Query psy10865
Match_columns 667
No_of_seqs 487 out of 1324
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 20:24:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10865.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10865hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2952|consensus 100.0 1.8E-81 3.9E-86 641.7 17.0 259 395-666 15-280 (351)
2 COG5035 CDC50 Cell cycle contr 100.0 3.6E-72 7.9E-77 558.7 12.5 268 387-666 7-301 (372)
3 PF03381 CDC50: LEM3 (ligand-e 100.0 1.4E-55 3E-60 458.3 14.7 204 443-666 1-214 (278)
4 TIGR00859 ENaC sodium channel 100.0 8E-34 1.7E-38 323.9 15.6 297 87-435 201-511 (595)
5 TIGR00867 deg-1 degenerin. Thi 100.0 5.3E-33 1.2E-37 315.3 19.1 273 103-430 301-588 (601)
6 PF00858 ASC: Amiloride-sensit 100.0 2.4E-31 5.1E-36 294.4 12.2 226 102-374 153-389 (439)
7 KOG4294|consensus 99.9 3E-27 6.6E-32 268.4 18.7 284 99-435 172-466 (520)
8 TIGR00867 deg-1 degenerin. Thi 97.3 0.00017 3.6E-09 83.4 4.2 51 50-102 348-398 (601)
9 TIGR00859 ENaC sodium channel 97.2 0.00029 6.3E-09 81.7 4.6 67 33-102 245-315 (595)
10 PF00858 ASC: Amiloride-sensit 96.1 0.0037 8E-08 69.3 3.0 55 44-99 183-239 (439)
11 KOG4294|consensus 81.8 1.6 3.4E-05 49.9 4.5 52 44-98 219-272 (520)
12 PF12273 RCR: Chitin synthesis 43.5 19 0.00042 33.3 2.6 24 423-446 1-24 (130)
13 PF04835 Pox_A9: A9 protein co 33.2 47 0.001 25.9 2.8 27 425-451 25-51 (54)
14 PF05915 DUF872: Eukaryotic pr 31.4 44 0.00096 30.5 2.9 25 422-446 43-67 (115)
15 PF09788 Tmemb_55A: Transmembr 26.0 49 0.0011 34.2 2.4 25 422-446 194-218 (256)
16 PF04491 Pox_T4_N: Poxvirus T4 24.2 61 0.0013 24.4 1.9 12 187-198 34-45 (46)
17 PF08114 PMP1_2: ATPase proteo 24.0 66 0.0014 23.7 2.1 20 422-441 7-26 (43)
18 PF10164 DUF2367: Uncharacteri 24.0 60 0.0013 28.6 2.2 20 430-449 69-88 (98)
19 PRK02935 hypothetical protein; 22.7 75 0.0016 28.4 2.6 25 421-445 35-59 (110)
20 PF13038 DUF3899: Domain of un 20.3 80 0.0017 27.2 2.4 24 428-451 4-27 (92)
No 1
>KOG2952|consensus
Probab=100.00 E-value=1.8e-81 Score=641.71 Aligned_cols=259 Identities=44% Similarity=0.798 Sum_probs=226.8
Q ss_pred ccccccCCCcCCccccccCcceeeeccCccchhHHHHHHHHHHHHHHhhhheeCceEEEEeecccccCCCCCCcchhhhh
Q psy10865 395 SNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQPDKTCAQII 474 (667)
Q Consensus 395 ~~~~~~~~p~~t~f~QQ~L~aw~PilTp~~v~~~~~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~~~~~~~~~~~~~~~ 474 (667)
..+.+++||++++|+|||||||||+|||++||++||++|++|||||++++++|++|+|++++|++|...+. +..+++++
T Consensus 15 ~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YTdc~~~~~-~~~~~~~~ 93 (351)
T KOG2952|consen 15 GNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYTDCIPTGF-RTNPSEYI 93 (351)
T ss_pred chhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEecccCccccc-cccchhhh
Confidence 45778999999999999999999999999999999999999999999999999999999999999987653 55666666
Q ss_pred ccCCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCcccccCCCCC-CCCCCCCcccc----ccccccchh
Q psy10865 475 NNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATHSF-NLLQPCTLAMY----LSVAPCGAI 549 (667)
Q Consensus 475 ~~~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~QL~G~~~~-~~~~~C~P~~~----~~i~PCGli 549 (667)
+....+.+.|+++|+||++|++|||+||+|+||||||||||+|||++||+|+... ...+.|+|+.+ ++|+|||||
T Consensus 94 ~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kpi~PCGlI 173 (351)
T KOG2952|consen 94 QGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKPIYPCGLI 173 (351)
T ss_pred hcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCceeeecchh
Confidence 6544455889999999999999999999999999999999999999999998764 34456999987 899999999
Q ss_pred hhcccccceeecc-C-CCceeccccccCCCcccccccCCCCCCCChhhhccCCCCCcccccccccCCCCCCCCCCCCchh
Q psy10865 550 ANSLFSDSFKIFN-D-KNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNED 627 (667)
Q Consensus 550 A~S~FNDtf~l~~-~-~~~~~~~~~~gIaw~sD~~~kf~~p~~~~~~~~~~~~~~p~~w~~~~~~~~~~~~~~~g~~ne~ 627 (667)
|||||||||++.+ + +...++++++||||++|+ +||+||.. +.+++++||+|+++.++.+..++.-.+++||+
T Consensus 174 AnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~-----n~~~~~pPpnW~k~~~~gg~~d~n~pl~~ned 247 (351)
T KOG2952|consen 174 ANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIY-----NASGIVPPPNWQKGYPEGGYTDDNIPLSENED 247 (351)
T ss_pred cchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCC-----ccccccCCccccccCCcCCcCCCCCCchhhHH
Confidence 9999999999976 2 222789999999999999 79999862 33789999999999877641122112699999
Q ss_pred HHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865 628 FIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK 666 (667)
Q Consensus 628 fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~ 666 (667)
||||||+||||+||||||||+. ++|++|+|+++
T Consensus 248 fivWMRtAAlPtFrKLy~~i~~------~gL~~G~y~l~ 280 (351)
T KOG2952|consen 248 FIVWMRTAALPTFRKLYRIIES------NGLPKGTYQLN 280 (351)
T ss_pred HHHHHHhcccchHHHHHhhhcc------CCCCCceEEEE
Confidence 9999999999999999999995 68999999885
No 2
>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-72 Score=558.66 Aligned_cols=268 Identities=35% Similarity=0.618 Sum_probs=223.9
Q ss_pred CCCcccccccccccCCCcCCccccccCcceeeeccCccchhHHHHHHHHHHHHHHhhhheeCceEEEEeecccccCCCC-
Q psy10865 387 DEPDIVLNSNQKQNYKPKESAFNQQKLPAWQPILTAGTVMPAFFTFGLFFIPIGVGLVYFADNVKELSLDYTHCLSVEQ- 465 (667)
Q Consensus 387 d~~~~~~~~~~~~~~~p~~t~f~QQ~L~aw~PilTp~~v~~~~~~ig~ifi~iGi~~~~~s~~v~E~~i~Y~~~~~~~~- 465 (667)
+....+.+....++|||.+++|+|||||||||+|||++|+++||+||++|.|||+.+++++.+|+|++|+|++|...+.
T Consensus 7 ~~~~~~sk~~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Ytdc~t~as~ 86 (372)
T COG5035 7 DKKAIVSKPSLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYTDCMTLASD 86 (372)
T ss_pred cccccccCcccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeecccccccccch
Confidence 3344444556778999999999999999999999999999999999999999999999999999999999999987652
Q ss_pred -----CCcch---------hhhhcc----CCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCcccccCCC
Q psy10865 466 -----PDKTC---------AQIINN----SRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQLTATH 527 (667)
Q Consensus 466 -----~~~~~---------~~~~~~----~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~QL~G~~ 527 (667)
|.++. ....|. ...+..+|++.|++|++||.|||+||+|+|||||||||++|.|.+||+|+.
T Consensus 87 ~f~~iPs~~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~ 166 (372)
T COG5035 87 EFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEA 166 (372)
T ss_pred hhhhCchhheeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCcc
Confidence 11111 112231 122346899999999999999999999999999999999999999999998
Q ss_pred CC--CCCCCCCcccc---ccccccchhhhcccccceeecc---CCCceeccccccCCCcccccccCCCCCCCChhhhccC
Q psy10865 528 SF--NLLQPCTLAMY---LSVAPCGAIANSLFSDSFKIFN---DKNKEVPVLRTGIAWPSDKAVKFHNPPGPDLKEAFKN 599 (667)
Q Consensus 528 ~~--~~~~~C~P~~~---~~i~PCGliA~S~FNDtf~l~~---~~~~~~~~~~~gIaw~sD~~~kf~~p~~~~~~~~~~~ 599 (667)
.. +..+.|+|+.+ |+||||||||||||||||+... ++..++.|+.+||||.+|++ +||++. ++.++
T Consensus 167 ~~~~~l~~nC~PL~~nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr~-rykktk-----Yn~sd 240 (372)
T COG5035 167 LKSDDLKSNCKPLSYNEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDRH-RYKKTK-----YNASD 240 (372)
T ss_pred cccccccccCCcccccCCCeeecccccccccccccchhhccccccccccccccCCccchhhcc-cccCCC-----CChhh
Confidence 76 33468999988 9999999999999999998865 25567999999999999998 799764 45678
Q ss_pred CCCCcccccccccCCCCCCCCCCCCchhHHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865 600 FAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK 666 (667)
Q Consensus 600 ~~~p~~w~~~~~~~~~~~~~~~g~~ne~fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~ 666 (667)
+|+||+|.+++-.--.++-.|+...||.|+||||+||||+|+||++|.. +++|++|+|+++
T Consensus 241 IvpPPnW~k~ypdGYtd~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~------~d~l~~G~Y~ln 301 (372)
T COG5035 241 IVPPPNWAKMYPDGYTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNV------NDVLPPGTYQLN 301 (372)
T ss_pred cCCCCchHhhCCCCCCccCCCcchhHHHHHHHhhcccCchHHHHhcccc------cccCCCceEEEE
Confidence 9999999876411001122467889999999999999999999999966 379999999986
No 3
>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function. They have predicted transmembrane helices.; GO: 0016020 membrane
Probab=100.00 E-value=1.4e-55 Score=458.26 Aligned_cols=204 Identities=43% Similarity=0.785 Sum_probs=166.5
Q ss_pred hhheeCceEEEEeecccccCCCCCCcchhhhhccCCCCCceeEEEEEeccccccceEEEEEecchhhhhhhhhcCCCccc
Q psy10865 443 LVYFADNVKELSLDYTHCLSVEQPDKTCAQIINNSRQMNCTCELQFALSEEIEGNVYIYYGLTNFYQNHRRYVKSRDDLQ 522 (667)
Q Consensus 443 ~~~~s~~v~E~~i~Y~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~f~i~~~m~~pvy~YY~L~nFyQNhrryv~S~s~~Q 522 (667)
|++++++|+|++++||++..... + .........++|.++|+||++|++||||||+|+|||||||||++|||++|
T Consensus 1 ll~~s~~v~E~~~~Yd~~~~~~~-~-----~~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~Q 74 (278)
T PF03381_consen 1 LLVASNSVVEIEIRYDDCCDCQN-C-----YINEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQ 74 (278)
T ss_pred CEEEeCCEEEEEEECCCCCCCCC-c-----cccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHH
Confidence 57899999999999999864322 1 11111223369999999999999999999999999999999999999999
Q ss_pred ccCCCCC-CCCCCCCcccc------ccccccchhhhcccccceeecc---CCCceeccccccCCCcccccccCCCCCCCC
Q psy10865 523 LTATHSF-NLLQPCTLAMY------LSVAPCGAIANSLFSDSFKIFN---DKNKEVPVLRTGIAWPSDKAVKFHNPPGPD 592 (667)
Q Consensus 523 L~G~~~~-~~~~~C~P~~~------~~i~PCGliA~S~FNDtf~l~~---~~~~~~~~~~~gIaw~sD~~~kf~~p~~~~ 592 (667)
|.|+..+ ...++|+|+.+ ++++||||||||||||||+|.+ .....++|+++||||++|++.+||+|..
T Consensus 75 L~G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~-- 152 (278)
T PF03381_consen 75 LKGKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHY-- 152 (278)
T ss_pred hCCCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCC--
Confidence 9999854 33579999976 7899999999999999999974 1456789999999999999889998752
Q ss_pred hhhhccCCCCCcccccccccCCCCCCCCCCCCchhHHHHHhhCCCCchhheeeeeeccccCcCCCCCCeeEEec
Q psy10865 593 LKEAFKNFAKPTDWKKNIWELDPENPDNNGFQNEDFIVWMRTAALPNFRKLYRRVNHEVEGYKSGLPAVKIKKK 666 (667)
Q Consensus 593 ~~~~~~~~~~p~~w~~~~~~~~~~~~~~~g~~ne~fivWMr~aalp~FrKLyg~i~~~~~~~~~~L~~G~Y~i~ 666 (667)
..++.++|++|.. .++.+ ...|+..+|||||||||+||||+||||||||+. ++|++|+|+|+
T Consensus 153 ---~~~~~~~~~~W~~-~~~~~--~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~------~~L~~G~y~i~ 214 (278)
T PF03381_consen 153 ---NNSNTVPPPNWRP-GYEND--TPWPDNSENEHFIVWMRPAALPTFRKLYGRIDN------DDLPAGNYTID 214 (278)
T ss_pred ---ccccccCCCceee-eccCC--CCCCcccccHHHHHHhccccCCCeeEeEeeecc------CCCCCceEEEE
Confidence 2335789999953 22222 223455589999999999999999999999942 39999999985
No 4
>TIGR00859 ENaC sodium channel transporter. This model is designed from the vertebrate members of the ENaC family.
Probab=100.00 E-value=8e-34 Score=323.91 Aligned_cols=297 Identities=14% Similarity=0.150 Sum_probs=212.3
Q ss_pred eeCCccccccccccCCccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCC
Q psy10865 87 LTTPSLVLKPYRDLLPPAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGA 164 (667)
Q Consensus 87 lh~p~~~p~~~~q~l~~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~ 164 (667)
+|..+.+-++..+++..+.+.|++|.. +++|.-|. . .++. .......|+||+||.+...-.|++.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~g~~~~dmi~~C~f~g~~C~-------~--~nFt--~~~T~~yG~CyTFN~~~~~~~~~~~~~ 269 (595)
T TIGR00859 201 FHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCD-------A--RNFT--HFHHPMYGNCYTFNSGENSNLLTSSMP 269 (595)
T ss_pred cchhhhhhhcCHHHHHHhcCCHHHheeeeeECCeECC-------c--ccCe--EEEcCCCccEEeccCCCCCCcceecCC
Confidence 344344555677788899999999943 33443222 0 0110 111235899999999875556788899
Q ss_pred CCCCceEEEEeccccccccCCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccC
Q psy10865 165 GRHLGLTVVLDANIEEYFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLF 244 (667)
Q Consensus 165 G~~~GL~lvL~~~~~dy~~~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f 244 (667)
|..+||+|+|+++++||.+.....+||||+||+|+|+|++++.|+.|+||++++|+|++..+ +.++++||+|.+
T Consensus 270 G~~~GL~LvL~i~q~ey~p~~~~~aGfkV~IH~p~e~P~~~~~G~~V~PG~~T~I~i~~~~~------~~L~~p~~~C~~ 343 (595)
T TIGR00859 270 GAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPGTETSISMQEDEL------QRLGGPYGDCTE 343 (595)
T ss_pred CccCceEEEEecchhhccccccCCCceEEEEeCCCCCCcccccceecCCCcEEEEEEEhhhh------hhcCCCCCCCcC
Confidence 99999999999999999876555899999999999999999999999999999999999875 447899999999
Q ss_pred Cccc---cccccccccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCcc-cHHHHHHHHHHHhhcccccccccc
Q psy10865 245 NKER---ALRFYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTD-CADKAKLAMEMRLSQNLSNISKIF 320 (667)
Q Consensus 245 ~~E~---~L~~f~~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l~-Cl~~~~~~~~~~~~~~~~ni~~~~ 320 (667)
.++. .+.|+..||++||+.||+++++++.|||++++||+..+.++|++.++. |+........ ..
T Consensus 344 ~~~~l~~~~~y~~~YS~~nC~~eC~~~~~~~~CgC~~~~mP~~~~~~~C~~~~~~~c~~c~~~~~~-~~----------- 411 (595)
T TIGR00859 344 NGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPDWAYCYYKLYA-EF----------- 411 (595)
T ss_pred CCCCCccccccCcccCHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCCcCCccccccHHHHHHHHHH-Hh-----------
Confidence 7642 234566999999999999999999999999999988889999998864 3332222111 00
Q ss_pred cCCCCCCCCCCCCCCCceEEEeEEEeeecCCChhhhhcccc---ccC----HHHHhhcccccccCCCCCCCCCCCCcccc
Q psy10865 321 NDTTQKPNCGCLPGCFSLGYSKTQSSSTLAENPRIKKRYLA---GKS----LEYFRMASTSIVTESTPAVANHDEPDIVL 393 (667)
Q Consensus 321 ~~~~~~~~C~Clp~C~~~~Y~~~~S~s~lps~~~~~~~~~~---~~s----~~y~~~n~~~~~~~~~~~~~~~d~~~~~~ 393 (667)
........|.|+|+|+++.|.+++|++.||+... .+|+. +.+ .+|+|+|.+.+
T Consensus 412 ~~~~~~c~C~C~~~C~~~~Y~~~iS~a~~ps~~~--~~~l~~~~~~~~~~~~~~~r~n~~~l------------------ 471 (595)
T TIGR00859 412 DQEELGCFSVCREPCNFTEYKLTLSMARWPSAAS--EDWLLHVLSRQNEYNITLIRNGIAKL------------------ 471 (595)
T ss_pred hhhcccccCCCCCCcCceeeeeEEEeccCcchhh--HHHHHHhhccchhhhhhhcccceEEE------------------
Confidence 0001123589999999999999999999998732 34442 222 24444443331
Q ss_pred cccccccCCCcCCccccccCcceeeecc-CccchhHHHHHHHH
Q psy10865 394 NSNQKQNYKPKESAFNQQKLPAWQPILT-AGTVMPAFFTFGLF 435 (667)
Q Consensus 394 ~~~~~~~~~p~~t~f~QQ~L~aw~PilT-p~~v~~~~~~ig~i 435 (667)
....+......++|.+.-.|--+|. -+..+.+|+-+++|
T Consensus 472 ---~Iyf~el~y~~i~q~~~y~~~~LLsdiGG~lGLfmG~SvL 511 (595)
T TIGR00859 472 ---NIFFEELNYRTIEESPAYNVVTLLSNLGGQMGLWMGASVL 511 (595)
T ss_pred ---EEEeecceeEEEEEecccCHHHHHHHHHhHHHHHHhhHHH
Confidence 2334445566677777777765555 45555555544443
No 5
>TIGR00867 deg-1 degenerin. This model is designed from the invertebrate members of the ENaC family.
Probab=100.00 E-value=5.3e-33 Score=315.33 Aligned_cols=273 Identities=18% Similarity=0.221 Sum_probs=204.2
Q ss_pred ccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEeccccc
Q psy10865 103 PAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDANIEE 180 (667)
Q Consensus 103 ~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~~~~d 180 (667)
.+.+.|++|.. +++|.-|.-. .++. ...+.++|+|||||.+.. ..+++.++|+.+||+|+|+++++|
T Consensus 301 ~lg~~~~Dmi~~C~f~G~~C~c~--------~nFt--~~~~~~yGnCyTFN~~~~-~~l~~~~~G~~~GL~LvLni~q~E 369 (601)
T TIGR00867 301 ALSYTKSELILKCSFNGKPCDID--------RDFT--LHIDPTFGNCYTFNYNRS-VNLTSSRAGPMYGLRLLLFVNQSD 369 (601)
T ss_pred HhCCCHHHhhhcceECCeECCCc--------ccCc--EEecCCCCCeEEECCCCC-CcceeccCccCCceEEEEecchhh
Confidence 57888998843 5566644300 0110 012345899999998753 345667889999999999999999
Q ss_pred cccCCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccCCcccccccc--ccccH
Q psy10865 181 YFCSSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFY--RHYTQ 258 (667)
Q Consensus 181 y~~~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f~~E~~L~~f--~~YS~ 258 (667)
|++.. ..+||||+||+|+|+|+++..|+.|+||++++|+|++..+.+ +++++|+|.+.+|..+.|| ..||+
T Consensus 370 Y~p~~-~~aGfKVlIH~p~E~P~pd~~G~~v~pG~~T~I~I~~~~~~~------Lp~pyg~C~~~~e~~~~~y~~~~YS~ 442 (601)
T TIGR00867 370 YLPTT-EAAGVRLTVHDKDEFPFPDTFGYSAPTGFISSFGIKLKQMVR------LPAPYGDCVDTGKTSDYIYKGYAYSP 442 (601)
T ss_pred ccCCC-CCCcEEEEEeCCCCCccccccceecCCCcEEEEEEeeeeeee------cCCCCCCcCCCCccccccCCCCcCCH
Confidence 99754 579999999999999999999999999999999999988876 6889999999988877777 69999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCC---CcccHHHHHHHHHHHhhcccccccccccCCCCCCCCCCCCCC
Q psy10865 259 RNCILECEANFTLSFCQCVMYFMPKDRFTRICGKK---DTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLPGC 335 (667)
Q Consensus 259 ~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~---~l~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~Clp~C 335 (667)
+||++||+++++++.|||+++.||...+.++|++. ++.|+.++...+... ......|+|+|+|
T Consensus 443 ~nC~~EC~~~~vlk~CGC~~~~~P~~~~~~~C~~~~~~~~~Cl~~~~~~~~~~--------------~~~~~~C~C~~pC 508 (601)
T TIGR00867 443 EGCHRSCFQKLIIAKCGCGDPRFPVPEGSRHCQAFNKTDRECLENLTGDLGEL--------------HHKIFKCRCKQPC 508 (601)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCCcCCCCCCcCCCCccchhhHHHHHHHHhhhh--------------hccCCCCCCCCCc
Confidence 99999999999999999999999998888999964 579998776544210 0112579999999
Q ss_pred CceEEEeEEEeeecCCChhhhhcccc-------ccCHHHHhhcccccccCCCCCCCCCCCCcccccccccccCCCcCCcc
Q psy10865 336 FSLGYSKTQSSSTLAENPRIKKRYLA-------GKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAF 408 (667)
Q Consensus 336 ~~~~Y~~~~S~s~lps~~~~~~~~~~-------~~s~~y~~~n~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~p~~t~f 408 (667)
+++.|.+++|++.||+.... ..+. +...+|+|+|.+.+ ....+......+
T Consensus 509 ~~~~Y~~~iS~a~~ps~s~~--~~l~~~~~~~~~~~~~~~r~N~~~l---------------------~Vyyeel~y~~i 565 (601)
T TIGR00867 509 QESIYTVTYSAAKWPSGSLY--IDLGSCDLNTASECNEYYRENAAMI---------------------EVFYEQLNYELL 565 (601)
T ss_pred cccEEeeEeecccCcchhhh--hhhhcccccccchhhhhhccceEEE---------------------EEEeccceeEEE
Confidence 99999999999999976322 1111 12244555444331 234555566777
Q ss_pred ccccCcceeeecc-CccchhHHH
Q psy10865 409 NQQKLPAWQPILT-AGTVMPAFF 430 (667)
Q Consensus 409 ~QQ~L~aw~PilT-p~~v~~~~~ 430 (667)
+|.+.-.|--+|. -+..+.+|+
T Consensus 566 ~q~~~y~~~~LLSdiGG~lGLfl 588 (601)
T TIGR00867 566 TESEAYGLVNLLADFGGQLGLWL 588 (601)
T ss_pred EeecccCHHHHHHHhhhHHHHHH
Confidence 7777766654444 344444444
No 6
>PF00858 ASC: Amiloride-sensitive sodium channel; InterPro: IPR001873 The apical membrane of many tight epithelia contains sodium channels that are primarily characterised by their high affinity to the diuretic blocker amiloride [, , , ]. These channels mediate the first step of active sodium reabsorption essential for the maintenance of body salt and water homeostasis []. In vertebrates, the channels control reabsorption of sodium in kidney, colon, lung and sweat glands; they also play a role in taste perception. Members of the epithelial Na+ channel (ENaC) family fall into four subfamilies, termed alpha, beta, gamma and delta []. The proteins exhibit the same apparent topology, each with two transmembrane (TM) spanning segments, separated by a large extracellular loop. In most ENaC proteins studied to date, the extracellular domains are highly conserved and contain numerous cysteine residues, with flanking C-terminal amphipathic TM regions, postulated to contribute to the formation of the hydrophilic pores of the oligomeric channel protein complexes. It is thought that the well-conserved extracellular domains serve as receptors to control the activities of the channels. Vertebrate ENaC proteins are similar to degenerins of Caenorhabditis elegans []: deg-1, del-1, mec-4, mec-10 and unc-8. These proteins can be mutated to cause neuronal degradation, and are also thought to form sodium channels. Structurally, the proteins that belong to this family consist of about 510 to 920 amino acid residues. They are made of an intracellular N terminus region followed by a transmembrane domain, a large extracellular loop, a second transmembrane segment and a C-terminal intracellular tail [].; GO: 0005272 sodium channel activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 2QTS_B 3S3W_C 3IJ4_A 3S3X_A 3HGC_A 2K2B_A.
Probab=99.97 E-value=2.4e-31 Score=294.39 Aligned_cols=226 Identities=28% Similarity=0.517 Sum_probs=155.1
Q ss_pred Ccccc-CCcCe---eecCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEecc
Q psy10865 102 PPAIL-NCANV---CLTRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDAN 177 (667)
Q Consensus 102 ~~a~~-~C~~i---~~T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~~ 177 (667)
+.... .|..+ ..|+.|+||+||.... +...+|+++..+|..+||+|+|+.+
T Consensus 153 ~~~~~~~c~~~~~~~~t~~G~C~tfn~~~~-------------------------~~~~~~~~~~~~g~~~gL~l~l~~~ 207 (439)
T PF00858_consen 153 NGKPCDCCEDFFRFVHTEYGNCYTFNSLNS-------------------------DNNSYPLRQSRSGPGNGLSLVLNVN 207 (439)
T ss_dssp TTEE---GGGEEEE-EETTEEEEEET-SS---------------------------SSSS--EE-SSSGGGSEEEEEE--
T ss_pred cCCccccHHHhhhcccccCceeeeccCccc-------------------------ccccceeeeeccCcccccceeeccc
Confidence 34445 37776 3789999999987532 2346788999999999999999999
Q ss_pred cccccc--CCCcCcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCCCCcccCCcccccccc-c
Q psy10865 178 IEEYFC--SSEASYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPELRQCLFNKERALRFY-R 254 (667)
Q Consensus 178 ~~dy~~--~~~~~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~~R~C~f~~E~~L~~f-~ 254 (667)
++||.. .....+||+|+||+|+++|.+++.|+.|+||.++.|+|++..+.. +++++|+|++++|..+.|+ .
T Consensus 208 ~~~~~~~~~~~~~~G~~v~ih~~~~~p~~~~~~~~v~~g~~~~i~v~~~~~~~------l~~~~r~C~~~~e~~l~~~~~ 281 (439)
T PF00858_consen 208 QDDYLYDPGTTSSAGFKVYIHDPGEYPFIESNGISVPPGSETSISVKPTRISR------LPPPYRQCYFDDENNLYYFNS 281 (439)
T ss_dssp GGGS----S--TSBSEEEEEE-TTS---HHHH-EEE-TTEEEEEEEEEEEEE---------TTTSSEB-SSSSBSSSS--
T ss_pred ceeeecccccccchhheeecCCcccccchhccccccccceEEEEEeeccchhc------cCCCCCCCcCCcccccccccc
Confidence 999983 332236999999999999999999999999999999999998873 7899999999999988876 8
Q ss_pred cccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCc-ccHHHHHHHHHHHhhcccccccccccCCCCCCCCCCCC
Q psy10865 255 HYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDT-DCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGCLP 333 (667)
Q Consensus 255 ~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l-~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~Clp 333 (667)
.||+++|+.+|+++++++.|||++++| ...+.++|++.++ .|+.++...+.. ........|+|+|
T Consensus 282 ~Ys~~~C~~~C~~~~~~~~C~C~~~~~-~~~~~~~C~~~~~~~Cl~~~~~~~~~-------------~~~~~~~~C~C~~ 347 (439)
T PF00858_consen 282 IYSYSNCLLECRQKYILKKCGCVPPFY-PNNNVPYCTLSDLLECLQKNYDKFNS-------------SWEEDGNSCDCLP 347 (439)
T ss_dssp S--HHHHHHHHHHHHHHHHHSSB-TTS---SSS-B--HHHHHHTHHHHHHHHH----------------HT-SSSS---E
T ss_pred ccChHHHHHHHHHHHHHHhCCCCCccc-cccCCCcCCchhhhhHHHHHHHHhhh-------------cccccccCCCCCC
Confidence 999999999999999999999999999 5556899999998 999988877631 0113457899999
Q ss_pred CCCceEEEeEEEeeecCCChhhhhccc---cccCHHHHhhcccc
Q psy10865 334 GCFSLGYSKTQSSSTLAENPRIKKRYL---AGKSLEYFRMASTS 374 (667)
Q Consensus 334 ~C~~~~Y~~~~S~s~lps~~~~~~~~~---~~~s~~y~~~n~~~ 374 (667)
+|+++.|.+++|++.||+.... .++ .+.+.++++++.+.
T Consensus 348 ~C~~~~Y~~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 389 (439)
T PF00858_consen 348 PCNETSYSVSVSYSSLPSKSFQ--KWLSNSFNKSEDYIRDNLAV 389 (439)
T ss_dssp BSEEEEEEEEEEEEESS-CCCH--HHHHHHTT--HHHHHHHEEE
T ss_pred chhhhcccccccccccccccch--hhhhccccccccccccchhh
Confidence 9999999999999999987322 222 15667777777765
No 7
>KOG4294|consensus
Probab=99.95 E-value=3e-27 Score=268.44 Aligned_cols=284 Identities=23% Similarity=0.345 Sum_probs=206.9
Q ss_pred ccCCccccCCcCeee--cCCceeeeeeeeecceeeecccccccccCCCCCCCCCCCCCCCCCcccCCCCCCCceEEEEec
Q psy10865 99 DLLPPAILNCANVCL--TRSALCAFIVTIRRGIVYWNVRRTLRLDWTLENDFPENAPVDSIPWRPWGAGRHLGLTVVLDA 176 (667)
Q Consensus 99 q~l~~a~~~C~~i~~--T~~G~Cc~FN~~~~~~~~~~~~~~~~~~W~~~~gY~~n~~~~~~P~r~~~~G~~~GL~lvL~~ 176 (667)
+++-.+.++|.++.. .++|..|. +-..... ..-.+|+||++|...+...+....+|..+||+++|++
T Consensus 172 ~~~~~~~~~~~~~~~~C~f~g~~~~-~~~~~~~----------~~t~~G~C~tfN~~~~~~~~~~~~~g~~~GL~~~l~~ 240 (520)
T KOG4294|consen 172 EFLMSLSYSCDDLILSCSFNGKPCD-CCKFFTP----------IFTEYGNCYTFNSSNKEGKYTSSRAGTGYGLRVMLDV 240 (520)
T ss_pred HHHHHhCCCHHHHHHhCCcCCeeCC-chhccee----------ccCCCcceeEecCcCccccccccCCcccCceEEEEEc
Confidence 344466777777722 45555333 2111111 1234677888875444445556677889999999999
Q ss_pred cccccccC-CCc-CcceEEEeeCCCCCCccccCceeeCCCCeEEEEEEEEEeecCCcccccCCC-CCcccCCcccc--cc
Q psy10865 177 NIEEYFCS-SEA-SYGFKLLLQNPVETPKLAAFGELISPGRESLIVIKPIINKSNPSIATSDPE-LRQCLFNKERA--LR 251 (667)
Q Consensus 177 ~~~dy~~~-~~~-~~GfkV~IH~p~e~P~~~~~g~~v~pG~~t~i~V~p~~~~~~~~lr~l~p~-~R~C~f~~E~~--L~ 251 (667)
+++||.+. ... .+||+|+||.|.+.|++++.|+.+++|.++.++|++..+.. ++.+ ||+|.+.+|.. +.
T Consensus 241 ~~~~~~p~~~~~~~~g~~v~ih~~~~~p~~~~~~~~~~~~~~s~~~i~~~~~~~------l~~~~~g~C~~~~~~~~~~~ 314 (520)
T KOG4294|consen 241 NQEEYLPGWTESDEAGVRVFIHSPDELPFIDSTGYSVPPGSESSVAVSPTKLTR------LPPPKWGNCLFSGEEVPELY 314 (520)
T ss_pred cccccCCCccccccCceEEEeeCCCCCCCCCCcceecCCCceEEEEEeeeeeee------cCCCCCccccCCCCCCcccc
Confidence 99999994 432 38999999999999999999999999999999999999987 4555 99999998876 67
Q ss_pred ccccccHHHHHHHHHHHHHhhcCCCccccCCCCCCCcCCCCCCcccHHHHHHHHHHHhhcccccccccccCCCCCCCCCC
Q psy10865 252 FYRHYTQRNCILECEANFTLSFCQCVMYFMPKDRFTRICGKKDTDCADKAKLAMEMRLSQNLSNISKIFNDTTQKPNCGC 331 (667)
Q Consensus 252 ~f~~YS~~nC~~eC~~~~~~~~CgCvp~~~P~~~~~~~C~~~~l~Cl~~~~~~~~~~~~~~~~ni~~~~~~~~~~~~C~C 331 (667)
++..||.++|+.+|+++++++.|||+++.+|...+.++|++.++.|+.++..... .......|.|
T Consensus 315 ~~~~Ys~~~C~~~C~~~~~~~~C~C~~~~~~~~~~~~~C~~~~~~C~~~~~~~~~---------------~~~~~~~c~C 379 (520)
T KOG4294|consen 315 YGRIYSLENCLLECRQKYLVKKCGCVPPLYPLPGNVPYCTLEDLLCLDLFLDSVG---------------SKSLNISCVC 379 (520)
T ss_pred cCCCcCHHHHHHHHHHHHHHhcCCCCCccccCCCCCCcCCcchhhhhhhHHHhhc---------------CcCCCCCCCC
Confidence 7889999999999999999999999999999888999999999999998877531 1112223999
Q ss_pred CCCCCceEEEeEEEeeecCCChhhhhcccc---ccCHHHHhhcccccccCCCCCCCCCCCCcccccccccccCCCcCCcc
Q psy10865 332 LPGCFSLGYSKTQSSSTLAENPRIKKRYLA---GKSLEYFRMASTSIVTESTPAVANHDEPDIVLNSNQKQNYKPKESAF 408 (667)
Q Consensus 332 lp~C~~~~Y~~~~S~s~lps~~~~~~~~~~---~~s~~y~~~n~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~p~~t~f 408 (667)
+++|++..|.+++|++.||+.......+.. +....|+++|.+.+. ...+......+
T Consensus 380 ~~~C~~~~y~~~~s~~~~ps~~~~~~~~~~~~~~~~~~~~~~n~~~v~---------------------i~~~~l~y~~~ 438 (520)
T KOG4294|consen 380 PPPCNSTRYSVTLSMAKWPSFSSAVWLGLKPDKNSCEKYIRENRAMVN---------------------IFYEELNYESY 438 (520)
T ss_pred CCCcccceeeeEeecccccccchhhhhhccCChHHHHHHHHhCceEEE---------------------EEhhhcCceee
Confidence 999999999999999999987544222222 223556655554422 22333345556
Q ss_pred ccccCcceeeecc-CccchhHHHHHHHH
Q psy10865 409 NQQKLPAWQPILT-AGTVMPAFFTFGLF 435 (667)
Q Consensus 409 ~QQ~L~aw~PilT-p~~v~~~~~~ig~i 435 (667)
+|...-.|.-+|+ -+..+.+|+.++++
T Consensus 439 ~~~~~~~~~~Lls~~GG~~GLf~G~Sv~ 466 (520)
T KOG4294|consen 439 EQSKAYGFSDLLSDIGGQLGLFLGASVL 466 (520)
T ss_pred ehhhhccHHHHHHHhcchhhhhhhhHHH
Confidence 7777767766666 55555555544443
No 8
>TIGR00867 deg-1 degenerin. This model is designed from the invertebrate members of the ENaC family.
Probab=97.32 E-value=0.00017 Score=83.42 Aligned_cols=51 Identities=22% Similarity=0.232 Sum_probs=43.8
Q ss_pred cCCCcCccccceEEEeccccceeccCCccccCceEEEeeCCccccccccccCC
Q psy10865 50 WRPWGAGRHLGLTVVLDANIEEYFCSSEASYGFKSIVLTTPSLVLKPYRDLLP 102 (667)
Q Consensus 50 ~r~~~~G~~~gl~~~l~~~~~dy~c~~~~~~Gfk~v~lh~p~~~p~~~~q~l~ 102 (667)
.+..++|...||.|+|+++.+||+|++.. +||| |+||.|+|+|.+..+.+.
T Consensus 348 l~~~~~G~~~GL~LvLni~q~EY~p~~~~-aGfK-VlIH~p~E~P~pd~~G~~ 398 (601)
T TIGR00867 348 LTSSRAGPMYGLRLLLFVNQSDYLPTTEA-AGVR-LTVHDKDEFPFPDTFGYS 398 (601)
T ss_pred ceeccCccCCceEEEEecchhhccCCCCC-CcEE-EEEeCCCCCcccccccee
Confidence 44457899999999999999999998764 9999 999999999998776544
No 9
>TIGR00859 ENaC sodium channel transporter. This model is designed from the vertebrate members of the ENaC family.
Probab=97.21 E-value=0.00029 Score=81.68 Aligned_cols=67 Identities=18% Similarity=0.111 Sum_probs=51.6
Q ss_pred CCCCCC--CCCCCCCCCCccCCCcCccccceEEEeccccceec--cCCccccCceEEEeeCCccccccccccCC
Q psy10865 33 WTLEND--FPENAPVDSIPWRPWGAGRHLGLTVVLDANIEEYF--CSSEASYGFKSIVLTTPSLVLKPYRDLLP 102 (667)
Q Consensus 33 W~~e~G--Y~~~~~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~--c~~~~~~Gfk~v~lh~p~~~p~~~~q~l~ 102 (667)
||++.| |.-+.+...-.+++.++|..+||.|+|+.+.+||. |++ ..||| |+||.|+|+|.+..+.+.
T Consensus 245 ~T~~yG~CyTFN~~~~~~~~~~~~~G~~~GL~LvL~i~q~ey~p~~~~--~aGfk-V~IH~p~e~P~~~~~G~~ 315 (595)
T TIGR00859 245 HHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLST--EAGAR-VMVHSQDEPPFIDDLGFG 315 (595)
T ss_pred EcCCCccEEeccCCCCCCcceecCCCccCceEEEEecchhhccccccC--CCceE-EEEeCCCCCCccccccee
Confidence 444544 44444443334678899999999999999999776 655 39999 999999999999887765
No 10
>PF00858 ASC: Amiloride-sensitive sodium channel; InterPro: IPR001873 The apical membrane of many tight epithelia contains sodium channels that are primarily characterised by their high affinity to the diuretic blocker amiloride [, , , ]. These channels mediate the first step of active sodium reabsorption essential for the maintenance of body salt and water homeostasis []. In vertebrates, the channels control reabsorption of sodium in kidney, colon, lung and sweat glands; they also play a role in taste perception. Members of the epithelial Na+ channel (ENaC) family fall into four subfamilies, termed alpha, beta, gamma and delta []. The proteins exhibit the same apparent topology, each with two transmembrane (TM) spanning segments, separated by a large extracellular loop. In most ENaC proteins studied to date, the extracellular domains are highly conserved and contain numerous cysteine residues, with flanking C-terminal amphipathic TM regions, postulated to contribute to the formation of the hydrophilic pores of the oligomeric channel protein complexes. It is thought that the well-conserved extracellular domains serve as receptors to control the activities of the channels. Vertebrate ENaC proteins are similar to degenerins of Caenorhabditis elegans []: deg-1, del-1, mec-4, mec-10 and unc-8. These proteins can be mutated to cause neuronal degradation, and are also thought to form sodium channels. Structurally, the proteins that belong to this family consist of about 510 to 920 amino acid residues. They are made of an intracellular N terminus region followed by a transmembrane domain, a large extracellular loop, a second transmembrane segment and a C-terminal intracellular tail [].; GO: 0005272 sodium channel activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 2QTS_B 3S3W_C 3IJ4_A 3S3X_A 3HGC_A 2K2B_A.
Probab=96.07 E-value=0.0037 Score=69.32 Aligned_cols=55 Identities=27% Similarity=0.409 Sum_probs=36.2
Q ss_pred CCCCCccCCCcCccccceEEEeccccceec--cCCccccCceEEEeeCCccccccccc
Q psy10865 44 PVDSIPWRPWGAGRHLGLTVVLDANIEEYF--CSSEASYGFKSIVLTTPSLVLKPYRD 99 (667)
Q Consensus 44 ~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~--c~~~~~~Gfk~v~lh~p~~~p~~~~q 99 (667)
+...+|++..++|...||.|+|+.+..||. +......||| |++|.|.++|.+..+
T Consensus 183 ~~~~~~~~~~~~g~~~gL~l~l~~~~~~~~~~~~~~~~~G~~-v~ih~~~~~p~~~~~ 239 (439)
T PF00858_consen 183 DNNSYPLRQSRSGPGNGLSLVLNVNQDDYLYDPGTTSSAGFK-VYIHDPGEYPFIESN 239 (439)
T ss_dssp -SSSS--EE-SSSGGGSEEEEEE--GGGS----S--TSBSEE-EEEE-TTS---HHHH
T ss_pred ccccceeeeeccCcccccceeecccceeeecccccccchhhe-eecCCcccccchhcc
Confidence 457899999999999999999999999888 7665425999 999999999998775
No 11
>KOG4294|consensus
Probab=81.79 E-value=1.6 Score=49.93 Aligned_cols=52 Identities=27% Similarity=0.319 Sum_probs=41.0
Q ss_pred CCCCCccCCCcCccccceEEEeccccceeccCCccc--cCceEEEeeCCcccccccc
Q psy10865 44 PVDSIPWRPWGAGRHLGLTVVLDANIEEYFCSSEAS--YGFKSIVLTTPSLVLKPYR 98 (667)
Q Consensus 44 ~~~~yP~r~~~~G~~~gl~~~l~~~~~dy~c~~~~~--~Gfk~v~lh~p~~~p~~~~ 98 (667)
....|+.+ .+|...||.++|+...+||.-..+.+ .||| |++|.|+++|.+..
T Consensus 219 ~~~~~~~~--~~g~~~GL~~~l~~~~~~~~p~~~~~~~~g~~-v~ih~~~~~p~~~~ 272 (520)
T KOG4294|consen 219 KEGKYTSS--RAGTGYGLRVMLDVNQEEYLPGWTESDEAGVR-VFIHSPDELPFIDS 272 (520)
T ss_pred cccccccc--CCcccCceEEEEEccccccCCCccccccCceE-EEeeCCCCCCCCCC
Confidence 34556666 55558999999999999999843323 7999 99999999999764
No 12
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=43.54 E-value=19 Score=33.31 Aligned_cols=24 Identities=8% Similarity=-0.103 Sum_probs=15.9
Q ss_pred ccchhHHHHHHHHHHHHHHhhhhe
Q psy10865 423 GTVMPAFFTFGLFFIPIGVGLVYF 446 (667)
Q Consensus 423 ~~v~~~~~~ig~ifi~iGi~~~~~ 446 (667)
+||+.++||++|++++|+++++..
T Consensus 1 RW~l~~iii~~i~l~~~~~~~~~r 24 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFYCHNR 24 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHH
Confidence 577777777777666666666543
No 13
>PF04835 Pox_A9: A9 protein conserved region; InterPro: IPR006920 This entry represents a family of Chordopoxvirus A9 proteins. Chordopoxvirus belongs to the family Poxviridae and is the cause of vertebrate infections [].
Probab=33.18 E-value=47 Score=25.90 Aligned_cols=27 Identities=19% Similarity=0.432 Sum_probs=18.7
Q ss_pred chhHHHHHHHHHHHHHHhhhheeCceE
Q psy10865 425 VMPAFFTFGLFFIPIGVGLVYFADNVK 451 (667)
Q Consensus 425 v~~~~~~ig~ifi~iGi~~~~~s~~v~ 451 (667)
|++=.++--++|+.+|+++++.+++-.
T Consensus 25 Viik~vismimylilGi~L~yis~~~~ 51 (54)
T PF04835_consen 25 VIIKSVISMIMYLILGIALIYISSNDD 51 (54)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence 334444455778999999998887643
No 14
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=31.42 E-value=44 Score=30.48 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=19.4
Q ss_pred CccchhHHHHHHHHHHHHHHhhhhe
Q psy10865 422 AGTVMPAFFTFGLFFIPIGVGLVYF 446 (667)
Q Consensus 422 p~~v~~~~~~ig~ifi~iGi~~~~~ 446 (667)
.-....+++++|+++|.+|++++..
T Consensus 43 ~I~la~~Lli~G~~li~~g~l~~~~ 67 (115)
T PF05915_consen 43 SIALAVFLLIFGTVLIIIGLLLFFG 67 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3345567888999999999988774
No 15
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=26.00 E-value=49 Score=34.22 Aligned_cols=25 Identities=36% Similarity=0.558 Sum_probs=20.5
Q ss_pred CccchhHHHHHHHHHHHHHHhhhhe
Q psy10865 422 AGTVMPAFFTFGLFFIPIGVGLVYF 446 (667)
Q Consensus 422 p~~v~~~~~~ig~ifi~iGi~~~~~ 446 (667)
++.-.++||++|++|+++||.+.+.
T Consensus 194 aRkR~i~f~llgllfliiaigltvG 218 (256)
T PF09788_consen 194 ARKRAIIFFLLGLLFLIIAIGLTVG 218 (256)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455788999999999999998654
No 16
>PF04491 Pox_T4_N: Poxvirus T4 protein, N terminus; InterPro: IPR007580 Poxvirus T4 protein is thought to be secreted or retained in the endoplasmic reticulum if the protein also contains an additional C-terminal region (IPR007579 from INTERPRO). M-T4 of myxoma virus (O55698 from SWISSPROT) is thought to protect infected lymphocytes from apoptosis and modulate the inflammatory response to virus infection [].
Probab=24.17 E-value=61 Score=24.44 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=10.0
Q ss_pred cCcceEEEeeCC
Q psy10865 187 ASYGFKLLLQNP 198 (667)
Q Consensus 187 ~~~GfkV~IH~p 198 (667)
..+||||++|+.
T Consensus 34 egNGfki~~hD~ 45 (46)
T PF04491_consen 34 EGNGFKIFAHDE 45 (46)
T ss_pred eCCcEEEEEecc
Confidence 468999999974
No 17
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=24.03 E-value=66 Score=23.72 Aligned_cols=20 Identities=35% Similarity=0.388 Sum_probs=15.3
Q ss_pred CccchhHHHHHHHHHHHHHH
Q psy10865 422 AGTVMPAFFTFGLFFIPIGV 441 (667)
Q Consensus 422 p~~v~~~~~~ig~ifi~iGi 441 (667)
|..||.+|.++|++-++|-.
T Consensus 7 p~GVIlVF~lVglv~i~iva 26 (43)
T PF08114_consen 7 PGGVILVFCLVGLVGIGIVA 26 (43)
T ss_pred CCCeeeehHHHHHHHHHHHH
Confidence 77889999999987764433
No 18
>PF10164 DUF2367: Uncharacterized conserved protein (DUF2367); InterPro: IPR019317 This is a highly conserved set of proteins which contains three pairs of cysteine residues within a length of 42 amino acids and is rich in proline residues towards the N terminus. It includes a membrane protein that has been found to be highly expressed in the mouse brain and consequently, several members have been assigned as brain protein i3 (Bri3). Their function is unknown.
Probab=23.99 E-value=60 Score=28.63 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhhhheeCc
Q psy10865 430 FTFGLFFIPIGVGLVYFADN 449 (667)
Q Consensus 430 ~~ig~ifi~iGi~~~~~s~~ 449 (667)
++.+|+|+||||+..+...+
T Consensus 69 i~~AI~fFPiGilcc~~~r~ 88 (98)
T PF10164_consen 69 ILCAIFFFPIGILCCLAMRE 88 (98)
T ss_pred HHHHHHHHhhHHHHhhhcCc
Confidence 45589999999999886643
No 19
>PRK02935 hypothetical protein; Provisional
Probab=22.69 E-value=75 Score=28.43 Aligned_cols=25 Identities=12% Similarity=0.305 Sum_probs=20.4
Q ss_pred cCccchhHHHHHHHHHHHHHHhhhh
Q psy10865 421 TAGTVMPAFFTFGLFFIPIGVGLVY 445 (667)
Q Consensus 421 Tp~~v~~~~~~ig~ifi~iGi~~~~ 445 (667)
+..+++.+|+++|++++..+.++++
T Consensus 35 ~~~~~m~ifm~~G~l~~l~S~vvYF 59 (110)
T PRK02935 35 ESIIIMTIFMLLGFLAVIASTVVYF 59 (110)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677889999999999988777665
No 20
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=20.33 E-value=80 Score=27.18 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhhhheeCceE
Q psy10865 428 AFFTFGLFFIPIGVGLVYFADNVK 451 (667)
Q Consensus 428 ~~~~ig~ifi~iGi~~~~~s~~v~ 451 (667)
++|++|++++++|.++++.....-
T Consensus 4 ~~Fl~~l~lliig~~~~v~~~GfF 27 (92)
T PF13038_consen 4 ILFLVGLILLIIGGFLFVFQSGFF 27 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCch
Confidence 467999999999999998777653
Done!