value=14 Score=25.02 Aligned_cols=30 Identities=30% Similarity=0.330 Sum_probs=22.7
Q ss_pred hCCCCEEEEcCccCccEEEE-----C-CEEEEccCC
Q psy10860 42 QLDVDILISGHTHKFEAYEH-----E-NKFYINPGS 71 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~~~-----~-~~~~iNPGS 71 (91)
+.++|.+|.|.||.|..... + ++.+|+|+.
T Consensus 194 ~~g~D~IVLGCTh~p~l~~~i~~~l~~~vpvIDs~~ 229 (286)
T 2jfq_A 194 NSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGL 229 (286)
T ss_dssp TCSCSEEEEESSSGGGGHHHHHHHTTTCSEEEEHHH
T ss_pred hCCCCEEEEcCcCHHHHHHHHHHHcCCCCEEECcHH
Confidence 35799999999999976431 2 677888875
No 89
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=39.79 E-value=19 Score=24.24 Aligned_cols=21 Identities=14% Similarity=0.252 Sum_probs=16.4
Q ss_pred HHHHHHhhCCCCEEEEcCccC
Q psy10860 35 ALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH~ 55 (91)
.|.+.+++.++|+|++|++-.
T Consensus 103 ~La~~i~~~~~dlVl~G~~s~ 123 (264)
T 1o97_C 103 ILTEVIKKEAPDMVFAGVQSS 123 (264)
T ss_dssp HHHHHHHHHCCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEcCCcc
Confidence 455566666899999999984
No 90
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=38.92 E-value=18 Score=23.08 Aligned_cols=30 Identities=17% Similarity=0.057 Sum_probs=20.6
Q ss_pred hCCCCEEEEcCccCc--cEEEE----CCEEEEccCC
Q psy10860 42 QLDVDILISGHTHKF--EAYEH----ENKFYINPGS 71 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~--~~~~~----~~~~~iNPGS 71 (91)
+.++|.+|.|.||.| ..... -++.+|+|..
T Consensus 172 ~~~~d~IvLgCT~~~t~~~~~~i~~~~~vpvids~~ 207 (228)
T 2eq5_A 172 EKGVEVIALGCTGMSTIGIAPVLEEEVGIPVIDPVI 207 (228)
T ss_dssp HTTCSEEEECCTHHHHHTCHHHHHHHHSSCEECHHH
T ss_pred HcCCCEEEECCCCcchHHHHHHHHHHcCCCEEchHH
Confidence 358999999999999 64321 1455666653
No 91
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=38.29 E-value=46 Score=18.78 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=21.3
Q ss_pred EEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCc
Q psy10860 19 IGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 19 i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
..+..|++ .+.+.+.++ ++|++|.|.....
T Consensus 84 ~~v~~g~~------~~~I~~~a~--~~dliV~G~~~~~ 113 (138)
T 3idf_A 84 VVIKEGEP------VEMVLEEAK--DYNLLIIGSSENS 113 (138)
T ss_dssp EEEEESCH------HHHHHHHHT--TCSEEEEECCTTS
T ss_pred EEEecCCh------HHHHHHHHh--cCCEEEEeCCCcc
Confidence 45566653 456777776 9999999987553
No 92
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=37.71 E-value=17 Score=23.44 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=15.3
Q ss_pred hCCCCEEEEcCccCccEE
Q psy10860 42 QLDVDILISGHTHKFEAY 59 (91)
Q Consensus 42 ~~~~dvvi~GHtH~~~~~ 59 (91)
+.++|.+|.|.||.|...
T Consensus 184 ~~g~d~iiLGCT~~p~l~ 201 (228)
T 1jfl_A 184 ERGAECIIAGCTEVSVVL 201 (228)
T ss_dssp HTTCSEEEECSHHHHHHC
T ss_pred HCCcCEEEECCCChHhhh
Confidence 458999999999998753
No 93
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=36.77 E-value=25 Score=23.53 Aligned_cols=21 Identities=24% Similarity=0.406 Sum_probs=16.2
Q ss_pred HHHHHHhhCCCCEEEEcCccC
Q psy10860 35 ALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH~ 55 (91)
.|.+.+++.++|+|++|++-.
T Consensus 104 ~La~~i~~~~~dlVl~G~~s~ 124 (252)
T 1efp_B 104 ILAAVARAEGTELIIAGKQAI 124 (252)
T ss_dssp HHHHHHHHHTCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEcCCcc
Confidence 455566666899999999984
No 94
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=36.34 E-value=25 Score=23.57 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCCEEEEcCccC
Q psy10860 35 ALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH~ 55 (91)
.|.+.+++.++|+|++|++-.
T Consensus 107 ~La~~i~~~~~dlVl~G~~s~ 127 (255)
T 1efv_B 107 VLAKLAEKEKVDLVLLGKQAI 127 (255)
T ss_dssp HHHHHHHHHTCSEEEEESCCT
T ss_pred HHHHHHHhcCCCEEEEeCccc
Confidence 455566666899999999984
No 95
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=32.50 E-value=33 Score=21.38 Aligned_cols=19 Identities=16% Similarity=0.256 Sum_probs=13.8
Q ss_pred HHHHHHhhCCCCEEEEcCccC
Q psy10860 35 ALALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH~ 55 (91)
.+.++++ ++|+|++|+|-.
T Consensus 62 ~l~~~~~--~p~~Vl~g~t~~ 80 (166)
T 3fet_A 62 GILKIAG--NYDYIAIGSTEV 80 (166)
T ss_dssp HHHHHHT--TCSEEEEECSHH
T ss_pred HHHHHHc--CCCEEEEcCCCc
Confidence 3444554 899999999853
No 96
>3oon_A Outer membrane protein (TPN50); protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG; 1.79A {Borrelia burgdorferi}
Probab=31.83 E-value=75 Score=18.19 Aligned_cols=21 Identities=43% Similarity=0.732 Sum_probs=13.8
Q ss_pred HHHHHhhC-CCCEEEEcCccCc
Q psy10860 36 LALLQRQL-DVDILISGHTHKF 56 (91)
Q Consensus 36 l~~~~~~~-~~dvvi~GHtH~~ 56 (91)
+...++.. +..+.|.|||-..
T Consensus 39 ~a~~l~~~~~~~i~I~GhtD~~ 60 (123)
T 3oon_A 39 IAKLLEKFKKNNILIEGHTEQF 60 (123)
T ss_dssp HHHHHHHSCSCCEEEEECCCSC
T ss_pred HHHHHHHCCCceEEEEEEeCCC
Confidence 33444443 4589999999763
No 97
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=31.16 E-value=68 Score=22.10 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=24.5
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 17 FRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 17 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.||.+.+|.-. +++.+.+.+. .+.++|.+|+||.-.+.
T Consensus 196 gkIaV~~GgGt--sG~~~~i~~a-~~~GvDt~ITGe~~~~~ 233 (278)
T 3rxy_A 196 GKIAVVHGAGT--NGGYAVARAY-FDHGVRTVLYIHIAPEE 233 (278)
T ss_dssp CSEEECCSSSS--CCHHHHHHHH-HHTTCCEEEESCCCHHH
T ss_pred CEEEEEcCCCC--CCcHHHHHHH-HHcCCCEEEEecCchHH
Confidence 36888887432 2234445444 46799999999976543
No 98
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=29.72 E-value=87 Score=18.66 Aligned_cols=43 Identities=12% Similarity=0.021 Sum_probs=23.9
Q ss_pred CceEEEEECCEEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEE
Q psy10860 7 PEKKVVTVGQFRIGLCHGHDIIPWGDPEALALLQRQLDVDILIS 50 (91)
Q Consensus 7 P~~~~~~~~g~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~ 50 (91)
|......-.+..|+++||-....... ..+.+.+.+.+..+++.
T Consensus 13 ~~~~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~ 55 (251)
T 3dkr_A 13 PQPFEYEGTDTGVVLLHAYTGSPNDM-NFMARALQRSGYGVYVP 55 (251)
T ss_dssp CCCEEECCSSEEEEEECCTTCCGGGG-HHHHHHHHHTTCEEEEC
T ss_pred CCCcccCCCCceEEEeCCCCCCHHHH-HHHHHHHHHCCCEEEec
Confidence 44444444567899999976443322 23334444456666654
No 99
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=29.12 E-value=90 Score=18.23 Aligned_cols=9 Identities=11% Similarity=0.353 Sum_probs=6.0
Q ss_pred CCEEEEcCc
Q psy10860 45 VDILISGHT 53 (91)
Q Consensus 45 ~dvvi~GHt 53 (91)
..+++.||+
T Consensus 65 ~~~~l~G~S 73 (192)
T 1uxo_A 65 ENTYLVAHS 73 (192)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEeC
Confidence 457777775
No 100
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=28.54 E-value=65 Score=20.91 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=19.8
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.+.+.+.+++.++|+++.|...+..
T Consensus 226 ~~~I~~~a~~~~~dLiVmG~~g~~~ 250 (290)
T 3mt0_A 226 DVLIPRTAQKLDAVVTVIGTVARTG 250 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSCC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCcC
Confidence 5677788888899999999775543
No 101
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=28.26 E-value=38 Score=23.44 Aligned_cols=20 Identities=15% Similarity=0.272 Sum_probs=15.5
Q ss_pred HHHHHHhhCCCCEEEEcCcc
Q psy10860 35 ALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH 54 (91)
.+.+..++.++|+|++|+|-
T Consensus 77 ~La~li~~~~pdlVL~g~ts 96 (315)
T 1efv_A 77 LILATQKQFNYTHICAGASA 96 (315)
T ss_dssp HHHHHHHHHCCSEEEEESSH
T ss_pred HHHHHHHhcCCCEEEEcCCC
Confidence 45556667789999999975
No 102
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=28.10 E-value=38 Score=23.49 Aligned_cols=20 Identities=10% Similarity=0.212 Sum_probs=15.5
Q ss_pred HHHHHHhhCCCCEEEEcCcc
Q psy10860 35 ALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH 54 (91)
.+.+..++.++|+|++|+|-
T Consensus 78 ~La~~i~~~~pdlVL~g~ts 97 (320)
T 1o97_D 78 SVSALIAAHNPSVVLLPHSV 97 (320)
T ss_dssp HHHHHHHHHCCSEEEEECSH
T ss_pred HHHHHHHhcCCCEEEEeCCC
Confidence 45556667789999999975
No 103
>2ll1_A U1-TRTX-SP1A; toxin; NMR {Theraphosidae}
Probab=26.83 E-value=18 Score=16.42 Aligned_cols=8 Identities=38% Similarity=0.463 Sum_probs=5.7
Q ss_pred EcCccCcc
Q psy10860 50 SGHTHKFE 57 (91)
Q Consensus 50 ~GHtH~~~ 57 (91)
|||.|-|-
T Consensus 2 cghlhdpc 9 (33)
T 2ll1_A 2 CGHLHDPC 9 (33)
T ss_dssp CBCSSCBC
T ss_pred CcccCCCC
Confidence 57888764
No 104
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=26.41 E-value=63 Score=21.46 Aligned_cols=27 Identities=26% Similarity=0.261 Sum_probs=21.0
Q ss_pred CCEEEEcCccCccEEEE-----C-CEEEEccCC
Q psy10860 45 VDILISGHTHKFEAYEH-----E-NKFYINPGS 71 (91)
Q Consensus 45 ~dvvi~GHtH~~~~~~~-----~-~~~~iNPGS 71 (91)
+|.+|.|.||.|..... + ++.+|.|+.
T Consensus 185 ~d~iVLGCTh~p~l~~~i~~~~~~~vpviDs~~ 217 (273)
T 2oho_A 185 IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGA 217 (273)
T ss_dssp CSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHH
T ss_pred CCEEEEcCCCHHHHHHHHHHHhCCCCEEECcHH
Confidence 99999999999975431 3 577888875
No 105
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1
Probab=25.63 E-value=22 Score=23.30 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=12.1
Q ss_pred HhhCCC-CEEEEcCccCc
Q psy10860 40 QRQLDV-DILISGHTHKF 56 (91)
Q Consensus 40 ~~~~~~-dvvi~GHtH~~ 56 (91)
....++ .|+|+|||+--
T Consensus 99 v~~L~v~~IvV~GHs~CG 116 (221)
T 1ekj_A 99 VLHLKVSNIVVIGHSACG 116 (221)
T ss_dssp HHTSCCSEEEEEEESSCH
T ss_pred HHhcCCCEEEEEccCCCC
Confidence 344565 58899999873
No 106
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=25.32 E-value=39 Score=22.66 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=17.2
Q ss_pred HHHHhhCCCCEEEEcCccCc
Q psy10860 37 ALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 37 ~~~~~~~~~dvvi~GHtH~~ 56 (91)
...+++.+++.++-||+=+.
T Consensus 74 ~~mL~d~G~~~ViiGHSERR 93 (244)
T 2v5b_A 74 LASLKDYGISWVVLGHSERR 93 (244)
T ss_dssp HHHHHHTTCCEEEECCHHHH
T ss_pred HHHHHHcCCCEEEeCchhhh
Confidence 66778999999999999764
No 107
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=25.19 E-value=61 Score=21.22 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=21.9
Q ss_pred CCEEEEcCccCccEEEE-----CCEEEEccCCc
Q psy10860 45 VDILISGHTHKFEAYEH-----ENKFYINPGSA 72 (91)
Q Consensus 45 ~dvvi~GHtH~~~~~~~-----~~~~~iNPGS~ 72 (91)
+|.+|.|.||.|..... ++..+|+|..+
T Consensus 171 ~d~IILGCT~~p~l~~~i~~~~~~vpviDs~~~ 203 (254)
T 1b73_A 171 IDTLILGCTHYPLLKKEIKKFLGDAEVVDSSEA 203 (254)
T ss_dssp CSEEEECCCCTTCCHHHHHHHSCSCEEECHHHH
T ss_pred CCEEEECccChHHHHHHHHHHcCCCeEECCHHH
Confidence 99999999999986421 26788888763
No 108
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=24.99 E-value=48 Score=20.57 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=15.4
Q ss_pred HHHHH-HhhCCCCEEEEcCccCc
Q psy10860 35 ALALL-QRQLDVDILISGHTHKF 56 (91)
Q Consensus 35 ~l~~~-~~~~~~dvvi~GHtH~~ 56 (91)
.+... ++..+..+.|.|||=..
T Consensus 72 ~ia~~ll~~~~~~i~I~GhTD~~ 94 (174)
T 3khn_A 72 TLKDLFIRRREQNINIKGFTDDV 94 (174)
T ss_dssp HHHHHHHHTTTCEEEEEEECCSC
T ss_pred HHHHHHHhCCCCeEEEEEEeCCC
Confidence 34444 55567789999999653
No 109
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=24.57 E-value=1.3e+02 Score=19.41 Aligned_cols=25 Identities=8% Similarity=0.145 Sum_probs=19.7
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.+.+.+.+++.++|+++.|...+..
T Consensus 240 ~~~I~~~a~~~~~dLlV~G~~~~~~ 264 (294)
T 3loq_A 240 HKAILAKREEINATTIFMGSRGAGS 264 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCSC
T ss_pred HHHHHHHHHhcCcCEEEEeCCCCCC
Confidence 5677788888899999999775543
No 110
>3cyp_B Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B* 3imp_B
Probab=24.47 E-value=48 Score=19.71 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=14.4
Q ss_pred HHHHHhhC--CCCEEEEcCccCc
Q psy10860 36 LALLQRQL--DVDILISGHTHKF 56 (91)
Q Consensus 36 l~~~~~~~--~~dvvi~GHtH~~ 56 (91)
+...++.. ...+.|.|||=..
T Consensus 26 ia~~l~~~p~~~~i~I~GhtD~~ 48 (138)
T 3cyp_B 26 IAKIIQKLPKRVHINVRGFTDDT 48 (138)
T ss_dssp HHHHHTTSCTTCEEEEEEECCCC
T ss_pred HHHHHHhCCCCcEEEEEEecCCC
Confidence 33444444 5679999999864
No 111
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=24.38 E-value=54 Score=22.23 Aligned_cols=17 Identities=12% Similarity=0.184 Sum_probs=13.7
Q ss_pred HHHHhhCCCCEEEEcCc
Q psy10860 37 ALLQRQLDVDILISGHT 53 (91)
Q Consensus 37 ~~~~~~~~~dvvi~GHt 53 (91)
.+.+++.+++.++.||+
T Consensus 118 ~~~a~~~g~~~i~~Gh~ 134 (317)
T 1wy5_A 118 KEILESEGFDCIATAHH 134 (317)
T ss_dssp HHHHHHTTCSEEECCCC
T ss_pred HHHHHHcCCCEEEEeCc
Confidence 34566789999999996
No 112
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=24.17 E-value=30 Score=25.05 Aligned_cols=13 Identities=23% Similarity=0.350 Sum_probs=10.4
Q ss_pred CEEEEccCCcCCC
Q psy10860 63 NKFYINPGSATGA 75 (91)
Q Consensus 63 ~~~~iNPGS~~~~ 75 (91)
.+++|||||-+.-
T Consensus 24 ~ILviN~GSSS~K 36 (398)
T 4ijn_A 24 TVLVVNSGSSSLK 36 (398)
T ss_dssp EEEEEEECSSCEE
T ss_pred cEEEEeCCchhhe
Confidence 4788999997654
No 113
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=24.07 E-value=43 Score=22.63 Aligned_cols=20 Identities=25% Similarity=0.456 Sum_probs=16.0
Q ss_pred HHHhhCCCCEEEEcCccCcc
Q psy10860 38 LLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~~ 57 (91)
.++++.+++.++-||+=+..
T Consensus 84 ~mL~d~G~~~ViiGHSERR~ 103 (254)
T 3m9y_A 84 VALADLGVKYVVIGHSERRE 103 (254)
T ss_dssp HHHHHTTCCEEEESCHHHHH
T ss_pred HHHHHcCCCEEEECcccccC
Confidence 35568899999999997743
No 114
>2zvy_A Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=23.89 E-value=58 Score=20.55 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=13.8
Q ss_pred HHHHHhhCCCCEEEEcCccC
Q psy10860 36 LALLQRQLDVDILISGHTHK 55 (91)
Q Consensus 36 l~~~~~~~~~dvvi~GHtH~ 55 (91)
+...++.....|.|.|||=.
T Consensus 82 ia~~L~~~~~~I~I~GHTD~ 101 (183)
T 2zvy_A 82 IAPVLNGIPNRISLAGHTDD 101 (183)
T ss_dssp HHHHHTTSCCCEEEEEECCS
T ss_pred HHHHHHhCCCeEEEEEEeCC
Confidence 33444455558999999975
No 115
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A
Probab=23.82 E-value=58 Score=21.46 Aligned_cols=11 Identities=18% Similarity=0.552 Sum_probs=8.8
Q ss_pred CCCCEEEEcCc
Q psy10860 43 LDVDILISGHT 53 (91)
Q Consensus 43 ~~~dvvi~GHt 53 (91)
.+..++++||+
T Consensus 134 p~~~i~~~GHS 144 (269)
T 1tgl_A 134 PSYKVAVTGHS 144 (269)
T ss_pred CCceEEEEeeC
Confidence 35679999995
No 116
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=23.51 E-value=45 Score=22.23 Aligned_cols=19 Identities=21% Similarity=0.403 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 75 ~mL~d~G~~~ViiGHSERR 93 (233)
T 2jgq_A 75 KHLEELKIHTLLIGHSERR 93 (233)
T ss_dssp HHHHHTTCCEEEECCHHHH
T ss_pred HHHHHcCCCEEEeCchhhh
Confidence 4566889999999999664
No 117
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=23.45 E-value=45 Score=22.46 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
..+++.+++.++-||+=+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR 99 (249)
T 3th6_A 81 GMIKDCGGQWVILGHSERR 99 (249)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhc
Confidence 3556889999999999774
No 118
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1
Probab=23.42 E-value=26 Score=21.93 Aligned_cols=15 Identities=40% Similarity=0.468 Sum_probs=10.8
Q ss_pred hCCC-CEEEEcCccCc
Q psy10860 42 QLDV-DILISGHTHKF 56 (91)
Q Consensus 42 ~~~~-dvvi~GHtH~~ 56 (91)
..++ .++|+|||.--
T Consensus 76 ~L~v~~IvV~GH~~CG 91 (170)
T 1g5c_A 76 ALGDNEIIIVGHTDCG 91 (170)
T ss_dssp HHCCCEEEEEEESSCC
T ss_pred hcCCCEEEEEccCCCC
Confidence 3454 58999999763
No 119
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A
Probab=23.23 E-value=25 Score=23.46 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=11.6
Q ss_pred hhCCC-CEEEEcCccCc
Q psy10860 41 RQLDV-DILISGHTHKF 56 (91)
Q Consensus 41 ~~~~~-dvvi~GHtH~~ 56 (91)
...++ .|+|+|||+--
T Consensus 116 ~~L~V~~IvV~GHs~CG 132 (243)
T 2w3q_A 116 MNVGVTHVMVVGHTGCG 132 (243)
T ss_dssp HTTCCCEEEEEEETTCH
T ss_pred HhcCCCEEEEeccCCcc
Confidence 34565 58899999873
No 120
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=23.14 E-value=45 Score=22.53 Aligned_cols=19 Identities=16% Similarity=0.391 Sum_probs=15.8
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 83 ~mL~d~G~~~ViiGHSERR 101 (255)
T 3qst_A 83 PMIKSFGIEWTILGHSERR 101 (255)
T ss_dssp HHHHTTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhh
Confidence 4566899999999999774
No 121
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=23.13 E-value=69 Score=19.06 Aligned_cols=22 Identities=5% Similarity=-0.097 Sum_probs=17.1
Q ss_pred HHHHHHhhCCCCEEEEcCccCc
Q psy10860 35 ALALLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH~~ 56 (91)
.+.+++.+.++|+||+|..-..
T Consensus 70 ~~~~~L~~~gv~~VI~g~iG~~ 91 (136)
T 2re2_A 70 FMLKSALDHGANALVLSEIGSP 91 (136)
T ss_dssp HHHHHHHHTTCSEEEESCCBHH
T ss_pred HHHHHHHHcCCCEEEECCCCHh
Confidence 5566666789999999987653
No 122
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=23.09 E-value=83 Score=18.06 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=13.3
Q ss_pred HHHHhhC-CCCEEEEcCccCc
Q psy10860 37 ALLQRQL-DVDILISGHTHKF 56 (91)
Q Consensus 37 ~~~~~~~-~~dvvi~GHtH~~ 56 (91)
...++.. +..+.|.|||=..
T Consensus 29 a~~l~~~p~~~i~I~GhtD~~ 49 (118)
T 2hqs_H 29 ANFLRSNPSYKVTVEGHADER 49 (118)
T ss_dssp HHHHHHCTTCCEEEEECCCSS
T ss_pred HHHHHhCCCcEEEEEEECCCC
Confidence 3344433 5689999999764
No 123
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=23.06 E-value=46 Score=22.38 Aligned_cols=19 Identities=11% Similarity=0.244 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR 99 (248)
T 1r2r_A 81 GMIKDCGATWVVLGHSERR 99 (248)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECChhhh
Confidence 4556889999999999764
No 124
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=23.04 E-value=46 Score=22.69 Aligned_cols=19 Identities=16% Similarity=0.385 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 86 ~mLkd~G~~~ViiGHSERR 104 (267)
T 3ta6_A 86 AFLAKLGCSYVVVGHSERR 104 (267)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEEcchhhc
Confidence 3556889999999999764
No 125
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=23.03 E-value=46 Score=22.42 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 82 ~mL~d~G~~~ViiGHSERR 100 (251)
T 2vxn_A 82 PILKDIGVHWVILGHSERR 100 (251)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhh
Confidence 4556889999999999764
No 126
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=22.84 E-value=47 Score=22.50 Aligned_cols=19 Identities=16% Similarity=0.398 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 82 ~mL~d~G~~~ViiGHSERR 100 (257)
T 2yc6_A 82 EMLQDMGLKHVIVGHSERR 100 (257)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhc
Confidence 3556889999999999664
No 127
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=22.75 E-value=46 Score=22.75 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=16.2
Q ss_pred HHHhhCCCCEEEEcCccCcc
Q psy10860 38 LLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~~ 57 (91)
..+++.+++.+|-||+=+..
T Consensus 106 ~MLkd~G~~~VIiGHSERR~ 125 (272)
T 4g1k_A 106 GMVAEFGAAYAIVGHSERRA 125 (272)
T ss_dssp HHHHTTTCCEEEESCHHHHH
T ss_pred HHHHHcCCCEEEECchhccc
Confidence 45668999999999997743
No 128
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=22.71 E-value=47 Score=22.33 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 80 ~mL~d~G~~~ViiGHSERR 98 (247)
T 1ney_A 80 DQIKDVGAKYVILGHSERR 98 (247)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECChhhc
Confidence 4556889999999999764
No 129
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=22.70 E-value=48 Score=23.82 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCCEEEEcCcc
Q psy10860 35 ALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH 54 (91)
.+.+.+++.+++.|+.||+=
T Consensus 102 ~l~~~A~~~Ga~~IatGh~~ 121 (413)
T 2nz2_A 102 KQVEIAQREGAKYVSHGATG 121 (413)
T ss_dssp HHHHHHHHHTCSEEECCCCT
T ss_pred HHHHHHHHcCCCEEEECCcC
Confidence 45567778899999999984
No 130
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=22.70 E-value=47 Score=22.50 Aligned_cols=19 Identities=21% Similarity=0.261 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 88 ~mL~d~G~~~ViiGHSERR 106 (261)
T 1m6j_A 88 GMLVDCQVPYVILGHSERR 106 (261)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhh
Confidence 3556889999999999764
No 131
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=22.54 E-value=48 Score=22.31 Aligned_cols=19 Identities=21% Similarity=0.328 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 80 ~mL~d~G~~~ViiGHSERR 98 (250)
T 1yya_A 80 RMLSDLGCRYAIVGHSERR 98 (250)
T ss_dssp HHHHHTTCSEEEESCHHHH
T ss_pred HHHHHcCCCEEEeCchhhh
Confidence 3556889999999999764
No 132
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=22.26 E-value=49 Score=22.26 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
..+++.+++.++-||+=+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR 99 (248)
T 1o5x_A 81 EIAKDLNIEYVIIGHFERR 99 (248)
T ss_dssp HHHHHTTCCEEEECCHHHH
T ss_pred HHHHHcCCCEEEeCChhhh
Confidence 3556889999999999764
No 133
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=22.22 E-value=49 Score=22.28 Aligned_cols=19 Identities=16% Similarity=0.461 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
..+++.+++.++-||+=+.
T Consensus 81 ~mL~d~G~~~ViiGHSERR 99 (250)
T 2j27_A 81 PILKDFGVNWIVLGHSERR 99 (250)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhh
Confidence 3556889999999999764
No 134
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=22.15 E-value=86 Score=20.47 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=23.7
Q ss_pred EEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 19 IGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 19 i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
+.+..|.+ .+.+.+.+++.++|+++.|...+..
T Consensus 247 ~~v~~g~~------~~~I~~~a~~~~~dLiV~G~~g~~~ 279 (319)
T 3olq_A 247 THVKEGLP------EQVIPQVCEELNAGIVVLGILGRTG 279 (319)
T ss_dssp EEEEESCH------HHHHHHHHHHTTEEEEEEECCSCCS
T ss_pred EEEecCCc------HHHHHHHHHHhCCCEEEEeccCccC
Confidence 44555643 5677788888999999999865543
No 135
>2z15_A Protein TOB1; human TOB1 protein, phosphorylation, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.30A {Homo sapiens} SCOP: d.370.1.1 PDB: 2d5r_B
Probab=21.98 E-value=33 Score=20.86 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=12.8
Q ss_pred CEEEEccCCcCCCCCC
Q psy10860 63 NKFYINPGSATGAFNP 78 (91)
Q Consensus 63 ~~~~iNPGS~~~~~~~ 78 (91)
=+++|+||.|+.....
T Consensus 97 ltlWvDPgeVs~R~ge 112 (130)
T 2z15_A 97 LSVWIDPFEVSYQIGE 112 (130)
T ss_dssp EEEEEETTEEEEEEST
T ss_pred CEEEECCCEEEEEEcC
Confidence 3678999999988654
No 136
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=21.95 E-value=1e+02 Score=20.51 Aligned_cols=48 Identities=19% Similarity=0.300 Sum_probs=30.4
Q ss_pred EEEEEecCCCCCCCCCHHHHHHHHhhCCCCEEEEcCccCccEE--EECCEEEEccCC
Q psy10860 17 FRIGLCHGHDIIPWGDPEALALLQRQLDVDILISGHTHKFEAY--EHENKFYINPGS 71 (91)
Q Consensus 17 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~dvvi~GHtH~~~~~--~~~~~~~iNPGS 71 (91)
.||.+|-|+-. +.+ ..+.+.++|++|.|..-..... ...|..+|.+|=
T Consensus 178 ~rVAv~~GsG~------~~~-~~a~~~gaD~~ITGd~~~h~~~~A~e~gi~~i~~GH 227 (267)
T 2fyw_A 178 SRVAICGGSGQ------SFY-KDALAKGADVYITGDIYYHTAQDMLSDGLLALDPGH 227 (267)
T ss_dssp EEEEEESSSCG------GGH-HHHHHTTCSEEEESCCCHHHHHHHHHTTCEEEECCG
T ss_pred eEEEEEcCCCH------HHH-HHHHHcCCCEEEEccCcHHHHHHHHHCCCeEEECCc
Confidence 57889988752 223 3445678999999987553221 234667777663
No 137
>1ym3_A Carbonic anhydrase (carbonate dehydratase) (carbo dehydratase); Zn protein, structural proteomics in europe, spine, structur genomics; 1.75A {Mycobacterium tuberculosis} PDB: 2a5v_A
Probab=21.57 E-value=29 Score=22.60 Aligned_cols=15 Identities=33% Similarity=0.452 Sum_probs=11.1
Q ss_pred hhCCC-CEEEEcCccC
Q psy10860 41 RQLDV-DILISGHTHK 55 (91)
Q Consensus 41 ~~~~~-dvvi~GHtH~ 55 (91)
...++ .|+|+|||.-
T Consensus 100 ~~L~v~~IvV~GHs~C 115 (215)
T 1ym3_A 100 TVLNVPLIVVLGHDSC 115 (215)
T ss_dssp HTSCCCEEEEEEESSC
T ss_pred HhcCCCEEEEecccCC
Confidence 34565 5889999976
No 138
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=21.07 E-value=53 Score=22.44 Aligned_cols=20 Identities=25% Similarity=0.532 Sum_probs=16.0
Q ss_pred HHHhhCCCCEEEEcCccCcc
Q psy10860 38 LLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~~ 57 (91)
..+++.+++.++-||+=+..
T Consensus 104 ~mLkd~G~~~ViiGHSERR~ 123 (271)
T 3krs_A 104 EMLKDMDVDCSLVGHSERRQ 123 (271)
T ss_dssp HHHHHTTCCEEEESCHHHHH
T ss_pred HHHHHcCCCEEEECchhhcc
Confidence 35568899999999997743
No 139
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=21.06 E-value=59 Score=20.22 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=13.9
Q ss_pred HHHHhhCCCCEEEEcCc
Q psy10860 37 ALLQRQLDVDILISGHT 53 (91)
Q Consensus 37 ~~~~~~~~~dvvi~GHt 53 (91)
.+.+++.++++|+.||.
T Consensus 106 ~~~a~~~g~~~i~tG~~ 122 (219)
T 3bl5_A 106 SILAYQIGARHIITGVC 122 (219)
T ss_dssp HHHHHHHTCSEEECCCC
T ss_pred HHHHHHcCCCEEEEecc
Confidence 45667789999999994
No 140
>2aiz_P Outer membrane protein P6; alpha-beta sandwich; HET: UDP AMU DGL 6CL DAL; NMR {Haemophilus influenzae} SCOP: d.79.7.1
Probab=21.02 E-value=82 Score=18.62 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=12.8
Q ss_pred HHHHhhC-CCCEEEEcCccC
Q psy10860 37 ALLQRQL-DVDILISGHTHK 55 (91)
Q Consensus 37 ~~~~~~~-~~dvvi~GHtH~ 55 (91)
...++.. +..+.|.|||=.
T Consensus 53 a~~L~~~p~~~i~I~GhtD~ 72 (134)
T 2aiz_P 53 AAYLNATPAAKVLVEGNTDE 72 (134)
T ss_dssp HHHHHHSTTCCEEEEEECCS
T ss_pred HHHHHHCCCceEEEEEEECC
Confidence 3344433 568999999965
No 141
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=20.96 E-value=53 Score=22.21 Aligned_cols=19 Identities=26% Similarity=0.623 Sum_probs=15.7
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 82 ~mL~d~G~~~ViiGHSERR 100 (255)
T 1b9b_A 82 LMLQEIGVEYVIVGHSERR 100 (255)
T ss_dssp HHHHTTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhc
Confidence 4566899999999999764
No 142
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=20.89 E-value=39 Score=21.20 Aligned_cols=57 Identities=16% Similarity=0.299 Sum_probs=31.7
Q ss_pred EEEEecCCCCCC--------CC--CH----HHHHHHHhhCCCCEEEEcCccCccE-E------EECCEEEEccCCcCC
Q psy10860 18 RIGLCHGHDIIP--------WG--DP----EALALLQRQLDVDILISGHTHKFEA-Y------EHENKFYINPGSATG 74 (91)
Q Consensus 18 ~i~~~Hg~~~~~--------~~--~~----~~l~~~~~~~~~dvvi~GHtH~~~~-~------~~~~~~~iNPGS~~~ 74 (91)
+|++.||+-..- .+ +. +.+++.+++.+.++-++=--|.-.. . ..-.-.+||||+.+-
T Consensus 6 ~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EgeLId~Ih~a~~~~dgiiINpgA~TH 83 (151)
T 3u80_A 6 KVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTH 83 (151)
T ss_dssp EEEEEECSCC------------CHHHHHHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHHHHHTCCEEEECTTCCS
T ss_pred EEEEEcCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEecCCHHHHHHHHHHhhhcCcEEEECcchhhh
Confidence 799999976431 11 12 2344556667777766544443221 1 112457999998763
No 143
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A
Probab=20.72 E-value=31 Score=22.80 Aligned_cols=16 Identities=38% Similarity=0.507 Sum_probs=11.7
Q ss_pred hhCCC-CEEEEcCccCc
Q psy10860 41 RQLDV-DILISGHTHKF 56 (91)
Q Consensus 41 ~~~~~-dvvi~GHtH~~ 56 (91)
...++ .|+|+|||.--
T Consensus 89 ~~L~v~~IvV~GHt~CG 105 (223)
T 3qy1_A 89 DVLEVEHIIICGHSGCG 105 (223)
T ss_dssp HTTCCSEEEEEEETTCH
T ss_pred HhcCCCEEEEECCCCCH
Confidence 34555 58999999863
No 144
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=20.62 E-value=55 Score=22.18 Aligned_cols=19 Identities=21% Similarity=0.455 Sum_probs=15.6
Q ss_pred HHHhhCCCCEEEEcCccCc
Q psy10860 38 LLQRQLDVDILISGHTHKF 56 (91)
Q Consensus 38 ~~~~~~~~dvvi~GHtH~~ 56 (91)
.++++.+++.++-||+=+.
T Consensus 80 ~mL~d~G~~~ViiGHSERR 98 (259)
T 2i9e_A 80 AMIKDVGADWVILGHSERR 98 (259)
T ss_dssp HHHHHTTCCEEEESCHHHH
T ss_pred HHHHHcCCCEEEECchhhh
Confidence 4556889999999999764
No 145
>2kgw_A Outer membrane protein A; OMPA-L membrane, transmembrane; NMR {Mycobacterium tuberculosis} PDB: 2lca_A 2lbt_A
Probab=20.61 E-value=98 Score=17.94 Aligned_cols=20 Identities=25% Similarity=0.215 Sum_probs=13.0
Q ss_pred HHHHhhC-CCCEEEEcCccCc
Q psy10860 37 ALLQRQL-DVDILISGHTHKF 56 (91)
Q Consensus 37 ~~~~~~~-~~dvvi~GHtH~~ 56 (91)
...++.. +..+.|.|||=..
T Consensus 47 a~~l~~~~~~~i~I~GhtD~~ 67 (129)
T 2kgw_A 47 ADKLKACPDARVTINGYTDNT 67 (129)
T ss_dssp HHHHHTCTTSCEEEEECCCTT
T ss_pred HHHHHhCCCceEEEEEEeCCC
Confidence 3344433 4679999999653
No 146
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=20.53 E-value=1.7e+02 Score=19.94 Aligned_cols=25 Identities=8% Similarity=0.149 Sum_probs=20.9
Q ss_pred HHHHHHHHhhCCCCEEEEcCccCcc
Q psy10860 33 PEALALLQRQLDVDILISGHTHKFE 57 (91)
Q Consensus 33 ~~~l~~~~~~~~~dvvi~GHtH~~~ 57 (91)
.+...++.+..+.+.+|-||+-.+.
T Consensus 222 ~~~~~~fl~~n~l~~iir~Hq~~~~ 246 (309)
T 2ie4_C 222 QDISETFNHANGLTLVSRAHQLVME 246 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTE
T ss_pred HHHHHHHHHHcCCeEEEecCcceeC
Confidence 4566778889999999999998864
No 147
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=20.39 E-value=68 Score=23.49 Aligned_cols=19 Identities=26% Similarity=0.253 Sum_probs=15.8
Q ss_pred HHHHHHhhCCCCEEEEcCc
Q psy10860 35 ALALLQRQLDVDILISGHT 53 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHt 53 (91)
.+.+.+++.++|.|..||+
T Consensus 112 ~l~e~A~e~Gad~IAtGht 130 (455)
T 1k92_A 112 MLVAAMKEDGVNIWGDGST 130 (455)
T ss_dssp HHHHHHHHTTCCEEECCCC
T ss_pred HHHHHHHHcCCCEEEECCc
Confidence 3556777889999999998
No 148
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=20.35 E-value=21 Score=19.72 Aligned_cols=10 Identities=40% Similarity=0.806 Sum_probs=0.0
Q ss_pred EEEEccCCcC
Q psy10860 64 KFYINPGSAT 73 (91)
Q Consensus 64 ~~~iNPGS~~ 73 (91)
..+|.|||++
T Consensus 63 ~~litpg~a~ 72 (74)
T 2zxe_G 63 QHLLQPGEAT 72 (74)
T ss_dssp ----------
T ss_pred ccccccCccC
Confidence 3688899976
No 149
>4erh_A Outer membrane protein A; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.52A {Salmonella enterica subsp}
Probab=20.20 E-value=61 Score=19.32 Aligned_cols=13 Identities=23% Similarity=0.537 Sum_probs=10.4
Q ss_pred CCCEEEEcCccCc
Q psy10860 44 DVDILISGHTHKF 56 (91)
Q Consensus 44 ~~dvvi~GHtH~~ 56 (91)
...|.|.|||-..
T Consensus 55 ~~~i~I~GhtD~~ 67 (148)
T 4erh_A 55 DGSVVVLGFTDRI 67 (148)
T ss_dssp TCEEEEEEECCTT
T ss_pred CcEEEEEEECCCC
Confidence 4679999999763
No 150
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=20.04 E-value=59 Score=23.19 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=16.3
Q ss_pred HHHHHHhhCCCCEEEEcCcc
Q psy10860 35 ALALLQRQLDVDILISGHTH 54 (91)
Q Consensus 35 ~l~~~~~~~~~dvvi~GHtH 54 (91)
.+.+.+++.++++|+.||+=
T Consensus 98 ~L~~~A~~~G~~~IatG~~~ 117 (400)
T 1kor_A 98 HLVRIAEEEGAEAIAHGATG 117 (400)
T ss_dssp HHHHHHHHHTCSEEECCCCT
T ss_pred HHHHHHHHcCCCEEEECCCC
Confidence 45567778899999999985
Done!